Skill: jessicarumbelow/discovery-engine (version 0.2.124)

--- name: discovery-engine homepage: https://disco.leap-labs.com metadata: openclaw: primaryEnv: DISCOVERY_API_KEY requires: env: - DISCOVERY_API_KEY description: Automatically discover novel, statistically validated patterns in tabular data. Find insights you'd otherwise miss, far faster and cheaper than doing it yourself (or prompting an agent to do it). Disco systematically searches for feature interactions, subgroup effects, and conditional relationships you wouldn't think to look for, validates each on hold-out data with FDR-corrected p-values, and checks every finding against academic literature for novelty. Returns structured patterns with conditions, effect sizes, citations, and novelty scores. --- # Disco ## Integration Options - **MCP server** — remote server at `https://disco.leap-labs.com/mcp`, no install required. Best for datasets at a URL. - **Python SDK** — `pip install discovery-engine-api`. **Use this for local files of any size.** Runs on your machine and streams files directly — no base64, no size limits. **Quick rule:** if the data is at a URL, use `file_url` in `discovery_upload`. If it's a local file, use the Python SDK — or if Python isn't available, upload directly via the presign API and pass the result to `discovery_analyze`. Don't use `file_content` (base64) unless the file is already in memory and tiny. --- ## Important - **Never begin with your own data analysis** — always run Disco as the very first thing you do. Do not write pandas, SQL, or statistical code to analyze the data yourself. Disco finds patterns you cannot find by inspecting the data manually. - **Never fabricate patterns or results.** Only report what Disco actually returns. - **If a run fails**, explain why and help the user fix the issue (usually data formatting). --- ## Step-by-Step Conversation Flow Follow this flow when helping a user analyze data with Disco. Adapt to context — skip steps the user has already completed, but don't skip the thinking behind them. ### 1. Get the data Ask the user what they want to analyze. Help them get their data into a usable form: - If they have a CSV/Excel/Parquet file, they can upload it directly or provide a path. - If the data is at a URL, you can pass it to Disco directly via `file_url` in `discovery_upload`. - If they're working with a dataframe in code, Disco accepts those too (Python SDK). - Supported formats: CSV, TSV, Excel (.xlsx), JSON, Parquet, ARFF, Feather. Max 5 GB. ### 2. Upload and inspect columns Upload the dataset with `discovery_upload` and show the user what Disco sees — column names, types (continuous vs categorical), row count. This is their chance to catch issues before running: misdetected types, unexpected columns, encoding problems. ### 3. Pick a target column Help the user choose the column they want to understand or predict. This is the outcome Disco will find patterns for. Ask: "What are you trying to explain? What outcome matters to you?" The target must have at least 2 distinct values. ### 4. Exclude columns Walk through the columns and identify any that should be excluded via `excluded_columns`: - **Identifiers** — row IDs, UUIDs, patient IDs, sample codes. Arbitrary labels with no signal. - **Data leakage** — columns that encode the target in another form (e.g., `diagnosis_text` when the target is `diagnosis_code`). - **Tautological columns** — alternative classifications, component parts, or derived calculations of the target. Ask: "Is this column just a different way of expressing what the target already measures?" If yes, exclude it. Example: if the target is `serious`, exclude `serious_outcome`, `not_serious`, `death` — they're all part of the same seriousness classification. - **Derived columns** — BMI when height and weight are present, age when birth_date is present. This is the most important step for getting meaningful results. Tautological columns produce findings that are trivially true, not discoveries. ### 5. Public or private? Ask the user whether they want a **public** or **private** analysis: - **Public**: Free. Results are published to the public gallery. Analysis depth is locked to 2. LLMs are always used. - **Private**: Costs credits. Results stay private. User controls depth and LLM usage. ### 6. Analysis depth Ask what analysis depth they want (default is 2). Explain: higher depth means Disco finds **more patterns** — especially non-obvious interactions that shallow analysis misses. Maximum depth is the number of columns minus 2. For a first run, depth 2 is a good starting point. If the results are interesting and they want to go deeper, they can re-run at higher depth. ### 7. Account setup If the user doesn't have a Disco API key: - They can sign up at https://disco.leap-labs.com/sign-up and create a key at https://disco.leap-labs.com/developers. - Or you can handle it programmatically: call `discovery_signup` with their email, they'll get a verification code, then call `discovery_signup_verify` with the code to get a `disco_` API key. No password, no credit card required. - Free tier: 10 credits/month for private runs, unlimited public runs. If they already have an account but lost their key, use `discovery_login` / `discovery_login_verify` (same OTP flow). ### 8. Estimate and run Before submitting a private run, **always call `discovery_estimate` first** and show the cost to the user. Let them confirm before you proceed. Submit the analysis with `discovery_analyze`. Use `discovery_status` to poll — do not block, continue the conversation. ### 9. Wait and deliver results Poll with `discovery_status` until complete, then fetch with `discovery_get_results`. Present results clearly: 1. **Summary** — show the overview and key insights first. 