NothingMuch/GO-Terms huggingface dataset:
The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.
galactolipid anabolism
galactolipid biosynthesis
galactolipid formation
galactolipid synthesis
The chemical reactions and pathways resulting in the breakdown of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.
galactolipid breakdown
galactolipid catabolism
galactolipid degradation
The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).
glycolipid breakdown
glycolipid catabolism
glycolipid degradation
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.
atrazine breakdown
atrazine catabolism
atrazine degradation
The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanol.
methane biosynthesis from methanol
methane biosynthetic process from methanol
The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.
galactose breakdown
galactose catabolism
galactose degradation
The chemical reactions and pathways involving glucarate, the dianion of glucaric acid, an aldaric acid derived from either glucose or gulose. There are two enantiomers L- and D-glucarate.
glucarate metabolism
The chemical reactions and pathways resulting in the formation of glucarate, the anion of glucaric acid.
glucarate anabolism
glucarate biosynthesis
glucarate formation
glucarate synthesis
The chemical reactions and pathways resulting in the breakdown of glucarate, the anion of glucaric acid.
glucarate breakdown
glucarate catabolism
glucarate degradation
The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid (3,4,5-trihydroxybenzoic acid).
gallate breakdown
gallate catabolism
gallate degradation
gallate metabolic process
gallate metabolism
gallic acid catabolic process
gallic acid catabolism
gallic acid metabolic process
gallic acid metabolism
The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.
alditol metabolism
The chemical reactions and pathways resulting in the formation of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.
alditol anabolism
alditol biosynthesis
alditol formation
alditol synthesis
The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.
galactitol metabolism
The chemical reactions and pathways resulting in the breakdown of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.
alditol breakdown
alditol catabolism
alditol degradation
The chemical reactions and pathways resulting in the formation of hexitols, any alditol with a chain of six carbon atoms in the molecule.
hexitol anabolism
hexitol biosynthesis
hexitol formation
hexitol synthesis
The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.
hexitol breakdown
hexitol catabolism
hexitol degradation
The chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.
dolichol anabolism
dolichol biosynthesis
dolichol formation
dolichol synthesis
The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid.
acetate anabolism
acetate biosynthesis
acetate formation
acetate synthesis
The chemical reactions and pathways resulting the addition of oxygen to elemental sulfur.
sulphur oxidation
The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate.
sulphide oxidation
Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
cellular detoxification of superoxide radicals
removal of O2-
removal of oxygen free radicals
The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.
triacylglycerol biosynthesis
triacylglycerol biosynthetic process
triglyceride anabolism
triglyceride biosynthesis
triglyceride formation
triglyceride synthesis
The chemical reactions and pathways resulting in the breakdown of a triglyceride, any triester of glycerol.
triacylglycerol catabolic process
triacylglycerol catabolism
triglyceride breakdown
triglyceride catabolism
triglyceride degradation
The chemical reactions and pathways involving sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate, an aromatic hydrocarbon.
sophorosyloxydocosanoate metabolism
The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.
L-cysteine breakdown
L-cysteine catabolism
L-cysteine degradation
The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including pyruvate.
L-cysteine breakdown to pyruvate
L-cysteine degradation to pyruvate
The chemical reactions and pathways resulting in the breakdown of L-cysteine, via the intermediate cystine.
L-cysteine breakdown via cystine
L-cysteine degradation via cystine
The chemical reactions and pathways involving 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline. The presence of hydroxyproline is essential to produce stable triple helical tropocollagen, hence the problems caused by ascorbate deficiency in scurvy. This unusual amino acid is also present in considerable amounts in the major glycoprotein of primary plant cell walls.
4-hydroxyproline metabolism
The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA.
L-lysine breakdown to acetyl-CoA
L-lysine degradation to acetyl-CoA
The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.
L-lysine breakdown
L-lysine catabolism
L-lysine degradation
The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-enantiomers of amino acids.
D-amino acid breakdown
D-amino acid catabolism
D-amino acid degradation
The chemical reactions and pathways involving beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.
beta-alanine metabolism
The chemical reactions and pathways resulting in the formation of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.
beta-alanine anabolism
beta-alanine biosynthesis
beta-alanine formation
beta-alanine synthesis
The chemical reactions and pathways resulting in the breakdown of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.
beta-alanine breakdown
beta-alanine catabolism
beta-alanine degradation
The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.
methylgallate metabolism
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including proline.
arginine breakdown to proline
arginine degradation to proline
The chemical reactions and pathways involving hexachlorocyclohexane, a cyclohexane derivative with 6 chlorine atoms attached to the hexane ring. Hexachlorocyclohexane consists of a mixture of 8 different isomers and was used a commercial insecticide. It is persistent in the environment, causing serious soil pollution.
hexachlorocyclohexane metabolism
The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.
cyanide metabolism
The chemical reactions and pathways involving stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline found in alfalfa, chrysanthemum, and citrus plants.
stachydrine metabolic process
stachydrine metabolism
The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.
pyridine metabolism
The chemical reactions and pathways involving pentitols, any alditol with a chain of five carbon atoms in the molecule.
pentitol metabolism
The chemical reactions and pathways involving aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.
aldonic acid metabolism
The chemical reactions and pathways involving D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.
