OpenRaiser/Intern-Atlas huggingface dataset:
Large Language Models for History, Philosophy, and Sociology of Science: Interpretive Uses, Methodological Challenges, and Critical Perspectives
Venue: arXiv cs.CL 2025
Year: 2025

This paper explores the use of large language models (LLMs) as research tools in the history, philosophy, and sociology of science (HPSS). LLMs are remarkably effective at processing unstructured text and inferring meaning from context, offering new affordances that challenge long-standing divides between computational and interpretive methods. This raises both opportunities and challenges for HPSS, which emphasizes interpretive methodologies and understands meaning as context-dependent, ambiguous, and historically situated. We argue that HPSS is uniquely positioned not only to benefit from LLMs' capabilities but also to interrogate their epistemic assumptions and infrastructural implications. To this end, we first offer a concise primer on LLM architectures and training paradigms tailored to non-technical readers. We frame LLMs not as neutral tools but as epistemic infrastructures that encode assumptions about meaning, context, and similarity, conditioned by their training data, architecture, and patterns of use. We then examine how computational techniques enhanced by LLMs, such as structuring data, detecting patterns, and modeling dynamic processes, can be applied to support interpretive research in HPSS. Our analysis compares full-context and generative models, outlines strategies for domain and task adaptation (e.g., continued pretraining, fine-tuning, and retrieval-augmented generation), and evaluates their respective strengths and limitations for interpretive inquiry in HPSS. We conclude with four lessons for integrating LLMs into HPSS: (1) model selection involves interpretive trade-offs; (2) LLM literacy is foundational; (3) HPSS must define its own benchmarks and corpora; and (4) LLMs should enhance, not replace, interpretive methods.
Interpretable Classification of Levantine Ceramic Thin Sections via Neural Networks
Venue: arXiv cs.CE 2025
Year: 2025

Classification of ceramic thin sections is fundamental for understanding ancient pottery production techniques, provenance, and trade networks. Although effective, traditional petrographic analysis is time-consuming. This study explores the application of deep learning models, specifically Convolutional Neural Networks (CNNs) and Vision Transformers (ViTs), as complementary tools to support the classification of Levantine ceramics based on their petrographic fabrics. A dataset of 1,424 thin section images from 178 ceramic samples belonging to several archaeological sites across the Levantine area, mostly from the Bronze Age, with few samples dating to the Iron Age, was used to train and evaluate these models. The results demonstrate that transfer learning significantly improves classification performance, with a ResNet18 model achieving 92.11% accuracy and a ViT reaching 88.34%. Explainability techniques, including Guided Grad-CAM and attention maps, were applied to interpret and visualize the models' decisions, revealing that both CNNs and ViTs successfully focus on key mineralogical features for the classification of the samples into their respective petrographic fabrics. These findings highlight the potential of explainable AI in archaeometric studies, providing a reproducible and efficient methodology for ceramic analysis while maintaining transparency in model decision-making.
A Collaborative Process Parameter Recommender System for Fleets of Networked Manufacturing Machines -- with Application to 3D Printing
Venue: arXiv cs.LG 2025
Year: 2025

Fleets of networked manufacturing machines of the same type, that are collocated or geographically distributed, are growing in popularity. An excellent example is the rise of 3D printing farms, which consist of multiple networked 3D printers operating in parallel, enabling faster production and efficient mass customization. However, optimizing process parameters across a fleet of manufacturing machines, even of the same type, remains a challenge due to machine-to-machine variability. Traditional trial-and-error approaches are inefficient, requiring extensive testing to determine optimal process parameters for an entire fleet. In this work, we introduce a machine learning-based collaborative recommender system that optimizes process parameters for each machine in a fleet by modeling the problem as a sequential matrix completion task. Our approach leverages spectral clustering and alternating least squares to iteratively refine parameter predictions, enabling real-time collaboration among the machines in a fleet while minimizing the number of experimental trials. We validate our method using a mini 3D printing farm consisting of ten 3D printers for which we optimize acceleration and speed settings to maximize print quality and productivity. Our approach achieves significantly faster convergence to optimal process parameters compared to non-collaborative matrix completion.
A Survey of Foundation Models for IoT: Taxonomy and Criteria-Based Analysis
Venue: arXiv cs.LG 2025
Year: 2025

