OpenRaiser/Intern-Atlas huggingface dataset:
Fusion-Driven Tree Reconstruction and Fruit Localization: Advancing Precision in Agriculture
Venue: arXiv cs.RO 2024
Year: 2024

Fruit distribution is pivotal in shaping the future of both agriculture and agricultural robotics, paving the way for a streamlined supply chain. This study introduces an innovative methodology that harnesses the synergy of RGB imagery, LiDAR, and IMU data, to achieve intricate tree reconstructions and the pinpoint localization of fruits. Such integration not only offers insights into the fruit distribution, which enhances the precision of guidance for agricultural robotics and automation systems, but also sets the stage for simulating synthetic fruit patterns across varied tree architectures. To validate this approach, experiments have been carried out in both a controlled environment and an actual peach orchard. The results underscore the robustness and efficacy of this fusion-driven methodology, highlighting its potential as a transformative tool for future agricultural robotics and precision farming.
SAM-Med3D: Towards General-purpose Segmentation Models for Volumetric Medical Images
Venue: arXiv cs.CV 2024
Year: 2024

Existing volumetric medical image segmentation models are typically task-specific, excelling at specific target but struggling to generalize across anatomical structures or modalities. This limitation restricts their broader clinical use. In this paper, we introduce SAM-Med3D for general-purpose segmentation on volumetric medical images. Given only a few 3D prompt points, SAM-Med3D can accurately segment diverse anatomical structures and lesions across various modalities. To achieve this, we gather and process a large-scale 3D medical image dataset, SA-Med3D-140K, from a blend of public sources and licensed private datasets. This dataset includes 22K 3D images and 143K corresponding 3D masks. Then SAM-Med3D, a promptable segmentation model characterized by the fully learnable 3D structure, is trained on this dataset using a two-stage procedure and exhibits impressive performance on both seen and unseen segmentation targets. We comprehensively evaluate SAM-Med3D on 16 datasets covering diverse medical scenarios, including different anatomical structures, modalities, targets, and zero-shot transferability to new/unseen tasks. The evaluation shows the efficiency and efficacy of SAM-Med3D, as well as its promising application to diverse downstream tasks as a pre-trained model. Our approach demonstrates that substantial medical resources can be utilized to develop a general-purpose medical AI for various potential applications. Our dataset, code, and models are available at https://github.com/uni-medical/SAM-Med3D.
3D Multi-Target Localization Via Intelligent Reflecting Surface: Protocol and Analysis
Venue: arXiv cs.IT 2024
Year: 2024

With the emerging environment-aware applications, ubiquitous sensing is expected to play a key role in future networks. In this paper, we study a 3-dimensional (3D) multi-target localization system where multiple intelligent reflecting surfaces (IRSs) are applied to create virtual line-of-sight (LoS) links that bypass the base station (BS) and targets. To fully unveil the fundamental limit of IRS for sensing, we first study a single-target-single-IRS case and propose a novel \textit{two-stage localization protocol} by controlling the on/off state of IRS. To be specific, in the IRS-off stage, we derive the Cramér-Rao bound (CRB) of the azimuth/elevation direction-of-arrival (DoA) of the BS-target link and design a DoA estimator based on the MUSIC algorithm. In the IRS-on stage, the CRB of the azimuth/elevation DoA of the IRS-target link is derived and a simple DoA estimator based on the on-grid IRS beam scanning method is proposed. Particularly, the impact of echo signals reflected by IRS from different paths on sensing performance is analyzed. Moreover, we prove that the single-beam of the IRS is not capable of sensing, but it can be achieved with \textit{multi-beam}. Based on the two obtained DoAs, the 3D single-target location is constructed. We then extend to the multi-target-multi-IRS case and propose an \textit{IRS-adaptive sensing protocol} by controlling the on/off state of multiple IRSs, and a multi-target localization algorithm is developed. Simulation results demonstrate the effectiveness of our scheme and show that sub-meter-level positioning accuracy can be achieved.
Breaking of brightness consistency in optical flow with a lightweight CNN network
Venue: arXiv cs.CV 2024
Year: 2024

