OpenRaiser/Intern-Atlas huggingface dataset:
STree: Speculative Tree Decoding for Hybrid State Space Models
Venue: Conference NeurIPS 2025
Year: 2025

Speculative decoding is a technique to leverage hardware concurrency in order to enable multiple steps of token generation in a single forward pass, thus improving the efficiency of large-scale autoregressive (AR) Transformer models. State-space models (SSMs) are already more efficient than AR Transformers, since their state summarizes all past data with no need to cache or re-process tokens in the sliding window context. However, their state can also comprise thousands of tokens; so, speculative decoding has recently been extended to SSMs. Existing approaches, however, do not leverage the tree-based verification methods, since current SSMs lack the means to compute a token tree efficiently. We propose the first scalable algorithm to perform tree-based speculative decoding in state-space models (SSMs) and hybrid architectures of SSMs and Transformer layers. We exploit the structure of accumulated state transition matrices to facilitate tree-based speculative decoding with minimal overhead relative to current SSM implementations. Along with the algorithm, we describe a hardware-aware implementation that improves naive application of AR Transformer tree-based speculative decoding methods to SSMs. Furthermore, we outperform vanilla speculative decoding with SSMs even with a baseline drafting model and tree structure on three different benchmarks, opening up opportunities for further speed up with SSM and hybrid model inference. Code can be found at: https://github.com/wyc1997/stree.
Amortized Inference of Causal Models via Conditional Fixed-Point Iterations
Venue: Conference NeurIPS 2025
Year: 2025

Structural Causal Models (SCMs) offer a principled framework to reason about interventions and support out-of-distribution generalization, which are key goals in scientific discovery. However, the task of learning SCMs from observed data poses formidable challenges, and often requires training a separate model for each dataset. In this work, we propose amortized inference of SCMs by training a single model on multiple datasets sampled from different SCMs. We first use a transformer-based architecture for amortized learning of dataset embeddings, and then extend the Fixed-Point Approach (FiP) (Scetbon et al.) to infer SCMs conditionally on their dataset embeddings. As a byproduct, our method can generate observational and interventional data from novel SCMs at inference time, without updating parameters. Empirical results show that our amortized procedure performs on par with baselines trained specifically for each dataset on both in and out-of-distribution problems, and also outperforms them in scare data regimes.
From Attention to Atoms: Spectral Dictionary Learning for Fast, Interpretable Language Models}
Venue: Conference NeurIPS 2025
Year: 2025

We propose a novel spectral generative modeling framework for natural language processing that jointly learns a global time varying Fourier dictionary and per token mixing coefficients, replacing the ubiquitous self attention mechanism in transformer architectures. By enforcing reconstruction losses in both the time domain (embedding reconstruction) and the frequency domain (via Short Time Fourier Transform magnitude matching) alongside a standard language modeling objective, and fitting a Gaussian Mixture Model (GMM) prior over the learned mixing vectors, our approach achieves competitive perplexity and generation quality on standard benchmarks such as WikiText2 and Penn Treebank. In contrast to the quadratic computation complexity of self attention, our method operates with linear complexity, delivering substantial efficiency gains. We demonstrate that spectral dictionary models can achieve competitive performance compared to transformer baselines while significantly reducing inference latency and memory footprint, offering a compelling alternative for scalable language modeling.
SAVVY: Spatial Awareness via Audio-Visual LLMs through Seeing and Hearing
Venue: Conference NeurIPS 2025
Year: 2025

3D spatial reasoning in dynamic, audio-visual environments is a cornerstone of human cognition yet remains largely unexplored by existing Audio-Visual Large Language Models (AV-LLMs) and benchmarks, which predominantly focus on static or 2D scenes. We introduce SAVVY-Bench, the first benchmark for 3D spatial reasoning in dynamic scenes with synchronized spatial audio. SAVVY-Bench is comprised of thousands of relationships involving static and moving objects, and requires fine-grained temporal grounding, consistent 3D localization, and multi-modal annotation. To tackle this challenge, we propose SAVVY, a novel training-free reasoning pipeline that consists of two stages: (i) Egocentric Spatial Tracks Estimation, which leverages AV-LLMs as well as other audio-visual methods to track the trajectories of key objects related to the query using both visual and spatial audio cues, and (ii) Dynamic Global Map Construction, which aggregates multi-modal queried object trajectories and converts them into a unified global dynamic map. Using the constructed map, a final QA answer is obtained through a coordinate transformation that aligns the global map with the queried viewpoint. Empirical evaluation demonstrates that SAVVY substantially enhances performance of state-of-the-art AV-LLMs, setting a new standard and stage for approaching dynamic 3D spatial reasoning in AV-LLMs.
Revisiting Semi-Supervised Learning in the Era of Foundation Models
Venue: Conference NeurIPS 2025
Year: 2025

