OpenRaiser/Intern-Atlas huggingface dataset:
ChatEval: Towards Better LLM-based Evaluators through Multi-Agent Debate
Venue: arXiv cs.CL 2023
Year: 2023

Text evaluation has historically posed significant challenges, often demanding substantial labor and time cost. With the emergence of large language models (LLMs), researchers have explored LLMs' potential as alternatives for human evaluation. While these single-agent-based approaches show promise, experimental results suggest that further advancements are needed to bridge the gap between their current effectiveness and human-level evaluation quality. Recognizing that best practices of human evaluation processes often involve multiple human annotators collaborating in the evaluation, we resort to a multi-agent debate framework, moving beyond single-agent prompting strategies. The multi-agent-based approach enables a group of LLMs to synergize with an array of intelligent counterparts, harnessing their distinct capabilities and expertise to enhance efficiency and effectiveness in handling intricate tasks. In this paper, we construct a multi-agent referee team called ChatEval to autonomously discuss and evaluate the quality of generated responses from different models on open-ended questions and traditional natural language generation (NLG) tasks. Our analysis shows that ChatEval transcends mere textual scoring, offering a human-mimicking evaluation process for reliable assessments. Our code is available at https://github.com/chanchimin/ChatEval.
UniWorld: Autonomous Driving Pre-training via World Models
Venue: arXiv cs.CV 2023
Year: 2023

In this paper, we draw inspiration from Alberto Elfes' pioneering work in 1989, where he introduced the concept of the occupancy grid as World Models for robots. We imbue the robot with a spatial-temporal world model, termed UniWorld, to perceive its surroundings and predict the future behavior of other participants. UniWorld involves initially predicting 4D geometric occupancy as the World Models for foundational stage and subsequently fine-tuning on downstream tasks. UniWorld can estimate missing information concerning the world state and predict plausible future states of the world. Besides, UniWorld's pre-training process is label-free, enabling the utilization of massive amounts of image-LiDAR pairs to build a Foundational Model.The proposed unified pre-training framework demonstrates promising results in key tasks such as motion prediction, multi-camera 3D object detection, and surrounding semantic scene completion. When compared to monocular pre-training methods on the nuScenes dataset, UniWorld shows a significant improvement of about 1.5% in IoU for motion prediction, 2.0% in mAP and 2.0% in NDS for multi-camera 3D object detection, as well as a 3% increase in mIoU for surrounding semantic scene completion. By adopting our unified pre-training method, a 25% reduction in 3D training annotation costs can be achieved, offering significant practical value for the implementation of real-world autonomous driving. Codes are publicly available at https://github.com/chaytonmin/UniWorld.
The Devil is in the Errors: Leveraging Large Language Models for Fine-grained Machine Translation Evaluation
Venue: arXiv cs.CL 2023
Year: 2023

Automatic evaluation of machine translation (MT) is a critical tool driving the rapid iterative development of MT systems. While considerable progress has been made on estimating a single scalar quality score, current metrics lack the informativeness of more detailed schemes that annotate individual errors, such as Multidimensional Quality Metrics (MQM). In this paper, we help fill this gap by proposing AutoMQM, a prompting technique which leverages the reasoning and in-context learning capabilities of large language models (LLMs) and asks them to identify and categorize errors in translations. We start by evaluating recent LLMs, such as PaLM and PaLM-2, through simple score prediction prompting, and we study the impact of labeled data through in-context learning and finetuning. We then evaluate AutoMQM with PaLM-2 models, and we find that it improves performance compared to just prompting for scores (with particularly large gains for larger models) while providing interpretability through error spans that align with human annotations.
Why Not? Explaining Missing Entailments with Evee (Technical Report)
Venue: arXiv cs.AI 2023
Year: 2023

Understanding logical entailments derived by a description logic reasoner is not always straight-forward for ontology users. For this reason, various methods for explaining entailments using justifications and proofs have been developed and implemented as plug-ins for the ontology editor Protégé. However, when the user expects a missing consequence to hold, it is equally important to explain why it does not follow from the ontology. In this paper, we describe a new version of $\rm E{\scriptsize VEE}$, a Protégé plugin that now also provides explanations for missing consequences, via existing and new techniques based on abduction and counterexamples.
MSLE: An ontology for Materials Science Laboratory Equipment. Large-Scale Devices for Materials Characterization
Venue: arXiv cs.AI 2023
Year: 2023

