OpenRaiser/Intern-Atlas huggingface dataset:
Class-Guided Image-to-Image Diffusion: Cell Painting from Brightfield Images with Class Labels
Venue: arXiv cs.CV 2023
Year: 2023

Image-to-image reconstruction problems with free or inexpensive metadata in the form of class labels appear often in biological and medical image domains. Existing text-guided or style-transfer image-to-image approaches do not translate to datasets where additional information is provided as discrete classes. We introduce and implement a model which combines image-to-image and class-guided denoising diffusion probabilistic models. We train our model on a real-world dataset of microscopy images used for drug discovery, with and without incorporating metadata labels. By exploring the properties of image-to-image diffusion with relevant labels, we show that class-guided image-to-image diffusion can improve the meaningful content of the reconstructed images and outperform the unguided model in useful downstream tasks.
A journey towards the most efficient state database for Hyperledger Fabric
Venue: arXiv cs.DC 2023
Year: 2023

The Hyperledger Fabric is well known and the most prominent enterprise-grade permissioned blockchain. The architecture of the Hyperledger Fabric introduces a new architecture paradigm of simulate-order-validate and pluggable architecture, allowing a greater level of customization where one of the critical components is the world state database, which is responsible for capturing the snapshot of the blockchain application state. Hyperledger Fabric manages the state with the key-value database abstraction and peer updates it after transactions have been validated and read from the state during simulation. Therefore, providing good performance during reading and writing impacts the system's overall performance. Currently, Hyperledger Fabric supports two different implementations of the state database. One is LevelDB, the embedded DB based on LSM trees and CouchDB. In this study, we would like to focus on searching and exploring the alternative implementation of a state database and analyze whenever there are better and more scalable options. We evaluated different databases to be plugged into Hyperledger Fabric, such as RocksDB, Boltdb, and BadgerDB. The study describes how to plug new state databases and performance results based on various workloads.
ROSE: A Neurocomputational Architecture for Syntax
Venue: arXiv cs.CL 2023
Year: 2023

A comprehensive model of natural language processing in the brain must accommodate four components: representations, operations, structures and encoding. It further requires a principled account of how these components mechanistically, and causally, relate to each another. While previous models have isolated regions of interest for structure-building and lexical access, many gaps remain with respect to bridging distinct scales of neural complexity. By expanding existing accounts of how neural oscillations can index various linguistic processes, this article proposes a neurocomputational architecture for syntax, termed the ROSE model (Representation, Operation, Structure, Encoding). Under ROSE, the basic data structures of syntax are atomic features, types of mental representations (R), and are coded at the single-unit and ensemble level. Elementary computations (O) that transform these units into manipulable objects accessible to subsequent structure-building levels are coded via high frequency gamma activity. Low frequency synchronization and cross-frequency coupling code for recursive categorial inferences (S). Distinct forms of low frequency coupling and phase-amplitude coupling (delta-theta coupling via pSTS-IFG; theta-gamma coupling via IFG to conceptual hubs) then encode these structures onto distinct workspaces (E). Causally connecting R to O is spike-phase/LFP coupling; connecting O to S is phase-amplitude coupling; connecting S to E is a system of frontotemporal traveling oscillations; connecting E to lower levels is low-frequency phase resetting of spike-LFP coupling. ROSE is reliant on neurophysiologically plausible mechanisms, is supported at all four levels by a range of recent empirical research, and provides an anatomically precise and falsifiable grounding for the basic property of natural language syntax: hierarchical, recursive structure-building.
The W3C Data Catalog Vocabulary, Version 2: Rationale, Design Principles, and Uptake
Venue: arXiv cs.DL 2023
Year: 2023

DCAT is an RDF vocabulary designed to facilitate interoperability between data catalogs published on the Web. Since its first release in 2014 as a W3C Recommendation, DCAT has seen a wide adoption across communities and domains, particularly in conjunction with implementing the FAIR data principles (for findable, accessible, interoperable and reusable data). These implementation experiences, besides demonstrating the fitness of DCAT to meet its intended purpose, helped identify existing issues and gaps. Moreover, over the last few years, additional requirements emerged in data catalogs, given the increasing practice of documenting not only datasets but also data services and APIs. This paper illustrates the new version of DCAT, explaining the rationale behind its main revisions and extensions, based on the collected use cases and requirements, and outlines the issues yet to be addressed in future versions of DCAT.
Contextual Trust
Venue: arXiv cs.AI 2023
Year: 2023

