OpenRaiser/Intern-Atlas huggingface dataset:
When "Correct" Is Not Safe: Can We Trust Functionally Correct Patches Generated by Code Agents?
Venue: arXiv cs.CR 2025
Year: 2025

Code agents are increasingly trusted to autonomously fix bugs on platforms such as GitHub, yet their security evaluation focuses almost exclusively on functional correctness. In this paper, we reveal a novel type of threat to real-world code agents: Functionally Correct yet Vulnerable (FCV) patches, which pass all test cases but contain vulnerable code. With our proposed FCV-Attack, which can be deliberately crafted by malicious attackers or implicitly introduced by benign developers, we show that SOTA LLMs (e.g., ChatGPT and Claude) and agent scaffolds (e.g., SWE-agent and OpenHands) are all vulnerable to this FCV threat; across 12 agent-model combinations on SWE-Bench, the attack only requires black-box access and a single query to the code agent to perform the attack. For example, for CWE-538 (information exposure vulnerability), the FCV-Attack attains an attack success rate of $40.7\%$ on GPT-5 Mini + OpenHands. Our results reveal an important security threat overlooked by current evaluation paradigms and urge the development of security-aware defenses for code agents.
A Survey of Recursive and Recurrent Neural Networks
Venue: arXiv cs.NE 2025
Year: 2025

In this paper, the branches of recursive and recurrent neural networks are classified in detail according to the network structure, training objective function and learning algorithm implementation. They are roughly divided into three categories: The first category is General Recursive and Recurrent Neural Networks, including Basic Recursive and Recurrent Neural Networks, Long Short Term Memory Recursive and Recurrent Neural Networks, Convolutional Recursive and Recurrent Neural Networks, Differential Recursive and Recurrent Neural Networks, One-Layer Recursive and Recurrent Neural Networks, High-Order Recursive and Recurrent Neural Networks, Highway Networks, Multidimensional Recursive and Recurrent Neural Networks, Bidirectional Recursive and Recurrent Neural Networks; the second category is Structured Recursive and Recurrent Neural Networks, including Grid Recursive and Recurrent Neural Networks, Graph Recursive and Recurrent Neural Networks, Temporal Recursive and Recurrent Neural Networks, Lattice Recursive and Recurrent Neural Networks, Hierarchical Recursive and Recurrent Neural Networks, Tree Recursive and Recurrent Neural Networks; the third category is Other Recursive and Recurrent Neural Networks, including Array Long Short Term Memory, Nested and Stacked Recursive and Recurrent Neural Networks, Memory Recursive and Recurrent Neural Networks. Various networks cross each other and even rely on each other to form a complex network of relationships. In the context of the development and convergence of various networks, many complex sequence, speech and image problems are solved. After a detailed description of the principle and structure of the above model and model deformation, the research progress and application of each model are described, and finally the recursive and recurrent neural network models are prospected and summarized.
From Flows to Words: Can Zero-/Few-Shot LLMs Detect Network Intrusions? A Grammar-Constrained, Calibrated Evaluation on UNSW-NB15
Venue: arXiv cs.CR 2025
Year: 2025

Large Language Models (LLMs) can reason over natural-language inputs, but their role in intrusion detection without fine-tuning remains uncertain. This study evaluates a prompt-only approach on UNSW-NB15 by converting each network flow to a compact textual record and augmenting it with lightweight, domain-inspired boolean flags (asymmetry, burst rate, TTL irregularities, timer anomalies, rare service/state, short bursts). To reduce output drift and support measurement, the model is constrained to produce structured, grammar-valid responses, and a single decision threshold is calibrated on a small development split. We compare zero-shot, instruction-guided, and few-shot prompting to strong tabular and neural baselines under identical splits, reporting accuracy, precision, recall, F1, and macro scores. Empirically, unguided prompting is unreliable, while instructions plus flags substantially improve detection quality; adding calibrated scoring further stabilizes results. On a balanced subset of two hundred flows, a 7B instruction-tuned model with flags reaches macro-F1 near 0.78; a lighter 3B model with few-shot cues and calibration attains F1 near 0.68 on one thousand examples. As the evaluation set grows to two thousand flows, decision quality decreases, revealing sensitivity to coverage and prompting. Tabular baselines remain more stable and faster, yet the prompt-only pipeline requires no gradient training, produces readable artifacts, and adapts easily through instructions and flags. Contributions include a flow-to-text protocol with interpretable cues, a calibration method for thresholding, a systematic baseline comparison, and a reproducibility bundle with prompts, grammar, metrics, and figures.
Automated Algorithm Design for Auto-Tuning Optimizers
Venue: arXiv cs.LG 2025
Year: 2025