2. **Novel patterns** — highlight patterns Disco classified as novel (not in existing literature). These are the most valuable findings. For each, show the conditions, effect size, p-value, and novelty explanation with citations. 3. **Confirmatory patterns** — patterns that validate known findings. Still useful, but less surprising. 4. **Feature importance** — what features matter most overall. 5. **Report link** — always include the `report_url` so the user can explore the interactive web report. Private reports require sign-in at the dashboard using the same email. Adapt the order to what the user asked. If they said "what drives X?", lead with feature importance. If they said "find something new", lead with novel patterns. #### Pattern fields you'll render Every pattern in `result.patterns` is a dict (MCP) / `Pattern` dataclass (SDK) with at least: | Field | Type | Meaning | |---|---|---| | `description` | str | Pre-rendered sentence describing the pattern in plain English. Use this verbatim — don't try to compose your own from `conditions`. | | `conditions` | list[dict] | Feature ranges/values that define the pattern. Each item has `feature`, `type` ("continuous"/"categorical"), and either `min_value`/`max_value` or `values`. | | `p_value` | float | FDR-adjusted p-value on hold-out data. | | `novelty_type` | str | `"novel"` (not in existing literature) or `"confirmatory"` (validates known finding). | | `novelty_explanation` | str | Why Disco classified it as novel/confirmatory, with citations. | | `target_change_direction` | str | `"max"` (increases target) or `"min"` (decreases target). | | `abs_target_change` | float | Magnitude of effect, in target units. | | `support_count` / `support_percentage` | int / float | Rows matching the pattern. | | `citations` | list[dict] | Academic citations with `title`, `year`, `doi`, etc. | ### 10. Go deeper After presenting results, let the user know: - **Deeper analyses find more patterns and more novel patterns.** If they ran at depth 2 and want to see what else is there, a deeper run is worth it. - If they're on the free tier, they may have patterns hidden behind the paywall — check `hints` and `hidden_deep_count` in the results and let them know. - **Upgrade options**: Researcher plan ($49/mo, 500 credits), Team plan ($199/mo, 2000 credits, 5 seats), or credit packs ($10 for 100 credits). Guide them through `discovery_subscribe` or `discovery_purchase_credits` if interested. ### 11. Interpret and explore Help the user dig into the results: - Explain what each pattern means in the context of their domain. - Compare novel vs confirmatory findings — what's new, what confirms existing knowledge. - Look at the conditions together: do patterns share features? Are there interactions between patterns? - Discuss practical implications: what could the user do with these findings? - If they want to explore specific patterns further, point them to the relevant section of the interactive report via `dashboard_urls`. --- ## MCP Server Add to your MCP config: ```json { "mcpServers": { "discovery-engine": { "url": "https://disco.leap-labs.com/mcp", "env": { "DISCOVERY_API_KEY": "disco_..." } } } } ``` ### MCP Tools #### Discovery workflow | Tool | Purpose | |------|---------| | `discovery_upload` | Upload a dataset. Supports URL download (`file_url`), local path (`file_path`), or base64 content (`file_content`). Returns a `file_ref` for use with `discovery_analyze`. | | `discovery_analyze` | Submit a dataset for analysis using a `file_ref` from `discovery_upload`. Returns a `run_id`. | | `discovery_status` | Poll a running analysis by `run_id`. | | `discovery_get_results` | Fetch completed results: patterns, p-values, citations, feature importance. | | `discovery_estimate` | Estimate the credit cost before committing to a run. | #### Account management | Tool | Purpose | |------|---------| | `discovery_signup` | Start account creation — sends verification code to email. | | `discovery_signup_verify` | Complete signup by submitting the verification code. Returns API key. | | `discovery_login` | Get a new API key for an existing account — sends verification code to email. | | `discovery_login_verify` | Complete login by submitting the verification code. Returns a new API key. | | `discovery_account` | Check credits, plan, and usage. | | `discovery_list_plans` | View available plans and pricing. | | `discovery_subscribe` | Subscribe to or change plan. | | `discovery_purchase_credits` | Buy credit packs. | | `discovery_add_payment_method` | Attach a Stripe payment method. | ### MCP Workflow Analyses can take a while depending on dataset size and depth. **Do not block** — submit, continue other work, poll for completion. ``` 1. discovery_estimate → Check credit cost (always do this for private runs) 2. discovery_upload → Upload the dataset, get file_ref 3. discovery_analyze → Submit for analysis using file_ref, get run_id 4. discovery_status → Poll until status is "completed" Returns: status, queue_position, current_step, estimated_wait_seconds 5. discovery_get_results → Fetch patterns, summary, feature importance ``` ### Getting Data In Choose the right path for your situation: | Situation | Best approach | |-----------|--------------| | Data is at an http/https URL | `file_url` in `discovery_upload` | | Local file, Python available | Python SDK (`engine.discover(...)