OpenRaiser/Intern-Atlas huggingface dataset:
GeoPixel: Pixel Grounding Large Multimodal Model in Remote Sensing
Venue: Conference ICML 2025
Year: 2025

Recent advances in large multimodal models (LMMs) have recognized fine-grained grounding as an imperative factor of visual understanding and dialogue. However, the benefits of such representation in LMMs are limited to the natural image domain, and these models perform poorly for remote sensing (RS). The distinct overhead viewpoint, scale variation, and presence of small objects in high-resolution RS imagery present a unique challenge in region-level comprehension. Moreover, the development of the grounding conversation capability of LMMs within RS is hindered by the lack of granular, RS domain-specific grounded data. Addressing these limitations, we propose GeoPixel - the first end-to-end high resolution RS-LMM that supports pixel-level grounding. This capability allows fine-grained visual perception by generating interleaved masks in conversation. GeoPixel supports up to 4K HD resolution in any aspect ratio, ideal for high-precision RS image analysis. To support the grounded conversation generation (GCG) in RS imagery, we curate a visually grounded dataset GeoPixelD through a semi-automated pipeline that utilizes set-of-marks prompting and spatial priors tailored for RS data to methodically control the data generation process. GeoPixel demonstrates superior performance in pixel-level comprehension, surpassing existing LMMs in both single-target and multi-target segmentation tasks. Our methodological ablation studies validate the effectiveness of each component in the overall architecture. Our code and data will be publicly released.
Confounder-Free Continual Learning via Recursive Feature Normalization
Venue: Conference ICML 2025
Year: 2025

Confounders are extraneous variables that affect both the input and the target, resulting in spurious correlations and biased predictions. There are recent advances in dealing with or removing confounders in traditional models, such as metadata normalization (MDN), where the distribution of the learned features is adjusted based on the study confounders. However, in the context of continual learning, where a model learns continuously from new data over time without forgetting, learning feature representations that are invariant to confounders remains a significant challenge. To remove their influence from intermediate feature representations, we introduce the Recursive MDN (R-MDN) layer, which can be integrated into any deep learning architecture, including vision transformers, and at any model stage. R-MDN performs statistical regression via the recursive least squares algorithm to maintain and continually update an internal model state with respect to changing distributions of data and confounding variables. Our experiments demonstrate that R-MDN promotes equitable predictions across population groups, both within static learning and across different stages of continual learning, by reducing catastrophic forgetting caused by confounder effects changing over time.
ESPFormer: Doubly-Stochastic Attention with Expected Sliced Transport Plans
Venue: Conference ICML 2025
Year: 2025

While self-attention has been instrumental in the success of Transformers, it can lead to over-concentration on a few tokens during training, resulting in suboptimal information flow. Enforcing doubly-stochastic constraints in attention matrices has been shown to improve structure and balance in attention distributions. However, existing methods rely on iterative Sinkhorn normalization, which is computationally costly. In this paper, we introduce a novel, fully parallelizable doubly-stochastic attention mechanism based on sliced optimal transport, leveraging Expected Sliced Transport Plans (ESP). Unlike prior approaches, our method enforces doubly stochasticity without iterative Sinkhorn normalization, significantly enhancing efficiency. To ensure differentiability, we incorporate a temperature-based soft sorting technique, enabling seamless integration into deep learning models. Experiments across multiple benchmark datasets, including image classification, point cloud classification, sentiment analysis, and neural machine translation, demonstrate that our enhanced attention regularization consistently improves performance across diverse applications. Our implementation code can be found at https://github.com/dariansal/ESPFormer.
LongRoPE2: Near-Lossless LLM Context Window Scaling
Venue: Conference ICML 2025
Year: 2025

