OpenRaiser/Intern-Atlas huggingface dataset:
AI-Driven Predictive Analytics Approach for Early Prognosis of Chronic Kidney Disease Using Ensemble Learning and Explainable AI
Venue: arXiv cs.LG 2025
Year: 2025

Chronic Kidney Disease (CKD) is one of the widespread Chronic diseases with no known ultimo cure and high morbidity. Research demonstrates that progressive Chronic Kidney Disease (CKD) is a heterogeneous disorder that significantly impacts kidney structure and functions, eventually leading to kidney failure. With the progression of time, chronic kidney disease has moved from a life-threatening disease affecting few people to a common disorder of varying severity. The goal of this research is to visualize dominating features, feature scores, and values exhibited for early prognosis and detection of CKD using ensemble learning and explainable AI. For that, an AI-driven predictive analytics approach is proposed to aid clinical practitioners in prescribing lifestyle modifications for individual patients to reduce the rate of progression of this disease. Our dataset is collected on body vitals from individuals with CKD and healthy subjects to develop our proposed AI-driven solution accurately. In this regard, blood and urine test results are provided, and ensemble tree-based machine-learning models are applied to predict unseen cases of CKD. Our research findings are validated after lengthy consultations with nephrologists. Our experiments and interpretation results are compared with existing explainable AI applications in various healthcare domains, including CKD. The comparison shows that our developed AI models, particularly the Random Forest model, have identified more features as significant contributors than XgBoost. Interpretability (I), which measures the ratio of important to masked features, indicates that our XgBoost model achieved a higher score, specifically a Fidelity of 98\%, in this metric and naturally in the FII index compared to competing models.
Enabling Data Dependency-based Query Optimization
Venue: arXiv cs.DB 2025
Year: 2025

Primary key (PK) and foreign key (FK) constraints are widely used for query optimization. Knowledge about additional data dependencies, such as order dependencies, enables further substantial performance improvements. However, such dependencies are not maintained by database systems or are even unknown to the user. Identifying and validating relevant dependencies automatically and efficiently remains an unsolved problem. This paper presents a system that (i) recognizes dependency candidates for optimization, (ii) efficiently validates their applicability, and (iii) optimizes query plans using valid dependencies. First, we demonstrate the performance impact of optimization techniques using data dependencies additional to PKs and FKs. Using rewritten SQL queries, we empirically show that data dependencies improve performance for a wide range of analytical database systems and benchmarks. Second, we present how to integrate data dependencies into a system to use them without (i) manual declaration and maintenance or (ii) SQL rewrites. Our integrated and fully automated system matches the performance of dedicated SQL rewrites: compared to using only PKs and FKs, queries improve with geometric mean speedups of 35 % for TPC-DS and 29 % for JOB. Individual query latencies drop by more than 90 %. The dependency discovery overhead is orders of magnitude lower than the latency improvement of a single workload execution.
Unleashing the Denoising Capability of Diffusion Prior for Solving Inverse Problems
Venue: arXiv cs.LG 2025
Year: 2025

The recent emergence of diffusion models has significantly advanced the precision of learnable priors, presenting innovative avenues for addressing inverse problems. Since inverse problems inherently entail maximum a posteriori estimation, previous works have endeavored to integrate diffusion priors into the optimization frameworks. However, prevailing optimization-based inverse algorithms primarily exploit the prior information within the diffusion models while neglecting their denoising capability. To bridge this gap, this work leverages the diffusion process to reframe noisy inverse problems as a two-variable constrained optimization task by introducing an auxiliary optimization variable. By employing gradient truncation, the projection gradient descent method is efficiently utilized to solve the corresponding optimization problem. The proposed algorithm, termed ProjDiff, effectively harnesses the prior information and the denoising capability of a pre-trained diffusion model within the optimization framework. Extensive experiments on the image restoration tasks and source separation and partial generation tasks demonstrate that ProjDiff exhibits superior performance across various linear and nonlinear inverse problems, highlighting its potential for practical applications. Code is available at https://github.com/weigerzan/ProjDiff/.
Evolving from Single-modal to Multi-modal Facial Deepfake Detection: Progress and Challenges
Venue: arXiv cs.CV 2025
Year: 2025