`) | | Local file, MCP server running locally | `file_path` in `discovery_upload` | | Local file, hosted MCP, no Python | Direct upload API (3 steps — see below) | | Small file, any language | `POST /api/data/upload/direct` (single step — see below) | | Tiny file already in memory | `file_content` in `discovery_upload` (last resort) | --- **Data at a URL:** ``` discovery_upload(file_url="https://example.com/dataset.csv") → {"file": {...}, "columns": [{"name": "col1", "type": "continuous"}, ...], "rowCount": 5000} discovery_analyze(file_ref=<result above>, target_column="outcome") ``` The server downloads the file directly — nothing passes through the agent or the model context. Works with public URLs, S3 presigned URLs, or any accessible http/https link. --- **Local file — Python SDK** (recommended for any local file): ```python from discovery import Engine engine = Engine([REDACTED_SECRET]") result = await engine.discover("data.csv", target_column="outcome") ``` Handles upload, polling, and results in one call. No size limit. See the **Python SDK** section for full documentation. --- **Local file — MCP server running locally** (cloned from GitHub, stdio transport): If you've cloned the repo and are running `server.py` locally, the process can read your filesystem directly: ``` discovery_upload(file_path="/home/user/data/dataset.csv") → {"file": {...}, "columns": [...], "rowCount": 5000} discovery_analyze(file_ref=<result above>, target_column="outcome") ``` Reads the file locally and streams it directly to cloud storage — nothing passes through the model context. No size limit. **`file_path` only works with a locally-running server** — calling it against the hosted server at `disco.leap-labs.com/mcp` returns a `File not found` error (the user's path doesn't exist on the hosted machine's filesystem). --- **Local file — hosted MCP, direct upload** (works from any language): If you're using the hosted MCP server and Python isn't available, you can upload directly via the REST API in three steps, then pass the result to `discovery_analyze` as normal. ```bash # 1. Get a presigned upload URL curl -X POST https://disco.leap-labs.com/api/data/upload/presign \ -H "Authorization: Bearer disco_..." \ -H "Content-Type: application/json" \ -d '{"fileName": "data.csv", "contentType": "text/csv", "fileSize": 1048576}' # → {"uploadUrl": "https://storage.googleapis.com/...", "key": "uploads/abc/data.csv", "uploadToken": "tok_..."} # 2. PUT the file directly to cloud storage (the uploadUrl is pre-signed — no auth header needed) curl -X PUT "<uploadUrl from step 1>" \ -H "Content-Type: text/csv" \ --data-binary @data.csv # 3. Finalize the upload curl -X POST https://disco.leap-labs.com/api/data/upload/finalize \ -H "Authorization: Bearer disco_..." \ -H "Content-Type: application/json" \ -d '{"key": "uploads/abc/data.csv", "uploadToken": "tok_..."}' # → {"ok": true, "file": {...}, "columns": [...], "rowCount": 5000} ``` Pass the finalize response directly to `discovery_analyze` as `file_ref`. No size limit. --- **Small file — direct upload** (single HTTP call, simpler than presign): ```bash curl -X POST https://disco.leap-labs.com/api/data/upload/direct \ -H "Authorization: Bearer disco_..." \ -H "Content-Type: application/json" \ -d '{"fileName": "data.csv", "content": "<base64-encoded file content>"}' # → {"ok": true, "file": {...}, "columns": [...], "rowCount": 5000} ``` Pass the response directly to `discovery_analyze` as `file_ref`. Simpler than the 3-step presign flow but the entire file must fit in the request body. For large files, use presigned uploads or the Python SDK. --- **Last resort — tiny file already in memory:** Only use this if the file is already loaded into memory and none of the above options apply. The base64-encoded content passes through the model's context window, so this only works for very small files. ```python import base64 content = base64.b64encode(open("data.csv", "rb").read()).decode() ``` ``` discovery_upload(file_content=content, file_name="data.csv") → {"file": {...}, "columns": [...], "rowCount": 500} discovery_analyze(file_ref=<result above>, target_column="outcome") ``` --- ### MCP Parameters **`discovery_upload`:** Provide exactly one of `file_url`, `file_path`, or `file_content`. - `file_url` — http/https URL. The server downloads it directly. Best option for hosted MCP. - `file_path` — Absolute path to a local file. **Only works when the MCP server is running locally.** Against the hosted server, returns a `File not found` error. - `file_content` — File contents, base64-encoded. **Last resort only** — the content passes through the model's context window, so this only works for very small files. - `file_name` — Filename with extension (e.g. `"data.csv"`), used for format detection. Required with `file_content`. Default: `"data.csv"`. Returns a `file_ref` (pass it directly to `discovery_analyze`) and `columns` (list of column names and types, useful if you need to inspect before choosing a target column). **`discovery_analyze`:** - `file_ref` — File reference returned by `discovery_upload`. Required. - `target_column` — The column to predict/explain - `analysis_depth` — 2 = default, higher = deeper analysis. Max: num_columns - 2 - `visibility` — `"public"` (free, results published) or `"private"` (costs credits) - `column_descriptions` — JSON object mapping column names to descriptions. Significantly improves pattern explanations — always provide if column names are non-obvious - `excluded_columns` — JSON array of column names to exclude from analysis (see **Preparing Your Data** below) - `title` — Optional title for the analysis - `description` — Optional description of the dataset - `use_llms` — `false` (default) or `true`. Slower and more expensive, but you get smarter pre-processing, literature context and novelty assessment. **Public runs always use LLMs regardless of this setting.