OpenRaiser/Intern-Atlas huggingface dataset:
Atomizer: An LLM-based Collaborative Multi-Agent Framework for Intent-Driven Commit Untangling
Venue: arXiv cs.SE 2026
Year: 2026

Composite commits, which entangle multiple unrelated concerns, are prevalent in software development and significantly hinder program comprehension and maintenance. Existing automated untangling methods, particularly state-of-the-art graph clustering-based approaches, are fundamentally limited by two issues. (1) They over-rely on structural information, failing to grasp the crucial semantic intent behind changes, and (2) they operate as ``single-pass'' algorithms, lacking a mechanism for the critical reflection and refinement inherent in human review processes. To overcome these challenges, we introduce Atomizer, a novel collaborative multi-agent framework for composite commit untangling. To address the semantic deficit, Atomizer employs an Intent-Oriented Chain-of-Thought (IO-CoT) strategy, which prompts large language models (LLMs) to infer the intent of each code change according to both the structure and the semantic information of code. To overcome the limitations of ``single-pass'' grouping, we employ two agents to establish a grouper-reviewer collaborative refinement loop, which mirrors human review practices by iteratively refining groupings until all changes in a cluster share the same underlying semantic intent. Extensive experiments on two benchmark C# and Java datasets demonstrate that Atomizer significantly outperforms several representative baselines. On average, it surpasses the state-of-the-art graph-based methods by over 6.0% on the C# dataset and 5.5% on the Java dataset. This superiority is particularly pronounced on complex commits, where Atomizer's performance advantage widens to over 16%.
Benchmarking the Computational and Representational Efficiency of State Space Models against Transformers on Long-Context Dyadic Sessions
Venue: arXiv cs.LG 2026
Year: 2026

State Space Models (SSMs) have emerged as a promising alternative to Transformers for long-context sequence modeling, offering linear $O(N)$ computational complexity compared to the Transformer's quadratic $O(N^2)$ scaling. This paper presents a comprehensive benchmarking study comparing the Mamba SSM against the LLaMA Transformer on long-context sequences, using dyadic therapy sessions as a representative test case. We evaluate both architectures across two dimensions: (1) computational efficiency, where we measure memory usage and inference speed from 512 to 8,192 tokens, and (2) representational efficiency, where we analyze hidden state dynamics and attention patterns. Our findings provide actionable insights for practitioners working with long-context applications, establishing precise conditions under which SSMs offer advantages over Transformers.
MCP-SandboxScan: WASM-based Secure Execution and Runtime Analysis for MCP Tools
Venue: arXiv cs.CR 2026
Year: 2026

Tool-augmented LLM agents raise new security risks: tool executions can introduce runtime-only behaviors, including prompt injection and unintended exposure of external inputs (e.g., environment secrets or local files). While existing scanners often focus on static artifacts, analyzing runtime behavior is challenging because directly executing untrusted tools can itself be dangerous. We present MCP-SandboxScan, a lightweight framework motivated by the Model Context Protocol (MCP) that safely executes untrusted tools inside a WebAssembly/WASI sandbox and produces auditable reports of external-to-sink exposures. Our prototype (i) extracts LLM-relevant sinks from runtime outputs (prompt/messages and structured tool-return fields), (ii) instantiates external-input candidates from environment values, mounted file contents, and output-surfaced HTTP fetch intents, and (iii) links sources to sinks via snippet-based substring matching. Case studies on three representative tools show that MCP-SandboxScan can surface provenance evidence when external inputs appear in prompt/messages or tool-return payloads, and can expose filesystem capability violations as runtime evidence. We further compare against a lightweight static string-signature baseline and use a micro-benchmark to characterize false negatives under transformations and false positives from short-token collisions.
Diffusion Timbre Transfer Via Mutual Information Guided Inpainting
Venue: arXiv cs.SD 2026
Year: 2026

