OpenRaiser/Intern-Atlas huggingface dataset:
Noise or Nuance: An Investigation Into Useful Information and Filtering For LLM Driven AKBC
Venue: arXiv cs.CL 2025
Year: 2025

RAG and fine-tuning are prevalent strategies for improving the quality of LLM outputs. However, in constrained situations, such as that of the 2025 LM-KBC challenge, such techniques are restricted. In this work we investigate three facets of the triple completion task: generation, quality assurance, and LLM response parsing. Our work finds that in this constrained setting: additional information improves generation quality, LLMs can be effective at filtering poor quality triples, and the tradeoff between flexibility and consistency with LLM response parsing is setting dependent.
Diffusion-Based Action Recognition Generalizes to Untrained Domains
Venue: arXiv cs.CV 2025
Year: 2025

Humans can recognize the same actions despite large context and viewpoint variations, such as differences between species (walking in spiders vs. horses), viewpoints (egocentric vs. third-person), and contexts (real life vs movies). Current deep learning models struggle with such generalization. We propose using features generated by a Vision Diffusion Model (VDM), aggregated via a transformer, to achieve human-like action recognition across these challenging conditions. We find that generalization is enhanced by the use of a model conditioned on earlier timesteps of the diffusion process to highlight semantic information over pixel level details in the extracted features. We experimentally explore the generalization properties of our approach in classifying actions across animal species, across different viewing angles, and different recording contexts. Our model sets a new state-of-the-art across all three generalization benchmarks, bringing machine action recognition closer to human-like robustness. Project page: https://www.vision.caltech.edu/actiondiff. Code: https://github.com/frankyaoxiao/ActionDiff
Instance-Optimal Matrix Multiplicative Weight Update and Its Quantum Applications
Venue: arXiv cs.LG 2025
Year: 2025

The Matrix Multiplicative Weight Update (MMWU) is a seminal online learning algorithm with numerous applications. Applied to the matrix version of the Learning from Expert Advice (LEA) problem on the $d$-dimensional spectraplex, it is well known that MMWU achieves the minimax-optimal regret bound of $O(\sqrt{T\log d})$, where $T$ is the time horizon. In this paper, we present an improved algorithm achieving the instance-optimal regret bound of $O(\sqrt{T\cdot S(X||d^{-1}I_d)})$, where $X$ is the comparator in the regret, $I_d$ is the identity matrix, and $S(\cdot||\cdot)$ denotes the quantum relative entropy. Furthermore, our algorithm has the same computational complexity as MMWU, indicating that the improvement in the regret bound is ``free''. Technically, we first develop a general potential-based framework for matrix LEA, with MMWU being its special case induced by the standard exponential potential. Then, the crux of our analysis is a new ``one-sided'' Jensen's trace inequality built on a Laplace transform technique, which allows the application of general potential functions beyond exponential to matrix LEA. Our algorithm is finally induced by an optimal potential function from the vector LEA problem, based on the imaginary error function. Complementing the above, we provide a memory lower bound for matrix LEA, and explore the applications of our algorithm in quantum learning theory. We show that it outperforms the state of the art for learning quantum states corrupted by depolarization noise, random quantum states, and Gibbs states. In addition, applying our algorithm to linearized convex losses enables predicting nonlinear quantum properties, such as purity, quantum virtual cooling, and Rényi-$2$ correlation.
Similarity-based Outlier Detection for Noisy Object Re-Identification Using Beta Mixtures
Venue: arXiv cs.CV 2025
Year: 2025

Object re-identification (Re-ID) methods are highly sensitive to label noise, which typically leads to significant performance degradation. We address this challenge by reframing Re-ID as a supervised image similarity task and adopting a Siamese network architecture trained to capture discriminative pairwise relationships. Central to our approach is a novel statistical outlier detection (OD) framework, termed Beta-SOD (Beta mixture Similarity-based Outlier Detection), which models the distribution of cosine similarities between embedding pairs using a two-component Beta distribution mixture model. We establish a novel identifiability result for mixtures of two Beta distributions, ensuring that our learning task is well-posed. The proposed OD step complements the Re-ID architecture combining binary cross-entropy, contrastive, and cosine embedding losses that jointly optimize feature-level similarity learning. We demonstrate the effectiveness of Beta-SOD in de-noising and Re-ID tasks for person Re-ID, on CUHK03 and Market-1501 datasets, and vehicle Re-ID, on VeRi-776 dataset. Our method shows superior performance compared to the state-of-the-art methods across various noise levels (10-30\%), demonstrating both robustness and broad applicability in noisy Re-ID scenarios. The implementation of Beta-SOD is available at: github.com/waqar3411/Beta-SOD
SFD-Mamba2Net: Structure-Guided Frequency-Enhanced Dual-Stream Mamba2 Network for Coronary Artery Segmentation
Venue: arXiv cs.CV 2025
Year: 2025

