OpenRaiser/Intern-Atlas huggingface dataset:
VGGTFace: Topologically Consistent Facial Geometry Reconstruction in the Wild
Venue: arXiv cs.CV 2025
Year: 2025

Reconstructing topologically consistent facial geometry is crucial for the digital avatar creation pipelines. Existing methods either require tedious manual efforts, lack generalization to in-the-wild data, or are constrained by the limited expressiveness of 3D Morphable Models. To address these limitations, we propose VGGTFace, an automatic approach that innovatively applies the 3D foundation model, i.e. VGGT, for topologically consistent facial geometry reconstruction from in-the-wild multi-view images captured by everyday users. Our key insight is that, by leveraging VGGT, our method naturally inherits strong generalization ability and expressive power from its large-scale training and point map representation. However, it is unclear how to reconstruct a topologically consistent mesh from VGGT, as the topology information is missing in its prediction. To this end, we augment VGGT with Pixel3DMM for injecting topology information via pixel-aligned UV values. In this manner, we convert the pixel-aligned point map of VGGT to a point cloud with topology. Tailored to this point cloud with known topology, we propose a novel Topology-Aware Bundle Adjustment strategy to fuse them, where we construct a Laplacian energy for the Bundle Adjustment objective. Our method achieves high-quality reconstruction in 10 seconds for 16 views on a single NVIDIA RTX 4090. Experiments demonstrate state-of-the-art results on benchmarks and impressive generalization to in-the-wild data. Code is available at https://github.com/grignarder/vggtface.
3-colorable planar graphs have an intersection segment representation using 3 slopes
Venue: arXiv cs.DM 2025
Year: 2025

In his PhD Thesis, E.R. Scheinerman conjectured that planar graphs are intersection graphs of line segments in the plane. This conjecture was proved with two different approaches by J. Chalopin and the author, and by the author, L. Isenmann, and C. Pennarun. In the case of 3-colorable planar graphs E.R. Scheinerman conjectured that it is possible to restrict the set of slopes used by the segments to only 3 slopes. Here we prove this conjecture by using an approach introduced by S. Felsner to deal with contact representations of planar graphs with homothetic triangles.
MoRE: Batch-Robust Multi-Omics Representations from Frozen Pre-trained Transformers
Venue: arXiv cs.LG 2025
Year: 2025

Representation learning on multi-omics data is challenging due to extreme dimensionality, modality heterogeneity, and cohort-specific batch effects. While pre-trained transformer backbones have shown broad generalization capabilities in biological sequence modeling, their application to multi-omics integration remains underexplored. We present MoRE (Multi-Omics Representation Embedding), a framework that repurposes frozen pre-trained transformers to align heterogeneous assays into a shared latent space. Unlike purely generative approaches, MoRE employs a parameter-efficient fine-tuning (PEFT) strategy, prioritizing cross-sample and cross-modality alignment over simple sequence reconstruction. Specifically, MoRE attaches lightweight, modality-specific adapters and a task-adaptive fusion layer to the frozen backbone. It optimizes a masked modeling objective jointly with supervised contrastive and batch-invariant alignment losses, yielding structure-preserving embeddings that generalize across unseen cell types and platforms. We benchmark MoRE against established baselines, including scGPT, scVI, and Harmony with Scrublet, evaluating integration fidelity, rare population detection, and modality transfer. Our results demonstrate that MoRE achieves competitive batch robustness and biological conservation while significantly reducing trainable parameters compared to fully fine-tuned models. This work positions MoRE as a practical step toward general-purpose omics foundation models.
FREE: Uncertainty-Aware Autoregression for Parallel Diffusion Transformers
Venue: arXiv cs.CV 2025
Year: 2025

