OpenRaiser/Intern-Atlas huggingface dataset:
MCP-AI: Protocol-Driven Intelligence Framework for Autonomous Reasoning in Healthcare
Venue: arXiv cs.AI 2025
Year: 2025

Healthcare AI systems have historically faced challenges in merging contextual reasoning, long-term state management, and human-verifiable workflows into a cohesive framework. This paper introduces a completely innovative architecture and concept: combining the Model Context Protocol (MCP) with a specific clinical application, known as MCP-AI. This integration allows intelligent agents to reason over extended periods, collaborate securely, and adhere to authentic clinical logic, representing a significant shift away from traditional Clinical Decision Support Systems (CDSS) and prompt-based Large Language Models (LLMs). As healthcare systems become more complex, the need for autonomous, context-aware clinical reasoning frameworks has become urgent. We present MCP-AI, a novel architecture for explainable medical decision-making built upon the Model Context Protocol (MCP) a modular, executable specification for orchestrating generative and descriptive AI agents in real-time workflows. Each MCP file captures clinical objectives, patient context, reasoning state, and task logic, forming a reusable and auditable memory object. Unlike conventional CDSS or stateless prompt-based AI systems, MCP-AI supports adaptive, longitudinal, and collaborative reasoning across care settings. MCP-AI is validated through two use cases: (1) diagnostic modeling of Fragile X Syndrome with comorbid depression, and (2) remote coordination for Type 2 Diabetes and hypertension. In either scenario, the protocol facilitates physician-in-the-loop validation, streamlines clinical processes, and guarantees secure transitions of AI responsibilities between healthcare providers. The system connects with HL7/FHIR interfaces and adheres to regulatory standards, such as HIPAA and FDA SaMD guidelines. MCP-AI provides a scalable basis for interpretable, composable, and safety-oriented AI within upcoming clinical environments.
ShaRP: SHAllow-LayeR Pruning for Video Large Language Models Acceleration
Venue: arXiv cs.CV 2025
Year: 2025

Video Large Language Models (VLLMs) face the challenge of high computational load during the pre-filling stage due to the processing of an enormous number of visual tokens. Although attention-based pruning methods are widely used to accelerate inference, trials at early decoder layers often result in significant performance degradation, especially under high compression rates. We argue that while attention-based pruning inherently holds the potential to identify the most relevant visual tokens, its effectiveness in shallow decoder layers is limited by factors such as positional encoding bias and insufficient information interaction. In this paper, we propose an improved attention-based pruning framework, termed ShaRP, that integrates segment-aware causal masking, positional debiasing, and token deduplication for enhanced token selection. It enables effective pruning at shallow layers while maintaining stable performance under high compression rates without retraining. Extensive experiments demonstrate that ShaRP achieves competitive performance across multiple video understanding benchmarks, establishing a new paradigm for accelerating VLLM inference.
RevoNAD: Reflective Evolutionary Exploration for Neural Architecture Design
Venue: arXiv cs.LG 2025
Year: 2025

Recent progress in leveraging large language models (LLMs) has enabled Neural Architecture Design (NAD) systems to generate new architecture not limited from manually predefined search space. Nevertheless, LLM-driven generation remains challenging: the token-level design loop is discrete and non-differentiable, preventing feedback from smoothly guiding architectural improvement. These methods, in turn, commonly suffer from mode collapse into redundant structures or drift toward infeasible designs when constructive reasoning is not well grounded. We introduce RevoNAD, a reflective evolutionary orchestrator that effectively bridges LLM-based reasoning with feedback-aligned architectural search. First, RevoNAD presents a Multi-round Multi-expert Consensus to transfer isolated design rules into meaningful architectural clues. Then, Adaptive Reflective Exploration adjusts the degree of exploration leveraging reward variance; it explores when feedback is uncertain and refines when stability is reached. Finally, Pareto-guided Evolutionary Selection effectively promotes architectures that jointly optimize accuracy, efficiency, latency, confidence, and structural diversity. Across CIFAR10, CIFAR100, ImageNet16-120, COCO-5K, and Cityscape, RevoNAD achieves state-of-the-art performance. Ablation and transfer studies further validate the effectiveness of RevoNAD in allowing practically reliable, and deployable neural architecture design.
ParaUni: Enhance Generation in Unified Multimodal Model with Reinforcement-driven Hierarchical Parallel Information Interaction
Venue: arXiv cs.CV 2025
Year: 2025