Background: Coronary Artery Disease (CAD) is one of the leading causes of death worldwide. Invasive Coronary Angiography (ICA), regarded as the gold standard for CAD diagnosis, necessitates precise vessel segmentation and stenosis detection. However, ICA images are typically characterized by low contrast, high noise levels, and complex, fine-grained vascular structures, which pose significant challenges to the clinical adoption of existing segmentation and detection methods. Objective: This study aims to improve the accuracy of coronary artery segmentation and stenosis detection in ICA images by integrating multi-scale structural priors, state-space-based long-range dependency modeling, and frequency-domain detail enhancement strategies. Methods: We propose SFD-Mamba2Net, an end-to-end framework tailored for ICA-based vascular segmentation and stenosis detection. In the encoder, a Curvature-Aware Structural Enhancement (CASE) module is embedded to leverage multi-scale responses for highlighting slender tubular vascular structures, suppressing background interference, and directing attention toward vascular regions. In the decoder, we introduce a Progressive High-Frequency Perception (PHFP) module that employs multi-level wavelet decomposition to progressively refine high-frequency details while integrating low-frequency global structures. Results and Conclusions: SFD-Mamba2Net consistently outperformed state-of-the-art methods across eight segmentation metrics, and achieved the highest true positive rate and positive predictive value in stenosis detection.
CoSwin: Convolution Enhanced Hierarchical Shifted Window Attention For Small-Scale Vision
Venue: arXiv cs.CV 2025
Year: 2025

Vision Transformers (ViTs) have achieved impressive results in computer vision by leveraging self-attention to model long-range dependencies. However, their emphasis on global context often comes at the expense of local feature extraction in small datasets, particularly due to the lack of key inductive biases such as locality and translation equivariance. To mitigate this, we propose CoSwin, a novel feature-fusion architecture that augments the hierarchical shifted window attention with localized convolutional feature learning. Specifically, CoSwin integrates a learnable local feature enhancement module into each attention block, enabling the model to simultaneously capture fine-grained spatial details and global semantic structure. We evaluate CoSwin on multiple image classification benchmarks including CIFAR-10, CIFAR-100, MNIST, SVHN, and Tiny ImageNet. Our experimental results show consistent performance gains over state-of-the-art convolutional and transformer-based models. Notably, CoSwin achieves improvements of 2.17% on CIFAR-10, 4.92% on CIFAR-100, 0.10% on MNIST, 0.26% on SVHN, and 4.47% on Tiny ImageNet over the baseline Swin Transformer. These improvements underscore the effectiveness of local-global feature fusion in enhancing the generalization and robustness of transformers for small-scale vision. Code and pretrained weights available at https://github.com/puskal-khadka/coswin
Value bounds and Convergence Analysis for Averages of LRP attributions
Venue: arXiv cs.LG 2025
Year: 2025

We analyze numerical properties of Layer-wise relevance propagation (LRP)-type attribution methods by representing them as a product of modified gradient matrices. This representation creates an analogy to matrix multiplications of Jacobi-matrices which arise from the chain rule of differentiation. In order to shed light on the distribution of attribution values, we derive upper bounds for singular values. Furthermore we derive component-wise bounds for attribution map values. As a main result, we apply these component-wise bounds to obtain multiplicative constants. These constants govern the convergence of empirical means of attributions to expectations of attribution maps. This finding has important implications for scenarios where multiple non-geometric data augmentations are applied to individual test samples, as well as for Smoothgrad-type attribution methods. In particular, our analysis reveals that the constants for LRP-beta remain independent of weight norms, a significant distinction from both gradient-based methods and LRP-epsilon.
Implicit Neural Representations of Intramyocardial Motion and Strain
Venue: arXiv cs.CV 2025
Year: 2025

Automatic quantification of intramyocardial motion and strain from tagging MRI remains an important but challenging task. We propose a method using implicit neural representations (INRs), conditioned on learned latent codes, to predict continuous left ventricular (LV) displacement -- without requiring inference-time optimisation. Evaluated on 452 UK Biobank test cases, our method achieved the best tracking accuracy (2.14 mm RMSE) and the lowest combined error in global circumferential (2.86%) and radial (6.42%) strain compared to three deep learning baselines. In addition, our method is $\sim$380$\times$ faster than the most accurate baseline. These results highlight the suitability of INR-based models for accurate and scalable analysis of myocardial strain in large CMR datasets. The code can be found at https://github.com/andrewjackbell/Displacement-INR
Open-sci-ref-0.01: open and reproducible reference baselines for language model and dataset comparison
Venue: arXiv cs.LG 2025
Year: 2025

