# List of human transcription factors

This list of manually curated human transcription factors is taken from Lambert, Jolma, Campitelli et al. It was assembled by manual curation. More detailed information is found in the manuscript and the web site accompanying the paper (Human Transcription Factors)

## List of human transcription factors (1639)

| Gene | ID | DBD | Motif status (Feb 2018) (Link to human TFs annotation) | IUPAC consensus (from selected PWM) |
| AC008770.3 | ENSG00000267179 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| AC023509.3 | ENSG00000267281 | bZIP | Known motif – from protein with 100% identical DBD – in vitro | RTGACGTCAY |
| AC092835.1 | ENSG00000233757 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| AC138696.1 | ENSG00000264668 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | RYGGAGAGTTAGC |
| ADNP | ENSG00000101126 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| ADNP2 | ENSG00000101544 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| AEBP1 | ENSG00000106624 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| AEBP2 | ENSG00000139154 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| AHCTF1 | ENSG00000153207 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| AHDC1 | ENSG00000126705 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| AHR | ENSG00000106546 | bHLH | Known motif – In vivo/Misc source | BKNGCGTGHV |
| AHRR | ENSG00000063438 | bHLH | Inferred motif from similar protein – In vivo/Misc source | BKNGCGTGHV |
| AIRE | ENSG00000160224 | SAND | Known motif – In vivo/Misc source | HNNGGWWNWDWWGGDBDH |
| AKAP8 | ENSG00000105127 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| AKAP8L | ENSG00000011243 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| AKNA | ENSG00000106948 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| ALX1 | ENSG00000180318 | Homeodomain | Known motif – High-throughput in vitro | TAATYTAATTA |
| ALX3 | ENSG00000156150 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| ALX4 | ENSG00000052850 | Homeodomain | Known motif – High-throughput in vitro | TAATYNRRTTA |
| ANHX | ENSG00000227059 | Homeodomain | Known motif – High-throughput in vitro | KTKACAWG |
| ANKZF1 | ENSG00000163516 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| AR | ENSG00000169083 | Nuclear receptor | Known motif – High-throughput in vitro | RGGWACRHBDYGTWCYH |
| ARGFX | ENSG00000186103 | Homeodomain | Known motif – High-throughput in vitro | DYTAATTAR |
| ARHGAP35 | ENSG00000160007 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| ARID2 | ENSG00000189079 | ARID/BRIGHT; RFX | Likely sequence specific TF according to literature or domain structure – No motif | |
| ARID3A | ENSG00000116017 | ARID/BRIGHT | Known motif – from protein with 100% identical DBD – in vitro | DATHAAD |
| ARID3B | ENSG00000179361 | ARID/BRIGHT | Inferred motif from similar protein – High-throughput in vitro | WWTTAATH |
| ARID3C | ENSG00000205143 | ARID/BRIGHT | Inferred motif from similar protein – High-throughput in vitro | DATHAAD |
| ARID5A | ENSG00000196843 | ARID/BRIGHT | Known motif – from protein with 100% identical DBD – in vitro | HAATATTD |
| ARID5B | ENSG00000150347 | ARID/BRIGHT | Known motif – from protein with 100% identical DBD – in vitro | DATWH |
| ARNT | ENSG00000143437 | bHLH | Known motif – from protein with 100% identical DBD – in vitro | KCACGTGM |
| ARNT2 | ENSG00000172379 | bHLH | Known motif – High-throughput in vitro | RDCACGTGM |
| ARNTL | ENSG00000133794 | bHLH | Known motif – High-throughput in vitro | GTCACGTGAC |
| ARNTL2 | ENSG00000029153 | bHLH | Inferred motif from similar protein – High-throughput in vitro | CACGTGAY |
| ARX | ENSG00000004848 | Homeodomain | Known motif – High-throughput in vitro | TAATYNRATTA |
| ASCL1 | ENSG00000139352 | bHLH | Known motif – High-throughput in vitro | RCASSTGY |
| ASCL2 | ENSG00000183734 | bHLH | Known motif – High-throughput in vitro | RCAGCTGY |
| ASCL3 | ENSG00000176009 | bHLH | Inferred motif from similar protein – High-throughput in vitro | RCASSTGY |
| ASCL4 | ENSG00000187855 | bHLH | Inferred motif from similar protein – High-throughput in vitro | RCASSTGY |
| ASCL5 | ENSG00000232237 | bHLH | Inferred motif from similar protein – High-throughput in vitro | RCASSTGY |
| ASH1L | ENSG00000116539 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| ATF1 | ENSG00000123268 | bZIP | Known motif – In vivo/Misc source | VTGACGTSAV |
| ATF2 | ENSG00000115966 | bZIP | Known motif – High-throughput in vitro | VTKACGTMAB |
| ATF3 | ENSG00000162772 | bZIP | Known motif – High-throughput in vitro | RTGACGTCAY |
| ATF4 | ENSG00000128272 | bZIP | Known motif – High-throughput in vitro | RKATGACGTCATMY |
| ATF5 | ENSG00000169136 | bZIP | Known motif – In vivo/Misc source | WAAGGRAGARR |
| ATF6 | ENSG00000118217 | bZIP | Known motif – High-throughput in vitro | YKRTGACGTGGCA |
| ATF6B | ENSG00000213676 | bZIP | Known motif – High-throughput in vitro | RTGACGTGGCR |
| ATF7 | ENSG00000170653 | bZIP | Known motif – High-throughput in vitro | DRTGACGTCAT |
| ATMIN | ENSG00000166454 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ATOH1 | ENSG00000172238 | bHLH | Known motif – High-throughput in vitro | RACAGCTGYY |
| ATOH7 | ENSG00000179774 | bHLH | Known motif – High-throughput in vitro | RVCATATGBT |
| ATOH8 | ENSG00000168874 | bHLH | Inferred motif from similar protein – High-throughput in vitro | AAWTANNNBRMCATATGKY |
| BACH1 | ENSG00000156273 | bZIP | Known motif – In vivo/Misc source | RTGACTCAGCANWWH |
| BACH2 | ENSG00000112182 | bZIP | Known motif – High-throughput in vitro | WDNSATGASTCATGNWW |
| BARHL1 | ENSG00000125492 | Homeodomain | Known motif – High-throughput in vitro | TAAWYG |
| BARHL2 | ENSG00000143032 | Homeodomain | Known motif – High-throughput in vitro | TAAWBG |
| BARX1 | ENSG00000131668 | Homeodomain | Known motif – High-throughput in vitro | TAATBGNWWWTTAATBR |
| BARX2 | ENSG00000043039 | Homeodomain | Known motif – High-throughput in vitro | TAAYKRTTWW |
| BATF | ENSG00000156127 | bZIP | Known motif – High-throughput in vitro | VVYGMCAC |
| BATF2 | ENSG00000168062 | bZIP | Likely sequence specific TF according to literature or domain structure – No motif | |
| BATF3 | ENSG00000123685 | bZIP | Known motif – High-throughput in vitro | VTGACGTCAYV |
| BAZ2A | ENSG00000076108 | MBD; AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| BAZ2B | ENSG00000123636 | MBD | Likely sequence specific TF according to literature or domain structure – No motif | |
| BBX | ENSG00000114439 | HMG/Sox | Known motif – High-throughput in vitro | TGAWCDNYGWTCA |
| BCL11A | ENSG00000119866 | C2H2 ZF | Known motif – In vivo/Misc source | DDRRGGAASTGARAV |
| BCL11B | ENSG00000127152 | C2H2 ZF | Known motif – High-throughput in vitro | GTGAACGBNDNNVCTACAC |
| BCL6 | ENSG00000113916 | C2H2 ZF | Known motif – High-throughput in vitro | YGCTTTCKAGGAAH |
| BCL6B | ENSG00000161940 | C2H2 ZF | Known motif – High-throughput in vitro | GCTTTCKAGGAAH |
| BHLHA15 | ENSG00000180535 | bHLH | Known motif – High-throughput in vitro | VCATATGB |
| BHLHA9 | ENSG00000205899 | bHLH | Likely sequence specific TF according to literature or domain structure – No motif | |
| BHLHE22 | ENSG00000180828 | bHLH | Known motif – High-throughput in vitro | AVCATATGBT |
| BHLHE23 | ENSG00000125533 | bHLH | Known motif – High-throughput in vitro | AVCATATGBY |
| BHLHE40 | ENSG00000134107 | bHLH | Known motif – High-throughput in vitro | DKCACGTGM |
| BHLHE41 | ENSG00000123095 | bHLH | Known motif – High-throughput in vitro | RKCACGTGAY |
| BNC1 | ENSG00000169594 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | CCRCCWTCA |
| BNC2 | ENSG00000173068 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | CCRCCWTCA |
| BORCS8-MEF2B | ENSG00000064489 | MADS box | Known motif – from protein with 100% identical DBD – in vitro | CCDWWWHNRG |
| BPTF | ENSG00000171634 | Unknown | Known motif – In vivo/Misc source | KKKNTTGTKKNV |
| BRF2 | ENSG00000104221 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| BSX | ENSG00000188909 | Homeodomain | Known motif – High-throughput in vitro | TAATBR |
| C11orf95 | ENSG00000188070 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| CAMTA1 | ENSG00000171735 | CG-1 | Likely sequence specific TF according to literature or domain structure – No motif | |
| CAMTA2 | ENSG00000108509 | CG-1 | Likely sequence specific TF according to literature or domain structure – No motif | |
| CARF | ENSG00000138380 | Unknown | Known motif – In vivo/Misc source | GCCTCGTTYTSR |
| CASZ1 | ENSG00000130940 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| CBX2 | ENSG00000173894 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| CC2D1A | ENSG00000132024 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CCDC169-SOHLH2 | ENSG00000250709 | bHLH | Known motif – from protein with 100% identical DBD – in vitro | BCACGTGC |
| CCDC17 | ENSG00000159588 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| CDC5L | ENSG00000096401 | Myb/SANT | Known motif – In vivo/Misc source | VBGWKDTAAYRWAWB |
| CDX1 | ENSG00000113722 | Homeodomain | Known motif – High-throughput in vitro | TTTATKRB |
| CDX2 | ENSG00000165556 | Homeodomain | Known motif – High-throughput in vitro | DWWATKRB |
| CDX4 | ENSG00000131264 | Homeodomain | Known motif – High-throughput in vitro | VKTTTATKRCH |
| CEBPA | ENSG00000245848 | bZIP | Known motif – from protein with 100% identical DBD – in vitro | TTGCGHAA |
| CEBPB | ENSG00000172216 | bZIP | Known motif – High-throughput in vitro | VTTRCGCAAY |
| CEBPD | ENSG00000221869 | bZIP | Known motif – High-throughput in vitro | VTTRCGCAAY |
| CEBPE | ENSG00000092067 | bZIP | Known motif – High-throughput in vitro | VTTRCGCAAY |
| CEBPG | ENSG00000153879 | bZIP | Known motif – High-throughput in vitro | RTTRCGCAAY |
| CEBPZ | ENSG00000115816 | Unknown | Known motif – In vivo/Misc source | DSTSATTGGCT |
| CENPA | ENSG00000115163 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CENPB | ENSG00000125817 | CENPB | Known motif – High-throughput in vitro | TWCGYNNNAHRCGGG |
| CENPBD1 | ENSG00000177946 | CENPB | Known motif – High-throughput in vitro | WNYGWAD |
| CENPS | ENSG00000175279 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CENPT | ENSG00000102901 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CENPX | ENSG00000169689 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CGGBP1 | ENSG00000163320 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CHAMP1 | ENSG00000198824 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| CHCHD3 | ENSG00000106554 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CIC | ENSG00000079432 | HMG/Sox | Known motif – from protein with 100% identical DBD – in vitro | VTCAGCA |
| CLOCK | ENSG00000134852 | bHLH | Known motif – High-throughput in vitro | DACACGTGYH |
| CPEB1 | ENSG00000214575 | Unknown | Known motif – High-throughput in vitro | HTTTTATH |
| CPXCR1 | ENSG00000147183 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| CREB1 | ENSG00000118260 | bZIP | Known motif – High-throughput in vitro | VTKACGTMA |
| CREB3 | ENSG00000107175 | bZIP | Known motif – High-throughput in vitro | RTGACGTGKH |
| CREB3L1 | ENSG00000157613 | bZIP | Known motif – High-throughput in vitro | TGCCACGTGGCR |
| CREB3L2 | ENSG00000182158 | bZIP | Known motif – from protein with 100% identical DBD – in vitro | HCACGTGKM |
| CREB3L3 | ENSG00000060566 | bZIP | Likely sequence specific TF according to literature or domain structure – No motif | |
| CREB3L4 | ENSG00000143578 | bZIP | Known motif – High-throughput in vitro | VTGACGTGGM |
| CREB5 | ENSG00000146592 | bZIP | Known motif – High-throughput in vitro | VTKACRTMAB |
| CREBL2 | ENSG00000111269 | bZIP | Inferred motif from similar protein – High-throughput in vitro | ATKACGTMAY |
| CREBZF | ENSG00000137504 | bZIP | Inferred motif from similar protein – High-throughput in vitro | WWACGTWD |
| CREM | ENSG00000095794 | bZIP | Known motif – High-throughput in vitro | VVTBACGTVAB |
| CRX | ENSG00000105392 | Homeodomain | Known motif – High-throughput in vitro | TAATCC |
| CSRNP1 | ENSG00000144655 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CSRNP2 | ENSG00000110925 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CSRNP3 | ENSG00000178662 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| CTCF | ENSG00000102974 | C2H2 ZF | Known motif – High-throughput in vitro | CCDSBAGGKGGCGCB |
| CTCFL | ENSG00000124092 | C2H2 ZF | Known motif – In vivo/Misc source | CCNSYAGGGGGCGCY |
| CUX1 | ENSG00000257923 | CUT; Homeodomain | Known motif – High-throughput in vitro | ATYGATHA |
| CUX2 | ENSG00000111249 | CUT; Homeodomain | Known motif – High-throughput in vitro | DDATYGATYA |
| CXXC1 | ENSG00000154832 | CxxC | Known motif – High-throughput in vitro | BCG |
| CXXC4 | ENSG00000168772 | CxxC | Likely sequence specific TF according to literature or domain structure – No motif | |
| CXXC5 | ENSG00000171604 | CxxC | Known motif – High-throughput in vitro | DCK |
| DACH1 | ENSG00000276644 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| DACH2 | ENSG00000126733 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| DBP | ENSG00000105516 | bZIP | Known motif – High-throughput in vitro | RTTAYRTAAB |
| DBX1 | ENSG00000109851 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | WTTAATTA |
| DBX2 | ENSG00000185610 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | AH |
| DDIT3 | ENSG00000175197 | bZIP | Known motif – In vivo/Misc source | RVVKATTGCANNB |
| DEAF1 | ENSG00000177030 | SAND | Inferred motif from similar protein – In vivo/Misc source | VCRBNYYCGKGDRYTTCCGDVDNNB |
| DLX1 | ENSG00000144355 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| DLX2 | ENSG00000115844 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| DLX3 | ENSG00000064195 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| DLX4 | ENSG00000108813 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| DLX5 | ENSG00000105880 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| DLX6 | ENSG00000006377 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| DMBX1 | ENSG00000197587 | Homeodomain | Known motif – High-throughput in vitro | HTAATCCB |
| DMRT1 | ENSG00000137090 | DM | Known motif – High-throughput in vitro | GHWACWH |
| DMRT2 | ENSG00000173253 | DM | Known motif – High-throughput in vitro | DATAMATT |
| DMRT3 | ENSG00000064218 | DM | Known motif – High-throughput in vitro | DWWTTGWTACAWT |
| DMRTA1 | ENSG00000176399 | DM | Known motif – High-throughput in vitro | DDWTGHTACAW |
| DMRTA2 | ENSG00000142700 | DM | Known motif – High-throughput in vitro | DHBGHWACADB |
| DMRTB1 | ENSG00000143006 | DM | Likely sequence specific TF according to literature or domain structure – No motif | |
| DMRTC2 | ENSG00000142025 | DM | Known motif – High-throughput in vitro | WWTTGHTACAW |
| DMTF1 | ENSG00000135164 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| DNMT1 | ENSG00000130816 | CxxC | Known motif – High-throughput in vitro | CGG |
| DNTTIP1 | ENSG00000101457 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| DOT1L | ENSG00000104885 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| DPF1 | ENSG00000011332 | C2H2 ZF | Known motif – High-throughput in vitro | KMTATAGGBG |
| DPF3 | ENSG00000205683 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | KMTATAGGBG |
| DPRX | ENSG00000204595 | Homeodomain | Known motif – High-throughput in vitro | RGMTAATCY |
| DR1 | ENSG00000117505 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| DRAP1 | ENSG00000175550 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| DRGX | ENSG00000165606 | Homeodomain | Known motif – High-throughput in vitro | TAATYNAATTA |
| DUX1 | DUX1_HUMAN | Homeodomain | Known motif – In vivo/Misc source | ATAATCTGATTAT |
| DUX3 | DUX3_HUMAN | Homeodomain | Known motif – In vivo/Misc source | TTAATTAAATTAA |
| DUX4 | ENSG00000260596 | Homeodomain | Known motif – In vivo/Misc source | TGATTRRRTTA |
| DUXA | ENSG00000258873 | Homeodomain | Known motif – High-throughput in vitro | TGATTRVRTYD |
| DZIP1 | ENSG00000134874 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| E2F1 | ENSG00000101412 | E2F | Known motif – High-throughput in vitro | WTTGGCGCCHWW |
| E2F2 | ENSG00000007968 | E2F | Known motif – High-throughput in vitro | WDWWGGCGCCHWWH |
| E2F3 | ENSG00000112242 | E2F | Known motif – High-throughput in vitro | TTTTGGCGCCMTTTTY |
| E2F4 | ENSG00000205250 | E2F | Known motif – High-throughput in vitro | TTTGGCGCCAAA |
| E2F5 | ENSG00000133740 | E2F | Known motif – In vivo/Misc source | TTTSGCGC |
| E2F6 | ENSG00000169016 | E2F | Known motif – In vivo/Misc source | DGGMGGGARV |
| E2F7 | ENSG00000165891 | E2F | Known motif – High-throughput in vitro | WTTTGGCGGGAAAH |
| E2F8 | ENSG00000129173 | E2F | Known motif – High-throughput in vitro | TTTGGCGGGAAA |
| E4F1 | ENSG00000167967 | C2H2 ZF | Known motif – In vivo/Misc source | RTGACGTARS |
| EBF1 | ENSG00000164330 | EBF1 | Known motif – High-throughput in vitro | ANTCCCHWGGGAHH |
| EBF2 | ENSG00000221818 | EBF1 | Known motif – In vivo/Misc source | VTGMAACCCCCWWTHVK |
| EBF3 | ENSG00000108001 | EBF1 | Known motif – In vivo/Misc source | BTCCCYWGRGD |
| EBF4 | ENSG00000088881 | EBF1 | Known motif – In vivo/Misc source | CGSATAACCMTTGTTATCAB |
| EEA1 | ENSG00000102189 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| EGR1 | ENSG00000120738 | C2H2 ZF | Known motif – High-throughput in vitro | MCGCCCMCGCA |
| EGR2 | ENSG00000122877 | C2H2 ZF | Known motif – High-throughput in vitro | MCGCCCACGCD |
| EGR3 | ENSG00000179388 | C2H2 ZF | Known motif – High-throughput in vitro | HMCGCCCMCGCAH |
| EGR4 | ENSG00000135625 | C2H2 ZF | Known motif – High-throughput in vitro | HMCGCCCACGCAH |
| EHF | ENSG00000135373 | Ets | Known motif – High-throughput in vitro | ACCCGGAAGTD |
| ELF1 | ENSG00000120690 | Ets | Known motif – High-throughput in vitro | WHSCGGAAGY |
| ELF2 | ENSG00000109381 | Ets | Known motif – High-throughput in vitro | AMCCGGAAGTV |
| ELF3 | ENSG00000163435 | Ets; AT hook | Known motif – High-throughput in vitro | WACCCGGAAGTR |
| ELF4 | ENSG00000102034 | Ets | Known motif – High-throughput in vitro | ABSCGGAAGTR |
| ELF5 | ENSG00000135374 | Ets | Known motif – High-throughput in vitro | WNVMGGAARY |
| ELK1 | ENSG00000126767 | Ets | Known motif – High-throughput in vitro | RCCGGAAGT |
| ELK3 | ENSG00000111145 | Ets | Known motif – High-throughput in vitro | RCCGGAAGT |
| ELK4 | ENSG00000158711 | Ets | Known motif – High-throughput in vitro | ACCGGAARY |
| EMX1 | ENSG00000135638 | Homeodomain | Known motif – High-throughput in vitro | BTAATTR |
| EMX2 | ENSG00000170370 | Homeodomain | Known motif – High-throughput in vitro | BTAATTA |
| EN1 | ENSG00000163064 | Homeodomain | Known motif – High-throughput in vitro | TAATTRVB |
| EN2 | ENSG00000164778 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| EOMES | ENSG00000163508 | T-box | Known motif – High-throughput in vitro | WTCACACCTH |
