OpenRaiser/Intern-Atlas huggingface dataset:
Multiscale Neuroimaging Features for the Identification of Medication Class and Non-Responders in Mood Disorder Treatment
Venue: arXiv cs.LG 2024
Year: 2024

In the clinical treatment of mood disorders, the complex behavioral symptoms presented by patients and variability of patient response to particular medication classes can create difficulties in providing fast and reliable treatment when standard diagnostic and prescription methods are used. Increasingly, the incorporation of physiological information such as neuroimaging scans and derivatives into the clinical process promises to alleviate some of the uncertainty surrounding this process. Particularly, if neural features can help to identify patients who may not respond to standard courses of anti-depressants or mood stabilizers, clinicians may elect to avoid lengthy and side-effect-laden treatments and seek out a different, more effective course that might otherwise not have been under consideration. Previously, approaches for the derivation of relevant neuroimaging features work at only one scale in the data, potentially limiting the depth of information available for clinical decision support. In this work, we show that the utilization of multi spatial scale neuroimaging features - particularly resting state functional networks and functional network connectivity measures - provide a rich and robust basis for the identification of relevant medication class and non-responders in the treatment of mood disorders. We demonstrate that the generated features, along with a novel approach for fast and automated feature selection, can support high accuracy rates in the identification of medication class and non-responders as well as the identification of novel, multi-scale biomarkers.
Using Graph Theory for Improving Machine Learning-based Detection of Cyber Attacks
Venue: arXiv cs.CR 2024
Year: 2024

Early detection of network intrusions and cyber threats is one of the main pillars of cybersecurity. One of the most effective approaches for this purpose is to analyze network traffic with the help of artificial intelligence algorithms, with the aim of detecting the possible presence of an attacker by distinguishing it from a legitimate user. This is commonly done by collecting the traffic exchanged between terminals in a network and analyzing it on a per-packet or per-connection basis. In this paper, we propose instead to perform pre-processing of network traffic under analysis with the aim of extracting some new metrics on which we can perform more efficient detection and overcome some limitations of classical approaches. These new metrics are based on graph theory, and consider the network as a whole, rather than focusing on individual packets or connections. Our approach is validated through experiments performed on publicly available data sets, from which it results that it can not only overcome some of the limitations of classical approaches, but also achieve a better detection capability of cyber threats.
MODIPHY: Multimodal Obscured Detection for IoT using PHantom Convolution-Enabled Faster YOLO
Venue: arXiv cs.CV 2024
Year: 2024

Low-light conditions and occluded scenarios impede object detection in real-world Internet of Things (IoT) applications like autonomous vehicles and security systems. While advanced machine learning models strive for accuracy, their computational demands clash with the limitations of resource-constrained devices, hampering real-time performance. In our current research, we tackle this challenge, by introducing ``YOLO Phantom", one of the smallest YOLO models ever conceived. YOLO Phantom utilizes the novel Phantom Convolution block, achieving comparable accuracy to the latest YOLOv8n model while simultaneously reducing both parameters and model size by 43\%, resulting in a significant 19\% reduction in Giga Floating-Point Operations (GFLOPs). YOLO Phantom leverages transfer learning on our multimodal RGB-infrared dataset to address low-light and occlusion issues, equipping it with robust vision under adverse conditions. Its real-world efficacy is demonstrated on an IoT platform with advanced low-light and RGB cameras, seamlessly connecting to an AWS-based notification endpoint for efficient real-time object detection. Benchmarks reveal a substantial boost of 17\% and 14\% in frames per second (FPS) for thermal and RGB detection, respectively, compared to the baseline YOLOv8n model. For community contribution, both the code and the multimodal dataset are available on GitHub.
Experimental Interface for Multimodal and Large Language Model Based Explanations of Educational Recommender Systems
Venue: arXiv cs.HC 2024
Year: 2024

In the age of artificial intelligence (AI), providing learners with suitable and sufficient explanations of AI-based recommendation algorithm's output becomes essential to enable them to make an informed decision about it. However, the rapid development of AI approaches for educational recommendations and their explainability is not accompanied by an equal level of evidence-based experimentation to evaluate the learning effect of those explanations. To address this issue, we propose an experimental web-based tool for evaluating multimodal and large language model (LLM) based explainability approaches. Our tool provides a comprehensive set of modular, interactive, and customizable explainability elements, which researchers and educators can utilize to study the role of individual and hybrid explainability methods. We design a two-stage evaluation of the proposed tool, with learners and with educators. Our preliminary results from the first stage show high acceptance of the tool's components, user-friendliness, and an induced motivation to use the explanations for exploring more information about the recommendation.
QACP: An Annotated Question Answering Dataset for Assisting Chinese Python Programming Learners
Venue: arXiv cs.CL 2024
Year: 2024

