OpenRaiser/Intern-Atlas huggingface dataset:
AraOS: Analyzing the Impact of Virtual Memory Management on Vector Unit Performance
Venue: arXiv cs.AR 2025
Year: 2025

Vector processor architectures offer an efficient solution for accelerating data-parallel workloads (e.g., ML, AI), reducing instruction count, and enhancing processing efficiency. This is evidenced by the increasing adoption of vector ISAs, such as Arm's SVE/SVE2 and RISC-V's RVV, not only in high-performance computers but also in embedded systems. The open-source nature of RVV has particularly encouraged the development of numerous vector processor designs across industry and academia. However, despite the growing number of open-source RVV processors, there is a lack of published data on their performance in a complex application environment hosted by a full-fledged operating system (Linux). In this work, we add OS support to the open-source bare-metal Ara2 vector processor (AraOS) by sharing the MMU of CVA6, the scalar core used for instruction dispatch to Ara2, and integrate AraOS into the open-source Cheshire SoC platform. We evaluate the performance overhead of virtual-to-physical address translation by benchmarking matrix multiplication kernels across several problem sizes and translation lookaside buffer (TLB) configurations in CVA6's shared MMU, providing insights into vector performance in a full-system environment with virtual memory. With at least 16 TLB entries, the virtual memory overhead remains below 3.5%. Finally, we benchmark a 2-lane AraOS instance with the open-source RiVEC benchmark suite for RVV architectures, with peak average speedups of 3.2x against scalar-only execution.
Multimodal Representation Learning Techniques for Comprehensive Facial State Analysis
Venue: arXiv cs.CV 2025
Year: 2025

Multimodal foundation models have significantly improved feature representation by integrating information from multiple modalities, making them highly suitable for a broader set of applications. However, the exploration of multimodal facial representation for understanding perception has been limited. Understanding and analyzing facial states, such as Action Units (AUs) and emotions, require a comprehensive and robust framework that bridges visual and linguistic modalities. In this paper, we present a comprehensive pipeline for multimodal facial state analysis. First, we compile a new Multimodal Face Dataset (MFA) by generating detailed multilevel language descriptions of face, incorporating Action Unit (AU) and emotion descriptions, by leveraging GPT-4o. Second, we introduce a novel Multilevel Multimodal Face Foundation model (MF^2) tailored for Action Unit (AU) and emotion recognition. Our model incorporates comprehensive visual feature modeling at both local and global levels of face image, enhancing its ability to represent detailed facial appearances. This design aligns visual representations with structured AU and emotion descriptions, ensuring effective cross-modal integration. Third, we develop a Decoupled Fine-Tuning Network (DFN) that efficiently adapts MF^2 across various tasks and datasets. This approach not only reduces computational overhead but also broadens the applicability of the foundation model to diverse scenarios. Experimentation show superior performance for AU and emotion detection tasks.
Brain-Machine Interfaces & Information Retrieval Challenges and Opportunities
Venue: arXiv cs.IR 2025
Year: 2025

The fundamental goal of Information Retrieval (IR) systems lies in their capacity to effectively satisfy human information needs - a challenge that encompasses not just the technical delivery of information, but the nuanced understanding of human cognition during information seeking. Contemporary IR platforms rely primarily on observable interaction signals, creating a fundamental gap between system capabilities and users' cognitive processes. Brain-Machine Interface (BMI) technologies now offer unprecedented potential to bridge this gap through direct measurement of previously inaccessible aspects of information-seeking behaviour. This perspective paper offers a broad examination of the IR landscape, providing a comprehensive analysis of how BMI technology could transform IR systems, drawing from advances at the intersection of both neuroscience and IR research. We present our analysis through three identified fundamental vertices: (1) understanding the neural correlates of core IR concepts to advance theoretical models of search behaviour, (2) enhancing existing IR systems through contextual integration of neurophysiological signals, and (3) developing proactive IR capabilities through direct neurophysiological measurement. For each vertex, we identify specific research opportunities and propose concrete directions for developing BMI-enhanced IR systems. We conclude by examining critical technical and ethical challenges in implementing these advances, providing a structured roadmap for future research at the intersection of neuroscience and IR.
Can LLMs Assist Expert Elicitation for Probabilistic Causal Modeling?
Venue: arXiv cs.AI 2025
Year: 2025