Automatic performance tuning (auto-tuning) is essential for optimizing high-performance applications, where vast and irregular parameter spaces make manual exploration infeasible. Traditionally, auto-tuning relies on well-established optimization algorithms such as evolutionary algorithms, annealing methods, or surrogate model-based optimizers to efficiently find near-optimal configurations. However, designing effective optimizers remains challenging, as no single method performs best across all tuning tasks. In this work, we explore a new paradigm: using large language models (LLMs) to automatically generate optimization algorithms tailored to auto-tuning problems. We introduce a framework that prompts LLMs with problem descriptions and search-space characteristics results to produce specialized optimization strategies, which are iteratively examined and improved. These generated algorithms are evaluated on four real-world auto-tuning applications across six hardware platforms and compared against the state-of-the-art in optimization algorithms of two contemporary auto-tuning frameworks. The evaluation demonstrates that providing additional application- and search space-specific information in the generation stage results in an average performance improvement of 30.7\% and 14.6\%, respectively. In addition, our results show that LLM-generated optimizers can rival, and in various cases outperform, existing human-designed algorithms, with our best-performing generated optimization algorithms achieving, on average, 72.4\% improvement over state-of-the-art optimizers for auto-tuning.
EvoSyn: Generalizable Evolutionary Data Synthesis for Verifiable Learning
Venue: arXiv cs.LG 2025
Year: 2025

Reliable verifiable data has become a key driver of capability gains in modern language models, enabling stable reinforcement learning with verifiable rewards and effective distillation that transfers competence across math, coding, and agentic tasks. Yet constructing generalizable synthetic verifiable data remains difficult due to hallucination-prone generation, and weak or trivial verification artifacts that fail to separate strong from weak solutions. Existing approaches often rely on task-specific heuristics or post-hoc filters that do not transfer across domains and lack a principled, universal evaluator of verifiability. In this work, we introduce an evolutionary, task-agnostic, strategy-guided, executably-checkable data synthesis framework that, from minimal seed supervision, jointly synthesizes problems, diverse candidate solutions, and verification artifacts, and iteratively discovers strategies via a consistency-based evaluator that enforces agreement between human-annotated and strategy-induced checks. This pipeline upgrades filtering into principled synthesis: it reliably assembles coherent, verifiable training instances and generalizes without domain-specific rules. Our experiments demonstrate the effectiveness of the proposed approach under both RLVR and model distillation training paradigms. The results show that training with our synthesized data yields significant improvements on both the LiveCodeBench and AgentBench-OS tasks, highlighting the robust generalization of our framework.
Diagnosing Representation Dynamics in NER Model Extension
Venue: arXiv cs.CL 2025
Year: 2025

Extending Named Entity Recognition (NER) models to new PII entities in noisy spoken-language data is a common need. We find that jointly fine-tuning a BERT model on standard semantic entities (PER, LOC, ORG) and new pattern-based PII (EMAIL, PHONE) results in minimal degradation for original classes. We investigate this "peaceful coexistence," hypothesizing that the model uses independent semantic vs. morphological feature mechanisms. Using an incremental learning setup as a diagnostic tool, we measure semantic drift and find two key insights. First, the LOC (location) entity is uniquely vulnerable due to a representation overlap with new PII, as it shares pattern-like features (e.g., postal codes). Second, we identify a "reverse O-tag representation drift." The model, initially trained to map PII patterns to 'O', blocks new learning. This is resolved only by unfreezing the 'O' tag's classifier, allowing the background class to adapt and "release" these patterns. This work provides a mechanistic diagnosis of NER model adaptation, highlighting feature independence, representation overlap, and 'O' tag plasticity. Work done based on data gathered by https://www.papernest.com
Attention-Guided Deep Adversarial Temporal Subspace Clustering (A-DATSC) Model for multivariate spatiotemporal data
Venue: arXiv cs.LG 2025
Year: 2025

