OpenRaiser/Intern-Atlas huggingface dataset:
FathomGPT: A Natural Language Interface for Interactively Exploring Ocean Science Data
Venue: arXiv cs.HC 2024
Year: 2024

We introduce FathomGPT, an open source system for the interactive investigation of ocean science data via a natural language interface. FathomGPT was developed in close collaboration with marine scientists to enable researchers to explore and analyze the FathomNet image database. FathomGPT provides a custom information retrieval pipeline that leverages OpenAI's large language models to enable: the creation of complex queries to retrieve images, taxonomic information, and scientific measurements; mapping common names and morphological features to scientific names; generating interactive charts on demand; and searching by image or specified patterns within an image. In designing FathomGPT, particular emphasis was placed on enhancing the user's experience by facilitating free-form exploration and optimizing response times. We present an architectural overview and implementation details of FathomGPT, along with a series of ablation studies that demonstrate the effectiveness of our approach to name resolution, fine tuning, and prompt modification. We also present usage scenarios of interactive data exploration sessions and document feedback from ocean scientists and machine learning experts.
An Evolutionary Large Language Model for Hallucination Mitigation
Venue: arXiv cs.CL 2024
Year: 2024

The emergence of LLMs, like ChatGPT and Gemini, has marked the modern era of artificial intelligence applications characterized by high-impact applications generating text, images, and videos. However, these models usually ensue with one critical challenge called hallucination: confident presentation of inaccurate or fabricated information. This problem attracts serious concern when these models are applied to specialized domains, including healthcare and law, where the accuracy and preciseness of information are absolute conditions. In this paper, we propose EvoLLMs, an innovative framework inspired by Evolutionary Computation, which automates the generation of high-quality Question-answering (QA) datasets while minimizing hallucinations. EvoLLMs employs genetic algorithms, mimicking evolutionary processes like selection, variation, and mutation, to guide LLMs in generating accurate, contextually relevant question-answer pairs. Comparative analysis shows that EvoLLMs consistently outperforms human-generated datasets in key metrics such as Depth, Relevance, and Coverage, while nearly matching human performance in mitigating hallucinations. These results highlight EvoLLMs as a robust and efficient solution for QA dataset generation, significantly reducing the time and resources required for manual curation.
Flattering to Deceive: The Impact of Sycophantic Behavior on User Trust in Large Language Model
Venue: arXiv cs.AI 2024
Year: 2024

Sycophancy refers to the tendency of a large language model to align its outputs with the user's perceived preferences, beliefs, or opinions, in order to look favorable, regardless of whether those statements are factually correct. This behavior can lead to undesirable consequences, such as reinforcing discriminatory biases or amplifying misinformation. Given that sycophancy is often linked to human feedback training mechanisms, this study explores whether sycophantic tendencies negatively impact user trust in large language models or, conversely, whether users consider such behavior as favorable. To investigate this, we instructed one group of participants to answer ground-truth questions with the assistance of a GPT specifically designed to provide sycophantic responses, while another group used the standard version of ChatGPT. Initially, participants were required to use the language model, after which they were given the option to continue using it if they found it trustworthy and useful. Trust was measured through both demonstrated actions and self-reported perceptions. The findings consistently show that participants exposed to sycophantic behavior reported and exhibited lower levels of trust compared to those who interacted with the standard version of the model, despite the opportunity to verify the accuracy of the model's output.
Geographical Information Alignment Boosts Traffic Analysis via Transpose Cross-attention
Venue: arXiv cs.LG 2024
Year: 2024

Traffic accident prediction is crucial for enhancing road safety and mitigating congestion, and recent Graph Neural Networks (GNNs) have shown promise in modeling the inherent graph-based traffic data. However, existing GNN- based approaches often overlook or do not explicitly exploit geographic position information, which often plays a critical role in understanding spatial dependencies. This is also aligned with our observation, where accident locations are often highly relevant. To address this issue, we propose a plug-in-and-play module for common GNN frameworks, termed Geographic Information Alignment (GIA). This module can efficiently fuse the node feature and geographic position information through a novel Transpose Cross-attention mechanism. Due to the large number of nodes for traffic data, the conventional cross-attention mechanism performing the node-wise alignment may be infeasible in computation-limited resources. Instead, we take the transpose operation for Query, Key, and Value in the Cross-attention mechanism, which substantially reduces the computation cost while maintaining sufficient information. Experimental results for both traffic occurrence prediction and severity prediction (severity levels based on the interval of recorded crash counts) on large-scale city-wise datasets confirm the effectiveness of our proposed method. For example, our method can obtain gains ranging from 1.3% to 10.9% in F1 score and 0.3% to 4.8% in AUC.
Novel Magnetic Actuation Strategies for Precise Ferrofluid Marble Manipulation in Magnetic Digital Microfluidics: Position Control and Applications
Venue: arXiv cs.RO 2024
Year: 2024

