OpenRaiser/Intern-Atlas huggingface dataset:
FedSelect-ME: A Secure Multi-Edge Federated Learning Framework with Adaptive Client Scoring
Venue: arXiv cs.CR 2025
Year: 2025

Federated Learning (FL) enables collaborative model training without sharing raw data but suffers from limited scalability, high communication costs, and privacy risks due to its centralized architecture. This paper proposes FedSelect-ME, a hierarchical multi-edge FL framework that enhances scalability, security, and energy efficiency. Multiple edge servers distribute workloads and perform score-based client selection, prioritizing participants based on utility, energy efficiency, and data sensitivity. Secure Aggregation with Homomorphic Encryption and Differential Privacy protects model updates from exposure and manipulation. Evaluated on the eICU healthcare dataset, FedSelect-ME achieves higher prediction accuracy, improved fairness across regions, and reduced communication overhead compared to FedAvg, FedProx, and FedSelect. The results demonstrate that the proposed framework effectively addresses the bottlenecks of conventional FL, offering a secure, scalable, and efficient solution for large-scale, privacy-sensitive healthcare applications.
Fibbinary-Based Compression and Quantization for Efficient Neural Radio Receivers
Venue: arXiv cs.IT 2025
Year: 2025

Neural receivers have shown outstanding performance compared to the conventional ones but this comes with a high network complexity leading to a heavy computational cost. This poses significant challenges in their deployment on hardware-constrained devices. To address the issue, this paper explores two optimization strategies: quantization and compression. We introduce both uniform and non-uniform quantization such as the Fibonacci Code word Quantization (FCQ). A novel fine-grained approach to the Incremental Network Quantization (INQ) strategy is then proposed to compensate for the losses introduced by the above mentioned quantization techniques. Additionally, we introduce two novel lossless compression algorithms that effectively reduce the memory size by compressing sequences of Fibonacci quantized parameters characterized by a huge redundancy. The quantization technique provides a saving of 45\% and 44\% in the multiplier's power and area, respectively, and its combination with the compression determines a 63.4\% reduction in memory footprint, while still providing higher performances than a conventional receiver.
Dynamic Population Distribution Aware Human Trajectory Generation with Diffusion Model
Venue: arXiv cs.LG 2025
Year: 2025

Human trajectory data is crucial in urban planning, traffic engineering, and public health. However, directly using real-world trajectory data often faces challenges such as privacy concerns, data acquisition costs, and data quality. A practical solution to these challenges is trajectory generation, a method developed to simulate human mobility behaviors. Existing trajectory generation methods mainly focus on capturing individual movement patterns but often overlook the influence of population distribution on trajectory generation. In reality, dynamic population distribution reflects changes in population density across different regions, significantly impacting individual mobility behavior. Thus, we propose a novel trajectory generation framework based on a diffusion model, which integrates the dynamic population distribution constraints to guide high-fidelity generation outcomes. Specifically, we construct a spatial graph to enhance the spatial correlation of trajectories. Then, we design a dynamic population distribution aware denoising network to capture the spatiotemporal dependencies of human mobility behavior as well as the impact of population distribution in the denoising process. Extensive experiments show that the trajectories generated by our model can resemble real-world trajectories in terms of some critical statistical metrics, outperforming state-of-the-art algorithms by over 54%.
Towards Defect Phase Diagrams: From Research Data Management to Automated Workflows
Venue: arXiv cs.DB 2025
Year: 2025