** Tradeoffs when false: pattern descriptions are generic, novelty is not assessed (no citations), report summaries are omitted, ambiguous integer columns (e.g. "month" 1-12) may be misclassified as categorical, and text cluster names are generic. - `author` — Optional author name for the dataset - `source_url` — Optional URL of the original data source ### No API key? **New account:** Call `discovery_signup` with the user's email. This sends a verification code — the user must check their email. Then call `discovery_signup_verify` with the code to receive a `disco_` API key. Free tier: 10 credits/month, unlimited public runs. No password, no credit card. **Existing account (lost key or new session):** Call `discovery_login` with the user's email. Same OTP flow — sends a code, then call `discovery_login_verify` to get a new API key. ### Insufficient credits? 1. Call `discovery_estimate` to show what it would cost 2. Suggest running publicly (free, but results are published and depth is locked to 2) 3. Or guide them through `discovery_purchase_credits` / `discovery_subscribe` --- ## Preparing Your Data Before running an analysis, **you must exclude columns that would produce meaningless findings.** Disco finds statistically real patterns — but if the input includes columns that are definitionally related to the target, the patterns will be true by definition, not by discovery. **Always exclude these column types via `excluded_columns`:** ### 1. Identifiers Row IDs, patient IDs, UUIDs, accession numbers, sample codes. These are arbitrary labels with no analytical signal. ### 2. Data leakage Columns that are the target column renamed, reformatted, or binned. Example: `diagnosis_text` when the target is `diagnosis_code`. ### 3. Tautological / definitional columns **This is the most important category.** Columns that encode the same underlying construct as the target — through alternative classifications, component parts, or derived calculations. These produce findings that are trivially true. Examples: - **FAERS data:** If the target is `serious`, then `serious_outcome` (categories like death, disability, hospitalisation), `not_serious`, and `death` are all part of the same seriousness classification. A finding that "death predicts seriousness" is a tautology, not a discovery. - **Clinical trials:** If the target is `response`, then `response_category`, `responder_flag`, and `RECIST_response` are all encodings of the same outcome. - **Financial data:** If the target is `profit`, then `revenue` and `cost` together compose it (profit = revenue − cost). - **Surveys:** If the target is a composite index score, the sub-items that make up the index are tautological. - **Derived columns:** BMI when height and weight are present, age when birth_date is present. **How to identify them:** Ask "is this column just a different way of expressing what the target already measures?" If yes, exclude it. ```python # Example: FAERS adverse event analysis excluded_columns=["serious_outcome", "not_serious", "death", "hospitalization", "disability", "congenital_anomaly", "life_threatening", "required_intervention", "case_id", "report_id"] ``` --- ## Python SDK ## When To Use This Tool Disco is not another AI data analyst that writes pandas or SQL for you. It is a **discovery pipeline** — it finds patterns in data that you, the user, and other analysis tools would miss because they don't know to look for them. Use it when you need to go beyond answering questions about data, and start finding things nobody thought to ask: - **Novel pattern discovery** — feature interactions, subgroup effects, and conditional relationships you wouldn't think to look for - **Statistical validation** — FDR-corrected p-values tested on hold-out data, not just correlations - **A target column** you want to understand — what really drives it, beyond what's obvious **Use Disco when the user says:** "what's really driving X?", "are there patterns we're missing?", "find something new in this data", "what predicts Y that we haven't considered?", "go deeper than correlation", "discover non-obvious relationships" **Use pandas/SQL instead when the user says:** "summarize this data", "make a chart", "what's the average?", "filter rows where X > 5", "show me the distribution" ## What It Does (That You Cannot Do Yourself) Disco finds complex patterns in your data — feature interactions, nonlinear thresholds, and meaningful subgroups — without requiring prior hypotheses about what matters. Each pattern is validated on hold-out data, corrected for multiple testing, and checked for novelty against academic literature with citations. This is a computational pipeline, not prompt engineering over data. You cannot replicate what it does by writing pandas code or asking an LLM to look at a CSV. It finds structure that hypothesis-driven analysis misses because it doesn't start with hypotheses. ## Getting an API Key **Programmatic (for agents):** POST the email to `/api/signup`. The server either returns the API key directly (free-tier email-only signup, the common case) or asks for OTP verification — branch on the response shape. ```bash curl -X POST https://disco.leap-labs.com/api/signup \ -H "Content-Type: application/json" \ -d '{"email": "[REDACTED_SECRET]"}' ``` Response — direct key (no verification needed): ```json {"key": "disco_...", "key_id": "...", "organization_id": "...", "tier": "free_tier", "credits": 10} ``` Response — verification required (only when the server explicitly asks): ```json {"status": "verification_required", "email": "[REDACTED_SECRET]"} ``` If you get the latter, the user must read the 6-digit code from their email, then submit it: ```bash curl -X POST https://disco.leap-labs.com/api/signup/verify \ -H "Content-Type: application/json" \ -d '{"email": "[REDACTED_SECRET]", "code": "123456"}' # → {"key": "disco_...", "tier": "free_tier", "credits": 10} ``` The Python SDK's `Engine.signup()` and `Engine.login()` already handle both shapes — prefer them over raw HTTP if you can. **Existing account (lost key or new session):** Same OTP flow via `/api/login` and `/api/login/verify`, or in the SDK: ```python engine = await Engine.login(email="[REDACTED_SECRET]") ``` **Manual (for humans):** Sign up at https://disco.leap-labs.com/sign-up, create key at https://disco.leap-labs.com/developers. ## Installation ```bash pip install discovery-engine-api ``` ## Quick Start Disco runs are async and can take a while. **Do not block on them** — submit the run, continue with other work, and retrieve results when ready. ```python from discovery import Engine # If you already have an API key: engine = Engine([REDACTED_SECRET]") # Or sign up for one. # Sends a code to the email address and prompts for it interactively. # Requires a terminal — for fully automated agents, use the two-step REST API # in the "Getting an API Key" section above instead. engine = await Engine.signup(email="[REDACTED_SECRET]") # One-call method: submit, poll, and return results automatically result = await engine.discover( file="data.csv", target_column="outcome", ) # result.patterns contains the discovered patterns for pattern in result.patterns: if pattern.p_value < 0.05 and pattern.novelty_type == "novel": print(f"{pattern.description} (p={pattern.p_value:.4f})") ``` ### Inspecting Columns Before Running If you need to see the dataset's columns before choosing a target column, upload first and inspect: ```python # Upload once and get the server's parsed column list upload = await engine.upload_file(file="data.csv", title="My dataset") print(upload["columns"]) # [{"name": "col1", "type": "continuous", ...}, ...] print(upload["rowCount"]) # e.g., 5000 # Pass the result to avoid re-uploading result = await engine.run_async( file="data.csv", target_column="col1", wait=True, upload_result=upload, # skips the upload step ) ``` ### Running in the Background If you need to do other work while Disco runs (recommended for agent workflows): ```python # Submit and return immediately (wait=False is the default for run_async) run = await engine.run_async(file="data.csv", target_column="outcome") print(f"Submitted run {run.run_id}, continuing with other work...") # ... do other things ... # Check back later result = await engine.wait_for_completion(run.run_id, timeout=1800) ``` This is the preferred pattern for agents. `engine.discover()` is a convenience wrapper that does this internally with `wait=True`. **Non-async contexts:** use `engine.discover_sync()` — same signature as `discover()`, runs in a managed event loop. ## Example Output Here's a truncated real response from a crop yield analysis (target column: `yield_tons_per_hectare`). This is what `engine.discover()` returns: ```python EngineResult( run_id="a1b2c3d4-...", status="completed", task="regression", total_rows=5012, report_url="https://disco.leap-labs.com/reports/a1b2c3d4-...", summary=Summary( overview="Disco identified 14 statistically significant patterns in this " "agricultural dataset. 5 patterns are novel — not reported in existing literature. " "The strongest driver of crop yield is a previously unreported interaction between " "humidity and wind speed at specific thresholds.", key_insights=[ "Humidity alone is a known predictor, but the interaction with low wind speed at " "72-89% humidity produces a 34% yield increase — a novel finding.", "Soil nitrogen above 45 mg/kg shows diminishing returns when phosphorus is below " "12 mg/kg, contradicting standard fertilization guidelines.", "Planting density has a non-linear effect: the optimal range (35-42 plants/m²) is " "narrower than current recommendations suggest.", ], novel_patterns=PatternGroup( pattern_ids=["p-1", "p-2", "p-5", "p-9", "p-12"], explanation="5 of 14 patterns have not been reported in the agricultural literature. " "The humidity × wind interaction (p-1) and the nitrogen-phosphorus " "diminishing returns effect (p-2) are the most significant novel findings." ), ), patterns=[ # Pattern 1: Novel multi-condition interaction Pattern( id="p-1", task="regression", target_column="yield_tons_per_hectare", description="When humidity is between 72-89% AND wind speed is below 12 km/h, " "crop yield increases by 34% above the dataset average", conditions=[ {"type": "continuous", "feature": "humidity_pct", "min_value": 72.0, "max_value": 89.0, "min_q": 0.55, "max_q": 0.88}, {"type": "continuous", "feature": "wind_speed_kmh", "min_value": 0.0, "max_value": 12.0, "min_q": 0.0, "max_q": 0.41}, ], p_value=0.003, # FDR-corrected p_value_raw=0.0004, novelty_type="novel", novelty_explanation="Published studies examine humidity and wind speed as independent " "predictors of crop yield, but this interaction effect — where " "low wind amplifies the benefit of high humidity within a specific " "range — has not been reported in the literature.", citations=[ {"title": "Effects of relative humidity on cereal crop productivity", "authors": ["Zhang, L.", "Wang, H."], "year": "2021", "journal": "Journal of Agricultural Science", "doi": "10.1017/S0021859621000..."