OxRML/AgentSLR huggingface dataset:
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Unspecified
Outbreak: West Africa 2013-2016
Parameter: Human delay - Symptom Onset/Fever to Death
Value: 4 Days
Value type: Median
Range: 1 - 7
Delay type: Symptom onset to death
Other delay: Symptom Onset/Fever to Death (Symptom Onset/Fever to Death)
Population group: Persons under investigation (Community based)
Population sex: Both
Population age range: 3 - 55
Sample size: 14
Country: Sierra Leone
Location: Western Area Urban, Western Area Rural, Port Loko, Bombali, Tonkolili, Moyamba
Study period: 13 Jan 2015 - 5 Apr 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Unspecified
Outbreak: West Africa 2013-2016
Parameter: Human delay - Exposure/Infection to Symptom Onset/Fever
Value: 8 Days
Value type: Median
Range: 4 - 18
Delay type: Incubation period
Other delay: Exposure/Infection to Symptom Onset/Fever (Exposure/Infection to Symptom Onset/Fever)
Population group: Persons under investigation (Community based)
Population sex: Both
Population age range: 3 - 55
Sample size: 14
Country: Sierra Leone
Location: Western Area Urban, Western Area Rural, Port Loko, Bombali, Tonkolili, Moyamba
Study period: 13 Jan 2015 - 5 Apr 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Unspecified
Outbreak: West Africa 2013-2016
Parameter: Reproduction number (Basic R0)
Value: 4.16 No units
Value type: Unspecified
Estimation method: Compartmental model
Timing of estimate: Unspecified
Population group: Unspecified (Unspecified)
Population sex: Unspecified
Country: Guinea
Study period: 22 Mar 2014 - 25 Jan 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Unspecified
Outbreak: West Africa 2013-2016
Parameter: Human delay - latent period  (inverse parameter)
Value: 0.06 Days
Value type: Unspecified
Timing of estimate: Unspecified
Delay type: Latent period
Population group: Unspecified (Unspecified)
Population sex: Unspecified
Country: Guinea
Study period: 22 Mar 2014 - 25 Jan 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Unspecified
Outbreak: West Africa 2013-2016
Parameter: Severity - case fatality rate (CFR)
Value: 66.47 Percentage (%)
Value type: Unspecified
CFR/IFR method: Unspecified
Timing of estimate: Unspecified
Population group: Unspecified (Unspecified)
Population sex: Unspecified
Country: Guinea
Study period: 22 Mar 2014 - 25 Jan 2015
Pathogen: Ebola virus
Ebola species: Bundibugyo, Sudan, Taï Forest & Zaire
Ebola variant: Bundibugyo virus (BDBV);Sudan virus (SUDV);Taï Forest virus (TAFV);Zaire Ebola virus (EBOV)
Outbreak: Multiple outbreaks
Parameter: Mutations - evolutionary rate
Value: 10.93 Substitutions/site/year
Value type: Unspecified
Range: 7.66 - 13.94
Uncertainty: 0.52 - 24.61 (HPDI 95%)
Combined uncertainty: 0.52 - 24.61 (HPDI 95%)
Genome site: Glycoprotein
Country: Multi-country: Africa, Asia, Europe, USA (n = 9)
Location: DRC, Gabon, Italy, Ivory Coast, Philippines, Republic of the Congo, Sudan, Uganda, United States
Study period: 1976 - 2008
Pathogen: Ebola virus
Ebola species: Bundibugyo, Sudan, Taï Forest & Zaire
Ebola variant: Bundibugyo virus (BDBV);Sudan virus (SUDV);Taï Forest virus (TAFV);Zaire Ebola virus (EBOV)
Outbreak: Multiple outbreaks
Parameter: Mutations - evolutionary rate
Value: 23.14 Substitutions/site/year
Value type: Unspecified
Uncertainty: 16.49 - 31.66 (HPDI 95%)
Combined uncertainty: 16.49 - 31.66 (HPDI 95%)
Genome site: Polymerase (L)
Country: Multi-country: Africa, Asia, Europe, USA (n = 9)
Location: DRC, Gabon, Italy, Ivory Coast, Philippines, Republic of the Congo, Sudan, Uganda, United States
Study period: 1976 - 2008
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Risk factors
Timing of estimate: Unspecified
Risk factor: Age
Risk factor outcome: Death
Risk factor significant: Significant
Risk factor adjusted: Adjusted
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 465
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Risk factors
Timing of estimate: Unspecified
Risk factor: Age;Other;Sex
Risk factor outcome: Death
Risk factor significant: Not significant
Risk factor adjusted: Adjusted
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 465
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Risk factors
Timing of estimate: Unspecified
Risk factor: Close contact;Funeral;Other
Risk factor outcome: Infection
Risk factor significant: Significant
Risk factor adjusted: Unspecified
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 470
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Risk factors