Unified multimodal models significantly improve visual generation by combining vision-language models (VLMs) with diffusion models. However, existing methods struggle to fully balance sufficient interaction and flexible implementation due to vast representation difference. Considering abundant and hierarchical information in VLM's layers from low-level details to high-level semantics, we propose \textbf{ParaUni}. It extracts features from variants VLM's layers in a \textbf{Para}llel way for comprehensive information interaction and retains a flexible separation architecture to enhance generation in \textbf{Uni}fied multimodal model. Concretely, visual features from all VLM's layers are fed in parallel into a Layer Integration Module (LIM), which efficiently integrates fine-grained details and semantic abstractions and provides the fused representation as a condition to the diffusion model. To further enhance performance, we reveal that these hierarchical layers respond unequally to different rewards in Reinforcement Learning (RL). Crucially, we design a Layer-wise Dynamic Adjustment Mechanism (LDAM) to facilitate multiple reward improvements that aligns the hierarchical properties of these layers using RL. Extensive experiments show ParaUni leverages complementary multi-layer features to substantially improve generation quality and shows strong potential for multiple reward advances during RL stages. Code is available at https://github.com/JosephTiTan/ParaUni.
Spatiotemporal Tubes for Differential Drive Robots with Model Uncertainty
Venue: arXiv cs.RO 2025
Year: 2025

This paper presents a Spatiotemporal Tube (STT)-based control framework for differential-drive mobile robots with dynamic uncertainties and external disturbances, guaranteeing the satisfaction of Temporal Reach-Avoid-Stay (T-RAS) specifications. The approach employs circular STT, characterized by smoothly time-varying center and radius, to define dynamic safe corridors that guide the robot from the start region to the goal while avoiding obstacles. In particular, we first develop a sampling-based synthesis algorithm to construct a feasible STT that satisfies the prescribed timing and safety constraints with formal guarantees. To ensure that the robot remains confined within this tube, we then design analytically a closed-form, approximation-free control law. The resulting controller is computationally efficient, robust to disturbances and {model uncertainties}, and requires no model approximations or online optimization. The proposed framework is validated through simulation studies on a differential-drive robot and benchmarked against state-of-the-art methods, demonstrating superior robustness, accuracy, and computational efficiency.
A Hybrid Approach for EMF Code Generation:Code Templates Meet Large Language Models
Venue: arXiv cs.SE 2025
Year: 2025

Template-based and LLM-based code generation are both key enablers of automated software development. The former provides correctness guarantees but are rigid for complex requirements, whereas LLMs offer high flexibility at the risk of producing faulty code.This paper proposes iEcoreGen, a hybrid approach that integrates Eclipse Modeling Framework (EMF) and LLMs. In EMF, an Ecore model defines a system structure and acts as a blueprint for code-generation.iEcoreGen decomposes requirements to derive operation specifications, uses EMF's template-based generator to produce initial Java code, and serializes specifications into docstrings. LLMs are then invoked to complete and fix unimplemented methods. We assessed iEcoreGen on twenty code-generation tasks across five LLMs. It surpasses LLM-only baselines on pass@k and performs on par with them on compilation@k. An ablation study clarified the contribution of each component of iEcoreGen. Overall, the findings indicate that LLM-enhanced model-driven development is a promising path toward more efficient software automation.
SEA-SafeguardBench: Evaluating AI Safety in SEA Languages and Cultures
Venue: arXiv cs.CL 2025
Year: 2025

