OpenRaiser/Intern-Atlas huggingface dataset:
Micro-Macro Spatial-Temporal Graph-Based Encoder-Decoder for Map-Constrained Trajectory Recovery
Venue: Journal TKDE 2024
Year: 2024

Recovering intermediate missing GPS points in a sparse trajectory, while adhering to the constraints of the road network, could offer deep insights into users' moving behaviors in intelligent transportation systems. Although recent studies have demonstrated the advantages of achieving map-constrained trajectory recovery via an end-to-end manner, they still face two significant challenges. Firstly, existing methods are mostly sequence-based models. It is extremely hard for them to comprehensively capture the micro-semantics of individual trajectory, including the information of each GPS point and the movement between two GPS points. Secondly, existing approaches ignore the impact of the macro-semantics, i.e., the road conditions and the people's shared travel preferences reflected by a group of trajectories. To address the above challenges, we propose a Micro-Macro Spatial-Temporal Graph-based Encoder-Decoder (MM-STGED). Specifically, we model each trajectory as a graph to efficiently describe the micro-semantics of trajectory and design a novel message-passing mechanism to learn trajectory representations. Additionally, we extract the macro-semantics of trajectories and further incorporate them into a well-designed graph-based decoder to guide trajectory recovery. Extensive experiments conducted on sparse trajectories with three different sampling intervals that are respectively constructed from two real-world trajectory datasets demonstrate the superiority of our proposed model.
Bi-Level Graph Structure Learning for Next POI Recommendation
Venue: Journal TKDE 2024
Year: 2024

Next point-of-interest (POI) recommendation aims to predict a user's next destination based on sequential check-in history and a set of POI candidates. Graph neural networks (GNNs) have demonstrated a remarkable capability in this endeavor by exploiting the extensive global collaborative signals present among POIs. However, most of the existing graph-based approaches construct graph structures based on pre-defined heuristics, failing to consider inherent hierarchical structures of POI features such as geographical locations and visiting peaks, or suffering from noisy and incomplete structures in graphs. To address the aforementioned issues, this paper presents a novel Bi-level Graph Structure Learning (BiGSL) for next POI recommendation. BiGSL first learns a hierarchical graph structure to capture the fine-to-coarse connectivity between POIs and prototypes, and then uses a pairwise learning module to dynamically infer relationships between POI pairs and prototype pairs. Based on the learned bi-level graphs, our model then employs a multi-relational graph network that considers both POI- and prototype-level neighbors, resulting in improved POI representations. Our bi-level structure learning scheme is more robust to data noise and incompleteness, and improves the exploration ability for recommendation by alleviating sparsity issues. Experimental results on three real-world datasets demonstrate the superiority of our model over existing state-of-the-art methods, with a significant improvement in recommendation accuracy and exploration performance.
Revisiting Few-Shot Learning From a Causal Perspective
Venue: Journal TKDE 2024
Year: 2024

Few-shot learning with $N$-way $K$-shot scheme is an open challenge in machine learning. Many metric-based approaches have been proposed to tackle this problem, e.g., the Matching Networks and CLIP-Adapter. Despite that these approaches have shown significant progress, the mechanism of why these methods succeed has not been well explored. In this paper, we try to interpret these metric-based few-shot learning methods via causal mechanism. We show that the existing approaches can be viewed as specific forms of front-door adjustment, which can alleviate the effect of spurious correlations and thus learn the causality. This causal interpretation could provide us a new perspective to better understand these existing metric-based methods. Further, based on this causal interpretation, we simply introduce two causal methods for metric-based few-shot learning, which considers not only the relationship between examples but also the diversity of representations. Experimental results demonstrate the superiority of our proposed methods in few-shot classification on various benchmark datasets. Code is available in https://github.com/lingl1024/causalFewShot.
Transductive Reward Inference on Graph
Venue: Journal TKDE 2024
Year: 2024

In this study, we present a transductive inference approach on that reward information propagation graph, which enables the effective estimation of rewards for unlabelled data in offline reinforcement learning. Reward inference is the key to learning effective policies in practical scenarios, while direct environmental interactions are either too costly or unethical and the reward functions are rarely accessible, such as in healthcare and robotics. Our research focuses on developing a reward inference method based on the contextual properties of information propagation on graphs that capitalizes on a constrained number of human reward annotations to infer rewards for unlabelled data. We leverage both the available data and limited reward annotations to construct a reward propagation graph, wherein the edge weights incorporate various influential factors pertaining to the rewards. Subsequently, we employ the constructed graph for transductive reward inference, thereby estimating rewards for unlabelled data. Furthermore, we establish the existence of a fixed point during several iterations of the transductive inference process and demonstrate its at least convergence to a local optimum. Empirical evaluations on locomotion and robotic manipulation tasks validate the effectiveness of our approach. The application of our inferred rewards improves the performance in offline reinforcement learning tasks.
Scene-Driven Multimodal Knowledge Graph Construction for Embodied AI
Venue: Journal TKDE 2024
Year: 2024

