OpenRaiser/Intern-Atlas huggingface dataset:
TracSum: A New Benchmark for Aspect-Based Summarization with Sentence-Level Traceability in Medical Domain
Venue: Conference EMNLP 2025
Year: 2025

While document summarization with LLMs has enhanced access to textual information, concerns about the factual accuracy of these summaries persist, especially in the medical domain. Tracing evidence from which summaries are derived enables users to assess their accuracy, thereby alleviating this concern. In this paper, we introduce TracSum, a novel benchmark for traceable, aspect-based summarization, in which generated summaries are paired with sentence-level citations, enabling users to trace back to the original context. First, we annotate 500 medical abstracts for seven key medical aspects, yielding 3.5K summary-citation pairs. We then propose a fine-grained evaluation framework for this new task, designed to assess the completeness and consistency of generated content using four metrics. Finally, we introduce a summarization pipeline, Track-Then-Sum, which serves as a baseline method for comparison. In experiments, we evaluate both this baseline and a set of LLMs on TracSum, and conduct a human evaluation to assess the evaluation results. The findings demonstrate that TracSum can serve as an effective benchmark for traceable, aspect-based summarization tasks. We also observe that explicitly performing sentence-level tracking prior to summarization enhances generation accuracy, while incorporating the full context further improves completeness.
Context Reasoner: Incentivizing Reasoning Capability for Contextualized Privacy and Safety Compliance via Reinforcement Learning
Venue: Conference EMNLP 2025
Year: 2025

While Large Language Models (LLMs) exhibit remarkable capabilities, they also introduce significant safety and privacy risks. Current mitigation strategies often fail to preserve contextual reasoning capabilities in risky scenarios. Instead, they rely heavily on sensitive pattern matching to protect LLMs, which limits the scope. Furthermore, they overlook established safety and privacy standards, leading to systemic risks for legal compliance. To address these gaps, we formulate safety and privacy issues into contextualized compliance problems following the Contextual Integrity (CI) theory. Under the CI framework, we align our model with three critical regulatory standards: GDPR, EU AI Act, and HIPAA. Specifically, we employ reinforcement learning (RL) with a rule-based reward to incentivize contextual reasoning capabilities while enhancing compliance with safety and privacy norms. Through extensive experiments, we demonstrate that our method not only significantly enhances legal compliance (achieving a +8.58% accuracy improvement in safety/privacy benchmarks) but also further improves general reasoning capability. For OpenThinker-7B, a strong reasoning model that significantly outperforms its base model Qwen2.5-7B-Instruct across diverse subjects, our method enhances its general reasoning capabilities, with +2.05% and +8.98% accuracy improvement on the MMLU and LegalBench benchmark, respectively.
SLoW: Select Low-frequency Words! Automatic Dictionary Selection for Translation on Large Language Models
Venue: Conference EMNLP 2025
Year: 2025

There are more than 7,000 languages around the world, and current Large Language Models (LLMs) only support hundreds of languages. Dictionary-based prompting methods can enhance translation on them, but most methods use all the available dictionaries, which could be expensive. Instead, it will be flexible to have a trade-off between token consumption and translation performance. This paper proposes a novel task called \textbf{A}utomatic \textbf{D}ictionary \textbf{S}election (\textbf{ADS}). The goal of the task is to automatically select which dictionary to use to enhance translation. We propose a novel and effective method which we call \textbf{S}elect \textbf{Lo}w-frequency \textbf{W}ords! (\textbf{SLoW}) which selects those dictionaries that have a lower frequency. Our methods have unique advantages. First, there is no need for access to the training data for frequency estimation (which is usually unavailable). Second, it inherits the advantage of dictionary-based methods, where no additional tuning is required on LLMs. Experimental results on 100 languages from FLORES indicate that SLoW surpasses strong baselines, and it can obviously save token usage, with many languages even surpassing the translation performance of the full dictionary baseline.\footnote{A shocking fact is that there is no need to use the actual training data (often unobtainable) for frequency estimation, and an estimation frequency obtained using public resources is still apparently effective in improving translation with ChatGPT and Llama, and DeepSeek.}\footnote{Code and data available upon publication.}
EQA-RM: A Generative Embodied Reward Model with Test-time Scaling
Venue: Conference EMNLP 2025
Year: 2025

