OpenRaiser/Intern-Atlas huggingface dataset:
Breaking the Modality Barrier: Universal Embedding Learning with Multimodal LLMs
Venue: arXiv cs.CV 2025
Year: 2025

The Contrastive Language-Image Pre-training (CLIP) framework has become a widely used approach for multimodal representation learning, particularly in image-text retrieval and clustering. However, its efficacy is constrained by three key limitations: (1) text token truncation, (2) isolated image-text encoding, and (3) deficient compositionality due to bag-of-words behavior. While recent Multimodal Large Language Models (MLLMs) have demonstrated significant advances in generalized vision-language understanding, their potential for learning transferable multimodal representations remains underexplored.In this work, we present UniME (Universal Multimodal Embedding), a novel two-stage framework that leverages MLLMs to learn discriminative representations for diverse downstream tasks. In the first stage, we perform textual discriminative knowledge distillation from a powerful LLM-based teacher model to enhance the embedding capability of the MLLMś language component. In the second stage, we introduce hard negative enhanced instruction tuning to further advance discriminative representation learning. Specifically, we initially mitigate false negative contamination and then sample multiple hard negatives per instance within each batch, forcing the model to focus on challenging samples. This approach not only improves discriminative power but also enhances instruction-following ability in downstream tasks. We conduct extensive experiments on the MMEB benchmark and multiple retrieval tasks, including short and long caption retrieval and compositional retrieval. Results demonstrate that UniME achieves consistent performance improvement across all tasks, exhibiting superior discriminative and compositional capabilities.
Evaluating Time Series Models for Urban Wastewater Management: Predictive Performance, Model Complexity and Resilience
Venue: arXiv cs.LG 2025
Year: 2025

Climate change increases the frequency of extreme rainfall, placing a significant strain on urban infrastructures, especially Combined Sewer Systems (CSS). Overflows from overburdened CSS release untreated wastewater into surface waters, posing environmental and public health risks. Although traditional physics-based models are effective, they are costly to maintain and difficult to adapt to evolving system dynamics. Machine Learning (ML) approaches offer cost-efficient alternatives with greater adaptability. To systematically assess the potential of ML for modeling urban infrastructure systems, we propose a protocol for evaluating Neural Network architectures for CSS time series forecasting with respect to predictive performance, model complexity, and robustness to perturbations. In addition, we assess model performance on peak events and critical fluctuations, as these are the key regimes for urban wastewater management. To investigate the feasibility of lightweight models suitable for IoT deployment, we compare global models, which have access to all information, with local models, which rely solely on nearby sensor readings. Additionally, to explore the security risks posed by network outages or adversarial attacks on urban infrastructure, we introduce error models that assess the resilience of models. Our results demonstrate that while global models achieve higher predictive performance, local models provide sufficient resilience in decentralized scenarios, ensuring robust modeling of urban infrastructure. Furthermore, models with longer native forecast horizons exhibit greater robustness to data perturbations. These findings contribute to the development of interpretable and reliable ML solutions for sustainable urban wastewater management. The implementation is available in our GitHub repository.
GRANITE : a Byzantine-Resilient Dynamic Gossip Learning Framework
Venue: arXiv cs.LG 2025
Year: 2025

Gossip Learning (GL) is a decentralized learning paradigm where users iteratively exchange and aggregate models with a small set of neighboring peers. Recent GL approaches rely on dynamic communication graphs built and maintained using Random Peer Sampling (RPS) protocols. Thanks to graph dynamics, GL can achieve fast convergence even over extremely sparse topologies. However, the robustness of GL over dy- namic graphs to Byzantine (model poisoning) attacks remains unaddressed especially when Byzantine nodes attack the RPS protocol to scale up model poisoning. We address this issue by introducing GRANITE, a framework for robust learning over sparse, dynamic graphs in the presence of a fraction of Byzantine nodes. GRANITE relies on two key components (i) a History-aware Byzantine-resilient Peer Sampling protocol (HaPS), which tracks previously encountered identifiers to reduce adversarial influence over time, and (ii) an Adaptive Probabilistic Threshold (APT), which leverages an estimate of Byzantine presence to set aggregation thresholds with formal guarantees. Empirical results confirm that GRANITE maintains convergence with up to 30% Byzantine nodes, improves learning speed via adaptive filtering of poisoned models and obtains these results in up to 9 times sparser graphs than dictated by current theory.
Combining GCN Structural Learning with LLM Chemical Knowledge for Enhanced Virtual Screening
Venue: arXiv cs.LG 2025
Year: 2025