As synthetic media, including video, audio, and text, become increasingly indistinguishable from real content, the risks of misinformation, identity fraud, and social manipulation escalate. This survey traces the evolution of deepfake detection from early single-modal methods to sophisticated multi-modal approaches that integrate audio-visual and text-visual cues. We present a structured taxonomy of detection techniques and analyze the transition from GAN-based to diffusion model-driven deepfakes, which introduce new challenges due to their heightened realism and robustness against detection. Unlike prior surveys that primarily focus on single-modal detection or earlier deepfake techniques, this work provides the most comprehensive study to date, encompassing the latest advancements in multi-modal deepfake detection, generalization challenges, proactive defense mechanisms, and emerging datasets specifically designed to support new interpretability and reasoning tasks. We further explore the role of Vision-Language Models (VLMs) and Multimodal Large Language Models (MLLMs) in strengthening detection robustness against increasingly sophisticated deepfake attacks. By systematically categorizing existing methods and identifying emerging research directions, this survey serves as a foundation for future advancements in combating AI-generated facial forgeries. A curated list of all related papers can be found at \href{https://github.com/qiqitao77/Comprehensive-Advances-in-Deepfake-Detection-Spanning-Diverse-Modalities}{https://github.com/qiqitao77/Awesome-Comprehensive-Deepfake-Detection}.
Marginalization Consistent Probabilistic Forecasting of Irregular Time Series via Mixture of Separable flows
Venue: arXiv cs.LG 2025
Year: 2025

Probabilistic forecasting models for joint distributions of targets in irregular time series with missing values are a heavily under-researched area in machine learning, with, to the best of our knowledge, only two Models have been researched so far: The Gaussian Process Regression model, and ProFITi. While ProFITi, thanks to using multivariate normalizing flows, is very expressive, leading to better predictive performance, it suffers from marginalization inconsistency: It does not guarantee that the marginal distributions of a subset of variables in its predictive distributions coincide with the directly predicted distributions of these variables. When asked to directly predict marginal distributions, they are often vastly inaccurate. We propose MOSES (Marginalization Consistent Mixture of Separable Flows), a model that parametrizes a stochastic process through a mixture of several latent multivariate Gaussian Processes combined with separable univariate Normalizing Flows. In particular, MOSES can be analytically marginalized, allowing it to directly answer a wider range of probabilistic queries than most competitors. Experiments on four datasets show that MOSES achieves both accurate joint and marginal predictions, surpassing all other marginalization consistent baselines, while only trailing slightly behind ProFITi in joint prediction, but vastly superior when predicting marginal distributions.
SemlaFlow -- Efficient 3D Molecular Generation with Latent Attention and Equivariant Flow Matching
Venue: arXiv cs.LG 2025
Year: 2025

Methods for jointly generating molecular graphs along with their 3D conformations have gained prominence recently due to their potential impact on structure-based drug design. Current approaches, however, often suffer from very slow sampling times or generate molecules with poor chemical validity. Addressing these limitations, we propose Semla, a scalable E(3)-equivariant message passing architecture. We further introduce an unconditional 3D molecular generation model, SemlaFlow, which is trained using equivariant flow matching to generate a joint distribution over atom types, coordinates, bond types and formal charges. Our model produces state-of-the-art results on benchmark datasets with as few as 20 sampling steps, corresponding to a two order-of-magnitude speedup compared to state-of-the-art. Furthermore, we highlight limitations of current evaluation methods for 3D generation and propose new benchmark metrics for unconditional molecular generators. Finally, using these new metrics, we compare our model's ability to generate high quality samples against current approaches and further demonstrate SemlaFlow's strong performance.
Advancing Grounded Multimodal Named Entity Recognition via LLM-Based Reformulation and Box-Based Segmentation
Venue: arXiv cs.MM 2025
Year: 2025