Reward Models (RMs), vital for large model alignment, are underexplored for complex embodied tasks like Embodied Question Answering (EQA) where nuanced evaluation of agents' spatial, temporal, and logical understanding is critical yet not considered by generic approaches. We introduce EQA-RM, a novel generative multimodal reward model specifically architected for EQA, trained via our innovative Contrastive Group Relative Policy Optimization (C-GRPO) strategy to learn fine-grained behavioral distinctions. The generative nature of EQA-RM provides interpretable, structured reward feedback (beyond simple scalars), uniquely enabling test-time scaling to dynamically adjust evaluation granularity, from concise scores to detailed critiques of reasoning and grounding, at inference without retraining. Concurrently, we introduce EQARewardBench, a new benchmark built on OpenEQA for standardized EQA reward model assessment. Demonstrating high sample efficiency, EQA-RM (fine-tuning Qwen2-VL-2B-Instruct) achieves 61.9\% accuracy on EQA-RM-Bench with only 700 samples, outperforming strong proprietary baselines, including Gemini-2.5-Flash, GPT-4o, Claude-3.5-Haiku, and open-sourced state-of-the-art models such as RoVRM and VisualPRM. The code and dataset can be found here https://github.com/UNITES-Lab/EQA-RM.
OmniThink: Expanding Knowledge Boundaries in Machine Writing through Thinking
Venue: Conference EMNLP 2025
Year: 2025

Machine writing with large language models often relies on retrieval-augmented generation. However, these approaches remain confined within the boundaries of the model's predefined scope, limiting the generation of content with rich information. Specifically, vanilla-retrieved information tends to lack depth, novelty, and suffers from redundancy, which negatively impacts the quality of generated articles, leading to shallow, unoriginal, and repetitive outputs. To address these issues, we propose OmniThink, a slow-thinking machine writing framework that emulates the human-like process of iterative expansion and reflection. The core idea behind OmniThink is to simulate the cognitive behavior of learners as they slowly deepen their knowledge of the topics. Experimental results demonstrate that OmniThink improves the knowledge density of generated articles without compromising metrics such as coherence and depth. Human evaluations and expert feedback further highlight the potential of OmniThink to address real-world challenges in the generation of long-form articles. Code is available at https://github.com/zjunlp/OmniThink.
LinkAlign: Scalable Schema Linking for Real-World Large-Scale Multi-Database Text-to-SQL
Venue: Conference EMNLP 2025
Year: 2025

Schema linking is a critical bottleneck in applying existing Text-to-SQL models to real-world, large-scale, multi-database environments. Through error analysis, we identify two major challenges in schema linking: (1) Database Retrieval: accurately selecting the target database from a large schema pool, while effectively filtering out irrelevant ones; and (2) Schema Item Grounding: precisely identifying the relevant tables and columns within complex and often redundant schemas for SQL generation. Based on these, we introduce LinkAlign, a novel framework tailored for large-scale databases with thousands of fields. LinkAlign comprises three key steps: multi-round semantic enhanced retrieval and irrelevant information isolation for Challenge 1, and schema extraction enhancement for Challenge 2. Each stage supports both Agent and Pipeline execution modes, enabling balancing efficiency and performance via modular design. To enable more realistic evaluation, we construct AmbiDB, a synthetic dataset designed to reflect the ambiguity of real-world schema linking. Experiments on widely-used Text-to-SQL benchmarks demonstrate that LinkAlign consistently outperforms existing baselines on all schema linking metrics. Notably, it improves the overall Text-to-SQL pipeline and achieves a new state-of-the-art score of 33.09% on the Spider 2.0-Lite benchmark using only open-source LLMs, ranking first on the leaderboard at the time of submission. The codes are available at https://github.com/Satissss/LinkAlign
On Relation-Specific Neurons in Large Language Models
Venue: Conference EMNLP 2025
Year: 2025