Embodied AI is one of the most popular studies in artificial intelligence and robotics, which can effectively improve the intelligence of real-world agents (i.e. robots) serving human beings. Scene knowledge is important for an agent to understand the surroundings and make correct decisions in the varied open world. Currently, knowledge base for embodied tasks is missing and most existing work use general knowledge base or pre-trained models to enhance the intelligence of an agent. For conventional knowledge base, it is sparse, insufficient in capacity and cost in data collection. For pre-trained models, they face the uncertainty of knowledge and hard maintenance. To overcome the challenges of scene knowledge, we propose a scene-driven multimodal knowledge graph (Scene-MMKG) construction method combining conventional knowledge engineering and large language models. A unified scene knowledge injection framework is introduced for knowledge representation. To evaluate the advantages of our proposed method, we instantiate Scene-MMKG considering typical indoor robotic functionalities (Manipulation and Mobility), named ManipMob-MMKG. Comparisons in characteristics indicate our instantiated ManipMob-MMKG has broad superiority in data-collection efficiency and knowledge quality. Experimental results on typical embodied tasks show that knowledge-enhanced methods using our instantiated ManipMob-MMKG can improve the performance obviously without re-designing model structures complexly. Our project can be found at https://sites.google.com/view/manipmob-mmkg
Start From Zero Triple Set Prediction for Automatic Knowledge Graph Completion
Venue: Journal TKDE 2024
Year: 2024

Knowledge graph (KG) completion aims to find out missing triples in a KG. Some tasks, such as link prediction and instance completion, have been proposed for KG completion. They are triple-level tasks with some elements in a missing triple given to predict the missing element of the triple. However, knowing some elements of the missing triple in advance is not always a realistic setting. In this paper, we propose a novel graph-level automatic KG completion task called Triple Set Prediction (TSP) which assumes none of the elements in the missing triples is given. TSP is to predict a set of missing triples given a set of known triples. To properly and accurately evaluate this new task, we propose 4 evaluation metrics including 3 classification metrics and 1 ranking metric, considering both the partial-open-world and the closed-world assumptions. Furthermore, to tackle the huge candidate triples for prediction, we propose a novel and efficient subgraph-based method GPHT that can predict the triple set fast. To fairly compare the TSP results, we also propose two types of methods RuleTensor-TSP and KGE-TSP applying the existing rule- and embedding-based methods for TSP as baselines. During experiments, we evaluate the proposed methods on two datasets extracted from Wikidata following the relation-similarity partial-open-world assumption proposed by us, and also create a complete family data set to evaluate TSP results following the closed-world assumption. Results prove that the methods can successfully generate a set of missing triples and achieve reasonable scores on the new task, and GPHT performs better than the baselines with significantly shorter prediction time. The datasets and code for experiments are available at https://github.com/zjukg/GPHT-for-TSP.
Natural Language Interfaces for Tabular Data Querying and Visualization A Survey
Venue: Journal TKDE 2024
Year: 2024

The emergence of natural language processing has revolutionized the way users interact with tabular data, enabling a shift from traditional query languages and manual plotting to more intuitive, language-based interfaces. The rise of large language models (LLMs) such as ChatGPT and its successors has further advanced this field, opening new avenues for natural language processing techniques. This survey presents a comprehensive overview of natural language interfaces for tabular data querying and visualization, which allow users to interact with data using natural language queries. We introduce the fundamental concepts and techniques underlying these interfaces with a particular emphasis on semantic parsing, the key technology facilitating the translation from natural language to SQL queries or data visualization commands. We then delve into the recent advancements in Text-to-SQL and Text-to-Vis problems from the perspectives of datasets, methodologies, metrics, and system designs. This includes a deep dive into the influence of LLMs, highlighting their strengths, limitations, and potential for future improvements. Through this survey, we aim to provide a roadmap for researchers and practitioners interested in developing and applying natural language interfaces for data interaction in the era of large language models.
Block-Diagonal Guided DBSCAN Clustering
Venue: Journal TKDE 2024
Year: 2024