Grounded Multimodal Named Entity Recognition (GMNER) task aims to identify named entities, entity types and their corresponding visual regions. GMNER task exhibits two challenging attributes: 1) The tenuous correlation between images and text on social media contributes to a notable proportion of named entities being ungroundable. 2) There exists a distinction between coarse-grained noun phrases used in similar tasks (e.g., phrase localization) and fine-grained named entities. In this paper, we propose RiVEG, a unified framework that reformulates GMNER into a joint MNER-VE-VG task by leveraging large language models (LLMs) as connecting bridges. This reformulation brings two benefits: 1) It enables us to optimize the MNER module for optimal MNER performance and eliminates the need to pre-extract region features using object detection methods, thus naturally addressing the two major limitations of existing GMNER methods. 2) The introduction of Entity Expansion Expression module and Visual Entailment (VE) module unifies Visual Grounding (VG) and Entity Grounding (EG). This endows the proposed framework with unlimited data and model scalability. Furthermore, to address the potential ambiguity stemming from the coarse-grained bounding box output in GMNER, we further construct the new Segmented Multimodal Named Entity Recognition (SMNER) task and corresponding Twitter-SMNER dataset aimed at generating fine-grained segmentation masks, and experimentally demonstrate the feasibility and effectiveness of using box prompt-based Segment Anything Model (SAM) to empower any GMNER model with the ability to accomplish the SMNER task. Extensive experiments demonstrate that RiVEG significantly outperforms SoTA methods on four datasets across the MNER, GMNER, and SMNER tasks.
COLoRIS: Localization-agnostic Smart Surfaces Enabling Opportunistic ISAC in 6G Networks
Venue: arXiv cs.NI 2025
Year: 2025

The integration of Smart Surfaces in 6G communication networks, also dubbed as Reconfigurable Intelligent Surfaces (RISs), is a promising paradigm change gaining significant attention given its disruptive features. RISs are a key enabler in the realm of 6G Integrated Sensing and Communication (ISAC) systems where novel services can be offered together with the future mobile networks communication capabilities. This paper addresses the critical challenge of precisely localizing users within a communication network by leveraging the controlled-reflective properties of RIS elements without relying on more power-hungry traditional methods, e.g., GPS, adverting the need of deploying additional infrastructure and even avoiding interfering with communication efforts. Moreover, we go one step beyond: we build COLoRIS, an Opportunistic ISAC approach that leverages localization-agnostic RIS configurations to accurately position mobile users via trained learning models. Extensive experimental validation and simulations in large-scale synthetic scenarios show 5% positioning errors (with respect to field size) under different conditions. Further, we show that a low-complexity version running in a limited off-the-shelf (embedded, low-power) system achieves positioning errors in the 11% range at a negligible +2.7% energy expense with respect to the classical RIS.
MambaLRP: Explaining Selective State Space Sequence Models
Venue: arXiv cs.LG 2025
Year: 2025

Recent sequence modeling approaches using selective state space sequence models, referred to as Mamba models, have seen a surge of interest. These models allow efficient processing of long sequences in linear time and are rapidly being adopted in a wide range of applications such as language modeling, demonstrating promising performance. To foster their reliable use in real-world scenarios, it is crucial to augment their transparency. Our work bridges this critical gap by bringing explainability, particularly Layer-wise Relevance Propagation (LRP), to the Mamba architecture. Guided by the axiom of relevance conservation, we identify specific components in the Mamba architecture, which cause unfaithful explanations. To remedy this issue, we propose MambaLRP, a novel algorithm within the LRP framework, which ensures a more stable and reliable relevance propagation through these components. Our proposed method is theoretically sound and excels in achieving state-of-the-art explanation performance across a diverse range of models and datasets. Moreover, MambaLRP facilitates a deeper inspection of Mamba architectures, uncovering various biases and evaluating their significance. It also enables the analysis of previous speculations regarding the long-range capabilities of Mamba models.
Scalable UTXO Smart Contracts via Fine-Grained Distributed State
Venue: arXiv cs.CR 2025
Year: 2025