Foundation models have gained growing interest in the IoT domain due to their reduced reliance on labeled data and strong generalizability across tasks, which address key limitations of traditional machine learning approaches. However, most existing foundation model based methods are developed for specific IoT tasks, making it difficult to compare approaches across IoT domains and limiting guidance for applying them to new tasks. This survey aims to bridge this gap by providing a comprehensive overview of current methodologies and organizing them around four shared performance objectives by different domains: efficiency, context-awareness, safety, and security & privacy. For each objective, we review representative works, summarize commonly-used techniques and evaluation metrics. This objective-centric organization enables meaningful cross-domain comparisons and offers practical insights for selecting and designing foundation model based solutions for new IoT tasks. We conclude with key directions for future research to guide both practitioners and researchers in advancing the use of foundation models in IoT applications.
A Novel Thermal Network Model and Electro-Thermal Coupling Study for NSFETs and CFETs Considering Thermal Crosstalk
Venue: arXiv cs.ET 2025
Year: 2025

As the technology node continues to shrink, nanosheet field effect transistors (NSFETs) and complementary FETs (CFETs) become valid candidates for the 3nm and sub-nanometre nodes. However, due to the shrinking device size, self-heating and inter-device thermal crosstalk of NSFETs and CFETs become more severe. It is important to accurately calculate the self-heating and thermal crosstalk of devices and to study the electrical and thermal characteristics of logic gates, etc. In this work, a thermal network model considering the thermal crosstalk of neighboring devices is proposed, which can accurately calculate the self-heating and thermal crosstalk. The electrical and thermal characteristics of NSFETs and CFETs are compared, and it is found that CFETs have more severe self-heating and thermal crosstalk. The electro-thermal characteristics of inverters, logic gates and ring oscillators composed of NSFETs and CFETs are further investigated. Compared with NSFETs, logic gates and ring oscillators composed of CFETs are more seriously affected by self-heating and should be given extra attention. The thermal network model proposed in this paper can be further used to study the thermal optimization strategy of devices and circuits to enhance the electrical performance, achieving the design technology co-optimizations (DTCO).
The Behavior Gap: Evaluating Zero-shot LLM Agents in Complex Task-Oriented Dialogs
Venue: arXiv cs.CL 2025
Year: 2025

Large Language Model (LLM)-based agents have significantly impacted Task-Oriented Dialog Systems (TODS) but continue to face notable performance challenges, especially in zero-shot scenarios. While prior work has noted this performance gap, the behavioral factors driving the performance gap remain under-explored. This study proposes a comprehensive evaluation framework to quantify the behavior gap between AI agents and human experts, focusing on discrepancies in dialog acts, tool usage, and knowledge utilization. Our findings reveal that this behavior gap is a critical factor negatively impacting the performance of LLM agents. Notably, as task complexity increases, the behavior gap widens (correlation: 0.963), leading to a degradation of agent performance on complex task-oriented dialogs. For the most complex task in our study, even the GPT-4o-based agent exhibits low alignment with human behavior, with low F1 scores for dialog acts (0.464), excessive and often misaligned tool usage with a F1 score of 0.139, and ineffective usage of external knowledge. Reducing such behavior gaps leads to significant performance improvement (24.3% on average). This study highlights the importance of comprehensive behavioral evaluations and improved alignment strategies to enhance the effectiveness of LLM-based TODS in handling complex tasks.
Unveiling Confirmation Bias in Chain-of-Thought Reasoning
Venue: arXiv cs.LG 2025
Year: 2025