Defect phase diagrams provide a unified description of crystal defect states for materials design and are central to the scientific objectives of the Collaborative Research Centre (CRC) 1394. Their construction requires the systematic integration of heterogeneous experimental and simulation data across research groups and locations. In this setting, research data management (RDM) is a key enabler of new scientific insight by linking distributed research activities and making complex data reproducible and reusable. To address the challenge of heterogeneous data sources and formats, a comprehensive RDM infrastructure has been established that links experiment, data, and analysis in a seamless workflow. The system combines: (1) a joint electronic laboratory notebook and laboratory information management system, (2) easy-to-use large-object data storage, (3) automatic metadata extraction from heterogeneous and proprietary file formats, (4) interactive provenance graphs for data exploration and reuse, and (5) automated reporting and analysis workflows. The two key technological elements are the openBIS electronic laboratory notebook and laboratory information management system, and a newly developed companion application that extends openBIS with large-scale data handling, automated metadata capture, and federated access to distributed research data. This integrated approach reduces friction in data capture and curation, enabling traceable and reusable datasets that accelerate the construction of defect phase diagrams across institutions.
StrengthSense: A Dataset of IMU Signals Capturing Everyday Strength-Demanding Activities
Venue: arXiv cs.CV 2025
Year: 2025

Tracking strength-demanding activities with wearable sensors like IMUs is crucial for monitoring muscular strength, endurance, and power. However, there is a lack of comprehensive datasets capturing these activities. To fill this gap, we introduce \textit{StrengthSense}, an open dataset that encompasses IMU signals capturing 11 strength-demanding activities, such as sit-to-stand, climbing stairs, and mopping. For comparative purposes, the dataset also includes 2 non-strength demanding activities. The dataset was collected from 29 healthy subjects utilizing 10 IMUs placed on limbs and the torso, and was annotated using video recordings as references. This paper provides a comprehensive overview of the data collection, pre-processing, and technical validation. We conducted a comparative analysis between the joint angles estimated by IMUs and those directly extracted from video to verify the accuracy and reliability of the sensor data. Researchers and developers can utilize \textit{StrengthSense} to advance the development of human activity recognition algorithms, create fitness and health monitoring applications, and more.
GPoS: Geospatially-aware Proof of Stake
Venue: arXiv cs.DC 2025
Year: 2025

Geospatial decentralization is essential for blockchains, ensuring regulatory resilience, robustness, and fairness. We empirically analyze five major Proof of Stake (PoS) blockchains: Aptos, Avalanche, Ethereum, Solana, and Sui, revealing that a few geographic regions dominate consensus voting power, resulting in limited geospatial decentralization. To address this, we propose Geospatially aware Proof of Stake (GPoS), which integrates geospatial diversity with stake-based voting power. Experimental evaluation demonstrates an average 45% improvement in geospatial decentralization, as measured by the Gini coefficient of Eigenvector centrality, while incurring minimal performance overhead in BFT protocols, including HotStuff and CometBFT. These results demonstrate that GPoS can improve geospatial decentralization {while, in our experiments, incurring minimal overhead} to consensus performance.
LLM Probing with Contrastive Eigenproblems: Improving Understanding and Applicability of CCS
Venue: arXiv cs.LG 2025
Year: 2025

Contrast-Consistent Search (CCS) is an unsupervised probing method able to test whether large language models represent binary features, such as sentence truth, in their internal activations. While CCS has shown promise, its two-term objective has been only partially understood. In this work, we revisit CCS with the aim of clarifying its mechanisms and extending its applicability. We argue that what should be optimized for, is relative contrast consistency. Building on this insight, we reformulate CCS as an eigenproblem, yielding closed-form solutions with interpretable eigenvalues and natural extensions to multiple variables. We evaluate these approaches across a range of datasets, finding that they recover similar performance to CCS, while avoiding problems around sensitivity to random initialization. Our results suggest that relativizing contrast consistency not only improves our understanding of CCS but also opens pathways for broader probing and mechanistic interpretability methods.
Rethinking LLM Human Simulation: When a Graph is What You Need
Venue: arXiv cs.CL 2025
Year: 2025