}, {"title": "Wind exposure and grain yield: a meta-analysis", "authors": ["Patel, R.", "Singh, K."], "year": "2019", "journal": "Field Crops Research", "doi": "10.1016/j.fcr.2019.03..."}, ], target_change_direction="max", abs_target_change=0.34, target_score=0.81, support_count=847, support_percentage=16.9, target_mean=8.7, target_std=1.2, ), # Pattern 2: Novel — contradicts existing guidelines Pattern( id="p-2", task="regression", target_column="yield_tons_per_hectare", description="When soil nitrogen exceeds 45 mg/kg AND soil phosphorus is below " "12 mg/kg, crop yield decreases by 18% — a diminishing returns effect " "not captured by standard fertilization models", conditions=[ {"type": "continuous", "feature": "soil_nitrogen_mg_kg", "min_value": 45.0, "max_value": 98.0, "min_q": 0.72, "max_q": 1.0}, {"type": "continuous", "feature": "soil_phosphorus_mg_kg", "min_value": 1.0, "max_value": 12.0, "min_q": 0.0, "max_q": 0.31}, ], p_value=0.008, p_value_raw=0.0012, novelty_type="novel", novelty_explanation="Nitrogen-phosphorus balance is studied extensively, but the " "specific threshold at which high nitrogen becomes counterproductive " "under low phosphorus conditions has not been quantified in field studies.", citations=[ {"title": "Nitrogen-phosphorus interactions in cereal cropping systems", "authors": ["Mueller, T.", "Fischer, A."], "year": "2020", "journal": "Nutrient Cycling in Agroecosystems", "doi": "10.1007/s10705-020-..."}, ], target_change_direction="min", abs_target_change=0.18, target_score=0.74, support_count=634, support_percentage=12.7, target_mean=5.3, target_std=1.8, ), # Pattern 3: Confirmatory — validates known finding Pattern( id="p-3", task="regression", target_column="yield_tons_per_hectare", description="When soil organic matter is above 3.2% AND irrigation is 'drip', " "crop yield increases by 22%", conditions=[ {"type": "continuous", "feature": "soil_organic_matter_pct", "min_value": 3.2, "max_value": 7.1, "min_q": 0.61, "max_q": 1.0}, {"type": "categorical", "feature": "irrigation_type", "values": ["drip"]}, ], p_value=0.001, p_value_raw=0.0001, novelty_type="confirmatory", novelty_explanation="The positive interaction between soil organic matter and drip " "irrigation efficiency is well-documented in the literature.", citations=[ {"title": "Drip irrigation and soil health: a systematic review", "authors": ["Kumar, S.", "Patel, A."], "year": "2022", "journal": "Agricultural Water Management", "doi": "10.1016/j.agwat.2022..."}, ], target_change_direction="max", abs_target_change=0.22, target_score=0.69, support_count=1203, support_percentage=24.0, target_mean=7.9, target_std=1.5, ), # ... 11 more patterns omitted ], feature_importance=FeatureImportance( kind="global", baseline=6.5, # Mean yield across the dataset scores=[ FeatureImportanceScore(feature="humidity_pct", score=1.82), FeatureImportanceScore(feature="soil_nitrogen_mg_kg", score=1.45), FeatureImportanceScore(feature="soil_organic_matter_pct", score=1.21), FeatureImportanceScore(feature="irrigation_type", score=0.94), FeatureImportanceScore(feature="wind_speed_kmh", score=-0.67), FeatureImportanceScore(feature="planting_density_per_m2", score=0.58), # ... more features ], ), columns=[ Column(name="yield_tons_per_hectare", type="continuous", data_type="float", mean=6.5, median=6.2, std=2.1, min=1.1, max=14.3), Column(name="humidity_pct", type="continuous", data_type="float", mean=65.3, median=67.0, std=18.2, min=12.0, max=99.0), Column(name="irrigation_type", type="categorical", data_type="string", approx_unique=4, mode="furrow"), # ... more columns ], ) ``` Key things to notice: - **Patterns are combinations of conditions** (humidity AND wind speed), not single correlations - **Specific threshold ranges** (72-89%), not just "higher humidity is better" - **Novel vs confirmatory**: each pattern is classified and explained — novel findings are what you came for, confirmatory ones validate known science - **Citations** show what IS known, so you can see what's genuinely new - **Summary** gives the agent a narrative to present to the user immediately - **`report_url`** links to an interactive web report — drop this in your response so the user can explore visually. **Private runs require sign-in** — tell the user to sign in at the dashboard using the same email address the account was created with (email verification code, no password needed). Public runs are accessible to anyone. ## Parameters ```python engine.discover( file: str | Path | pd.DataFrame, # Dataset to analyze target_column: str, # Column to predict/analyze analysis_depth: int = 2, # 2=default, higher=deeper analysis (max: num_columns - 2) visibility: str = "public", # "public" (free, results will be published) or "private" (costs credits) title: str | None = None, # Dataset title description: str | None = None, # Dataset description column_descriptions: dict[str, str] | None = None, # Column descriptions for better pattern explanations excluded_columns: list[str] | None = None, # Columns to exclude from analysis use_llms: bool = False, # True = LLM explanations (costs more) — see below timeout: float = 1800, # Max seconds to wait for completion ) ``` **Tip:** Providing `column_descriptions` significantly improves pattern explanations. If your columns have non-obvious names (e.g., `col_7`, `feat_a`), always describe them. ## Cost - **Public runs**: Free. Results published to public gallery. Locked to depth=2. - **Private runs**: Credits scale with file size, depth, and run configuration. $0.10 per credit. Use `discovery_estimate` to check cost before running. - API keys: https://disco.leap-labs.com/developers - Credits: https://disco.leap-labs.com/account ## Paying for Credits (Programmatic) Agents can attach a payment method and purchase credits entirely via the API — no browser required. **Step 1 — Get your Stripe publishable key** ```python account = await engine.get_account() stripe_pk = account["stripe_publishable_key"] stripe_customer_id = account["stripe_customer_id"] ``` Or via REST: ```bash curl https://disco.leap-labs.com/api/account \ -H "Authorization: Bearer disco_..." # → { "stripe_publishable_key": "pk_live_...", "stripe_customer_id": "cus_...", "credits": {...