Semi-supervised learning (SSL) leverages abundant unlabeled data alongside limited labeled data to enhance learning. As vision foundation models (VFMs) increasingly serve as the backbone of vision applications, it remains unclear how SSL interacts with these pre-trained models. To address this gap, we develop new SSL benchmark datasets where frozen VFMs underperform and systematically evaluate representative SSL methods. We make a surprising observation: parameter-efficient fine-tuning (PEFT) using only labeled data often matches SSL performance, even without leveraging unlabeled data. This motivates us to revisit self-training, a conceptually simple SSL baseline, where we use the supervised PEFT model to pseudo-label unlabeled data for further training. To overcome the notorious issue of noisy pseudo-labels, we propose ensembling multiple PEFT approaches and VFM backbones to produce more robust pseudo-labels. Empirical results validate the effectiveness of this simple yet powerful approach, providing actionable insights into SSL with VFMs and paving the way for more scalable and practical semi-supervised learning in the era of foundation models.
From Counterfactuals to Trees: Competitive Analysis of Model Extraction Attacks
Venue: Conference NeurIPS 2025
Year: 2025

The advent of Machine Learning as a Service (MLaaS) has heightened the trade-off between model explainability and security. In particular, explainability techniques, such as counterfactual explanations, inadvertently increase the risk of model extraction attacks, enabling unauthorized replication of proprietary models. In this paper, we formalize and characterize the risks and inherent complexity of model reconstruction, focusing on the "oracle'' queries required for faithfully inferring the underlying prediction function. We present the first formal analysis of model extraction attacks through the lens of competitive analysis, establishing a foundational framework to evaluate their efficiency. Focusing on models based on additive decision trees (e.g., decision trees, gradient boosting, and random forests), we introduce novel reconstruction algorithms that achieve provably perfect fidelity while demonstrating strong anytime performance. Our framework provides theoretical bounds on the query complexity for extracting tree-based model, offering new insights into the security vulnerabilities of their deployment.
R$^2$ec: Towards Large Recommender Models with Reasoning
Venue: Conference NeurIPS 2025
Year: 2025

Large recommender models have extended LLMs as powerful recommenders via encoding or item generation, and recent breakthroughs in LLM reasoning synchronously motivate the exploration of reasoning in recommendation. In this work, we propose R$^2$ec, a unified large recommender model with intrinsic reasoning capability. R$^2$ec introduces a dual-head architecture that supports both reasoning chain generation and efficient item prediction in a single model, significantly reducing inference latency. To overcome the lack of annotated reasoning data, we design RecPO, a reinforcement learning framework that optimizes reasoning and recommendation jointly with a novel fused reward mechanism. Extensive experiments on three datasets demonstrate that R$^2$ec outperforms traditional, LLM-based, and reasoning-augmented recommender baselines, while further analyses validate its competitive efficiency among conventional LLM-based recommender baselines and strong adaptability to diverse recommendation scenarios. Code and checkpoints available at https://github.com/YRYangang/RRec.
ODG: Occupancy Prediction Using Dual Gaussians
Venue: Conference NeurIPS 2025
Year: 2025

Occupancy prediction infers fine-grained 3D geometry and semantics from camera images of the surrounding environment, making it a critical perception task for autonomous driving. Existing methods either adopt dense grids as scene representation, which is difficult to scale to high resolution, or learn the entire scene using a single set of sparse queries, which is insufficient to handle the various object characteristics. In this paper, we present ODG, a hierarchical dual sparse Gaussian representation to effectively capture complex scene dynamics. Building upon the observation that driving scenes can be universally decomposed into static and dynamic counterparts, we define dual Gaussian queries to better model the diverse scene objects. We utilize a hierarchical Gaussian transformer to predict the occupied voxel centers and semantic classes along with the Gaussian parameters. Leveraging the real-time rendering capability of 3D Gaussian Splatting, we also impose rendering supervision with available depth and semantic map annotations injecting pixel-level alignment to boost occupancy learning. Extensive experiments on the Occ3D-nuScenes and Occ3D-Waymo benchmarks demonstrate our proposed method sets new state-of-the-art results while maintaining low inference cost.
Robust Federated Finetuning of LLMs via Alternating Optimization of LoRA
Venue: Conference NeurIPS 2025
Year: 2025