This paper introduces a new ontology for Materials Science Laboratory Equipment, termed MSLE. A fundamental issue with materials science laboratory (hereafter lab) equipment in the real world is that scientists work with various types of equipment with multiple specifications. For example, there are many electron microscopes with different parameters in chemical and physical labs. A critical development to unify the description is to build an equipment domain ontology as basic semantic knowledge and to guide the user to work with the equipment appropriately. Here, we propose to develop a consistent ontology for equipment, the MSLE ontology. In the MSLE, two main existing ontologies, the Semantic Sensor Network (SSN) and the Material Vocabulary (MatVoc), have been integrated into the MSLE core to build a coherent ontology. Since various acronyms and terms have been used for equipment, this paper proposes an approach to use a Simple Knowledge Organization System (SKOS) to represent the hierarchical structure of equipment terms. Equipment terms were collected in various languages and abbreviations and coded into the MSLE using the SKOS model. The ontology development was conducted in close collaboration with domain experts and focused on the large-scale devices for materials characterization available in our research group. Competency questions are expected to be addressed through the MSLE ontology. Constraints are modeled in the Shapes Query Language (SHACL); a prototype is shown and validated to show the value of the modeling constraints.
Computational reproducibility of Jupyter notebooks from biomedical publications
Venue: arXiv cs.DL 2023
Year: 2023

Jupyter notebooks facilitate the bundling of executable code with its documentation and output in one interactive environment, and they represent a popular mechanism to document and share computational workflows. The reproducibility of computational aspects of research is a key component of scientific reproducibility but has not yet been assessed at scale for Jupyter notebooks associated with biomedical publications. We address computational reproducibility at two levels: First, using fully automated workflows, we analyzed the computational reproducibility of Jupyter notebooks related to publications indexed in PubMed Central. We identified such notebooks by mining the articles full text, locating them on GitHub and re-running them in an environment as close to the original as possible. We documented reproduction success and exceptions and explored relationships between notebook reproducibility and variables related to the notebooks or publications. Second, this study represents a reproducibility attempt in and of itself, using essentially the same methodology twice on PubMed Central over two years. Out of 27271 notebooks from 2660 GitHub repositories associated with 3467 articles, 22578 notebooks were written in Python, including 15817 that had their dependencies declared in standard requirement files and that we attempted to re-run automatically. For 10388 of these, all declared dependencies could be installed successfully, and we re-ran them to assess reproducibility. Of these, 1203 notebooks ran through without any errors, including 879 that produced results identical to those reported in the original notebook and 324 for which our results differed from the originally reported ones. Running the other notebooks resulted in exceptions. We zoom in on common problems, highlight trends and discuss potential improvements to Jupyter-related workflows associated with biomedical publications.
Bayesian Physics-Informed Neural Network for the Forward and Inverse Simulation of Engineered Nano-particles Mobility in a Contaminated Aquifer
Venue: arXiv cs.LG 2023
Year: 2023

Globally, there are many polluted groundwater sites that need an active remediation plan for the restoration of local ecosystem and environment. Engineered nanoparticles (ENPs) have proven to be an effective reactive agent for the in-situ degradation of pollutants in groundwater. While the performance of these ENPs has been highly promising on the laboratory scale, their application in real field case conditions is still limited. The complex transport and retention mechanisms of ENPs hinder the development of an efficient remediation strategy. Therefore, a predictive tool to comprehend the transport and retention behavior of ENPs is highly required. The existing tools in the literature are dominated with numerical simulators, which have limited flexibility and accuracy in the presence of sparse datasets and the aquifer heterogeneity. This work uses a Bayesian Physics-Informed Neural Network (B-PINN) framework to model the nano-particles mobility within an aquifer. The result from the forward model demonstrates the effective capability of B-PINN in accurately predicting the ENPs mobility and quantifying the uncertainty. The inverse model output is then used to predict the governing parameters for the ENPs mobility in a small-scale aquifer. The research demonstrates the capability of the tool to provide predictive insights for developing an efficient groundwater remediation strategy.
Improving ICD-based semantic similarity by accounting for varying degrees of comorbidity
Venue: arXiv cs.LG 2023
Year: 2023

Finding similar patients is a common objective in precision medicine, facilitating treatment outcome assessment and clinical decision support. Choosing widely-available patient features and appropriate mathematical methods for similarity calculations is crucial. International Statistical Classification of Diseases and Related Health Problems (ICD) codes are used worldwide to encode diseases and are available for nearly all patients. Aggregated as sets consisting of primary and secondary diagnoses they can display a degree of comorbidity and reveal comorbidity patterns. It is possible to compute the similarity of patients based on their ICD codes by using semantic similarity algorithms. These algorithms have been traditionally evaluated using a single-term expert rated data set. However, real-word patient data often display varying degrees of documented comorbidities that might impair algorithm performance. To account for this, we present a scale term that considers documented comorbidity-variance. In this work, we compared the performance of 80 combinations of established algorithms in terms of semantic similarity based on ICD-code sets. The sets have been extracted from patients with a C25.X (pancreatic cancer) primary diagnosis and provide a variety of different combinations of ICD-codes. Using our scale term we yielded the best results with a combination of level-based information content, Leacock & Chodorow concept similarity and bipartite graph matching for the set similarities reaching a correlation of 0.75 with our expert's ground truth. Our results highlight the importance of accounting for comorbidity variance while demonstrating how well current semantic similarity algorithms perform.
The Performance of Transferability Metrics does not Translate to Medical Tasks
Venue: arXiv cs.CV 2023
Year: 2023