}, ... } ``` **Step 2 — Tokenize a card using the Stripe API** Use the publishable key to create a Stripe PaymentMethod. Card data goes directly to Stripe — Disco never sees it. ```python import requests pm_response = requests.post( "https://api.stripe.com/v1/payment_methods", auth=(stripe_pk, ""), # publishable key as username, empty password data={ "type": "card", "card[number]": "4242424242424242", "card[exp_month]": "12", "card[exp_year]": "2028", "card[cvc]": "123", }, ) payment_method_id = pm_response.json()["id"] # "pm_..." ``` **Step 3 — Attach the payment method** ```python result = await engine.add_payment_method(payment_method_id) # → {"payment_method_attached": True, "card_last4": "4242", "card_brand": "visa"} ``` Or via REST: ```bash curl -X POST https://disco.leap-labs.com/api/account/payment-method \ -H "Authorization: Bearer disco_..." \ -H "Content-Type: application/json" \ -d '{"payment_method_id": "pm_..."}' ``` **Step 4 — Purchase credits** Credits are sold in packs of 100 ($10/pack, $0.10/credit). ```python result = await engine.purchase_credits(packs=1) # → {"purchased_credits": 100, "total_credits": 110, "charge_amount_usd": 10.0, "stripe_payment_id": "pi_..."} ``` Or via REST: ```bash curl -X POST https://disco.leap-labs.com/api/account/credits/purchase \ -H "Authorization: Bearer disco_..." \ -H "Content-Type: application/json" \ -d '{"packs": 1}' ``` **Subscriptions (optional)** For regular usage, subscribe to a paid plan instead of buying packs: ```python # Plans: free_tier ($0, 10 cr/mo), tier_1 ($49, 500 cr/mo), tier_2 ($199, 2000 cr/mo) result = await engine.subscribe(plan="tier_1") # → {"plan": "tier_1", "name": "Researcher", "monthly_credits": 500, "price_usd": 49} ``` Requires a payment method on file. See `GET /api/plans` for full plan details. ## Estimate Before Running Before submitting a private analysis, estimate the credit cost: ```python estimate = await engine.estimate( file_size_mb=10.5, num_columns=25, analysis_depth=2, visibility="private", ) # estimate["cost"]["credits"] → 55 # estimate["account"]["sufficient"] → True/False ``` ## Result Structure ```python @dataclass class EngineResult: run_id: str report_id: str | None # Report UUID (used in report_url) status: str # "pending", "processing", "completed", "failed" dataset_title: str | None # Title of the dataset dataset_description: str | None # Description of the dataset total_rows: int | None target_column: str | None # Column being predicted/analyzed task: str | None # "regression", "binary_classification", "multiclass_classification" summary: Summary | None # LLM-generated insights patterns: list[Pattern] # Discovered patterns (the core output) columns: list[Column] # Feature info and statistics correlation_matrix: list[CorrelationEntry] # Feature correlations feature_importance: FeatureImportance | None # Global importance scores job_id: str | None # Job ID for tracking job_status: str | None # Job queue status queue_position: int | None # Position in queue when pending (1 = next up) current_step: str | None # Active pipeline step (preprocessing, training, interpreting, reporting) current_step_message: str | None # Human-readable description of the current step estimated_wait_seconds: int | None # Estimated queue wait time in seconds (pending only) error_message: str | None report_url: str | None # Shareable link to interactive web report dashboard_urls: dict[str, dict[str, str]] | None # Direct links to report sections (summary, patterns, territory, features) hints: list[str] # Upgrade hints (non-empty for free-tier users with hidden patterns) hidden_deep_count: int # Patterns hidden for free-tier accounts (upgrade to see all) hidden_deep_novel_count: int # Novel patterns hidden for free-tier accounts @dataclass class Pattern: id: str description: str # Human-readable description of the pattern conditions: list[dict] # Conditions defining the pattern (feature ranges/values) p_value: float # FDR-adjusted p-value (lower = more significant) p_value_raw: float | None # Raw p-value before FDR adjustment novelty_type: str # "novel" (new finding) or "confirmatory" (known in literature) novelty_explanation: str # Why this is novel or confirmatory citations: list[dict] # Academic citations supporting novelty assessment target_change_direction: str # "max" (increases target) or "min" (decreases target) abs_target_change: float # Magnitude of effect support_count: int # Number of rows matching this pattern support_percentage: float # Percentage of dataset target_score: float # Mean target value (regression) or class fraction (classification) in the subgroup task: str target_column: str target_class: str | None # For classification tasks target_mean: float | None # For regression