Diffusion Transformers (DiTs) achieve state-of-the-art generation quality but require long sequential denoising trajectories, leading to high inference latency. Recent speculative inference methods enable lossless parallel sampling in U-Net-based diffusion models via a drafter-verifier scheme, but their acceleration is limited on DiTs due to insufficient draft accuracy during verification. To address this limitation, we analyze the DiTs' feature dynamics and find the features of the final transformer layer (top-block) exhibit strong temporal consistency and rich semantic abstraction. Based on this insight, we propose FREE, a novel framework that employs a lightweight drafter to perform feature-level autoregression with parallel verification, guaranteeing lossless acceleration with theoretical and empirical support. Meanwhile, prediction variance (uncertainty) of DiTs naturally increases in later denoising steps, reducing acceptance rates under speculative sampling. To mitigate this effect, we further introduce an uncertainty-guided relaxation strategy, forming FREE (relax), which dynamically adjusts the acceptance probability in response to uncertainty levels. Experiments on ImageNet-$512^2$ show that FREE achieves up to $1.86 \times$ acceleration, and FREE (relax) further reaches $2.25 \times$ speedup while maintaining high perceptual and quantitative fidelity in generation quality.
The external rhythm of an actor in science: New indicators for the science of science
Venue: arXiv cs.DL 2025
Year: 2025

When calculating citation indicators, whether it is the total number of received citations or the average citations per paper, we always face the same problem. Namely, that papers published in different years have varying citation potential. Hence, strictly speaking, their citations cannot be compared. In a former study, we created a new indicator called the internal rhythm indicator of an actor. The internal rhythm indicator makes it possible to compare the citation performances among different publication years, but it is only valid within the actor based framework. In this study, we define, create, and explore the external rhythm of an actor, which is also a sequence of ratios of observed citations to expected citations. The essential difference between internal rhythm and external rhythm lies in the way they are created and hence in the point of view taken to study an actor. The former is created based on its own publication-citation matrix, while the latter is based on two publication-citation matrices. One is the same as the former. The other one is a publication-citation matrix of a collective, which includes the actor under study. The external rhythm of an actor is a citation-based indicator of research that can be used to compare not only the citation performance of an actor with that of the collective the actor is part of, but also to compare two or more actors within the same collective. We further propose a summary average of ratios indicator.
StableTrack: Stabilizing Multi-Object Tracking on Low-Frequency Detections
Venue: arXiv cs.CV 2025
Year: 2025

Multi-object tracking (MOT) is one of the most challenging tasks in computer vision, where it is important to correctly detect objects and associate these detections across frames. Current approaches mainly focus on tracking objects in each frame of a video stream, making it almost impossible to run the model under conditions of limited computing resources. To address this issue, we propose StableTrack, a novel approach that stabilizes the quality of tracking on low-frequency detections. Our method introduces a new two-stage matching strategy to improve the cross-frame association between low-frequency detections. We propose a novel Bbox-Based Distance instead of the conventional Mahalanobis distance, which allows us to effectively match objects using the Re-ID model. Furthermore, we integrate visual tracking into the Kalman Filter and the overall tracking pipeline. Our method outperforms current state-of-the-art trackers in the case of low-frequency detections, achieving $\textit{11.6%}$ HOTA improvement at $\textit{1}$ Hz on MOT17-val, while keeping up with the best approaches on the standard MOT17, MOT20, and DanceTrack benchmarks with full-frequency detections.
BRIC: Bridging Kinematic Plans and Physical Control at Test Time
Venue: arXiv cs.CV 2025
Year: 2025

We propose BRIC, a novel test-time adaptation (TTA) framework that enables long-term human motion generation by resolving execution discrepancies between diffusion-based kinematic motion planners and reinforcement learning-based physics controllers. While diffusion models can generate diverse and expressive motions conditioned on text and scene context, they often produce physically implausible outputs, leading to execution drift during simulation. To address this, BRIC dynamically adapts the physics controller to noisy motion plans at test time, while preserving pre-trained skills via a loss function that mitigates catastrophic forgetting. In addition, BRIC introduces a lightweight test-time guidance mechanism that steers the diffusion model in the signal space without updating its parameters. By combining both adaptation strategies, BRIC ensures consistent and physically plausible long-term executions across diverse environments in an effective and efficient manner. We validate the effectiveness of BRIC on a variety of long-term tasks, including motion composition, obstacle avoidance, and human-scene interaction, achieving state-of-the-art performance across all tasks.
Diffusion for Fusion: Designing Stellarators with Generative AI
Venue: arXiv cs.LG 2025
Year: 2025