Transfer learning boosts the performance of medical image analysis by enabling deep learning (DL) on small datasets through the knowledge acquired from large ones. As the number of DL architectures explodes, exhaustively attempting all candidates becomes unfeasible, motivating cheaper alternatives for choosing them. Transferability scoring methods emerge as an enticing solution, allowing to efficiently calculate a score that correlates with the architecture accuracy on any target dataset. However, since transferability scores have not been evaluated on medical datasets, their use in this context remains uncertain, preventing them from benefiting practitioners. We fill that gap in this work, thoroughly evaluating seven transferability scores in three medical applications, including out-of-distribution scenarios. Despite promising results in general-purpose datasets, our results show that no transferability score can reliably and consistently estimate target performance in medical contexts, inviting further work in that direction.
Open-set Face Recognition using Ensembles trained on Clustered Data
Venue: arXiv cs.CV 2023
Year: 2023

Open-set face recognition describes a scenario where unknown subjects, unseen during the training stage, appear on test time. Not only it requires methods that accurately identify individuals of interest, but also demands approaches that effectively deal with unfamiliar faces. This work details a scalable open-set face identification approach to galleries composed of hundreds and thousands of subjects. It is composed of clustering and an ensemble of binary learning algorithms that estimates when query face samples belong to the face gallery and then retrieves their correct identity. The approach selects the most suitable gallery subjects and uses the ensemble to improve prediction performance. We carry out experiments on well-known LFW and YTF benchmarks. Results show that competitive performance can be achieved even when targeting scalability.
Omega-Regular Reward Machines
Venue: arXiv cs.LG 2023
Year: 2023

Reinforcement learning (RL) is a powerful approach for training agents to perform tasks, but designing an appropriate reward mechanism is critical to its success. However, in many cases, the complexity of the learning objectives goes beyond the capabilities of the Markovian assumption, necessitating a more sophisticated reward mechanism. Reward machines and omega-regular languages are two formalisms used to express non-Markovian rewards for quantitative and qualitative objectives, respectively. This paper introduces omega-regular reward machines, which integrate reward machines with omega-regular languages to enable an expressive and effective reward mechanism for RL. We present a model-free RL algorithm to compute epsilon-optimal strategies against omega-egular reward machines and evaluate the effectiveness of the proposed algorithm through experiments.
Approximations for the Steiner Multicycle Problem
Venue: arXiv cs.DS 2023
Year: 2023

The Steiner Multicycle problem consists of, given a complete graph, a weight function on its vertices, and a collection of pairwise disjoint non-unitary sets called terminal sets, finding a minimum weight collection of vertex-disjoint cycles in the graph such that, for every terminal set, all of its vertices are in a same cycle of the collection. This problem generalizes the Traveling Salesman problem and therefore is hard to approximate in general. On the practical side, it models a collaborative less-than-truckload problem with pickup and delivery locations. Using an algorithm for the Survivable Network Design problem and T -joins, we obtain a 3-approximation for the metric case, improving on the previous best 4-approximation. Furthermore, we present an (11/9)-approximation for the particular case of the Steiner Multicycle in which each edge weight is 1 or 2. This algorithm can be adapted to obtain a (7/6)-approximation when every terminal set contains at least 4 vertices. Finally, we devise an O(lg n)-approximation algorithm for the asymmetric version of the problem.
Open Medical Gesture: An Open-Source Experiment in Naturalistic Physical Interactions for Mixed and Virtual Reality Simulations
Venue: arXiv cs.HC 2023
Year: 2023

Mixed Reality (MR) and Virtual Reality (VR) simulations are hampered by requirements for hand controllers or attempts to perseverate in use of two-dimensional computer interface paradigms from the 1980s. From our efforts to produce more naturalistic interactions for combat medic training for the military, USC has developed an open-source toolkit that enables direct hand controlled responsive interactions that is sensor independent and can function with depth sensing cameras, webcams or sensory gloves. Natural approaches we have examined include the ability to manipulate virtual smart objects in a similar manner to how they are used in the real world. From this research and review of current literature, we have discerned several best approaches for hand-based human computer interactions which provide intuitive, responsive, useful, and low frustration experiences for VR users.
SOTASTREAM: A Streaming Approach to Machine Translation Training
Venue: arXiv cs.CL 2023
Year: 2023