Safeguard models help large language models (LLMs) detect and block harmful content, but most evaluations remain English-centric and overlook linguistic and cultural diversity. Existing multilingual safety benchmarks often rely on machine-translated English data, which fails to capture nuances in low-resource languages. Southeast Asian (SEA) languages are underrepresented despite the region's linguistic diversity and unique safety concerns, from culturally sensitive political speech to region-specific misinformation. Addressing these gaps requires benchmarks that are natively authored to reflect local norms and harm scenarios. We introduce SEA-SafeguardBench, the first human-verified safety benchmark for SEA, covering eight languages, 21,640 samples, across three subsets: general, in-the-wild, and content generation. The experimental results from our benchmark demonstrate that even state-of-the-art LLMs and guardrails are challenged by SEA cultural and harm scenarios and underperform when compared to English texts.
DashFusion: Dual-stream Alignment with Hierarchical Bottleneck Fusion for Multimodal Sentiment Analysis
Venue: arXiv cs.CV 2025
Year: 2025

Multimodal sentiment analysis (MSA) integrates various modalities, such as text, image, and audio, to provide a more comprehensive understanding of sentiment. However, effective MSA is challenged by alignment and fusion issues. Alignment requires synchronizing both temporal and semantic information across modalities, while fusion involves integrating these aligned features into a unified representation. Existing methods often address alignment or fusion in isolation, leading to limitations in performance and efficiency. To tackle these issues, we propose a novel framework called Dual-stream Alignment with Hierarchical Bottleneck Fusion (DashFusion). Firstly, dual-stream alignment module synchronizes multimodal features through temporal and semantic alignment. Temporal alignment employs cross-modal attention to establish frame-level correspondences among multimodal sequences. Semantic alignment ensures consistency across the feature space through contrastive learning. Secondly, supervised contrastive learning leverages label information to refine the modality features. Finally, hierarchical bottleneck fusion progressively integrates multimodal information through compressed bottleneck tokens, which achieves a balance between performance and computational efficiency. We evaluate DashFusion on three datasets: CMU-MOSI, CMU-MOSEI, and CH-SIMS. Experimental results demonstrate that DashFusion achieves state-of-the-art performance across various metrics, and ablation studies confirm the effectiveness of our alignment and fusion techniques. The codes for our experiments are available at https://github.com/ultramarineX/DashFusion.
Poodle: Seamlessly Scaling Down Large Language Models with Just-in-Time Model Replacement
Venue: arXiv cs.DB 2025
Year: 2025

Businesses increasingly rely on large language models (LLMs) to automate simple repetitive tasks instead of developing custom machine learning models. LLMs require few, if any, training examples and can be utilized by users without expertise in model development. However, this comes at the cost of substantially higher resource and energy consumption compared to smaller models, which often achieve similar predictive performance for simple tasks. In this paper, we present our vision for just-in-time model replacement (JITR), where, upon identifying a recurring task in calls to an LLM, the model is replaced transparently with a cheaper alternative that performs well for this specific task. JITR retains the ease of use and low development effort of LLMs, while saving significant cost and energy. We discuss the main challenges in realizing our vision regarding the identification of recurring tasks and the creation of a custom model. Specifically, we argue that model search and transfer learning will play a crucial role in JITR to efficiently identify and fine-tune models for a recurring task. Using our JITR prototype Poodle, we achieve significant savings for exemplary tasks.
Credal and Interval Deep Evidential Classifications
Venue: arXiv cs.LG 2025
Year: 2025