Stellarators are a prospective class of fusion-based power plants that confine a hot plasma with three-dimensional magnetic fields. Typically framed as a PDE-constrained optimization problem, stellarator design is a time-consuming process that can take hours to solve on a computing cluster. Developing fast methods for designing stellarators is crucial for advancing fusion research. Given the recent development of large datasets of optimized stellarators, machine learning approaches have emerged as a potential candidate. Motivated by this, we present an open inverse problem to the machine learning community: to rapidly generate high-quality stellarator designs which have a set of desirable characteristics. As a case study in the problem space, we train a conditional diffusion model on data from the QUASR database to generate quasisymmetric stellarator designs with desirable characteristics (aspect ratio and mean rotational transform). The diffusion model is applied to design stellarators with characteristics not seen during training. We provide evaluation protocols and show that many of the generated stellarators exhibit solid performance: less than 5% deviation from quasisymmetry and the target characteristics. The modest deviation from quasisymmetry highlights an opportunity to reach the sub 1% target. Beyond the case study, we share multiple promising avenues for generative modeling to advance stellarator design.
Look Where It Matters: Training-Free Ultra-HR Remote Sensing VQA via Adaptive Zoom Search
Venue: arXiv cs.CV 2025
Year: 2025

With advances in satellite constellations, sensor technologies, and imaging pipelines, ultra-high-resolution (Ultra-HR) remote sensing imagery is becoming increasingly widespread. However, current remote sensing foundation models are ill-suited to such inputs: full-image encoding exhausts token and memory budgets, while resize-based preprocessing loses fine-grained and answer-critical details. In this context, guiding the model look where it matters before prediction becomes crucial. Therefore, we present ZoomSearch, a training-free, plug-and-play pipeline that decouples 'where to look' from 'how to answer' for Ultra-HR Remote Sensing Visual Question Answering (RS-VQA). ZoomSearch combines Adaptive Multi-Branch Zoom Search, which performs a hierarchical search over image patches to localize query-relevant regions, with Layout-Aware Patch Reassembly, which reorganizes the selected patches into a compact, layout-faithful canvas. We conduct comprehensive experiments on Ultra-HR RS-VQA benchmarks MME-RealWorld-RS and LRS-VQA, comparing against (i) strong general foundation models, (ii) remote sensing foundation models, (iii) Ultra-HR RS-VQA methods, and (iv) plug-and-play search-based VQA methods. When integrated with LLaVA-ov, ZoomSearch attains state-of-the-art accuracy across diverse tasks, improving the LLaVA-ov baseline by 26.3% on LRS-VQA and 114.8% on MME-RealWorld-RS. Meanwhile, it achieves much higher inference efficiency, outperforming prior search-based methods by 20%~44% in speed.
Efficient and Fast Generative-Based Singing Voice Separation using a Latent Diffusion Model
Venue: arXiv cs.SD 2025
Year: 2025

Extracting individual elements from music mixtures is a valuable tool for music production and practice. While neural networks optimized to mask or transform mixture spectrograms into the individual source(s) have been the leading approach, the source overlap and correlation in music signals poses an inherent challenge. Also, accessing all sources in the mixture is crucial to train these systems, while complicated. Attempts to address these challenges in a generative fashion exist, however, the separation performance and inference efficiency remain limited. In this work, we study the potential of diffusion models to advance toward bridging this gap, focusing on generative singing voice separation relying only on corresponding pairs of isolated vocals and mixtures for training. To align with creative workflows, we leverage latent diffusion: the system generates samples encoded in a compact latent space, and subsequently decodes these into audio. This enables efficient optimization and faster inference. Our system is trained using only open data. We outperform existing generative separation systems, and level the compared non-generative systems on a list of signal quality measures and on interference removal. We provide a noise robustness study on the latent encoder, providing insights on its potential for the task. We release a modular toolkit for further research on the topic.
Ranking-Enhanced Anomaly Detection Using Active Learning-Assisted Attention Adversarial Dual AutoEncoders
Venue: arXiv cs.LG 2025
Year: 2025

