Ndt80p gene transcriptions
"The Saccharomyces cerevisiae  Ndt80 protein is the founding member of a class of p53-like transcription factors that is known as the NDT80/PhoG-like DNA-binding family."
Ndt80  is a meiosis-specific transcription factor required for successful completion of meiosis and spore formation. The DNA-binding domain of Ndt80 has been isolated, and the structure reveals that this protein is a member of the Ig-fold family of transcription factors. Ndt80 also competes with the repressor SUM1 for binding to promoters containing MSEs.
Direct "binding of Ndt80 to the  MSE is necessary for activating transcription of the middle sporulation genes."
"These genomic sequences were analysed for the presence of  middle sporulation elements (MSE) motif (5'-ACACAAA-3') using the NCBI BLAST tool."

# Human genes

# Interactions

# Consensus sequences
The upstream activating sequence (UAS) for the Ndt80p is 5'-DNCRCAAAW-3'.

# Ndt80 samplings
Copying DNCRCAAAW, (A/G/T)(A/C/G/T)C(A/G)CAAA(A/T), or TCCGCA in "F" yields none between ZSCAN22 and A1BG and none between ZNF497 and A1BG as can be found by the computer programs.
For the Basic programs testing consensus sequence (A/G/T)(A/C/G/T)C(A/G)CAAA(A/T) (starting with SuccessablesNDT.bas) written to compare nucleotide sequences with the sequences on either the template strand (-), or coding strand (+), of the DNA, in the negative direction (-), or the positive direction (+), the programs are, are looking for, and found:
- negative strand, negative direction, looking for (A/G/T)NC(A/G)CAAA(A/T), 0.
- positive strand, negative direction, looking for (A/G/T)NC(A/G)CAAA(A/T), 1, ACCACAAAA at 3767.
- positive strand, positive direction, looking for (A/G/T)NC(A/G)CAAA(A/T), 0.
- negative strand, positive direction, looking for (A/G/T)NC(A/G)CAAA(A/T), 0.
- complement, negative strand, negative direction, looking for (A/C/T)NG(C/T)GTTT(A/T), 1, TGGTGTTTT at 3767.
- complement, positive strand, negative direction, looking for (A/C/T)NG(C/T)GTTT(A/T), 0.
- complement, positive strand, positive direction, looking for (A/C/T)NG(C/T)GTTT(A/T), 0.
- complement, negative strand, positive direction, looking for (A/C/T)NG(C/T)GTTT(A/T), 0.
- inverse complement, negative strand, negative direction, looking for (A/T)TTTG(C/T)GN(A/C/T), 1, TTTTGTGTT at 3514.
- inverse complement, positive strand, negative direction, looking for (A/T)TTTG(C/T)GN(A/C/T), 0.
- inverse complement, positive strand, positive direction, looking for (A/T)TTTG(C/T)GN(A/C/T), 0.
- inverse complement, negative strand, positive direction, looking for (A/T)TTTG(C/T)GN(A/C/T), 0.
- inverse negative strand, negative direction, looking for (A/T)AAAC(A/G)CN(A/G/T), 0.
- inverse positive strand, negative direction, looking for (A/T)AAAC(A/G)CN(A/G/T), 1, AAAACACAA at 3514.
- inverse positive strand, positive direction, looking for (A/T)AAAC(A/G)CN(A/G/T), 0.
- inverse negative strand, positive direction, looking for (A/T)AAAC(A/G)CN(A/G/T), 0.

## NDT (4560-2846) UTRs
- Negative strand, negative direction: TTTTGTGTT at 3514.
- Positive strand, negative direction: ACCACAAAA at 3767.