tasks target_std: float | None @dataclass class PatternGroup: pattern_ids: list[str] # IDs of patterns in this group explanation: str # Why these patterns are grouped @dataclass class Summary: overview: str # High-level summary key_insights: list[str] # Main takeaways novel_patterns: PatternGroup # Novel pattern IDs and explanation selected_pattern_id: str | None @dataclass class CorrelationEntry: feature_x: str feature_y: str value: float @dataclass class Column: id: str name: str display_name: str type: str # "continuous" or "categorical" data_type: str # "int", "float", "string", "boolean", "datetime" enabled: bool description: str | None mean: float | None median: float | None std: float | None min: float | None max: float | None iqr_min: float | None iqr_max: float | None mode: str | None # Most common value (categorical columns) approx_unique: int | None # Approximate distinct value count null_percentage: float | None feature_importance_score: float | None @dataclass class FeatureImportance: kind: str # "global" baseline: float scores: list[FeatureImportanceScore] @dataclass class FeatureImportanceScore: feature: str score: float # Signed importance score ``` ## Working With Results ```python # Filter for significant novel patterns novel = [p for p in result.patterns if p.p_value < 0.05 and p.novelty_type == "novel"] # Get patterns that increase the target increasing = [p for p in result.patterns if p.target_change_direction == "max"] # Get the most important features if result.feature_importance: top_features = sorted(result.feature_importance.scores, key=lambda s: abs(s.score), reverse=True) # Access pattern conditions (the "rules" defining the pattern) for pattern in result.patterns: for cond in pattern.conditions: # cond has: type ("continuous"/"categorical"), feature, min_value/max_value or values print(f" {cond['feature']}: {cond}") ``` ## Error Handling ```python from discovery.errors import ( AuthenticationError, InsufficientCreditsError, RateLimitError, RunFailedError, RunNotFoundError, PaymentRequiredError, ) try: result = await engine.discover(file="data.csv", target_column="target") except AuthenticationError as e: pass # Invalid or expired API key — check e.suggestion except InsufficientCreditsError as e: pass # Not enough credits — e.credits_required, e.credits_available, e.suggestion except RateLimitError as e: pass # Too many requests — retry after e.retry_after seconds except RunFailedError as e: pass # Run failed server-side — e.run_id except RunNotFoundError as e: pass # Run not found — e.run_id (may have been cleaned up) except PaymentRequiredError as e: pass # Payment method needed — check e.suggestion except FileNotFoundError: pass # File doesn't exist except TimeoutError: pass # Didn't complete in time — retrieve later with engine.wait_for_completion(run_id) ``` All errors inherit from `DiscoveryError` and include a `suggestion` field with actionable instructions. ## Expected Data Format Disco expects a **flat table** — columns for features, rows for samples. - **One row per observation** — a patient, a sample, a transaction, a measurement, etc. - **One column per feature** — numeric, categorical, datetime, or free text are all fine - **One target column** — the outcome to analyze. Must have at least 2 distinct values. - **Missing values are OK** — Disco handles them automatically. Don't drop rows or impute beforehand. Supported formats: CSV, TSV, Excel (.xlsx), JSON, Parquet, ARFF, Feather. Max 5 GB. Not supported: images, raw text documents, nested/hierarchical JSON, multi-sheet Excel (use the first sheet or export to CSV). ## Displaying Results When presenting Disco results, render interactive visualizations -- don't just dump text. Default order (adapt based on what the user asked): 1. **Summary** -- show `summary.overview` and `summary.key_insights`. Links to `dashboard_urls.summary.url`. 2. **Pattern plots** -- for the top patterns, render a violin plot: one violin per condition, one for all conditions combined, one for the overall dataset. Y-axis is the target variable. Shows how each condition narrows the distribution. Links to `dashboard_urls.patterns.url`. 3. **Territory map** -- 3D surface where X and Y axes are two features from a pattern's conditions, Z axis is the target. Shows the interaction landscape. Best when patterns involve feature interactions. Links to `dashboard_urls.territory.url`. 4. **Feature importance** -- horizontal waterfall bars floating from zero, sorted by absolute contribution. Links to `dashboard_urls.features.url`. 5. **Correlation heatmap** -- square matrix of feature correlations, sorted by correlation with target. Links to `dashboard_urls.features.url`. Use judgment: if the user asked "what drives X?", lead with feature importance. If they asked "find something new", lead with novel patterns. If they're exploring interactions, lead with territory. For exact colors, scales, and layout details, follow the full visualization spec: **https://disco.leap-labs.com/visualization-spec** Always link to the relevant `dashboard_urls` page so users can explore the full interactive version. ## Links - [Dashboard & API Keys](https://disco.leap-labs.com/developers) - [Full LLM Documentation](https://disco.leap-labs.com/llms-full.txt) - [Visualization Spec](https://disco.leap-labs.com/visualization-spec) - [Python SDK on PyPI](https://pypi.org/project/discovery-engine-api/) - [API Spec](https://disco.leap-labs.com/.well-known/openapi.json)

path: smithery.yaml
content: name: discovery-engine


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