Precise manipulation of liquid marbles has significant potential in various applications such as lab-on-a-chip systems, drug delivery, and biotechnology and has been a challenge for researchers. Ferrofluid marble (FM) is a marble with a ferrofluid core that can easily be manipulated by a magnetic field. Although FMs have great potential for accurate positioning and manipulation, these marbles have not been precisely controlled in magnetic digital microfluidics, so far. In this study for the first time, a novel method of magnetic actuation is proposed using a pair of Helmholtz coils and permanent magnets. The governing equations for controlling the FM position are investigated, and it is shown that there are three different strategies for adjusting the applied magnetic force. Then, experiments are conducted to demonstrate the capability of the proposed method. To this aim, different magnetic setups are proposed for manipulating FMs. These setups are compared in terms of energy consumption and tracking ability across various frequencies. The study showcases several applications of precise FM position control, including controllable reciprocal positioning, simultaneous position control of two FMs, the transport of non-magnetic liquid marbles using the FMs, and sample extraction method from the liquid core of the FM.
GoldFish: Serverless Actors with Short-Term Memory State for the Edge-Cloud Continuum
Venue: arXiv cs.DC 2024
Year: 2024

Serverless Computing is a computing paradigm that provides efficient infrastructure management and elastic scalability. Serverless functions scale up or down based on demand, which means that functions are not directly addressable and rely on platform-managed invocation. Serverless stateless nature requires functions to leverage external services, such as object storage and KVS, to exchange data. Serverless actors have emerged as a solution to these issues. However, the state-of-the-art serverless lifecycle and event-trigger invocation force actors to leverage remote services to manage their state and exchange data, which impacts the performance and incurs additional costs and dependency on third-party services. To address these issues, in this paper, we introduce a novel serverless lifecycle model that allows short-term stateful actors, enabling actors to maintain their state between executions. Additionally, we propose a novel serverless Invocation Model that enables serverless actors to influence the processing of future messages. We present GoldFish, a lightweight WebAssembly short-term stateful serverless actor platform that provides a novel serverless actor lifecycle and invocation model. GoldFish leverages WebAssembly to provide the actors with lightweight sandbox isolation, making them suitable for the Edge-Cloud Continuum, where computational resources are limited. Experimental results show that GoldFish optimizes the data exchange latency by up to 92% and increases the throughput by up to 10x compared to OpenFaaS and Spin.
Deep-Learning Based Docking Methods: Fair Comparisons to Conventional Docking Workflows
Venue: arXiv cs.AI 2024
Year: 2024

The diffusion learning method, DiffDock, for docking small-molecule ligands into protein binding sites was recently introduced. Results included comparisons to more conventional docking approaches, with DiffDock showing superior performance. Here, we employ a fully automatic workflow using the Surflex-Dock methods to generate a fair baseline for conventional docking approaches. Results were generated for the common and expected situation where a binding site location is known and also for the condition of an unknown binding site. For the known binding site condition, Surflex-Dock success rates at 2.0 Angstroms RMSD far exceeded those for DiffDock (Top-1/Top-5 success rates, respectively, were 68/81% compared with 45/51%). Glide performed with similar success rates (67/73%) to Surflex-Dock for the known binding site condition, and results for AutoDock Vina and Gnina followed this pattern. For the unknown binding site condition, using an automated method to identify multiple binding pockets, Surflex-Dock success rates again exceeded those of DiffDock, but by a somewhat lesser margin. DiffDock made use of roughly 17,000 co-crystal structures for learning (98% of PDBBind version 2020, pre-2019 structures) for a training set in order to predict on 363 test cases (2% of PDBBind 2020) from 2019 forward. DiffDock's performance was inextricably linked with the presence of near-neighbor cases of close to identical protein-ligand complexes in the training set for over half of the test set cases. DiffDock exhibited a 40 percentage point difference on near-neighbor cases (two-thirds of all test cases) compared with cases with no near-neighbor training case. DiffDock has apparently encoded a type of table-lookup during its learning process, rendering meaningful applications beyond its reach. Further, it does not perform even close to competitively with a competently run modern docking workflow.
EgoCast: Forecasting Egocentric Human Pose in the Wild
Venue: arXiv cs.CV 2024
Year: 2024