We study timbre transfer as an inference-time editing problem for music audio. Starting from a strong pre-trained latent diffusion model, we introduce a lightweight procedure that requires no additional training: (i) a dimension-wise noise injection that targets latent channels most informative of instrument identity, and (ii) an early-step clamping mechanism that re-imposes the input's melodic and rhythmic structure during reverse diffusion. The method operates directly on audio latents and is compatible with text/audio conditioning (e.g., CLAP). We discuss design choices,analyze trade-offs between timbral change and structural preservation, and show that simple inference-time controls can meaningfully steer pre-trained models for style-transfer use cases.
Aggressive Compression Enables LLM Weight Theft
Venue: arXiv cs.CR 2026
Year: 2026

As frontier AIs become more powerful and costly to develop, adversaries have increasing incentives to steal model weights by mounting exfiltration attacks. In this work, we consider exfiltration attacks where an adversary attempts to sneak model weights out of a datacenter over a network. While exfiltration attacks are multi-step cyber attacks, we demonstrate that a single factor, the compressibility of model weights, significantly heightens exfiltration risk for large language models (LLMs). We tailor compression specifically for exfiltration by relaxing decompression constraints and demonstrate that attackers could achieve 16x to 100x compression with minimal trade-offs, reducing the time it would take for an attacker to illicitly transmit model weights from the defender's server from months to days. Finally, we study defenses designed to reduce exfiltration risk in three distinct ways: making models harder to compress, making them harder to 'find,' and tracking provenance for post-attack analysis using forensic watermarks. While all defenses are promising, the forensic watermark defense is both effective and cheap, and therefore is a particularly attractive lever for mitigating weight-exfiltration risk.
T3C: Test-Time Tensor Compression with Consistency Guarantees
Venue: arXiv cs.CL 2026
Year: 2026

We present T3C, a train-once, test-time budget-conditioned compression framework that exposes rank and precision as a controllable deployment knob. T3C combines elastic tensor factorization (maintained up to a maximal rank) with rank-tied mixed-precision quantization and a lightweight controller that maps a latency/energy/size budget token to per-layer rank/bit assignments; the policy snaps to hardware-aligned profiles and is monotone in the budget. A fast, layerwise consistency certificate, computed from spectral proxies and activation statistics, upper-bounds logit drift and regularizes training, yielding a practical reliability signal with negligible overhead. On ImageNet-1k, T3C shifts the vision Pareto frontier: for ResNet-50 at matched accuracy (\leq 0.5% drop), p50 latency is 1.18ms with a 38MB model, outperforming PTQ-8b (1.44ms, 88MB); for ViT-B/16, T3C reaches 2.30ms p50 with 59MB, improving over strong PTQ/QAT baselines. A single T3C checkpoint therefore provides predictable, certificate-backed accuracy-latency-size trade-offs on demand across devices.
Accelerating Monte-Carlo Tree Search with Optimized Posterior Policies
Venue: arXiv cs.AI 2026
Year: 2026

We introduce a recursive AlphaZero-style Monte--Carlo tree search algorithm, "RMCTS". The advantage of RMCTS over AlphaZero's MCTS-UCB is speed. In RMCTS, the search tree is explored in a breadth-first manner, so that network inferences naturally occur in large batches. This significantly reduces the GPU latency cost. We find that RMCTS is often more than 40 times faster than MCTS-UCB when searching a single root state, and about 3 times faster when searching a large batch of root states. The recursion in RMCTS is based on computing optimized posterior policies at each game state in the search tree, starting from the leaves and working back up to the root. Here we use the posterior policy explored in "Monte--Carlo tree search as regularized policy optimization" (Grill, et al.) Their posterior policy is the unique policy which maximizes the expected reward given estimated action rewards minus a penalty for diverging from the prior policy. The tree explored by RMCTS is not defined in an adaptive manner, as it is in MCTS-UCB. Instead, the RMCTS tree is defined by following prior network policies at each node. This is a disadvantage, but the speedup advantage is more significant, and in practice we find that RMCTS-trained networks match the quality of MCTS-UCB-trained networks in roughly one-third of the training time. We include timing and quality comparisons of RMCTS vs. MCTS-UCB for three games: Connect-4, Dots-and-Boxes, and Othello.
Spectral-Window Hybrid (SWH)
Venue: arXiv cs.LG 2026
Year: 2026