Trust is an important aspect of human life. It provides instrumental value in allowing us to collaborate on and defer actions to others, and intrinsic value in our intimate relationships with romantic partners, family, and friends. In this paper I examine the nature of trust from a philosophical perspective. Specifically I propose to view trust as a context-sensitive state in a manner that will be made precise. The contribution of this paper is threefold. First, I make the simple observation that an individual's trust is typically both action- and context-sensitive. Action-sensitivity means that trust may obtain between a given truster and trustee for only certain actions. Context-sensitivity means that trust may obtain between a given truster and trustee, regarding the same action, in some conditions and not others. I also opine about what kinds of things may play the role of the truster, trustee, and action. Second, I advance a theory for the nature of contextual trust. I propose that the answer to "What does it mean for $A$ to trust $B$ to do $X$ in context $C$?" has two conditions. First, $A$ must take $B$'s doing $X$ as a means towards one of $A$'s ends. Second, $A$ must adopt an unquestioning attitude concerning $B$'s doing $X$ in context $C$. This unquestioning attitude is similar to the attitude introduced in Nguyen 2021. Finally, we explore how contextual trust can help us make sense of trust in general non-interpersonal settings, notably that of artificial intelligence (AI) systems. The field of Explainable Artificial Intelligence (XAI) assigns paramount importance to the problem of user trust in opaque computational models, yet does little to give trust diagnostic or even conceptual criteria. I propose that contextual trust is a natural fit for the task by illustrating that model transparency and explainability map nicely into our construction of the contexts $C$.
Automated Interactive Domain-Specific Conversational Agents that Understand Human Dialogs
Venue: arXiv cs.AI 2023
Year: 2023

Achieving human-like communication with machines remains a classic, challenging topic in the field of Knowledge Representation and Reasoning and Natural Language Processing. These Large Language Models (LLMs) rely on pattern-matching rather than a true understanding of the semantic meaning of a sentence. As a result, they may generate incorrect responses. To generate an assuredly correct response, one has to "understand" the semantics of a sentence. To achieve this "understanding", logic-based (commonsense) reasoning methods such as Answer Set Programming (ASP) are arguably needed. In this paper, we describe the AutoConcierge system that leverages LLMs and ASP to develop a conversational agent that can truly "understand" human dialogs in restricted domains. AutoConcierge is focused on a specific domain-advising users about restaurants in their local area based on their preferences. AutoConcierge will interactively understand a user's utterances, identify the missing information in them, and request the user via a natural language sentence to provide it. Once AutoConcierge has determined that all the information has been received, it computes a restaurant recommendation based on the user-preferences it has acquired from the human user. AutoConcierge is based on our STAR framework developed earlier, which uses GPT-3 to convert human dialogs into predicates that capture the deep structure of the dialog's sentence. These predicates are then input into the goal-directed s(CASP) ASP system for performing commonsense reasoning. To the best of our knowledge, AutoConcierge is the first automated conversational agent that can realistically converse like a human and provide help to humans based on truly understanding human utterances.
Large-scale End-of-Life Prediction of Hard Disks in Distributed Datacenters
Venue: arXiv cs.LG 2023
Year: 2023

On a daily basis, data centers process huge volumes of data backed by the proliferation of inexpensive hard disks. Data stored in these disks serve a range of critical functional needs from financial, and healthcare to aerospace. As such, premature disk failure and consequent loss of data can be catastrophic. To mitigate the risk of failures, cloud storage providers perform condition-based monitoring and replace hard disks before they fail. By estimating the remaining useful life of hard disk drives, one can predict the time-to-failure of a particular device and replace it at the right time, ensuring maximum utilization whilst reducing operational costs. In this work, large-scale predictive analyses are performed using severely skewed health statistics data by incorporating customized feature engineering and a suite of sequence learners. Past work suggests using LSTMs as an excellent approach to predicting remaining useful life. To this end, we present an encoder-decoder LSTM model where the context gained from understanding health statistics sequences aid in predicting an output sequence of the number of days remaining before a disk potentially fails. The models developed in this work are trained and tested across an exhaustive set of all of the 10 years of S.M.A.R.T. health data in circulation from Backblaze and on a wide variety of disk instances. It closes the knowledge gap on what full-scale training achieves on thousands of devices and advances the state-of-the-art by providing tangible metrics for evaluation and generalization for practitioners looking to extend their workflow to all years of health data in circulation across disk manufacturers. The encoder-decoder LSTM posted an RMSE of 0.83 during training and 0.86 during testing over the exhaustive 10 year data while being able to generalize competitively over other drives from the Seagate family.
RL meets Multi-Link Operation in IEEE 802.11be: Multi-Headed Recurrent Soft-Actor Critic-based Traffic Allocation
Venue: arXiv cs.NI 2023
Year: 2023