Accurately estimating and forecasting human body pose is important for enhancing the user's sense of immersion in Augmented Reality. Addressing this need, our paper introduces EgoCast, a bimodal method for 3D human pose forecasting using egocentric videos and proprioceptive data. We study the task of human pose forecasting in a realistic setting, extending the boundaries of temporal forecasting in dynamic scenes and building on the current framework for current pose estimation in the wild. We introduce a current-frame estimation module that generates pseudo-groundtruth poses for inference, eliminating the need for past groundtruth poses typically required by current methods during forecasting. Our experimental results on the recent Ego-Exo4D and Aria Digital Twin datasets validate EgoCast for real-life motion estimation. On the Ego-Exo4D Body Pose 2024 Challenge, our method significantly outperforms the state-of-the-art approaches, laying the groundwork for future research in human pose estimation and forecasting in unscripted activities with egocentric inputs.
PopSweeper: Automatically Detecting and Resolving App-Blocking Pop-Ups to Assist Automated Mobile GUI Testing
Venue: arXiv cs.SE 2024
Year: 2024

Graphical User Interfaces (GUIs) are the primary means by which users interact with mobile applications, making them crucial to both app functionality and user experience. However, a major challenge in automated testing is the frequent appearance of app-blocking pop-ups, such as ads or system alerts, which obscure critical UI elements and disrupt test execution, often requiring manual intervention. These interruptions lead to inaccurate test results, increased testing time, and reduced reliability, particularly for stakeholders conducting large-scale app testing. To address this issue, we introduce PopSweeper, a novel tool designed to detect and resolve app-blocking pop-ups in real-time during automated GUI testing. PopSweeper combines deep learning-based computer vision techniques for pop-up detection and close button localization, allowing it to autonomously identify pop-ups and ensure uninterrupted testing. We evaluated PopSweeper on over 72K app screenshots from the RICO dataset and 87 top-ranked mobile apps collected from app stores, manually identifying 832 app-blocking pop-ups. PopSweeper achieved 91.7% precision and 93.5% recall in pop-up classification and 93.9% BoxAP with 89.2% recall in close button detection. Furthermore, end-to-end evaluations demonstrated that PopSweeper successfully resolved blockages in 87.1% of apps with minimal overhead, achieving classification and close button detection within 60 milliseconds per frame. These results highlight PopSweeper's capability to enhance the accuracy and efficiency of automated GUI testing by mitigating pop-up interruptions.
Who Brings the Frisbee: Probing Hidden Hallucination Factors in Large Vision-Language Model via Causality Analysis
Venue: arXiv cs.CV 2024
Year: 2024

Recent advancements in large vision-language models (LVLM) have significantly enhanced their ability to comprehend visual inputs alongside natural language. However, a major challenge in their real-world application is hallucination, where LVLMs generate non-existent visual elements, eroding user trust. The underlying mechanism driving this multimodal hallucination is poorly understood. Minimal research has illuminated whether contexts such as sky, tree, or grass field involve the LVLM in hallucinating a frisbee. We hypothesize that hidden factors, such as objects, contexts, and semantic foreground-background structures, induce hallucination. This study proposes a novel causal approach: a hallucination probing system to identify these hidden factors. By analyzing the causality between images, text prompts, and network saliency, we systematically explore interventions to block these factors. Our experimental findings show that a straightforward technique based on our analysis can significantly reduce hallucinations. Additionally, our analyses indicate the potential to edit network internals to minimize hallucinated outputs.
Supporting Gig Worker Needs and Advancing Policy Through Worker-Centered Data-Sharing
Venue: arXiv cs.CY 2024
Year: 2024

The proliferating adoption of platform-based gig work increasingly raises concerns for worker conditions. Past studies documented how platforms leveraged design to exploit labor, withheld information to generate power asymmetries, and left workers alone to manage logistical overheads as well as social isolation. However, researchers also called attention to the potential of helping workers overcome such costs via worker-led datasharing, which can enable collective actions and mutual aid among workers, while offering advocates, lawmakers and regulatory bodies insights for improving work conditions. To understand stakeholders' desiderata for a data-sharing system (i.e. functionality and policy initiatives that it can serve), we interviewed 11 policy domain experts in the U.S. and conducted co-design workshops with 14 active gig workers across four domains. Our results outline policymakers' prioritized initiatives, information needs, and (mis)alignments with workers' concerns and desires around data collectives. We offer design recommendations for data-sharing systems that support worker needs while bringing us closer to legislation that promote more thriving and equitable gig work futures.
Progressive Vision-Language Prompt for Multi-Organ Multi-Class Cell Semantic Segmentation with Single Branch
Venue: arXiv cs.CV 2024
Year: 2024