In online learning platforms, particularly in rapidly growing computer programming courses, addressing the thousands of students' learning queries requires considerable human cost. The creation of intelligent assistant large language models (LLMs) tailored for programming education necessitates distinct data support. However, in real application scenarios, the data resources for training such LLMs are relatively scarce. Therefore, to address the data scarcity in intelligent educational systems for programming, this paper proposes a new Chinese question-and-answer dataset for Python learners. To ensure the authenticity and reliability of the sources of the questions, we collected questions from actual student questions and categorized them according to various dimensions such as the type of questions and the type of learners. This annotation principle is designed to enhance the effectiveness and quality of online programming education, providing a solid data foundation for developing the programming teaching assists (TA). Furthermore, we conducted comprehensive evaluations of various LLMs proficient in processing and generating Chinese content, highlighting the potential limitations of general LLMs as intelligent teaching assistants in computer programming courses.
Large Language User Interfaces: Voice Interactive User Interfaces powered by LLMs
Venue: arXiv cs.HC 2024
Year: 2024

The evolution of Large Language Models (LLMs) has showcased remarkable capacities for logical reasoning and natural language comprehension. These capabilities can be leveraged in solutions that semantically and textually model complex problems. In this paper, we present our efforts toward constructing a framework that can serve as an intermediary between a user and their user interface (UI), enabling dynamic and real-time interactions. We employ a system that stands upon textual semantic mappings of UI components, in the form of annotations. These mappings are stored, parsed, and scaled in a custom data structure, supplementary to an agent-based prompting backend engine. Employing textual semantic mappings allows each component to not only explain its role to the engine but also provide expectations. By comprehending the needs of both the user and the components, our LLM engine can classify the most appropriate application, extract relevant parameters, and subsequently execute precise predictions of the user's expected actions. Such an integration evolves static user interfaces into highly dynamic and adaptable solutions, introducing a new frontier of intelligent and responsive user experiences.
LLMs Among Us: Generative AI Participating in Digital Discourse
Venue: arXiv cs.HC 2024
Year: 2024

The emergence of Large Language Models (LLMs) has great potential to reshape the landscape of many social media platforms. While this can bring promising opportunities, it also raises many threats, such as biases and privacy concerns, and may contribute to the spread of propaganda by malicious actors. We developed the "LLMs Among Us" experimental framework on top of the Mastodon social media platform for bot and human participants to communicate without knowing the ratio or nature of bot and human participants. We built 10 personas with three different LLMs, GPT-4, LLama 2 Chat, and Claude. We conducted three rounds of the experiment and surveyed participants after each round to measure the ability of LLMs to pose as human participants without human detection. We found that participants correctly identified the nature of other users in the experiment only 42% of the time despite knowing the presence of both bots and humans. We also found that the choice of persona had substantially more impact on human perception than the choice of mainstream LLMs.
Educational data mining and learning analytics: An updated survey
Venue: arXiv cs.HC 2024
Year: 2024

This survey is an updated and improved version of the previous one published in 2013 in this journal with the title data mining in education. It reviews in a comprehensible and very general way how Educational Data Mining and Learning Analytics have been applied over educational data. In the last decade, this research area has evolved enormously and a wide range of related terms are now used in the bibliography such as Academic Analytics, Institutional Analytics, Teaching Analytics, Data-Driven Education, Data-Driven Decision-Making in Education, Big Data in Education, and Educational Data Science. This paper provides the current state of the art by reviewing the main publications, the key milestones, the knowledge discovery cycle, the main educational environments, the specific tools, the free available datasets, the most used methods, the main objectives, and the future trends in this research area.
Extending 3D body pose estimation for robotic-assistive therapies of autistic children
Venue: arXiv cs.RO 2024
Year: 2024

Robotic-assistive therapy has demonstrated very encouraging results for children with Autism. Accurate estimation of the child's pose is essential both for human-robot interaction and for therapy assessment purposes. Non-intrusive methods are the sole viable option since these children are sensitive to touch. While depth cameras have been used extensively, existing methods face two major limitations: (i) they are usually trained with adult-only data and do not correctly estimate a child's pose, and (ii) they fail in scenarios with a high number of occlusions. Therefore, our goal was to develop a 3D pose estimator for children, by adapting an existing state-of-the-art 3D body modelling method and incorporating a linear regression model to fine-tune one of its inputs, thereby correcting the pose of children's 3D meshes. In controlled settings, our method has an error below $0.3m$, which is considered acceptable for this kind of application and lower than current state-of-the-art methods. In real-world settings, the proposed model performs similarly to a Kinect depth camera and manages to successfully estimate the 3D body poses in a much higher number of frames.
UGMAE: A Unified Framework for Graph Masked Autoencoders
Venue: arXiv cs.LG 2024
Year: 2024