Scaling sequence modeling to extreme contexts requires balancing computational efficiency with representational expressivity. While Transformers provide precise retrieval via the attention mechanism, their quadratic $\mathcal{O}(T^2)$ complexity limits their application to long-horizon tasks. In this work, we propose the \textbf{Spectral-Window Hybrid (SWH)}, an architecture that decouples sequence modeling into two \textit{parallel} streams: a global branch utilizing the Convolution Theorem to model long-range decay dynamics in $\mathcal{O}(T \log T)$ time, and a local branch employing sliding-window attention for token interactions within a bounded context. By aggregating these representations, SWH avoids the computational bottleneck of global attention while retaining local precision. We demonstrate that SWH matches the perplexity of standard Transformers on short contexts while enabling efficient linear scaling to extended sequences. The code is available at https://github.com/VladimerKhasia/SWH
Digital Twin AI: Opportunities and Challenges from Large Language Models to World Models
Venue: arXiv cs.AI 2026
Year: 2026

Digital twins, as precise digital representations of physical systems, have evolved from passive simulation tools into intelligent and autonomous entities through the integration of artificial intelligence technologies. This paper presents a unified four-stage framework that systematically characterizes AI integration across the digital twin lifecycle, spanning modeling, mirroring, intervention, and autonomous management. By synthesizing existing technologies and practices, we distill a unified four-stage framework that systematically characterizes how AI methodologies are embedded across the digital twin lifecycle: (1) modeling the physical twin through physics-based and physics-informed AI approaches, (2) mirroring the physical system into a digital twin with real-time synchronization, (3) intervening in the physical twin through predictive modeling, anomaly detection, and optimization strategies, and (4) achieving autonomous management through large language models, foundation models, and intelligent agents. We analyze the synergy between physics-based modeling and data-driven learning, highlighting the shift from traditional numerical solvers to physics-informed and foundation models for physical systems. Furthermore, we examine how generative AI technologies, including large language models and generative world models, transform digital twins into proactive and self-improving cognitive systems capable of reasoning, communication, and creative scenario generation. Through a cross-domain review spanning eleven application domains, including healthcare, aerospace, smart manufacturing, robotics, and smart cities, we identify common challenges related to scalability, explainability, and trustworthiness, and outline directions for responsible AI-driven digital twin systems.
From Classification to Generation: An Open-Ended Paradigm for Adverse Drug Reaction Prediction Based on Graph-Motif Feature Fusion
Venue: arXiv cs.LG 2026
Year: 2026

Computational biology offers immense potential for reducing the high costs and protracted cycles of new drug development through adverse drug reaction (ADR) prediction. However, current methods remain impeded by drug data scarcity-induced cold-start challenge, closed label sets, and inadequate modeling of label dependencies. Here we propose an open-ended ADR prediction paradigm based on Graph-Motif feature fusion and Multi-Label Generation (GM-MLG). Leveraging molecular structure as an intrinsic and inherent feature, GM-MLG constructs a dual-graph representation architecture spanning the atomic level, the local molecular level (utilizing fine-grained motifs dynamically extracted via the BRICS algorithm combined with additional fragmentation rules), and the global molecular level. Uniquely, GM-MLG pioneers transforming ADR prediction from multi-label classification into Transformer Decoder-based multi-label generation. By treating ADR labels as discrete token sequences, it employs positional embeddings to explicitly capture dependencies and co-occurrence relationships within large-scale label spaces, generating predictions via autoregressive decoding to dynamically expand the prediction space. Experiments demonstrate GM-MLG achieves up to 38% improvement and an average gain of 20%, expanding the prediction space from 200 to over 10,000 types. Furthermore, it elucidates non-linear structure-activity relationships between ADRs and motifs via retrosynthetic motif analysis, providing interpretable and innovative support for systematic risk reduction in drug safety.
Towards LLM-enabled autonomous combustion research: A literature-aware agent for self-corrective modeling workflows
Venue: arXiv cs.LG 2026
Year: 2026