Parameter-Efficient Fine-Tuning (PEFT) methods like Low-Rank Adaptation (LoRA) optimize federated training by reducing computational and communication costs. We propose RoLoRA, a federated framework using alternating optimization to fine-tune LoRA adapters. Our approach emphasizes the importance of learning up and down projection matrices to enhance expressiveness and robustness. We use both theoretical analysis and extensive experiments to demonstrate the advantages of RoLoRA over prior approaches that either generate imperfect model updates or limit expressiveness of the model. We provide a theoretical analysis on a linear model to highlight the importance of learning both the down-projection and up-projection matrices in LoRA. We validate the insights on a non-linear model and separately provide a convergence proof under general conditions. To bridge theory and practice, we conducted extensive experimental evaluations on language models including RoBERTa-Large, Llama-2-7B on diverse tasks and FL settings to demonstrate the advantages of RoLoRA over other methods.
Shape it Up! Restoring LLM Safety during Finetuning
Venue: Conference NeurIPS 2025
Year: 2025

Finetuning large language models (LLMs) enables user-specific customization but introduces critical safety risks: even a few harmful examples can compromise safety alignment. A common mitigation strategy is to update the model more strongly on examples deemed safe, while downweighting or excluding those flagged as unsafe. However, because safety context can shift within a single example, updating the model equally on both harmful and harmless parts of a response is suboptimal-a coarse treatment we term static safety shaping. In contrast, we propose dynamic safety shaping (DSS), a framework that uses fine-grained safety signals to reinforce learning from safe segments of a response while suppressing unsafe content. To enable such fine-grained control during finetuning, we introduce a key insight: guardrail models, traditionally used for filtering, can be repurposed to evaluate partial responses, tracking how safety risk evolves throughout the response, segment by segment. This leads to the Safety Trajectory Assessment of Response (STAR), a token-level signal that enables shaping to operate dynamically over the training sequence. Building on this, we present STAR-DSS, guided by STAR scores, that robustly mitigates finetuning risks and delivers substantial safety improvements across diverse threats, datasets, and model families-all without compromising capability on intended tasks. We encourage future safety research to build on dynamic shaping principles for stronger mitigation against evolving finetuning risks. Our code is publicly available at https://github.com/poloclub/star-dss.
Language Models Can Predict Their Own Behavior
Venue: Conference NeurIPS 2025
Year: 2025

The text produced by language models (LMs) can exhibit specific `behaviors,' such as a failure to follow alignment training, that we hope to detect and react to during deployment. Identifying these behaviors can often only be done post facto, i.e., after the entire text of the output has been generated. We provide evidence that there are times when we can predict how an LM will behave early in computation, before even a single token is generated. We show that probes trained on the internal representation of input tokens alone can predict a wide range of eventual behaviors over the entire output sequence. Using methods from conformal prediction, we provide provable bounds on the estimation error of our probes, creating precise early warning systems for these behaviors. The conformal probes can identify instances that will trigger alignment failures (jailbreaking) and instruction-following failures, without requiring a single token to be generated. An early warning system built on the probes reduces jailbreaking by 91%. Our probes also show promise in pre-emptively estimating how confident the model will be in its response, a behavior that cannot be detected using the output text alone. Conformal probes can preemptively estimate the final prediction of an LM that uses Chain-of-Thought (CoT) prompting, hence accelerating inference. When applied to an LM that uses CoT to perform text classification, the probes drastically reduce inference costs (65% on average across 27 datasets), with negligible accuracy loss. Encouragingly, probes generalize to unseen datasets and perform better on larger models, suggesting applicability to the largest of models in real-world settings.
Exploring Structural Degradation in Dense Representations for Self-supervised Learning
Venue: Conference NeurIPS 2025
Year: 2025

In this work, we observe a counterintuitive phenomenon in self-supervised learning (SSL): longer training may impair the performance of dense prediction tasks (e.g., semantic segmentation). We refer to this phenomenon as Self-supervised Dense Degradation (SDD) and demonstrate its consistent presence across sixteen state-of-the-art SSL methods with various losses, architectures, and datasets. When the model performs suboptimally on dense tasks at the end of training, measuring the performance during training becomes essential. However, evaluating dense performance effectively without annotations remains an open challenge. To tackle this issue, we introduce a Dense representation Structure Estimator (DSE), composed of a class-relevance measure and an effective dimensionality measure. The proposed DSE is both theoretically grounded and empirically validated to be closely correlated with the downstream performance. Based on this metric, we introduce a straightforward yet effective model selection strategy and a DSE-based regularization method. Experiments on sixteen SSL methods across four benchmarks confirm that model selection improves mIoU by $3.0\%$ on average with negligible computational cost. Additionally, DSE regularization consistently mitigates the effects of dense degradation. Code is available at https://github.com/EldercatSAM/SSL-Degradation.
Repo2Run: Automated Building Executable Environment for Code Repository at Scale
Venue: Conference NeurIPS 2025
Year: 2025

