Branchio-oto-renal syndrome
Synonyms and keywords: Branchiootorenal dysplasia; Melnick-Fraser syndrome; Branchio oto renal syndrome; BOR syndrome Branchio Oto Renal Syndrome; Melnick Fraser Syndrome; Branchio-Otorenal Syndrome; Dysplasia, Branchiootorenal; BOR Syndrome; Branchio-Otorenal Dysplasia; Branchiootorenal Syndrome 2; Branchiootorenal Syndrome 1; Branchio-Oculo-Facial Syndrome; Branchio Oculo Facial Syndrome; Branchial Clefts with Characteristic Facies, Growth Retardation, Imperforate Nasolacrimal Duct, and Premature Aging; Lip Pseudocleft-Hemangiomatous Branchial Cyst Syndrome; Lip Pseudocleft Hemangiomatous Branchial Cyst Syndrome; Hemangiomatous Branchial Clefts-Lip Pseudocleft Syndrome; Hemangiomatous Branchial Clefts Lip Pseudocleft Syndrome; Lee Root Fenske Syndrome; BOF Syndrome; Syndrome, BOF; Branchiooculofacial Syndrome

# Overview
Branchio-oto-renal syndrome (also known as branciootorenal syndrome, BOR syndrome or BOR, Melnick- Fraser Syndrome) is an autosomal dominant genetic disorder involving the kidneys, ears, and neck. 90% of these are due to inheritance and in 10% cases, it is acquired mutation.  It is characterized by the presence of 1) brachial fistulae or cysts;  2) Ear malformations - including outer, middle or inner ear; 3) Renal malformations, which can range from renal hypoplasia to renal agenesis. The most important differential studied is Branchiootic syndrome (BO) which has exactly the same features as BOR syndrome but the affected individuals do not have the kidneys abnormalities like in BOR syndrome. The two condition similarities some times create a hard time for researchers. Sometimes they even consider them together as BOR/BO syndrome.
"Branchio-" means the second branchial arch, s structure that is usually present in the embryo that further gives rise to tissues on the front and the side of the neck. The abnormal development of this branchial arch leads to leads to the formation of neck masses called branchial cleft cysts which is most commonly seen in people with BO/BOR syndrome. Some people might have abnormal appearing pits or holes in the side of the neck called fistulae. They can form a connection with the mouth near the tonsil. Both branchial cleft cyst and fistulae can create problems later in life so they are usually removed during the early stages of childhood. "Oto-" refer to the ear. It has been studied that most patients with BO/BOR syndrome usually have hearing abnormalities. It can be sensorineural, conductive, or mixed. Sensorineural hearing loss is usually seen in the patients with abnormalities in the inner ear: conductive hearing loss is due to the defects of bones in the middle ear; Mixed hearing loss is caused by both inner ear + middle ear abnormalities. Preauricular pits ( tiny holes) and tags (an extra bit of tissue) are the other anomalies associated with the ear anomalies. "Renal" word means kidneys here; The major point to be noted here is that BO syndromes do not have real components. So BOR syndrome causes an alteration in kidney structure and function. The renal abnormalities range from mild to severe and may include one or both the kidneys. The renal abnormalities include the complete absence of kidneys in some cases while in others only mild hypoplasia is present. The most serious condition associated with kidneys is their inability to clear fluids and waste from the body which is usually given a name End-stage renal disease(ESRD).

# History and Epidemology
- Heusinger(1864) first recognized an association between fistulae, preauricular pits, and hearing impairmentdefects.
- Melnick et al. and Fraser et al. in 1975 defined BOR syndrome as a specific entity having an autosomal dominant inheritance pattern with maximum penetrance.
- The incidence rate for BOR syndrome is around 1 in 40,000 people.
- Males and females are equally affected by this disorder.

# Pathophysiology
BOR results from the mutation of the EYA1 gene. 
90% of BOR syndromes result from inheritance and 10% of the cases are thought to be the result of acquired mutations. Branciootorenal syndrome has an Autosomal dominant inheritance pattern with variable expressivity as a result of which the same family members express the different levels of severity of the disease. It also shows a 100% penetrance. The mutations in the genes - SIX1, EYA1, and SIX5 play a major role in the causation of BOR syndrome. Out of these, EYA1 gene mutations play a major role (40%) followed by the SIX1 gene, and SIX5 gene mutation is only found in a small number of people suffering from BOR syndrome.
- EYA1 gene mutations(BOR1, BOS2)
About 40% of people are having EYA1 mutation.
This usually encodes for transcription factors in the metanephric mesenchyme.
- About 40% of people are having EYA1 mutation.
- This usually encodes for transcription factors in the metanephric mesenchyme.
- SIX1 Gene mutation (BOR3, BOS3)
Found in less than 5% of the cases
This gene mainly encodes the transcription factors that control the expression of PAX and GDNF.
The renal malformation is not associated with this mutation
- Found in less than 5% of the cases
- This gene mainly encodes the transcription factors that control the expression of PAX and GDNF.
- The renal malformation is not associated with this mutation
- SIX5 Gene mutation (BOR2)
It is seen in 2-3 percent of cases with BOR syndrome.
Hearing is not impaired with this mutation.
- It is seen in 2-3 percent of cases with BOR syndrome.
- Hearing is not impaired with this mutation.
The proteins produced from these genes play a major role in the development before birth. Interaction of EYA1 protein with SIX5 and SIX1 modulates the genes involved in embryonic development. These interactions also play a major role in the development of the ear, kidneys, and second branchial arch. The latter organs are mainly involved in the Branciootorenal syndrome.