Generative self-supervised learning on graphs, particularly graph masked autoencoders, has emerged as a popular learning paradigm and demonstrated its efficacy in handling non-Euclidean data. However, several remaining issues limit the capability of existing methods: 1) the disregard of uneven node significance in masking, 2) the underutilization of holistic graph information, 3) the ignorance of semantic knowledge in the representation space due to the exclusive use of reconstruction loss in the output space, and 4) the unstable reconstructions caused by the large volume of masked contents. In light of this, we propose UGMAE, a unified framework for graph masked autoencoders to address these issues from the perspectives of adaptivity, integrity, complementarity, and consistency. Specifically, we first develop an adaptive feature mask generator to account for the unique significance of nodes and sample informative masks (adaptivity). We then design a ranking-based structure reconstruction objective joint with feature reconstruction to capture holistic graph information and emphasize the topological proximity between neighbors (integrity). After that, we present a bootstrapping-based similarity module to encode the high-level semantic knowledge in the representation space, complementary to the low-level reconstruction in the output space (complementarity). Finally, we build a consistency assurance module to provide reconstruction objectives with extra stabilized consistency targets (consistency). Extensive experiments demonstrate that UGMAE outperforms both contrastive and generative state-of-the-art baselines on several tasks across multiple datasets.
Beyond the Mud: Datasets and Benchmarks for Computer Vision in Off-Road Racing
Venue: arXiv cs.CV 2024
Year: 2024

Despite significant progress in optical character recognition (OCR) and computer vision systems, robustly recognizing text and identifying people in images taken in unconstrained \emph{in-the-wild} environments remain an ongoing challenge. However, such obstacles must be overcome in practical applications of vision systems, such as identifying racers in photos taken during off-road racing events. To this end, we introduce two new challenging real-world datasets - the off-road motorcycle Racer Number Dataset (RND) and the Muddy Racer re-iDentification Dataset (MUDD) - to highlight the shortcomings of current methods and drive advances in OCR and person re-identification (ReID) under extreme conditions. These two datasets feature over 6,300 images taken during off-road competitions which exhibit a variety of factors that undermine even modern vision systems, namely mud, complex poses, and motion blur. We establish benchmark performance on both datasets using state-of-the-art models. Off-the-shelf models transfer poorly, reaching only 15% end-to-end (E2E) F1 score on text spotting, and 33% rank-1 accuracy on ReID. Fine-tuning yields major improvements, bringing model performance to 53% F1 score for E2E text spotting and 79% rank-1 accuracy on ReID, but still falls short of good performance. Our analysis exposes open problems in real-world OCR and ReID that necessitate domain-targeted techniques. With these datasets and analysis of model limitations, we aim to foster innovations in handling real-world conditions like mud and complex poses to drive progress in robust computer vision. All data was sourced from PerformancePhoto.co, a website used by professional motorsports photographers, racers, and fans. The top-performing text spotting and ReID models are deployed on this platform to power real-time race photo search.
Portobello: Extending Driving Simulation from the Lab to the Road
Venue: arXiv cs.HC 2024
Year: 2024

In automotive user interface design, testing often starts with lab-based driving simulators and migrates toward on-road studies to mitigate risks. Mixed reality (XR) helps translate virtual study designs to the real road to increase ecological validity. However, researchers rarely run the same study in both in-lab and on-road simulators due to the challenges of replicating studies in both physical and virtual worlds. To provide a common infrastructure to port in-lab study designs on-road, we built a platform-portable infrastructure, Portobello, to enable us to run twinned physical-virtual studies. As a proof-of-concept, we extended the on-road simulator XR-OOM with Portobello. We ran a within-subjects, autonomous-vehicle crosswalk cooperation study (N=32) both in-lab and on-road to investigate study design portability and platform-driven influences on study outcomes. To our knowledge, this is the first system that enables the twinning of studies originally designed for in-lab simulators to be carried out in an on-road platform.
ReNeLiB: Real-time Neural Listening Behavior Generation for Socially Interactive Agents
Venue: arXiv cs.HC 2024
Year: 2024

