NothingMuch/GO-Terms huggingface dataset:
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.
positive regulation of penicillin breakdown
positive regulation of penicillin catabolism
positive regulation of penicillin degradation
A protein complex that contains four related proteins that have been implicated in several membrane-related processes, such as sorting of H+-translocating ATPases, endocytosis, ER-Golgi trafficking, vacuole fusion, vacuolar polyphosphate homeostasis and the microautophagic scission of vesicles into the vacuolar lumen. The complex is enriched at the vacuolar membrane, but also found in other cellular compartments, including the ER and the cell periphery. In Saccharomyces, the subunits are Vtc1p, Vtc2p, Vtc3p and Vtc4p.
VTC complex
A protein complex that possesses histone acetyltransferase activity and links histone acetylation to the assembly of transcriptionally silent chromatin. In vitro, the complex acetylates lysine 16 of histone H4 and lysine 14 of histone H3, although the latter may not be relevant in vivo. The complex contains a catalytic subunit and at least two other subunits; in Saccharomyces, the catalytic subunit is Sas2p and additional subunits are Sas4p and Sas5p.
SAS-I complex
A protein complex containing one Bcl protein and one or more copies of NF-kappaB2; formation of complexes of different stoichiometry depends on the Bcl3:NF-kappaB2 ratio, and allow Bcl3 to exert different regulatory effects on NF-kappaB2-dependent transcription.
Bcl3-NFKB2 complex
Bcl3-p52 complex
The process in which new strands of DNA are synthesized in a plastid.
plastid DNA synthesis
replication of plastid DNA
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of choline across a membrane.
ABC-type choline transmembrane transporter activity
ATP-dependent choline transmembrane transporter activity
ATPase-coupled choline transmembrane transporter activity
choline-transporting ATPase activity
An axon part that is a gap in the myelin where voltage-gated sodium channels cluster and saltatory conduction is executed.
node of Ranvier axon
An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath.
internode
An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath.
paranode
The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
phytate transport
A complex of three proteins integral to the cytoplasmic membrane of bacteria and membranes of organelles derived from bacteria (chloroplasts and mitochondria) involved in membrane transport of folded proteins.
TAT protein secretion complex
TAT protein translocation system complex
Twin-arginine translocation complex
A heterodimeric protein complex of protein C inhibitor (SERPINA5) and acrosin; formation of the complex inhibits the protease activity of acrosin.
PCI-ACR complex
PCI-acrosin complex
plasma serine protease inhibitor-acrosin complex
serpin A5-acrosin complex
SERPINA5-acrosin complex
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ectoine(out/in) = ADP + phosphate + ectoine(in/out).
ATP-dependent ectoine transmembrane transporter activity
ectoine transmembrane transporter activity
ectoine-transporting ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + hydroxyectoine(out/in) = ADP + phosphate + hydroxyectoine(in/out).
ATP-dependent hydroxyectoine transmembrane transporter activity
hydroxyectoine transmembrane transporter activity
hydroxyectoine-transporting ATPase activity
The protein-ribosome-tRNA complex that has just recognized the start codon of a capped mRNA. It is composed of the small ribosomal subunit, eukaryote initiation factors (eIF) eIF3 complex, eIF1, eIF1A, eIF2-GDP, eIF4 complex and initiatior-methionine-tRNA. Recognition of the start codon triggers downstream steps in the pathway, including eIF1 dissociation; Pi release from eIF2; and conversion to the closed, scanning-arrested conformation of the PIC.
eukaryotic 48S initiation complex
eukaryotic 48S pre-initiation complex
A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.
T-tubule organisation
T-tubule organization and biogenesis
transverse tubule organization
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a contractile vacuole. A specialized vacuole that fills with water from the cytoplasm and then discharges this externally by the opening of contractile vacuole pores.
contractile vacuole organisation
contractile vacuole organization and biogenesis
Enables the transfer of dehydroascorbate, 5-(1,2-dihydroxyethyl)furan-2,3,4(5H)-trione, from one side of a membrane to the other.
dehydroascorbate transporter activity
dehydroascorbic acid transporter activity
The chemical reactions and pathways leading to the formation of O-glucosylated derivatives of quercetin.
quercetin O-glucoside anabolism
quercetin O-glucoside biosynthesis
quercetin O-glucoside formation
quercetin O-glucoside synthesit
A process that generates phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol, from derivatives of it without de novo synthesis.
phytol salvage pathway
The directed movement of hydroxyectoine across a membrane by means of some agent such as a transporter or a pore.
hydroxyectoine transport
A protein complex that binds to the Swi4/6 cell cycle box (SCB) promoter element, consensus sequence CRCGAAA, and activates transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Swi4p and the activator Swi6p, and is associated with additional proteins known as Whi5p and Msa1p.