In large language models (LLMs), certain \emph{neurons} can store distinct pieces of knowledge learned during pretraining. While factual knowledge typically appears as a combination of \emph{relations} and \emph{entities}, it remains unclear whether some neurons focus on a relation itself -- independent of any entity. We hypothesize such neurons \emph{detect} a relation in the input text and \emph{guide} generation involving such a relation. To investigate this, we study the LLama-2 family on a chosen set of relations, with a \textit{statistics}-based method. Our experiments demonstrate the existence of relation-specific neurons. We measure the effect of selectively deactivating candidate neurons specific to relation $r$ on the LLM's ability to handle (1) facts involving relation $r$ and (2) facts involving a different relation $r' \neq r$. With respect to their capacity for encoding relation information, we give evidence for the following three properties of relation-specific neurons. \textbf{(i) Neuron cumulativity.} Multiple neurons jointly contribute to processing facts involving relation $r$, with no single neuron fully encoding a fact in $r$ on its own. \textbf{(ii) Neuron versatility.} Neurons can be shared across multiple closely related as well as less related relations. In addition, some relation neurons transfer across languages. \textbf{(iii) Neuron interference.} Deactivating neurons specific to one relation can improve LLMs' factual recall performance for facts of other relations. We make our code and data publicly available at https://github.com/cisnlp/relation-specific-neurons.
ProtoVQA: An Adaptable Prototypical Framework for Explainable Fine-Grained Visual Question Answering
Venue: Conference EMNLP 2025
Year: 2025

Visual Question Answering (VQA) is increasingly used in diverse applications ranging from general visual reasoning to safety-critical domains such as medical imaging and autonomous systems, where models must provide not only accurate answers but also explanations that humans can easily understand and verify. Prototype-based modeling has shown promise for interpretability by grounding predictions in semantically meaningful regions for purely visual reasoning tasks, yet remains underexplored in the context of VQA. We present ProtoVQA, a unified prototypical framework that (i) learns question-aware prototypes that serve as reasoning anchors, connecting answers to discriminative image regions, (ii) applies spatially constrained matching to ensure that the selected evidence is coherent and semantically relevant, and (iii) supports both answering and grounding tasks through a shared prototype backbone. To assess explanation quality, we propose the Visual-Linguistic Alignment Score (VLAS), which measures how well the model's attended regions align with ground-truth evidence. Experiments on Visual7W show that ProtoVQA yields faithful, fine-grained explanations while maintaining competitive accuracy, advancing the development of transparent and trustworthy VQA systems.
VC4VG: Optimizing Video Captions for Text-to-Video Generation
Venue: Conference EMNLP 2025
Year: 2025

Recent advances in text-to-video (T2V) generation highlight the critical role of high-quality video-text pairs in training models capable of producing coherent and instruction-aligned videos. However, strategies for optimizing video captions specifically for T2V training remain underexplored. In this paper, we introduce VC4VG (Video Captioning for Video Generation), a comprehensive caption optimization framework tailored to the needs of T2V models. We begin by analyzing caption content from a T2V perspective, decomposing the essential elements required for video reconstruction into multiple dimensions, and proposing a principled caption design methodology. To support evaluation, we construct VC4VG-Bench, a new benchmark featuring fine-grained, multi-dimensional, and necessity-graded metrics aligned with T2V-specific requirements. Extensive T2V fine-tuning experiments demonstrate a strong correlation between improved caption quality and video generation performance, validating the effectiveness of our approach. We release all benchmark tools and code at https://github.com/alimama-creative/VC4VG to support further research.
LaMP-QA: A Benchmark for Personalized Long-form Question Answering
Venue: Conference EMNLP 2025
Year: 2025