Objective: This study investigates the potential of Large Language Models (LLMs) as an alternative to human expert elicitation for extracting structured causal knowledge and facilitating causal modeling in biometric and healthcare applications. Material and Methods: LLM-generated causal structures, specifically Bayesian networks (BNs), were benchmarked against traditional statistical methods (e.g., Bayesian Information Criterion) using healthcare datasets. Validation techniques included structural equation modeling (SEM) to verifying relationships, and measures such as entropy, predictive accuracy, and robustness to compare network structures. Results and Discussion: LLM-generated BNs demonstrated lower entropy than expert-elicited and statistically generated BNs, suggesting higher confidence and precision in predictions. However, limitations such as contextual constraints, hallucinated dependencies, and potential biases inherited from training data require further investigation. Conclusion: LLMs represent a novel frontier in expert elicitation for probabilistic causal modeling, promising to improve transparency and reduce uncertainty in the decision-making using such models.
Unique Decoding of Reed-Solomon and Related Codes for Semi-Adversarial Errors
Venue: arXiv cs.IT 2025
Year: 2025

For over a quarter century, the Guruswami--Sudan algorithm has served as the state-of-the-art for list-decoding Reed--Solomon (RS) codes up to the Johnson bound against adversarial errors. However, some recent structural results on the combinatorial list decoding of randomly punctured Reed--Solomon codes suggest that Johnson bound can likely be broken for some subclasses of RS codes. Motivated by these results, we seek to make traction on understanding adversarial decoding by considering a new model: semi-adversarial errors. This error model bridges between fully random errors and fully adversarial errors by allowing some symbols of a message to be corrupted by an adversary while others are replaced with uniformly random symbols. As our main quest, we seek to understand optimal efficient unique decoding algorithms in the semi-adversarial model. In particular, we revisit some classical results on decoding interleaved Reed--Solomon codes (aka subfield evaluation RS codes) in the random error model by Bleichenbacher--Kiayias--Yung (BKY) and work to improve and extend their analysis. First, we give an improved implementation and analysis of the BKY algorithm for interleaved Reed--Solomon codes in the semi-adversarial model. In particular, our algorithm runs in near-linear time, and for most mixtures of random and adversarial errors, our analysis matches the information-theoretic optimum. Moreover, inspired by the BKY algorithm, we use a novel interpolation to extend our approach to the settings of folded Reed--Solomon and multiplicity codes, resulting in fast algorithms for unique decoding against semi-adversarial errors. A particular advantage of our near-linear time algorithm over state-of-the-art decoding algorithms for adversarial errors is that its running time depends only on a polynomial function of the folding parameter rather than on an exponential function.
CliniChat: A Multi-Source Knowledge-Driven Framework for Clinical Interview Dialogue Reconstruction and Evaluation
Venue: arXiv cs.CL 2025
Year: 2025

Large language models (LLMs) hold great promise for assisting clinical interviews due to their fluent interactive capabilities and extensive medical knowledge. However, the lack of high-quality interview dialogue data and widely accepted evaluation methods has significantly impeded this process. So we propose CliniChat, a framework that integrates multi-source knowledge to enable LLMs to simulate real-world clinical interviews. It consists of two modules: Clini-Recon and Clini-Eval, each responsible for reconstructing and evaluating interview dialogues, respectively. By incorporating three sources of knowledge, Clini-Recon transforms clinical notes into systematic, professional, and empathetic interview dialogues. Clini-Eval combines a comprehensive evaluation metric system with a two-phase automatic evaluation approach, enabling LLMs to assess interview performance like experts. We contribute MedQA-Dialog, a high-quality synthetic interview dialogue dataset, and CliniChatGLM, a model specialized for clinical interviews. Experimental results demonstrate that CliniChatGLM's interview capabilities undergo a comprehensive upgrade, particularly in history-taking, achieving state-of-the-art performance.
Foundation models for electronic health records: representation dynamics and transferability
Venue: arXiv cs.LG 2025
Year: 2025