Timing of estimate: Unspecified
Risk factor: Occupation;Other
Risk factor outcome: Infection
Risk factor occupation: Healthcare
Risk factor significant: Not significant
Risk factor adjusted: Unspecified
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 470
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Human delay - Admission to Care/Hospitalisation to Recovery/non-Infectiousness
Value: 14.7 Days
Value type: Mean
Range: 13.4 - 23
Timing of estimate: Unspecified
Disaggregated by: Age, Region, Sex
Delay type: Admission to care to recovery/non-infectiousness
Other delay: Admission to Care/Hospitalisation to Recovery/non-Infectiousness (Admission to Care/Hospitalisation to Recovery/non-Infectiousness)
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 465
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Human delay - Admission to Care/Hospitalisation to Death
Value: 5.6 Days
Value type: Mean
Range: 4.7 - 6.6
Timing of estimate: Unspecified
Disaggregated by: Age, Region, Sex
Delay type: Admission to care to death
Other delay: Admission to Care/Hospitalisation to Death (Admission to Care/Hospitalisation to Death)
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 465
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: West Africa 2013-2016
Parameter: Severity - case fatality rate (CFR)
Value: 57.6 Percentage (%)
Value type: Unspecified
Range: 38 - 92.9
CFR/IFR numerator: 268
CFR/IFR denominator: 465
CFR/IFR method: Adjusted
Timing of estimate: Unspecified
Disaggregated by: Age, Region, Sex
Population group: Persons under investigation (Hospital based)
Population sex: Both
Sample size: 465
Country: Liberia, Sierra Leone
Location: Bong Margibi Lunsar Makeni Kambia
Study period: 15 Sep 2014 - 15 Sep 2015
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Bundibugyo virus (BDBV) ;Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Risk factors
Timing of estimate: Post outbreak
Risk factor: Age;Hospitalisation;Other
Risk factor outcome: Death
Risk factor significant: Significant
Risk factor adjusted: Unspecified
Population group: Unspecified (Unspecified)
Population sex: Both
Country: DRC
Location: Boende Isiro Kikwit
Study period: Jan 1995 - Nov 2012
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Bundibugyo virus (BDBV) ;Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Risk factors
Timing of estimate: Post outbreak
Risk factor: Age;Other
Risk factor outcome: Death
Risk factor significant: Not significant
Risk factor adjusted: Unspecified
Population group: Unspecified (Unspecified)
Population sex: Both
Country: DRC
Location: Boende Isiro Kikwit
Study period: Jan 1995 - Nov 2012
Pathogen: Ebola virus
Ebola species: Unspecified
Ebola variant: Bundibugyo virus (BDBV) ;Zaire Ebola virus (EBOV)
Outbreak: Multiple outbreaks
Parameter: Risk factors
Timing of estimate: Post outbreak
Risk factor: Other
Risk factor outcome: Death
Risk factor significant: Not significant
Risk factor adjusted: Unspecified
Population group: Unspecified (Unspecified)
Population sex: Both
Country: DRC
Location: Yambuku Kikwit Mweka Isiro Boende
Study period: Aug 1976 - Nov 2012
Pathogen: Ebola virus
Ebola species: Unspecified
Ebola variant: Bundibugyo virus (BDBV) ;Zaire Ebola virus (EBOV)
Outbreak: Multiple outbreaks
Parameter: Risk factors
Timing of estimate: Post outbreak
Risk factor: Age;Other
Risk factor outcome: Death
Risk factor significant: Significant
Risk factor adjusted: Unspecified
Population group: Unspecified (Unspecified)
Population sex: Both
Country: DRC
Location: Yambuku Kikwit Mweka Isiro Boende
Study period: Aug 1976 - Nov 2012
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1976
Parameter: Severity - case fatality rate (CFR)
Value: 96 Percentage (%)
Value type: Mean
Uncertainty: 92.6 - 97.9 (95% CI)
Combined uncertainty: 92.6 - 97.9 (95% CI)
CFR/IFR numerator: 252
CFR/IFR denominator: 262
CFR/IFR method: Adjusted
Timing of estimate: Post outbreak
Disaggregated by: Age, Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 262
Country: DRC
Location: Yambuku
Study period: Aug 1976 - Oct 1976
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1976
Parameter: Reproduction number (Effective, Re)
Estimation method: Branching process
Timing of estimate: Post outbreak
Disaggregated by: Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 262
Country: DRC
Location: Yambuku
Study period: Aug 1976 - Oct 1976
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Severity - case fatality rate (CFR)
Value: 78 Percentage (%)
Value type: Mean
Uncertainty: 73 - 83 (95% CI)