| EPAS1 | ENSG00000116016 | bHLH | Known motif – In vivo/Misc source | VDACGTGHH |
| ERF | ENSG00000105722 | Ets | Known motif – High-throughput in vitro | ACCGGAARTV |
| ERG | ENSG00000157554 | Ets | Known motif – High-throughput in vitro | ACCGGAARY |
| ESR1 | ENSG00000091831 | Nuclear receptor | Known motif – High-throughput in vitro | AGGTCAYSRTGACCT |
| ESR2 | ENSG00000140009 | Nuclear receptor | Known motif – from protein with 100% identical DBD – in vitro | RGGTCAH |
| ESRRA | ENSG00000173153 | Nuclear receptor | Known motif – High-throughput in vitro | SAAGGTCA |
| ESRRB | ENSG00000119715 | Nuclear receptor | Known motif – High-throughput in vitro | TCAAGGTCAWH |
| ESRRG | ENSG00000196482 | Nuclear receptor | Known motif – High-throughput in vitro | SAAGGTCR |
| ESX1 | ENSG00000123576 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| ETS1 | ENSG00000134954 | Ets | Known motif – High-throughput in vitro | RCCGGAWRYRYWTCCGSH |
| ETS2 | ENSG00000157557 | Ets | Known motif – High-throughput in vitro | ACCGGAWGYRCWTCCGGT |
| ETV1 | ENSG00000006468 | Ets | Known motif – High-throughput in vitro | RCCGGAWRY |
| ETV2 | ENSG00000105672 | Ets | Known motif – High-throughput in vitro | DACCGGAARYD |
| ETV3 | ENSG00000117036 | Ets | Known motif – High-throughput in vitro | AHCGGAWWTCCGNT |
| ETV3L | ENSG00000253831 | Ets | Known motif – from protein with 100% identical DBD – in vitro | VGGAWR |
| ETV4 | ENSG00000175832 | Ets | Known motif – High-throughput in vitro | RCCGGAWGY |
| ETV5 | ENSG00000244405 | Ets | Known motif – High-throughput in vitro | DVCGGAWRY |
| ETV6 | ENSG00000139083 | Ets | Known motif – High-throughput in vitro | SCGGAASCGGAAGYR |
| ETV7 | ENSG00000010030 | Ets | Known motif – High-throughput in vitro | VVGGAAGYRCTTCCBB |
| EVX1 | ENSG00000106038 | Homeodomain | Known motif – High-throughput in vitro | TAATBRB |
| EVX2 | ENSG00000174279 | Homeodomain | Known motif – High-throughput in vitro | TAATBRB |
| FAM170A | ENSG00000164334 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| FAM200B | ENSG00000237765 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| FBXL19 | ENSG00000099364 | CxxC | Likely sequence specific TF according to literature or domain structure – No motif | |
| FERD3L | ENSG00000146618 | bHLH | Known motif – High-throughput in vitro | GYRMCAGCTGTBRC |
| FEV | ENSG00000163497 | Ets | Known motif – High-throughput in vitro | ACCGGAART |
| FEZF1 | ENSG00000128610 | C2H2 ZF | Known motif – High-throughput in vitro | AAAARRRCAV |
| FEZF2 | ENSG00000153266 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | AAAWGAGCAATCA |
| FIGLA | ENSG00000183733 | bHLH | Known motif – High-throughput in vitro | MCAGGTGKD |
| FIZ1 | ENSG00000179943 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| FLI1 | ENSG00000151702 | Ets | Known motif – High-throughput in vitro | RCCGGAWRY |
| FLYWCH1 | ENSG00000059122 | FLYWCH | Likely sequence specific TF according to literature or domain structure – No motif | |
| FOS | ENSG00000170345 | bZIP | Known motif – High-throughput in vitro | BRTGACGTCAYV |
| FOSB | ENSG00000125740 | bZIP | Known motif – High-throughput in vitro | RTGACGTCAY |
| FOSL1 | ENSG00000175592 | bZIP | Known motif – High-throughput in vitro | DRTGAYRCR |
| FOSL2 | ENSG00000075426 | bZIP | Known motif – High-throughput in vitro | TKANTCAYNRTGACGTCAY |
| FOXA1 | ENSG00000129514 | Forkhead | Known motif – High-throughput in vitro | BVYTAWGTAAACAAW |
| FOXA2 | ENSG00000125798 | Forkhead | Known motif – High-throughput in vitro | HNNGTMAATATTKRYNBD |
| FOXA3 | ENSG00000170608 | Forkhead | Known motif – High-throughput in vitro | BVYTAWGTAAACAAA |
| FOXB1 | ENSG00000171956 | Forkhead | Known motif – High-throughput in vitro | WRWGTMAATATTKACWYW |
| FOXB2 | ENSG00000204612 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | HWRWGYMAATATTKRCHYW |
| FOXC1 | ENSG00000054598 | Forkhead | Known motif – High-throughput in vitro | WRWRTMAAYAW |
| FOXC2 | ENSG00000176692 | Forkhead | Known motif – High-throughput in vitro | WAHRTMAAYAWW |
| FOXD1 | ENSG00000251493 | Forkhead | Known motif – from protein with 100% identical DBD – in vitro | HWASAATAAYAWW |
| FOXD2 | ENSG00000186564 | Forkhead | Known motif – High-throughput in vitro | RTAAAYA |
| FOXD3 | ENSG00000187140 | Forkhead | Known motif – High-throughput in vitro | RTAAAYA |
| FOXD4 | ENSG00000170122 | Forkhead | Inferred motif from similar protein – In vivo/Misc source | GTTAAAGCVAKTTTAA |
| FOXD4L1 | ENSG00000184492 | Forkhead | Inferred motif from similar protein – In vivo/Misc source | GTTAAAGCVAKTTTAA |
| FOXD4L3 | ENSG00000187559 | Forkhead | Inferred motif from similar protein – In vivo/Misc source | MGGTAAATCMAGGGWWT |
| FOXD4L4 | ENSG00000184659 | Forkhead | Known motif – In vivo/Misc source | MGGTAAATCMAGGGWWT |
| FOXD4L5 | ENSG00000204779 | Forkhead | Inferred motif from similar protein – In vivo/Misc source | MGGTAAATCMAGGGWWT |
| FOXD4L6 | ENSG00000273514 | Forkhead | Inferred motif from similar protein – In vivo/Misc source | MGGTAAATCMAGGGWWT |
| FOXE1 | ENSG00000178919 | Forkhead | Known motif – High-throughput in vitro | BVYTAWRYAAACAD |
| FOXE3 | ENSG00000186790 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | BVYTAWRYAAACAD |
| FOXF1 | ENSG00000103241 | Forkhead | Known motif – In vivo/Misc source | YRHATAAACAHNB |
| FOXF2 | ENSG00000137273 | Forkhead | Known motif – In vivo/Misc source | BNHNBRTAAACAHNV |
| FOXG1 | ENSG00000176165 | Forkhead | Known motif – High-throughput in vitro | RTAAACAH |
| FOXH1 | ENSG00000160973 | Forkhead | Known motif – In vivo/Misc source | BNSAATMCACA |
| FOXI1 | ENSG00000168269 | Forkhead | Known motif – High-throughput in vitro | RTMAACA |
| FOXI2 | ENSG00000186766 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | RTMAACA |
| FOXI3 | ENSG00000214336 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | RTMAACA |
| FOXJ1 | ENSG00000129654 | Forkhead | Known motif – from protein with 100% identical DBD – in vitro | HAAACAAA |
| FOXJ2 | ENSG00000065970 | Forkhead | Known motif – High-throughput in vitro | GTAAACAWMAACA |
| FOXJ3 | ENSG00000198815 | Forkhead | Known motif – High-throughput in vitro | RTAAACAW |
| FOXK1 | ENSG00000164916 | Forkhead | Known motif – High-throughput in vitro | RWMMAYA |
| FOXK2 | ENSG00000141568 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | RWMAACAA |
| FOXL1 | ENSG00000176678 | Forkhead | Known motif – High-throughput in vitro | RTAAACA |
| FOXL2 | ENSG00000183770 | Forkhead | Known motif – High-throughput in vitro | VBGHMAACAH |
| FOXM1 | ENSG00000111206 | Forkhead | Known motif – from protein with 100% identical DBD – in vitro | RWHR |
| FOXN1 | ENSG00000109101 | Forkhead | Known motif – In vivo/Misc source | WVBSACGCB |
| FOXN2 | ENSG00000170802 | Forkhead | Known motif – High-throughput in vitro | GCGTSNNNNNSACGC |
| FOXN3 | ENSG00000053254 | Forkhead | Known motif – High-throughput in vitro | GTAAACAA |
| FOXN4 | ENSG00000139445 | Forkhead | Known motif – In vivo/Misc source | WHNWRRNGACGCYATNHM |
| FOXO1 | ENSG00000150907 | Forkhead | Known motif – High-throughput in vitro | RTAAACATGTTTAC |
| FOXO3 | ENSG00000118689 | Forkhead | Known motif – High-throughput in vitro | GTAAACAW |
| FOXO4 | ENSG00000184481 | Forkhead | Known motif – High-throughput in vitro | GTAAACA |
| FOXO6 | ENSG00000204060 | Forkhead | Known motif – High-throughput in vitro | GTAAACATGTTTAC |
| FOXP1 | ENSG00000114861 | Forkhead | Known motif – High-throughput in vitro | TGTTTRYNRTNNNNNNBNAYRVWMAACA |
| FOXP2 | ENSG00000128573 | Forkhead | Known motif – High-throughput in vitro | RTAAAYAW |
| FOXP3 | ENSG00000049768 | Forkhead | Known motif – High-throughput in vitro | RTAAACA |
| FOXP4 | ENSG00000137166 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | RTMAAYA |
| FOXQ1 | ENSG00000164379 | Forkhead | Known motif – High-throughput in vitro | YWRHRTAAACWD |
| FOXR1 | ENSG00000176302 | Forkhead | Known motif – High-throughput in vitro | CAADY |
| FOXR2 | ENSG00000189299 | Forkhead | Known motif – High-throughput in vitro | RYRTAWACATAAAWRHH |
| FOXS1 | ENSG00000179772 | Forkhead | Inferred motif from similar protein – High-throughput in vitro | HNNRHMAAYA |
| GABPA | ENSG00000154727 | Ets | Known motif – High-throughput in vitro | RSCGGAWRY |
| GATA1 | ENSG00000102145 | GATA | Known motif – High-throughput in vitro | GATWASMH |
| GATA2 | ENSG00000179348 | GATA | Known motif – High-throughput in vitro | VHGATAHSV |
| GATA3 | ENSG00000107485 | GATA | Known motif – High-throughput in vitro | HGATAAVV |
| GATA4 | ENSG00000136574 | GATA | Known motif – High-throughput in vitro | HGATAAVV |
| GATA5 | ENSG00000130700 | GATA | Known motif – High-throughput in vitro | HGATAASV |
| GATA6 | ENSG00000141448 | GATA | Known motif – High-throughput in vitro | HGATAABVATCD |
| GATAD2A | ENSG00000167491 | GATA | Likely sequence specific TF according to literature or domain structure – No motif | |
| GATAD2B | ENSG00000143614 | GATA | Likely sequence specific TF according to literature or domain structure – No motif | |
| GBX1 | ENSG00000164900 | Homeodomain | Known motif – High-throughput in vitro | BTAATTRSB |
| GBX2 | ENSG00000168505 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| GCM1 | ENSG00000137270 | GCM | Known motif – High-throughput in vitro | BATGCGGGTRS |
| GCM2 | ENSG00000124827 | GCM | Known motif – High-throughput in vitro | HRCCCGCAT |
| GFI1 | ENSG00000162676 | C2H2 ZF | Known motif – High-throughput in vitro | BMAATCACDGCNHBBCACTM |
| GFI1B | ENSG00000165702 | C2H2 ZF | Known motif – High-throughput in vitro | MAATCASDGCNNBBCACT |
| GLI1 | ENSG00000111087 | C2H2 ZF | Known motif – In vivo/Misc source | SMCCHCCCA |
| GLI2 | ENSG00000074047 | C2H2 ZF | Known motif – High-throughput in vitro | GMCCACMCANVNHB |
| GLI3 | ENSG00000106571 | C2H2 ZF | Known motif – High-throughput in vitro | VGACCACCCACVNHG |
| GLI4 | ENSG00000250571 | C2H2 ZF | Known motif – In vivo/Misc source | RRGCCTTGAATGCCANGNYMA |
| GLIS1 | ENSG00000174332 | C2H2 ZF | Known motif – High-throughput in vitro | MGACCCCCCACGWHG |
| GLIS2 | ENSG00000126603 | C2H2 ZF | Known motif – High-throughput in vitro | KACCCCCCRCRDHG |
| GLIS3 | ENSG00000107249 | C2H2 ZF | Known motif – High-throughput in vitro | KACCCCCCACRAAG |
| GLMP | ENSG00000198715 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| GLYR1 | ENSG00000140632 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| GMEB1 | ENSG00000162419 | SAND | Known motif – High-throughput in vitro | KTACGTAMNKTACGTMM |
| GMEB2 | ENSG00000101216 | SAND | Known motif – High-throughput in vitro | YBACGYAM |
| GPBP1 | ENSG00000062194 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| GPBP1L1 | ENSG00000159592 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| GRHL1 | ENSG00000134317 | Grainyhead | Known motif – High-throughput in vitro | DAACCGGTTH |
| GRHL2 | ENSG00000083307 | Grainyhead | Known motif – In vivo/Misc source | RAACHDGHHHDDCHDGTTY |
| GRHL3 | ENSG00000158055 | Grainyhead | Likely sequence specific TF according to literature or domain structure – No motif | |
| GSC | ENSG00000133937 | Homeodomain | Known motif – High-throughput in vitro | HTAATCC |
| GSC2 | ENSG00000063515 | Homeodomain | Known motif – High-throughput in vitro | HTAATCCBH |
| GSX1 | ENSG00000169840 | Homeodomain | Known motif – High-throughput in vitro | TAATKR |
| GSX2 | ENSG00000180613 | Homeodomain | Known motif – High-throughput in vitro | TAATKR |
| GTF2B | ENSG00000137947 | Unknown | Known motif – In vivo/Misc source | STYWYAKASTS |
| GTF2I | ENSG00000263001 | GTF2I-like | Known motif – In vivo/Misc source | VAGVDVKTSH |
| GTF2IRD1 | ENSG00000006704 | GTF2I-like | Known motif – In vivo/Misc source | TRTCGCWG |
| GTF2IRD2 | ENSG00000196275 | GTF2I-like | Likely sequence specific TF according to literature or domain structure – No motif | |
| GTF2IRD2B | ENSG00000174428 | GTF2I-like | Likely sequence specific TF according to literature or domain structure – No motif | |
| GTF3A | ENSG00000122034 | C2H2 ZF | Known motif – High-throughput in vitro | GGATGGGAG |
| GZF1 | ENSG00000125812 | C2H2 ZF | Known motif – In vivo/Misc source | TATAKAVGCGCA |
| HAND1 | ENSG00000113196 | bHLH | Known motif – In vivo/Misc source | DBRTCTGGHWDH |
| HAND2 | ENSG00000164107 | bHLH | Known motif – High-throughput in vitro | HVCAGGTGTK |
| HBP1 | ENSG00000105856 | HMG/Sox | Known motif – from protein with 100% identical DBD – in vitro | DD |
| HDX | ENSG00000165259 | Homeodomain | Known motif – High-throughput in vitro | H |
| HELT | ENSG00000187821 | bHLH | Inferred motif from similar protein – High-throughput in vitro | BBCACGTGY |
| HES1 | ENSG00000114315 | bHLH | Known motif – High-throughput in vitro | KDCRCGTGBB |
| HES2 | ENSG00000069812 | bHLH | Known motif – High-throughput in vitro | VRCACGTGCC |
| HES3 | ENSG00000173673 | bHLH | Inferred motif from similar protein – High-throughput in vitro | KDCRCGTGBB |
| HES4 | ENSG00000188290 | bHLH | Inferred motif from similar protein – High-throughput in vitro | KDCRCGTGBB |
| HES5 | ENSG00000197921 | bHLH | Known motif – High-throughput in vitro | HGGCACGTGYCR |
| HES6 | ENSG00000144485 | bHLH | Known motif – High-throughput in vitro | DACACGTGCC |
| HES7 | ENSG00000179111 | bHLH | Known motif – High-throughput in vitro | YGGCACGTGCCR |
| HESX1 | ENSG00000163666 | Homeodomain | Known motif – High-throughput in vitro | HTAATTRVH |
| HEY1 | ENSG00000164683 | bHLH | Known motif – High-throughput in vitro | BBCRCGYGY |
| HEY2 | ENSG00000135547 | bHLH | Known motif – High-throughput in vitro | BCACGTGB |
| HEYL | ENSG00000163909 | bHLH | Inferred motif from similar protein – High-throughput in vitro | BCACGTGB |
| HHEX | ENSG00000152804 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | ATND |
| HIC1 | ENSG00000177374 | C2H2 ZF | Known motif – High-throughput in vitro | RTGCCMMC |
| HIC2 | ENSG00000169635 | C2H2 ZF | Known motif – High-throughput in vitro | BKGGCAY |
| HIF1A | ENSG00000100644 | bHLH | Known motif – In vivo/Misc source | VVNGCACGTMBNS |
| HIF3A | ENSG00000124440 | bHLH | Inferred motif from similar protein – In vivo/Misc source | RWAWWTMATAWCST |
| HINFP | ENSG00000172273 | C2H2 ZF | Known motif – High-throughput in vitro | GCGGACGYTRSRRCGTCCGC |
| HIVEP1 | ENSG00000095951 | C2H2 ZF | Known motif – In vivo/Misc source | KGRRRARTCCCB |
| HIVEP2 | ENSG00000010818 | C2H2 ZF | Known motif – In vivo/Misc source | KBYDNGGHAABNSS |
| HIVEP3 | ENSG00000127124 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | KBYDNGGHAABNSS |
| HKR1 | ENSG00000181666 | C2H2 ZF | Known motif – High-throughput in vitro | VBKVRVNRDGGAGGRBVNVR |
| HLF | ENSG00000108924 | bZIP | Known motif – High-throughput in vitro | VTTAYRTAAY |
| HLX | ENSG00000136630 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | AWND |
| HMBOX1 | ENSG00000147421 | Homeodomain | Known motif – High-throughput in vitro | VYTAGTTAMV |
| HMG20A | ENSG00000140382 | HMG/Sox | Likely sequence specific TF according to literature or domain structure – No motif | |
| HMG20B | ENSG00000064961 | HMG/Sox | Inferred motif from similar protein – High-throughput in vitro | WDWATAAT |
| HMGA1 | ENSG00000137309 | AT hook | Known motif – In vivo/Misc source | WATTWW |
| HMGA2 | ENSG00000149948 | AT hook | Known motif – In vivo/Misc source | ATATTSSSSDWWAWT |
| HMGN3 | ENSG00000118418 | HMG/Sox | Likely sequence specific TF according to literature or domain structure – No motif | |
| HMX1 | ENSG00000215612 | Homeodomain | Known motif – High-throughput in vitro | TTAAKTGNY |
| HMX2 | ENSG00000188816 | Homeodomain | Known motif – High-throughput in vitro | TTAAKTG |
| HMX3 | ENSG00000188620 | Homeodomain | Known motif – High-throughput in vitro | TAAKTG |
| HNF1A | ENSG00000135100 | Homeodomain | Known motif – High-throughput in vitro | GTTAATNATTAAY |
| HNF1B | ENSG00000275410 | Homeodomain | Known motif – High-throughput in vitro | GTTAATNATTAAY |
| HNF4A | ENSG00000101076 | Nuclear receptor | Known motif – High-throughput in vitro | VRGGTCAAAGTCCA |
| HNF4G | ENSG00000164749 | Nuclear receptor | Known motif – In vivo/Misc source | GDNCAAAGKYCA |
| HOMEZ | ENSG00000215271 | Homeodomain | Known motif – High-throughput in vitro | WWWAATCGTTTW |
| HOXA1 | ENSG00000105991 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| HOXA10 | ENSG00000253293 | Homeodomain | Known motif – High-throughput in vitro | TTWAYGAY |
| HOXA11 | ENSG00000005073 | Homeodomain | Known motif – High-throughput in vitro | DWTTTACGACB |
| HOXA13 | ENSG00000106031 | Homeodomain | Known motif – High-throughput in vitro | DTTTTATKRS |
| HOXA2 | ENSG00000105996 | Homeodomain | Known motif – High-throughput in vitro | BTAATKR |
| HOXA3 | ENSG00000105997 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | TAATKR |
| HOXA4 | ENSG00000197576 | Homeodomain | Known motif – High-throughput in vitro | TAATKRY |
| HOXA5 | ENSG00000106004 | Homeodomain | Known motif – High-throughput in vitro | STAATKRS |
| HOXA6 | ENSG00000106006 | Homeodomain | Known motif – High-throughput in vitro | TAATKRV |
| HOXA7 | ENSG00000122592 | Homeodomain | Known motif – High-throughput in vitro | TAATKRV |
| HOXA9 | ENSG00000078399 | Homeodomain | Known motif – High-throughput in vitro | DTTWAYGAY |
| HOXB1 | ENSG00000120094 | Homeodomain | Known motif – High-throughput in vitro | STAATTA |
| HOXB13 | ENSG00000159184 | Homeodomain | Known motif – High-throughput in vitro | TTWAYDD |
| HOXB2 | ENSG00000173917 | Homeodomain | Known motif – High-throughput in vitro | TAATKR |
| HOXB3 | ENSG00000120093 | Homeodomain | Known motif – High-throughput in vitro | BTAATKR |
| HOXB4 | ENSG00000182742 | Homeodomain | Known motif – High-throughput in vitro | YTAATKAY |
| HOXB5 | ENSG00000120075 | Homeodomain | Known motif – High-throughput in vitro | TAATKRV |
| HOXB6 | ENSG00000108511 | Homeodomain | Known motif – High-throughput in vitro | TAATKRY |
| HOXB7 | ENSG00000260027 | Homeodomain | Known motif – High-throughput in vitro | BTAATKRV |
| HOXB8 | ENSG00000120068 | Homeodomain | Known motif – High-throughput in vitro | TAATKRM |
| HOXB9 | ENSG00000170689 | Homeodomain | Known motif – High-throughput in vitro | WTTTAYGAY |
| HOXC10 | ENSG00000180818 | Homeodomain | Known motif – High-throughput in vitro | WTTWAYGAB |
| HOXC11 | ENSG00000123388 | Homeodomain | Known motif – High-throughput in vitro | WTTWAYGAYH |
| HOXC12 | ENSG00000123407 | Homeodomain | Known motif – High-throughput in vitro | DTTTTACGAYY |
| HOXC13 | ENSG00000123364 | Homeodomain | Known motif – High-throughput in vitro | CTCGTAAAAH |
| HOXC4 | ENSG00000198353 | Homeodomain | Known motif – High-throughput in vitro | TAATKR |
| HOXC5 | ENSG00000172789 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | WRATND |
| HOXC6 | ENSG00000197757 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | TTAATTAB |
| HOXC8 | ENSG00000037965 | Homeodomain | Known motif – High-throughput in vitro | YAATTR |
| HOXC9 | ENSG00000180806 | Homeodomain | Known motif – High-throughput in vitro | TTTTACGAC |