Uncertainty Quantification (UQ) presents a pivotal challenge in the field of Artificial Intelligence (AI), profoundly impacting decision-making, risk assessment and model reliability. In this paper, we introduce Credal and Interval Deep Evidential Classifications (CDEC and IDEC, respectively) as novel approaches to address UQ in classification tasks. CDEC and IDEC leverage a credal set (closed and convex set of probabilities) and an interval of evidential predictive distributions, respectively, allowing us to avoid overfitting to the training data and to systematically assess both epistemic (reducible) and aleatoric (irreducible) uncertainties. When those surpass acceptable thresholds, CDEC and IDEC have the capability to abstain from classification and flag an excess of epistemic or aleatoric uncertainty, as relevant. Conversely, within acceptable uncertainty bounds, CDEC and IDEC provide a collection of labels with robust probabilistic guarantees. CDEC and IDEC are trained using standard backpropagation and a loss function that draws from the theory of evidence. They overcome the shortcomings of previous efforts, and extend the current evidential deep learning literature. Through extensive experiments on MNIST, CIFAR-10 and CIFAR-100, together with their natural OoD shifts (F-MNIST/K-MNIST, SVHN/Intel, TinyImageNet), we show that CDEC and IDEC achieve competitive predictive accuracy, state-of-the-art OoD detection under epistemic and total uncertainty, and tight, well-calibrated prediction regions that expand reliably under distribution shift. An ablation over ensemble size further demonstrates that CDEC attains stable uncertainty estimates with only a small ensemble.
MIND: Multi-rationale INtegrated Discriminative Reasoning Framework for Multi-modal Large Models
Venue: arXiv cs.AI 2025
Year: 2025

Recently, multimodal large language models (MLLMs) have been widely applied to reasoning tasks. However, they suffer from limited multi-rationale semantic modeling, insufficient logical robustness, and are susceptible to misleading interpretations in complex scenarios. Therefore, we propose a Multi-rationale INtegrated Discriminative (MIND) reasoning framework, which is designed to endow MLLMs with human-like cognitive abilities of "Understand -> Rethink -> Correct", and achieves a paradigm evolution from passive imitation-based reasoning to active discriminative reasoning. Specifically, we introduce a Rationale Augmentation and Discrimination (RAD) paradigm, which automatically and efficiently expands existing datasets by generating diverse rationales, providing a unified and extensible data foundation. Meanwhile, we design a Progressive Two-stage Correction Learning (P2CL) strategy. The first phase enhances multi-rationale positive learning, while the second phase enables active logic discrimination and correction. In addition, to mitigate representation entanglement in the multi-rationale semantic space, we propose a Multi-rationale Contrastive Alignment (MCA) optimization strategy, which achieves semantic aggregation of correct reasoning and boundary separation of incorrect reasoning. Extensive experiments demonstrate that the proposed MIND reasoning framework achieves state-of-the-art (SOTA) performance on multiple public datasets covering scientific, commonsense, and mathematical scenarios. It provides a new perspective for advancing MLLMs towards higher levels of cognitive intelligence. Our code is available at https://github.com/YuChuang1205/MIND
RoBoN: Routed Online Best-of-n for Test-Time Scaling with Multiple LLMs
Venue: arXiv cs.LG 2025
Year: 2025

Best-of-$n$ is a widely used test-time scaling approach for LLM inference. Yet despite evidence that LLMs exhibit complementary strengths across tasks, traditionally best-of-$n$ relies on a single model to generate responses. We propose RoBoN (Routed Online Best-of-$n$), a sequential multi-LLM alternative to the prevailing single-model best-of-$n$. Given a suite of models $\{m_i\}_{i=1}^M$, RoBoN sequentially routes generations one-by-one across models, based on scores computed using a reward model and an agreement signal on the predicted responses. This online routing requires no additional training, keeps compute parity, and works with any plug-in reward model. Across reasoning benchmarks (MATH500, OlympiadBench, MinervaMath, GSM8K, MMLU), RoBoN consistently outperforms standard best-of-$n$ applied to each individual model for larger $n$, with gains of up to 3.4\% in absolute accuracy, and also improves over a uniform multi-model portfolio baseline. Our results indicate that diversity across models can be exploited at inference to improve best-of-$n$ performance over any constituent model alone, providing a simple, training-free path to test-time scaling with multiple LLMs.
Automated Code Review Assignments: An Alternative Perspective of Code Ownership on GitHub
Venue: arXiv cs.SE 2025
Year: 2025