Advanced Persistent Threats (APTs) pose a significant challenge in cybersecurity due to their stealthy and long-term nature. Modern supervised learning methods require extensive labeled data, which is often scarce in real-world cybersecurity environments. In this paper, we propose an innovative approach that leverages AutoEncoders for unsupervised anomaly detection, augmented by active learning to iteratively improve the detection of APT anomalies. By selectively querying an oracle for labels on uncertain or ambiguous samples, we minimize labeling costs while improving detection rates, enabling the model to improve its detection accuracy with minimal data while reducing the need for extensive manual labeling. We provide a detailed formulation of the proposed Attention Adversarial Dual AutoEncoder-based anomaly detection framework and show how the active learning loop iteratively enhances the model. The framework is evaluated on real-world imbalanced provenance trace databases produced by the DARPA Transparent Computing program, where APT-like attacks constitute as little as 0.004\% of the data. The datasets span multiple operating systems, including Android, Linux, BSD, and Windows, and cover two attack scenarios. The results have shown significant improvements in detection rates during active learning and better performance compared to other existing approaches.
From One Attack Domain to Another: Contrastive Transfer Learning with Siamese Networks for APT Detection
Venue: arXiv cs.LG 2025
Year: 2025

Advanced Persistent Threats (APT) pose a major cybersecurity challenge due to their stealth, persistence, and adaptability. Traditional machine learning detectors struggle with class imbalance, high dimensional features, and scarce real world traces. They often lack transferability-performing well in the training domain but degrading in novel attack scenarios. We propose a hybrid transfer framework that integrates Transfer Learning, Explainable AI (XAI), contrastive learning, and Siamese networks to improve cross-domain generalization. An attention-based autoencoder supports knowledge transfer across domains, while Shapley Additive exPlanations (SHAP) select stable, informative features to reduce dimensionality and computational cost. A Siamese encoder trained with a contrastive objective aligns source and target representations, increasing anomaly separability and mitigating feature drift. We evaluate on real-world traces from the DARPA Transparent Computing (TC) program and augment with synthetic attack scenarios to test robustness. Across source to target transfers, the approach delivers improved detection scores with classical and deep baselines, demonstrating a scalable, explainable, and transferable solution for APT detection.
Assessing LLMs' Performance: Insights from the Chinese Pharmacist Exam
Venue: arXiv cs.AI 2025
Year: 2025

Background: As large language models (LLMs) become increasingly integrated into digital health education and assessment workflows, their capabilities in supporting high-stakes, domain-specific certification tasks remain underexplored.In China, the national pharmacist licensure exam serves as a standardized benchmark for evaluating pharmacists' clinical and theoretical competencies. Objective: This study aimed to compare the performance of two LLMs: ChatGPT-4o and DeepSeek-R1 on real questions from the Chinese Pharmacist Licensing Examination (2017-2021), and to discuss the implications of these performance differences for AI-enabled formative evaluation. Methods: A total of 2,306 multiple-choice (text-only) questions were compiled from official exams, training materials, and public databases. Questions containing tables or images were excluded. Each item was input in its original Chinese format, and model responses were evaluated for exact accuracy. Pearson's Chi-squared test was used to compare overall performance, and Fisher's exact test was applied to year-wise multiple-choice accuracy. Results: DeepSeek-R1 outperformed ChatGPT-4o with a significantly higher overall accuracy (90.0% vs. 76.1%, p < 0.001). Unit-level analyses revealed consistent advantages for DeepSeek-R1, particularly in foundational and clinical synthesis modules. While year-by-year multiple-choice performance also favored DeepSeek-R1, this performance gap did not reach statistical significance in any specific unit-year (all p > 0.05). Conclusion: DeepSeek-R1 demonstrated robust alignment with the structural and semantic demands of the pharmacist licensure exam. These findings suggest that domain-specific models warrant further investigation for this context, while also reinforcing the necessity of human oversight in legally and ethically sensitive contexts.
Beyond Generation: Multi-Hop Reasoning for Factual Accuracy in Vision-Language Models
Venue: arXiv cs.AI 2025
Year: 2025