Personalization is essential for question answering systems that are user-centric. Despite its importance, personalization in answer generation has been relatively underexplored. This is mainly due to lack of resources for training and evaluating personalized question answering systems. We address this gap by introducing LaMP-QA -- a benchmark designed for evaluating personalized long-form answer generation. The benchmark covers questions from three major categories: (1) Arts & Entertainment, (2) Lifestyle & Personal Development, and (3) Society & Culture, encompassing over 45 subcategories in total. To assess the quality and potential impact of the LaMP-QA benchmark for personalized question answering, we conduct comprehensive human and automatic evaluations, to compare multiple evaluation strategies for evaluating generated personalized responses and measure their alignment with human preferences. Furthermore, we benchmark a number of non-personalized and personalized approaches based on open-source and proprietary large language models. Our results show that incorporating the personalized context provided leads to up to 39% performance improvements. The benchmark is publicly released to support future research in this area.
Skeletons Matter: Dynamic Data Augmentation for Text-to-Query
Venue: Conference EMNLP 2025
Year: 2025

The task of translating natural language questions into query languages has long been a central focus in semantic parsing. Recent advancements in Large Language Models (LLMs) have significantly accelerated progress in this field. However, existing studies typically focus on a single query language, resulting in methods with limited generalizability across different languages. In this paper, we formally define the Text-to-Query task paradigm, unifying semantic parsing tasks across various query languages. We identify query skeletons as a shared optimization target of Text-to-Query tasks, and propose a general dynamic data augmentation framework that explicitly diagnoses model-specific weaknesses in handling these skeletons to synthesize targeted training data. Experiments on four Text-to-Query benchmarks demonstrate that our method achieves state-of-the-art performance using only a small amount of synthesized data, highlighting the efficiency and generality of our approach and laying a solid foundation for unified research on Text-to-Query tasks. We release our code at https://github.com/jjjycaptain/Skeletron.
Learning from Few Samples: A Novel Approach for High-Quality Malcode Generation
Venue: Conference EMNLP 2025
Year: 2025

Intrusion Detection Systems (IDS) play a crucial role in network security defense. However, a significant challenge for IDS in training detection models is the shortage of adequately labeled malicious samples. To address these issues, this paper introduces a novel semi-supervised framework \textbf{GANGRL-LLM}, which integrates Generative Adversarial Networks (GANs) with Large Language Models (LLMs) to enhance malicious code generation and SQL Injection (SQLi) detection capabilities in few-sample learning scenarios. Specifically, our framework adopts a collaborative training paradigm where: (1) the GAN-based discriminator improves malicious pattern recognition through adversarial learning with generated samples and limited real samples; and (2) the LLM-based generator refines the quality of malicious code synthesis using reward signals from the discriminator. The experimental results demonstrate that even with a limited number of labeled samples, our training framework is highly effective in enhancing both malicious code generation and detection capabilities. This dual enhancement capability offers a promising solution for developing adaptive defense systems capable of countering evolving cyber threats.
VisualWebInstruct: Scaling up Multimodal Instruction Data through Web Search
Venue: Conference EMNLP 2025
Year: 2025

Vision-Language Models have made significant progress on many perception-focused tasks. However, their progress on reasoning-focused tasks remains limited due to the lack of high-quality and diverse training data. In this work, we aim to address the scarcity of reasoning-focused multimodal datasets. We propose VisualWebInstruct, a novel approach that leverages search engines to create a diverse and high-quality dataset spanning multiple disciplines, including mathematics, physics, finance, and chemistry, etc. Starting with a meticulously selected set of 30,000 seed images, we employ Google Image Search to identify websites containing similar images. We collect and process HTML data from over 700K unique URLs. Through a pipeline of content extraction, filtering, and synthesis, we construct a dataset of approximately 900K question-answer (QA) pairs, with 40% consisting of visual QA pairs and the remaining comprising text-based QA pairs. Models fine-tuned on VisualWebInstruct demonstrate significant performance improvements: (1) fine-tuning on Llava-OV results in 10-20 absolute points improvement across benchmarks, and (2) fine-tuning from MAmmoTH-VL yields a 5 absolute points gain across benchmarks. Our best model, MAmmoTH-VL2, achieves state-of-the-art performance within the 10B parameter class on MMMU-Pro (40.7), MathVerse (42.6), and DynaMath (55.7). These results highlight the effectiveness of our dataset in enhancing the reasoning capabilities of vision-language models for complex multimodal tasks.
Thinking Out Loud: Do Reasoning Models Know When They’re Right?
Venue: Conference EMNLP 2025
Year: 2025