Scaling up executable code data is significant for improving language models' software engineering capability. The intricate nature of the process makes it labor-intensive, time-consuming and expert-knowledge-dependent to build a large number of executable code repositories, limiting the scalability of existing work based on running tests. The primary bottleneck lies in the automated building of test environments for different repositories, which is an essential yet underexplored task. To mitigate the gap, we introduce Repo2Run, the first LLM-based agent aiming at automating the building of executable test environments for any repositories at scale. Specifically, given a code repository, Repo2Run iteratively builds the Docker image, runs unit tests based on the feedback of the building, and synthesizes the Dockerfile until the entire pipeline is executed successfully. The resulting Dockerfile can then be used to create Docker container environments for running code and tests. We created a benchmark containing 420 Python repositories with unit tests for evaluation. The results illustrate that Repo2Run achieves an 86.0% success rate, outperforming SWE-agent by 77.0%. The resources of Repo2Run are available at https://github.com/bytedance/Repo2Run.
MetaFind: Scene-Aware 3D Asset Retrieval for Coherent Metaverse Scene Generation
Venue: Conference NeurIPS 2025
Year: 2025

We present MetaFind, a scene-aware tri-modal compositional retrieval framework designed to enhance scene generation in the metaverse by retrieving 3D assets from large-scale repositories. MetaFind addresses two core challenges: (i) inconsistent asset retrieval that overlooks spatial, semantic, and stylistic constraints, and (ii) the absence of a standardized retrieval paradigm specifically tailored for 3D asset retrieval, as existing approaches mainly rely on general-purpose 3D shape representation models. Our key innovation is a flexible retrieval mechanism that supports arbitrary combinations of text, image, and 3D modalities as queries, enhancing spatial reasoning and style consistency by jointly modeling object-level features (including appearance) and scene-level layout structures. Methodologically, MetaFind introduces a plug-and-play equivariant layout encoder ESSGNN that captures spatial relationships and object appearance features, ensuring retrieved 3D assets are contextually and stylistically coherent with the existing scene, regardless of coordinate frame transformations. The framework supports iterative scene construction by continuously adapting retrieval results to current scene updates. Empirical evaluations demonstrate the improved spatial and stylistic consistency of MetaFind in various retrieval tasks compared to baseline methods.
CAML: Collaborative Auxiliary Modality Learning for Multi-Agent Systems
Venue: Conference NeurIPS 2025
Year: 2025

Multi-modal learning has emerged as a key technique for improving performance across domains such as autonomous driving, robotics, and reasoning. However, in certain scenarios, particularly in resource-constrained environments, some modalities available during training may be absent during inference. While existing frameworks effectively utilize multiple data sources during training and enable inference with reduced modalities, they are primarily designed for single-agent settings. This poses a critical limitation in dynamic environments such as connected autonomous vehicles (CAV), where incomplete data coverage can lead to decision-making blind spots. Conversely, some works explore multi-agent collaboration but without addressing missing modality at test time. To overcome these limitations, we propose Collaborative Auxiliary Modality Learning (CAML), a novel multi-modal multi-agent framework that enables agents to collaborate and share multi-modal data during training, while allowing inference with reduced modalities during testing. Experimental results in collaborative decision-making for CAV in accident-prone scenarios demonstrate that CAML achieves up to a 58.1% improvement in accident detection. Additionally, we validate CAML on real-world aerial-ground robot data for collaborative semantic segmentation, achieving up to a 10.6% improvement in mIoU.
RULE: Reinforcement UnLEarning Achieves Forget-retain Pareto Optimality
Venue: Conference NeurIPS 2025
Year: 2025

The widespread deployment of Large Language Models (LLMs) trained on massive, uncurated corpora has raised growing concerns about the inclusion of sensitive, copyrighted, or illegal content. This has led to increasing interest in LLM unlearning: the task of selectively removing specific information from a model without retraining from scratch or degrading overall utility. However, existing methods often rely on large-scale forget and retain datasets, and suffer from unnatural responses, poor generalization, or catastrophic utility loss. In this work, we propose Reinforcement UnLearning (RULE), an efficient framework that formulates unlearning as a refusal boundary optimization problem. RULE is trained with a small portion of the forget set and synthesized boundary queries, using a verifiable reward function that encourages safe refusal on forget--related queries while preserving helpful responses on permissible inputs. We provide both theoretical and empirical evidence demonstrating the effectiveness of RULE in achieving targeted unlearning without compromising model utility. Experimental results show that, with only $12%$ forget set and $8%$ synthesized boundary data, RULE outperforms existing baselines by up to $17.5%$ forget quality and $16.3%$ naturalness response while maintaining general utility, achieving forget--retain Pareto optimality. Remarkably, we further observe that RULE improves the naturalness of model outputs, enhances training efficiency, and exhibits strong generalization ability, generalizing refusal behavior to semantically related but unseen queries.