LongRoPE2 is a novel approach that extends the effective context window of pre-trained large language models (LLMs) to the target length, while preserving the performance on the original shorter context window. This is achieved by three contributions: (1) a hypothesis that insufficient training in higher RoPE dimensions contributes to the persistent out-of-distribution (OOD) issues observed in existing methods; (2) an effective RoPE rescaling algorithm that adopts evolutionary search guided by "needle-driven" perplexity to address the insufficient training problem; (3) a mixed context window training approach that fine-tunes model weights to adopt rescaled RoPE for long-context sequences while preserving the short-context performance with the original RoPE. Extensive experiments on LLaMA3-8B and Phi3-mini-3.8B across various benchmarks validate the hypothesis and demonstrate the effectiveness of LongRoPE2. Remarkably, LongRoPE2 extends LLaMA3-8B to achieve a 128K effective context length while retaining over 98.5% of short-context performance, using only 10B tokens -- 80x fewer than Meta's approach, which fails to reach the target effective context length. Code will be available at https://github.com/microsoft/LongRoPE.
Do Multiple Instance Learning Models Transfer?
Venue: Conference ICML 2025
Year: 2025

Multiple Instance Learning (MIL) is a cornerstone approach in computational pathology (CPath) for generating clinically meaningful slide-level embeddings from gigapixel tissue images. However, MIL often struggles with small, weakly supervised clinical datasets. In contrast to fields such as NLP and conventional computer vision, where transfer learning is widely used to address data scarcity, the transferability of MIL models remains poorly understood. In this study, we systematically evaluate the transfer learning capabilities of pretrained MIL models by assessing 11 models across 21 pretraining tasks for morphological and molecular subtype prediction. Our results show that pretrained MIL models, even when trained on different organs than the target task, consistently outperform models trained from scratch. Moreover, pretraining on pancancer datasets enables strong generalization across organs and tasks, outperforming slide foundation models while using substantially less pretraining data. These findings highlight the robust adaptability of MIL models and demonstrate the benefits of leveraging transfer learning to boost performance in CPath. Lastly, we provide a resource which standardizes the implementation of MIL models and collection of pretrained model weights on popular CPath tasks, available at https://github.com/mahmoodlab/MIL-Lab
Continuous Visual Autoregressive Generation via Score Maximization
Venue: Conference ICML 2025
Year: 2025

Conventional wisdom suggests that autoregressive models are used to process discrete data. When applied to continuous modalities such as visual data, Visual AutoRegressive modeling (VAR) typically resorts to quantization-based approaches to cast the data into a discrete space, which can introduce significant information loss. To tackle this issue, we introduce a Continuous VAR framework that enables direct visual autoregressive generation without vector quantization. The underlying theoretical foundation is strictly proper scoring rules, which provide powerful statistical tools capable of evaluating how well a generative model approximates the true distribution. Within this framework, all we need is to select a strictly proper score and set it as the training objective to optimize. We primarily explore a class of training objectives based on the energy score, which is likelihood-free and thus overcomes the difficulty of making probabilistic predictions in the continuous space. Previous efforts on continuous autoregressive generation, such as GIVT and diffusion loss, can also be derived from our framework using other strictly proper scores. Source code: https://github.com/shaochenze/EAR.
Should Decision-Makers Reveal Classifiers in Online Strategic Classification?
Venue: Conference ICML 2025
Year: 2025

Strategic classification addresses a learning problem where a decision-maker implements a classifier over agents who may manipulate their features in order to receive favorable predictions. In the standard model of online strategic classification, in each round, the decision-maker implements and publicly reveals a classifier, after which agents perfectly best respond based on this knowledge. However, in practice, whether to disclose the classifier is often debated -- some decision-makers believe that hiding the classifier can prevent misclassification errors caused by manipulation. In this paper, we formally examine how limiting the agents' access to the current classifier affects the decision-maker's performance. Specifically, we consider an extended online strategic classification setting where agents lack direct knowledge about the current classifier and instead manipulate based on a weighted average of historically implemented classifiers. Our main result shows that in this setting, the decision-maker incurs $(1-γ)^{-1}$ or $k_{\text{in}}$ times more mistakes compared to the full-knowledge setting, where $k_{\text{in}}$ is the maximum in-degree of the manipulation graph (representing how many distinct feature vectors can be manipulated to appear as a single one), and $γ$ is the discount factor indicating agents' memory of past classifiers. Our results demonstrate how withholding access to the classifier can backfire and degrade the decision-maker's performance in online strategic classification.
TabPFN Unleashed: A Scalable and Effective Solution to Tabular Classification Problems
Venue: Conference ICML 2025
Year: 2025