Combined uncertainty: 73 - 83 (95% CI)
CFR/IFR numerator: 248
CFR/IFR denominator: 317
CFR/IFR method: Adjusted
Timing of estimate: Post outbreak
Disaggregated by: Age, Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Reproduction number (Effective, Re)
Estimation method: Branching process
Timing of estimate: Post outbreak
Disaggregated by: Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Human delay - Symptom Onset/Fever to Reporting
Value: 12.9 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 12.91 (Mean)
Distribution parameter 2: 7.72 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to reporting
Other delay: Symptom Onset/Fever to Reporting (Symptom Onset/Fever to Reporting)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Human delay - Symptom Onset/Fever to Admission to Care/Hospitalisation
Value: 5.02 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 5.02 (Mean)
Distribution parameter 2: 3.91 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to admission to care
Other delay: Symptom Onset/Fever to Admission to Care/Hospitalisation (Symptom Onset/Fever to Admission to Care/Hospitalisation)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Human delay - Symptom Onset/Fever to Death
Value: 9.47 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 9.47 (Mean)
Distribution parameter 2: 4.44 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to death
Other delay: Symptom Onset/Fever to Death (Symptom Onset/Fever to Death)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Human delay - time in care (length of stay)
Value: 5.72 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 5.72 (Mean)
Distribution parameter 2: 5.67 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Admission to care to death/discharge
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 1995
Parameter: Human delay - Admission to Care/Hospitalisation to Death
Value: 4.5 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 4.5 (Mean)
Distribution parameter 2: 3.69 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Admission to care to death
Other delay: Admission to Care/Hospitalisation to Death (Admission to Care/Hospitalisation to Death)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 317
Country: DRC
Location: Kikwit
Study period: Jan 1995 - Jun 1995
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2007
Parameter: Severity - case fatality rate (CFR)
Value: 74 Percentage (%)
Value type: Mean
Uncertainty: 68 - 79 (95% CI)
Combined uncertainty: 68 - 79 (95% CI)
CFR/IFR numerator: 187
CFR/IFR method: Adjusted
Timing of estimate: Post outbreak
Disaggregated by: Age, Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 264
Country: DRC
Location: Mweka
Study period: Apr 2007 - Oct 2007
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2007
Parameter: Reproduction number (Effective, Re)
Estimation method: Branching process
Timing of estimate: Post outbreak
Disaggregated by: Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 264
Country: DRC
Location: Mweka
Study period: Apr 2007 - Oct 2007
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2007
Parameter: Human delay - Symptom Onset/Fever to Reporting
Value: 0 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 0 (Mean)
Distribution parameter 2: 0 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to reporting
Other delay: Symptom Onset/Fever to Reporting (Symptom Onset/Fever to Reporting)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 264
Country: DRC
Location: Mweka
Study period: Apr 2007 - Oct 2007
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Severity - case fatality rate (CFR)
Value: 44 Percentage (%)
Value type: Mean
Uncertainty: 26 - 62 (95% CI)
Combined uncertainty: 26 - 62 (95% CI)
CFR/IFR numerator: 14
CFR/IFR denominator: 32
CFR/IFR method: Adjusted
Timing of estimate: Post outbreak
Disaggregated by: Age, Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Reproduction number (Effective, Re)
Estimation method: Branching process
Timing of estimate: Post outbreak
Disaggregated by: Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Human delay - Symptom Onset/Fever to Reporting
Value: 10.04 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 10.04 (Mean)
Distribution parameter 2: 8.47 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to reporting
Other delay: Symptom Onset/Fever to Reporting (Symptom Onset/Fever to Reporting)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Human delay - Symptom Onset/Fever to Admission to Care/Hospitalisation