Virtual screening plays a critical role in modern drug discovery by enabling the identification of promising candidate molecules for experimental validation. Traditional machine learning methods such, as Support Vector Machines (SVM) and XGBoost, rely on predefined molecular representations, often leading to information loss and potential bias. In contrast, deep learning approaches-particularly Graph Convolutional Networks (GCNs)-offer a more expressive and unbiased alternative by operating directly on molecular graphs. Meanwhile, Large Language Models (LLMs) have recently demonstrated state-of-the-art performance in drug design, thanks to their capacity to capture complex chemical patterns from large-scale data via attention mechanisms. In this paper, we propose a hybrid architecture that integrates GCNs with LLM-derived embeddings to combine localized structural learning with global chemical knowledge. The LLM embeddings can be precomputed and stored in a molecular feature library, removing the need to rerun the LLM during training or inference and thus maintaining computational efficiency. We found that concatenating the LLM embeddings after each GCN layer-rather than only at the final layer-significantly improves performance, enabling deeper integration of global context throughout the network. The resulting model achieves superior results, with an F1-score of (88.8\%), outperforming standalone GCN (87.9%), XGBoost (85.5%), and SVM (85.4%) baselines.
Safe to Stay: Psychological Safety Sustains Participation in Pull-based Open Source Projects
Venue: arXiv cs.SE 2025
Year: 2025

Background: Psychological safety refers to the belief that team members can speak up or make mistakes without fear of negative consequences. While it is recognized as important in traditional software teams, its role in open-source software development remains understudied. Open-source contributors often collaborate without formal roles or structures, where interpersonal relationships can significantly influence participation. Code review, a central and collaborative activity in modern software development, offers a valuable context for observing such team interactions. Aims: This study investigates whether team-level psychological safety, inferred from code review activities, is associated with contributors' sustained participation in open-source projects. Method: Using data from 60,684 pull requests across multiple repositories, we developed a psychological safety index based on observable cues such as merge decisions, comment activity, interaction diversity, and mentions. We analyzed the relationship between this index and contributors' short-term (within 1 year) and long-term (over 4--5 years) sustained participation using three logistic regression models. Results: Contributors are more likely to remain active in repositories with higher levels of psychological safety. Psychological safety is positively associated with both short-term and long-term sustained participation. However, prior participation emerges as a stronger predictor of future engagement, reducing the effect of psychological safety when accounted for. Conclusions: This study introduces a scalable, data-driven approach to measuring psychological safety through pull request data and provides new empirical evidence of its relevance in sustaining participation within open-source development.
TableCenterNet: A one-stage network for table structure recognition
Venue: arXiv cs.CV 2025
Year: 2025

Table structure recognition aims to parse tables in unstructured data into machine-understandable formats. Recent methods address this problem through a two-stage process or optimized one-stage approaches. However, these methods either require multiple networks to be serially trained and perform more time-consuming sequential decoding, or rely on complex post-processing algorithms to parse the logical structure of tables. They struggle to balance cross-scenario adaptability, robustness, and computational efficiency. In this paper, we propose a one-stage end-to-end table structure parsing network called TableCenterNet. This network unifies the prediction of table spatial and logical structure into a parallel regression task for the first time, and implicitly learns the spatial-logical location mapping laws of cells through a synergistic architecture of shared feature extraction layers and task-specific decoding. Compared with two-stage methods, our method is easier to train and faster to infer. Experiments on benchmark datasets show that TableCenterNet can effectively parse table structures in diverse scenarios and achieve state-of-the-art performance on the TableGraph-24k dataset. Code is available at https://github.com/dreamy-xay/TableCenterNet.
Cooperative Task Offloading through Asynchronous Deep Reinforcement Learning in Mobile Edge Computing for Future Networks
Venue: arXiv cs.LG 2025
Year: 2025