# Differentiating Branchio-oto-renal syndrome from other Diseases
The symptoms of the following disorders can be overlapping with symptoms of Branchio-renal syndrome. comparison is important to make the relevant differential diagnosis:
- The oculo-auriculo-vertebral spectrum
Characterized by physical features involving Jaw, mouth, ears, eyes, and bones of the spinal column
One side of the body is more affected as compared to the other side of the body
- Characterized by physical features involving Jaw, mouth, ears, eyes, and bones of the spinal column
- One side of the body is more affected as compared to the other side of the body
- Branchio-oculofacial syndrome
Rare autosomal dominant disorder
Most commonly - growth delay, abnormal sinuses, unusual facial appearance, and/or premature aging
less commonly - graying of hair, high arched palate, abnormal teeth, and cyst under the skin of the scalp can be found
- Rare autosomal dominant disorder
- Most commonly - growth delay, abnormal sinuses, unusual facial appearance, and/or premature aging
- less commonly - graying of hair, high arched palate, abnormal teeth, and cyst under the skin of the scalp can be found
- Towns Brocks syndrome
Rare genetic disorder
Deafness or hearing loss
Associated ear, hand, and foot anomalies
No anal opening
- Rare genetic disorder
- Deafness or hearing loss
- Associated ear, hand, and foot anomalies
- No anal opening
- Treacher Collins syndrome
Characterized by abnormalities in the facial area and head due to the maldevelopment of the skull
- Characterized by abnormalities in the facial area and head due to the maldevelopment of the skull

# Diagnosis

## Gene Studies
There are 3 main gene mutations studied so far that results in the causation of BOR syndrome.
The most common gene mutations are:
- EYA1( 40% of the patients), along with other 2 gene mutations those seen less commonly are
- SIX1 ( 4% of the patients)
- SIX5 ( 5% of the patients)

## History and Symptoms
The most common presenting symptoms in patients with BOR syndrome is:
Otologic manifestations
- With more than 90% of patients have at least one of the following
- Deafness- (0% of the people have hearing loss.
It can be sensorineural, conductive, or mixed ranging from mild severity to marked hearing loss
Approximately 50% of the people present with mixed hearing loss
30% with conductive hearing loss
20% with sensorineural hearing loss
- It can be sensorineural, conductive, or mixed ranging from mild severity to marked hearing loss
- Approximately 50% of the people present with mixed hearing loss
- 30% with conductive hearing loss
- 20% with sensorineural hearing loss
- Preauricular tags
- Preauricular pits
- Branchio-oto-renal Syndrome- Facial abnormalities and Renal biopsy slides associated with focal glomerulosclerosis.,    ear malformations: ossicular hypoplasia or displacement
- Inner ear anomalies: dysplasia in semicircular canals, cochlear hypoplasia, enlargement of aqueducts.
- External auditory canal stenosis or malformation
- Lop-ear deformity
Branchial Arch menifestations
- Branchial cleft cyst, fistulae, sinus tract.
Renal malformations
- Renal Hypoplasia or agenesis in some cases
- ureteropelvic junction obstruction
- Vesicoureteral reflux
Miscellaneous Findings
- Lacrimal duct aplasia/Hypoplasia
- Facial nerve palsy
- Retrognathia
- MVP
- Cleft lip/palate

## Diagnotic criteria based on history and physical exam
- Positive family history of branchial, oto, renal abnormalities is strongly suggestive of BOR syndrome.
- If no evidence of family history then clinical criteria should be used to make the diagnosis, Either:
3 Major
2 Major plus 2 Minor criteria
- 3 Major
- 2 Major plus 2 Minor criteria

# Management and Treatment
Management
- Most Important component in managing a patient with Branchio-oto-renal syndrome is the evaluation of involved organs carefully. The following table shows the organs needed to be evaluated and what a medical practitioner needs to focus on while managing the patient of BOR syndrome
Treatment
- Treatment for Otologic Anomalies
In the case of hearing impairment get the patient evaluated for the type of hearing loss and give them the hearing aid or cochlear implant
If the defect is mainly in the external ear canal with the middle ear intact then advise canaloplasty.
Cosmetic procedures can be done if the patient desires the one. These are usually reserved for pinna deformities.
Semiannual examination is advised to keep an eye on hearing impairment or its progression.
- In the case of hearing impairment get the patient evaluated for the type of hearing loss and give them the hearing aid or cochlear implant
- If the defect is mainly in the external ear canal with the middle ear intact then advise canaloplasty.
- Cosmetic procedures can be done if the patient desires the one. These are usually reserved for pinna deformities.
- Semiannual examination is advised to keep an eye on hearing impairment or its progression.
- Treatment for Renal Anomalies
Treatment usually depends upon the severity of renal complications.
Medical and surgical both types of options are available.
Temporary Dialysis or Kidney transplantation is the option available in the case of End-Stage Renal disease.
Semiannual examination of kidneys is advised to prevent the progression of kidney diseases.
- Treatment usually depends upon the severity of renal complications.
- Medical and surgical both types of options are available.
- Temporary Dialysis or Kidney transplantation is the option available in the case of End-Stage Renal disease.
- Semiannual examination of kidneys is advised to prevent the progression of kidney diseases.
- Treatment of Branchial Anomalies
Cyst gets easily infected so antibiotics can be used in the initial management.
Usually the Branchial anomalies requires the invasive treatment approach
If there is the presence of cyst/fistula or sinus tract then those should be excised
Usually complete dissection of the tract and tonsillectomy is also done along with.
- Cyst gets easily infected so antibiotics can be used in the initial management.
- Usually the Branchial anomalies requires the invasive treatment approach
- If there is the presence of cyst/fistula or sinus tract then those should be excised
Usually complete dissection of the tract and tonsillectomy is also done along with.
- Usually complete dissection of the tract and tonsillectomy is also done along with.