Sparse optical flow is widely used in various computer vision tasks, however assuming brightness consistency limits its performance in High Dynamic Range (HDR) environments. In this work, a lightweight network is used to extract illumination robust convolutional features and corners with strong invariance. Modifying the typical brightness consistency of the optical flow method to the convolutional feature consistency yields the light-robust hybrid optical flow method. The proposed network runs at 190 FPS on a commercial CPU because it uses only four convolutional layers to extract feature maps and score maps simultaneously. Since the shallow network is difficult to train directly, a deep network is designed to compute the reliability map that helps it. An end-to-end unsupervised training mode is used for both networks. To validate the proposed method, we compare corner repeatability and matching performance with origin optical flow under dynamic illumination. In addition, a more accurate visual inertial system is constructed by replacing the optical flow method in VINS-Mono. In a public HDR dataset, it reduces translation errors by 93\%. The code is publicly available at https://github.com/linyicheng1/LET-NET.
User Clustering for Coexistence between Near-field and Far-field Communications
Venue: arXiv cs.IT 2024
Year: 2024

This letter investigates the coexistence between near-field (NF) and far-field (FF) communications, where multiple FF users are clustered to be served on the beams of legacy NF users, via non-orthogonal multiple access (NOMA). Three different successive interference cancellation (SIC) decoding strategies are proposed and a sum rate maximization problem is formulated to optimize the beam assignment and decoding order. The beam assignment problem is further reformulated as an overlapping coalitional game, which facilitates the design of the proposed clustering algorithm. The optimal decoding order in each cluster is also derived, which can be integrated into the proposed clustering. Simulation results demonstrate that the proposed clustering algorithm is able to significantly improve the sum rate of the considered system, and the developed strategies achieve different trade-offs between sum rate and fairness.
On Responsible Machine Learning Datasets with Fairness, Privacy, and Regulatory Norms
Venue: arXiv cs.LG 2024
Year: 2024

Artificial Intelligence (AI) has made its way into various scientific fields, providing astonishing improvements over existing algorithms for a wide variety of tasks. In recent years, there have been severe concerns over the trustworthiness of AI technologies. The scientific community has focused on the development of trustworthy AI algorithms. However, machine and deep learning algorithms, popular in the AI community today, depend heavily on the data used during their development. These learning algorithms identify patterns in the data, learning the behavioral objective. Any flaws in the data have the potential to translate directly into algorithms. In this study, we discuss the importance of Responsible Machine Learning Datasets and propose a framework to evaluate the datasets through a responsible rubric. While existing work focuses on the post-hoc evaluation of algorithms for their trustworthiness, we provide a framework that considers the data component separately to understand its role in the algorithm. We discuss responsible datasets through the lens of fairness, privacy, and regulatory compliance and provide recommendations for constructing future datasets. After surveying over 100 datasets, we use 60 datasets for analysis and demonstrate that none of these datasets is immune to issues of fairness, privacy preservation, and regulatory compliance. We provide modifications to the ``datasheets for datasets" with important additions for improved dataset documentation. With governments around the world regularizing data protection laws, the method for the creation of datasets in the scientific community requires revision. We believe this study is timely and relevant in today's era of AI.
NoteChat: A Dataset of Synthetic Doctor-Patient Conversations Conditioned on Clinical Notes
Venue: arXiv cs.CL 2024
Year: 2024

We introduce NoteChat, a novel cooperative multi-agent framework leveraging Large Language Models (LLMs) to generate patient-physician dialogues. NoteChat embodies the principle that an ensemble of role-specific LLMs, through structured role-play and strategic prompting, can perform their assigned roles more effectively. The synergy among these role-playing LLMs results in a cohesive and efficient dialogue generation. Evaluation on MTS-dialogue, a benchmark dataset for patient-physician dialogues-note pairs, shows that models trained with the augmented synthetic patient-physician dialogues by NoteChat outperforms other state-of-the-art models for generating clinical notes. Our comprehensive automatic and human evaluation demonstrates that NoteChat substantially surpasses state-of-the-art models like ChatGPT and GPT-4 up to 22.78% by domain experts in generating superior synthetic patient-physician dialogues based on clinical notes. NoteChat has the potential to engage patients directly and help clinical documentation, a leading cause of physician burnout.
FloCoDe: Unbiased Dynamic Scene Graph Generation with Temporal Consistency and Correlation Debiasing
Venue: arXiv cs.CV 2024
Year: 2024