D-gluconate metabolism
The chemical reactions and pathways involving ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.
ketogluconate metabolism
The chemical reactions and pathways involving L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.
L-idonate metabolism
The chemical reactions and pathways involving keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.
keto-D-gluconate metabolism
The chemical reactions and pathways resulting in the formation of pentitols, any alditol with a chain of five carbon atoms in the molecule.
pentitol anabolism
pentitol biosynthesis
pentitol formation
pentitol synthesis
The chemical reactions and pathways resulting in the breakdown of pentitols, any alditol with a chain of five carbon atoms in the molecule.
pentitol breakdown
pentitol catabolism
pentitol degradation
The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.
taurine metabolism
Enables the transfer of oxalate from one side of a membrane to the other. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.
oxalic acid transporter activity
The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.
ethanedioate transport
ethanedioic acid transport
oxalic acid transport
The chemical reactions and pathways involving vibriobactin, the major siderophore produced by Vibrio cholerae.
vibriobactin metabolism
The chemical reactions and pathways involving a protein. Includes protein modification.
cellular protein metabolic process
cellular protein metabolism
multicellular organismal protein metabolic process
protein metabolic process and modification
protein metabolism
protein metabolism and modification
The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.
propanoate metabolic process
propanoate metabolism
propionate metabolism
The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid.
propionate breakdown
propionate catabolism
propionate degradation
The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.
glycerol breakdown
glycerol catabolism
glycerol degradation
The chemical reactions and pathways involving arabinose, arabino-pentose. L-Arabinose occurs both free, for example in the heartwood of many conifers, and in the combined state, as a constituent of plant hemicelluloses, bacterial polysaccharides etc. D-arabinose is a constituent of arabinonucleosides.
arabinose metabolism
The chemical reactions and pathways resulting in the formation of arabinose, arabino-pentose.
arabinose anabolism
arabinose biosynthesis
arabinose formation
arabinose synthesis
The chemical reactions and pathways resulting in the breakdown of arabinose, arabino-pentose.
arabinose breakdown
arabinose catabolism
arabinose degradation
The chemical reactions and pathways resulting in the breakdown of D-arabinose, the D-enantiomer of arabino-pentose.
D-arabinose breakdown
D-arabinose catabolism
D-arabinose degradation
The chemical reactions and pathways resulting in the breakdown of L-arabinose, the L-enantiomer of arabino-pentose.
L-arabinose breakdown
L-arabinose catabolism
L-arabinose degradation
The chemical reactions and pathways involving aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.
aldaric acid metabolism
The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.
aldaric acid anabolism
aldaric acid biosynthesis
aldaric acid formation
aldaric acid synthesis
The chemical reactions and pathways resulting in the breakdown of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.
aldaric acid breakdown
aldaric acid catabolism
aldaric acid degradation
The chemical reactions and pathways involving galactarate, an anion of galactaric acid, the meso-aldaric acid derived from both D- and L-galactose.
D-galactarate metabolic process
D-galactarate metabolism
galactarate metabolism
mucic acid metabolic process
mucic acid metabolism
The chemical reactions and pathways involving galactonate, the anion of galactonic acid, an organic acid derived from the sugar galactose.
galactonate metabolism
The chemical reactions and pathways resulting in the breakdown of galactonate, the anion of galactonic acid.
galactonate breakdown
galactonate catabolism
galactonate degradation
The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.
glucuronate metabolism
The chemical reactions and pathways involving galacturonate, the anion of galacturonic acid, the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.
galacturonate metabolism
The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol, yielding energy in the form of ATP.
glycerol fermentation
The chemical reactions and pathways involving mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.
mannitol metabolism
The chemical reactions and pathways resulting in the breakdown of non-phosphorylated forms of glucose.
non-phosphorylated glucose breakdown
non-phosphorylated glucose catabolism
non-phosphorylated glucose degradation
The chemical reactions and pathways resulting in the breakdown of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.
mandelate breakdown
mandelate catabolism
mandelate degradation
The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.
butanoic acid metabolic process
butanoic acid metabolism
butyrate metabolism
butyric acid metabolic process
butyric acid metabolism
The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.
nicotine breakdown
nicotine catabolism
nicotine degradation
The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.
