NothingMuch/GO-Terms huggingface dataset:
Any process which produces a useful metabolic compound from derivatives of it without de novo synthesis, as carried out by individual cells.
cellular metabolic compound salvage
Any process that generates a pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose, from derivatives of it, without de novo synthesis.
pyrimidine nucleoside salvage
Any process which produces a purine deoxyribonucleoside from derivatives of it, without de novo synthesis.
purine deoxyribonucleoside salvage
Any process that generates a pyrimidine deoxyribonucleoside from derivatives of it, without de novo synthesis.
pyrimidine deoxyribonucleoside salvage
Any process which produces an amino acid from derivatives of it, without de novo synthesis.
amino acid salvage
The receptor metabolic process that results in grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response.
receptor clustering
Any process that modulates the extent to which blood vessels can be pervaded by fluid.
regulation of vascular permeability
Binding to tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages.
tumor necrosis factor binding
Binding to ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.
ubiquitin binding
The process in which nucleated precursor cells lose their nucleus during erythrocyte maturation.
erythrocyte enucleation
A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine.
hindgut contraction
Any process that modulates the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.
regulation of hindgut contraction
Any process involved in the conversion of a primary snoRNA family RNA transcript into a mature snoRNA (eukaryota) or sRNA (archaea).
sno(s)RNA processing
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.
response to cation stress
Binding to an anion, a charged atom or group of atoms with a net negative charge.
anion binding
Binding to a cation, a charged atom or group of atoms with a net positive charge.
cation binding
Any process which produces a nucleotide, a compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety, from derivatives of it without de novo synthesis.
nucleotide salvage
Any process which produces a nucleotide, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide), from derivatives of it without de novo synthesis.
nucleoside salvage
Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.
RNA polymerase core enzyme binding
Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.
amine binding
Binding to an organic acid, any acidic compound containing carbon in covalent linkage.
organic acid binding
Binding to an alcohol, any of a class of alkyl compounds containing a hydroxyl group.
alcohol binding
The volume enclosed within the lysosomal membrane.
lysosomal lumen
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.
response to external biotic stimulus
Binding to glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.
glycosphingolipid binding
Binding to alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.
alkanesulfonate binding
The directed movement of a bacteriocin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Bacteriocins are a group of antibiotics produced by bacteria and are encoded by a group of naturally occurring plasmids, e.g. Col E1. Bacteriocins are toxic to bacteria closely related to the bacteriocin producing strain.
bacteriocin transport
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular organelle
Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi.
extracellular organelle
The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen.
organelle lumen
Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
receptor complex
A ribosome contained within a chloroplast.
chloroplast ribosome
A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha, beta and gamma. Provides an integral part of the structural scaffolding of basement membranes.
laminin complex
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.
response to morphine
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.
response to alkaloid
The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.
eosinophil activation
Any process that modulates the frequency, rate or extent of protein binding.
regulation of protein binding
Binding to a proteoglycan, any glycoprotein in which the carbohydrate units are glycosaminoglycans.
proteoglycan binding
The covalent alteration of one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule, resulting in a change in its properties.
macromolecule modification
The covalent attachment of a glycosyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.
macromolecule glycosylation
The covalent attachment of a methyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.
macromolecule methylation
Any process that modulates the frequency, rate or extent of skeletal muscle.
regulation of skeletal muscle tissue regeneration
Binding to a basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transcriptional networks of many developmental pathways.
bHLH transcription factor binding
Any process that modulates the frequency, rate or extent of cellular respiration, the enzymatic release of energy from organic compounds.
regulation of cellular respiration
Any process that modulates the frequency, rate or extent of fermentation, the anaerobic enzymatic conversion of organic compounds, especially carbohydrates, to other compounds, especially to ethyl alcohol, resulting in energy in the form of adenosine triphosphate (ATP).
regulation of fermentation
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and the processes involved in the liberation of energy from these substances.
regulation of generation of precursor metabolites and energy
Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of xylose.
regulation of D-xylose catabolic process
Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates.
regulation of carbohydrate catabolic process
The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.
pigmentation
The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to a UV light stimulus.
pigment accumulation in response to UV light
The aggregation of coloring matter in a particular location in a tissue, occurring in response to a UV light stimulus.
pigment accumulation in tissues in response to UV light
The aggregation of the pigment anthocyanin in a particular location in a tissue, occurring in response to a UV light stimulus.
anthocyanin accumulation in tissues in response to UV light
The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus.
cellular pigment accumulation
Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
regulation of RNA splicing
The directed movement of substances from endosomes to pigment granules.
endosome to pigment granule transport
Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs.
regulation of RNA stability
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
regulation of mRNA stability
Prevention of degradation of RNA molecules.