IEEE 802.11be -Extremely High Throughput-, commercially known as Wireless-Fidelity (Wi-Fi) 7 is the newest IEEE 802.11 amendment that comes to address the increasingly throughput hungry services such as Ultra High Definition (4K/8K) Video and Virtual/Augmented Reality (VR/AR). To do so, IEEE 802.11be presents a set of novel features that will boost the Wi-Fi technology to its edge. Among them, Multi-Link Operation (MLO) devices are anticipated to become a reality, leaving Single-Link Operation (SLO) Wi-Fi in the past. To achieve superior throughput and very low latency, a careful design approach must be taken, on how the incoming traffic is distributed in MLO capable devices. In this paper, we present a Reinforcement Learning (RL) algorithm named Multi-Headed Recurrent Soft-Actor Critic (MH-RSAC) to distribute incoming traffic in 802.11be MLO capable networks. Moreover, we compare our results with two non-RL baselines previously proposed in the literature named: Single Link Less Congested Interface (SLCI) and Multi-Link Congestion-aware Load balancing at flow arrivals (MCAA). Simulation results reveal that the MH-RSAC algorithm is able to obtain gains in terms of Throughput Drop Ratio (TDR) up to 35.2% and 6% when compared with the SLCI and MCAA algorithms, respectively. Finally, we observed that our scheme is able to respond more efficiently to high throughput and dynamic traffic such as VR and Web Browsing (WB) when compared with the baselines. Results showed an improvement of the MH-RSAC scheme in terms of Flow Satisfaction (FS) of up to 25.6% and 6% over the the SCLI and MCAA algorithms.
Cryptographic Primitives based on Compact Knapsack Problem
Venue: arXiv cs.CR 2023
Year: 2023

In the present paper, we extend previous results of an id scheme based on compact knapsack problem defined by one equation. We present a sound three-move id scheme based on compact knapsack problem defined by an integer matrix. We study this problem by providing attacks based on lattices. Furthermore, we provide the corresponding digital signature obtained by Fiat-Shamir transform and we prove that is secure under ROM. These primitives are post quantum resistant.
Optimal Energy Management of Plug-in Hybrid Vehicles Through Exploration-to-Exploitation Ratio Control in Ensemble Reinforcement Learning
Venue: arXiv cs.RO 2023
Year: 2023

Developing intelligent energy management systems with high adaptability and superiority is necessary and significant for Hybrid Electric Vehicles (HEVs). This paper proposed an ensemble learning-based scheme based on a learning automata module (LAM) to enhance vehicle energy efficiency. Two parallel base learners following two exploration-to-exploitation ratios (E2E) methods are used to generate an optimal solution, and the final action is jointly determined by the LAM using three ensemble methods. 'Reciprocal function-based decay' (RBD) and 'Step-based decay' (SBD) are proposed respectively to generate E2E ratio trajectories based on conventional Exponential decay (EXD) functions of reinforcement learning. Furthermore, considering the different performances of three decay functions, an optimal combination with the RBD, SBD, and EXD is employed to determine the ultimate action. Experiments are carried out in software-in-loop (SiL) and hardware-in-the-loop (HiL) to validate the potential performance of energy-saving under four predefined cycles. The SiL test demonstrates that the ensemble learning system with an optimal combination can achieve 1.09$\%$ higher vehicle energy efficiency than a single Q-learning strategy with the EXD function. In the HiL test, the ensemble learning system with an optimal combination can save more than 1.04$\%$ in the predefined real-world driving condition than the single Q-learning scheme based on the EXD function.
Machine Learning for Flow Cytometry Data Analysis
Venue: arXiv cs.LG 2023
Year: 2023

Flow cytometry mainly used for detecting the characteristics of a number of biochemical substances based on the expression of specific markers in cells. It is particularly useful for detecting membrane surface receptors, antigens, ions, or during DNA/RNA expression. Not only can it be employed as a biomedical research tool for recognising distinctive types of cells in mixed populations, but it can also be used as a diagnostic tool for classifying abnormal cell populations connected with disease. Modern flow cytometers can rapidly analyse tens of thousands of cells at the same time while also measuring multiple parameters from a single cell. However, the rapid development of flow cytometers makes it challenging for conventional analysis methods to interpret flow cytometry data. Researchers need to be able to distinguish interesting-looking cell populations manually in multi-dimensional data collected from millions of cells. Thus, it is essential to find a robust approach for analysing flow cytometry data automatically, specifically in identifying cell populations automatically. This thesis mainly concerns discover the potential shortcoming of current automated-gating algorithms in both real datasets and synthetic datasets. Three representative automated clustering algorithms are selected to be applied, compared and evaluated by completely and partially automated gating. A subspace clustering ProClus also implemented in this thesis. The performance of ProClus in flow cytometry is not well, but it is still a useful algorithm to detect noise.
ART: Automatic multi-step reasoning and tool-use for large language models
Venue: arXiv cs.CL 2023
Year: 2023