Large language models (LLMs) are increasingly used to simulate humans, with applications ranging from survey prediction to decision-making. However, are LLMs strictly necessary, or can smaller, domain-grounded models suffice? We identify a large class of simulation problems in which individuals make choices among discrete options, where a graph neural network (GNN) can match or surpass strong LLM baselines despite being three orders of magnitude smaller. We introduce Graph-basEd Models for human Simulation (GEMS), which casts discrete choice simulation tasks as a link prediction problem on graphs, leveraging relational knowledge while incorporating language representations only when needed. Evaluations across three key settings on three simulation datasets show that GEMS achieves comparable or better accuracy than LLMs, with far greater efficiency, interpretability, and transparency, highlighting the promise of graph-based modeling as a lightweight alternative to LLMs for human simulation. Our code is available at https://github.com/schang-lab/gems.
MM-UNet: Morph Mamba U-shaped Convolutional Networks for Retinal Vessel Segmentation
Venue: arXiv cs.CV 2025
Year: 2025

Accurate detection of retinal vessels plays a critical role in reflecting a wide range of health status indicators in the clinical diagnosis of ocular diseases. Recently, advances in deep learning have led to a surge in retinal vessel segmentation methods, which have significantly contributed to the quantitative analysis of vascular morphology. However, retinal vasculature differs significantly from conventional segmentation targets in that it consists of extremely thin and branching structures, whose global morphology varies greatly across images. These characteristics continue to pose challenges to segmentation precision and robustness. To address these issues, we propose MM-UNet, a novel architecture tailored for efficient retinal vessel segmentation. The model incorporates Morph Mamba Convolution layers, which replace pointwise convolutions to enhance branching topological perception through morph, state-aware feature sampling. Additionally, Reverse Selective State Guidance modules integrate reverse guidance theory with state-space modeling to improve geometric boundary awareness and decoding efficiency. Extensive experiments conducted on two public retinal vessel segmentation datasets demonstrate the superior performance of the proposed method in segmentation accuracy. Compared to the existing approaches, MM-UNet achieves F1-score gains of 1.64 % on DRIVE and 1.25 % on STARE, demonstrating its effectiveness and advancement. The project code is public via https://github.com/liujiawen-jpg/MM-UNet.
Open the Oyster: Empirical Evaluation and Improvement of Code Reasoning Confidence in LLMs
Venue: arXiv cs.SE 2025
Year: 2025

With the widespread application of large language models (LLMs) in the field of code intelligence, increasing attention has been paid to the reliability and controllability of their outputs in code reasoning tasks. Confidence estimation serves as an effective and convenient approach for evaluating these aspects. This paper proposes a confidence analysis and enhancement framework for LLMs tailored to code reasoning tasks. We conduct a comprehensive empirical study on the confidence reliability of mainstream LLMs across different tasks, and further evaluate the effectiveness of techniques such as prompt strategy optimisation and mathematical calibration (e.g., Platt Scaling) in improving confidence reliability. Our results show that DeepSeek-Reasoner achieves the best performance across various tasks, outperforming other models by up to $0.680$, $0.636$, and $13.652$ in terms of ECE, Brier Score, and Performance Score, respectively. The hybrid strategy combining the reassess prompt strategy and Platt Scaling achieves improvements of up to $0.541$, $0.628$, and $15.084$ over the original performance in the aforementioned three metrics. These results indicate that models with reasoning capabilities demonstrate superior confidence reliability, and that the hybrid strategy is the most effective in enhancing the confidence reliability of various models. Meanwhile, we elucidate the impact of different task complexities, model scales, and strategies on confidence performance, and highlight that the confidence of current LLMs in complex reasoning tasks still has considerable room for improvement. This study not only provides a research foundation and technical reference for the application of confidence in LLM-assisted software engineering, but also points the way for future optimisation and engineering deployment of confidence mechanisms.
OmniField: Conditioned Neural Fields for Robust Multimodal Spatiotemporal Learning
Venue: arXiv cs.LG 2025
Year: 2025