Foundation models (FMs) trained on electronic health records (EHRs) have shown strong performance on a range of clinical prediction tasks. However, adapting these models to local health systems remains challenging due to limited data availability and resource constraints. In this study, we investigated what these models learn and evaluated the transferability of an FM trained on MIMIC-IV to an institutional EHR dataset at the University of Chicago Medical Center. We assessed their ability to identify outlier patients and examined representation-space patient trajectories in relation to future clinical outcomes. We also evaluated the performance of supervised fine-tuned classifiers on both source and target datasets. Our findings offer insights into the adaptability of FMs across different healthcare systems, highlight considerations for their effective implementation, and provide an empirical analysis of the underlying factors that contribute to their predictive performance.
Integrating Vision and Location with Transformers: A Multimodal Deep Learning Framework for Medical Wound Analysis
Venue: arXiv cs.CV 2025
Year: 2025

Effective recognition of acute and difficult-to-heal wounds is a necessary step in wound diagnosis. An efficient classification model can help wound specialists classify wound types with less financial and time costs and also help in deciding on the optimal treatment method. Traditional machine learning models suffer from feature selection and are usually cumbersome models for accurate recognition. Recently, deep learning (DL) has emerged as a powerful tool in wound diagnosis. Although DL seems promising for wound type recognition, there is still a large scope for improving the efficiency and accuracy of the model. In this study, a DL-based multimodal classifier was developed using wound images and their corresponding locations to classify them into multiple classes, including diabetic, pressure, surgical, and venous ulcers. A body map was also created to provide location data, which can help wound specialists label wound locations more effectively. The model uses a Vision Transformer to extract hierarchical features from input images, a Discrete Wavelet Transform (DWT) layer to capture low and high frequency components, and a Transformer to extract spatial features. The number of neurons and weight vector optimization were performed using three swarm-based optimization techniques (Monster Gorilla Toner (MGTO), Improved Gray Wolf Optimization (IGWO), and Fox Optimization Algorithm). The evaluation results show that weight vector optimization using optimization algorithms can increase diagnostic accuracy and make it a very effective approach for wound detection. In the classification using the original body map, the proposed model was able to achieve an accuracy of 0.8123 using image data and an accuracy of 0.8007 using a combination of image data and wound location. Also, the accuracy of the model in combination with the optimization models varied from 0.7801 to 0.8342.
Human-Oriented Image Retrieval System (HORSE): A Neuro-Symbolic Approach to Optimizing Retrieval of Previewed Images
Venue: arXiv cs.IR 2025
Year: 2025

Image retrieval remains a challenging task due to the complex interaction between human visual perception, memory, and computational processes. Current image search engines often struggle to efficiently retrieve images based on natural language descriptions, as they rely on time-consuming preprocessing, tagging, and machine learning pipelines. This paper introduces the Human-Oriented Retrieval Search Engine for Images (HORSE), a novel approach that leverages neuro-symbolic indexing to improve image retrieval by focusing on human-oriented indexing. By integrating cognitive science insights with advanced computational techniques, HORSE enhances the retrieval process, making it more aligned with how humans perceive, store, and recall visual information. The neuro-symbolic framework combines the strengths of neural networks and symbolic reasoning, mitigating their individual limitations. The proposed system optimizes image retrieval, offering a more intuitive and efficient solution for users. We discuss the design and implementation of HORSE, highlight its potential applications in fields such as design error detection and knowledge management, and suggest future directions for research to further refine the system's metrics and capabilities.
ColorBench: Can VLMs See and Understand the Colorful World? A Comprehensive Benchmark for Color Perception, Reasoning, and Robustness
Venue: arXiv cs.CV 2025
Year: 2025