Code ownership is central to ensuring accountability and maintaining quality in large-scale software development. Yet, as external threats such as software supply chain attacks on project health and quality assurance increase, mechanisms for assigning and enforcing responsibility have become increasingly critical. In 2017, GitHub introduced the CODEOWNERS feature, which automatically designates reviewers for specific files to strengthen accountability and protect critical parts of the codebase. Despite its potential, little is known about how CODEOWNERS is actually adopted and practiced. We present the first large-scale empirical study of CODEOWNERS usage across over 844,000 pull requests with 1.9 million comments and over 2 million reviews. We identify 10,287 code owners to track their review activities. Results indicate that codeowners tend to adhere the rules specified in the CODEOWNERS file, exhibit similar collaborative behaviours to traditional metrics of ownership, but tend to contribute to a smoother and faster PR workflow over time. Finally, using regression discontinuity design (RDD) analysis, we find that repositories adopting CODEOWNERS experience shifts in review dynamics, as ownership redistributes review responsibilities away from core developers. Our results position CODEOWNERS as a promising yet underutilized mechanism for improving software governance and resilience. We discuss how projects can leverage this alternative ownership method as a perspective to enhance security, accountability, and workflow efficiency in open-source development.
ProPhy: Progressive Physical Alignment for Dynamic World Simulation
Venue: arXiv cs.CV 2025
Year: 2025

Recent advances in video generation have shown remarkable potential for constructing world simulators. However, current models still struggle to produce physically consistent results, particularly when handling large-scale or complex dynamics. This limitation arises primarily because existing approaches respond isotropically to physical prompts and neglect the fine-grained alignment between generated content and localized physical cues. To address these challenges, we propose ProPhy, a Progressive Physical Alignment Framework that enables explicit physics-aware conditioning and anisotropic generation. ProPhy employs a two-stage Mixture-of-Physics-Experts (MoPE) mechanism for discriminative physical prior extraction, where Semantic Experts infer semantic-level physical principles from textual descriptions, and Refinement Experts capture token-level physical dynamics. This mechanism allows the model to learn fine-grained, physics-aware video representations that better reflect underlying physical laws. Furthermore, we introduce a physical alignment strategy that transfers the physical reasoning capabilities of vision-language models (VLMs) into the Refinement Experts, facilitating a more accurate representation of dynamic physical phenomena. Extensive experiments on physics-aware video generation benchmarks demonstrate that ProPhy produces more realistic, dynamic, and physically coherent results than existing state-of-the-art methods.
CureAgent: A Training-Free Executor-Analyst Framework for Clinical Reasoning
Venue: arXiv cs.AI 2025
Year: 2025

Current clinical agent built on small LLMs, such as TxAgent suffer from a \textit{Context Utilization Failure}, where models successfully retrieve biomedical evidence due to supervised finetuning but fail to ground their diagnosis in that information. In this work, we propose the Executor-Analyst Framework, a modular architecture that decouples the syntactic precision of tool execution from the semantic robustness of clinical reasoning. By orchestrating specialized TxAgents (Executors) with long-context foundation models (Analysts), we mitigate the reasoning deficits observed in monolithic models. Beyond simple modularity, we demonstrate that a Stratified Ensemble strategy significantly outperforms global pooling by preserving evidentiary diversity, effectively addressing the information bottleneck. Furthermore, our stress tests reveal critical scaling insights: (1) a \textit{Context-Performance Paradox}, where extending reasoning contexts beyond 12k tokens introduces noise that degrades accuracy; and (2) the \textit{Curse of Dimensionality} in action spaces, where expanding toolsets necessitates hierarchical retrieval strategies. Crucially, our approach underscores the potential of training-free architectural engineering, achieving state-of-the-art performance on CURE-Bench without the need for expensive end-to-end finetuning. This provides a scalable, agile foundation for the next generation of trustworthy AI-driven therapeutics. Code has been released on https://github.com/June01/CureAgent.