The rapid evolution of large language models (LLMs) is transforming artificial intelligence into autonomous research partners, yet a critical gap persists in complex scientific domains such as combustion modeling. Here, practical AI assistance requires the seamless integration of domain literature knowledge with robust execution capabilities for expertise-intensive tools such as computational fluid dynamics (CFD) codes. To bridge this gap, we introduce FlamePilot, an LLM agent designed to empower combustion modeling research through automated and self-corrective CFD workflows. FlamePilot differentiates itself through an architecture that leverages atomic tools to ensure the robust setup and execution of complex simulations in both OpenFOAM and extended frameworks such as DeepFlame. The system is also capable of learning from scientific articles, extracting key information to guide the simulation from initial setup to optimized results. Validation on a public benchmark shows FlamePilot achieved a perfect 1.0 executability score and a 0.438 success rate, surpassing the prior best reported agent scores of 0.625 and 0.250, respectively. Furthermore, a detailed case study on Moderate or Intense Low-oxygen Dilution (MILD) combustion simulation demonstrates its efficacy as a collaborative research copilot, where FlamePilot autonomously translated a research paper into a configured simulation, conducted the simulation, post-processed the results, proposed evidence-based refinements, and managed a multi-step parameter study to convergence under minimal human intervention. By adopting a transparent and interpretable paradigm, FlamePilot establishes a foundational framework for AI-empowered combustion modeling, fostering a collaborative partnership where the agent manages workflow orchestration, freeing the researcher for high-level analysis.
A unified multimodal understanding and generation model for cross-disciplinary scientific research
Venue: arXiv cs.AI 2026
Year: 2026

Scientific discovery increasingly relies on integrating heterogeneous, high-dimensional data across disciplines nowadays. While AI models have achieved notable success across various scientific domains, they typically remain domain-specific or lack the capability of simultaneously understanding and generating multimodal scientific data, particularly for high-dimensional data. Yet, many pressing global challenges and scientific problems are inherently cross-disciplinary and require coordinated progress across multiple fields. Here, we present FuXi-Uni, a native unified multimodal model for scientific understanding and high-fidelity generation across scientific domains within a single architecture. Specifically, FuXi-Uni aligns cross-disciplinary scientific tokens within natural language tokens and employs science decoder to reconstruct scientific tokens, thereby supporting both natural language conversation and scientific numerical prediction. Empirically, we validate FuXi-Uni in Earth science and Biomedicine. In Earth system modeling, the model supports global weather forecasting, tropical cyclone (TC) forecast editing, and spatial downscaling driven by only language instructions. FuXi-Uni generates 10-day global forecasts at 0.25° resolution that outperform the SOTA physical forecasting system. It shows superior performance for both TC track and intensity prediction relative to the SOTA physical model, and generates high-resolution regional weather fields that surpass standard interpolation baselines. Regarding biomedicine, FuXi-Uni outperforms leading multimodal large language models on multiple biomedical visual question answering benchmarks. By unifying heterogeneous scientific modalities within a native shared latent space while maintaining strong domain-specific performance, FuXi-Uni provides a step forward more general-purpose, multimodal scientific models.
From Historical Puzzles to Grammatical Constraints: Circular Partitions, Generalized Run-Length Encodings, and Polynomial-Time Decidability
Venue: arXiv cs.FL 2026
Year: 2026

Motivated by a historical combinatorial problem that resembles the well-known Josephus problem, we investigate circular partition algorithms and formulate problems in deterministic finite automata with practical algorithms. The historical problem involves arranging individuals on a circle and eliminating every k-th person until a desired group remains. We analyze both removal and non-removal approaches to circular partitioning, establishing conditions for balanced partitions and providing explicit algorithms. We introduce generalized run-length encodings over partitioned alphabets to capture alternating letter patterns, computing their cardinalities using Stirling numbers of the second kind. Connecting these combinatorial structures to formal language theory, we formulate an existence problem: given a context-free grammar over a dictionary and block-pattern constraints on letters, does a valid sentence exist? We prove decidability in polynomial time by showing block languages are regular and applying standard parsing techniques. Complete algorithms with complexity analysis are provided and validated through implementation on both historical and synthetic instances.
Data Complexity-aware Deep Model Performance Forecasting
Venue: arXiv cs.LG 2026
Year: 2026