| HOXD1 | ENSG00000128645 | Homeodomain | Known motif – High-throughput in vitro | BTAATTAV |
| HOXD10 | ENSG00000128710 | Homeodomain | Known motif – High-throughput in vitro | DTTTTACGACY |
| HOXD11 | ENSG00000128713 | Homeodomain | Known motif – High-throughput in vitro | DWTTTACGAY |
| HOXD12 | ENSG00000170178 | Homeodomain | Known motif – High-throughput in vitro | DTTTACGAY |
| HOXD13 | ENSG00000128714 | Homeodomain | Known motif – High-throughput in vitro | BCTCGTAAAAH |
| HOXD3 | ENSG00000128652 | Homeodomain | Known motif – High-throughput in vitro | CTAATTAS |
| HOXD4 | ENSG00000170166 | Homeodomain | Known motif – High-throughput in vitro | TMATKRV |
| HOXD8 | ENSG00000175879 | Homeodomain | Known motif – High-throughput in vitro | HWMATTWDB |
| HOXD9 | ENSG00000128709 | Homeodomain | Known motif – High-throughput in vitro | TTTTATKRC |
| HSF1 | ENSG00000185122 | HSF | Known motif – High-throughput in vitro | VGAABVTTCBVGAW |
| HSF2 | ENSG00000025156 | HSF | Known motif – High-throughput in vitro | VGAANNTTCBVGAA |
| HSF4 | ENSG00000102878 | HSF | Known motif – High-throughput in vitro | GAANNTTCBVGAA |
| HSF5 | ENSG00000176160 | HSF | Known motif – High-throughput in vitro | RCGTTCTAGAAYGY |
| HSFX1 | ENSG00000171116 | HSF | Likely sequence specific TF according to literature or domain structure – No motif | |
| HSFX2 | ENSG00000268738 | HSF | Likely sequence specific TF according to literature or domain structure – No motif | |
| HSFY1 | ENSG00000172468 | HSF | Known motif – High-throughput in vitro | DTVGAAYGWTTCGAAYGB |
| HSFY2 | ENSG00000169953 | HSF | Known motif – High-throughput in vitro | DTCGAAHSNWTCGAW |
| IKZF1 | ENSG00000185811 | C2H2 ZF | Known motif – In vivo/Misc source | BTGGGARD |
| IKZF2 | ENSG00000030419 | C2H2 ZF | Known motif – In vivo/Misc source | HDWHGGGADD |
| IKZF3 | ENSG00000161405 | C2H2 ZF | Known motif – High-throughput in vitro | VSNNGGGAA |
| IKZF4 | ENSG00000123411 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | HDWHGGGADD |
| IKZF5 | ENSG00000095574 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | MYYATGCAGRGT |
| INSM1 | ENSG00000173404 | C2H2 ZF | Known motif – In vivo/Misc source | YRMCCCCWKRCA |
| INSM2 | ENSG00000168348 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| IRF1 | ENSG00000125347 | IRF | Known motif – In vivo/Misc source | GAAASTGAAASY |
| IRF2 | ENSG00000168310 | IRF | Known motif – High-throughput in vitro | GAAAVYGAAAS |
| IRF3 | ENSG00000126456 | IRF | Known motif – High-throughput in vitro | HSGAAAVBGAAACYGAAAC |
| IRF4 | ENSG00000137265 | IRF | Known motif – High-throughput in vitro | HCGAAACCGAAACYW |
| IRF5 | ENSG00000128604 | IRF | Known motif – High-throughput in vitro | CGAAACCGAWACH |
| IRF6 | ENSG00000117595 | IRF | Known motif – High-throughput in vitro | RGTWTCRNNNNNNCGAWACY |
| IRF7 | ENSG00000185507 | IRF | Known motif – High-throughput in vitro | CGAAAVYGAAANY |
| IRF8 | ENSG00000140968 | IRF | Known motif – High-throughput in vitro | CGAAACYGAAACY |
| IRF9 | ENSG00000213928 | IRF | Known motif – High-throughput in vitro | AWCGAAACCGAAACY |
| IRX1 | ENSG00000170549 | Homeodomain | Known motif – High-throughput in vitro | DDCRHNNNNNNNNDYGHH |
| IRX2 | ENSG00000170561 | Homeodomain | Known motif – High-throughput in vitro | DTGTYRTGTH |
| IRX3 | ENSG00000177508 | Homeodomain | Known motif – High-throughput in vitro | DACAHGNWWWWNCDTGTH |
| IRX4 | ENSG00000113430 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | DAMAH |
| IRX5 | ENSG00000176842 | Homeodomain | Known motif – High-throughput in vitro | DTGTYRTGTH |
| IRX6 | ENSG00000159387 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | DAMAH |
| ISL1 | ENSG00000016082 | Homeodomain | Known motif – High-throughput in vitro | BTAAKTGS |
| ISL2 | ENSG00000159556 | Homeodomain | Known motif – High-throughput in vitro | YTAAKTGB |
| ISX | ENSG00000175329 | Homeodomain | Known motif – High-throughput in vitro | CYAATTAV |
| JAZF1 | ENSG00000153814 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| JDP2 | ENSG00000140044 | bZIP | Known motif – High-throughput in vitro | RTKACRTMAY |
| JRK | ENSG00000234616 | CENPB | Likely sequence specific TF according to literature or domain structure – No motif | |
| JRKL | ENSG00000183340 | CENPB | Inferred motif from similar protein – High-throughput in vitro | RCGGWWR |
| JUN | ENSG00000177606 | bZIP | Known motif – High-throughput in vitro | DATGACGTMAHNV |
| JUNB | ENSG00000171223 | bZIP | Known motif – High-throughput in vitro | RTKACGTMAY |
| JUND | ENSG00000130522 | bZIP | Known motif – High-throughput in vitro | VTGACGTMA |
| KAT7 | ENSG00000136504 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| KCMF1 | ENSG00000176407 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| KCNIP3 | ENSG00000115041 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| KDM2A | ENSG00000173120 | CxxC | Likely sequence specific TF according to literature or domain structure – No motif | |
| KDM2B | ENSG00000089094 | CxxC | Known motif – High-throughput in vitro | CG |
| KDM5B | ENSG00000117139 | ARID/BRIGHT | Likely sequence specific TF according to literature or domain structure – No motif | |
| KIN | ENSG00000151657 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| KLF1 | ENSG00000105610 | C2H2 ZF | Known motif – High-throughput in vitro | CMCGCCCM |
| KLF10 | ENSG00000155090 | C2H2 ZF | Known motif – High-throughput in vitro | RMCACRCCCMYVHCACRCCCMC |
| KLF11 | ENSG00000172059 | C2H2 ZF | Known motif – High-throughput in vitro | VMCMCRCCCMYNMCACGCCCMC |
| KLF12 | ENSG00000118922 | C2H2 ZF | Known motif – High-throughput in vitro | DRCCACGCCCH |
| KLF13 | ENSG00000169926 | C2H2 ZF | Known motif – High-throughput in vitro | RCCACRCCCMC |
| KLF14 | ENSG00000266265 | C2H2 ZF | Known motif – High-throughput in vitro | DRHCACGCCCMYYH |
| KLF15 | ENSG00000163884 | C2H2 ZF | Known motif – High-throughput in vitro | VHCMCVCCCMY |
| KLF16 | ENSG00000129911 | C2H2 ZF | Known motif – High-throughput in vitro | VMCMCDCCCMC |
| KLF17 | ENSG00000171872 | C2H2 ZF | Known motif – High-throughput in vitro | MMCCACVCWCCCMTY |
| KLF2 | ENSG00000127528 | C2H2 ZF | Known motif – High-throughput in vitro | VCCMCRCCCH |
| KLF3 | ENSG00000109787 | C2H2 ZF | Known motif – High-throughput in vitro | RRCCRCGCCCH |
| KLF4 | ENSG00000136826 | C2H2 ZF | Known motif – High-throughput in vitro | VCCACRCCCH |
| KLF5 | ENSG00000102554 | C2H2 ZF | Known motif – High-throughput in vitro | MCACRCCCH |
| KLF6 | ENSG00000067082 | C2H2 ZF | Known motif – High-throughput in vitro | VMCACRCCCH |
| KLF7 | ENSG00000118263 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | HHMCRCCCH |
| KLF8 | ENSG00000102349 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | MCRCCY |
| KLF9 | ENSG00000119138 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | TAACGG |
| KMT2A | ENSG00000118058 | CxxC; AT hook | Known motif – High-throughput in vitro | HNCGNB |
| KMT2B | ENSG00000272333 | CxxC; AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| L3MBTL1 | ENSG00000185513 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| L3MBTL3 | ENSG00000198945 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| L3MBTL4 | ENSG00000154655 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| LBX1 | ENSG00000138136 | Homeodomain | Known motif – High-throughput in vitro | TAAYTRG |
| LBX2 | ENSG00000179528 | Homeodomain | Known motif – High-throughput in vitro | TAATTRV |
| LCOR | ENSG00000196233 | Pipsqueak | Known motif – from protein with 100% identical DBD – in vitro | YNAAW |
| LCORL | ENSG00000178177 | Pipsqueak | Known motif – High-throughput in vitro | HYNAAWH |
| LEF1 | ENSG00000138795 | HMG/Sox | Known motif – High-throughput in vitro | SATCAAAS |
| LEUTX | ENSG00000213921 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| LHX1 | ENSG00000273706 | Homeodomain | Known motif – High-throughput in vitro | TRATBR |
| LHX2 | ENSG00000106689 | Homeodomain | Known motif – High-throughput in vitro | HHDTTR |
| LHX3 | ENSG00000107187 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | YAATHW |
| LHX4 | ENSG00000121454 | Homeodomain | Known motif – High-throughput in vitro | BYRATTRV |
| LHX5 | ENSG00000089116 | Homeodomain | Known motif – High-throughput in vitro | TAATTRS |
| LHX6 | ENSG00000106852 | Homeodomain | Known motif – High-throughput in vitro | TRATTR |
| LHX8 | ENSG00000162624 | Homeodomain | Known motif – High-throughput in vitro | STAATTA |
| LHX9 | ENSG00000143355 | Homeodomain | Known motif – High-throughput in vitro | TAATTRG |
| LIN28A | ENSG00000131914 | CSD | Inferred motif from similar protein – High-throughput in vitro | CGCHGYYHYWYCGCG |
| LIN28B | ENSG00000187772 | CSD | Known motif – High-throughput in vitro | CGCHGYYHYWYCGCG |
| LIN54 | ENSG00000189308 | TCR/CxC | Inferred motif from similar protein – High-throughput in vitro | RTTYAAAH |
| LMX1A | ENSG00000162761 | Homeodomain | Known motif – High-throughput in vitro | BTAATTA |
| LMX1B | ENSG00000136944 | Homeodomain | Known motif – High-throughput in vitro | TWATTR |
| LTF | ENSG00000012223 | Unknown | Known motif – In vivo/Misc source | GKVACTKB |
| LYL1 | ENSG00000104903 | bHLH | Inferred motif from similar protein – In vivo/Misc source | RNCAGVTGGH |
| MAF | ENSG00000178573 | bZIP | Known motif – High-throughput in vitro | TGCTGACDHDRCR |
| MAFA | ENSG00000182759 | bZIP | Known motif – High-throughput in vitro | WWWNTGCTGACD |
| MAFB | ENSG00000204103 | bZIP | Known motif – from protein with 100% identical DBD – in vitro | TGCTGAC |
| MAFF | ENSG00000185022 | bZIP | Known motif – High-throughput in vitro | YGCTGASTCAGCR |
| MAFG | ENSG00000197063 | bZIP | Known motif – High-throughput in vitro | YGCTGABNDNGCR |
| MAFK | ENSG00000198517 | bZIP | Known motif – High-throughput in vitro | DNNYGCTKAVTCAGCRNNH |
| MAX | ENSG00000125952 | bHLH | Known motif – High-throughput in vitro | CACGTG |
| MAZ | ENSG00000103495 | C2H2 ZF | Known motif – High-throughput in vitro | GGGMGGGGS |
| MBD1 | ENSG00000141644 | MBD; CxxC ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| MBD2 | ENSG00000134046 | MBD | Known motif – In vivo/Misc source | VSGKCCGGMKR |
| MBD3 | ENSG00000071655 | MBD | Likely sequence specific TF according to literature or domain structure – No motif | |
| MBD4 | ENSG00000129071 | MBD | Likely sequence specific TF according to literature or domain structure – No motif | |
| MBD6 | ENSG00000166987 | MBD | Likely sequence specific TF according to literature or domain structure – No motif | |
| MBNL2 | ENSG00000139793 | CCCH ZF | Likely sequence specific TF according to literature or domain structure – High-throughput in vitro | YGCYTYGCYTH |
| MECOM | ENSG00000085276 | C2H2 ZF | Known motif – In vivo/Misc source | WGAYAAGATAANAND |
| MECP2 | ENSG00000169057 | MBD; AT hook | Known motif – from protein with 100% identical DBD – in vitro | DTD |
| MEF2A | ENSG00000068305 | MADS box | Known motif – High-throughput in vitro | KCTAWAAATAGM |
| MEF2B | ENSG00000213999 | MADS box | Known motif – High-throughput in vitro | TGTTACCATAWHBGG |
| MEF2C | ENSG00000081189 | MADS box | Known motif – High-throughput in vitro | TWCTAWAAATAG |
| MEF2D | ENSG00000116604 | MADS box | Known motif – High-throughput in vitro | DCTAWAAATAGM |
| MEIS1 | ENSG00000143995 | Homeodomain | Known motif – High-throughput in vitro | TGACA |
| MEIS2 | ENSG00000134138 | Homeodomain | Known motif – High-throughput in vitro | TGACASSTGTC |
| MEIS3 | ENSG00000105419 | Homeodomain | Known motif – High-throughput in vitro | TGACAGSTGTCA |
| MEOX1 | ENSG00000005102 | Homeodomain | Known motif – High-throughput in vitro | STAATTA |
| MEOX2 | ENSG00000106511 | Homeodomain | Known motif – High-throughput in vitro | STMATYA |
| MESP1 | ENSG00000166823 | bHLH | Known motif – High-throughput in vitro | HVCACCTGB |
| MESP2 | ENSG00000188095 | bHLH | Known motif – High-throughput in vitro | AMCATATGKYR |
| MGA | ENSG00000174197 | T-box | Known motif – High-throughput in vitro | AGGTGTKAHDTMACACCT |
| MITF | ENSG00000187098 | bHLH | Known motif – from protein with 100% identical DBD – in vitro | RTCACGHG |
| MIXL1 | ENSG00000185155 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| MKX | ENSG00000150051 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| MLX | ENSG00000108788 | bHLH | Known motif – High-throughput in vitro | VCACGTGVY |
| MLXIP | ENSG00000175727 | bHLH | Inferred motif from similar protein – High-throughput in vitro | HCACGTGV |
| MLXIPL | ENSG00000009950 | bHLH | Known motif – High-throughput in vitro | DDCACGTGNH |
| MNT | ENSG00000070444 | bHLH | Known motif – High-throughput in vitro | DNCACGTGB |
| MNX1 | ENSG00000130675 | Homeodomain | Known motif – High-throughput in vitro | HTAATTRNH |
| MSANTD1 | ENSG00000188981 | MADF | Likely sequence specific TF according to literature or domain structure – No motif | |
| MSANTD3 | ENSG00000066697 | MADF | Known motif – High-throughput in vitro | SBNCACTCAM |
| MSANTD4 | ENSG00000170903 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| MSC | ENSG00000178860 | bHLH | Known motif – High-throughput in vitro | RMCAGCTGBYV |
| MSGN1 | ENSG00000151379 | bHLH | Known motif – High-throughput in vitro | VMCAWWTGGY |
| MSX1 | ENSG00000163132 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| MSX2 | ENSG00000120149 | Homeodomain | Known motif – High-throughput in vitro | TAATTGB |
| MTERF1 | ENSG00000127989 | mTERF | Known motif – In vivo/Misc source | TGGTAVWRKTYGGT |
| MTERF2 | ENSG00000120832 | mTERF | Likely sequence specific TF according to literature or domain structure – No motif | |
| MTERF3 | ENSG00000156469 | mTERF | Likely sequence specific TF according to literature or domain structure – No motif | |
| MTERF4 | ENSG00000122085 | mTERF | Likely sequence specific TF according to literature or domain structure – No motif | |
| MTF1 | ENSG00000188786 | C2H2 ZF | Known motif – High-throughput in vitro | TTTGCACACGGCAC |
| MTF2 | ENSG00000143033 | Unknown | Known motif – High-throughput in vitro | |
| MXD1 | ENSG00000059728 | bHLH | Inferred motif from similar protein – In vivo/Misc source | CACGTGAY |
| MXD3 | ENSG00000213347 | bHLH | Inferred motif from similar protein – In vivo/Misc source | CACGTGAY |
| MXD4 | ENSG00000123933 | bHLH | Inferred motif from similar protein – In vivo/Misc source | CACGTGAY |
| MXI1 | ENSG00000119950 | bHLH | Known motif – In vivo/Misc source | CCACGTGG |
| MYB | ENSG00000118513 | Myb/SANT | Known motif – In vivo/Misc source | BAACKGNH |
| MYBL1 | ENSG00000185697 | Myb/SANT | Known motif – High-throughput in vitro | HRACCGTTW |
| MYBL2 | ENSG00000101057 | Myb/SANT | Known motif – High-throughput in vitro | WAACGGTY |
| MYC | ENSG00000136997 | bHLH | Known motif – In vivo/Misc source | RCCACGTGSB |
| MYCL | ENSG00000116990 | bHLH | Inferred motif from similar protein – In vivo/Misc source | RCCACGTG |
| MYCN | ENSG00000134323 | bHLH | Known motif – High-throughput in vitro | VCACGTG |
| MYF5 | ENSG00000111049 | bHLH | Known motif – In vivo/Misc source | VCWSCASSTGYCW |
| MYF6 | ENSG00000111046 | bHLH | Known motif – High-throughput in vitro | RACASSTGWYV |
| MYNN | ENSG00000085274 | C2H2 ZF | Known motif – High-throughput in vitro | AAAWTAARAGYC |
| MYOD1 | ENSG00000129152 | bHLH | Known motif – High-throughput in vitro | YGHCAGSTGKYV |
| MYOG | ENSG00000122180 | bHLH | Known motif – High-throughput in vitro | RACARCTGWCR |
| MYPOP | ENSG00000176182 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| MYRF | ENSG00000124920 | Ndt80/PhoG | Known motif – High-throughput in vitro | TGGTACCA |
| MYRFL | ENSG00000166268 | Ndt80/PhoG | Likely sequence specific TF according to literature or domain structure – No motif | |
| MYSM1 | ENSG00000162601 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| MYT1 | ENSG00000196132 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| MYT1L | ENSG00000186487 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | VAAGTTT |
| MZF1 | ENSG00000099326 | C2H2 ZF | Known motif – In vivo/Misc source | DRDGGGGAD |
| NACC2 | ENSG00000148411 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| NAIF1 | ENSG00000171169 | MADF | Inferred motif from similar protein – High-throughput in vitro | TACGYH |
| NANOG | ENSG00000111704 | Homeodomain | Known motif – High-throughput in vitro | YRABBVB |
| NANOGNB | ENSG00000205857 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| NANOGP8 | ENSG00000255192 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | YRABBVB |
| NCOA1 | ENSG00000084676 | bHLH | Likely sequence specific TF according to literature or domain structure – No motif | |
| NCOA2 | ENSG00000140396 | bHLH | Likely sequence specific TF according to literature or domain structure – No motif | |
| NCOA3 | ENSG00000124151 | bHLH | Likely sequence specific TF according to literature or domain structure – No motif | |
| NEUROD1 | ENSG00000162992 | bHLH | Known motif – High-throughput in vitro | AAWTANNNBRMCATATGKY |
| NEUROD2 | ENSG00000171532 | bHLH | Known motif – High-throughput in vitro | RMCATATGBY |
| NEUROD4 | ENSG00000123307 | bHLH | Inferred motif from similar protein – High-throughput in vitro | AAWTANNNBRMCATATGKY |
| NEUROD6 | ENSG00000164600 | bHLH | Inferred motif from similar protein – High-throughput in vitro | AAWTANNNBRMCATATGKY |
| NEUROG1 | ENSG00000181965 | bHLH | Known motif – High-throughput in vitro | RVCATATGBY |
| NEUROG2 | ENSG00000178403 | bHLH | Known motif – High-throughput in vitro | RVCATATGBY |
| NEUROG3 | ENSG00000122859 | bHLH | Inferred motif from similar protein – High-throughput in vitro | RVCATATGBY |
| NFAT5 | ENSG00000102908 | Rel | Known motif – High-throughput in vitro | RTGGAAAWKTACH |
| NFATC1 | ENSG00000131196 | Rel | Known motif – High-throughput in vitro | RTGGAAAHW |
| NFATC2 | ENSG00000101096 | Rel | Known motif – High-throughput in vitro | DYGGAAANW |
| NFATC3 | ENSG00000072736 | Rel | Known motif – High-throughput in vitro | YGGAAANH |
| NFATC4 | ENSG00000100968 | Rel | Known motif – High-throughput in vitro | YRBWWW |
| NFE2 | ENSG00000123405 | bZIP | Known motif – High-throughput in vitro | VATGACTCATB |
| NFE2L1 | ENSG00000082641 | bZIP | Known motif – In vivo/Misc source | ATGAYD |
| NFE2L2 | ENSG00000116044 | bZIP | Known motif – In vivo/Misc source | VVTGACTMAGCA |
| NFE2L3 | ENSG00000050344 | bZIP | Known motif – In vivo/Misc source | TATTWSCAAGGA |
| NFE4 | ENSG00000230257 | Unknown | Known motif – In vivo/Misc source | VHCCCKMKCCWS |
| NFIA | ENSG00000162599 | SMAD | Known motif – High-throughput in vitro | YTGGCANNNTGCCAA |
| NFIB | ENSG00000147862 | SMAD | Known motif – High-throughput in vitro | TTGGCANNNTGCCAR |
| NFIC | ENSG00000141905 | SMAD | Known motif – High-throughput in vitro | YTGGCANNNNGCCAA |
| NFIL3 | ENSG00000165030 | bZIP | Known motif – High-throughput in vitro | VTTACRTAAY |
| NFIX | ENSG00000008441 | SMAD | Known motif – High-throughput in vitro | TTGGCANNNTGCCAR |
| NFKB1 | ENSG00000109320 | Rel | Known motif – High-throughput in vitro | AGGGGAWTCCCCK |