We introduce open-sci-ref, a family of dense transformer models trained as research baselines across multiple model (0.13B to 1.7B parameters) and token scales (up to 1T) on 8 recent open reference datasets. Evaluating the models on various standardized benchmarks, our training runs set establishes reference points that enable researchers to assess the sanity and quality of alternative training approaches across scales and datasets. Intermediate checkpoints allow comparison and studying of the training dynamics. The established reference baselines allow training procedures to be compared through their scaling trends, aligning them on a common compute axis. Comparison of open reference datasets reveals that training on NemoTron-CC HQ consistently outperforms other reference datasets, followed by DCLM-baseline and FineWeb-Edu. In addition to intermediate training checkpoints, the release includes logs, code, and downstream evaluations to simplify reproduction, standardize comparison, and facilitate future research.
Optimizing the Variant Calling Pipeline Execution on Human Genomes Using GPU-Enabled Machines
Venue: arXiv cs.DC 2025
Year: 2025

Variant calling is the first step in analyzing a human genome and aims to detect variants in an individual's genome compared to a reference genome. Due to the computationally-intensive nature of variant calling, genomic data are increasingly processed in cloud environments as large amounts of compute and storage resources can be acquired with the pay-as-you-go pricing model. In this paper, we address the problem of efficiently executing a variant calling pipeline for a workload of human genomes on graphics processing unit (GPU)-enabled machines. We propose a novel machine learning (ML)-based approach for optimizing the workload execution to minimize the total execution time. Our approach encompasses two key techniques: The first technique employs ML to predict the execution times of different stages in a variant calling pipeline based on the characteristics of a genome sequence. Using the predicted times, the second technique generates optimal execution plans for the machines by drawing inspiration from the flexible job shop scheduling problem. The plans are executed via careful synchronization across different machines. We evaluated our approach on a workload of publicly available genome sequences using a testbed with different types of GPU hardware. We observed that our approach was effective in predicting the execution times of variant calling pipeline stages using ML on features such as sequence size, read quality, percentage of duplicate reads, and average read length. In addition, our approach achieved 2X speedup (on an average) over a greedy approach that also used ML for predicting the execution times on the tested workload of sequences. Finally, our approach achieved 1.6X speedup (on an average) over a dynamic approach that executed the workload based on availability of resources without using any ML-based time predictions.
Instructional Prompt Optimization for Few-Shot LLM-Based Recommendations on Cold-Start Users
Venue: arXiv cs.AI 2025
Year: 2025

The cold-start user issue further compromises the effectiveness of recommender systems in limiting access to the historical behavioral information. It is an effective pipeline to optimize instructional prompts on a few-shot large language model (LLM) used in recommender tasks. We introduce a context-conditioned prompt formulation method P(u,\ Ds)\ \rightarrow\ R\widehat, where u is a cold-start user profile, Ds is a curated support set, and R\widehat is the predicted ranked list of items. Based on systematic experimentation with transformer-based autoregressive LLMs (BioGPT, LLaMA-2, GPT-4), we provide empirical evidence that optimal exemplar injection and instruction structuring can significantly improve the precision@k and NDCG scores of such models in low-data settings. The pipeline uses token-level alignments and embedding space regularization with a greater semantic fidelity. Our findings not only show that timely composition is not merely syntactic but also functional as it is in direct control of attention scales and decoder conduct through inference. This paper shows that prompt-based adaptation may be considered one of the ways to address cold-start recommendation issues in LLM-based pipelines.
Persuasion Gains and Losses from Peer Communication
Venue: arXiv cs.GT 2025
Year: 2025

We study a Bayesian persuasion setting in which a sender wants to persuade a critical mass of receivers by revealing partial information about the state to them. The homogeneous binary-action receivers are located on a communication network, and each observes the private messages sent to them and their immediate neighbors. We examine how the sender's expected utility varies with increased communication among receivers. We show that for general families of networks, extending the network can strictly benefit the sender. Thus, the sender's gain from persuasion is not monotonic in network density. Moreover, many network extensions can achieve the upper bound on the sender's expected utility among all networks, which corresponds to the payoff in an empty network. This is the case in networks reflecting a clear informational hierarchy (e.g., in global corporations), as well as in decentralized networks in which information originates from multiple sources (e.g., influencers in social media). Finally, we show that a slight modification to the structure of some of these networks precludes the possibility of such beneficial extensions. Overall, our results caution against presuming that more communication necessarily leads to better collective outcomes.
Objectness Similarity: Capturing Object-Level Fidelity in 3D Scene Evaluation
Venue: arXiv cs.CV 2025
Year: 2025