Deep learning models are widely used across computer vision and other domains. When working on the model induction, selecting the right architecture for a given dataset often relies on repetitive trial-and-error procedures. This procedure is time-consuming, resource-intensive, and difficult to automate. While previous work has explored performance prediction using partial training or complex simulations, these methods often require significant computational overhead or lack generalizability. In this work, we propose an alternative approach: a lightweight, two-stage framework that can estimate model performance before training given the understanding of the dataset and the focused deep model structures. The first stage predicts a baseline based on the analysis of some measurable properties of the dataset, while the second stage adjusts the estimation with additional information on the model's architectural and hyperparameter details. The setup allows the framework to generalize across datasets and model types. Moreover, we find that some of the underlying features used for prediction - such as dataset variance - can offer practical guidance for model selection, and can serve as early indicators of data quality. As a result, the framework can be used not only to forecast model performance, but also to guide architecture choices, inform necessary preprocessing procedures, and detect potentially problematic datasets before training begins.
ParkGaussian: Surround-view 3D Gaussian Splatting for Autonomous Parking
Venue: arXiv cs.CV 2026
Year: 2026

Parking is a critical task for autonomous driving systems (ADS), with unique challenges in crowded parking slots and GPS-denied environments. However, existing works focus on 2D parking slot perception, mapping, and localization, 3D reconstruction remains underexplored, which is crucial for capturing complex spatial geometry in parking scenarios. Naively improving the visual quality of reconstructed parking scenes does not directly benefit autonomous parking, as the key entry point for parking is the slots perception module. To address these limitations, we curate the first benchmark named ParkRecon3D, specifically designed for parking scene reconstruction. It includes sensor data from four surround-view fisheye cameras with calibrated extrinsics and dense parking slot annotations. We then propose ParkGaussian, the first framework that integrates 3D Gaussian Splatting (3DGS) for parking scene reconstruction. To further improve the alignment between reconstruction and downstream parking slot detection, we introduce a slot-aware reconstruction strategy that leverages existing parking perception methods to enhance the synthesis quality of slot regions. Experiments on ParkRecon3D demonstrate that ParkGaussian achieves state-of-the-art reconstruction quality and better preserves perception consistency for downstream tasks. The code and dataset will be released at: https://github.com/wm-research/ParkGaussian
Scale-Adaptive Power Flow Analysis with Local Topology Slicing and Multi-Task Graph Learning
Venue: arXiv cs.LG 2026
Year: 2026

Developing deep learning models with strong adaptability to topological variations is of great practical significance for power flow analysis. To enhance model performance under variable system scales and improve robustness in branch power prediction, this paper proposes a Scale-adaptive Multi-task Power Flow Analysis (SaMPFA) framework. SaMPFA introduces a Local Topology Slicing (LTS) sampling technique that extracts subgraphs of different scales from the complete power network to strengthen the model's cross-scale learning capability. Furthermore, a Reference-free Multi-task Graph Learning (RMGL) model is designed for robust power flow prediction. Unlike existing approaches, RMGL predicts bus voltages and branch powers instead of phase angles. This design not only avoids the risk of error amplification in branch power calculation but also guides the model to learn the physical relationships of phase angle differences. In addition, the loss function incorporates extra terms that encourage the model to capture the physical patterns of angle differences and power transmission, further improving consistency between predictions and physical laws. Simulations on the IEEE 39-bus system and a real provincial grid in China demonstrate that the proposed model achieves superior adaptability and generalization under variable system scales, with accuracy improvements of 4.47% and 36.82%, respectively.