Value: 0 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 0 (Mean)
Distribution parameter 2: 0 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to admission to care
Other delay: Symptom Onset/Fever to Admission to Care/Hospitalisation (Symptom Onset/Fever to Admission to Care/Hospitalisation)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Human delay - Symptom Onset/Fever to Death
Value: 7.62 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 7.62 (Mean)
Distribution parameter 2: 4.44 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to death
Other delay: Symptom Onset/Fever to Death (Symptom Onset/Fever to Death)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Human delay - time in care (length of stay)
Value: 1.5 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 1.5 (Mean)
Distribution parameter 2: 2.12 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Admission to care to death/discharge
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2008-2009
Parameter: Human delay - Admission to Care/Hospitalisation to Death
Value: 11 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 11 (Mean)
Distribution parameter 2: 9.85 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Admission to care to death
Other delay: Admission to Care/Hospitalisation to Death (Admission to Care/Hospitalisation to Death)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 32
Country: DRC
Location: Mweka
Study period: Nov 2008 - Jan 2009
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Severity - case fatality rate (CFR)
Value: 54 Percentage (%)
Value type: Mean
Uncertainty: 39 - 68 (95% CI)
Combined uncertainty: 39 - 68 (95% CI)
CFR/IFR numerator: 28
CFR/IFR denominator: 52
CFR/IFR method: Adjusted
Timing of estimate: Post outbreak
Disaggregated by: Age, Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Reproduction number (Effective, Re)
Estimation method: Branching process
Timing of estimate: Post outbreak
Disaggregated by: Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Human delay - Symptom Onset/Fever to Reporting
Value: 8.83 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 8.83 (Mean)
Distribution parameter 2: 8.29 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to reporting
Other delay: Symptom Onset/Fever to Reporting (Symptom Onset/Fever to Reporting)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Human delay - Symptom Onset/Fever to Admission to Care/Hospitalisation
Value: 4 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 4 (Mean)
Distribution parameter 2: 3.27 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to admission to care
Other delay: Symptom Onset/Fever to Admission to Care/Hospitalisation (Symptom Onset/Fever to Admission to Care/Hospitalisation)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Human delay - Symptom Onset/Fever to Death
Value: 11.37 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 11.37 (Mean)
Distribution parameter 2: 5.41 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Symptom onset to death
Other delay: Symptom Onset/Fever to Death (Symptom Onset/Fever to Death)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Human delay - time in care (length of stay)
Value: 8 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 8 (Mean)
Distribution parameter 2: 6.56 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Admission to care to death/discharge
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Bundibugyo
Ebola variant: Bundibugyo virus (BDBV)
Outbreak: DRC, 2012
Parameter: Human delay - Admission to Care/Hospitalisation to Death
Value: 7.59 Days
Value type: Mean
Distribution: Gamma
Distribution parameter 1: 7.59 (Mean)
Distribution parameter 2: 5.52 (Mean sd)
Timing of estimate: Post outbreak
Delay type: Admission to care to death
Other delay: Admission to Care/Hospitalisation to Death (Admission to Care/Hospitalisation to Death)
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 52
Country: DRC
Location: Isiro
Study period: Jun 2012 - Nov 2012
Pathogen: Ebola virus
Ebola species: Zaire
Ebola variant: Zaire Ebola virus (EBOV)
Outbreak: DRC, 2012
Parameter: Severity - case fatality rate (CFR)
Value: 74 Percentage (%)
Value type: Mean
Uncertainty: 62 - 84 (95% CI)
Combined uncertainty: 62 - 84 (95% CI)
CFR/IFR numerator: 49
CFR/IFR denominator: 66
CFR/IFR method: Adjusted
Timing of estimate: Post outbreak
Disaggregated by: Age, Time
Population group: Unspecified (Unspecified)
Population sex: Both
Sample size: 68
Country: DRC
Location: Boende
Study period: Aug 2012 - Oct 2012