Dynamic scene graph generation (SGG) from videos requires not only a comprehensive understanding of objects across scenes but also a method to capture the temporal motions and interactions with different objects. Moreover, the long-tailed distribution of visual relationships is a crucial bottleneck for most dynamic SGG methods. This is because many of them focus on capturing spatio-temporal context using complex architectures, leading to the generation of biased scene graphs. To address these challenges, we propose FloCoDe: Flow-aware Temporal Consistency and Correlation Debiasing with uncertainty attenuation for unbiased dynamic scene graphs. FloCoDe employs feature warping using flow to detect temporally consistent objects across frames. To address the long-tail issue of visual relationships, we propose correlation debiasing and a label correlation-based loss to learn unbiased relation representations for long-tailed classes. Specifically, we propose to incorporate label correlations using contrastive loss to capture commonly co-occurring relations, which aids in learning robust representations for long-tailed classes. Further, we adopt the uncertainty attenuation-based classifier framework to handle noisy annotations in the SGG data. Extensive experimental evaluation shows a performance gain as high as 4.1%, demonstrating the superiority of generating more unbiased scene graphs.
Compressed representation of brain genetic transcription
Venue: arXiv cs.LG 2024
Year: 2024

The architecture of the brain is too complex to be intuitively surveyable without the use of compressed representations that project its variation into a compact, navigable space. The task is especially challenging with high-dimensional data, such as gene expression, where the joint complexity of anatomical and transcriptional patterns demands maximum compression. Established practice is to use standard principal component analysis (PCA), whose computational felicity is offset by limited expressivity, especially at great compression ratios. Employing whole-brain, voxel-wise Allen Brain Atlas transcription data, here we systematically compare compressed representations based on the most widely supported linear and non-linear methods-PCA, kernel PCA, non-negative matrix factorization (NMF), t-stochastic neighbour embedding (t-SNE), uniform manifold approximation and projection (UMAP), and deep auto-encoding-quantifying reconstruction fidelity, anatomical coherence, and predictive utility with respect to signalling, microstructural, and metabolic targets. We show that deep auto-encoders yield superior representations across all metrics of performance and target domains, supporting their use as the reference standard for representing transcription patterns in the human brain.
Hidden Citations Obscure True Impact in Science
Venue: arXiv cs.CL 2024
Year: 2024

References, the mechanism scientists rely on to signal previous knowledge, lately have turned into widely used and misused measures of scientific impact. Yet, when a discovery becomes common knowledge, citations suffer from obliteration by incorporation. This leads to the concept of hidden citation, representing a clear textual credit to a discovery without a reference to the publication embodying it. Here, we rely on unsupervised interpretable machine learning applied to the full text of each paper to systematically identify hidden citations. We find that for influential discoveries hidden citations outnumber citation counts, emerging regardless of publishing venue and discipline. We show that the prevalence of hidden citations is not driven by citation counts, but rather by the degree of the discourse on the topic within the text of the manuscripts, indicating that the more discussed is a discovery, the less visible it is to standard bibliometric analysis. Hidden citations indicate that bibliometric measures offer a limited perspective on quantifying the true impact of a discovery, raising the need to extract knowledge from the full text of the scientific corpus.
Knowledge Editing for Large Language Models: A Survey
Venue: arXiv cs.CL 2024
Year: 2024