Chain-of-thought (CoT) prompting has been widely adopted to enhance the reasoning capabilities of large language models (LLMs). However, the effectiveness of CoT reasoning is inconsistent across tasks with different reasoning types. This work presents a novel perspective to understand CoT behavior through the lens of \textit{confirmation bias} in cognitive psychology. Specifically, we examine how model internal beliefs, approximated by direct question-answering probabilities, affect both reasoning generation ($Q \to R$) and reasoning-guided answer prediction ($QR \to A$) in CoT. By decomposing CoT into a two-stage process, we conduct a thorough correlation analysis in model beliefs, rationale attributes, and stage-wise performance. Our results provide strong evidence of confirmation bias in LLMs, such that model beliefs not only skew the reasoning process but also influence how rationales are utilized for answer prediction. Furthermore, the interplay between task vulnerability to confirmation bias and the strength of beliefs also provides explanations for CoT effectiveness across reasoning tasks and models. Overall, this study provides a valuable insight for the needs of better prompting strategies that mitigate confirmation bias to enhance reasoning performance. Code is available at \textit{https://github.com/yuewan2/biasedcot}.
Phonikud: Hebrew Grapheme-to-Phoneme Conversion for Real-Time Text-to-Speech
Venue: arXiv cs.CL 2025
Year: 2025

Real-time text-to-speech (TTS) for Modern Hebrew is challenging due to the language's orthographic complexity. Existing solutions ignore crucial phonetic features such as stress that remain underspecified even when vowel marks are added. To address these limitations, we introduce Phonikud, a lightweight, open-source Hebrew grapheme-to-phoneme (G2P) system that outputs fully-specified IPA transcriptions. Our approach adapts an existing diacritization model with lightweight adaptors, incurring negligible additional latency. We also contribute the ILSpeech dataset of transcribed Hebrew speech with IPA annotations, serving as a benchmark for Hebrew G2P, as training data for TTS systems, and enabling audio-to-IPA for evaluating TTS performance while capturing important phonetic details. Our results demonstrate that Phonikud G2P conversion more accurately predicts phonemes from Hebrew text compared to prior methods, and that this enables training of effective real-time Hebrew TTS models with superior speed-accuracy trade-offs. We release our code, data, and models at https: //phonikud.github.io.
The Foundation Cracks: A Comprehensive Study on Bugs and Testing Practices in LLM Libraries
Venue: arXiv cs.SE 2025
Year: 2025

Large Language Model (LLM) libraries have emerged as the foundational infrastructure powering today's AI revolution, serving as the backbone for LLM deployment, inference optimization, fine-tuning, and production serving across diverse applications. Despite their critical role in the LLM ecosystem, these libraries face frequent quality issues and bugs that threaten the reliability of AI systems built upon them. To address this knowledge gap, we present the first comprehensive empirical investigation into bug characteristics and testing practices in modern LLM libraries. We examine 313 bug-fixing commits extracted across two widely-adopted LLM libraries: HuggingFace Transformers and vLLM.Through rigorous manual analysis, we establish comprehensive taxonomies categorizing bug symptoms into 5 types and root causes into 14 distinct categories.Our primary discovery shows that API misuse has emerged as the predominant root cause (32.17%-48.19%), representing a notable transition from algorithm-focused defects in conventional deep learning frameworks toward interface-oriented problems. Additionally, we examine 7,748 test functions to identify 7 distinct test oracle categories employed in current testing approaches, with predefined expected outputs (such as specific tensors and text strings) being the most common strategy. Our assessment of existing testing effectiveness demonstrates that the majority of bugs escape detection due to inadequate test cases (41.73%), lack of test drivers (32.37%), and weak test oracles (25.90%). Drawing from these findings, we offer some recommendations for enhancing LLM library quality assurance.
Machine Learning Methods for Small Data and Upstream Bioprocessing Applications: A Comprehensive Review
Venue: arXiv cs.LG 2025
Year: 2025