SBF complex
The chemical reactions and pathways leading to the breakdown of chlorophyll a.
chlorophyll a breakdown
chlorophyll a catabolism
chlorophyll a degradation
The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate phytyl diphosphate.
chlorophyll a anabolism via phytyl diphosphate
chlorophyll a biosynthesis via phytyl diphosphate
chlorophyll a biosynthetic process via phytyl-PP
chlorophyll a formation via phytyl chlorophyll a formation via phytyl-PP
chlorophyll a synthesis via phytyl diphosphate
The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate geranylgeranyl-chlorophyll a.
chlorophyll a anabolism via geranylgeranyl-chlorophyll a
chlorophyll a biosynthesis via geranylgeranyl-chlorophyll a
chlorophyll a formation via geranylgeranyl-chlorophyll a
chlorophyll a synthesis via geranylgeranyl-chlorophyll a
A signal transduction process that contributes to a mitotic DNA replication checkpoint.
mitotic cell cycle DNA replication checkpoint
mitotic DNA replication checkpoint
S-M checkpoint
S-M DNA replication checkpoint
S-phase checkpoint
signal transduction involved in mitotic DNA replication checkpoint
signal transduction involved in mitotic G2/M transition decatenation checkpoint
signal transduction involved in S-M checkpoint
A signal transduction process that controls the G2/M1 transition of the meiotic cell cycle and prevents the initiation of nuclear division until DNA replication is complete.
meiotic cell cycle DNA replication checkpoint
meiotic G2/MI DNA replication checkpoint
signal transduction involved in meiotic DNA replication checkpoint
The chemical reactions and pathways resulting in the formation of UDP-D-xylose, uridinediphosphoxylose, a substance composed of xylose in glycosidic linkage with uridine diphosphate.
UDP-D-xylose anabolism
UDP-D-xylose biosynthesis
UDP-D-xylose formation
UDP-D-xylose synthesis
The chemical reactions and pathways resulting in the formation of homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.
homomethionine anabolism
homomethionine biosynthesis
homomethionine formation
homomethionine synthesis
The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate CDP-choline.
choline anabolism via CDP-choline
choline biosynthesis via CDP-choline
choline formation via CDP-choline
choline synthesis via CDP-choline
The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate N-monomethylethanolamine.
choline anabolism via N-monomethylethanolamine
choline biosynthesis via N-monomethylethanolamine
choline formation via N-monomethylethanolamine
choline synthesis via N-monomethylethanolamine
The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate phosphoryl-ethanolamine.
choline anabolism via phosphoryl-ethanolamine
choline biosynthesis via phosphoryl-ethanolamine
choline formation via phosphoryl-ethanolamine
choline synthesis via phosphoryl-ethanolamine
The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces.
CSF secretion
The chemical reactions and pathways leading to the formation of O-glucosylated derivatives of kaempferol.
kaempferol O-glucoside anabolism
kaempferol O-glucoside biosynthesis
kaempferol O-glucoside formation
kaempferol O-glucoside synthesit
The chemical reactions and pathways resulting in the formation of ent-kaurene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.
ent-kaurene anabolism
ent-kaurene biosynthesis
ent-kaurene formation
ent-kaurene synthesis
Any process that stops, prevents, or reduces the frequency, rate or extent of collagen binding.
down regulation of collagen binding
down-regulation of collagen binding
downregulation of collagen binding
inhibition of collagen binding
Any process that activates or increases the frequency, rate or extent of collagen binding.
activation of collagen binding
stimulation of collagen binding
up regulation of collagen binding
up-regulation of collagen binding
upregulation of collagen binding
The chemical reactions and pathways resulting in the formation of apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.
apiose anabolism
apiose biosynthesis
apiose formation
apiose synthesis
The chemical reactions and pathways resulting in the formation of UDP-D-apiose, uridinediphosphoapicose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.
UDP-D-apiose anabolism
UDP-D-apiose biosynthesis
UDP-D-apiose formation
UDP-D-apiose synthesis
A cyclic series of interconversions involving L-ascorbate and glutathione that scavenges hydrogen peroxide and reduces it to water, with concomitant oxidation of NADPH.
hydrogen peroxide detoxification
The chemical reactions and pathways resulting in the formation of L-arabinose, arabino-pentose.
L-arabinose anabolism
L-arabinose biosynthesis
L-arabinose formation
L-arabinose synthesis
The chemical reactions and pathways resulting in the formation of UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.