RNA stabilization
Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.
regulation of protein homodimerization activity
Heterodimeric hormone composed of an inhibin alpha subunit complexed with either an inhibin beta-A subunit, to form inhibin A, or an inhibin beta-B subunit, to form inhibin B.
inhibin complex
Any process that modulates the frequency, rate or extent of the formation of a bipolar filament composed of myosin II molecules.
regulation of myosin II filament assembly
A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.
tRNA methyltransferase complex
The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis.
blood vessel endothelial cell migration
Any process that modulates the frequency, rate or extent of the migration of the endothelial cells of blood vessels.
regulation of blood vessel endothelial cell migration
The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
endothelial cell migration
Any process that modulates the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
regulation of kinase activity
Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.
regulation of lipid kinase activity
Any process that modulates the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
regulation of translation in response to oxidative stress
Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
regulation of translation in response to osmotic stress
Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
regulation of translational initiation in response to osmotic stress
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of inorganic nitrogen.
cellular response to nitrogen levels
Any process involved in sustaining the fidelity and copy number of DNA repeat elements.
maintenance of DNA repeat elements
The creation of two or more plastids by division of one plastid. A plastid is any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA.
plastid fission
Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.
peroxisomal transport
Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment.
regulation of respiratory gaseous exchange
The region of a bacterial cell to which the DNA is confined.
bacterial nucleoid
The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.
nuclear replication fork
The Y-shaped region of a cytoplasmic replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.
cytoplasmic replication fork
A multi-component enzymatic machine at the nuclear replication fork, which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins.
nuclear replisome
The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.
amide biosynthetic process
The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin.
keratinocyte proliferation
The chemical reactions and pathways resulting in the breakdown of a macromolecule, initiated by covalent modification of the target molecule.
modification-dependent macromolecule catabolic process
The chemical reactions and pathways resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3'-end of the target RNA.
polyadenylation-dependent RNA catabolic process
The chemical reactions and pathways resulting in the formation of a cephalosporin, any of large class of tetracyclic triterpene broad-spectrum antibiotics similar both chemically and in their mode of action to penicillin, first isolated from the culture filtrates of mediterranean fungus acremonium (cephalosporium acremonium), and effective against gram-positive bacteria.
cephalosporin biosynthetic process
A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.
host cell
A double-enveloped cell compartment, composed of the endosymbiont with its plasmalemma (as inner envelope) and an outer envelope (the perisymbiontic membrane) derived from the host cell.
host symbiosome
A double-enveloped cell compartment, composed of an endosymbiont with its plasmalemma (as inner envelope) and a non-endosymbiotic outer envelope (the perisymbiontic membrane).
symbiosome
A symbiosome containing any of various structurally modified bacteria, such as those occurring on the root nodules of leguminous plants.
bacteroid-containing symbiosome
A membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).
peribacteroid membrane
A symbiosome containing any of various structurally modified bacteria, such as those occurring on the root nodules of leguminous plants, of a host cell.
host bacteroid-containing symbiosome
The outer layer of the pollen grain wall which is composed primarily of sporopollenin.
exine
The outer part of the exine, which stains positively with basic fuchsin in optical microscopy and has higher electron density in conventionally prepared TEM sections.
ectexine
The outer, sculptured layer of the exine, which lies above the nexine.
sexine
The directed movement of peripheral cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism.
reverse cholesterol transport
The process in which a specialized structure (cell, tissue or organ) loses structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these structures can revert back to the features of their ancestors.
dedifferentiation
The process in which a specialized cell loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.
cell dedifferentiation
The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell regardless of its environment; upon determination, the cell fate cannot be reversed.
photoreceptor cell fate determination
The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.
photoreceptor cell fate specification
The process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure. A spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.
sporulation
The formation of spores derived from the products of meiosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.
sexual sporulation resulting in formation of a cellular spore
Any process that modulates the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.
regulation of sporulation
Any process that activates, maintains or increases the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.
positive regulation of sporulation
Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.
negative regulation of sporulation
Any process that modulates the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.
regulation of sexual sporulation resulting in formation of a cellular spore
Any process that activates, maintains or increases the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.
positive regulation of sexual sporulation resulting in formation of a cellular spore
Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.
negative regulation of sexual sporulation resulting in formation of a cellular spore
Any process that modulates the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.
regulation of asexual sporulation resulting in formation of a cellular spore
Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.
negative regulation of asexual sporulation resulting in formation of a cellular spore
Any process that activates, maintains or increases the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.
positive regulation of asexual sporulation resulting in formation of a cellular spore
The process that begins with the production and formation of structures and molecules in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.
acquisition of nutrients from host
A process in which microorganisms of the same species attach to and grow on an inanimate surface such as a rock or pipe, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.
single-species biofilm formation on inanimate substrate
Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by any of the organs or tissues in an organ system.
regulation of system process
Any process that modulates the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
regulation of digestive system process
Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.
regulation of excretion
Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.
regulation of respiratory system process
Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.
regulation of cellular component biogenesis
Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.
positive regulation of cellular component biogenesis