Data is crucial for machine learning (ML) applications, yet acquiring large datasets can be costly and time-consuming, especially in complex, resource-intensive fields like biopharmaceuticals. A key process in this industry is upstream bioprocessing, where living cells are cultivated and optimised to produce therapeutic proteins and biologics. The intricate nature of these processes, combined with high resource demands, often limits data collection, resulting in smaller datasets. This comprehensive review explores ML methods designed to address the challenges posed by small data and classifies them into a taxonomy to guide practical applications. Furthermore, each method in the taxonomy was thoroughly analysed, with a detailed discussion of its core concepts and an evaluation of its effectiveness in tackling small data challenges, as demonstrated by application results in the upstream bioprocessing and other related domains. By analysing how these methods tackle small data challenges from different perspectives, this review provides actionable insights, identifies current research gaps, and offers guidance for leveraging ML in data-constrained environments.
Intersectional Bias in Japanese Large Language Models from a Contextualized Perspective
Venue: arXiv cs.CL 2025
Year: 2025

An increasing number of studies have examined the social bias of rapidly developed large language models (LLMs). Although most of these studies have focused on bias occurring in a single social attribute, research in social science has shown that social bias often occurs in the form of intersectionality -- the constitutive and contextualized perspective on bias aroused by social attributes. In this study, we construct the Japanese benchmark inter-JBBQ, designed to evaluate the intersectional bias in LLMs on the question-answering setting. Using inter-JBBQ to analyze GPT-4o and Swallow, we find that biased output varies according to its contexts even with the equal combination of social attributes.
IndoorWorld: Integrating Physical Task Solving and Social Simulation in A Heterogeneous Multi-Agent Environment
Venue: arXiv cs.MA 2025
Year: 2025

Virtual environments are essential to AI agent research. Existing environments for LLM agent research typically focus on either physical task solving or social simulation, with the former oversimplifying agent individuality and social dynamics, and the latter lacking physical grounding of social behaviors. We introduce IndoorWorld, a heterogeneous multi-agent environment that tightly integrates physical and social dynamics. By introducing novel challenges for LLM-driven agents in orchestrating social dynamics to influence physical environments and anchoring social interactions within world states, IndoorWorld opens up possibilities of LLM-based building occupant simulation for architectural design. We demonstrate the potential with a series of experiments within an office setting to examine the impact of multi-agent collaboration, resource competition, and spatial layout on agent behavior.
Benchmarking the Trustworthiness in Multimodal LLMs for Video Understanding
Venue: arXiv cs.CV 2025
Year: 2025

Recent advancements in multimodal large language models for video understanding (videoLLMs) have enhanced their capacity to process complex spatiotemporal data. However, challenges such as factual inaccuracies, harmful content, biases, hallucinations, and privacy risks compromise their reliability. This study introduces Trust-videoLLMs, a first comprehensive benchmark evaluating 23 state-of-the-art videoLLMs (5 commercial, 18 open-source) across five critical dimensions: truthfulness, robustness, safety, fairness, and privacy. Comprising 30 tasks with adapted, synthetic, and annotated videos, the framework assesses spatiotemporal risks, temporal consistency and cross-modal impact. Results reveal significant limitations in dynamic scene comprehension, cross-modal perturbation resilience and real-world risk mitigation. While open-source models occasionally outperform, proprietary models generally exhibit superior credibility, though scaling does not consistently improve performance. These findings underscore the need for enhanced training datat diversity and robust multimodal alignment. Trust-videoLLMs provides a publicly available, extensible toolkit for standardized trustworthiness assessments, addressing the critical gap between accuracy-focused benchmarks and demands for robustness, safety, fairness, and privacy.
Restoring Gaussian Blurred Face Images for Deanonymization Attacks
Venue: arXiv cs.CR 2025
Year: 2025