Color plays an important role in human perception and usually provides critical clues in visual reasoning. However, it is unclear whether and how vision-language models (VLMs) can perceive, understand, and leverage color as humans. This paper introduces ColorBench, an innovative benchmark meticulously crafted to assess the capabilities of VLMs in color understanding, including color perception, reasoning, and robustness. By curating a suite of diverse test scenarios, with grounding in real applications, ColorBench evaluates how these models perceive colors, infer meanings from color-based cues, and maintain consistent performance under varying color transformations. Through an extensive evaluation of 32 VLMs with varying language models and vision encoders, our paper reveals some undiscovered findings: (i) The scaling law (larger models are better) still holds on ColorBench, while the language model plays a more important role than the vision encoder. (ii) However, the performance gaps across models are relatively small, indicating that color understanding has been largely neglected by existing VLMs. (iii) CoT reasoning improves color understanding accuracies and robustness, though they are vision-centric tasks. (iv) Color clues are indeed leveraged by VLMs on ColorBench but they can also mislead models in some tasks. These findings highlight the critical limitations of current VLMs and underscore the need to enhance color comprehension. Our ColorBenchcan serve as a foundational tool for advancing the study of human-level color understanding of multimodal AI.
Automated Testing of COBOL to Java Transformation
Venue: arXiv cs.SE 2025
Year: 2025

Recent advances in Large Language Model (LLM) based Generative AI techniques have made it feasible to translate enterprise-level code from legacy languages such as COBOL to modern languages such as Java or Python. While the results of LLM-based automatic transformation are encouraging, the resulting code cannot be trusted to correctly translate the original code, making manual validation of translated Java code from COBOL a necessary but time-consuming and labor-intensive process. In this paper, we share our experience of developing a testing framework for IBM Watsonx Code Assistant for Z (WCA4Z) [5], an industrial tool designed for COBOL to Java translation. The framework automates the process of testing the functional equivalence of the translated Java code against the original COBOL programs in an industry context. Our framework uses symbolic execution to generate unit tests for COBOL, mocking external calls and transforming them into JUnit tests to validate semantic equivalence with translated Java. The results not only help identify and repair any detected discrepancies but also provide feedback to improve the AI model.
LEMUR Neural Network Dataset: Towards Seamless AutoML
Venue: arXiv cs.LG 2025
Year: 2025

Neural networks are the backbone of modern artificial intelligence, but designing, evaluating, and comparing them remains labor-intensive. While numerous datasets exist for training, there are few standardized collections of the models themselves. We introduce LEMUR, an open-source dataset and framework that provides a large collection of PyTorch-based neural networks across tasks such as classification, segmentation, detection, and natural language processing. Each model follows a unified template, with configurations and results stored in a structured database to ensure consistency and reproducibility. LEMUR integrates automated hyperparameter optimization via Optuna, includes statistical analysis and visualization tools, and offers an API for seamless access to performance data. The framework is extensible, allowing researchers to add new models, datasets, or metrics without breaking compatibility. By standardizing implementations and unifying evaluation, LEMUR aims to accelerate AutoML research, enable fair benchmarking, and reduce barriers to large-scale neural network experimentation. To support adoption and collaboration, LEMUR and its plugins are released under the MIT license at: https://github.com/ABrain-One/nn-dataset https://github.com/ABrain-One/nn-plots https://github.com/ABrain-One/nn-vr
Beyond the Generative Learning Trilemma: Generative Model Assessment in Data Scarcity Domains
Venue: arXiv cs.LG 2025
Year: 2025

