NothingMuch/GO-Terms huggingface dataset:
The part of the host cell cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
host cytosol
The volume enclosed by the membranes of the host cell endoplasmic reticulum.
host endoplasmic reticulum lumen
The lipid bilayer surrounding the host cell rough endoplasmic reticulum.
host rough endoplasmic reticulum membrane
The lipid bilayer surrounding the host cell smooth endoplasmic reticulum.
host smooth endoplasmic reticulum membrane
The lipid bilayer surrounding any of the compartments of the host cell ER-Golgi intermediate compartment system.
host cell ER-Golgi intermediate compartment membrane
host endoplasmic reticulum-Golgi intermediate compartment membrane
host ER-Golgi intermediate compartment membrane
Thin, stiff protrusion extended by the leading edge of a motile host cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward.
host filopodium
The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.
host Golgi membrane
The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.
envenomation resulting in hemolysis in another organism
envenomation resulting in hemolysis in other organism
hemolysis in other organism
hemolysis of cells in other organism
hemolysis of erythrocytes in other organism
hemolysis of RBCs in other organism
hemolysis of red blood cells in other organism
Any particle of coalesced lipids in the cytoplasm of a host cell. May include associated proteins.
host cell lipid adiposome
host cell lipid body
host cell lipid particle
Long, dynamic tubular channels, formed by invagination of the nuclear envelope, that extend deep into the nucleoplasm. The channels have an underlying lamina and are implicated in functioning in signaling and transport.
nuclear channels
Binding to a Rel Homology Domain (RHD) of a protein. The RHD is found in a family of eukaryotic transcription factors, which includes NF-kappaB, Dorsal, Relish and NFAT.
RHD binding
Binding to a TRAF-type zinc finger domain of a protein.
TRAF-type zinc finger domain binding
zinc finger TRAF-type domain binding
zinc-finger-TRAF domain binding
The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD+ or oxygen.
\'de novo\' UMP biosynthesis
Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.
UMP biosynthesis via nucleoside salvage pathway
UMP biosynthetic process via nucleoside salvage pathway
A ribonucleoprotein complex that contains aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator).
Met-tRNA/eIF2.GTP ternary complex
translation initiation (ternary) complex
The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from derivatives of it (either adenine, ADP or adenosine 3',5'-bisphosphate) without de novo synthesis.
adenosine monophosphate salvage
AMP biosynthetic process via salvage pathway
The chemical reactions and pathways resulting in the formation of cytidine 5'-triphosphate (CTP) from simpler components.
\'de novo\' cytidine 5\'-triphosphate biosynthetic process
Any process which produces cytidine 5'-triphosphate (CTP) from derivatives of it, without de novo synthesis.
CTP biosynthetic process via salvage pathway
cytidine 5\'-triphosphate salvage
The cell membrane of a secondary organism with which the first organism is interacting.
foreign membrane
other organism membrane
A region of an axon near a node of Ranvier that is between the paranode and internode regions.
juxta paranode axon
juxtaparanodal region
juxtaparanode
A cytoplasmic, membrane-bounded compartment found within Methanotrophic bacteria that contains enzymes and electron transfer proteins for methane catabolism. This structure is analogous to the thylakoid of Cyanobacteria and the anammoxosome of anaerobic ammonium oxidation organisms.
methane-oxidizing compartment
methanotroph intracytoplasmic membrane-bound compartment
A specialized area of membrane of the host axon terminal that faces the plasma membrane of the host neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many host synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane.
host cell pre-synaptic membrane
other organism pre-synaptic membrane
other organism presynaptic membrane
The slowing of metabolic processes to very low levels in order to conserve energy as a part of hibernation.
down regulation of metabolic activity during hibernation
down-regulation of metabolic activity during hibernation
downregulation of metabolic activity during hibernation
inhibition of metabolic activity during hibernation
negative regulation of metabolic activity during hibernation
The chemical reactions and pathways resulting in the breakdown into fatty acids and monoglycerides of lipids in the small intestine. Lipids are broken down by lipases released by the pancreas.
intestinal lipid breakdown
intestinal lipid catabolism
intestinal lipid degradation
A tubular structure of relatively uniform size that connects a mitochondrial crista to the mitochondrial inner boundary membrane.
crista junction
cristae junction
A cell-cell contact zone that consists of membrane invaginations extending from either cell, which contain tight-, gap-, and adherens junctions. Peg and socket contacts form between endothelial cells and pericytes, and between lens fiber cells.
ball and socket contact
Sites of close apposition of the inner and outer mitochondrial membrane.
bridge contact site
contact site
The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.
dendrite tuft
The axon of a dorsal root ganglion cell that are responsive to pain and temperature. C-fibers are small in diameter (0.2-1.5 um) and unmyelinated.