Large reasoning models (LRMs) have recently demonstrated impressive capabilities in complex reasoning tasks by leveraging increased test-time computation and exhibiting behaviors reminiscent of human-like self-reflection. While LRMs show a clear capacity for valuable self-reflection, how this ability interacts with other model behaviors remains underexplored. We investigate this connection by analyzing verbalized confidence, how models articulate their certainty, as a lens into the nature of self-reflection in LRMs. We find that supervised fine-tuning on reasoning traces (i.e., distillation) and reinforcement learning can improve verbalized calibration in reasoning-intensive settings in a progressive, laddered fashion. However, our results also indicate that reasoning models may possess a diminished awareness of their own knowledge boundaries, as evidenced by significantly lower "I don't know" response rates on factuality benchmarks. Moreover, we examine the relationship between verbalized confidence and reasoning chains, finding that models tend to express higher confidence when providing shorter or less elaborate reasoning. Our findings highlight how reasoning-oriented training can enhance performance in reasoning-centric tasks while potentially incurring a "reasoning tax," a cost reflected in the model's reduced ability to accurately recognize the limits of its own knowledge in small-scale models. More broadly, our work showcases how this erosion of knowledge boundaries can compromise model faithfulness, as models grow more confident without a commensurate understanding of when they should abstain.
Seeing is Believing, but How Much? A Comprehensive Analysis of Verbalized Calibration in Vision-Language Models
Venue: Conference EMNLP 2025
Year: 2025

Uncertainty quantification is essential for assessing the reliability and trustworthiness of modern AI systems. Among existing approaches, verbalized uncertainty, where models express their confidence through natural language, has emerged as a lightweight and interpretable solution in large language models (LLMs). However, its effectiveness in vision-language models (VLMs) remains insufficiently studied. In this work, we conduct a comprehensive evaluation of verbalized confidence in VLMs, spanning three model categories, four task domains, and three evaluation scenarios. Our results show that current VLMs often display notable miscalibration across diverse tasks and settings. Notably, visual reasoning models (i.e., thinking with images) consistently exhibit better calibration, suggesting that modality-specific reasoning is critical for reliable uncertainty estimation. To further address calibration challenges, we introduce Visual Confidence-Aware Prompting, a two-stage prompting strategy that improves confidence alignment in multimodal settings. Overall, our study highlights the inherent miscalibration in VLMs across modalities. More broadly, our findings underscore the fundamental importance of modality alignment and model faithfulness in advancing reliable multimodal systems.
MEBench: Benchmarking Large Language Models for Cross-Document Multi-Entity Question Answering
Venue: Conference EMNLP 2025
Year: 2025

Multi-entity question answering (MEQA) represents significant challenges for large language models (LLM) and retrieval-augmented generation (RAG) systems, which frequently struggle to consolidate scattered information across diverse documents. While existing methods excel at single-document comprehension, they often struggle with cross-document aggregation, particularly when resolving entity-dense questions like "What is the distribution of ACM Fellows among various fields of study?", which require integrating entity-centric insights from heterogeneous sources (e.g., Wikipedia pages). To address this gap, we introduce MEBench, a novel multi-document, multi-entity benchmark designed to systematically evaluate LLMs' capacity to retrieve, consolidate, and reason over fragmented information. Our benchmark comprises 4,780 questions which are systematically categorized into three primary categories, further divided into eight distinct types, ensuring broad coverage of real-world multi-entity reasoning scenarios. Our experiments on state-of-the-art LLMs (e.g., GPT-4, Llama-3) and RAG pipelines reveal critical limitations: even advanced models achieve only 59% accuracy on MEBench. Our benchmark emphasizes the importance of completeness and factual precision of information extraction in MEQA tasks, using Entity-Attributed F1 (EA-F1) metric for granular evaluation of entity-level correctness and attribution validity. MEBench not only highlights systemic weaknesses in current LLM frameworks but also provides a foundation for advancing robust, entity-aware QA architectures.