| NFKB2 | ENSG00000077150 | Rel | Known motif – High-throughput in vitro | VGGGGAWTCCCC |
| NFX1 | ENSG00000086102 | NFX | Likely sequence specific TF according to literature or domain structure – No motif | |
| NFXL1 | ENSG00000170448 | NFX | Likely sequence specific TF according to literature or domain structure – No motif | |
| NFYA | ENSG00000001167 | CBF/NF-Y | Known motif – In vivo/Misc source | HBSYSATTGGYYV |
| NFYB | ENSG00000120837 | Unknown | Known motif – In vivo/Misc source | CTSATTGGYYVVNNB |
| NFYC | ENSG00000066136 | Unknown | Known motif – In vivo/Misc source | BSTSATTGGYYR |
| NHLH1 | ENSG00000171786 | bHLH | Known motif – High-throughput in vitro | DKGRCGCAGCTGMKNCH |
| NHLH2 | ENSG00000177551 | bHLH | Known motif – High-throughput in vitro | DDGNMGCAGCTGCGYCMH |
| NKRF | ENSG00000186416 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| NKX1-1 | ENSG00000235608 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | TAATND |
| NKX1-2 | ENSG00000229544 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | TAAWND |
| NKX2-1 | ENSG00000136352 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | RAGDR |
| NKX2-2 | ENSG00000125820 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | RAGDR |
| NKX2-3 | ENSG00000119919 | Homeodomain | Known motif – High-throughput in vitro | VCACTTV |
| NKX2-4 | ENSG00000125816 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | RAGDR |
| NKX2-5 | ENSG00000183072 | Homeodomain | Known motif – High-throughput in vitro | VCACTTRDV |
| NKX2-6 | ENSG00000180053 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | HYAAGTRB |
| NKX2-8 | ENSG00000136327 | Homeodomain | Known motif – High-throughput in vitro | BTSRAGTGB |
| NKX3-1 | ENSG00000167034 | Homeodomain | Known motif – High-throughput in vitro | TAAGTGS |
| NKX3-2 | ENSG00000109705 | Homeodomain | Known motif – High-throughput in vitro | TAAGTGS |
| NKX6-1 | ENSG00000163623 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | DTDATNR |
| NKX6-2 | ENSG00000148826 | Homeodomain | Known motif – High-throughput in vitro | DTAATTR |
| NKX6-3 | ENSG00000165066 | Homeodomain | Known motif – High-throughput in vitro | WTAATGRB |
| NME2 | ENSG00000243678 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| NOBOX | ENSG00000106410 | Homeodomain | Known motif – High-throughput in vitro | HDATDR |
| NOTO | ENSG00000214513 | Homeodomain | Known motif – High-throughput in vitro | YWMATTA |
| NPAS1 | ENSG00000130751 | bHLH | Inferred motif from similar protein – In vivo/Misc source | VVNGCACGTMBNS |
| NPAS2 | ENSG00000170485 | bHLH | Known motif – High-throughput in vitro | DMCACGTGY |
| NPAS3 | ENSG00000151322 | bHLH | Inferred motif from similar protein – In vivo/Misc source | VVNGCACGTMBNS |
| NPAS4 | ENSG00000174576 | bHLH | Inferred motif from similar protein – High-throughput in vitro | |
| NR0B1 | ENSG00000169297 | Unknown | Known motif – In vivo/Misc source | YBTYCCMCKS |
| NR1D1 | ENSG00000126368 | Nuclear receptor | Known motif – High-throughput in vitro | TGACCYASTRACCYANWW |
| NR1D2 | ENSG00000174738 | Nuclear receptor | Known motif – High-throughput in vitro | YRACMYANTRACMYMNWWH |
| NR1H2 | ENSG00000131408 | Nuclear receptor | Known motif – In vivo/Misc source | TAAAGGTCAAAGGTCAASK |
| NR1H3 | ENSG00000025434 | Nuclear receptor | Inferred motif from similar protein – In vivo/Misc source | TAAAGGTCAAAGGTCAASK |
| NR1H4 | ENSG00000012504 | Nuclear receptor | Known motif – High-throughput in vitro | RGKTCRTTGACCYBNNRGGTBADRGKKBNDRGKTCAHHKD |
| NR1I2 | ENSG00000144852 | Nuclear receptor | Known motif – High-throughput in vitro | YGMMCYBNNYGMMCY |
| NR1I3 | ENSG00000143257 | Nuclear receptor | Known motif – High-throughput in vitro | RGKDYRNNNNRGKKYR |
| NR2C1 | ENSG00000120798 | Nuclear receptor | Known motif – High-throughput in vitro | RGKKCRYGAMMY |
| NR2C2 | ENSG00000177463 | Nuclear receptor | Known motif – High-throughput in vitro | VRGGTCAAAGGTCA |
| NR2E1 | ENSG00000112333 | Nuclear receptor | Known motif – High-throughput in vitro | AAGTCA |
| NR2E3 | ENSG00000278570 | Nuclear receptor | Known motif – High-throughput in vitro | RAGATCAM |
| NR2F1 | ENSG00000175745 | Nuclear receptor | Known motif – High-throughput in vitro | RRGGTCAAAGGTCA |
| NR2F2 | ENSG00000185551 | Nuclear receptor | Known motif – from protein with 100% identical DBD – in vitro | RRGGTCA |
| NR2F6 | ENSG00000160113 | Nuclear receptor | Known motif – High-throughput in vitro | RGGTCAAAGGTCA |
| NR3C1 | ENSG00000113580 | Nuclear receptor | Known motif – High-throughput in vitro | RGWACAYNRTGTWCYH |
| NR3C2 | ENSG00000151623 | Nuclear receptor | Known motif – High-throughput in vitro | RGDACAHDRTGTHCY |
| NR4A1 | ENSG00000123358 | Nuclear receptor | Known motif – High-throughput in vitro | AAAGGTCA |
| NR4A2 | ENSG00000153234 | Nuclear receptor | Known motif – High-throughput in vitro | BTAAAGGTCA |
| NR4A3 | ENSG00000119508 | Nuclear receptor | Known motif – In vivo/Misc source | CAAAGGTCAS |
| NR5A1 | ENSG00000136931 | Nuclear receptor | Known motif – High-throughput in vitro | CAAGGYCR |
| NR5A2 | ENSG00000116833 | Nuclear receptor | Known motif – High-throughput in vitro | YCAAGGTCAH |
| NR6A1 | ENSG00000148200 | Nuclear receptor | Known motif – High-throughput in vitro | SAAGKTCAAGKKYR |
| NRF1 | ENSG00000106459 | Unknown | Known motif – High-throughput in vitro | YRCGCATGCGC |
| NRL | ENSG00000129535 | bZIP | Known motif – High-throughput in vitro | DWHNYGCTGAC |
| OLIG1 | ENSG00000184221 | bHLH | Known motif – High-throughput in vitro | AVCATATGKT |
| OLIG2 | ENSG00000205927 | bHLH | Known motif – High-throughput in vitro | AMCATATGKY |
| OLIG3 | ENSG00000177468 | bHLH | Known motif – High-throughput in vitro | RSCATATGKY |
| ONECUT1 | ENSG00000169856 | CUT; Homeodomain | Known motif – High-throughput in vitro | DDTATCGATYD |
| ONECUT2 | ENSG00000119547 | CUT; Homeodomain | Known motif – High-throughput in vitro | DTATCGATCS |
| ONECUT3 | ENSG00000205922 | CUT; Homeodomain | Known motif – High-throughput in vitro | DWTATYGATTTTY |
| OSR1 | ENSG00000143867 | C2H2 ZF | Known motif – High-throughput in vitro | HACRGTAGC |
| OSR2 | ENSG00000164920 | C2H2 ZF | Known motif – High-throughput in vitro | HVCRGTAGC |
| OTP | ENSG00000171540 | Homeodomain | Known motif – from protein with 100% identical DBD – in vitro | HAATND |
| OTX1 | ENSG00000115507 | Homeodomain | Known motif – High-throughput in vitro | TAATCSB |
| OTX2 | ENSG00000165588 | Homeodomain | Known motif – High-throughput in vitro | HTAATCCB |
| OVOL1 | ENSG00000172818 | C2H2 ZF | Known motif – High-throughput in vitro | RNRTAACGGTHH |
| OVOL2 | ENSG00000125850 | C2H2 ZF | Known motif – High-throughput in vitro | DNNTARCGGD |
| OVOL3 | ENSG00000105261 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PA2G4 | ENSG00000170515 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| PATZ1 | ENSG00000100105 | C2H2 ZF; AT hook | Known motif – In vivo/Misc source | GGGHGGGG |
| PAX1 | ENSG00000125813 | Paired box | Known motif – High-throughput in vitro | SGTCACGCWTSANTGVH |
| PAX2 | ENSG00000075891 | Homeodomain; Paired box | Known motif – High-throughput in vitro | SGTCACGCWTSRNTGVNY |
| PAX3 | ENSG00000135903 | Homeodomain; Paired box | Known motif – High-throughput in vitro | TAATCRATTA |
| PAX4 | ENSG00000106331 | Homeodomain; Paired box | Known motif – High-throughput in vitro | HKAATTAR |
| PAX5 | ENSG00000196092 | Paired box | Known motif – High-throughput in vitro | GTYACGSWTSRNTRVNY |
| PAX6 | ENSG00000007372 | Homeodomain; Paired box | Known motif – High-throughput in vitro | YACGCHYSRNYRMNY |
| PAX7 | ENSG00000009709 | Homeodomain; Paired box | Known motif – High-throughput in vitro | TAATYRATTW |
| PAX8 | ENSG00000125618 | Paired box | Known motif – High-throughput in vitro | RNBYRNYSRWGCGTGACS |
| PAX9 | ENSG00000198807 | Paired box | Known motif – High-throughput in vitro | SGTCACGCWTSANTGM |
| PBX1 | ENSG00000185630 | Homeodomain | Known motif – High-throughput in vitro | TGATKGAYR |
| PBX2 | ENSG00000204304 | Homeodomain | Known motif – In vivo/Misc source | KRVHKTGATTGAWK |
| PBX3 | ENSG00000167081 | Homeodomain | Known motif – In vivo/Misc source | BBBTGATTGRYND |
| PBX4 | ENSG00000105717 | Homeodomain | Known motif – High-throughput in vitro | HDWHH |
| PCGF2 | ENSG00000277258 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| PCGF6 | ENSG00000156374 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| PDX1 | ENSG00000139515 | Homeodomain | Known motif – High-throughput in vitro | BTAATKR |
| PEG3 | ENSG00000198300 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PGR | ENSG00000082175 | Nuclear receptor | Known motif – High-throughput in vitro | RGNACRNNNTGTNCH |
| PHF1 | ENSG00000112511 | Unknown | Known motif – High-throughput in vitro | |
| PHF19 | ENSG00000119403 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| PHF20 | ENSG00000025293 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| PHF21A | ENSG00000135365 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| PHOX2A | ENSG00000165462 | Homeodomain | Known motif – High-throughput in vitro | TAATTRVRTTA |
| PHOX2B | ENSG00000109132 | Homeodomain | Known motif – High-throughput in vitro | TAATTRVRTTA |
| PIN1 | ENSG00000127445 | MBD | Likely sequence specific TF according to literature or domain structure – No motif | |
| PITX1 | ENSG00000069011 | Homeodomain | Known motif – High-throughput in vitro | HTAATCC |
| PITX2 | ENSG00000164093 | Homeodomain | Known motif – High-throughput in vitro | TAAKCC |
| PITX3 | ENSG00000107859 | Homeodomain | Known motif – High-throughput in vitro | HTAATCC |
| PKNOX1 | ENSG00000160199 | Homeodomain | Known motif – High-throughput in vitro | TGACAGCTGTCA |
| PKNOX2 | ENSG00000165495 | Homeodomain | Known motif – High-throughput in vitro | TGACAGSTGTCA |
| PLAG1 | ENSG00000181690 | C2H2 ZF | Known motif – High-throughput in vitro | GGGGCCHWMGGGGG |
| PLAGL1 | ENSG00000118495 | C2H2 ZF | Known motif – In vivo/Misc source | RGGCCCCCYB |
| PLAGL2 | ENSG00000126003 | C2H2 ZF | Known motif – High-throughput in vitro | RGGGGCCC |
| PLSCR1 | ENSG00000188313 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| POGK | ENSG00000143157 | Brinker | Likely sequence specific TF according to literature or domain structure – No motif | |
| POU1F1 | ENSG00000064835 | Homeodomain; POU | Known motif – High-throughput in vitro | DWTATGCWAATKAD |
| POU2AF1 | ENSG00000110777 | Unknown | Known motif – In vivo/Misc source | GATKTGCAKAT |
| POU2F1 | ENSG00000143190 | Homeodomain; POU | Known motif – High-throughput in vitro | WTGMATATKYADD |
| POU2F2 | ENSG00000028277 | Homeodomain; POU | Known motif – High-throughput in vitro | DTGMATATKYADD |
| POU2F3 | ENSG00000137709 | Homeodomain; POU | Known motif – High-throughput in vitro | TATGYWAAT |
| POU3F1 | ENSG00000185668 | Homeodomain; POU | Known motif – High-throughput in vitro | WTATGYWAATD |
| POU3F2 | ENSG00000184486 | Homeodomain; POU | Known motif – High-throughput in vitro | WTATGYWAATKW |
| POU3F3 | ENSG00000198914 | Homeodomain; POU | Known motif – High-throughput in vitro | WWDMWTAWKHAW |
| POU3F4 | ENSG00000196767 | Homeodomain; POU | Known motif – High-throughput in vitro | WDAWTTATKCA |
| POU4F1 | ENSG00000152192 | Homeodomain; POU | Known motif – High-throughput in vitro | TDMATWATKYA |
| POU4F2 | ENSG00000151615 | Homeodomain; POU | Known motif – High-throughput in vitro | BTMATTAAWTATKCA |
| POU4F3 | ENSG00000091010 | Homeodomain; POU | Known motif – High-throughput in vitro | RTNMATWATKYAT |
| POU5F1 | ENSG00000204531 | Homeodomain; POU | Known motif – High-throughput in vitro | WTATGYWAATKWVB |
| POU5F1B | ENSG00000212993 | Homeodomain; POU | Known motif – High-throughput in vitro | TATGYWAAT |
| POU5F2 | ENSG00000248483 | Homeodomain; POU | Likely sequence specific TF according to literature or domain structure – No motif | |
| POU6F1 | ENSG00000184271 | Homeodomain; POU | Known motif – High-throughput in vitro | MTCATTAH |
| POU6F2 | ENSG00000106536 | Homeodomain; POU | Known motif – High-throughput in vitro | DTAATKAGBH |
| PPARA | ENSG00000186951 | Nuclear receptor | Known motif – In vivo/Misc source | DAGGTCA |
| PPARD | ENSG00000112033 | Nuclear receptor | Known motif – High-throughput in vitro | RRGGTCAAAGGTCA |
| PPARG | ENSG00000132170 | Nuclear receptor | Known motif – from protein with 100% identical DBD – in vitro | VNTRMCCYANWDNRACCTWTNVCCYVNW |
| PRDM1 | ENSG00000057657 | C2H2 ZF | Known motif – High-throughput in vitro | RAAAGTGAAAGTD |
| PRDM10 | ENSG00000170325 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRDM12 | ENSG00000130711 | C2H2 ZF | Known motif – In vivo/Misc source | GACAGNTKACC |
| PRDM13 | ENSG00000112238 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRDM14 | ENSG00000147596 | C2H2 ZF | Known motif – In vivo/Misc source | RSTTAGRGACCY |
| PRDM15 | ENSG00000141956 | C2H2 ZF | Known motif – In vivo/Misc source | DTGGAAHTCCMA |
| PRDM16 | ENSG00000142611 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | DAGAYAAGATAANM |
| PRDM2 | ENSG00000116731 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRDM4 | ENSG00000110851 | C2H2 ZF | Known motif – High-throughput in vitro | TTTCAAGGCCCCC |
| PRDM5 | ENSG00000138738 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRDM6 | ENSG00000061455 | C2H2 ZF | Known motif – In vivo/Misc source | RVARDRRAAADDVWRRAAAA |
| PRDM8 | ENSG00000152784 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRDM9 | ENSG00000164256 | C2H2 ZF | Known motif – High-throughput in vitro | VGNGGBNRSGGDGGNNNNARVRRV |
| PREB | ENSG00000138073 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRMT3 | ENSG00000185238 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| PROP1 | ENSG00000175325 | Homeodomain | Known motif – High-throughput in vitro | TAAYYNMATTA |
| PROX1 | ENSG00000117707 | Prospero | Known motif – High-throughput in vitro | BAAGACGYCTTV |
| PROX2 | ENSG00000119608 | Prospero | Inferred motif from similar protein – High-throughput in vitro | BAMGRCGTCDTV |
| PRR12 | ENSG00000126464 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| PRRX1 | ENSG00000116132 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| PRRX2 | ENSG00000167157 | Homeodomain | Known motif – High-throughput in vitro | TAATTRV |
| PTF1A | ENSG00000168267 | bHLH | Known motif – High-throughput in vitro | VYGTCAGCTGTT |
| PURA | ENSG00000185129 | Unknown | Known motif – In vivo/Misc source | CYMBGSCHNCMMMBWCC |
| PURB | ENSG00000146676 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| PURG | ENSG00000172733 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| RAG1 | ENSG00000166349 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| RARA | ENSG00000131759 | Nuclear receptor | Known motif – High-throughput in vitro | RRGGTCANV |
| RARB | ENSG00000077092 | Nuclear receptor | Known motif – High-throughput in vitro | TGACCYYTTGACCYY |
| RARG | ENSG00000172819 | Nuclear receptor | Known motif – High-throughput in vitro | VGGTCA |
| RAX | ENSG00000134438 | Homeodomain | Known motif – High-throughput in vitro | HTAATTR |
| RAX2 | ENSG00000173976 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| RBAK | ENSG00000146587 | C2H2 ZF | Known motif – High-throughput in vitro | VGDRASRARVRRSV |
| RBCK1 | ENSG00000125826 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| RBPJ | ENSG00000168214 | CSL | Known motif – High-throughput in vitro | BTCHCA |
| RBPJL | ENSG00000124232 | CSL | Inferred motif from similar protein – In vivo/Misc source | DTTCCCABR |
| RBSN | ENSG00000131381 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| REL | ENSG00000162924 | Rel | Known motif – In vivo/Misc source | GGAAWNYCCV |
| RELA | ENSG00000173039 | Rel | Known motif – In vivo/Misc source | BKGGAAAKYCCCH |
| RELB | ENSG00000104856 | Rel | Known motif – In vivo/Misc source | DKSAAAKYCCCB |
| REPIN1 | ENSG00000214022 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| REST | ENSG00000084093 | C2H2 ZF | Known motif – In vivo/Misc source | DTCAGSACCWYGGACAGCDSC |
| REXO4 | ENSG00000148300 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| RFX1 | ENSG00000132005 | RFX | Known motif – High-throughput in vitro | BGTTRYCATGRYAACV |
| RFX2 | ENSG00000087903 | RFX | Known motif – High-throughput in vitro | BGTTRCCATGGYAACV |
| RFX3 | ENSG00000080298 | RFX | Known motif – High-throughput in vitro | BGTTDCCATGGYAAC |
| RFX4 | ENSG00000111783 | RFX | Known motif – High-throughput in vitro | GTWRYCATRGHWAC |
| RFX5 | ENSG00000143390 | RFX | Known motif – High-throughput in vitro | BGTTGCYATGGYAACV |
| RFX6 | ENSG00000185002 | RFX | Inferred motif from similar protein – High-throughput in vitro | GTHDYYNNS |
| RFX7 | ENSG00000181827 | RFX | Known motif – High-throughput in vitro | BGTTRCYRY |
| RFX8 | ENSG00000196460 | RFX | Likely sequence specific TF according to literature or domain structure – No motif | |
| RHOXF1 | ENSG00000101883 | Homeodomain | Known motif – High-throughput in vitro | TRAKCCH |
| RHOXF2 | ENSG00000131721 | Homeodomain | Known motif – High-throughput in vitro | TAATCC |
| RHOXF2B | ENSG00000203989 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | TAATCC |
| RLF | ENSG00000117000 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| RORA | ENSG00000069667 | Nuclear receptor | Known motif – High-throughput in vitro | MRAGGTCAAVYYVAGGTCA |
| RORB | ENSG00000198963 | Nuclear receptor | Known motif – High-throughput in vitro | AWNBRGGTCA |
| RORC | ENSG00000143365 | Nuclear receptor | Known motif – High-throughput in vitro | TGMCCYANWTH |
| RREB1 | ENSG00000124782 | C2H2 ZF | Known motif – In vivo/Misc source | MCMCMAMMCAMCMMCHMMSV |
| RUNX1 | ENSG00000159216 | Runt | Known motif – In vivo/Misc source | VACCACAV |
| RUNX2 | ENSG00000124813 | Runt | Known motif – High-throughput in vitro | HRACCRCADWAACCRCAV |
| RUNX3 | ENSG00000020633 | Runt | Known motif – High-throughput in vitro | WAACCRCAR |
| RXRA | ENSG00000186350 | Nuclear receptor | Known motif – High-throughput in vitro | RRGGTCAAAGGTCA |
| RXRB | ENSG00000204231 | Nuclear receptor | Known motif – High-throughput in vitro | RRGGTCAAAGGTCA |
| RXRG | ENSG00000143171 | Nuclear receptor | Known motif – High-throughput in vitro | RRGGTCAAAGGTCA |
| SAFB | ENSG00000160633 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SAFB2 | ENSG00000130254 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SALL1 | ENSG00000103449 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | RYYCAAAAB |
| SALL2 | ENSG00000165821 | C2H2 ZF | Known motif – In vivo/Misc source | CCCACCC |
| SALL3 | ENSG00000256463 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| SALL4 | ENSG00000101115 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | GCTGATAACAGV |
| SATB1 | ENSG00000182568 | CUT; Homeodomain | Known motif – In vivo/Misc source | WKWWWTAAHGRYMNWW |
| SATB2 | ENSG00000119042 | CUT; Homeodomain | Inferred motif from similar protein – In vivo/Misc source | WKWWWTAAHGRYMNWW |