Visual Language Models (VLMs) are powerful generative tools but often produce factually inaccurate outputs due to a lack of robust reasoning capabilities. While extensive research has been conducted on integrating external knowledge for reasoning in large language models (LLMs), such efforts remain underexplored in VLMs, where the challenge is compounded by the need to bridge multiple modalities seamlessly. This work introduces a framework for knowledge-guided reasoning in VLMs, leveraging structured knowledge graphs for multi-hop verification using image-captioning task to illustrate our framework. Our approach enables systematic reasoning across multiple steps, including visual entity recognition, knowledge graph traversal, and fact-based caption refinement. We evaluate the framework using hierarchical, triple-based and bullet-point based knowledge representations, analyzing their effectiveness in factual accuracy and logical inference. Empirical results show that our approach improves factual accuracy by approximately 31% on preliminary experiments on a curated dataset of mixtures from Google Landmarks v2, Conceptual captions and Coco captions revealing key insights into reasoning patterns and failure modes. This work demonstrates the potential of integrating external knowledge for advancing reasoning in VLMs, paving the way for more reliable and knowledgable multimodal systems.
Engel p-adic Isogeny-based Cryptography over Laurent Series: Foundations, Security, and an ESP32 Implementation
Venue: arXiv cs.CR 2025
Year: 2025

Securing the Internet of Things (IoT) against quantum attacks requires public-key cryptography that (i) remains compact and (ii) runs efficiently on microcontrollers, capabilities many post-quantum (PQ) schemes lack due to large keys and heavy arithmetic. We address both constraints simultaneously with, to our knowledge, the first-ever isogeny framework that encodes super-singular elliptic-curve isogeny data via novel Engel expansions over the p-adic Laurent series. Engel coefficients compress torsion information, thereby addressing the compactness constraint, yielding public keys of ~1.1 - 16.9 kbits preserving the hallmark small sizes of isogeny systems. Engel arithmetic is local and admits fixed-precision p-adic operations, enabling micro-controller efficiency with low-memory, branch-regular kernels suitable for embedded targets.
Bridging the Language Gap: Synthetic Voice Diversity via Latent Mixup for Equitable Speech Recognition
Venue: arXiv cs.CL 2025
Year: 2025

Modern machine learning models for audio tasks often exhibit superior performance on English and other well-resourced languages, primarily due to the abundance of available training data. This disparity leads to an unfair performance gap for low-resource languages, where data collection is both challenging and costly. In this work, we introduce a novel data augmentation technique for speech corpora designed to mitigate this gap. Through comprehensive experiments, we demonstrate that our method significantly improves the performance of automatic speech recognition systems on low-resource languages. Furthermore, we show that our approach outperforms existing augmentation strategies, offering a practical solution for enhancing speech technology in underrepresented linguistic communities.
A Tale of Two Geometries: Adaptive Optimizers and Non-Euclidean Descent
Venue: arXiv cs.LG 2025
Year: 2025

Adaptive optimizers can reduce to normalized steepest descent (NSD) when only adapting to the current gradient, suggesting a close connection between the two algorithmic families. A key distinction between their analyses, however, lies in the geometries, e.g., smoothness notions, they rely on. In the convex setting, adaptive optimizers are governed by a stronger adaptive smoothness condition, while NSD relies on the standard notion of smoothness. We extend the theory of adaptive smoothness to the nonconvex setting and show that it precisely characterizes the convergence of adaptive optimizers. Moreover, we establish that adaptive smoothness enables acceleration of adaptive optimizers with Nesterov momentum in the convex setting, a guarantee unattainable under standard smoothness for certain non-Euclidean geometry. We further develop an analogous comparison for stochastic optimization by introducing adaptive gradient variance, which parallels adaptive smoothness and leads to dimension-free convergence guarantees that cannot be achieved under standard gradient variance for certain non-Euclidean geometry.