Cluster analysis plays a crucial role in database mining, and one of the most widely used algorithms in this field is DBSCAN. However, DBSCAN has several limitations, such as difficulty in handling high-dimensional large-scale data, sensitivity to input parameters, and lack of robustness in producing clustering results. This paper introduces an improved version of DBSCAN that leverages the block-diagonal property of the similarity graph to guide the clustering procedure of DBSCAN. The key idea is to construct a graph that measures the similarity between high-dimensional large-scale data points and has the potential to be transformed into a block-diagonal form through an unknown permutation, followed by a cluster-ordering procedure to generate the desired permutation. The clustering structure can be easily determined by identifying the diagonal blocks in the permuted graph. We propose a gradient descent-based method to solve the proposed problem. Additionally, we develop a DBSCAN-based points traversal algorithm that identifies clusters with high densities in the graph and generates an augmented ordering of clusters. The block-diagonal structure of the graph is then achieved through permutation based on the traversal order, providing a flexible foundation for both automatic and interactive cluster analysis. We introduce a split-and-refine algorithm to automatically search for all diagonal blocks in the permuted graph with theoretically optimal guarantees under specific cases. We extensively evaluate our proposed approach on twelve challenging real-world benchmark clustering datasets and demonstrate its superior performance compared to the state-of-the-art clustering method on every dataset.
Decentralized Privacy Preservation for Critical Connections in Graphs
Venue: Journal TKDE 2024
Year: 2024

Many real-world interconnections among entities can be characterized as graphs. Collecting local graph information with balanced privacy and data utility has garnered notable interest recently. This paper delves into the problem of identifying and protecting critical information of entity connections for individual participants in a graph based on cohesive subgraph searches. This problem has not been addressed in the literature. To address the problem, we propose to extract the critical connections of a queried vertex using a fortress-like cohesive subgraph model known as $p$-cohesion. A user's connections within a fortress are obfuscated when being released, to protect critical information about the user. Novel merit and penalty score functions are designed to measure each participant's critical connections in the minimal $p$-cohesion, facilitating effective identification of the connections. We further propose to preserve the privacy of a vertex enquired by only protecting its critical connections when responding to queries raised by data collectors. We prove that, under the decentralized differential privacy (DDP) mechanism, one's response satisfies $(\varepsilon, δ)$-DDP when its critical connections are protected while the rest remains unperturbed. The effectiveness of our proposed method is demonstrated through extensive experiments on real-life graph datasets.
Spatiotemporal-Augmented Graph Neural Networks for Human Mobility Simulation
Venue: Journal TKDE 2024
Year: 2024

Human mobility patterns have shown significant applications in policy-decision scenarios and economic behavior researches. The human mobility simulation task aims to generate human mobility trajectories given a small set of trajectory data, which have aroused much concern due to the scarcity and sparsity of human mobility data. Existing methods mostly rely on the static relationships of locations, while largely neglect the dynamic spatiotemporal effects of locations. On the one hand, spatiotemporal correspondences of visit distributions reveal the spatial proximity and the functionality similarity of locations. On the other hand, the varying durations in different locations hinder the iterative generation process of the mobility trajectory. Therefore, we propose a novel framework to model the dynamic spatiotemporal effects of locations, namely SpatioTemporal-Augmented gRaph neural networks (STAR). The STAR framework designs various spatiotemporal graphs to capture the spatiotemporal correspondences and builds a novel dwell branch to simulate the varying durations in locations, which is finally optimized in an adversarial manner. The comprehensive experiments over four real datasets for the human mobility simulation have verified the superiority of STAR to state-of-the-art methods. Our code is available at https://github.com/Star607/STAR-TKDE.
The GraphTempo Framework for Exploring the Evolution of a Graph Through Pattern Aggregation
Venue: Journal TKDE 2024
Year: 2024

When the focus is on the relationships or interactions between entities, graphs offer an intuitive model for many real-world data. Such graphs are usually large and change over time, thus, requiring models and strategies that explore their evolution. We study the evolution of aggregated graphs and introduce the GraphTempo model that allows temporal and attribute aggregation not only on node level by grouping individual nodes, but on a pattern level as well, where subgraphs are grouped together. Furthermore, We propose an efficient strategy for exploring the evolution of the graph based on identifying time intervals of significant growth, shrinkage or stability. Finally, we evaluate the efficiency and effectiveness of the proposed approach using three real graphs.
Generalized Graph Prompt Toward a Unification of Pre-Training and Downstream Tasks on Graphs
Venue: Journal TKDE 2024
Year: 2024

Graph neural networks have emerged as a powerful tool for graph representation learning, but their performance heavily relies on abundant task-specific supervision. To reduce labeling requirement, the "pre-train, prompt" paradigms have become increasingly common. However, existing study of prompting on graphs is limited, lacking a universal treatment to appeal to different downstream tasks. In this paper, we propose GraphPrompt, a novel pre-training and prompting framework on graphs. GraphPrompt not only unifies pre-training and downstream tasks into a common task template but also employs a learnable prompt to assist a downstream task in locating the most relevant knowledge from the pre-trained model in a task-specific manner. To further enhance GraphPrompt in these two stages, we extend it into GraphPrompt+ with two major enhancements. First, we generalize several popular graph pre-training tasks beyond simple link prediction to broaden the compatibility with our task template. Second, we propose a more generalized prompt design that incorporates a series of prompt vectors within every layer of the pre-trained graph encoder, in order to capitalize on the hierarchical information across different layers beyond just the readout layer. Finally, we conduct extensive experiments on five public datasets to evaluate and analyze GraphPrompt and GraphPrompt+.
Query-Oriented Data Augmentation for Session Search
Venue: Journal TKDE 2024
Year: 2024