TabPFN has emerged as a promising in-context learning model for tabular data, capable of directly predicting the labels of test samples given labeled training examples. It has demonstrated competitive performance, particularly on small-scale classification tasks. However, despite its effectiveness, TabPFN still requires further refinement in several areas, including handling high-dimensional features, aligning with downstream datasets, and scaling to larger datasets. In this paper, we revisit existing variants of TabPFN and observe that most approaches focus either on reducing bias or variance, often neglecting the need to address the other side, while also increasing inference overhead. To fill this gap, we propose Beta (Bagging and Encoder-based Fine-tuning for TabPFN Adaptation), a novel and effective method designed to minimize both bias and variance. To reduce bias, we introduce a lightweight encoder to better align downstream tasks with the pre-trained TabPFN. By increasing the number of encoders in a lightweight manner, Beta mitigate variance, thereby further improving the model's performance. Additionally, bootstrapped sampling is employed to further reduce the impact of data perturbations on the model, all while maintaining computational efficiency during inference. Our approach enhances TabPFN's ability to handle high-dimensional data and scale to larger datasets. Experimental results on over 200 benchmark classification datasets demonstrate that Beta either outperforms or matches state-of-the-art methods.
MetaOptimize: A Framework for Optimizing Step Sizes and Other Meta-parameters
Venue: Conference ICML 2025
Year: 2025

We address the challenge of optimizing meta-parameters (hyperparameters) in machine learning, a key factor for efficient training and high model performance. Rather than relying on expensive meta-parameter search methods, we introduce MetaOptimize: a dynamic approach that adjusts meta-parameters, particularly step sizes (also known as learning rates), during training. More specifically, MetaOptimize can wrap around any first-order optimization algorithm, tuning step sizes on the fly to minimize a specific form of regret that considers the long-term impact of step sizes on training, through a discounted sum of future losses. We also introduce lower-complexity variants of MetaOptimize that, in conjunction with its adaptability to various optimization algorithms, achieve performance comparable to those of the best hand-crafted learning rate schedules across diverse machine learning tasks.
X-Hacking: The Threat of Misguided AutoML
Venue: Conference ICML 2025
Year: 2025

Explainable AI (XAI) and interpretable machine learning methods help to build trust in model predictions and derived insights, yet also present a perverse incentive for analysts to manipulate XAI metrics to support pre-specified conclusions. This paper introduces the concept of X-hacking, a form of p-hacking applied to XAI metrics such as SHAP values. We show how easily an automated machine learning pipeline can be adapted to exploit model multiplicity at scale: searching a Rashomon set of 'defensible' models with similar predictive performance to find a desired explanation. We formulate the trade-off between explanation and accuracy as a multi-objective optimisation problem, and illustrate empirically on familiar real-world datasets that, on average, Bayesian optimisation accelerates X-hacking 3-fold for features susceptible to it, versus random sampling. We show the vulnerability of a dataset to X-hacking can be determined by information redundancy among features. Finally, we suggest possible methods for detection and prevention, and discuss ethical implications for the credibility and reproducibility of XAI.
SAFER: A Calibrated Risk-Aware Multimodal Recommendation Model for Dynamic Treatment Regimes
Venue: Conference ICML 2025
Year: 2025