Large language models (LLMs) can perform complex reasoning in few- and zero-shot settings by generating intermediate chain of thought (CoT) reasoning steps. Further, each reasoning step can rely on external tools to support computation beyond the core LLM capabilities (e.g. search/running code). Prior work on CoT prompting and tool use typically requires hand-crafting task-specific demonstrations and carefully scripted interleaving of model generations with tool use. We introduce Automatic Reasoning and Tool-use (ART), a framework that uses frozen LLMs to automatically generate intermediate reasoning steps as a program. Given a new task to solve, ART selects demonstrations of multi-step reasoning and tool use from a task library. At test time, ART seamlessly pauses generation whenever external tools are called, and integrates their output before resuming generation. ART achieves a substantial improvement over few-shot prompting and automatic CoT on unseen tasks in the BigBench and MMLU benchmarks, and matches performance of hand-crafted CoT prompts on a majority of these tasks. ART is also extensible, and makes it easy for humans to improve performance by correcting errors in task-specific programs or incorporating new tools, which we demonstrate by drastically improving performance on select tasks with minimal human intervention.
Improving Perceptual Quality, Intelligibility, and Acoustics on VoIP Platforms
Venue: arXiv cs.SD 2023
Year: 2023

In this paper, we present a method for fine-tuning models trained on the Deep Noise Suppression (DNS) 2020 Challenge to improve their performance on Voice over Internet Protocol (VoIP) applications. Our approach involves adapting the DNS 2020 models to the specific acoustic characteristics of VoIP communications, which includes distortion and artifacts caused by compression, transmission, and platform-specific processing. To this end, we propose a multi-task learning framework for VoIP-DNS that jointly optimizes noise suppression and VoIP-specific acoustics for speech enhancement. We evaluate our approach on a diverse VoIP scenarios and show that it outperforms both industry performance and state-of-the-art methods for speech enhancement on VoIP applications. Our results demonstrate the potential of models trained on DNS-2020 to be improved and tailored to different VoIP platforms using VoIP-DNS, whose findings have important applications in areas such as speech recognition, voice assistants, and telecommunication.
Plant Disease Detection using Region-Based Convolutional Neural Network
Venue: arXiv cs.CV 2023
Year: 2023

Agriculture plays an important role in the food and economy of Bangladesh. The rapid growth of population over the years also has increased the demand for food production. One of the major reasons behind low crop production is numerous bacteria, virus and fungal plant diseases. Early detection of plant diseases and proper usage of pesticides and fertilizers are vital for preventing the diseases and boost the yield. Most of the farmers use generalized pesticides and fertilizers in the entire fields without specifically knowing the condition of the plants. Thus the production cost oftentimes increases, and, not only that, sometimes this becomes detrimental to the yield. Deep Learning models are found to be very effective to automatically detect plant diseases from images of plants, thereby reducing the need for human specialists. This paper aims at building a lightweight deep learning model for predicting leaf disease in tomato plants. By modifying the region-based convolutional neural network, we design an efficient and effective model that demonstrates satisfactory empirical performance on a benchmark dataset. Our proposed model can easily be deployed in a larger system where drones take images of leaves and these images will be fed into our model to know the health condition.
LCS-TF: Multi-Agent Deep Reinforcement Learning-Based Intelligent Lane-Change System for Improving Traffic Flow
Venue: arXiv cs.CY 2023
Year: 2023

Discretionary lane-change is one of the critical challenges for autonomous vehicle (AV) design due to its significant impact on traffic efficiency. Existing intelligent lane-change solutions have primarily focused on optimizing the performance of the ego-vehicle, thereby suffering from limited generalization performance. Recent research has seen an increased interest in multi-agent reinforcement learning (MARL)-based approaches to address the limitation of the ego vehicle-based solutions through close coordination of multiple agents. Although MARL-based approaches have shown promising results, the potential impact of lane-change decisions on the overall traffic flow of a road segment has not been fully considered. In this paper, we present a novel hybrid MARL-based intelligent lane-change system for AVs designed to jointly optimize the local performance for the ego vehicle, along with the global performance focused on the overall traffic flow of a given road segment. With a careful review of the relevant transportation literature, a novel state space is designed to integrate both the critical local traffic information pertaining to the surrounding vehicles of the ego vehicle, as well as the global traffic information obtained from a road-side unit (RSU) responsible for managing a road segment. We create a reward function to ensure that the agents make effective lane-change decisions by considering the performance of the ego vehicle and the overall improvement of traffic flow. A multi-agent deep Q-network (DQN) algorithm is designed to determine the optimal policy for each agent to effectively cooperate in performing lane-change maneuvers. LCS-TF's performance was evaluated through extensive simulations in comparison with state-of-the-art MARL models. In all aspects of traffic efficiency, driving safety, and driver comfort, the results indicate that LCS-TF exhibits superior performance.