Large language models (LLMs) have recently transformed both the academic and industrial landscapes due to their remarkable capacity to understand, analyze, and generate texts based on their vast knowledge and reasoning ability. Nevertheless, one major drawback of LLMs is their substantial computational cost for pre-training due to their unprecedented amounts of parameters. The disadvantage is exacerbated when new knowledge frequently needs to be introduced into the pre-trained model. Therefore, it is imperative to develop effective and efficient techniques to update pre-trained LLMs. Traditional methods encode new knowledge in pre-trained LLMs through direct fine-tuning. However, naively re-training LLMs can be computationally intensive and risks degenerating valuable pre-trained knowledge irrelevant to the update in the model. Recently, Knowledge-based Model Editing (KME) has attracted increasing attention, which aims to precisely modify the LLMs to incorporate specific knowledge, without negatively influencing other irrelevant knowledge. In this survey, we aim to provide a comprehensive and in-depth overview of recent advances in the field of KME. We first introduce a general formulation of KME to encompass different KME strategies. Afterward, we provide an innovative taxonomy of KME techniques based on how the new knowledge is introduced into pre-trained LLMs, and investigate existing KME strategies while analyzing key insights, advantages, and limitations of methods from each category. Moreover, representative metrics, datasets, and applications of KME are introduced accordingly. Finally, we provide an in-depth analysis regarding the practicality and remaining challenges of KME and suggest promising research directions for further advancement in this field.
Hierarchical Randomized Smoothing
Venue: arXiv cs.LG 2024
Year: 2024

Real-world data is complex and often consists of objects that can be decomposed into multiple entities (e.g. images into pixels, graphs into interconnected nodes). Randomized smoothing is a powerful framework for making models provably robust against small changes to their inputs - by guaranteeing robustness of the majority vote when randomly adding noise before classification. Yet, certifying robustness on such complex data via randomized smoothing is challenging when adversaries do not arbitrarily perturb entire objects (e.g. images) but only a subset of their entities (e.g. pixels). As a solution, we introduce hierarchical randomized smoothing: We partially smooth objects by adding random noise only on a randomly selected subset of their entities. By adding noise in a more targeted manner than existing methods we obtain stronger robustness guarantees while maintaining high accuracy. We initialize hierarchical smoothing using different noising distributions, yielding novel robustness certificates for discrete and continuous domains. We experimentally demonstrate the importance of hierarchical smoothing in image and node classification, where it yields superior robustness-accuracy trade-offs. Overall, hierarchical smoothing is an important contribution towards models that are both - certifiably robust to perturbations and accurate.
GlotLID: Language Identification for Low-Resource Languages
Venue: arXiv cs.CL 2024
Year: 2024

Several recent papers have published good solutions for language identification (LID) for about 300 high-resource and medium-resource languages. However, there is no LID available that (i) covers a wide range of low-resource languages, (ii) is rigorously evaluated and reliable and (iii) efficient and easy to use. Here, we publish GlotLID-M, an LID model that satisfies the desiderata of wide coverage, reliability and efficiency. It identifies 1665 languages, a large increase in coverage compared to prior work. In our experiments, GlotLID-M outperforms four baselines (CLD3, FT176, OpenLID and NLLB) when balancing F1 and false positive rate (FPR). We analyze the unique challenges that low-resource LID poses: incorrect corpus metadata, leakage from high-resource languages, difficulty separating closely related languages, handling of macrolanguage vs varieties and in general noisy data. We hope that integrating GlotLID-M into dataset creation pipelines will improve quality and enhance accessibility of NLP technology for low-resource languages and cultures. GlotLID-M model (including future versions), code, and list of data sources are available: https://github.com/cisnlp/GlotLID.
Student Classroom Behavior Detection based on Spatio-Temporal Network and Multi-Model Fusion
Venue: arXiv cs.CV 2024
Year: 2024