Future networks (including 6G) are poised to accelerate the realisation of Internet of Everything. However, it will result in a high demand for computing resources to support new services. Mobile Edge Computing (MEC) is a promising solution, enabling to offload computation-intensive tasks to nearby edge servers from the end-user devices, thereby reducing latency and energy consumption. However, relying solely on a single MEC server for task offloading can lead to uneven resource utilisation and suboptimal performance in complex scenarios. Additionally, traditional task offloading strategies specialise in centralised policy decisions, which unavoidably entail extreme transmission latency and reach computational bottleneck. To fill the gaps, we propose a latency and energy efficient Cooperative Task Offloading framework with Transformer-driven Prediction (CTO-TP), leveraging asynchronous multi-agent deep reinforcement learning to address these challenges. This approach fosters edge-edge cooperation and decreases the synchronous waiting time by performing asynchronous training, optimising task offloading, and resource allocation across distributed networks. The performance evaluation demonstrates that the proposed CTO-TP algorithm reduces up to 80% overall system latency and 87% energy consumption compared to the baseline schemes.
Towards Machine-Generated Code for the Resolution of User Intentions
Venue: arXiv cs.AI 2025
Year: 2025

The growing capabilities of Artificial Intelligence (AI), particularly Large Language Models (LLMs), prompt a reassessment of the interaction mechanisms between users and their devices. Currently, users are required to use a set of high-level applications to achieve their desired results. However, the advent of AI may signal a shift in this regard, as its capabilities have generated novel prospects for user-provided intent resolution through the deployment of model-generated code. This development represents a significant progression in the realm of hybrid workflows, where human and artificial intelligence collaborate to address user intentions, with the former responsible for defining these intentions and the latter for implementing the solutions to address them. In this paper, we investigate the feasibility of generating and executing workflows through code generation that results from prompting an LLM with a concrete user intention, and a simplified application programming interface for a GUI-less operating system. We provide an in-depth analysis and comparison of various user intentions, the resulting code, and its execution. The findings demonstrate the general feasibility of our approach and that the employed LLM, GPT-4o-mini, exhibits remarkable proficiency in the generation of code-oriented workflows in accordance with provided user intentions.
Dynamic Membership for Regular Tree Languages
Venue: arXiv cs.FL 2025
Year: 2025

We study the dynamic membership problem for regular tree languages under relabeling updates: we fix an alphabet $Σ$ and a regular tree language $L$ over $Σ$ (expressed, e.g., as a tree automaton), we are given a tree $T$ with labels in $Σ$, and we must maintain the information of whether the tree $T$ belongs to $L$ while handling relabeling updates that change the labels of individual nodes in $T$. Our first contribution is to show that this problem admits an $O(\log n / \log \log n)$ algorithm for any fixed regular tree language, improving over known $O(\log n)$ algorithms. This generalizes the known $O(\log n / \log \log n)$ upper bound over words, and it matches the lower bound of $Ω(\log n / \log \log n)$ from dynamic membership to some word languages and from the existential marked ancestor problem. Our second contribution is to introduce a class of regular languages, dubbed almost-commutative tree languages, and show that dynamic membership to such languages under relabeling updates can be decided in constant time per update. Almost-commutative languages generalize both commutative languages and finite languages: they are the analogue for trees of the ZG languages enjoying constant-time dynamic membership over words. Our main technical contribution is to show that this class is conditionally optimal when we assume that the alphabet features a neutral letter, i.e., a letter that has no effect on membership to the language. More precisely, we show that any regular tree language with a neutral letter which is not almost-commutative cannot be maintained in constant time under the assumption that the prefix-U1 problem from (Amarilli, Jachiet, Paperman, ICALP'21) also does not admit a constant-time algorithm.
Beyond Cox Models: Assessing the Performance of Machine-Learning Methods in Non-Proportional Hazards and Non-Linear Survival Analysis
Venue: arXiv cs.LG 2025
Year: 2025