Pathological cell semantic segmentation is a fundamental technology in computational pathology, essential for applications like cancer diagnosis and effective treatment. Given that multiple cell types exist across various organs, with subtle differences in cell size and shape, multi-organ, multi-class cell segmentation is particularly challenging. Most existing methods employ multi-branch frameworks to enhance feature extraction, but often result in complex architectures. Moreover, reliance on visual information limits performance in multi-class analysis due to intricate textural details. To address these challenges, we propose a Multi-OrgaN multi-Class cell semantic segmentation method with a single brancH (MONCH) that leverages vision-language input. Specifically, we design a hierarchical feature extraction mechanism to provide coarse-to-fine-grained features for segmenting cells of various shapes, including high-frequency, convolutional, and topological features. Inspired by the synergy of textual and multi-grained visual features, we introduce a progressive prompt decoder to harmonize multimodal information, integrating features from fine to coarse granularity for better context capture. Extensive experiments on the PanNuke dataset, which has significant class imbalance and subtle cell size and shape variations, demonstrate that MONCH outperforms state-of-the-art cell segmentation methods and vision-language models. Codes and implementations will be made publicly available.
Surveying the Effects of Quality, Diversity, and Complexity in Synthetic Data From Large Language Models
Venue: arXiv cs.LG 2024
Year: 2024

Synthetic data generation with Large Language Models is a promising paradigm for augmenting natural data over a nearly infinite range of tasks. Given this variety, direct comparisons among synthetic data generation algorithms are scarce, making it difficult to understand where improvement comes from and what bottlenecks exist. We propose to evaluate algorithms via the makeup of synthetic data generated by each algorithm in terms of data quality, diversity, and complexity. We choose these three characteristics for their significance in open-ended processes and the impact each has on the capabilities of downstream models. We find quality to be essential for in-distribution model generalization, diversity to be essential for out-of-distribution generalization, and complexity to be beneficial for both. Further, we emphasize the existence of Quality-Diversity trade-offs in training data and the downstream effects on model performance. We then examine the effect of various components in the synthetic data pipeline on each data characteristic. This examination allows us to taxonomize and compare synthetic data generation algorithms through the components they utilize and the resulting effects on data QDC composition. This analysis extends into a discussion on the importance of balancing QDC in synthetic data for efficient reinforcement learning and self-improvement algorithms. Analogous to the QD trade-offs in training data, often there exist trade-offs between model output quality and output diversity which impact the composition of synthetic data. We observe that many models are currently evaluated and optimized only for output quality, thereby limiting output diversity and the potential for self-improvement. We argue that balancing these trade-offs is essential to the development of future self-improvement algorithms and highlight a number of works making progress in this direction.
Benchmarking Attention Mechanisms and Consistency Regularization Semi-Supervised Learning for Post-Flood Building Damage Assessment in Satellite Images
Venue: arXiv cs.CV 2024
Year: 2024

Post-flood building damage assessment is critical for rapid response and post-disaster reconstruction planning. Current research fails to consider the distinct requirements of disaster assessment (DA) from change detection (CD) in neural network design. This paper focuses on two key differences: 1) building change features in DA satellite images are more subtle than in CD; 2) DA datasets face more severe data scarcity and label imbalance. To address these issues, in terms of model architecture, the research explores the benchmark performance of attention mechanisms in post-flood DA tasks and introduces Simple Prior Attention UNet (SPAUNet) to enhance the model's ability to recognize subtle changes, in terms of semi-supervised learning (SSL) strategies, the paper constructs four different combinations of image-level label category reference distributions for consistent training. Experimental results on flood events of xBD dataset show that SPAUNet performs exceptionally well in supervised learning experiments, achieving a recall of 79.10% and an F1 score of 71.32% for damaged classification, outperforming CD methods. The results indicate the necessity of DA task-oriented model design. SSL experiments demonstrate the positive impact of image-level consistency regularization on the model. Using pseudo-labels to form the reference distribution for consistency training yields the best results, proving the potential of using the category distribution of a large amount of unlabeled data for SSL. This paper clarifies the differences between DA and CD tasks. It preliminarily explores model design strategies utilizing prior attention mechanisms and image-level consistency regularization, establishing new post-flood DA task benchmark methods.
Unsupervised Network for Single Image Raindrop Removal
Venue: arXiv cs.CV 2024
Year: 2024

Image quality degradation caused by raindrops is one of the most important but challenging problems that reduce the performance of vision systems. Most existing raindrop removal algorithms are based on a supervised learning method using pairwise images, which are hard to obtain in real-world applications. This study proposes a deep neural network for raindrop removal based on unsupervised learning, which only requires two unpaired image sets with and without raindrops. Our proposed model performs layer separation based on cycle network architecture, which aims to separate a rainy image into a raindrop layer, a transparency mask, and a clean background layer. The clean background layer is the target raindrop removal result, while the transparency mask indicates the spatial locations of the raindrops. In addition, the proposed model applies a feedback mechanism to benefit layer separation by refining low-level representation with high-level information. i.e., the output of the previous iteration is used as input for the next iteration, together with the input image with raindrops. As a result, raindrops could be gradually removed through this feedback manner. Extensive experiments on raindrop benchmark datasets demonstrate the effectiveness of the proposed method on quantitative metrics and visual quality.