UDP-L-arabinose anabolism
UDP-L-arabinose biosynthesis
UDP-L-arabinose formation
UDP-L-arabinose synthesis
The chemical reactions and pathways resulting in the formation of lysine, via the intermediates diaminopimelate and N-succinyl-2-amino-6-ketopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in four enzymatic steps.
lysine anabolism via diaminopimelate and N-succinyl-2-amino-6-ketopimelate
lysine biosynthesis via diaminopimelic acid and N-succinyl-2-amino-6-ketopimelate
lysine biosynthetic process via diaminopimelic acid and N-succinyl-2-amino-6-ketopimelate
lysine formation via diaminopimelate and N-succinyl-2-amino-6-ketopimelate
lysine synthesis via diaminopimelate and N-succinyl-2-amino-6-ketopimelate
The chemical reactions and pathways resulting in the formation of lysine, via the intermediates diaminopimelate and L-2-acetamido-6-oxoheptanedioate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in four enzymatic steps.
lysine anabolism via diaminopimelate and L-2-acetamido-6-oxoheptanedioate
lysine biosynthesis via diaminopimelic acid and L-2-acetamido-6-oxoheptanedioate
lysine biosynthetic process via diaminopimelic acid and L-2-acetamido-6-oxoheptanedioate
lysine formation via diaminopimelate and L-2-acetamido-6-oxoheptanedioate
lysine synthesis via diaminopimelate and L-2-acetamido-6-oxoheptanedioate
The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in a single enzymatic step.
lysine anabolism via diaminopimelate, dehydrogenase pathway
lysine biosynthesis via diaminopimelic acid, dehydrogenase pathway
lysine formation via diaminopimelate, dehydrogenase pathway
lysine synthesis via diaminopimelate, dehydrogenase pathway
The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in two enzymatic steps.
lysine anabolism via diaminopimelate, diaminopimelate-aminotransferase pathway
lysine biosynthesis via diaminopimelate, diaminopimelate-aminotransferase pathway
lysine formation via diaminopimelate, diaminopimelate-aminotransferase pathway
lysine synthesis via diaminopimelate, diaminopimelate-aminotransferase pathway
The directed movement of a protease to a location within a secretory granule in a mast cell.
establishment of protease localisation in mast cell secretory granule
establishment of protease localization in mast cell secretory granule
A process in which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere.
maintenance of protease localization in mast cell secretory granule
mast cell protease retention
The directed movement of the protease granzyme B to a location within a secretory granule in a T cell.
establishment of granzyme B localisation in T cell secretory granule
establishment of granzyme B localization in T cell secretory granule
establishment of granzyme B localization in T lymphocyte secretory granule
establishment of granzyme B localization in T-cell secretory granule
establishment of granzyme B localization in T-lymphocyte secretory granule
T-lymphocyte secretory granule storage of granzyme B
A process in which the protease granyme B is maintained in a secretory granule in a T cell and prevented from moving elsewhere.
maintenance of granzyme B localization in T cell secretory granule
maintenance of granzyme B localization in T lymphocyte secretory granule
maintenance of granzyme B localization in T-cell secretory granule
maintenance of granzyme B localization in T-lymphocyte secretory granule
The chemical reactions and pathways resulting in the formation of geranyl diphosphate.
geranyl diphosphate anabolism
geranyl diphosphate biosynthesis
geranyl diphosphate formation
geranyl diphosphate synthesis
geranyldiphosphate biosynthetic process
The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.
geranylgeranyl diphosphate anabolism
geranylgeranyl diphosphate biosynthesis
geranylgeranyl diphosphate formation
geranylgeranyl diphosphate synthesis
The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.
putrescine anabolism from ornithine
putrescine biosynthesis from ornithine
putrescine formation from ornithine
putrescine synthesis from ornithine
The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine; in this pathway, arginine is converted to agmatine, and agmatine is converted to putrescine in a single enzymatic step.
putrescine anabolism from arginine, using agmatinase
putrescine biosynthesis from arginine, using agmatinase
putrescine formation from arginine, using agmatinase
putrescine synthesis from arginine, using agmatinase
The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine, via the intermediate N-carbamoylputrescine; in this pathway, arginine is converted to agmatine, and agmatine is converted to putrescine in two single enzymatic steps.
putrescine anabolism from arginine via N-carbamoylputrescine
putrescine biosynthesis from arginine via N-carbamoylputrescine
putrescine formation from arginine via N-carbamoylputrescine
putrescine synthesis from arginine via N-carbamoylputrescine
The chemical reactions and pathways resulting in the breakdown of homogalacturonan, a pectidic polymer, characterized by a backbone of 1,4-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.
homogalacturonan breakdown
homogalacturonan catabolism
homogalacturonan degradation
The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 1,3 diaminopropane.