Dynamic treatment regimes (DTRs) are critical to precision medicine, optimizing long-term outcomes through personalized, real-time decision-making in evolving clinical contexts, but require careful supervision for unsafe treatment risks. Existing efforts rely primarily on clinician-prescribed gold standards despite the absence of a known optimal strategy, and predominantly using structured EHR data without extracting valuable insights from clinical notes, limiting their reliability for treatment recommendations. In this work, we introduce SAFER, a calibrated risk-aware tabular-language recommendation framework for DTR that integrates both structured EHR and clinical notes, enabling them to learn from each other, and addresses inherent label uncertainty by assuming ambiguous optimal treatment solution for deceased patients. Moreover, SAFER employs conformal prediction to provide statistical guarantees, ensuring safe treatment recommendations while filtering out uncertain predictions. Experiments on two publicly available sepsis datasets demonstrate that SAFER outperforms state-of-the-art baselines across multiple recommendation metrics and counterfactual mortality rate, while offering robust formal assurances. These findings underscore SAFER potential as a trustworthy and theoretically grounded solution for high-stakes DTR applications.
Long-Term TalkingFace Generation via Motion-Prior Conditional Diffusion Model
Venue: Conference ICML 2025
Year: 2025

Recent advances in conditional diffusion models have shown promise for generating realistic TalkingFace videos, yet challenges persist in achieving consistent head movement, synchronized facial expressions, and accurate lip synchronization over extended generations. To address these, we introduce the \textbf{M}otion-priors \textbf{C}onditional \textbf{D}iffusion \textbf{M}odel (\textbf{MCDM}), which utilizes both archived and current clip motion priors to enhance motion prediction and ensure temporal consistency. The model consists of three key elements: (1) an archived-clip motion-prior that incorporates historical frames and a reference frame to preserve identity and context; (2) a present-clip motion-prior diffusion model that captures multimodal causality for accurate predictions of head movements, lip sync, and expressions; and (3) a memory-efficient temporal attention mechanism that mitigates error accumulation by dynamically storing and updating motion features. We also release the \textbf{TalkingFace-Wild} dataset, a multilingual collection of over 200 hours of footage across 10 languages. Experimental results demonstrate the effectiveness of MCDM in maintaining identity and motion continuity for long-term TalkingFace generation. Code, models, and datasets will be publicly available.
Compositional Flows for 3D Molecule and Synthesis Pathway Co-design
Venue: Conference ICML 2025
Year: 2025

Many generative applications, such as synthesis-based 3D molecular design, involve constructing compositional objects with continuous features. Here, we introduce Compositional Generative Flows (CGFlow), a novel framework that extends flow matching to generate objects in compositional steps while modeling continuous states. Our key insight is that modeling compositional state transitions can be formulated as a straightforward extension of the flow matching interpolation process. We further build upon the theoretical foundations of generative flow networks (GFlowNets), enabling reward-guided sampling of compositional structures. We apply CGFlow to synthesizable drug design by jointly designing the molecule's synthetic pathway with its 3D binding pose. Our approach achieves state-of-the-art binding affinity on all 15 targets from the LIT-PCBA benchmark, and 5.8$\times$ improvement in sampling efficiency compared to 2D synthesis-based baseline. To our best knowledge, our method is also the first to achieve state of-art-performance in both Vina Dock (-9.38) and AiZynth success rate (62.2\%) on the CrossDocked benchmark.
Self-cross Feature based Spiking Neural Networks for Efficient Few-shot Learning
Venue: Conference ICML 2025
Year: 2025