C-fibre
An axon arising from cerebellar projecting cells in the cochlea, vestibular nuclei, spinal cord, reticular formation, cerebellar nuclei and basilar pontine nuclei. Mossy fibers enter through all three cerebellar peduncles and send collaterals to the deep cerebellar nuclei, then branch in the white matter and terminate in the granule cell layer. Through this branching, a given mossy fiber can innervate several folia. Mossy fibers synapse on granule cells. The synaptic contacts are made at enlargements along the length of the mossy fiber called mossy fiber rosettes. The enlargements of the rosettes give the axons a mossy-looking appearance in Golgi stained preparations.
cerebellar mossy fibre
The axon of inferior olive neuron that projects to the cerebellar cortex, largely via the inferior cerebellar peduncle. They range in diameter from 1-3 um and are myelinated until they enter the granule cell layer. They give off collaterals to the deep cerebellar nuclei. They synapse extensively with the dendrites of Purkinje cells in the molecular layer, where each fiber branches repeatedly to climb along the Purkinje cell dendritic tree. Each Purkinje cell is innervated by only a single climbing fiber.
climbing fibre
Hippocampal mossy fiber produced by dentate gyrus granule cells.
dentate gyrus mossy fibre
granule cell axon
A dendrite arising from another dendrite.
dendrite branch
secondary dendrite
A spine that originates from the axon, usually from the initial segment.
axon spine
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.
protein K27-linked polyubiquitination
A specialized axon terminus which is produced by retinal cone cells. Pedicles are large, conical, flat end-feet (8-10 micrometers diameter) of the retinal cone axon that lie more or less side by side on the same plane at the outer edge of the outer plexiform layer (OPL).
cone pedicle
A specialized neuron projection which is the site of synaptic transmission produced by retinal rod cells. Rod spherules are small round enlargements of the axon (3-5 micrometers diameter) or even extensions of the cell body.
rod cell spherule
rod photoreceptor spherule
A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins.
ER quality control compartment
ER-derived quality control compartment
ERQC
Binding to a retinoic acid-responsive element, a variable direct repeat of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.
RARE binding
Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
ion channel binding
Distal part of the dendritic spine, that carries the post-synaptic density.
spine head
The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the negative regulation of apoptotic process.
canonical Wnt receptor signaling pathway involved in negative regulation of apoptosis
canonical Wnt receptor signaling pathway involved in negative regulation of apoptotic process
canonical Wnt receptor signalling pathway involved in negative regulation of apoptosis
The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of apoptotic process.
canonical Wnt receptor signaling pathway involved in positive regulation of apoptosis
canonical Wnt receptor signaling pathway involved in positive regulation of apoptotic process
canonical Wnt receptor signalling pathway involved in positive regulation of apoptosis
canonical Wnt-activated signaling pathway involved in positive regulation of apoptotic process
The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in mesenchymal stem cell differentiation.
canonical Wnt receptor signaling pathway involved in mesenchymal stem cell differentiation
canonical Wnt receptor signalling pathway involved in mesenchymal stem cell differentiation
canonical Wnt-activated signaling pathway involved in mesenchymal stem cell differentiation
The process of transferring information from a stromal cell to an epithelial cell where it is received and interpreted, as part of prostate gland development.
stromal-epithelial cell signalling involved in prostate gland development
An endocytosis process that results in the uptake of liquid material by cells from their external environment by invagination of the plasma membrane to form uncoated micropinosomes, differentiated from macropinosomes by their smaller size, on average 95 nm.
clathrin-independent pinocytosis
single-organism micropinocytosis
Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.
negative regulation of voltage-gated potassium channel activity in other organism
Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.
RNA polymerase II core promoter proximal region sequence-specific DNA binding, bending
RNA polymerase II promoter proximal region sequence-specific DNA binding, bending
RNA polymerase II proximal promoter region sequence-specific DNA binding, bending
RNA polymerase II proximal promoter sequence-specific DNA binding, bending
The activity of binding selectively and non-covalently to DNA in a sequence-independent manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.
DNA bending involving non-sequence-specific DNA binding
The directed movement of the hexose monosaccharide glucose into a cell as a result of an insulin stimulus.
cellular glucose import in response to insulin stimulus
The process by which a CLRC complex is transported to, or maintained in, heterochromatin. CLRC complex is an active cullin-dependent E3 ubiquitin ligase complex essential for heterochromatin assembly by RNAi and histone H3K9 methylation.