# NDT random dataset samplings
- NDTr0: 2, ACCGCAAAT at 2807, TGCACAAAT at 1788.
- NDTr1: 3, TACGCAAAA at 4408, ATCACAAAA at 3175, ATCGCAAAA at 1775.
- NDTr2: 1, AGCACAAAA at 4322.
- NDTr3: 0.
- NDTr4: 1, GACACAAAA at 1971.
- NDTr5: 1, AGCGCAAAA at 752.
- NDTr6: 3, ACCACAAAT at 3077, GGCACAAAA at 970, TGCGCAAAT at 362.
- NDTr7: 2, TTCGCAAAT at 2393, GCCGCAAAT at 660.
- NDTr8: 2, GCCACAAAT at 3714, ACCGCAAAA at 2111.
- NDTr9: 1, GGCACAAAT at 4053.
- NDTr0ci: 0.
- NDTr1ci: 1, TTTTGTGGT at 284.
- NDTr2ci: 2, TTTTGTGGA at 4489, TTTTGCGGT at 39.
- NDTr3ci: 1, ATTTGCGCT at 3974.
- NDTr4ci: 1, TTTTGCGCT at 1428.
- NDTr5ci: 3, ATTTGTGGC at 3882, TTTTGTGTT at 324, TTTTGCGGT at 278.
- NDTr6ci: 1, TTTTGTGCA at 2655.
- NDTr7ci: 1, TTTTGTGGT at 495.
- NDTr8ci: 1, ATTTGCGGT at 2530.
- NDTr9ci: 1, TTTTGTGGT at 472.

## NDTr arbitrary (evens) (4560-2846) UTRs
- NDTr2: AGCACAAAA at 4322.
- NDTr6: ACCACAAAT at 3077.
- NDTr8: GCCACAAAT at 3714.
- NDTr2ci: TTTTGTGGA at 4489.

## NDTr alternate (odds) (4560-2846) UTRs
- NDTr1: TACGCAAAA at 4408, ATCACAAAA at 3175.
- NDTr9: GGCACAAAT at 4053.
- NDTr3ci: ATTTGCGCT at 3974.
- NDTr5ci: ATTTGTGGC at 3882.

## NDTr arbitrary positive direction (odds) (4445-4265) core promoters
- NDTr1: TACGCAAAA at 4408.

## NDTr alternate positive direction (evens) (4445-4265) core promoters
- NDTr2: AGCACAAAA at 4322.

## NDTr arbitrary negative direction (evens) (2811-2596) proximal promoters
- NDTr0: ACCGCAAAT at 2807.
- NDTr6ci: TTTTGTGCA at 2655.

## NDTr arbitrary positive direction (odds) (4265-4050) proximal promoters
- NDTr9: GGCACAAAT at 4053.

## NDTr arbitrary negative direction (evens) (2596-1) distal promoters
- NDTr0: TGCACAAAT at 1788.
- NDTr6: GGCACAAAA at 970, TGCGCAAAT at 362.
- NDTr8: ACCGCAAAA at 2111.
- NDTr2ci: TTTTGCGGT at 39.
- NDTr4ci: TTTTGCGCT at 1428.
- NDTr8ci: ATTTGCGGT at 2530.

## NDTr alternate negative direction (odds) (2596-1) distal promoters
- NDTr1: ATCGCAAAA at 1775.
- NDTr5: AGCGCAAAA at 752.
- NDTr7: TTCGCAAAT at 2393, GCCGCAAAT at 660.
- NDTr7ci: TTTTGTGGT at 495.
- NDTr9ci: TTTTGTGGT at 472.

## NDTr arbitrary positive direction (odds) (4050-1) distal promoters
- NDTr1: ATCACAAAA at 3175, ATCGCAAAA at 1775.
- NDTr5: AGCGCAAAA at 752.
- NDTr7: TTCGCAAAT at 2393, GCCGCAAAT at 660.
- NDTr3ci: ATTTGCGCT at 3974.
- NDTr7ci: TTTTGTGGT at 495.
- NDTr9ci: TTTTGTGGT at 472.

## NDTr alternate positive direction (evens) (4050-1) distal promoters
- NDTr0: ACCGCAAAT at 2807, TGCACAAAT at 1788.
- NDTr6: ACCACAAAT at 3077, GGCACAAAA at 970, TGCGCAAAT at 362.
- NDTr8: GCCACAAAT at 3714, ACCGCAAAA at 2111.
- NDTr2ci: TTTTGCGGT at 39.
- NDTr4ci: TTTTGCGCT at 1428.
- NDTr6ci: TTTTGTGCA at 2655.
- NDTr8ci: ATTTGCGGT at 2530.

# NDT analysis and results
The upstream activating sequence (UAS) for the Ndt80p is DNCRCAAAW.
Comparison:
The occurrences of real NDTs are greater than the randoms. This suggests that the real NDTs are likely active or activable.