Survival analysis often relies on Cox models, assuming both linearity and proportional hazards (PH). This study evaluates machine and deep learning methods that relax these constraints, comparing their performance with penalized Cox models on a benchmark of three synthetic and three real datasets. In total, eight different models were tested, including six non-linear models of which four were also non-PH. Although Cox regression often yielded satisfactory performance, we showed the conditions under which machine and deep learning models can perform better. Indeed, the performance of these methods has often been underestimated due to the improper use of Harrell's concordance index (C-index) instead of more appropriate scores such as Antolini's concordance index, which generalizes C-index in cases where the PH assumption does not hold. In addition, since occasionally high C-index models happen to be badly calibrated, combining Antolini's C-index with Brier's score is useful to assess the overall performance of a survival method. Results on our benchmark data showed that survival prediction should be approached by testing different methods to select the most appropriate one according to sample size, non-linearity and non-PH conditions. To allow an easy reproducibility of these tests on our benchmark data, code and documentation are freely available at https://github.com/compbiomed-unito/survhive.
RAGAT-Mind: A Multi-Granular Modeling Approach for Rumor Detection Based on MindSpore
Venue: arXiv cs.CL 2025
Year: 2025

As false information continues to proliferate across social media platforms, effective rumor detection has emerged as a pressing challenge in natural language processing. This paper proposes RAGAT-Mind, a multi-granular modeling approach for Chinese rumor detection, built upon the MindSpore deep learning framework. The model integrates TextCNN for local semantic extraction, bidirectional GRU for sequential context learning, Multi-Head Self-Attention for global dependency focusing, and Bidirectional Graph Convolutional Networks (BiGCN) for structural representation of word co-occurrence graphs. Experiments on the Weibo1-Rumor dataset demonstrate that RAGAT-Mind achieves superior classification performance, attaining 99.2% accuracy and a macro-F1 score of 0.9919. The results validate the effectiveness of combining hierarchical linguistic features with graph-based semantic structures. Furthermore, the model exhibits strong generalization and interpretability, highlighting its practical value for real-world rumor detection applications.
Occlusion-Aware Self-Supervised Monocular Depth Estimation for Weak-Texture Endoscopic Images
Venue: arXiv cs.CV 2025
Year: 2025

We propose a self-supervised monocular depth estimation network tailored for endoscopic scenes, aiming to infer depth within the gastrointestinal tract from monocular images. Existing methods, though accurate, typically assume consistent illumination, which is often violated due to dynamic lighting and occlusions caused by GI motility. These variations lead to incorrect geometric interpretations and unreliable self-supervised signals, degrading depth reconstruction quality. To address this, we introduce an occlusion-aware self-supervised framework. First, we incorporate an occlusion mask for data augmentation, generating pseudo-labels by simulating viewpoint-dependent occlusion scenarios. This enhances the model's ability to learn robust depth features under partial visibility. Second, we leverage semantic segmentation guided by non-negative matrix factorization, clustering convolutional activations to generate pseudo-labels in texture-deprived regions, thereby improving segmentation accuracy and mitigating information loss from lighting changes. Experimental results on the SCARED dataset show that our method achieves state-of-the-art performance in self-supervised depth estimation. Additionally, evaluations on the Endo-SLAM and SERV-CT datasets demonstrate strong generalization across diverse endoscopic environments.
Shared Randomness in Locally Checkable Problems: The Role of Computational Assumptions
Venue: arXiv cs.DC 2025
Year: 2025

