Oaf1p gene transcriptions
"In S. cerevisiae, peroxisomal proteins are repressed by glucose and induced by oleate (361). It has been shown that derepression of such proteins is dependent on Adr1 and on the Snf1 complex (320322). Induction by oleate depends on a peroxisome box (110), also called the oleate response element (92), which is an imperfect palindrome including the consensus sequence CGGNNNTNA. There is evidence that the transcription factor binding this sequence is a heterodimer containing the proteins Oaf1 and Oaf2/Pip2, which are both C6 zinc cluster proteins (165, 201, 293)."
Oleate-activated transcription factor 1 is abbreviated Oaf1.

# Human genes

# Interactions

# Consensus sequences
The upstream activating sequence (UAS) for the Oaf1p is CGGN3TNAN9-12.

# Oaf samplings
Copying CGGN3TNAN9-12CCG in "F" yields none between ZSCAN22 and A1BG and none between ZNF497 and A1BG as can be found by the computer programs.
For the Basic programs testing consensus sequence CGGN3TNAN9-12CCG (starting with SuccessablesOaf1.bas) written to compare nucleotide sequences with the sequences on either the template strand (-), or coding strand (+), of the DNA, in the negative direction (-), or the positive direction (+), the programs are, are looking for, and found:
- negative strand, negative direction, looking for CGGN3TNAN12CCG, 1, CGGTCATGAAACCCTCCGACTCCG at 2229.
- positive strand, negative direction, looking for CGGN3TNAN9-12CCG, 0.
- positive strand, positive direction, looking for CGGN3TNAN9CCG, 2, CGGACGTGAGACCGCTCTCCG at 1484, CGGACGTGAGACCGCTCTCCG at 1384.
- negative strand, positive direction, looking for CGGN3TNAN9-12CCG, 0.
- complement, negative strand, negative direction, looking for GCCN3ANTN9-12GGC, 0.
- complement, positive strand, negative direction, looking for GCCN3ANTN12GGC, 1, GCCAGTACTTTGGGAGGCTGAGGC at 2229.
- complement, positive strand, positive direction, looking for GCCN3ANTN9-12GGC, 0.
- complement, negative strand, positive direction, looking for GCCN3ANTN9GGC, 2, GCCTGCACTCTGGCGAGAGGC at 1484, GCCTGCACTCTGGCGAGAGGC at 1384.
- inverse complement, negative strand, negative direction, looking for CGGN9-12TNAN3CCG, 0.
- inverse complement, positive strand, negative direction, looking for CGGN9-12TNAN3CCG, 0.
- inverse complement, positive strand, positive direction, looking for CGGN9-12TNAN3CCG, 0.
- inverse complement, negative strand, positive direction, looking for CGGN9-12TNAN3CCG, 0.
- inverse negative strand, negative direction, looking for GCCN9-12ANTN3GGC, 0.
- inverse positive strand, negative direction, looking for GCCN9-12ANTN3GGC, 0.
- inverse positive strand, positive direction, looking for GCCN9-12ANTN3GGC, 0.
- inverse negative strand, positive direction, looking for GCCN9-12ANTN3GGC, 0.

## Oaf negative direction distal promoters
- Negative strand, negative direction, Oaf4: CGGTCATGAAACCCTCCGACTCCG at 2229.

## Oaf positive direction distal promoters
- Positive strand, positive direction, Oaf1: CGGACGTGAGACCGCTCTCCG at 1484, CGGACGTGAGACCGCTCTCCG at 1384.

# Oaf1 random dataset samplings
- Oaf1r0: 0.
- Oaf1r1: 0.
- Oaf1r2: 0.
- Oaf1r3: 0.
- Oaf1r4: 0.
- Oaf1r5: 1, CGGTGTTAAGCCGGCCCCCCG at 1087.
- Oaf1r6: 0.
- Oaf1r7: 0.
- Oaf1r8: 0.
- Oaf1r9: 0.
- Oaf1r0ci: 1, CGGAGAAAGTCTTTATGTCCG at 3378.
- Oaf1r1ci: 0.
- Oaf1r2ci: 0.
- Oaf1r3ci: 0.
- Oaf1r4ci: 0.
- Oaf1r5ci: 0.
- Oaf1r6ci: 1, CGGTAGGGCAGCTTATTCCCG at 1492.
- Oaf1r7ci: 0.
- Oaf1r8ci: 0.
- Oaf1r9ci: 0.