Gaussian blur is widely used to blur human faces in sensitive photos before the photos are posted on the Internet. However, it is unclear to what extent the blurred faces can be restored and used to re-identify the person, especially under a high-blurring setting. In this paper, we explore this question by developing a deblurring method called Revelio. The key intuition is to leverage a generative model's memorization effect and approximate the inverse function of Gaussian blur for face restoration. Compared with existing methods, we design the deblurring process to be identity-preserving. It uses a conditional Diffusion model for preliminary face restoration and then uses an identity retrieval model to retrieve related images to further enhance fidelity. We evaluate Revelio with large public face image datasets and show that it can effectively restore blurred faces, especially under a high-blurring setting. It has a re-identification accuracy of 95.9%, outperforming existing solutions. The result suggests that Gaussian blur should not be used for face anonymization purposes. We also demonstrate the robustness of this method against mismatched Gaussian kernel sizes and functions, and test preliminary countermeasures and adaptive attacks to inspire future work.
Relative Entropy Regularized Reinforcement Learning for Efficient Encrypted Policy Synthesis
Venue: arXiv cs.LG 2025
Year: 2025

We propose an efficient encrypted policy synthesis to develop privacy-preserving model-based reinforcement learning. We first demonstrate that the relative-entropy-regularized reinforcement learning framework offers a computationally convenient linear and ``min-free'' structure for value iteration, enabling a direct and efficient integration of fully homomorphic encryption with bootstrapping into policy synthesis. Convergence and error bounds are analyzed as encrypted policy synthesis propagates errors under the presence of encryption-induced errors including quantization and bootstrapping. Theoretical analysis is validated by numerical simulations. Results demonstrate the effectiveness of the RERL framework in integrating FHE for encrypted policy synthesis.
Hierarchical Deep Feature Fusion and Ensemble Learning for Enhanced Brain Tumor MRI Classification
Venue: arXiv cs.CV 2025
Year: 2025

Accurate brain tumor classification is crucial in medical imaging to ensure reliable diagnosis and effective treatment planning. This study introduces a novel double ensembling framework that synergistically combines pre-trained deep learning (DL) models for feature extraction with optimized machine learning (ML) classifiers for robust classification. The framework incorporates comprehensive preprocessing and data augmentation of brain magnetic resonance images (MRI), followed by deep feature extraction using transfer learning with pre-trained Vision Transformer (ViT) networks. The novelty lies in the dual-level ensembling strategy: feature-level ensembling, which integrates deep features from the top-performing ViT models, and classifier-level ensembling, which aggregates predictions from hyperparameter-optimized ML classifiers. Experiments on two public Kaggle MRI brain tumor datasets demonstrate that this approach significantly surpasses state-of-the-art methods, underscoring the importance of feature and classifier fusion. The proposed methodology also highlights the critical roles of hyperparameter optimization (HPO) and advanced preprocessing techniques in improving diagnostic accuracy and reliability, advancing the integration of DL and ML for clinically relevant medical image analysis.
Stacked Intelligent Metasurfaces for Multi-Modal Semantic Communications
Venue: arXiv cs.IT 2025
Year: 2025

Semantic communication (SemCom) powered by generative artificial intelligence enables highly efficient and reliable information transmission. However, it still necessitates the transmission of substantial amounts of data when dealing with complex scene information. In contrast, the stacked intelligent metasurface (SIM), leveraging wave-domain computing, provides a cost-effective solution for directly imaging complex scenes. Building on this concept, we propose an innovative SIM-aided multi-modal SemCom system. Specifically, an SIM is positioned in front of the transmit antenna for transmitting visual semantic information of complex scenes via imaging on the uniform planar array at the receiver. Furthermore, the simple scene description that contains textual semantic information is transmitted via amplitude-phase modulation over electromagnetic waves. To simultaneously transmit multi-modal information, we optimize the amplitude and phase of meta-atoms in the SIM using a customized gradient descent algorithm. The optimization aims to gradually minimize the mean squared error between the normalized energy distribution on the receiver array and the desired pattern corresponding to the visual semantic information. By combining the textual and visual semantic information, a conditional generative adversarial network is used to recover the complex scene accurately. Extensive numerical results verify the effectiveness of the proposed multi-modal SemCom system in reducing bandwidth overhead as well as the capability of the SIM for imaging the complex scene.