Deep subspace clustering models are vital for applications such as snowmelt detection, sea ice tracking, crop health monitoring, infectious disease modeling, network load prediction, and land-use planning, where multivariate spatiotemporal data exhibit complex temporal dependencies and reside on multiple nonlinear manifolds beyond the capability of traditional clustering methods. These models project data into a latent space where samples lie in linear subspaces and exploit the self-expressiveness property to uncover intrinsic relationships. Despite their success, existing methods face major limitations: they use shallow autoencoders that ignore clustering errors, emphasize global features while neglecting local structure, fail to model long-range dependencies and positional information, and are rarely applied to 4D spatiotemporal data. To address these issues, we propose A-DATSC (Attention-Guided Deep Adversarial Temporal Subspace Clustering), a model combining a deep subspace clustering generator and a quality-verifying discriminator. The generator, inspired by U-Net, preserves spatial and temporal integrity through stacked TimeDistributed ConvLSTM2D layers, reducing parameters and enhancing generalization. A graph attention transformer based self-expressive network captures local spatial relationships, global dependencies, and both short- and long-range correlations. Experiments on three real-world multivariate spatiotemporal datasets show that A-DATSC achieves substantially superior clustering performance compared to state-of-the-art deep subspace clustering models.
JunoBench: A Benchmark Dataset of Crashes in Python Machine Learning Jupyter Notebooks
Venue: arXiv cs.SE 2025
Year: 2025

Jupyter notebooks are widely used for machine learning (ML) prototyping. Yet, few debugging tools are designed for ML code in notebooks, partly, due to the lack of benchmarks. We introduce JunoBench, the first benchmark dataset of real-world crashes in Python-based ML notebooks. JunoBench includes 111 curated and reproducible crashes with verified fixes from public Kaggle notebooks, covering popular ML libraries (e.g., TensorFlow/Keras, PyTorch, Scikit-learn) and notebook-specific out-of-order execution errors. JunoBench ensures reproducibility and ease of use through a unified environment that reliably reproduces all crashes. By providing realistic crashes, their resolutions, richly annotated labels of crash characteristics, and natural-language diagnostic annotations, JunoBench facilitates research on bug detection, localization, diagnosis, and repair in notebook-based ML development.
ViBED-Net: Video Based Engagement Detection Network Using Face-Aware and Scene-Aware Spatiotemporal Cues
Venue: arXiv cs.CV 2025
Year: 2025

Engagement detection in online learning environments is vital for improving student outcomes and personalizing instruction. We present ViBED-Net (Video-Based Engagement Detection Network), a novel deep learning framework designed to assess student engagement from video data using a dual-stream architecture. ViBED-Net captures both facial expressions and full-scene context by processing facial crops and entire video frames through EfficientNetV2 for spatial feature extraction. These features are then analyzed over time using two temporal modeling strategies: Long Short-Term Memory (LSTM) networks and Transformer encoders. Our model is evaluated on the DAiSEE dataset, a large-scale benchmark for affective state recognition in e-learning. To enhance performance on underrepresented engagement classes, we apply targeted data augmentation techniques. Among the tested variants, ViBED-Net with LSTM achieves 73.43\% accuracy, outperforming existing state-of-the-art approaches. ViBED-Net demonstrates that combining face-aware and scene-aware spatiotemporal cues significantly improves engagement detection accuracy. Its modular design allows flexibility for application across education, user experience research, and content personalization. This work advances video-based affective computing by offering a scalable, high-performing solution for real-world engagement analysis. The source code for this project is available on https://github.com/prateek-gothwal/ViBED-Net .
OPTAGENT: Optimizing Multi-Agent LLM Interactions Through Verbal Reinforcement Learning for Enhanced Reasoning
Venue: arXiv cs.AI 2025
Year: 2025