beta-alanine anabolism via 1,3 diaminopropane
beta-alanine biosynthesis via 1,3 diaminopropane
beta-alanine formation via 1,3 diaminopropane
beta-alanine synthesis via 1,3 diaminopropane
The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 3-hydroxypropionate.
beta-alanine anabolism via 3-hydroxypropionate
beta-alanine biosynthesis via 3-hydroxypropionate
beta-alanine formation via 3-hydroxypropionate
beta-alanine synthesis via 3-hydroxypropionate
The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 3-ureidopropionate.
beta-alanine anabolism via 3-ureidopropionate
beta-alanine formation via 3-ureidopropionate
beta-alanine synthesis via 3-ureidopropionate
A triplet codon-amino acid adaptor activity that recognizes a UUU codon.
phenylalanine tRNA
TTT codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UUC codon.
phenylalanine tRNA
TTC codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UUA codon.
leucine tRNA
TTA codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UUG codon.
leucine tRNA
TTG codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UCU codon.
serine tRNA
TCT codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UCC codon.
serine tRNA
TCC codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UCA codon.
serine tRNA
TCA codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UCG codon.
serine tRNA
TCG codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UAU codon.
TAT codon-amino acid adaptor activity
tyrosine tRNA
A triplet codon-amino acid adaptor activity that recognizes a UAC codon.
TAC codon-amino acid adaptor activity
tyrosine tRNA
A triplet codon-amino acid adaptor activity that recognizes a UAA codon.
TAA codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UAG codon.
TAG codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UGU codon.
cysteine tRNA
TGT codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UGC codon.
cysteine tRNA
TGC codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UGA codon.
TGA codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a UGG codon.
TGG codon-amino acid adaptor activity
tryptophan tRNA
A triplet codon-amino acid adaptor activity that recognizes a CUU codon.
CTT codon-amino acid adaptor activity
leucine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CUC codon.
CTC codon-amino acid adaptor activity
leucine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CUA codon.
CTA codon-amino acid adaptor activity
leucine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CUG codon.
CTG codon-amino acid adaptor activity
leucine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CCU codon.
CCT codon-amino acid adaptor activity
proline tRNA
A triplet codon-amino acid adaptor activity that recognizes a CCC codon.
proline tRNA
A triplet codon-amino acid adaptor activity that recognizes a CCA codon.
proline tRNA
A triplet codon-amino acid adaptor activity that recognizes a CCG codon.
proline tRNA
A triplet codon-amino acid adaptor activity that recognizes a CAU codon.
CAT codon-amino acid adaptor activity
histidine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CAC codon.
histidine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CAA codon.
glutamine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CAG codon.
glutamine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CGU codon.
arginine tRNA
CGT codon-amino acid adaptor activity
A triplet codon-amino acid adaptor activity that recognizes a CGC codon.
arginine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CGA codon.
arginine tRNA
A triplet codon-amino acid adaptor activity that recognizes a CGG codon.
arginine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AUU codon.
ATT codon-amino acid adaptor activity
isoleucine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AUC codon.
ATC codon-amino acid adaptor activity
isoleucine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AUA codon.
ATA codon-amino acid adaptor activity
isoleucine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AUG codon.
ATG codon-amino acid adaptor activity
initiator methionine tRNA
methionine tRNA
A triplet codon-amino acid adaptor activity that recognizes an ACU codon.
ACT codon-amino acid adaptor activity
threonine tRNA
A triplet codon-amino acid adaptor activity that recognizes an ACC codon.
threonine tRNA
A triplet codon-amino acid adaptor activity that recognizes an ACA codon.
threonine tRNA
A triplet codon-amino acid adaptor activity that recognizes an ACG codon.
threonine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AAU codon.
AAT codon-amino acid adaptor activity
asparagine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AAC codon.
asparagine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AAA codon.
lysine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AAG codon.
lysine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AGU codon.
AGT codon-amino acid adaptor activity
serine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AGC codon.
serine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AGA codon.
arginine tRNA
A triplet codon-amino acid adaptor activity that recognizes an AGG codon.
arginine tRNA
A triplet codon-amino acid adaptor activity that recognizes a GUU codon.
GTT codon-amino acid adaptor activity
valine tRNA
A triplet codon-amino acid adaptor activity that recognizes a GUC codon.
GTC codon-amino acid adaptor activity
valine tRNA
A triplet codon-amino acid adaptor activity that recognizes a GUA codon.
GTA codon-amino acid adaptor activity
valine tRNA
A triplet codon-amino acid adaptor activity that recognizes a GUG codon.
GTG codon-amino acid adaptor activity
valine tRNA