Data scarcity remains a critical bottleneck impeding technological advancements across various domains, including but not limited to medicine and precision agriculture. To address this challenge, we explore the potential of Deep Generative Models (DGMs) in producing synthetic data that satisfies the Generative Learning Trilemma: fidelity, diversity, and sampling efficiency. However, recognizing that these criteria alone are insufficient for practical applications, we extend the trilemma to include utility, robustness, and privacy, factors crucial for ensuring the applicability of DGMs in real-world scenarios. Evaluating these metrics becomes particularly challenging in data-scarce environments, as DGMs traditionally rely on large datasets to perform optimally. This limitation is especially pronounced in domains like medicine and precision agriculture, where ensuring acceptable model performance under data constraints is vital. To address these challenges, we assess the Generative Learning Trilemma in data-scarcity settings using state-of-the-art evaluation metrics, comparing three prominent DGMs: Variational Autoencoders (VAEs), Generative Adversarial Networks (GANs), and Diffusion Models (DMs). Furthermore, we propose a comprehensive framework to assess utility, robustness, and privacy in synthetic data generated by DGMs. Our findings demonstrate varying strengths among DGMs, with each model exhibiting unique advantages based on the application context. This study broadens the scope of the Generative Learning Trilemma, aligning it with real-world demands and providing actionable guidance for selecting DGMs tailored to specific applications.
VAE-based Feature Disentanglement for Data Augmentation and Compression in Generalized GNSS Interference Classification
Venue: arXiv cs.LG 2025
Year: 2025

Distributed learning and Edge AI necessitate efficient data processing, low-latency communication, decentralized model training, and stringent data privacy to facilitate real-time intelligence on edge devices while reducing dependency on centralized infrastructure and ensuring high model performance. In the context of global navigation satellite system (GNSS) applications, the primary objective is to accurately monitor and classify interferences that degrade system performance in distributed environments, thereby enhancing situational awareness. To achieve this, machine learning (ML) models can be deployed on low-resource devices, ensuring minimal communication latency and preserving data privacy. The key challenge is to compress ML models while maintaining high classification accuracy. In this paper, we propose variational autoencoders (VAEs) for disentanglement to extract essential latent features that enable accurate classification of interferences. We demonstrate that the disentanglement approach can be leveraged for both data compression and data augmentation by interpolating the lower-dimensional latent representations of signal power. To validate our approach, we evaluate three VAE variants - vanilla, factorized, and conditional generative - on four distinct datasets, including two collected in controlled indoor environments and two real-world highway datasets. Additionally, we conduct extensive hyperparameter searches to optimize performance. Our proposed VAE achieves a data compression rate ranging from 512 to 8,192 and achieves an accuracy up to 99.92%.
The Code Barrier: What LLMs Actually Understand?
Venue: arXiv cs.SE 2025
Year: 2025

Understanding code represents a core ability needed for automating software development tasks. While foundation models like LLMs show impressive results across many software engineering challenges, the extent of their true semantic understanding beyond simple token recognition remains unclear. This research uses code obfuscation as a structured testing framework to evaluate LLMs' semantic understanding capabilities. We methodically apply controlled obfuscation changes to source code and measure comprehension through two complementary tasks: generating accurate descriptions of obfuscated code and performing deobfuscation, a skill with important implications for reverse engineering applications. Our testing approach includes 13 cutting-edge models, covering both code-specialized (e.g., StarCoder2) and general-purpose (e.g., GPT-4o) architectures, evaluated on a benchmark created from CodeNet and consisting of filtered 250 Java programming problems and their solutions. Findings show a statistically significant performance decline as obfuscation complexity increases, with unexpected resilience shown by general-purpose models compared to their code-focused counterparts. While some models successfully identify obfuscation techniques, their ability to reconstruct the underlying program logic remains constrained, suggesting limitations in their semantic representation mechanisms. This research introduces a new evaluation approach for assessing code comprehension in language models and establishes empirical baselines for advancing research in security-critical code analysis applications such as reverse engineering and adversarial code analysis.