| SCMH1 | ENSG00000010803 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SCML4 | ENSG00000146285 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| SCRT1 | ENSG00000261678 | C2H2 ZF | Known motif – High-throughput in vitro | KCAACAGGTD |
| SCRT2 | ENSG00000215397 | C2H2 ZF | Known motif – High-throughput in vitro | RHGCAACAGGTGB |
| SCX | ENSG00000260428 | bHLH | Inferred motif from similar protein – High-throughput in vitro | VCRKMYGB |
| SEBOX | ENSG00000274529 | Homeodomain | Inferred motif from similar protein – High-throughput in vitro | HTTAATTA |
| SETBP1 | ENSG00000152217 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| SETDB1 | ENSG00000143379 | MBD | Known motif – In vivo/Misc source | RACTHCMDYTCCCRKVRDGCHNYG |
| SETDB2 | ENSG00000136169 | MBD | Likely sequence specific TF according to literature or domain structure – No motif | |
| SGSM2 | ENSG00000141258 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| SHOX | ENSG00000185960 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| SHOX2 | ENSG00000168779 | Homeodomain | Known motif – High-throughput in vitro | BTAATTR |
| SIM1 | ENSG00000112246 | bHLH | Inferred motif from similar protein – In vivo/Misc source | VVNGCACGTMBNS |
| SIM2 | ENSG00000159263 | bHLH | Inferred motif from similar protein – In vivo/Misc source | VVNGCACGTMBNS |
| SIX1 | ENSG00000126778 | Homeodomain | Known motif – High-throughput in vitro | VBGTATCR |
| SIX2 | ENSG00000170577 | Homeodomain | Known motif – High-throughput in vitro | VSGTATCR |
| SIX3 | ENSG00000138083 | Homeodomain | Known motif – High-throughput in vitro | VVTATCR |
| SIX4 | ENSG00000100625 | Homeodomain | Known motif – High-throughput in vitro | VBGTATCRB |
| SIX5 | ENSG00000177045 | Homeodomain | Known motif – In vivo/Misc source | GGAGTTGT |
| SIX6 | ENSG00000184302 | Homeodomain | Known motif – High-throughput in vitro | VBSTATCR |
| SKI | ENSG00000157933 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SKIL | ENSG00000136603 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SKOR1 | ENSG00000188779 | Unknown | Known motif – High-throughput in vitro | WNVKGTAATTAMB |
| SKOR2 | ENSG00000215474 | SAND | Known motif – High-throughput in vitro | WNVKGTAATTAA |
| SLC2A4RG | ENSG00000125520 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| SMAD1 | ENSG00000170365 | SMAD | Known motif – In vivo/Misc source | DRCAGASAGGSH |
| SMAD3 | ENSG00000166949 | SMAD | Known motif – High-throughput in vitro | YGTCTAGACA |
| SMAD4 | ENSG00000141646 | SMAD | Known motif – from protein with 100% identical DBD – in vitro | KCYAGACR |
| SMAD5 | ENSG00000113658 | SMAD | Known motif – High-throughput in vitro | YGTCTAGACW |
| SMAD9 | ENSG00000120693 | SMAD | Known motif – In vivo/Misc source | WGGTCTAGMCMT |
| SMYD3 | ENSG00000185420 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SNAI1 | ENSG00000124216 | C2H2 ZF | Known motif – High-throughput in vitro | VCACCTGY |
| SNAI2 | ENSG00000019549 | C2H2 ZF | Known motif – High-throughput in vitro | RRCAGGTGYR |
| SNAI3 | ENSG00000185669 | C2H2 ZF | Known motif – High-throughput in vitro | DRCAGGTGYR |
| SNAPC2 | ENSG00000104976 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SNAPC4 | ENSG00000165684 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| SNAPC5 | ENSG00000174446 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SOHLH1 | ENSG00000165643 | bHLH | Likely sequence specific TF according to literature or domain structure – No motif | |
| SOHLH2 | ENSG00000120669 | bHLH | Known motif – High-throughput in vitro | BCACGTGC |
| SON | ENSG00000159140 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SOX1 | ENSG00000182968 | HMG/Sox | Known motif – from protein with 100% identical DBD – in vitro | WBAAW |
| SOX10 | ENSG00000100146 | HMG/Sox | Known motif – High-throughput in vitro | DAACAWWGVV |
| SOX11 | ENSG00000176887 | HMG/Sox | Known motif – from protein with 100% identical DBD – in vitro | VACAAW |
| SOX12 | ENSG00000177732 | HMG/Sox | Known motif – High-throughput in vitro | MCCGAACAAT |
| SOX13 | ENSG00000143842 | HMG/Sox | Known motif – from protein with 100% identical DBD – in vitro | RAACAATW |
| SOX14 | ENSG00000168875 | HMG/Sox | Known motif – High-throughput in vitro | WCAATR |
| SOX15 | ENSG00000129194 | HMG/Sox | Known motif – High-throughput in vitro | ATCAATAMCATTGAT |
| SOX17 | ENSG00000164736 | HMG/Sox | Known motif – High-throughput in vitro | DRACAATRV |
| SOX18 | ENSG00000203883 | HMG/Sox | Known motif – High-throughput in vitro | ATCAATGHWATTGAT |
| SOX2 | ENSG00000181449 | HMG/Sox | Known motif – High-throughput in vitro | HATCAATANCATTGATH |
| SOX21 | ENSG00000125285 | HMG/Sox | Known motif – High-throughput in vitro | TCAMTRHCATTGA |
| SOX3 | ENSG00000134595 | HMG/Sox | Known motif – High-throughput in vitro | SBNAMAATRB |
| SOX30 | ENSG00000039600 | HMG/Sox | Known motif – High-throughput in vitro | RACAAT |
| SOX4 | ENSG00000124766 | HMG/Sox | Known motif – High-throughput in vitro | AACAAWGR |
| SOX5 | ENSG00000134532 | HMG/Sox | Known motif – High-throughput in vitro | DVACAATRV |
| SOX6 | ENSG00000110693 | HMG/Sox | Known motif – High-throughput in vitro | DRACAATRV |
| SOX7 | ENSG00000171056 | HMG/Sox | Known motif – High-throughput in vitro | DAACAATKDYAKTGTT |
| SOX8 | ENSG00000005513 | HMG/Sox | Known motif – High-throughput in vitro | HATCAATTKCAGTGAT |
| SOX9 | ENSG00000125398 | HMG/Sox | Known motif – High-throughput in vitro | DDACAATRV |
| SP1 | ENSG00000185591 | C2H2 ZF | Known motif – High-throughput in vitro | RCCMCDCCCMH |
| SP100 | ENSG00000067066 | SAND | Likely sequence specific TF according to literature or domain structure – No motif | |
| SP110 | ENSG00000135899 | SAND | Likely sequence specific TF according to literature or domain structure – No motif | |
| SP140 | ENSG00000079263 | SAND | Likely sequence specific TF according to literature or domain structure – No motif | |
| SP140L | ENSG00000185404 | SAND | Likely sequence specific TF according to literature or domain structure – No motif | |
| SP2 | ENSG00000167182 | C2H2 ZF | Known motif – High-throughput in vitro | YWAGYCCCGCCCMCYH |
| SP3 | ENSG00000172845 | C2H2 ZF | Known motif – High-throughput in vitro | VCCMCRCCCMY |
| SP4 | ENSG00000105866 | C2H2 ZF | Known motif – High-throughput in vitro | WRGCCACGCCCMCHY |
| SP5 | ENSG00000204335 | C2H2 ZF | Known motif – In vivo/Misc source | ACCVCGCCKCCSS |
| SP6 | ENSG00000189120 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | HNGCCACGCCCARK |
| SP7 | ENSG00000170374 | C2H2 ZF | Known motif – In vivo/Misc source | VBNSGGGGNGG |
| SP8 | ENSG00000164651 | C2H2 ZF | Known motif – High-throughput in vitro | VMCACBCCCMCH |
| SP9 | ENSG00000217236 | C2H2 ZF | Known motif – High-throughput in vitro | VMCMCGCCCMYH |
| SPDEF | ENSG00000124664 | Ets | Known motif – High-throughput in vitro | AMCCGGATRTD |
| SPEN | ENSG00000065526 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| SPI1 | ENSG00000066336 | Ets | Known motif – High-throughput in vitro | RAAAAGMGGAAGTW |
| SPIB | ENSG00000269404 | Ets | Known motif – High-throughput in vitro | WWWRVGGAAST |
| SPIC | ENSG00000166211 | Ets | Known motif – High-throughput in vitro | RAAWSVGGAAGTM |
| SPZ1 | ENSG00000164299 | Unknown | Known motif – In vivo/Misc source | GGSDGWWMCVBHBG |
| SRCAP | ENSG00000080603 | AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| SREBF1 | ENSG00000072310 | bHLH | Known motif – High-throughput in vitro | VHCACVCSAY |
| SREBF2 | ENSG00000198911 | bHLH | Known motif – High-throughput in vitro | RTCACGTGAY |
| SRF | ENSG00000112658 | MADS box | Known motif – High-throughput in vitro | DCCWTATATGGT |
| SRY | ENSG00000184895 | HMG/Sox | Known motif – High-throughput in vitro | AACAATGNTATTGTT |
| ST18 | ENSG00000147488 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | VAAGTTT |
| STAT1 | ENSG00000115415 | STAT | Known motif – In vivo/Misc source | HTTCCYRGAAR |
| STAT2 | ENSG00000170581 | STAT | Known motif – In vivo/Misc source | TNRGTTTCDNTTYC |
| STAT3 | ENSG00000168610 | STAT | Known motif – In vivo/Misc source | HTTCCYRKMA |
| STAT4 | ENSG00000138378 | STAT | Known motif – In vivo/Misc source | BDHTTCTBGKAAD |
| STAT5A | ENSG00000126561 | STAT | Known motif – In vivo/Misc source | YTTCYNRGAAHY |
| STAT5B | ENSG00000173757 | STAT | Known motif – In vivo/Misc source | ADTTCYHRGAAA |
| STAT6 | ENSG00000166888 | STAT | Known motif – In vivo/Misc source | DWTTYCNDDGAA |
| T | ENSG00000164458 | T-box | Known motif – High-throughput in vitro | ANGTGYGAHWWNTVRCACCT |
| TAL1 | ENSG00000162367 | bHLH | Known motif – In vivo/Misc source | RNCAGVTGGH |
| TAL2 | ENSG00000186051 | bHLH | Inferred motif from similar protein – In vivo/Misc source | RNCAGVTGGH |
| TBP | ENSG00000112592 | TBP | Known motif – from protein with 100% identical DBD – in vitro | WWWWAW |
| TBPL1 | ENSG00000028839 | TBP | Likely sequence specific TF according to literature or domain structure – No motif | |
| TBPL2 | ENSG00000182521 | TBP | Inferred motif from similar protein – High-throughput in vitro | WWWWAW |
| TBR1 | ENSG00000136535 | T-box | Known motif – High-throughput in vitro | TTCACACCT |
| TBX1 | ENSG00000184058 | T-box | Known motif – High-throughput in vitro | TCACACCT |
| TBX10 | ENSG00000167800 | T-box | Inferred motif from similar protein – High-throughput in vitro | BYTCACACCYHV |
| TBX15 | ENSG00000092607 | T-box | Known motif – High-throughput in vitro | TCACACCT |
| TBX18 | ENSG00000112837 | T-box | Known motif – High-throughput in vitro | BYTCACACCTHH |
| TBX19 | ENSG00000143178 | T-box | Known motif – High-throughput in vitro | TMRCACNTABGTGYBAH |
| TBX2 | ENSG00000121068 | T-box | Known motif – High-throughput in vitro | VRCRC |
| TBX20 | ENSG00000164532 | T-box | Known motif – High-throughput in vitro | TCACRCBYTMACACCT |
| TBX21 | ENSG00000073861 | T-box | Known motif – High-throughput in vitro | WTCACACCTH |
| TBX22 | ENSG00000122145 | T-box | Known motif – In vivo/Misc source | AGGTGWSAAWTTCACACCT |
| TBX3 | ENSG00000135111 | T-box | Known motif – High-throughput in vitro | YVACACSH |
| TBX4 | ENSG00000121075 | T-box | Known motif – High-throughput in vitro | TVACACCT |
| TBX5 | ENSG00000089225 | T-box | Known motif – High-throughput in vitro | TVACACCT |
| TBX6 | ENSG00000149922 | T-box | Known motif – High-throughput in vitro | TVACACSY |
| TCF12 | ENSG00000140262 | bHLH | Known motif – High-throughput in vitro | VCACSTGB |
| TCF15 | ENSG00000125878 | bHLH | Inferred motif from similar protein – High-throughput in vitro | VCRKMYGB |
| TCF20 | ENSG00000100207 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| TCF21 | ENSG00000118526 | bHLH | Known motif – High-throughput in vitro | RVCAGCTGTTV |
| TCF23 | ENSG00000163792 | bHLH | Inferred motif from similar protein – High-throughput in vitro | VCRKMYGB |
| TCF24 | ENSG00000261787 | bHLH | Inferred motif from similar protein – High-throughput in vitro | RMCAKMTGK |
| TCF3 | ENSG00000071564 | bHLH | Known motif – High-throughput in vitro | VCAGGTGB |
| TCF4 | ENSG00000196628 | bHLH | Known motif – High-throughput in vitro | HRCACCTGB |
| TCF7 | ENSG00000081059 | HMG/Sox | Known motif – High-throughput in vitro | DSATCAAWS |
| TCF7L1 | ENSG00000152284 | HMG/Sox | Known motif – High-throughput in vitro | AAAGATCAAAGG |
| TCF7L2 | ENSG00000148737 | HMG/Sox | Known motif – from protein with 100% identical DBD – in vitro | SWTCAAAV |
| TCFL5 | ENSG00000101190 | bHLH | Known motif – High-throughput in vitro | KCRCGCGCHC |
| TEAD1 | ENSG00000187079 | TEA | Known motif – High-throughput in vitro | RCATTCCDH |
| TEAD2 | ENSG00000074219 | TEA | Known motif – High-throughput in vitro | YRCATTCCW |
| TEAD3 | ENSG00000007866 | TEA | Known motif – High-throughput in vitro | RCATTCYDNDCATWCCD |
| TEAD4 | ENSG00000197905 | TEA | Known motif – High-throughput in vitro | RMATTCYD |
| TEF | ENSG00000167074 | bZIP | Known motif – High-throughput in vitro | VTTACRTAAB |
| TERB1 | ENSG00000249961 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| TERF1 | ENSG00000147601 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| TERF2 | ENSG00000132604 | Myb/SANT | Inferred motif from similar protein – High-throughput in vitro | AACCCTAV |
| TET1 | ENSG00000138336 | CxxC | Known motif – High-throughput in vitro | HVCGH |
| TET2 | ENSG00000168769 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| TET3 | ENSG00000187605 | CxxC | Likely sequence specific TF according to literature or domain structure – No motif | |
| TFAP2A | ENSG00000137203 | AP-2 | Known motif – High-throughput in vitro | HSCCYBVRGGCD |
| TFAP2B | ENSG00000008196 | AP-2 | Known motif – High-throughput in vitro | SCCBNVGGS |
| TFAP2C | ENSG00000087510 | AP-2 | Known motif – High-throughput in vitro | HGCCYBVRGGSD |
| TFAP2D | ENSG00000008197 | AP-2 | Known motif – In vivo/Misc source | RCGNGCCBCRGVCB |
| TFAP2E | ENSG00000116819 | AP-2 | Known motif – High-throughput in vitro | HSCCYSRGGSD |
| TFAP4 | ENSG00000090447 | bHLH | Known motif – High-throughput in vitro | VWCAGCTGWB |
| TFCP2 | ENSG00000135457 | Grainyhead | Known motif – High-throughput in vitro | WCCGGWWHDAWCYGGW |
| TFCP2L1 | ENSG00000115112 | Grainyhead | Known motif – High-throughput in vitro | DCYRGHNNNDDCYRGH |
| TFDP1 | ENSG00000198176 | E2F | Known motif – In vivo/Misc source | DYYTCSCGCYMWWY |
| TFDP2 | ENSG00000114126 | E2F | Inferred motif from similar protein – In vivo/Misc source | DYYTCSCGCYMWWY |
| TFDP3 | ENSG00000183434 | E2F | Inferred motif from similar protein – In vivo/Misc source | DYYTCSCGCYMWWY |
| TFE3 | ENSG00000068323 | bHLH | Known motif – High-throughput in vitro | RKCACGTGNB |
| TFEB | ENSG00000112561 | bHLH | Known motif – High-throughput in vitro | RNCACGTGAY |
| TFEC | ENSG00000105967 | bHLH | Known motif – High-throughput in vitro | RNCACRTGAB |
| TGIF1 | ENSG00000177426 | Homeodomain | Known motif – High-throughput in vitro | TGACAGCTGTCA |
| TGIF2 | ENSG00000118707 | Homeodomain | Known motif – High-throughput in vitro | TGACABVTGTCA |
| TGIF2LX | ENSG00000153779 | Homeodomain | Known motif – High-throughput in vitro | TGACASSTGTCA |
| TGIF2LY | ENSG00000176679 | Homeodomain | Known motif – High-throughput in vitro | TGACABVTGTCA |
| THAP1 | ENSG00000131931 | THAP finger | Known motif – In vivo/Misc source | BYYGCCMKNANYMAAVATGGCSV |
| THAP10 | ENSG00000129028 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP11 | ENSG00000168286 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP12 | ENSG00000137492 | THAP finger | Known motif – High-throughput in vitro | YMBNNBGR |
| THAP2 | ENSG00000173451 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP3 | ENSG00000041988 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP4 | ENSG00000176946 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP5 | ENSG00000177683 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP6 | ENSG00000174796 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP7 | ENSG00000184436 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP8 | ENSG00000161277 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THAP9 | ENSG00000168152 | THAP finger | Likely sequence specific TF according to literature or domain structure – No motif | |
| THRA | ENSG00000126351 | Nuclear receptor | Known motif – High-throughput in vitro | DTGACCTBATRAGGTCAH |
| THRB | ENSG00000151090 | Nuclear receptor | Known motif – High-throughput in vitro | TGWCCTBRNYVAGGWCA |
| THYN1 | ENSG00000151500 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| TIGD1 | ENSG00000221944 | CENPB | Known motif – High-throughput in vitro | SCGCAATA |
| TIGD2 | ENSG00000180346 | CENPB | Inferred motif from similar protein – High-throughput in vitro | RCGGWWR |
| TIGD3 | ENSG00000173825 | CENPB | Likely sequence specific TF according to literature or domain structure – No motif | |
| TIGD4 | ENSG00000169989 | CENPB | Likely sequence specific TF according to literature or domain structure – No motif | |
| TIGD5 | ENSG00000179886 | CENPB | Likely sequence specific TF according to literature or domain structure – No motif | |
| TIGD6 | ENSG00000164296 | CENPB | Inferred motif from similar protein – High-throughput in vitro | WVCRWA |
| TIGD7 | ENSG00000140993 | CENPB | Likely sequence specific TF according to literature or domain structure – No motif | |
| TLX1 | ENSG00000107807 | Homeodomain | Known motif – In vivo/Misc source | VCHHVTTRVCV |
| TLX2 | ENSG00000115297 | Homeodomain | Known motif – High-throughput in vitro | BTAATTR |
| TLX3 | ENSG00000164438 | Homeodomain | Known motif – High-throughput in vitro | AATKGNNNNNNNNNNNNNCAATT |
| TMF1 | ENSG00000144747 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| TOPORS | ENSG00000197579 | Unknown | Known motif – In vivo/Misc source | TCCCAGCTACTTTGGGA |
| TP53 | ENSG00000141510 | p53 | Known motif – In vivo/Misc source | DRCATGYYBRGRCATGYCY |
| TP63 | ENSG00000073282 | p53 | Known motif – High-throughput in vitro | DACATGTYVYRACATGTY |
| TP73 | ENSG00000078900 | p53 | Known motif – In vivo/Misc source | DRRCAWGYHCWGRCWTGYH |
| TPRX1 | ENSG00000178928 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| TRAFD1 | ENSG00000135148 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| TRERF1 | ENSG00000124496 | C2H2 ZF; Myb/SANT | Inferred motif from similar protein – In vivo/Misc source | AGACKTTAGTCA |
| TRPS1 | ENSG00000104447 | GATA | Known motif – In vivo/Misc source | HWSRARATAGWDDMH |
| TSC22D1 | ENSG00000102804 | Unknown | Likely sequence specific TF according to literature or domain structure – No motif | |
| TSHZ1 | ENSG00000179981 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| TSHZ2 | ENSG00000182463 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| TSHZ3 | ENSG00000121297 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| TTF1 | ENSG00000125482 | Myb/SANT | Likely sequence specific TF according to literature or domain structure – No motif | |
| TWIST1 | ENSG00000122691 | bHLH | Known motif – In vivo/Misc source | MHVCACHTGSD |
| TWIST2 | ENSG00000233608 | bHLH | Known motif – from protein with 100% identical DBD – in vitro | MCATATGT |
| UBP1 | ENSG00000153560 | Grainyhead | Known motif – High-throughput in vitro | DCYRGHNNNNDCYRGH |
| UNCX | ENSG00000164853 | Homeodomain | Known motif – High-throughput in vitro | TAATTR |
| USF1 | ENSG00000158773 | bHLH | Known motif – High-throughput in vitro | RNCACGTGRY |
| USF2 | ENSG00000105698 | bHLH | Known motif – High-throughput in vitro | VCACGTGVC |
| USF3 | ENSG00000176542 | bHLH | Likely sequence specific TF according to literature or domain structure – No motif | |
| VAX1 | ENSG00000148704 | Homeodomain | Known motif – High-throughput in vitro | YTAATKA |
| VAX2 | ENSG00000116035 | Homeodomain | Known motif – High-throughput in vitro | YTAATKA |
| VDR | ENSG00000111424 | Nuclear receptor | Known motif – High-throughput in vitro | TGAACYCDRTGAACYC |
| VENTX | ENSG00000151650 | Homeodomain | Known motif – High-throughput in vitro | VNTAATBR |
| VEZF1 | ENSG00000136451 | C2H2 ZF | Known motif – High-throughput in vitro | RKGGGGGG |
| VSX1 | ENSG00000100987 | Homeodomain | Known motif – High-throughput in vitro | TAATTRS |
