多原子イオンを点置換した新しい結晶構造作成ログ（三角錐形・平面三角形編）


### 複数の多原子イオンに対して，点置換するプログラムを実行
```terminal
time ./do_mk_polyatomic_ion_replaced_point_poscar_for_trigonal_pyramidal_planar_shape.sh
```

target_ion_name: CO3
central_atom_symbol: C
neighboring_atom_symbol: O
bond_length_lower_end: 0.99
bond_length_upper_end: 1.66
target_npy_p: ../get_some_ion_contained_pos_folder_p_list/CO3_contained_poscar_folder_path_list_ver2.npy
os.path.exists(target_npy_p): True
100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 1143/1143 [00:47<00:00, 23.87it/s]

real 0m48.528s
user 4m8.260s
sys 0m10.425s



+ 1544643
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/3fc08db9-489b-f455-3997-82491792fce9.png)
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/74cf479d-4dac-3865-73c7-e77bf52262f4.png)
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/91d8c1b7-9704-712b-de88-0d105da63faf.png)
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/4ee6d9b8-f587-b7f5-2bca-ec34353fd178.png)
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/7db3fe15-0a79-1312-69c5-0a657051a97a.png)





+ 1010917
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/013d4d77-26be-8063-c27e-c42d90bd9670.png)







target_ion_name: IO3
central_atom_symbol: I
neighboring_atom_symbol: O
bond_length_lower_end: 1.49
bond_length_upper_end: 2.35
target_npy_p: ../get_some_ion_contained_pos_folder_p_list/IO3_contained_poscar_folder_path_list_ver2.npy
os.path.exists(target_npy_p): True
100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 200/200 [00:07<00:00, 27.49it/s]

real    0m8.098s
user    0m34.177s
sys     0m2.785s


+ 1509389
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/01f7c526-88f8-327a-4cd5-c0786a97b16e.png)
![image.png](https://qiita-image-store.s3.ap-northeast-1.amazonaws.com/0/3487151/9bec6ccb-956c-2b96-2e69-41e39c9d39e4.png)






target_ion_name: BrO3
central_atom_symbol: Br
neighboring_atom_symbol: O
bond_length_lower_end: 1.33
bond_length_upper_end: 2.12
target_npy_p: ../get_some_ion_contained_pos_folder_p_list/BrO3_contained_poscar_folder_path_list_ver2.npy
os.path.exists(target_npy_p): True
100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 20/20 [00:00<00:00, 35.94it/s]

real    0m1.077s
user    0m2.471s
sys     0m1.029s
target_ion_name: ClO3
central_atom_symbol: Cl
neighboring_atom_symbol: O
bond_length_lower_end: 1.22
bond_length_upper_end: 1.94
target_npy_p: ../get_some_ion_contained_pos_folder_p_list/ClO3_contained_poscar_folder_path_list_ver2.npy
os.path.exists(target_npy_p): True
100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 95/95 [00:03<00:00, 31.63it/s]

real    0m3.515s
user    0m14.051s
sys     0m1.944s















target_ion_name: NO3
central_atom_symbol: N
neighboring_atom_symbol: O
bond_length_lower_end: 0.94
bond_length_upper_end: 1.61
target_npy_p: ../get_some_ion_contained_pos_folder_p_list/NO3_contained_poscar_folder_path_list_ver2.npy
os.path.exists(target_npy_p): True
100%|████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 5242/5242 [04:09<00:00, 21.02it/s]

real    4m10.225s
user    21m28.008s
sys     0m51.900s

real    4m22.954s
user    22m18.712s
sys     0m57.671s