CLRC ubiquitin ligase complex localisation to heterochromatin
CLRC ubiquitin ligase complex localization to heterochromatin
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the swelling of soft tissues of the bitten organism as a result of excess water accumulation.
envenomation resulting in induction of edema in other organism
envenomation resulting in induction of oedema in other organism
The directed movement of DNA from an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
translocation of DNA into other organism during symbiotic interaction
translocation of DNA into other organism involved in symbiotic interaction
transport of DNA into host
transport of DNA into other organism during symbiotic interaction
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of blood coagulation in the bitten organism.
envenomation resulting in negative regulation of blood coagulation in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the aggregation, arrangement and bonding together of a set of components to form a pore complex in a membrane of the bitten organism.
envenomation resulting in pore formation in membrane of other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a high voltage-gated calcium channel in the bitten organism.
envenomation resulting in negative regulation of high voltage-gated calcium channel activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a low voltage-gated calcium channel in the bitten organism.
envenomation resulting in negative regulation of low voltage-gated calcium channel activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of platelet aggregation in the bitten organism.
envenomation resulting in negative regulation of platelet aggregation in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of platelet aggregation in the bitten organism.
envenomation resulting in positive regulation of platelet aggregation in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of blood mast cell degranulation in the bitten organism.
envenomation resulting in positive regulation of mast cell degranulation in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism which causes damage to the extracellular matrix of the blood vessels of the bitten organism, ultimately resulting in hemorrhage in the bitten organism.
envenomation resulting in blood vessel ECM, causing hemorrhagic damage in other organism
envenomation resulting in blood vessel extracellular matrix damage, causing hemorrhagic damage in other organism
The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinogenolysis, a process that degrades fibrinogen at a variety of Arg-Lys bonds, thus impairing fibrinogen clotting in the bloodstream of the bitten/stung organism.
envenomation resulting in fibrinogenolysis in other organism
The process in which an organism effects a change in the transmission of a nerve impulse in another organism.
modulation of conduction of nerve impulse in other organism
modulation of transmission of nerve impulse in other organism
regulation of transmission of nerve impulse in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the transmission of nerve impulses in the bitten organism.
envenomation resulting in modulation of conduction of nerve impulse in other organism
envenomation resulting in modulation of transmission of nerve impulse in other organism
Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.
negative regulation of voltage-gated sodium channel activity in other organism
Any process that activates or increases the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.
positive regulation of voltage-gated sodium channel activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated sodium channel in the bitten organism.
envenomation resulting in negative regulation of voltage-gated sodium channel activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation or increase in the activity of the activity of a voltage-gated sodium channel in the bitten organism.
envenomation resulting in positive regulation of voltage-gated sodium channel activity in other organism
A process by which one organism decreases the force with which blood travels through the circulatory system of another organism.
negative regulation of blood pressure in other organism
A process by which one organism increases the force with which blood travels through the circulatory system of another organism.
positive regulation of blood pressure in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant increase of the force with which blood travels through the circulatory system of the bitten/stung organism.
envenomation resulting in positive regulation of blood pressure in other organism
The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.
modulation of signal transduction in another organism
modulation of signal transduction in other organism
A process that activates or increases the frequency, rate or extent of the activity of a G protein-coupled receptor in a second organism.
positive regulation of G protein-coupled receptor activity in other organism
positive regulation of G-protein coupled receptor activity in other organism
The process in which an organism effects a change in the activity of a glucagon-like peptide receptor 1 in a second organism.
modulation of glucagon-like peptide receptor 1 activity in other organism
regulation of glucagon-like peptide receptor activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.
envenomation resulting in positive regulation of signal transduction in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of G protein-coupled receptor activity in of the bitten organism.
envenomation resulting in positive regulation of G protein-coupled receptor activity in other organism
envenomation resulting in positive regulation of G-protein coupled receptor activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of glucagon-like peptide receptor 1 activity in of the bitten organism.
envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in other organism
The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.
modulation of vasoactive intestinal polypeptide receptor activity in other organism
modulation of VIP receptor activity in other organism
regulation of vasoactive intestinal polypeptide receptor activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.
envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism
envenomation resulting in positive regulation of VIP receptor activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, killing heart myocytes and ultimately resulting in muscle damage in the bitten organism.
envenomation resulting in myocyte killing causing muscle damage in other organism
envenomation resulting in myocyte killing in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, damaging the extracellular matrix of muscle cells and ultimately resulting in muscle necrosis in the bitten organism.
envenomation resulting in damage of muscle extracellular matrix causing muscle necrosis in other organism
envenomation resulting in damage of muscle extracellular matrix in other organism
Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.
supraspliceosome complex
Any process in which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death by apoptosis in a second organism.
positive regulation of apoptotic process in other organism