| VSX2 | ENSG00000119614 | Homeodomain | Known motif – High-throughput in vitro | YTAATTA |
| WIZ | ENSG00000011451 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| WT1 | ENSG00000184937 | C2H2 ZF | Known motif – High-throughput in vitro | BGGGGGRG |
| XBP1 | ENSG00000100219 | bZIP | Known motif – High-throughput in vitro | GVTGACGTGKCVHW |
| XPA | ENSG00000136936 | Unknown | Known motif – High-throughput in vitro | VCACCTCACMY |
| YBX1 | ENSG00000065978 | CSD | Known motif – High-throughput in vitro | YGTWCCAYC |
| YBX2 | ENSG00000006047 | CSD | Inferred motif from similar protein – High-throughput in vitro | YGTWCCAYC |
| YBX3 | ENSG00000060138 | CSD | Known motif – from protein with 100% identical DBD – in vitro | YGTWCCAYC |
| YY1 | ENSG00000100811 | C2H2 ZF | Known motif – High-throughput in vitro | HRWNATGGCB |
| YY2 | ENSG00000230797 | C2H2 ZF | Known motif – High-throughput in vitro | DDNATGGCGG |
| ZBED1 | ENSG00000214717 | BED ZF | Known motif – High-throughput in vitro | YATGTCGCGAYAD |
| ZBED2 | ENSG00000177494 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBED3 | ENSG00000132846 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBED4 | ENSG00000100426 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBED5 | ENSG00000236287 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBED6 | ENSG00000257315 | BED ZF | Inferred motif from similar protein – In vivo/Misc source | VVRGCGAGCYYV |
| ZBED9 | ENSG00000232040 | BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB1 | ENSG00000126804 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | HMMCGCRH |
| ZBTB10 | ENSG00000205189 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB11 | ENSG00000066422 | C2H2 ZF | Known motif – In vivo/Misc source | GGGGKGCRCMCA |
| ZBTB12 | ENSG00000204366 | C2H2 ZF | Known motif – High-throughput in vitro | CTAGAACMB |
| ZBTB14 | ENSG00000198081 | C2H2 ZF | Known motif – High-throughput in vitro | VDCGTGCACGCGCRH |
| ZBTB16 | ENSG00000109906 | C2H2 ZF | Known motif – In vivo/Misc source | BTVNWYBKVHKBTAAADYWKKRHYWRDKY |
| ZBTB17 | ENSG00000116809 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB18 | ENSG00000179456 | C2H2 ZF | Known motif – High-throughput in vitro | DKCCAGATGTK |
| ZBTB2 | ENSG00000181472 | C2H2 ZF | Known motif – High-throughput in vitro | DKWACCGGRA |
| ZBTB20 | ENSG00000181722 | C2H2 ZF | Known motif – High-throughput in vitro | VYATACRTYV |
| ZBTB21 | ENSG00000173276 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB22 | ENSG00000236104 | C2H2 ZF | Known motif – High-throughput in vitro | HKCACWAYNRTWGTGMD |
| ZBTB24 | ENSG00000112365 | C2H2 ZF; AT hook | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB25 | ENSG00000089775 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB26 | ENSG00000171448 | C2H2 ZF | Known motif – High-throughput in vitro | DHTCYAGAAHR |
| ZBTB3 | ENSG00000185670 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | DSCAGYK |
| ZBTB32 | ENSG00000011590 | C2H2 ZF | Known motif – High-throughput in vitro | HGTACAGTRWYACTGTACD |
| ZBTB33 | ENSG00000177485 | C2H2 ZF | Known motif – In vivo/Misc source | SVNTCTCGCGAGANB |
| ZBTB34 | ENSG00000177125 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | DTCGGCYAABDCGGCA |
| ZBTB37 | ENSG00000185278 | C2H2 ZF | Known motif – High-throughput in vitro | DTCGGCYAABDCGGCA |
| ZBTB38 | ENSG00000177311 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB39 | ENSG00000166860 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB4 | ENSG00000174282 | C2H2 ZF | Known motif – In vivo/Misc source | CVCHAHCRCYMTBG |
| ZBTB40 | ENSG00000184677 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB41 | ENSG00000177888 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB42 | ENSG00000179627 | C2H2 ZF | Known motif – High-throughput in vitro | MRCAKCTGS |
| ZBTB43 | ENSG00000169155 | C2H2 ZF | Known motif – High-throughput in vitro | GTGCTRNNNNNDDGGCAC |
| ZBTB44 | ENSG00000196323 | C2H2 ZF | Known motif – High-throughput in vitro | RMTGCAKB |
| ZBTB45 | ENSG00000119574 | C2H2 ZF | Known motif – High-throughput in vitro | BMTATAGGBR |
| ZBTB46 | ENSG00000130584 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB47 | ENSG00000114853 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB48 | ENSG00000204859 | C2H2 ZF | Known motif – In vivo/Misc source | YHAGGGANHDD |
| ZBTB49 | ENSG00000168826 | C2H2 ZF | Known motif – High-throughput in vitro | TGACVBGYCARGCRRAA |
| ZBTB5 | ENSG00000168795 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB6 | ENSG00000186130 | C2H2 ZF | Known motif – In vivo/Misc source | VGRTGMTRGAGCC |
| ZBTB7A | ENSG00000178951 | C2H2 ZF | Known motif – High-throughput in vitro | RCGACCACCNV |
| ZBTB7B | ENSG00000160685 | C2H2 ZF | Known motif – High-throughput in vitro | DCGACCMCCVA |
| ZBTB7C | ENSG00000184828 | C2H2 ZF | Known motif – High-throughput in vitro | DCRACCACCVH |
| ZBTB8A | ENSG00000160062 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB8B | ENSG00000273274 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZBTB9 | ENSG00000213588 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZC3H8 | ENSG00000144161 | CCCH ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZEB1 | ENSG00000148516 | C2H2 ZF; Homeodomain | Known motif – In vivo/Misc source | CAGGTGNR |
| ZEB2 | ENSG00000169554 | C2H2 ZF; Homeodomain | Inferred motif from similar protein – In vivo/Misc source | CAGGTGNR |
| ZFAT | ENSG00000066827 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZFHX2 | ENSG00000136367 | Homeodomain | Known motif – High-throughput in vitro | TRATYA |
| ZFHX3 | ENSG00000140836 | C2H2 ZF; Homeodomain | Known motif – High-throughput in vitro | RMTND |
| ZFHX4 | ENSG00000091656 | C2H2 ZF; Homeodomain | Inferred motif from similar protein – In vivo/Misc source | WAATWAWTAAY |
| ZFP1 | ENSG00000184517 | C2H2 ZF | Known motif – High-throughput in vitro | TDYBATACCCANHH |
| ZFP14 | ENSG00000142065 | C2H2 ZF | Known motif – High-throughput in vitro | GGAGSHHHHDGARHK |
| ZFP2 | ENSG00000198939 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | RGRAAVYGAAACT |
| ZFP28 | ENSG00000196867 | C2H2 ZF | Known motif – High-throughput in vitro | AYMNHWRARGAAAHDGARMKVHHDNDNNDNNH |
| ZFP3 | ENSG00000180787 | C2H2 ZF | Known motif – High-throughput in vitro | GGNTGNRTAGGAGYTYDB |
| ZFP30 | ENSG00000120784 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | RAHRNRGYTRNRDRNRG |
| ZFP37 | ENSG00000136866 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZFP41 | ENSG00000181638 | C2H2 ZF | Known motif – High-throughput in vitro | RYGGAGAGTTAGC |
| ZFP42 | ENSG00000179059 | C2H2 ZF | Known motif – High-throughput in vitro | CAAKATGGCBGHC |
| ZFP57 | ENSG00000204644 | C2H2 ZF | Known motif – In vivo/Misc source | SNNVNNVBTGCCGCV |
| ZFP62 | ENSG00000196670 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZFP64 | ENSG00000020256 | C2H2 ZF | Known motif – In vivo/Misc source | VGGRSCCCGGGVVNS |
| ZFP69 | ENSG00000187815 | C2H2 ZF | Known motif – High-throughput in vitro | GWGRCTRGAWAC |
| ZFP69B | ENSG00000187801 | C2H2 ZF | Known motif – High-throughput in vitro | GTGGCTGGARVV |
| ZFP82 | ENSG00000181007 | C2H2 ZF | Known motif – High-throughput in vitro | AGAATTAGTRAAYTGGAARAY |
| ZFP90 | ENSG00000184939 | C2H2 ZF | Known motif – High-throughput in vitro | RYACTGCTTTWG |
| ZFP91 | ENSG00000186660 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZFP92 | ENSG00000189420 | C2H2 ZF | Known motif – In vivo/Misc source | MGATAAAAKGM |
| ZFPM1 | ENSG00000179588 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZFPM2 | ENSG00000169946 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZFX | ENSG00000005889 | C2H2 ZF | Known motif – In vivo/Misc source | VVSVSBNBBAGGCCBVGSH |
| ZFY | ENSG00000067646 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | BAGGCCBVGSYBVV |
| ZGLP1 | ENSG00000220201 | GATA | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZGPAT | ENSG00000197114 | CCCH ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZHX1 | ENSG00000165156 | Homeodomain | Known motif – High-throughput in vitro | DYB |
| ZHX2 | ENSG00000178764 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZHX3 | ENSG00000174306 | Homeodomain | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZIC1 | ENSG00000152977 | C2H2 ZF | Known motif – High-throughput in vitro | DCRCAGCRGGGGGBV |
| ZIC2 | ENSG00000043355 | C2H2 ZF | Known motif – from protein with 100% identical DBD – in vitro | YNRBRKG |
| ZIC3 | ENSG00000156925 | C2H2 ZF | Known motif – High-throughput in vitro | KCACAGCRGGGGGTCB |
| ZIC4 | ENSG00000174963 | C2H2 ZF | Known motif – High-throughput in vitro | DCNCHRCRGGGGGYM |
| ZIC5 | ENSG00000139800 | C2H2 ZF | Known motif – High-throughput in vitro | DCDCAGCGGGGGGTM |
| ZIK1 | ENSG00000171649 | C2H2 ZF | Known motif – High-throughput in vitro | RDRRCAAWRGCAMNRVRWNNB |
| ZIM2 | ENSG00000269699 | C2H2 ZF | Known motif – In vivo/Misc source | YCNBSYBSCYTYYYCHBCCVGCCYGKGGYY |
| ZIM3 | ENSG00000141946 | C2H2 ZF | Known motif – High-throughput in vitro | RNHAACAGAAANCYM |
| ZKSCAN1 | ENSG00000106261 | C2H2 ZF | Known motif – High-throughput in vitro | CCTACTAHGH |
| ZKSCAN2 | ENSG00000155592 | C2H2 ZF | Known motif – High-throughput in vitro | RRRRRMMAC |
| ZKSCAN3 | ENSG00000189298 | C2H2 ZF | Known motif – High-throughput in vitro | TCGAGGYTAGMCCA |
| ZKSCAN4 | ENSG00000187626 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZKSCAN5 | ENSG00000196652 | C2H2 ZF | Known motif – High-throughput in vitro | DGGAGGTGA |
| ZKSCAN7 | ENSG00000196345 | C2H2 ZF | Known motif – High-throughput in vitro | VYAHACTKTNRAGYGV |
| ZKSCAN8 | ENSG00000198315 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZMAT1 | ENSG00000166432 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZMAT4 | ENSG00000165061 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF10 | ENSG00000256223 | C2H2 ZF | Known motif – High-throughput in vitro | TGAGGT |
| ZNF100 | ENSG00000197020 | C2H2 ZF | Known motif – High-throughput in vitro | VBRNGGCGGCGGCNB |
| ZNF101 | ENSG00000181896 | C2H2 ZF | Known motif – High-throughput in vitro | VDGYKGCCCCHGTRTCH |
| ZNF107 | ENSG00000196247 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF112 | ENSG00000062370 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF114 | ENSG00000178150 | C2H2 ZF | Known motif – In vivo/Misc source | VSSSBSBVVSSBSSSSYHTWTATABVSB |
| ZNF117 | ENSG00000152926 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | GKGCWGCAGM |
| ZNF12 | ENSG00000164631 | C2H2 ZF | Known motif – High-throughput in vitro | VYGCKRTAACAARYAKSMCC |
| ZNF121 | ENSG00000197961 | C2H2 ZF | Known motif – High-throughput in vitro | VCDGGVCMRVDBWGYVNGRYCCH |
| ZNF124 | ENSG00000196418 | C2H2 ZF | Known motif – High-throughput in vitro | AAGAAGGCTTTAATYRGG |
| ZNF131 | ENSG00000172262 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF132 | ENSG00000131849 | C2H2 ZF | Known motif – High-throughput in vitro | VRGGARRGNRGGARG |
| ZNF133 | ENSG00000125846 | C2H2 ZF | Known motif – High-throughput in vitro | DGRNMCAAMWNANGTAHAAKTGGHDNH |
| ZNF134 | ENSG00000213762 | C2H2 ZF | Known motif – High-throughput in vitro | VYTMAKCAGKKGMNG |
| ZNF135 | ENSG00000176293 | C2H2 ZF | Known motif – High-throughput in vitro | HHYTGAGGTYGAGCY |
| ZNF136 | ENSG00000196646 | C2H2 ZF | Known motif – High-throughput in vitro | TTCTTGGTTGRCAGKTTT |
| ZNF138 | ENSG00000197008 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF14 | ENSG00000105708 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF140 | ENSG00000196387 | C2H2 ZF | Known motif – High-throughput in vitro | GAGCGGAATTGYH |
| ZNF141 | ENSG00000131127 | C2H2 ZF | Known motif – High-throughput in vitro | RVKGRGRGYGKCCCCC |
| ZNF142 | ENSG00000115568 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF143 | ENSG00000166478 | C2H2 ZF | Known motif – High-throughput in vitro | YWCCCAYAATGCAYYG |
| ZNF146 | ENSG00000167635 | C2H2 ZF | Known motif – High-throughput in vitro | GGARTAYTABDCAGC |
| ZNF148 | ENSG00000163848 | C2H2 ZF | Known motif – In vivo/Misc source | DGKGGGRGGD |
| ZNF154 | ENSG00000179909 | C2H2 ZF | Known motif – High-throughput in vitro | TGTCTAGTARRTCYD |
| ZNF155 | ENSG00000204920 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF157 | ENSG00000147117 | C2H2 ZF | Known motif – High-throughput in vitro | KNNDNGYRYAYTGHWDNCCYYVCCADGHCH |
| ZNF16 | ENSG00000170631 | C2H2 ZF | Known motif – High-throughput in vitro | GAGCCAYDGMRGGYKBTD |
| ZNF160 | ENSG00000170949 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF165 | ENSG00000197279 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF169 | ENSG00000175787 | C2H2 ZF | Known motif – High-throughput in vitro | CTCCCT |
| ZNF17 | ENSG00000186272 | C2H2 ZF | Known motif – High-throughput in vitro | VNBNNNNNSTKYMTGYTCHKGNNNV |
| ZNF174 | ENSG00000103343 | C2H2 ZF | Known motif – High-throughput in vitro | GSCRAGTGAYYGNC |
| ZNF175 | ENSG00000105497 | C2H2 ZF | Known motif – In vivo/Misc source | CYAYACAHRAYAADGAATACA |
| ZNF177 | ENSG00000188629 | C2H2 ZF | Known motif – High-throughput in vitro | BTYGRTCKMRNKKNNVAGTCATD |
| ZNF18 | ENSG00000154957 | C2H2 ZF | Known motif – High-throughput in vitro | SNRTTCACACY |
| ZNF180 | ENSG00000167384 | C2H2 ZF | Known motif – High-throughput in vitro | VGGGVSNGGNGGSGRSBGSGGCVV |
| ZNF181 | ENSG00000197841 | C2H2 ZF | Known motif – High-throughput in vitro | VYYYSWGSTWSTNGGRMKGMKGHB |
| ZNF182 | ENSG00000147118 | C2H2 ZF | Known motif – High-throughput in vitro | AAAAMMAAAARMAAA |
| ZNF184 | ENSG00000096654 | C2H2 ZF | Known motif – High-throughput in vitro | TGGWGARGA |
| ZNF189 | ENSG00000136870 | C2H2 ZF | Known motif – High-throughput in vitro | VDGGAASRGMVDNDS |
| ZNF19 | ENSG00000157429 | C2H2 ZF | Known motif – High-throughput in vitro | DRGGVBHHDGACRNNDV |
| ZNF195 | ENSG00000005801 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF197 | ENSG00000186448 | C2H2 ZF | Known motif – High-throughput in vitro | RRRGWCARRRRVVVR |
| ZNF2 | ENSG00000275111 | C2H2 ZF | Known motif – High-throughput in vitro | SCVCVGVGCYGCGC |
| ZNF20 | ENSG00000132010 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF200 | ENSG00000010539 | C2H2 ZF | Known motif – High-throughput in vitro | BVNVSCGGAAGY |
| ZNF202 | ENSG00000166261 | C2H2 ZF | Known motif – In vivo/Misc source | CSCNBCYYCCDCYBCYBSBBCSBSBSCYB |
| ZNF205 | ENSG00000122386 | C2H2 ZF | Known motif – In vivo/Misc source | TGGAAT |
| ZNF207 | ENSG00000010244 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF208 | ENSG00000160321 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF211 | ENSG00000121417 | C2H2 ZF | Known motif – High-throughput in vitro | HNYATATACCAB |
| ZNF212 | ENSG00000170260 | C2H2 ZF | Known motif – In vivo/Misc source | CACACAHVHMCACRC |
| ZNF213 | ENSG00000085644 | C2H2 ZF | Known motif – High-throughput in vitro | MGAMMBCRGGCGGMG |
| ZNF214 | ENSG00000149050 | C2H2 ZF | Known motif – High-throughput in vitro | VWTMATYAANRTCCTCAAVAABD |
| ZNF215 | ENSG00000149054 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF217 | ENSG00000171940 | C2H2 ZF | Known motif – In vivo/Misc source | GKNRGAAT |
| ZNF219 | ENSG00000165804 | C2H2 ZF | Known motif – In vivo/Misc source | DGGGGGGYGGW |
| ZNF22 | ENSG00000165512 | C2H2 ZF | Known motif – High-throughput in vitro | AAAAAAAAA |
| ZNF221 | ENSG00000159905 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF222 | ENSG00000159885 | C2H2 ZF | Known motif – High-throughput in vitro | GCTGMSAYB |
| ZNF223 | ENSG00000178386 | C2H2 ZF | Known motif – In vivo/Misc source | MCACACASASM |
| ZNF224 | ENSG00000267680 | C2H2 ZF | Known motif – High-throughput in vitro | WMCYYNKGDGYHMHRKGRMTY |
| ZNF225 | ENSG00000256294 | C2H2 ZF | Known motif – In vivo/Misc source | TTAYCWKYDKNRYTTYTTTYTTTTTYYH |
| ZNF226 | ENSG00000167380 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF227 | ENSG00000131115 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF229 | ENSG00000278318 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF23 | ENSG00000167377 | C2H2 ZF | Known motif – High-throughput in vitro | DCRMCCATGGCCGCGHCM |
| ZNF230 | ENSG00000159882 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF232 | ENSG00000167840 | C2H2 ZF | Known motif – High-throughput in vitro | RTGTTAAAYGTRGATTAAS |
| ZNF233 | ENSG00000159915 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF234 | ENSG00000263002 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF235 | ENSG00000159917 | C2H2 ZF | Known motif – High-throughput in vitro | AARARADRAARRAAAWNRDDWDVDNNAWDR |
| ZNF236 | ENSG00000130856 | C2H2 ZF | Known motif – In vivo/Misc source | MGTAATATTVM |
| ZNF239 | ENSG00000196793 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF24 | ENSG00000172466 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF248 | ENSG00000198105 | C2H2 ZF | Known motif – High-throughput in vitro | RHDDACHATRTYCAKBRA |
| ZNF25 | ENSG00000175395 | C2H2 ZF | Known motif – In vivo/Misc source | WGAADWANAVARGTYGCWGCATTTAGAAA |
| ZNF250 | ENSG00000196150 | C2H2 ZF | Known motif – High-throughput in vitro | YASGCCYAY |
| ZNF251 | ENSG00000198169 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF253 | ENSG00000256771 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF254 | ENSG00000213096 | C2H2 ZF | Known motif – High-throughput in vitro | ACTGGCYTAGCCTCCCAGCCTACATCTTTCTCC |
| ZNF256 | ENSG00000152454 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF257 | ENSG00000197134 | C2H2 ZF | Known motif – High-throughput in vitro | GAGGMRA |
| ZNF26 | ENSG00000198393 | C2H2 ZF | Known motif – In vivo/Misc source | ATTTTT |
| ZNF260 | ENSG00000254004 | C2H2 ZF | Known motif – High-throughput in vitro | GGARDRVDANRVDRV |
| ZNF263 | ENSG00000006194 | C2H2 ZF | Known motif – High-throughput in vitro | GGGAGSACB |
| ZNF264 | ENSG00000083844 | C2H2 ZF | Known motif – High-throughput in vitro | KKGRGSCCYYHNBRATGGGATTAGTGCCCT |
| ZNF266 | ENSG00000174652 | C2H2 ZF | Known motif – High-throughput in vitro | VNHRCTCACAGSYCC |
| ZNF267 | ENSG00000185947 | C2H2 ZF | Known motif – High-throughput in vitro | VSYNVVGGCNKGBGVRGVDG |
| ZNF268 | ENSG00000090612 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF273 | ENSG00000198039 | C2H2 ZF | Known motif – High-throughput in vitro | GARAGGAGCTAC |
| ZNF274 | ENSG00000171606 | C2H2 ZF | Known motif – High-throughput in vitro | VYGAGRACTCAYRY |
| ZNF275 | ENSG00000063587 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF276 | ENSG00000158805 | C2H2 ZF | Known motif – High-throughput in vitro | WAAGGWSGWVDMKACNHCCTTWA |
| ZNF277 | ENSG00000198839 | C2H2 ZF; BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF28 | ENSG00000198538 | C2H2 ZF | Known motif – High-throughput in vitro | GBNKSHGGGGTGCCM |
| ZNF280A | ENSG00000169548 | C2H2 ZF | Known motif – In vivo/Misc source | TCTCWCCWGTRTGRRTTCTYTSAT |