Modeling contextual information in a search session has drawn more and more attention when understanding complex user intents. Recent methods are all data-driven, i.e., they train different models on large-scale search log data to identify the relevance between search contexts and candidate documents. The common training paradigm is to pair the search context with different candidate documents and train the model to rank the clicked documents higher than the unclicked ones. However, this paradigm neglects the symmetric nature of the relevance between the session context and document, i.e., the clicked documents can also be paired with different search contexts when training. In this work, we propose query-oriented data augmentation to enrich search logs and empower the modeling. We generate supplemental training pairs by altering the most important part of a search context, i.e., the current query, and train our model to rank the generated sequence along with the original sequence. This approach enables models to learn that the relevance of a document may vary as the session context changes, leading to a better understanding of users' search patterns. We develop several strategies to alter the current query, resulting in new training data with varying degrees of difficulty. Through experimentation on two extensive public search logs, we have successfully demonstrated the effectiveness of our model.
Hessian Aware Low-Rank Perturbation for Order-Robust Continual Learning
Venue: Journal TKDE 2024
Year: 2024

Continual learning aims to learn a series of tasks sequentially without forgetting the knowledge acquired from the previous ones. In this work, we propose the Hessian Aware Low-Rank Perturbation algorithm for continual learning. By modeling the parameter transitions along the sequential tasks with the weight matrix transformation, we propose to apply the low-rank approximation on the task-adaptive parameters in each layer of the neural networks. Specifically, we theoretically demonstrate the quantitative relationship between the Hessian and the proposed low-rank approximation. The approximation ranks are then globally determined according to the marginal increment of the empirical loss estimated by the layer-specific gradient and low-rank approximation error. Furthermore, we control the model capacity by pruning less important parameters to diminish the parameter growth. We conduct extensive experiments on various benchmarks, including a dataset with large-scale tasks, and compare our method against some recent state-of-the-art methods to demonstrate the effectiveness and scalability of our proposed method. Empirical results show that our method performs better on different benchmarks, especially in achieving task order robustness and handling the forgetting issue. The source code is at https://github.com/lijiaqi/HALRP.
Laplacian Convolutional Representation for Traffic Time Series Imputation
Venue: Journal TKDE 2024
Year: 2024

Spatiotemporal traffic data imputation is of great significance in intelligent transportation systems and data-driven decision-making processes. To perform efficient learning and accurate reconstruction from partially observed traffic data, we assert the importance of characterizing both global and local trends in time series. In the literature, substantial works have demonstrated the effectiveness of utilizing the low-rank property of traffic data by matrix/tensor completion models. In this study, we first introduce a Laplacian kernel to temporal regularization for characterizing local trends in traffic time series, which can be formulated as a circular convolution. Then, we develop a low-rank Laplacian convolutional representation (LCR) model by putting the circulant matrix nuclear norm and the Laplacian kernelized temporal regularization together, which is proved to meet a unified framework that has a fast Fourier transform (FFT) solution in log-linear time complexity. Through extensive experiments on several traffic datasets, we demonstrate the superiority of LCR over several baseline models for imputing traffic time series of various time series behaviors (e.g., data noises and strong/weak periodicity) and reconstructing sparse speed fields of vehicular traffic flow. The proposed LCR model is also an efficient solution to large-scale traffic data imputation over the existing imputation models.
Lightweight Conceptual Dictionary Learning for Text Classification Using Information Compression
Venue: Journal TKDE 2024
Year: 2024

We propose a novel, lightweight supervised dictionary learning framework for text classification based on data compression and representation. This two-phase algorithm initially employs the Lempel-Ziv-Welch (LZW) algorithm to construct a dictionary from text datasets, focusing on the conceptual significance of dictionary elements. Subsequently, dictionaries are refined considering label data, optimizing dictionary atoms to enhance discriminative power based on mutual information and class distribution. This process generates discriminative numerical representations, facilitating the training of simple classifiers such as SVMs and neural networks. We evaluate our algorithm's information-theoretic performance using information bottleneck principles and introduce the information plane area rank (IPAR) as a novel metric to quantify the information-theoretic performance. Tested on six benchmark text datasets, our algorithm competes closely with top models, especially in limited-vocabulary contexts, using significantly fewer parameters. \review{Our algorithm closely matches top-performing models, deviating by only ~2\% on limited-vocabulary datasets, using just 10\% of their parameters. However, it falls short on diverse-vocabulary datasets, likely due to the LZW algorithm's constraints with low-repetition data. This contrast highlights its efficiency and limitations across different dataset types.