Many machine translation toolkits make use of a data preparation step wherein raw data is transformed into a tensor format that can be used directly by the trainer. This preparation step is increasingly at odds with modern research and development practices because this process produces a static, unchangeable version of the training data, making common training-time needs difficult (e.g., subword sampling), time-consuming (preprocessing with large data can take days), expensive (e.g., disk space), and cumbersome (managing experiment combinatorics). We propose an alternative approach that separates the generation of data from the consumption of that data. In this approach, there is no separate pre-processing step; data generation produces an infinite stream of permutations of the raw training data, which the trainer tensorizes and batches as it is consumed. Additionally, this data stream can be manipulated by a set of user-definable operators that provide on-the-fly modifications, such as data normalization, augmentation or filtering. We release an open-source toolkit, SOTASTREAM, that implements this approach: https://github.com/marian-nmt/sotastream. We show that it cuts training time, adds flexibility, reduces experiment management complexity, and reduces disk space, all without affecting the accuracy of the trained models.
Detecting The Corruption Of Online Questionnaires By Artificial Intelligence
Venue: arXiv cs.HC 2023
Year: 2023

Online questionnaires that use crowd-sourcing platforms to recruit participants have become commonplace, due to their ease of use and low costs. Artificial Intelligence (AI) based Large Language Models (LLM) have made it easy for bad actors to automatically fill in online forms, including generating meaningful text for open-ended tasks. These technological advances threaten the data quality for studies that use online questionnaires. This study tested if text generated by an AI for the purpose of an online study can be detected by both humans and automatic AI detection systems. While humans were able to correctly identify authorship of text above chance level (76 percent accuracy), their performance was still below what would be required to ensure satisfactory data quality. Researchers currently have to rely on the disinterest of bad actors to successfully use open-ended responses as a useful tool for ensuring data quality. Automatic AI detection systems are currently completely unusable. If AIs become too prevalent in submitting responses then the costs associated with detecting fraudulent submissions will outweigh the benefits of online questionnaires. Individual attention checks will no longer be a sufficient tool to ensure good data quality. This problem can only be systematically addressed by crowd-sourcing platforms. They cannot rely on automatic AI detection systems and it is unclear how they can ensure data quality for their paying clients.
ICAFusion: Iterative Cross-Attention Guided Feature Fusion for Multispectral Object Detection
Venue: arXiv cs.CV 2023
Year: 2023

Effective feature fusion of multispectral images plays a crucial role in multi-spectral object detection. Previous studies have demonstrated the effectiveness of feature fusion using convolutional neural networks, but these methods are sensitive to image misalignment due to the inherent deffciency in local-range feature interaction resulting in the performance degradation. To address this issue, a novel feature fusion framework of dual cross-attention transformers is proposed to model global feature interaction and capture complementary information across modalities simultaneously. This framework enhances the discriminability of object features through the query-guided cross-attention mechanism, leading to improved performance. However, stacking multiple transformer blocks for feature enhancement incurs a large number of parameters and high spatial complexity. To handle this, inspired by the human process of reviewing knowledge, an iterative interaction mechanism is proposed to share parameters among block-wise multimodal transformers, reducing model complexity and computation cost. The proposed method is general and effective to be integrated into different detection frameworks and used with different backbones. Experimental results on KAIST, FLIR, and VEDAI datasets show that the proposed method achieves superior performance and faster inference, making it suitable for various practical scenarios. Code will be available at https://github.com/chanchanchan97/ICAFusion.
ADD: An Automatic Desensitization Fisheye Dataset for Autonomous Driving
Venue: arXiv cs.CV 2023
Year: 2023

Autonomous driving systems require many images for analyzing the surrounding environment. However, there is fewer data protection for private information among these captured images, such as pedestrian faces or vehicle license plates, which has become a significant issue. In this paper, in response to the call for data security laws and regulations and based on the advantages of large Field of View(FoV) of the fisheye camera, we build the first Autopilot Desensitization Dataset, called ADD, and formulate the first deep-learning-based image desensitization framework, to promote the study of image desensitization in autonomous driving scenarios. The compiled dataset consists of 650K images, including different face and vehicle license plate information captured by the surround-view fisheye camera. It covers various autonomous driving scenarios, including diverse facial characteristics and license plate colors. Then, we propose an efficient multitask desensitization network called DesCenterNet as a benchmark on the ADD dataset, which can perform face and vehicle license plate detection and desensitization tasks. Based on ADD, we further provide an evaluation criterion for desensitization performance, and extensive comparison experiments have verified the effectiveness and superiority of our method on image desensitization.