Large Language Models (LLMs) have shown remarkable reasoning capabilities in mathematical and scientific tasks. To enhance complex reasoning, multi-agent systems have been proposed to harness the collective intelligence of LLM agents. However, existing collaboration structures are either predefined or rely on majority voting or round-table debates, which can suppress correct but less dominant agent contributions. Recent approaches model multi-agent systems as graph networks but optimize purely for agent performance, neglecting the quality of interactions. We hypothesize that effective agent communication is crucial for multi-agent reasoning and that debating quality plays a significant role. To address this, we propose $\ours$, a multi-agent verbal reinforcement learning algorithm that dynamically constructs and refines multi-agent collaboration structures. Our method defines action spaces and a feedback mechanism that evaluates communication robustness and coherence throughout the debate. The final decision is achieved through a majority vote over all the agents. We assess $\ours$ on various reasoning tasks, including mathematical reasoning, creative writing, scientific reasoning, and numerical sorting. Results demonstrate that our approach significantly outperforms single-agent prompting methods and state-of-the-art multi-agent frameworks on diverse tasks.
Benchmarking Probabilistic Time Series Forecasting Models on Neural Activity
Venue: arXiv cs.LG 2025
Year: 2025

Neural activity forecasting is central to understanding neural systems and enabling closed-loop control. While deep learning has recently advanced the state-of-the-art in the time series forecasting literature, its application to neural activity forecasting remains limited. To bridge this gap, we systematically evaluated eight probabilistic deep learning models, including two foundation models, that have demonstrated strong performance on general forecasting benchmarks. We compared them against four classical statistical models and two baseline methods on spontaneous neural activity recorded from mouse cortex via widefield imaging. Across prediction horizons, several deep learning models consistently outperformed classical approaches, with the best model producing informative forecasts up to 1.5 seconds into the future. Our findings point toward future control applications and open new avenues for probing the intrinsic temporal structure of neural activity.
Cross-Domain Long-Term Forecasting: Radiation Dose from Sparse Neutron Sensor via Spatio-Temporal Operator Network
Venue: arXiv cs.LG 2025
Year: 2025

Forecasting unobservable physical quantities from sparse, cross-domain sensor data is a central unsolved problem in scientific machine learning. Existing neural operators and large-scale forecasters rely on dense, co-located input-output fields and short temporal contexts, assumptions that fail in real-world systems where sensing and prediction occur on distinct physical manifolds and over long timescales. We introduce the Spatio-Temporal Operator Network (STONe), a non-autoregressive neural operator that learns a stable functional mapping between heterogeneous domains. By directly inferring high-altitude radiation dose fields from sparse ground-based neutron measurements, STONe demonstrates that operator learning can generalize beyond shared-domain settings. It defines a nonlinear operator between sensor and target manifolds that remains stable over long forecasting horizons without iterative recurrence. This challenges the conventional view that operator learning requires domain alignment or autoregressive propagation. Trained on 23 years of global neutron data, STONe achieves accurate 180-day forecasts with millisecond inference latency. The framework establishes a general principle for cross-domain operator inference, enabling real-time prediction of complex spatiotemporal fields in physics, climate, and energy systems.
Language Models as Semantic Augmenters for Sequential Recommenders
Venue: arXiv cs.CL 2025
Year: 2025