# Oaf2 random dataset samplings
- Oaf2r0: 1, CGGCGATGAACTAGGCGCGCCG at 3240.
- Oaf2r1: 0.
- Oaf2r2: 0.
- Oaf2r3: 0.
- Oaf2r4: 0.
- Oaf2r5: 0.
- Oaf2r6: 0.
- Oaf2r7: 0.
- Oaf2r8: 0.
- Oaf2r9: 0.
- Oaf2r0ci: 0.
- Oaf2r1ci: 0.
- Oaf2r2ci: 0.
- Oaf2r3ci: 0.
- Oaf2r4ci: 0.
- Oaf2r5ci: 0.
- Oaf2r6ci: 0.
- Oaf2r7ci: 0.
- Oaf2r8ci: 0.
- Oaf2r9ci: 0.

# Oaf3 random dataset samplings
- Oaf3r0: 0.
- Oaf3r1: 0.
- Oaf3r2: 0.
- Oaf3r3: 0.
- Oaf3r4: 0.
- Oaf3r5: 0.
- Oaf3r6: 0.
- Oaf3r7: 0.
- Oaf3r8: 0.
- Oaf3r9: 0.
- Oaf3r0ci: 0.
- Oaf3r1ci: 0.
- Oaf3r2ci: 1, CGGACTTCTTTATCTGACCGCCG at 3584.
- Oaf3r3ci: 0.
- Oaf3r4ci: 0.
- Oaf3r5ci: 0.
- Oaf3r6ci: 0.
- Oaf3r7ci: 0.
- Oaf3r8ci: 0.
- Oaf3r9ci: 0.

# Oaf4 element random dataset samplings
- Oaf4r0: 0.
- Oaf4r1: 0.
- Oaf4r2: 0.
- Oaf4r3: 0.
- Oaf4r4: 0.
- Oaf4r5: 0.
- Oaf4r6: 0.
- Oaf4r7: 0.
- Oaf4r8: 0.
- Oaf4r9: 0.
- Oaf4r0ci: 0.
- Oaf4r1ci: 0.
- Oaf4r2ci: 0.
- Oaf4r3ci: 0.
- Oaf4r4ci: 0.
- Oaf4r5ci: 0.
- Oaf4r6ci: 0.
- Oaf4r7ci: 0.
- Oaf4r8ci: 0.
- Oaf4r9ci: 0.

# Oaf random dataset results

## Oafr arbitrary (evens) (4560-2846) UTRs
- Oaf1r0ci: CGGAGAAAGTCTTTATGTCCG at 3378.
- Oaf2r0: CGGCGATGAACTAGGCGCGCCG at 3240.
- Oaf3r2ci: CGGACTTCTTTATCTGACCGCCG at 3584.

## Oafr arbitrary negative direction (evens) (2596-1) distal promoters
- Oaf1r6ci: CGGTAGGGCAGCTTATTCCCG at 1492.

## Oafr alternate negative direction (odds) (2596-1) distal promoters
- Oaf1r5: CGGTGTTAAGCCGGCCCCCCG at 1087.

## Oafr arbitrary positive direction (odds) (4050-1) distal promoters
- Oaf1r5: CGGTGTTAAGCCGGCCCCCCG at 1087.

## Oafr alternate positive direction (evens) (4050-1) distal promoters
- Oaf1r0ci: CGGAGAAAGTCTTTATGTCCG at 3378.
- Oaf1r6ci: CGGTAGGGCAGCTTATTCCCG at 1492.
- Oaf2r0: CGGCGATGAACTAGGCGCGCCG at 3240.
- Oaf3r2ci: CGGACTTCTTTATCTGACCGCCG at 3584.

# Oleate-activated transcription factor analysis and results
The upstream activating sequence (UAS) for the Oaf1p is CGGN3TNAN9-12.
Comparison:
The occurrences of real oleate-activated transcription factors are greater than the randoms. This suggests that the real oafs are likely active or activable.