Multimodal spatiotemporal learning on real-world experimental data is constrained by two challenges: within-modality measurements are sparse, irregular, and noisy (QA/QC artifacts) but cross-modally correlated; the set of available modalities varies across space and time, shrinking the usable record unless models can adapt to arbitrary subsets at train and test time. We propose OmniField, a continuity-aware framework that learns a continuous neural field conditioned on available modalities and iteratively fuses cross-modal context. A multimodal crosstalk block architecture paired with iterative cross-modal refinement aligns signals prior to the decoder, enabling unified reconstruction, interpolation, forecasting, and cross-modal prediction without gridding or surrogate preprocessing. Extensive evaluations show that OmniField consistently outperforms eight strong multimodal spatiotemporal baselines. Under heavy simulated sensor noise, performance remains close to clean-input levels, highlighting robustness to corrupted measurements.
A Multi-Fidelity Global Search Framework for Hotspot Prevention in 3D Thermal Design Space
Venue: arXiv cs.CE 2025
Year: 2025

We present a Bézier-based Multi-Fidelity Thermal Optimization Framework, which is a computationally efficient methodology for the global optimization of 3D heat sinks. The flexible Bézier-parameterized fin geometries and the adopted multi-fidelity pseudo-3D thermal modeling strategy meet at a balance between accuracy and computational cost. In this method, the smooth and compact Bézier representation of fins defines the design space from which diverse topologies can be generated with minimal design variables. A global optimizer, the Covariance Matrix Adaptation Evolution Strategy, minimizes the pressure drop with respect to a given surface-average temperature constraint to achieve improvement in the pressure loss. In the framework, the pseudo-3D model couples two thermally interacting 2D layers: a thermofluid layer representing the fluid domain passing through the fins, and a conductive base plate representing the surface where excessive average temperature is to be avoided. Both layers are coupled with calibrated heat transfer coefficients obtained from high-fidelity 3D simulations. For several fin geometries, the proposed framework has been validated by comparing the pseudo-3D results with those of full 3D simulations, which yielded good agreement in terms of temperature distribution and pressure drops when the computational cost was reduced by several orders of magnitude. Optimization results show that it attains up to 50\% pressure loss reduction compared to conventional straight-fin configurations, and it reveals a clear trade-off between thermal performance and hydraulic efficiency. Thus, the proposed method forms a new basis for fast, geometry-flexible, and optimized heat sink design, enabling efficient exploration of complex geometries.
Optimizing Multi-Lane Intersection Performance in Mixed Autonomy Environments
Venue: arXiv cs.MA 2025
Year: 2025

One of the main challenges in managing traffic at multilane intersections is ensuring smooth coordination between human-driven vehicles (HDVs) and connected autonomous vehicles (CAVs). This paper presents a novel traffic signal control framework that combines Graph Attention Networks (GAT) with Soft Actor-Critic (SAC) reinforcement learning to address this challenge. GATs are used to model the dynamic graph- structured nature of traffic flow to capture spatial and temporal dependencies between lanes and signal phases. The proposed SAC is a robust off-policy reinforcement learning algorithm that enables adaptive signal control through entropy-optimized decision making. This design allows the system to coordinate the signal timing and vehicle movement simultaneously with objectives focused on minimizing travel time, enhancing performance, ensuring safety, and improving fairness between HDVs and CAVs. The model is evaluated using a SUMO-based simulation of a four-way intersection and incorporating different traffic densities and CAV penetration rates. The experimental results demonstrate the effectiveness of the GAT-SAC approach by achieving a 24.1% reduction in average delay and up to 29.2% fewer traffic violations compared to traditional methods. Additionally, the fairness ratio between HDVs and CAVs improved to 1.59, indicating more equitable treatment across vehicle types. These findings suggest that the GAT-SAC framework holds significant promise for real-world deployment in mixed-autonomy traffic systems.
Deep Ideation: Designing LLM Agents to Generate Novel Research Ideas on Scientific Concept Network
Venue: arXiv cs.AI 2025
Year: 2025