UTXO-based smart contract platforms face an efficiency bottleneck, in that any transaction sent to a contract must specify the entire updated contract state. This requirement becomes particularly burdensome when the contract state contains dynamic data structures, as needed in many use cases to track interactions between users and the contract. The problem is twofold: on the one hand, a large state in transactions implies a large transaction fee; on the other hand, a large centralized state is detrimental to the parallelization of transactions - a feature that is often cited as a key advantage of UTXO-based blockchains over account-based ones. We propose a technique to efficiently execute smart contracts on an extended UTXO blockchain, which allows the contract state to be distributed across multiple UTXOs. In this way, transactions only need to specify the part of the state they need to access, reducing their size (and fees). We show how to exploit our model to parallelize the validation of transactions on multi-core CPUs. We implement our technique and provide an empirical validation of its effectiveness.
Visibility-Aware RRT* for Safety-Critical Navigation of Perception-Limited Robots in Unknown Environments
Venue: arXiv cs.RO 2025
Year: 2025

Safe autonomous navigation in unknown environments remains a critical challenge for robots with limited sensing capabilities. While safety-critical control techniques, such as Control Barrier Functions (CBFs), have been proposed to ensure safety, their effectiveness relies on the assumption that the robot has complete knowledge of its surroundings. In reality, robots often operate with restricted field-of-view and finite sensing range, which can lead to collisions with unknown obstacles if the planner is agnostic to these limitations. To address this issue, we introduce the Visibility-Aware RRT* algorithm that combines sampling-based planning with CBFs to generate safe and efficient global reference paths in partially unknown environments. The algorithm incorporates a collision avoidance CBF and a novel visibility CBF, which guarantees that the robot remains within locally collision-free regions, enabling timely detection and avoidance of unknown obstacles. We conduct extensive experiments interfacing the path planners with two different safety-critical controllers, wherein our method outperforms all other compared baselines across both safety and efficiency aspects.
Optimizing Container Loading and Unloading through Dual-Cycling and Dockyard Rehandle Reduction Using a Hybrid Genetic Algorithm
Venue: arXiv cs.NE 2025
Year: 2025

This paper addresses the NP-hard problem of optimizing container handling at ports by integrating Quay Crane Dual-Cycling (QCDC) and dockyard rehandle minimization. We realized that there are interdependencies between the unloading sequence of QCDC and the dockyard plan and propose the Quay Crane Dual Cycle - Dockyard Rehandle Genetic Algorithm (QCDC-DR-GA), a hybrid Genetic Algorithm (GA) that holistically optimizes both aspects: maximizing the number of Dual Cycles (DCs) and minimizing the number of dockyard rehandles. QCDC-DR-GA employs specialized crossover and mutation strategies. Extensive experiments on various ship sizes demonstrate that QCDC-DR-GA reduces total operation time by 15-20% for large ships compared to existing methods. Statistical validation via two-tailed paired t-tests confirms significant improvements at a 5% significance level. The results underscore the inefficiency of isolated optimization and highlight the critical need for integrated algorithms in port operations. This approach increases resource utilization and operational efficiency, offering a cost-effective solution for ports to decrease turnaround times without infrastructure investments.
Noise-Aware Differentially Private Regression via Meta-Learning
Venue: arXiv cs.LG 2025
Year: 2025

Many high-stakes applications require machine learning models that protect user privacy and provide well-calibrated, accurate predictions. While Differential Privacy (DP) is the gold standard for protecting user privacy, standard DP mechanisms typically significantly impair performance. One approach to mitigating this issue is pre-training models on simulated data before DP learning on the private data. In this work we go a step further, using simulated data to train a meta-learning model that combines the Convolutional Conditional Neural Process (ConvCNP) with an improved functional DP mechanism of Hall et al. [2013] yielding the DPConvCNP. DPConvCNP learns from simulated data how to map private data to a DP predictive model in one forward pass, and then provides accurate, well-calibrated predictions. We compare DPConvCNP with a DP Gaussian Process (GP) baseline with carefully tuned hyperparameters. The DPConvCNP outperforms the GP baseline, especially on non-Gaussian data, yet is much faster at test time and requires less tuning.
Time-MMD: Multi-Domain Multimodal Dataset for Time Series Analysis
Venue: arXiv cs.LG 2025
Year: 2025