Shared randomness is a valuable resource in distributed computing, allowing some form of coordination between processors without explicit communication. But what happens when the shared random string can affect the inputs to the system? Consider the class of distributed graph problems where the correctness of solutions can be checked locally, known as Locally Checkable Labelings (LCL). LCL problems have been extensively studied in the LOCAL model, where nodes operate in synchronous rounds and have access only to local information. This has led to intriguing insights regarding the power of private randomness. E.g., for certain round complexity classes, derandomization does not incur an overhead (asymptotically). This work considers a setting where the randomness is public. Recently, an LCL problem for which shared randomness can reduce the round complexity was discovered by Balliu et al. (ICALP 2025). This result applies to inputs set obliviously of the shared randomness, which may not always be a plausible assumption. We define a model where the inputs can be adversarially chosen, even based on the shared randomness, which we now call preset public coins. We study LCL problems in the preset public coins model, under assumptions regarding the computational power of the adversary that selects the input. We show connections to hardness in the class TFNP. Our results are: 1. Assuming a hard-on-average problem in TFNP, we present an LCL problem that, in the preset public coins model, demonstrates a gap in the round complexity between polynomial-time and unbounded adversaries. 2. An LCL problem for which the error probability is significantly higher when facing unbounded adversaries implies a hard-on-average problem in TFNP/poly.
TSUE: A Two-Stage Data Update Method for an Erasure Coded Cluster File System
Venue: arXiv cs.DC 2025
Year: 2025

Compared to replication-based storage systems, erasure-coded storage incurs significantly higher overhead during data updates. To address this issue, various parity logging methods have been pro- posed. Nevertheless, due to the long update path and substantial amount of random I/O involved in erasure code update processes, the resulting long latency and low throughput often fail to meet the requirements of high performance applications. To this end, we propose a two-stage data update method called TSUE. TSUE divides the update process into a synchronous stage that records updates in a data log, and an asynchronous stage that recycles the log in real-time. TSUE effectively reduces update latency by transforming random I/O into sequential I/O, and it significantly reduces recycle overhead by utilizing a three-layer log and the spatio-temporal locality of access patterns. In SSDs cluster, TSUE significantly im- proves update performance, achieving improvements of 7.6X under Ali-Cloud trace, 5X under Ten-Cloud trace, while it also extends the SSD's lifespan by up to 13X through reducing the frequencies of reads/writes and of erase operations.
TarDiff: Target-Oriented Diffusion Guidance for Synthetic Electronic Health Record Time Series Generation
Venue: arXiv cs.LG 2025
Year: 2025

Synthetic Electronic Health Record (EHR) time-series generation is crucial for advancing clinical machine learning models, as it helps address data scarcity by providing more training data. However, most existing approaches focus primarily on replicating statistical distributions and temporal dependencies of real-world data. We argue that fidelity to observed data alone does not guarantee better model performance, as common patterns may dominate, limiting the representation of rare but important conditions. This highlights the need for generate synthetic samples to improve performance of specific clinical models to fulfill their target outcomes. To address this, we propose TarDiff, a novel target-oriented diffusion framework that integrates task-specific influence guidance into the synthetic data generation process. Unlike conventional approaches that mimic training data distributions, TarDiff optimizes synthetic samples by quantifying their expected contribution to improving downstream model performance through influence functions. Specifically, we measure the reduction in task-specific loss induced by synthetic samples and embed this influence gradient into the reverse diffusion process, thereby steering the generation towards utility-optimized data. Evaluated on six publicly available EHR datasets, TarDiff achieves state-of-the-art performance, outperforming existing methods by up to 20.4% in AUPRC and 18.4% in AUROC. Our results demonstrate that TarDiff not only preserves temporal fidelity but also enhances downstream model performance, offering a robust solution to data scarcity and class imbalance in healthcare analytics.