Novel research ideas play a critical role in advancing scientific inquiries. Recent advancements in Large Language Models (LLMs) have demonstrated their potential to generate novel research ideas by leveraging large-scale scientific literature. However, previous work in research ideation has primarily relied on simplistic methods, such as keyword co-occurrence or semantic similarity. These approaches focus on identifying statistical associations in the literature but overlook the complex, contextual relationships between scientific concepts, which are essential to effectively leverage knowledge embedded in human literature. For instance, papers that simultaneously mention "keyword A" and "keyword B" often present research ideas that integrate both concepts. Additionally, some LLM-driven methods propose and refine research ideas using the model's internal knowledge, but they fail to effectively utilize the scientific concept network, limiting the grounding of ideas in established research. To address these challenges, we propose the Deep Ideation framework to address these challenges, integrating a scientific network that captures keyword co-occurrence and contextual relationships, enriching LLM-driven ideation. The framework introduces an explore-expand-evolve workflow to iteratively refine research ideas, using an Idea Stack to track progress. A critic engine, trained on real-world reviewer feedback, guides the process by providing continuous feedback on the novelty and feasibility of ideas. Our experiments show that our approach improves the quality of generated ideas by 10.67% compared to other methods, with ideas surpassing top conference acceptance levels. Human evaluation highlights their practical value in scientific research, and ablation studies confirm the effectiveness of each component in the workflow. Code repo is available at https://github.com/kyZhao-1/Deep-Ideation.
Demo: Statistically Significant Results On Biases and Errors of LLMs Do Not Guarantee Generalizable Results
Venue: arXiv cs.CL 2025
Year: 2025

Recent research has shown that hallucinations, omissions, and biases are prevalent in everyday use-cases of LLMs. However, chatbots used in medical contexts must provide consistent advice in situations where non-medical factors are involved, such as when demographic information is present. In order to understand the conditions under which medical chatbots fail to perform as expected, we develop an infrastructure that 1) automatically generates queries to probe LLMs and 2) evaluates answers to these queries using multiple LLM-as-a-judge setups and prompts. For 1), our prompt creation pipeline samples the space of patient demographics, histories, disorders, and writing styles to create realistic questions that we subsequently use to prompt LLMs. In 2), our evaluation pipeline provides hallucination and omission detection using LLM-as-a-judge as well as agentic workflows, in addition to LLM-as-a-judge treatment category detectors. As a baseline study, we perform two case studies on inter-LLM agreement and the impact of varying the answering and evaluation LLMs. We find that LLM annotators exhibit low agreement scores (average Cohen's Kappa $κ=0.118$), and only specific (answering, evaluation) LLM pairs yield statistically significant differences across writing styles, genders, and races. We recommend that studies using LLM evaluation use multiple LLMs as evaluators in order to avoid arriving at statistically significant but non-generalizable results, particularly in the absence of ground-truth data. We also suggest publishing inter-LLM agreement metrics for transparency. Our code and dataset are available here: https://github.com/BBN-E/medic-neurips-2025-demo.
VFocus: Better Verilog Generation from Large Language Model via Focused Reasoning
Venue: arXiv cs.AR 2025
Year: 2025

Large Language Models (LLMs) have shown impressive potential in generating Verilog codes, but ensuring functional correctness remains a challenge. Existing approaches often rely on self-consistency or simulation feedback to select the best candidate, but they miss opportunities to focus LLM reasoning on the most informative parts of the design. We propose VFocus, a three-stage framework that enhances Verilog generation by sharpening the focus of LLM reasoning onto critical decision points in the code generation process. In the \textbf{pre-ranking stage}, VFocus generates multiple code candidates through LLM prompting, retries for syntactically valid outputs, and introduces a \textit{Density-guided Filtering} to retain candidates that fall within the "reasoning sweet spot" for functional correctness. In the \textbf{ranking stage}, we simulate each code candidate using an automatically generated testbench and apply self-consistency-based clustering to identify the most consistent outputs. Finally, in the \textbf{post-ranking refinement stage}, VFocus performs inconsistency mining on top-ranked candidates and invokes reasoning-augmented LLM prompts for candidate refinement. Experiments on the VerilogEval-Human benchmark show that VFocus significantly improves the pass@1 correctness across multiple reasoning LLMs, demonstrating its effectiveness in enhancing Verilog generation for complex hardware design tasks.