| ZNF280B | ENSG00000275004 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF280C | ENSG00000056277 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF280D | ENSG00000137871 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF281 | ENSG00000162702 | C2H2 ZF | Known motif – High-throughput in vitro | KGGGGGAGGGGS |
| ZNF282 | ENSG00000170265 | C2H2 ZF | Known motif – High-throughput in vitro | HTCCCMYNACMCK |
| ZNF283 | ENSG00000167637 | C2H2 ZF | Known motif – High-throughput in vitro | BNGGCTGRTSBKGSYBGGSYB |
| ZNF284 | ENSG00000186026 | C2H2 ZF | Known motif – High-throughput in vitro | GCTGGAGTGCAG |
| ZNF285 | ENSG00000267508 | C2H2 ZF | Known motif – In vivo/Misc source | TNTTYTYBYTYDYTYTNHTTT |
| ZNF286A | ENSG00000187607 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF286B | ENSG00000249459 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF287 | ENSG00000141040 | C2H2 ZF | Known motif – High-throughput in vitro | AAAARAAAARRWARMARAVMWRRARRAVADR |
| ZNF292 | ENSG00000188994 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF296 | ENSG00000170684 | C2H2 ZF | Known motif – High-throughput in vitro | VVTGWCCASYV |
| ZNF3 | ENSG00000166526 | C2H2 ZF | Known motif – High-throughput in vitro | TGAHTGAMTRANWGA |
| ZNF30 | ENSG00000168661 | C2H2 ZF | Known motif – High-throughput in vitro | CGGACGGGGCGGCTG |
| ZNF300 | ENSG00000145908 | C2H2 ZF | Known motif – In vivo/Misc source | KKDGWRDDDGNRKBNDDGDDKKNRNBKRKR |
| ZNF302 | ENSG00000089335 | C2H2 ZF | Known motif – High-throughput in vitro | AGTTGAGTGACTGYDSTT |
| ZNF304 | ENSG00000131845 | C2H2 ZF | Known motif – High-throughput in vitro | VVGRSYVGRBYGGGGMVGGNV |
| ZNF311 | ENSG00000197935 | C2H2 ZF | Known motif – In vivo/Misc source | YYSCDGCBSBNBCYS |
| ZNF316 | ENSG00000205903 | C2H2 ZF | Known motif – In vivo/Misc source | KCCSCCGGACCH |
| ZNF317 | ENSG00000130803 | C2H2 ZF | Known motif – High-throughput in vitro | RACAGMWGACWD |
| ZNF318 | ENSG00000171467 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF319 | ENSG00000166188 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF32 | ENSG00000169740 | C2H2 ZF | Known motif – High-throughput in vitro | BGTAAYNYGAYACB |
| ZNF320 | ENSG00000182986 | C2H2 ZF | Known motif – High-throughput in vitro | CMYHKKCCCCYKGVHCCCMC |
| ZNF322 | ENSG00000181315 | C2H2 ZF | Known motif – High-throughput in vitro | VVGGCHSHGKASCAGDCHS |
| ZNF324 | ENSG00000083812 | C2H2 ZF | Known motif – High-throughput in vitro | GRTYRAACCATCCY |
| ZNF324B | ENSG00000249471 | C2H2 ZF | Known motif – In vivo/Misc source | HHHDGSMRGSHRAGG |
| ZNF326 | ENSG00000162664 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF329 | ENSG00000181894 | C2H2 ZF | Known motif – High-throughput in vitro | CYKGAKCMVVCYNNDCCTGMA |
| ZNF331 | ENSG00000130844 | C2H2 ZF | Known motif – High-throughput in vitro | VVAVSSNNMYWGCWGAGCMCWKYCH |
| ZNF333 | ENSG00000160961 | C2H2 ZF | Known motif – High-throughput in vitro | STGGAKSM |
| ZNF334 | ENSG00000198185 | C2H2 ZF | Known motif – In vivo/Misc source | YCCGKSMGGGAGGTGRGG |
| ZNF335 | ENSG00000198026 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF337 | ENSG00000130684 | C2H2 ZF | Known motif – High-throughput in vitro | AGTRGTGAYRAATTC |
| ZNF33A | ENSG00000189180 | C2H2 ZF | Known motif – High-throughput in vitro | TCAGTGCAC |
| ZNF33B | ENSG00000196693 | C2H2 ZF | Known motif – High-throughput in vitro | ATTMAATHCCHTYYNHTDVMW |
| ZNF34 | ENSG00000196378 | C2H2 ZF | Known motif – In vivo/Misc source | DRARGAVAAGYCTGD |
| ZNF341 | ENSG00000131061 | C2H2 ZF | Known motif – In vivo/Misc source | VVVRRVRRNDVVNGGARSAGC |
| ZNF343 | ENSG00000088876 | C2H2 ZF | Known motif – High-throughput in vitro | KRCCGHGGKGAAGCGB |
| ZNF345 | ENSG00000251247 | C2H2 ZF | Known motif – High-throughput in vitro | TTGCAACVYVNRCAACYGKAC |
| ZNF346 | ENSG00000113761 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF347 | ENSG00000197937 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF35 | ENSG00000169981 | C2H2 ZF | Known motif – High-throughput in vitro | ATATRTAAAGAGYTYYTABAA |
| ZNF350 | ENSG00000256683 | C2H2 ZF | Known motif – High-throughput in vitro | DNBDVRKHAWAAAARRRCH |
| ZNF354A | ENSG00000169131 | C2H2 ZF | Known motif – High-throughput in vitro | RTAAATGGHYTAAAY |
| ZNF354B | ENSG00000178338 | C2H2 ZF | Known motif – High-throughput in vitro | AAKGRRMTAWHY |
| ZNF354C | ENSG00000177932 | C2H2 ZF | Known motif – In vivo/Misc source | VTCCAC |
| ZNF358 | ENSG00000198816 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF362 | ENSG00000160094 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF365 | ENSG00000138311 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF366 | ENSG00000178175 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF367 | ENSG00000165244 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF37A | ENSG00000075407 | C2H2 ZF | Known motif – High-throughput in vitro | GGARRRRRV |
| ZNF382 | ENSG00000161298 | C2H2 ZF | Known motif – High-throughput in vitro | GWGVMANYASTACAGRYMHHRBDS |
| ZNF383 | ENSG00000188283 | C2H2 ZF | Known motif – High-throughput in vitro | GAGSVRVRASRKGGMAGGRRBCNGGGY |
| ZNF384 | ENSG00000126746 | C2H2 ZF | Known motif – High-throughput in vitro | TTTTBNNNNNNNNNNNNVAAAA |
| ZNF385A | ENSG00000161642 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF385B | ENSG00000144331 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF385C | ENSG00000187595 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF385D | ENSG00000151789 | C2H2 ZF | Known motif – High-throughput in vitro | HHGTCGCGACRD |
| ZNF391 | ENSG00000124613 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF394 | ENSG00000160908 | C2H2 ZF | Known motif – In vivo/Misc source | VVRGGAGNAGCWGNRVVDNV |
| ZNF395 | ENSG00000186918 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF396 | ENSG00000186496 | C2H2 ZF | Known motif – High-throughput in vitro | VTTTCGKACAB |
| ZNF397 | ENSG00000186812 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF398 | ENSG00000197024 | C2H2 ZF | Known motif – In vivo/Misc source | DGGGARRGARRSAG |
| ZNF404 | ENSG00000176222 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF407 | ENSG00000215421 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF408 | ENSG00000175213 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF41 | ENSG00000147124 | C2H2 ZF | Known motif – High-throughput in vitro | RMARGGRARNNNRRSACMATGAGNVAV |
| ZNF410 | ENSG00000119725 | C2H2 ZF | Known motif – High-throughput in vitro | MCATCCCATAATANBM |
| ZNF414 | ENSG00000133250 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF415 | ENSG00000170954 | C2H2 ZF | Known motif – In vivo/Misc source | VTRCVCVMTKARBATC |
| ZNF416 | ENSG00000083817 | C2H2 ZF | Known motif – In vivo/Misc source | TRGCCCAGTCAAGTTGAC |
| ZNF417 | ENSG00000173480 | C2H2 ZF | Known motif – High-throughput in vitro | HNGGCGCCAVNTG |
| ZNF418 | ENSG00000196724 | C2H2 ZF | Known motif – High-throughput in vitro | VDGWRGCYAAAAGCA |
| ZNF419 | ENSG00000105136 | C2H2 ZF | Known motif – High-throughput in vitro | DGGARAGKMHAGGRCTGBADW |
| ZNF420 | ENSG00000197050 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF423 | ENSG00000102935 | C2H2 ZF | Known motif – In vivo/Misc source | GRCACCCWAGGGTGC |
| ZNF425 | ENSG00000204947 | C2H2 ZF | Known motif – In vivo/Misc source | GGBACA |
| ZNF426 | ENSG00000130818 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF428 | ENSG00000131116 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF429 | ENSG00000197013 | C2H2 ZF | Known motif – High-throughput in vitro | DGGMRKAGSHVNMAATGGGYH |
| ZNF43 | ENSG00000198521 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF430 | ENSG00000118620 | C2H2 ZF | Known motif – High-throughput in vitro | MCADGGHRGMNDGCHR |
| ZNF431 | ENSG00000196705 | C2H2 ZF | Known motif – In vivo/Misc source | VRGGCTRGMWGNYNV |
| ZNF432 | ENSG00000256087 | C2H2 ZF | Known motif – In vivo/Misc source | GTYRAAAACAAT |
| ZNF433 | ENSG00000197647 | C2H2 ZF | Known motif – High-throughput in vitro | RDGACYRHWGTRRTAAYY |
| ZNF436 | ENSG00000125945 | C2H2 ZF | Known motif – High-throughput in vitro | TCCTCCAGGAAGCCY |
| ZNF438 | ENSG00000183621 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF439 | ENSG00000171291 | C2H2 ZF | Known motif – In vivo/Misc source | CARTCACCYYCHGGV |
| ZNF44 | ENSG00000197857 | C2H2 ZF | Known motif – High-throughput in vitro | VBGNTVYKGCHGYDVNG |
| ZNF440 | ENSG00000171295 | C2H2 ZF | Known motif – High-throughput in vitro | RRTKGTTCTGCW |
| ZNF441 | ENSG00000197044 | C2H2 ZF | Known motif – High-throughput in vitro | SRGRCGGAGYB |
| ZNF442 | ENSG00000198342 | C2H2 ZF | Known motif – In vivo/Misc source | SHWDWTWTTTNHHTTTTT |
| ZNF443 | ENSG00000180855 | C2H2 ZF | Known motif – High-throughput in vitro | GYCTBCYMAGWHGCKGGBRTT |
| ZNF444 | ENSG00000167685 | C2H2 ZF | Known motif – High-throughput in vitro | DGGGGGAGGGGGAYG |
| ZNF445 | ENSG00000185219 | C2H2 ZF | Known motif – In vivo/Misc source | AAMTYCYYGASNRNMMAGGRKTMYYYCHC |
| ZNF446 | ENSG00000083838 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF449 | ENSG00000173275 | C2H2 ZF | Known motif – High-throughput in vitro | RCGCCCAACC |
| ZNF45 | ENSG00000124459 | C2H2 ZF | Known motif – High-throughput in vitro | AGGAANAYA |
| ZNF451 | ENSG00000112200 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF454 | ENSG00000178187 | C2H2 ZF | Known motif – High-throughput in vitro | WRGCGCCWGGCGCYW |
| ZNF460 | ENSG00000197714 | C2H2 ZF | Known motif – High-throughput in vitro | CAACGCCCCCCG |
| ZNF461 | ENSG00000197808 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF462 | ENSG00000148143 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF467 | ENSG00000181444 | C2H2 ZF | Known motif – High-throughput in vitro | GGDGGGGGAGGG |
| ZNF468 | ENSG00000204604 | C2H2 ZF | Known motif – High-throughput in vitro | DGGGAGGGGGYGSNS |
| ZNF469 | ENSG00000225614 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF470 | ENSG00000197016 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF471 | ENSG00000196263 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF473 | ENSG00000142528 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF474 | ENSG00000164185 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF479 | ENSG00000185177 | C2H2 ZF | Known motif – High-throughput in vitro | GADGACYYKGRGGRY |
| ZNF48 | ENSG00000180035 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF480 | ENSG00000198464 | C2H2 ZF | Known motif – High-throughput in vitro | DRDGAAKGDGDD |
| ZNF483 | ENSG00000173258 | C2H2 ZF | Known motif – High-throughput in vitro | DSAGRGAGCTGCA |
| ZNF484 | ENSG00000127081 | C2H2 ZF | Known motif – High-throughput in vitro | VRDGGAVWGVRGMASWDGVNV |
| ZNF485 | ENSG00000198298 | C2H2 ZF | Known motif – High-throughput in vitro | AYTTSSWWTKKSRMYRTRKGS |
| ZNF486 | ENSG00000256229 | C2H2 ZF | Known motif – In vivo/Misc source | VVBBBNSNGCSGAMDCCCGGV |
| ZNF487 | ENSG00000243660 | C2H2 ZF | Known motif – In vivo/Misc source | VVBBBNSNGCSGAMDCCCGGV |
| ZNF488 | ENSG00000265763 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF490 | ENSG00000188033 | C2H2 ZF | Known motif – In vivo/Misc source | HDGNMRGCAGCANAY |
| ZNF491 | ENSG00000177599 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF492 | ENSG00000229676 | C2H2 ZF | Known motif – High-throughput in vitro | MNAARARMAMBAAAARGG |
| ZNF493 | ENSG00000196268 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF496 | ENSG00000162714 | C2H2 ZF | Known motif – In vivo/Misc source | BCNSBCYCYBHMYYHSHBYCY |
| ZNF497 | ENSG00000174586 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF500 | ENSG00000103199 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF501 | ENSG00000186446 | C2H2 ZF | Known motif – High-throughput in vitro | GCGACGCGAMCV |
| ZNF502 | ENSG00000196653 | C2H2 ZF | Known motif – High-throughput in vitro | GGACYDBTGCAGTAGYHH |
| ZNF503 | ENSG00000165655 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF506 | ENSG00000081665 | C2H2 ZF | Known motif – High-throughput in vitro | YTGGGGGCTCVBMC |
| ZNF507 | ENSG00000168813 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF510 | ENSG00000081386 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF511 | ENSG00000198546 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF512 | ENSG00000243943 | C2H2 ZF; BED ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF512B | ENSG00000196700 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF513 | ENSG00000163795 | C2H2 ZF | Known motif – High-throughput in vitro | GATGRTGATGATGRT |
| ZNF514 | ENSG00000144026 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF516 | ENSG00000101493 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF517 | ENSG00000197363 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF518A | ENSG00000177853 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF518B | ENSG00000178163 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF519 | ENSG00000175322 | C2H2 ZF | Known motif – High-throughput in vitro | GGGCGGCKGCRGCBGCGS |
| ZNF521 | ENSG00000198795 | C2H2 ZF | Known motif – In vivo/Misc source | TGGGGGMCCCCW |
| ZNF524 | ENSG00000171443 | C2H2 ZF; AT hook | Known motif – High-throughput in vitro | YTCGVACCC |
| ZNF525 | ENSG00000203326 | C2H2 ZF | Known motif – High-throughput in vitro | RTTMCTWATDMAGNT |
| ZNF526 | ENSG00000167625 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF527 | ENSG00000189164 | C2H2 ZF | Known motif – In vivo/Misc source | DGRKNGBMDGHRACAGMRR |
| ZNF528 | ENSG00000167555 | C2H2 ZF | Known motif – High-throughput in vitro | GGAAGYCATTTC |
| ZNF529 | ENSG00000186020 | C2H2 ZF | Known motif – In vivo/Misc source | CYCYBYCTBCYHDSM |
| ZNF530 | ENSG00000183647 | C2H2 ZF | Known motif – High-throughput in vitro | GMADGGMNAGGGSCNGVV |
| ZNF532 | ENSG00000074657 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF534 | ENSG00000198633 | C2H2 ZF | Known motif – High-throughput in vitro | GVGGGGMRAGARBNBVV |
| ZNF536 | ENSG00000198597 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF540 | ENSG00000171817 | C2H2 ZF | Known motif – In vivo/Misc source | RGRGGVAGGVA |
| ZNF541 | ENSG00000118156 | C2H2 ZF; Myb/SANT | Known motif – In vivo/Misc source | CCCATGCGCGGG |
| ZNF543 | ENSG00000178229 | C2H2 ZF | Known motif – High-throughput in vitro | SSVCWGGVCMGS |
| ZNF544 | ENSG00000198131 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF546 | ENSG00000187187 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF547 | ENSG00000152433 | C2H2 ZF | Known motif – High-throughput in vitro | GCWAAYKCWGCARGC |
| ZNF548 | ENSG00000188785 | C2H2 ZF | Known motif – High-throughput in vitro | GBBGCKGCDGSVSSVSVG |
| ZNF549 | ENSG00000121406 | C2H2 ZF | Known motif – High-throughput in vitro | ATGAAYYGGGCAGCM |
| ZNF550 | ENSG00000251369 | C2H2 ZF | Known motif – High-throughput in vitro | DNVRRDGCWRRGGYAGRG |
| ZNF551 | ENSG00000204519 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF552 | ENSG00000178935 | C2H2 ZF | Known motif – High-throughput in vitro | CCACGAGGGGH |
| ZNF554 | ENSG00000172006 | C2H2 ZF | Known motif – High-throughput in vitro | CHGRGYCANNYRGDKDRCH |
| ZNF555 | ENSG00000186300 | C2H2 ZF | Known motif – In vivo/Misc source | AAAAAGCCGCGGCGG |
| ZNF556 | ENSG00000172000 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF557 | ENSG00000130544 | C2H2 ZF | Known motif – In vivo/Misc source | MAGARTGYT |
| ZNF558 | ENSG00000167785 | C2H2 ZF | Known motif – High-throughput in vitro | HKGRAYHTGTRGRTKBATRYCTTYCAK |
| ZNF559 | ENSG00000188321 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF560 | ENSG00000198028 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF561 | ENSG00000171469 | C2H2 ZF | Known motif – In vivo/Misc source | DSNGCMGAAARGSBBYBBBCC |
| ZNF562 | ENSG00000171466 | C2H2 ZF | Known motif – In vivo/Misc source | DDYYCAGCAAGGCAMWWT |
| ZNF563 | ENSG00000188868 | C2H2 ZF | Known motif – High-throughput in vitro | BTCMBNNSHRGCMRCHGY |
| ZNF564 | ENSG00000249709 | C2H2 ZF | Known motif – High-throughput in vitro | GGGAAGTCCAAG |
| ZNF565 | ENSG00000196357 | C2H2 ZF | Known motif – High-throughput in vitro | ATGYTGTGAGGAAGCYCA |
| ZNF566 | ENSG00000186017 | C2H2 ZF | Known motif – High-throughput in vitro | VNDGCKGVAARGGARSC |
| ZNF567 | ENSG00000189042 | C2H2 ZF | Known motif – High-throughput in vitro | VHAVAARHAGAMMHHNARRTG |
| ZNF568 | ENSG00000198453 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF569 | ENSG00000196437 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF57 | ENSG00000171970 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF570 | ENSG00000171827 | C2H2 ZF | Known motif – High-throughput in vitro | ARAHAWMWHNMAAGAAAA |
| ZNF571 | ENSG00000180479 | C2H2 ZF | Known motif – High-throughput in vitro | SSGMGGCBGMGGCRG |
| ZNF572 | ENSG00000180938 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF573 | ENSG00000189144 | C2H2 ZF | Known motif – High-throughput in vitro | MAGHMMDGGCMCAMNMADB |
| ZNF574 | ENSG00000105732 | C2H2 ZF | Known motif – High-throughput in vitro | CTAGAGMGKCSS |
| ZNF575 | ENSG00000176472 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF576 | ENSG00000124444 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF577 | ENSG00000161551 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF578 | ENSG00000258405 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF579 | ENSG00000218891 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF580 | ENSG00000213015 | C2H2 ZF | Known motif – High-throughput in vitro | VCTACCNYHNNVCTACCNH |
| ZNF581 | ENSG00000171425 | C2H2 ZF | Known motif – In vivo/Misc source | CTTCTAVAAGV |
| ZNF582 | ENSG00000018869 | C2H2 ZF | Known motif – High-throughput in vitro | KYMSYTGCMGCCNARNGCAYBCYH |
| ZNF583 | ENSG00000198440 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF584 | ENSG00000171574 | C2H2 ZF | Known motif – High-throughput in vitro | DNTTTMARAAHTGYTWTGGDH |
| ZNF585A | ENSG00000196967 | C2H2 ZF | Known motif – High-throughput in vitro | TCYGTWYTY |
| ZNF585B | ENSG00000245680 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF586 | ENSG00000083828 | C2H2 ZF | Known motif – High-throughput in vitro | CAGGCCYRGAGG |
| ZNF587 | ENSG00000198466 | C2H2 ZF | Known motif – High-throughput in vitro | MCMRYGTTGGGCGCHANNHD |
| ZNF587B | ENSG00000269343 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF589 | ENSG00000164048 | C2H2 ZF | Known motif – In vivo/Misc source | VSRBDRWWVCCBYKK |
| ZNF592 | ENSG00000166716 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF594 | ENSG00000180626 | C2H2 ZF | Known motif – High-throughput in vitro | RDDSDGAGAGCNSS |
| ZNF595 | ENSG00000272602 | C2H2 ZF | Known motif – High-throughput in vitro | GGGAGGGMWKC |
| ZNF596 | ENSG00000172748 | C2H2 ZF | Known motif – High-throughput in vitro | VGVRRGAGVSMGAGM |
| ZNF597 | ENSG00000167981 | C2H2 ZF | Known motif – High-throughput in vitro | CAARATGGCGKM |
| ZNF598 | ENSG00000167962 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF599 | ENSG00000153896 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF600 | ENSG00000189190 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF605 | ENSG00000196458 | C2H2 ZF | Known motif – High-throughput in vitro | DGGKNNDDAGRVVCCMNRVD |