Large Language Models (LLMs) excel at capturing latent semantics and contextual relationships across diverse modalities. However, in modeling user behavior from sequential interaction data, performance often suffers when such semantic context is limited or absent. We introduce LaMAR, a LLM-driven semantic enrichment framework designed to enrich such sequences automatically. LaMAR leverages LLMs in a few-shot setting to generate auxiliary contextual signals by inferring latent semantic aspects of a user's intent and item relationships from existing metadata. These generated signals, such as inferred usage scenarios, item intents, or thematic summaries, augment the original sequences with greater contextual depth. We demonstrate the utility of this generated resource by integrating it into benchmark sequential modeling tasks, where it consistently improves performance. Further analysis shows that LLM-generated signals exhibit high semantic novelty and diversity, enhancing the representational capacity of the downstream models. This work represents a new data-centric paradigm where LLMs serve as intelligent context generators, contributing a new method for the semi-automatic creation of training data and language resources.
A New Broadcast Model for Several Network Topologies
Venue: arXiv cs.NI 2025
Year: 2025

We present Broadcast by Balanced Saturation (BBS), a general broadcast algorithm designed to optimize communication efficiency across diverse network topologies. BBS maximizes node utilization, addressing challenges in broadcast operations such as topology constraints, bandwidth limitations, and synchronization overhead, particularly in large-scale systems like supercomputers. The algorithm ensures sustained activity with nodes throughout the broadcast, thereby enhancing data propagation and significantly reducing latency. Through a precise communication cycle, BBS provides a repeatable, streamlined, stepwise broadcasting framework. Simulation results across various topologies demonstrate that the BBS algorithm consistently outperforms common general broadcast algorithms, often by a substantial margin. These findings suggest that BBS is a versatile and robust framework with the potential to redefine broadcast strategies across network topologies.
A Generalization of Distance Domination
Venue: arXiv cs.DS 2025
Year: 2025

Expanding on the graph theoretic ideas of k-component order connectivity and distance-l domination, we present a quadratic-complexity algorithm that finds a tree's minimum failure-set cardinality, i.e., the minimum cardinality any subset of the tree's vertices must have so that all clusters of vertices further away than some l do not exceed a cardinality threshold. Applications of solutions to the expanded problems include choosing service center locations so that no large neighborhoods are excluded from service, while reducing the redundancy inherent in distance domination problems.
Big Data, Tiny Targets: An Exploratory Study in Machine Learning-enhanced Detection of Microplastic from Filters
Venue: arXiv cs.CV 2025
Year: 2025

Microplastics (MPs) are ubiquitous pollutants with demonstrated potential to impact ecosystems and human health. Their microscopic size complicates detection, classification, and removal, especially in biological and environmental samples. While techniques like optical microscopy, Scanning Electron Microscopy (SEM), and Atomic Force Microscopy (AFM) provide a sound basis for detection, applying these approaches requires usually manual analysis and prevents efficient use in large screening studies. To this end, machine learning (ML) has emerged as a powerful tool in advancing microplastic detection. In this exploratory study, we investigate potential, limitations and future directions of advancing the detection and quantification of MP particles and fibres using a combination of SEM imaging and machine learning-based object detection. For simplicity, we focus on a filtration scenario where image backgrounds exhibit a symmetric and repetitive pattern. Our findings indicate differences in the quality of YOLO models for the given task and the relevance of optimizing preprocessing. At the same time, we identify open challenges, such as limited amounts of expert-labeled data necessary for reliable training of ML models.
From Volume Rendering to 3D Gaussian Splatting: Theory and Applications
Venue: arXiv cs.CV 2025
Year: 2025

The problem of 3D reconstruction from posed images is undergoing a fundamental transformation, driven by continuous advances in 3D Gaussian Splatting (3DGS). By modeling scenes explicitly as collections of 3D Gaussians, 3DGS enables efficient rasterization through volumetric splatting, offering thus a seamless integration with common graphics pipelines. Despite its real-time rendering capabilities for novel view synthesis, 3DGS suffers from a high memory footprint, the tendency to bake lighting effects directly into its representation, and limited support for secondary-ray effects. This tutorial provides a concise yet comprehensive overview of the 3DGS pipeline, starting from its splatting formulation and then exploring the main efforts in addressing its limitations. Finally, we survey a range of applications that leverage 3DGS for surface reconstruction, avatar modeling, animation, and content generation-highlighting its efficient rendering and suitability for feed-forward pipelines.