3-hydroxyphenylacetate metabolism
3HPA metabolic process
3HPA metabolism
The chemical reactions and pathways involving 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.
4-toluenecarboxylate metabolism
p-toluate metabolic process
p-toluate metabolism
The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.
catechol breakdown
catechol catabolic process
catechol catabolism
catechol degradation
The chemical reactions and pathways resulting in the breakdown of 3,4-dihydroxybenzoate.
protocatechuate breakdown
protocatechuate catabolic process
protocatechuate catabolism
protocatechuate degradation
The chemical reactions and pathways resulting in the breakdown of a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.
short-chain fatty acid breakdown
short-chain fatty acid catabolism
short-chain fatty acid degradation
The chemical reactions and pathways involving urea, the water soluble compound O=C-(NH2)2.
urea metabolism
The chemical reactions and pathways involving quinate, the anion of quinic acid. The acid occurs commonly in plants, either free or as esters, and is used as a medicine.
quinate metabolism
quinic acid metabolic process
quinic acid metabolism
The chemical reactions and pathways involving shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. It is an important intermediate in the biosynthesis of aromatic amino acids.
shikimate metabolism
The chemical reactions and pathways involving phosphonates, any organic compounds containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Metabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.
organophosphonate metabolic process
phosphonate metabolism
The chemical reactions and pathways involving organophosphates, any phosphate-containing organic compound.
organophosphate metabolism
The chemical reactions and pathways involving 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.
6-endo-hydroxycineole metabolic process
6-endo-hydroxycineole metabolism
6-hydroxycineole metabolism
hydroxycineol metabolic process
hydroxycineol metabolism
A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.
NADH-O2 electron transport
succinate-O2 electron transport
ubiquinone-8-O2 electron transport
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose; it is converted into ethanol and carbon dioxide (CO2), producing two molecules of ATP for each molecule of glucose.
alcoholic fermentation
ethanol anabolism during fermentation
ethanol biosynthetic process involved in glucose fermentation to ethanol
ethanol fermentation
ethanol formation during fermentation
ethanol synthesis during fermentation
glucose catabolic process to ethanol
glucose fermentation to ethanol
The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, and possibly ethanol, yielding energy in the form of adenosine triphosphate (ATP).
glucose fermentation to lactate
lactate fermentation
The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, via canonical glycolysis, yielding energy in the form of adenosine triphosphate (ATP).
glucose fermentation to lactate via pyruvate
homofermentation
homofermentative lactate fermentation
homofermentative pathway
homolactate fermentation
homolactic fermentation
The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids, yielding energy in the form of ATP.
amino acid fermentation
The anaerobic chemical reactions and pathways resulting in the breakdown of a nitrogen-containing compound, yielding energy in the form of ATP.
nitrogenous compound catabolic process
The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, yielding energy in the form of ATP.
glutamate fermentation
The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.
GDP-mannose metabolism
The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.
NAD (oxidized) metabolic process
NAD (oxidized) metabolism
NAD metabolism
NAD phosphorylation and dephosphorylation
nicotinamide adenine dinucleotide metabolic process
nicotinamide adenine dinucleotide metabolism
oxidized NAD metabolic process
oxidized NAD metabolism
oxidized nicotinamide adenine dinucleotide metabolic process
oxidized nicotinamide adenine dinucleotide metabolism
The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment, glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen.
glutamate metabolic process via glutamine and ammonia
glutamate metabolism via glutamine and ammonia
The chemical reactions and pathways resulting in the breakdown of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; catabolism may be of either the oxidized form, NAD, or the reduced form, NADH.
NAD (oxidized) catabolic process
NAD (oxidized) catabolism
NAD (reduced) catabolic process
NAD (reduced) catabolism
NAD breakdown
NAD catabolism
NAD degradation
NADH catabolic process
NADH catabolism
nicotinamide adenine dinucleotide catabolic process
nicotinamide adenine dinucleotide catabolism
oxidized NAD catabolic process
oxidized NAD catabolism
oxidized nicotinamide adenine dinucleotide catabolic process
oxidized nicotinamide adenine dinucleotide catabolism
reduced NAD catabolic process
reduced NAD catabolism
reduced nicotinamide adenine dinucleotide catabolic process
reduced nicotinamide adenine dinucleotide catabolism
The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis.
glyceraldehyde 3-phosphate metabolic process
glyceraldehyde 3-phosphate metabolism
glyceraldehyde-3-phosphate metabolism
The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.
photolysis
The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.
deoxyribose phosphate metabolism
The chemical reactions and pathways involving ribose phosphate, any phosphorylated ribose sugar.
ribose phosphate metabolism