| ZNF606 | ENSG00000166704 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF607 | ENSG00000198182 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF608 | ENSG00000168916 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF609 | ENSG00000180357 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF610 | ENSG00000167554 | C2H2 ZF | Known motif – High-throughput in vitro | GGAGCGGC |
| ZNF611 | ENSG00000213020 | C2H2 ZF | Known motif – High-throughput in vitro | GGAGMGCCBVNGVVBVSCBSB |
| ZNF613 | ENSG00000176024 | C2H2 ZF | Known motif – High-throughput in vitro | WAAAAAAAB |
| ZNF614 | ENSG00000142556 | C2H2 ZF | Known motif – In vivo/Misc source | BDCTTKAKCTMATKD |
| ZNF615 | ENSG00000197619 | C2H2 ZF | Known motif – High-throughput in vitro | AAABDVCTGYBSCCC |
| ZNF616 | ENSG00000204611 | C2H2 ZF | Known motif – High-throughput in vitro | RHRGGTGAGCRY |
| ZNF618 | ENSG00000157657 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF619 | ENSG00000177873 | C2H2 ZF | Known motif – In vivo/Misc source | BYNNBCCCCNNCCYCAGGAAT |
| ZNF620 | ENSG00000177842 | C2H2 ZF | Known motif – In vivo/Misc source | WKTSYAKTY |
| ZNF621 | ENSG00000172888 | C2H2 ZF | Known motif – In vivo/Misc source | RRRVKCYCAGGGMAG |
| ZNF623 | ENSG00000183309 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF624 | ENSG00000197566 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF625 | ENSG00000257591 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF626 | ENSG00000188171 | C2H2 ZF | Known motif – High-throughput in vitro | HDVRTNNKGYTVHKVTGBYCCYTSYH |
| ZNF627 | ENSG00000198551 | C2H2 ZF | Known motif – High-throughput in vitro | TTTAAGCCCACTGTTGAG |
| ZNF628 | ENSG00000197483 | C2H2 ZF | Known motif – In vivo/Misc source | GCAACCAACCTTG |
| ZNF629 | ENSG00000102870 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF630 | ENSG00000221994 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF639 | ENSG00000121864 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF641 | ENSG00000167528 | C2H2 ZF | Known motif – High-throughput in vitro | TGGGGGGGT |
| ZNF644 | ENSG00000122482 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF645 | ENSG00000175809 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF646 | ENSG00000167395 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF648 | ENSG00000179930 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF649 | ENSG00000198093 | C2H2 ZF | Known motif – High-throughput in vitro | ATATAA |
| ZNF652 | ENSG00000198740 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | |
| ZNF653 | ENSG00000161914 | C2H2 ZF; AT hook | Known motif – In vivo/Misc source | WTTHNYDHCYKCCGACWNHWAWD |
| ZNF654 | ENSG00000175105 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF655 | ENSG00000197343 | C2H2 ZF | Known motif – High-throughput in vitro | RVTAH |
| ZNF658 | ENSG00000274349 | C2H2 ZF | Known motif – In vivo/Misc source | GGGGTRGGACGAGGTGGG |
| ZNF66 | ENSG00000160229 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF660 | ENSG00000144792 | C2H2 ZF | Known motif – High-throughput in vitro | DYAGGDTGGRBHATCADB |
| ZNF662 | ENSG00000182983 | C2H2 ZF | Known motif – High-throughput in vitro | DRNAGSMVVGKGMYAGMB |
| ZNF664 | ENSG00000179195 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | GTTBAAWMCGC |
| ZNF665 | ENSG00000197497 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF667 | ENSG00000198046 | C2H2 ZF | Known motif – High-throughput in vitro | GCYTTAARAGCTCANCH |
| ZNF668 | ENSG00000167394 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF669 | ENSG00000188295 | C2H2 ZF | Known motif – High-throughput in vitro | VNHHRSANYGGTCRTCRNCCH |
| ZNF670 | ENSG00000277462 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF671 | ENSG00000083814 | C2H2 ZF | Known motif – High-throughput in vitro | GAKTGGADBRV |
| ZNF672 | ENSG00000171161 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF674 | ENSG00000251192 | C2H2 ZF | Known motif – High-throughput in vitro | GGRBCVCCRVV |
| ZNF675 | ENSG00000197372 | C2H2 ZF | Known motif – High-throughput in vitro | RKGVNHNRGRGGMYAAAAYGD |
| ZNF676 | ENSG00000196109 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF677 | ENSG00000197928 | C2H2 ZF | Known motif – High-throughput in vitro | GRAMMCHRAHAAGAWCAGHH |
| ZNF678 | ENSG00000181450 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF679 | ENSG00000197123 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | DGGCAGCAGM |
| ZNF680 | ENSG00000173041 | C2H2 ZF | Known motif – High-throughput in vitro | HNNNNDGNCMAAGAAGAHTNW |
| ZNF681 | ENSG00000196172 | C2H2 ZF | Known motif – High-throughput in vitro | VAAGGABGVNGR |
| ZNF682 | ENSG00000197124 | C2H2 ZF | Known motif – High-throughput in vitro | DDHYMAGCCC |
| ZNF683 | ENSG00000176083 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF684 | ENSG00000117010 | C2H2 ZF | Known motif – High-throughput in vitro | BACAGTCCACCCCTTDV |
| ZNF687 | ENSG00000143373 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF688 | ENSG00000229809 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF689 | ENSG00000156853 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF69 | ENSG00000198429 | C2H2 ZF | Known motif – In vivo/Misc source | GGRGSHGGGGBDGGV |
| ZNF691 | ENSG00000164011 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | RKGAGYAC |
| ZNF692 | ENSG00000171163 | C2H2 ZF | Known motif – In vivo/Misc source | SBGGGVCCCACH |
| ZNF695 | ENSG00000197472 | C2H2 ZF | Known motif – In vivo/Misc source | ACCAMMHMC |
| ZNF696 | ENSG00000185730 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF697 | ENSG00000143067 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | KKKGCGAGGGM |
| ZNF699 | ENSG00000196110 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF7 | ENSG00000147789 | C2H2 ZF | Known motif – High-throughput in vitro | VWRRMADYWNYAARWGBWGRC |
| ZNF70 | ENSG00000187792 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF700 | ENSG00000196757 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF701 | ENSG00000167562 | C2H2 ZF | Known motif – High-throughput in vitro | GAGMASYHDRGG |
| ZNF703 | ENSG00000183779 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF704 | ENSG00000164684 | C2H2 ZF | Known motif – High-throughput in vitro | HRCCGGCCGGYD |
| ZNF705A | ENSG00000196946 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | CCAAAARAAYY |
| ZNF705B | ENSG00000215356 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | CCAAAARAAYY |
| ZNF705D | ENSG00000215343 | C2H2 ZF | Inferred motif from similar protein – In vivo/Misc source | CCAAAARAAYY |
| ZNF705E | ENSG00000214534 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF705G | ENSG00000215372 | C2H2 ZF | Known motif – In vivo/Misc source | RAKAAACCTCY |
| ZNF706 | ENSG00000120963 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF707 | ENSG00000181135 | C2H2 ZF | Known motif – High-throughput in vitro | DACMAGGAGTGGGGTK |
| ZNF708 | ENSG00000182141 | C2H2 ZF | Known motif – High-throughput in vitro | RDDAGGYACAGCH |
| ZNF709 | ENSG00000242852 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF71 | ENSG00000197951 | C2H2 ZF | Known motif – High-throughput in vitro | BRGNRGSMRRRGVRARRARRGMAA |
| ZNF710 | ENSG00000140548 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF711 | ENSG00000147180 | C2H2 ZF | Known motif – In vivo/Misc source | MGGCCTVS |
| ZNF713 | ENSG00000178665 | C2H2 ZF | Known motif – High-throughput in vitro | WAGAMRAAWGCCACGAA |
| ZNF714 | ENSG00000160352 | C2H2 ZF | Known motif – High-throughput in vitro | DKMRKTSCTGCT |
| ZNF716 | ENSG00000182111 | C2H2 ZF | Known motif – High-throughput in vitro | VTATTTCY |
| ZNF717 | ENSG00000227124 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF718 | ENSG00000250312 | C2H2 ZF | Known motif – In vivo/Misc source | GGGRATWGCGM |
| ZNF721 | ENSG00000182903 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF724 | ENSG00000196081 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF726 | ENSG00000213967 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF727 | ENSG00000214652 | C2H2 ZF | Known motif – In vivo/Misc source | GGTCCAAWTGM |
| ZNF728 | ENSG00000269067 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF729 | ENSG00000196350 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF730 | ENSG00000183850 | C2H2 ZF | Known motif – High-throughput in vitro | GGGMRGSBRNGG |
| ZNF732 | ENSG00000186777 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF735 | ENSG00000223614 | C2H2 ZF | Known motif – In vivo/Misc source | DGGCAGCAGM |
| ZNF736 | ENSG00000234444 | C2H2 ZF | Known motif – High-throughput in vitro | YCYRGGGYTTTT |
| ZNF737 | ENSG00000237440 | C2H2 ZF | Known motif – In vivo/Misc source | RKRVDGRDGVWGGDG |
| ZNF74 | ENSG00000185252 | C2H2 ZF | Known motif – In vivo/Misc source | RAAGATGTTCHYYDCVKYRTTRTTTAHVW |
| ZNF740 | ENSG00000139651 | C2H2 ZF | Known motif – High-throughput in vitro | YNCCCCCCCCAC |
| ZNF746 | ENSG00000181220 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF747 | ENSG00000169955 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF749 | ENSG00000186230 | C2H2 ZF | Known motif – High-throughput in vitro | GYTGGGGYT |
| ZNF750 | ENSG00000141579 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF75A | ENSG00000162086 | C2H2 ZF | Known motif – High-throughput in vitro | TGTGGGAAAASM |
| ZNF75D | ENSG00000186376 | C2H2 ZF | Known motif – High-throughput in vitro | GTGGGAAAKCCTTYH |
| ZNF76 | ENSG00000065029 | C2H2 ZF | Known motif – High-throughput in vitro | HWCCCABAATGCAHYRCR |
| ZNF761 | ENSG00000160336 | C2H2 ZF | Known motif – In vivo/Misc source | KGDWAATCAKA |
| ZNF763 | ENSG00000197054 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF764 | ENSG00000169951 | C2H2 ZF | Known motif – In vivo/Misc source | TGCARCCYAGCTCTAYDAGMC |
| ZNF765 | ENSG00000196417 | C2H2 ZF | Known motif – High-throughput in vitro | CTBGGCHVNGCMCWGVS |
| ZNF766 | ENSG00000196214 | C2H2 ZF | Known motif – In vivo/Misc source | RAKAAACCYYH |
| ZNF768 | ENSG00000169957 | C2H2 ZF | Known motif – High-throughput in vitro | CHCAGAGAGGKYRAG |
| ZNF77 | ENSG00000175691 | C2H2 ZF | Known motif – In vivo/Misc source | TYMYCACTYCACYHNNNHMAD |
| ZNF770 | ENSG00000198146 | C2H2 ZF | Known motif – In vivo/Misc source | GGAGGCYGVVV |
| ZNF771 | ENSG00000179965 | C2H2 ZF | Known motif – High-throughput in vitro | RCGCTAACCAYTD |
| ZNF772 | ENSG00000197128 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF773 | ENSG00000152439 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF774 | ENSG00000196391 | C2H2 ZF | Known motif – High-throughput in vitro | DGRRRVRGAGVHDGRRD |
| ZNF775 | ENSG00000196456 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF776 | ENSG00000152443 | C2H2 ZF | Known motif – High-throughput in vitro | GAAGCAHRRYGCYGGCATCTG |
| ZNF777 | ENSG00000196453 | C2H2 ZF | Known motif – In vivo/Misc source | GHCCSYCCCGTCSARCAAW |
| ZNF778 | ENSG00000170100 | C2H2 ZF | Known motif – High-throughput in vitro | CAGACRMCRRCH |
| ZNF780A | ENSG00000197782 | C2H2 ZF | Known motif – High-throughput in vitro | VNNNNDNNHDGGCAGGYNBNYDDV |
| ZNF780B | ENSG00000128000 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF781 | ENSG00000196381 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF782 | ENSG00000196597 | C2H2 ZF | Known motif – In vivo/Misc source | HARRHCCWACAHVDRGRSHNYCTCAVRVVY |
| ZNF783 | ENSG00000204946 | C2H2 ZF | Known motif – In vivo/Misc source | SBTSCWSCDSCDSYDSCWGCT |
| ZNF784 | ENSG00000179922 | C2H2 ZF | Known motif – High-throughput in vitro | ACYTWCCK |
| ZNF785 | ENSG00000197162 | C2H2 ZF | Known motif – In vivo/Misc source | ACWBRBRCAYACASWYVMMCVMACACASA |
| ZNF786 | ENSG00000197362 | C2H2 ZF | Known motif – In vivo/Misc source | CRGRGNCCCRRRGRC |
| ZNF787 | ENSG00000142409 | C2H2 ZF | Known motif – High-throughput in vitro | BGAGGCANNNNNNNTGCATY |
| ZNF788 | ENSG00000214189 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF789 | ENSG00000198556 | C2H2 ZF | Known motif – High-throughput in vitro | CYYSTGACACCH |
| ZNF79 | ENSG00000196152 | C2H2 ZF | Known motif – High-throughput in vitro | AAAVRAAWDAATNTCTAA |
| ZNF790 | ENSG00000197863 | C2H2 ZF | Known motif – High-throughput in vitro | GTGCAGCA |
| ZNF791 | ENSG00000173875 | C2H2 ZF | Known motif – In vivo/Misc source | CKCTGACCCCDCCTCCYBTCTAAA |
| ZNF792 | ENSG00000180884 | C2H2 ZF | Known motif – In vivo/Misc source | DRCTGDTKWNHDBAGATAGKR |
| ZNF793 | ENSG00000188227 | C2H2 ZF | Known motif – High-throughput in vitro | GARCCCCAAGVV |
| ZNF799 | ENSG00000196466 | C2H2 ZF | Known motif – High-throughput in vitro | AYMCYBGYTGTCTCAGTGWTTKGS |
| ZNF8 | ENSG00000278129 | C2H2 ZF | Known motif – High-throughput in vitro | DHNDDGRCRTACCRBV |
| ZNF80 | ENSG00000174255 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF800 | ENSG00000048405 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF804A | ENSG00000170396 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF804B | ENSG00000182348 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF805 | ENSG00000204524 | C2H2 ZF | Known motif – High-throughput in vitro | MYKSCATTCCWTKSCWTKYSR |
| ZNF808 | ENSG00000198482 | C2H2 ZF | Known motif – High-throughput in vitro | GGNWGGWCTVYAAAVNVSHYKBTHNDKND |
| ZNF81 | ENSG00000197779 | C2H2 ZF | Known motif – High-throughput in vitro | TGGTVNHACYABYNNRRA |
| ZNF813 | ENSG00000198346 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF814 | ENSG00000204514 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF816 | ENSG00000180257 | C2H2 ZF | Known motif – High-throughput in vitro | VVNNRDGGGGACMKGHND |
| ZNF821 | ENSG00000102984 | C2H2 ZF | Known motif – High-throughput in vitro | HRGACAGACVGACR |
| ZNF823 | ENSG00000197933 | C2H2 ZF | Known motif – High-throughput in vitro | HHYTTCTCYNYYBCY |
| ZNF827 | ENSG00000151612 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF829 | ENSG00000185869 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF83 | ENSG00000167766 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF830 | ENSG00000198783 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF831 | ENSG00000124203 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF835 | ENSG00000127903 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF836 | ENSG00000196267 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF837 | ENSG00000152475 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF84 | ENSG00000198040 | C2H2 ZF | Known motif – High-throughput in vitro | RVRRVNNVNRDGAACAGGMAR |
| ZNF841 | ENSG00000197608 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF843 | ENSG00000176723 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF844 | ENSG00000223547 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF845 | ENSG00000213799 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF846 | ENSG00000196605 | C2H2 ZF | Known motif – In vivo/Misc source | GVGSMVGGGMSVSVG |
| ZNF85 | ENSG00000105750 | C2H2 ZF | Known motif – High-throughput in vitro | BRGATTMCWKCA |
| ZNF850 | ENSG00000267041 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF852 | ENSG00000178917 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | VYAHACTKTNRAGYGV |
| ZNF853 | ENSG00000236609 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF860 | ENSG00000197385 | C2H2 ZF | Known motif – High-throughput in vitro | VRCAGGGAGCVRVVS |
| ZNF865 | ENSG00000261221 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF878 | ENSG00000257446 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF879 | ENSG00000234284 | C2H2 ZF | Known motif – High-throughput in vitro | AHARHAMWAHWRAAMMWANWWRVH |
| ZNF880 | ENSG00000221923 | C2H2 ZF | Known motif – High-throughput in vitro | DDNDDVDNGGGRRDGGGARAGDGMAR |
| ZNF883 | ENSG00000228623 | C2H2 ZF | Known motif – In vivo/Misc source | GAGGCAGCCACH |
| ZNF888 | ENSG00000213793 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF891 | ENSG00000214029 | C2H2 ZF | Known motif – High-throughput in vitro | BNNNNSNGRCWKCYAGCC |
| ZNF90 | ENSG00000213988 | C2H2 ZF | Known motif – High-throughput in vitro | TGGGTGDRTMAKCAG |
| ZNF91 | ENSG00000167232 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF92 | ENSG00000146757 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZNF93 | ENSG00000184635 | C2H2 ZF | Known motif – High-throughput in vitro | BNNNBNHNGCWGCHRBSNYWGCTRCYDYC |
| ZNF98 | ENSG00000197360 | C2H2 ZF | Known motif – High-throughput in vitro | VNADRKMCAANAAAAAGGHM |
| ZNF99 | ENSG00000213973 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN1 | ENSG00000152467 | C2H2 ZF | Known motif – High-throughput in vitro | HRCACACVCTGHMAVH |
| ZSCAN10 | ENSG00000130182 | C2H2 ZF | Inferred motif from similar protein – High-throughput in vitro | GDRAGTGC |
| ZSCAN12 | ENSG00000158691 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN16 | ENSG00000196812 | C2H2 ZF | Known motif – High-throughput in vitro | GAGGCTCTGTTAACANY |
| ZSCAN18 | ENSG00000121413 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN2 | ENSG00000176371 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN20 | ENSG00000121903 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN21 | ENSG00000166529 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN22 | ENSG00000182318 | C2H2 ZF | Known motif – High-throughput in vitro | GNCHGABGGMGGAGGCNV |
| ZSCAN23 | ENSG00000187987 | C2H2 ZF | Known motif – High-throughput in vitro | BTGTAATTAGCACATGR |
| ZSCAN25 | ENSG00000197037 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN26 | ENSG00000197062 | C2H2 ZF | Known motif – In vivo/Misc source | TGGGGGGCATM |
| ZSCAN29 | ENSG00000140265 | C2H2 ZF | Known motif – High-throughput in vitro | MCGYRTARMCGKCTAYRC |
| ZSCAN30 | ENSG00000186814 | C2H2 ZF | Known motif – High-throughput in vitro | BCCWGSRGCCHBSVS |
| ZSCAN31 | ENSG00000235109 | C2H2 ZF | Known motif – High-throughput in vitro | GHHGCAGGGCARTTATGC |
| ZSCAN32 | ENSG00000140987 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN4 | ENSG00000180532 | C2H2 ZF | Known motif – High-throughput in vitro | HGCACACVCTGNMA |
| ZSCAN5A | ENSG00000131848 | C2H2 ZF | Known motif – High-throughput in vitro | HKTCCCYVCVCAAADM |
| ZSCAN5B | ENSG00000197213 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZSCAN5C | ENSG00000204532 | C2H2 ZF | Known motif – High-throughput in vitro | GTGAGTNHAYRRRNV |
| ZSCAN9 | ENSG00000137185 | C2H2 ZF | Known motif – High-throughput in vitro | DRKGATAAGATAAGAABCM |
| ZUFSP | ENSG00000153975 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZXDA | ENSG00000198205 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZXDB | ENSG00000198455 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZXDC | ENSG00000070476 | C2H2 ZF | Likely sequence specific TF according to literature or domain structure – No motif | |
| ZZZ3 | ENSG00000036549 | Myb/SANT | Known motif – High-throughput in vitro | SAATCCAW |