This paper presents Objectness SIMilarity (OSIM), a novel evaluation metric for 3D scenes that explicitly focuses on "objects," which are fundamental units of human visual perception. Existing metrics assess overall image quality, leading to discrepancies with human perception. Inspired by neuropsychological insights, we hypothesize that human recognition of 3D scenes fundamentally involves attention to individual objects. OSIM enables object-centric evaluations by leveraging an object detection model and its feature representations to quantify the "objectness" of each object in the scene. Our user study demonstrates that OSIM aligns more closely with human perception compared to existing metrics. We also analyze the characteristics of OSIM using various approaches. Moreover, we re-evaluate recent 3D reconstruction and generation models under a standardized experimental setup to clarify advancements in this field. The code is available at https://github.com/Objectness-Similarity/OSIM.
OCELOT 2023: Cell Detection from Cell-Tissue Interaction Challenge
Venue: arXiv cs.CV 2025
Year: 2025

Pathologists routinely alternate between different magnifications when examining Whole-Slide Images, allowing them to evaluate both broad tissue morphology and intricate cellular details to form comprehensive diagnoses. However, existing deep learning-based cell detection models struggle to replicate these behaviors and learn the interdependent semantics between structures at different magnifications. A key barrier in the field is the lack of datasets with multi-scale overlapping cell and tissue annotations. The OCELOT 2023 challenge was initiated to gather insights from the community to validate the hypothesis that understanding cell and tissue (cell-tissue) interactions is crucial for achieving human-level performance, and to accelerate the research in this field. The challenge dataset includes overlapping cell detection and tissue segmentation annotations from six organs, comprising 673 pairs sourced from 306 The Cancer Genome Atlas (TCGA) Whole-Slide Images with hematoxylin and eosin staining, divided into training, validation, and test subsets. Participants presented models that significantly enhanced the understanding of cell-tissue relationships. Top entries achieved up to a 7.99 increase in F1-score on the test set compared to the baseline cell-only model that did not incorporate cell-tissue relationships. This is a substantial improvement in performance over traditional cell-only detection methods, demonstrating the need for incorporating multi-scale semantics into the models. This paper provides a comparative analysis of the methods used by participants, highlighting innovative strategies implemented in the OCELOT 2023 challenge.
CWSSNet: Hyperspectral Image Classification Enhanced by Wavelet Domain Convolution
Venue: arXiv cs.CV 2025
Year: 2025

Hyperspectral remote sensing technology has significant application value in fields such as forestry ecology and precision agriculture, while also putting forward higher requirements for fine ground object classification. However, although hyperspectral images are rich in spectral information and can improve recognition accuracy, they tend to cause prominent feature redundancy due to their numerous bands, high dimensionality, and spectral mixing characteristics. To address this, this study used hyperspectral images from the ZY1F satellite as a data source and selected Yugan County, Shangrao City, Jiangxi Province as the research area to perform ground object classification research. A classification framework named CWSSNet was proposed, which integrates 3D spectral-spatial features and wavelet convolution. This framework integrates multimodal information us-ing a multiscale convolutional attention module and breaks through the classification performance bottleneck of traditional methods by introducing multi-band decomposition and convolution operations in the wavelet domain. The experiments showed that CWSSNet achieved 74.50\%, 82.73\%, and 84.94\% in mean Intersection over Union (mIoU), mean Accuracy (mAcc), and mean F1-score (mF1) respectively in Yugan County. It also obtained the highest Intersection over Union (IoU) in the classifica-tion of water bodies, vegetation, and bare land, demonstrating good robustness. Additionally, when the training set proportion was 70\%, the increase in training time was limited, and the classification effect was close to the optimal level, indicating that the model maintains reliable performance under small-sample training conditions.
MGTraj: Multi-Granularity Goal-Guided Human Trajectory Prediction with Recursive Refinement Network
Venue: arXiv cs.CV 2025
Year: 2025

Accurate human trajectory prediction is crucial for robotics navigation and autonomous driving. Recent research has demonstrated that incorporating goal guidance significantly enhances prediction accuracy by reducing uncertainty and leveraging prior knowledge. Most goal-guided approaches decouple the prediction task into two stages: goal prediction and subsequent trajectory completion based on the predicted goal, which operate at extreme granularities: coarse-grained goal prediction forecasts the overall intention, while fine-grained trajectory completion needs to generate the positions for all future timesteps. The potential utility of intermediate temporal granularity remains largely unexplored, which motivates multi-granularity trajectory modeling. While prior work has shown that multi-granularity representations capture diverse scales of human dynamics and motion patterns, effectively integrating this concept into goal-guided frameworks remains challenging. In this paper, we propose MGTraj, a novel Multi-Granularity goal-guided model for human Trajectory prediction. MGTraj recursively encodes trajectory proposals from coarse to fine granularity levels. At each level, a transformer-based recursive refinement network (RRN) captures features and predicts progressive refinements. Features across different granularities are integrated using a weight-sharing strategy, and velocity prediction is employed as an auxiliary task to further enhance performance. Comprehensive experimental results in EHT/UCY and Stanford Drone Dataset indicate that MGTraj outperforms baseline methods and achieves state-of-the-art performance among goal-guided methods.