Flexible and natural nonverbal reactions to human behavior remain a challenge for socially interactive agents (SIAs) that are predominantly animated using hand-crafted rules. While recently proposed machine learning based approaches to conversational behavior generation are a promising way to address this challenge, they have not yet been employed in SIAs. The primary reason for this is the lack of a software toolkit integrating such approaches with SIA frameworks that conforms to the challenging real-time requirements of human-agent interaction scenarios. In our work, we for the first time present such a toolkit consisting of three main components: (1) real-time feature extraction capturing multi-modal social cues from the user; (2) behavior generation based on a recent state-of-the-art neural network approach; (3) visualization of the generated behavior supporting both FLAME-based and Apple ARKit-based interactive agents. We comprehensively evaluate the real-time performance of the whole framework and its components. In addition, we introduce pre-trained behavioral generation models derived from psychotherapy sessions for domain-specific listening behaviors. Our software toolkit, pivotal for deploying and assessing SIAs' listening behavior in real-time, is publicly available. Resources, including code, behavioural multi-modal features extracted from therapeutic interactions, are hosted at https://daksitha.github.io/ReNeLib
Investigating the Impact of Data Contamination of Large Language Models in Text-to-SQL Translation
Venue: arXiv cs.CL 2024
Year: 2024

Understanding textual description to generate code seems to be an achieved capability of instruction-following Large Language Models (LLMs) in zero-shot scenario. However, there is a severe possibility that this translation ability may be influenced by having seen target textual descriptions and the related code. This effect is known as Data Contamination. In this study, we investigate the impact of Data Contamination on the performance of GPT-3.5 in the Text-to-SQL code-generating tasks. Hence, we introduce a novel method to detect Data Contamination in GPTs and examine GPT-3.5's Text-to-SQL performances using the known Spider Dataset and our new unfamiliar dataset Termite. Furthermore, we analyze GPT-3.5's efficacy on databases with modified information via an adversarial table disconnection (ATD) approach, complicating Text-to-SQL tasks by removing structural pieces of information from the database. Our results indicate a significant performance drop in GPT-3.5 on the unfamiliar Termite dataset, even with ATD modifications, highlighting the effect of Data Contamination on LLMs in Text-to-SQL translation tasks.
Addressing cognitive bias in medical language models
Venue: arXiv cs.CL 2024
Year: 2024

There is increasing interest in the application large language models (LLMs) to the medical field, in part because of their impressive performance on medical exam questions. While promising, exam questions do not reflect the complexity of real patient-doctor interactions. In reality, physicians' decisions are shaped by many complex factors, such as patient compliance, personal experience, ethical beliefs, and cognitive bias. Taking a step toward understanding this, our hypothesis posits that when LLMs are confronted with clinical questions containing cognitive biases, they will yield significantly less accurate responses compared to the same questions presented without such biases. In this study, we developed BiasMedQA, a benchmark for evaluating cognitive biases in LLMs applied to medical tasks. Using BiasMedQA we evaluated six LLMs, namely GPT-4, Mixtral-8x70B, GPT-3.5, PaLM-2, Llama 2 70B-chat, and the medically specialized PMC Llama 13B. We tested these models on 1,273 questions from the US Medical Licensing Exam (USMLE) Steps 1, 2, and 3, modified to replicate common clinically-relevant cognitive biases. Our analysis revealed varying effects for biases on these LLMs, with GPT-4 standing out for its resilience to bias, in contrast to Llama 2 70B-chat and PMC Llama 13B, which were disproportionately affected by cognitive bias. Our findings highlight the critical need for bias mitigation in the development of medical LLMs, pointing towards safer and more reliable applications in healthcare.
A Universal Non-Parametric Approach For Improved Molecular Sequence Analysis
Venue: arXiv cs.LG 2024
Year: 2024

In the field of biological research, it is essential to comprehend the characteristics and functions of molecular sequences. The classification of molecular sequences has seen widespread use of neural network-based techniques. Despite their astounding accuracy, these models often require a substantial number of parameters and more data collection. In this work, we present a novel approach based on the compression-based Model, motivated from \cite{jiang2023low}, which combines the simplicity of basic compression algorithms like Gzip and Bz2, with Normalized Compression Distance (NCD) algorithm to achieve better performance on classification tasks without relying on handcrafted features or pre-trained models. Firstly, we compress the molecular sequence using well-known compression algorithms, such as Gzip and Bz2. By leveraging the latent structure encoded in compressed files, we compute the Normalized Compression Distance between each pair of molecular sequences, which is derived from the Kolmogorov complexity. This gives us a distance matrix, which is the input for generating a kernel matrix using a Gaussian kernel. Next, we employ kernel Principal Component Analysis (PCA) to get the vector representations for the corresponding molecular sequence, capturing important structural and functional information. The resulting vector representations provide an efficient yet effective solution for molecular sequence analysis and can be used in ML-based downstream tasks. The proposed approach eliminates the need for computationally intensive Deep Neural Networks (DNNs), with their large parameter counts and data requirements. Instead, it leverages a lightweight and universally accessible compression-based model.