Deep neural networks (DNNs) excel in computer vision tasks, especially, few-shot learning (FSL), which is increasingly important for generalizing from limited examples. However, DNNs are computationally expensive with scalability issues in real world. Spiking Neural Networks (SNNs), with their event-driven nature and low energy consumption, are particularly efficient in processing sparse and dynamic data, though they still encounter difficulties in capturing complex spatiotemporal features and performing accurate cross-class comparisons. To further enhance the performance and efficiency of SNNs in few-shot learning, we propose a few-shot learning framework based on SNNs, which combines a self-feature extractor module and a cross-feature contrastive module to refine feature representation and reduce power consumption. We apply the combination of temporal efficient training loss and InfoNCE loss to optimize the temporal dynamics of spike trains and enhance the discriminative power. Experimental results show that the proposed FSL-SNN significantly improves the classification performance on the neuromorphic dataset N-Omniglot, and also achieves competitive performance to ANNs on static datasets such as CUB and miniImageNet with low power consumption.
Privacy-Shielded Image Compression: Defending Against Exploitation from Vision-Language Pretrained Models
Venue: Conference ICML 2025
Year: 2025

The improved semantic understanding of vision-language pretrained (VLP) models has made it increasingly difficult to protect publicly posted images from being exploited by search engines and other similar tools. In this context, this paper seeks to protect users' privacy by implementing defenses at the image compression stage to prevent exploitation. Specifically, we propose a flexible coding method, termed Privacy-Shielded Image Compression (PSIC), that can produce bitstreams with multiple decoding options. By default, the bitstream is decoded to preserve satisfactory perceptual quality while preventing interpretation by VLP models. Our method also retains the original image compression functionality. With a customizable input condition, the proposed scheme can reconstruct the image that preserves its full semantic information. A Conditional Latent Trigger Generation (CLTG) module is proposed to produce bias information based on customizable conditions to guide the decoding process into different reconstructed versions, and an Uncertainty-Aware Encryption-Oriented (UAEO) optimization function is designed to leverage the soft labels inferred from the target VLP model's uncertainty on the training data. This paper further incorporates an adaptive multi-objective optimization strategy to obtain improved encrypting performance and perceptual quality simultaneously within a unified training process. The proposed scheme is plug-and-play and can be seamlessly integrated into most existing Learned Image Compression (LIC) models. Extensive experiments across multiple downstream tasks have demonstrated the effectiveness of our design.
ADHMR: Aligning Diffusion-based Human Mesh Recovery via Direct Preference Optimization
Venue: Conference ICML 2025
Year: 2025

Human mesh recovery (HMR) from a single image is inherently ill-posed due to depth ambiguity and occlusions. Probabilistic methods have tried to solve this by generating numerous plausible 3D human mesh predictions, but they often exhibit misalignment with 2D image observations and weak robustness to in-the-wild images. To address these issues, we propose ADHMR, a framework that Aligns a Diffusion-based HMR model in a preference optimization manner. First, we train a human mesh prediction assessment model, HMR-Scorer, capable of evaluating predictions even for in-the-wild images without 3D annotations. We then use HMR-Scorer to create a preference dataset, where each input image has a pair of winner and loser mesh predictions. This dataset is used to finetune the base model using direct preference optimization. Moreover, HMR-Scorer also helps improve existing HMR models by data cleaning, even with fewer training samples. Extensive experiments show that ADHMR outperforms current state-of-the-art methods. Code is available at: https://github.com/shenwenhao01/ADHMR.
On the Training Convergence of Transformers for In-Context Classification of Gaussian Mixtures
Venue: Conference ICML 2025
Year: 2025

Although transformers have demonstrated impressive capabilities for in-context learning (ICL) in practice, theoretical understanding of the underlying mechanism that allows transformers to perform ICL is still in its infancy. This work aims to theoretically study the training dynamics of transformers for in-context classification tasks. We demonstrate that, for in-context classification of Gaussian mixtures under certain assumptions, a single-layer transformer trained via gradient descent converges to a globally optimal model at a linear rate. We further quantify the impact of the training and testing prompt lengths on the ICL inference error of the trained transformer. We show that when the lengths of training and testing prompts are sufficiently large, the prediction of the trained transformer approaches the ground truth distribution of the labels. Experimental results corroborate the theoretical findings.