Time series data are ubiquitous across a wide range of real-world domains. While real-world time series analysis (TSA) requires human experts to integrate numerical series data with multimodal domain-specific knowledge, most existing TSA models rely solely on numerical data, overlooking the significance of information beyond numerical series. This oversight is due to the untapped potential of textual series data and the absence of a comprehensive, high-quality multimodal dataset. To overcome this obstacle, we introduce Time-MMD, the first multi-domain, multimodal time series dataset covering 9 primary data domains. Time-MMD ensures fine-grained modality alignment, eliminates data contamination, and provides high usability. Additionally, we develop MM-TSFlib, the first-cut multimodal time-series forecasting (TSF) library, seamlessly pipelining multimodal TSF evaluations based on Time-MMD for in-depth analyses. Extensive experiments conducted on Time-MMD through MM-TSFlib demonstrate significant performance enhancements by extending unimodal TSF to multimodality, evidenced by over 15% mean squared error reduction in general, and up to 40% in domains with rich textual data. More importantly, our datasets and library revolutionize broader applications, impacts, research topics to advance TSA. The dataset is available at https://github.com/AdityaLab/Time-MMD.
mOSCAR: A Large-scale Multilingual and Multimodal Document-level Corpus
Venue: arXiv cs.CL 2025
Year: 2025

Multimodal Large Language Models (mLLMs) are trained on a large amount of text-image data. While most mLLMs are trained on caption-like data only, Alayrac et al. (2022) showed that additionally training them on interleaved sequences of text and images can lead to the emergence of in-context learning capabilities. However, the dataset they used, M3W, is not public and is only in English. There have been attempts to reproduce their results but the released datasets are English-only. In contrast, current multilingual and multimodal datasets are either composed of caption-like only or medium-scale or fully private data. This limits mLLM research for the 7,000 other languages spoken in the world. We therefore introduce mOSCAR, to the best of our knowledge the first large-scale multilingual and multimodal document corpus crawled from the web. It covers 163 languages, 303M documents, 200B tokens and 1.15B images. We carefully conduct a set of filtering and evaluation steps to make sure mOSCAR is sufficiently safe, diverse and of good quality. We additionally train two types of multilingual model to prove the benefits of mOSCAR: (1) a model trained on a subset of mOSCAR and captioning data and (2) a model trained on captioning data only. The model additionally trained on mOSCAR shows a strong boost in few-shot learning performance across various multilingual image-text tasks and benchmarks, confirming previous findings for English-only mLLMs. The dataset is released under the Creative Commons CC BY 4.0 license and can be accessed here: https://huggingface.co/datasets/oscar-corpus/mOSCAR
Learning in Feature Spaces via Coupled Covariances: Asymmetric Kernel SVD and Nyström method
Venue: arXiv cs.LG 2025
Year: 2025

In contrast with Mercer kernel-based approaches as used e.g., in Kernel Principal Component Analysis (KPCA), it was previously shown that Singular Value Decomposition (SVD) inherently relates to asymmetric kernels and Asymmetric Kernel Singular Value Decomposition (KSVD) has been proposed. However, the existing formulation to KSVD cannot work with infinite-dimensional feature mappings, the variational objective can be unbounded, and needs further numerical evaluation and exploration towards machine learning. In this work, i) we introduce a new asymmetric learning paradigm based on coupled covariance eigenproblem (CCE) through covariance operators, allowing infinite-dimensional feature maps. The solution to CCE is ultimately obtained from the SVD of the induced asymmetric kernel matrix, providing links to KSVD. ii) Starting from the integral equations corresponding to a pair of coupled adjoint eigenfunctions, we formalize the asymmetric Nyström method through a finite sample approximation to speed up training. iii) We provide the first empirical evaluations verifying the practical utility and benefits of KSVD and compare with methods resorting to symmetrization or linear SVD across multiple tasks.