Using deep learning methods to detect students' classroom behavior automatically is a promising approach for analyzing their class performance and improving teaching effectiveness. However, the lack of publicly available spatio-temporal datasets on student behavior, as well as the high cost of manually labeling such datasets, pose significant challenges for researchers in this field. To address this issue, we proposed a method for extending the spatio-temporal behavior dataset in Student Classroom Scenarios (SCB-ST-Dataset4) through image dataset. Our SCB-ST-Dataset4 comprises 757265 images with 25810 labels, focusing on 3 behaviors: hand-raising, reading, writing. Our proposed method can rapidly generate spatio-temporal behavior datasets without requiring extra manual labeling. Furthermore, we proposed a Behavior Similarity Index (BSI) to explore the similarity of behaviors. We evaluated the dataset using the YOLOv5, YOLOv7, YOLOv8, and SlowFast algorithms, achieving a mean average precision (map) of up to 82.3%. Last, we fused multiple models to generate student behavior-related data from various perspectives. The experiment further demonstrates the effectiveness of our method. And SCB-ST-Dataset4 provides a robust foundation for future research in student behavior detection, potentially contributing to advancements in this field. The SCB-ST-Dataset4 is available for download at: https://github.com/Whiffe/SCB-dataset.
Stencil Matrixization
Venue: arXiv cs.DC 2024
Year: 2024

Current architectures are now equipped with matrix computation units designed to enhance AI and high-performance computing applications. Within these architectures, two fundamental instruction types are matrix multiplication and vector outer product, with the latter being lighter due to its vector inputs. This characteristic not only allows for the development of flexible algorithms beyond dense linear algebra computations but also offers greater potential for implementation optimization. Stencil computations, commonly found in scientific and engineering applications, involve nested loops. This paper introduces a novel stencil algorithm leveraging vector outer products. Unlike previous approaches, this algorithm emerges from the stencil definition in scatter mode and is initially formulated using vector outer product expressions. The implementation integrates a series of optimizations to enhance memory reference patterns, execution pipeline efficiency, and data reuse. These optimizations consider various algorithmic options and data sharing among input vectors. Evaluation conducted on a simulator demonstrates that our proposed design achieves significant speedup compared to vectorized stencil algorithms.
Faithful Path Language Modeling for Explainable Recommendation over Knowledge Graph
Venue: arXiv cs.IR 2024
Year: 2024

The integration of path reasoning with language modeling in recommender systems has shown promise for enhancing explainability but often struggles with the authenticity of the explanations provided. Traditional models modify their architecture to produce entities and relations alternately--for example, employing separate heads for each in the model--which does not ensure the authenticity of paths reflective of actual Knowledge Graph (KG) connections. This misalignment can lead to user distrust due to the generation of corrupted paths. Addressing this, we introduce PEARLM (Path-based Explainable-Accurate Recommender based on Language Modelling), which innovates with a Knowledge Graph Constraint Decoding (KGCD) mechanism. This mechanism ensures zero incidence of corrupted paths by enforcing adherence to valid KG connections at the decoding level, agnostic of the underlying model architecture. By integrating direct token embedding learning from KG paths, PEARLM not only guarantees the generation of plausible and verifiable explanations but also highly enhances recommendation accuracy. We validate the effectiveness of our approach through a rigorous empirical assessment, employing a newly proposed metric that quantifies the integrity of explanation paths. Our results demonstrate a significant improvement over existing methods, effectively eliminating the generation of inaccurate paths and advancing the state-of-the-art in explainable recommender systems.
Identification Capacity of the Discrete-Time Poisson Channel
Venue: arXiv cs.IT 2024
Year: 2024

Numerous applications in the field of molecular communications (MC) such as healthcare systems are often event-driven. The conventional Shannon capacity may not be the appropriate metric for assessing performance in such cases. We propose the identification (ID) capacity as an alternative metric. Particularly, we consider randomized identification (RI) over the discrete-time Poisson channel (DTPC), which is typically used as a model for MC systems that utilize molecule-counting receivers. In the ID paradigm, the receiver's focus is not on decoding the message sent. However, he wants to determine whether a message of particular significance to him has been sent or not. In contrast to Shannon transmission codes, the size of ID codes for a Discrete Memoryless Channel (DMC) grows doubly exponentially fast with the blocklength, if randomized encoding is used. In this paper, we derive the capacity formula for RI over the DTPC subject to some peak and average power constraints. Furthermore, we analyze the case of state-dependent DTPC.