NothingMuch/GO-Terms huggingface dataset:
The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate UDP-galactose.
lactose breakdown via UDP-galactose
lactose degradation via UDP-galactose
The chemical reactions and pathways resulting in the breakdown of L- threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound methylglyoxal, which is subsequently converted to D-lactate.
L-threonine breakdown to D-lactate
L-threonine catabolic process to (R)-lactate
L-threonine catabolic process to methylglyoxal
L-threonine catabolic process to pyruvate
L-threonine catabolism to D-lactate
L-threonine degradation to D-lactate
threonine catabolic process to D-lactate
The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form to form 2-amino-3-oxobutanoate, which is subsequently converted to glycine.
L-threonine breakdown to glycine
L-threonine catabolic process to pyruvate
L-threonine catabolism to glycine
L-threonine degradation to glycine
threonine catabolic process to glycine
The chemical reactions and pathways resulting in the breakdown of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.
keto-D-gluconate breakdown
keto-D-gluconate catabolism
keto-D-gluconate degradation
The chemical reactions and pathways resulting in the breakdown of D-arabitol to form xylulose 5-phosphate. D-arabitol is converted into D-xylulose, which is then phosphorylated to form D-xylulose-5-phosphate.
D-arabitol breakdown to xylulose 5-phosphate
D-arabitol degradation
D-arabitol degradation to xylulose 5-phosphate
D-arabitol utilization
The chemical reactions and pathways resulting in the breakdown of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.
taurine breakdown
taurine catabolism
taurine degradation
The chemical reactions and pathways resulting in the formation of vibriobactin, the major siderophore produced by Vibrio cholerae.
vibriobactin anabolism
vibriobactin biosynthesis
vibriobactin biosynthetic process, peptide formation
vibriobactin biosynthetic process, peptide modification
vibriobactin formation
vibriobactin synthesis
The chemical reactions and pathways resulting in the formation of propionate, the anion derived from propionic acid.
propionate anabolism
propionate biosynthesis
propionate formation
propionate synthesis
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including glutamate.
arginine breakdown to glutamate
arginine degradation to glutamate
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including succinate.
arginine breakdown to succinate
arginine degradation to succinate
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.
arginine breakdown to ornithine
arginine degradation to ornithine
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.
arginine breakdown to spermine
arginine degradation to spermine
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate.
glutamate breakdown to aspartate
glutamate degradation to aspartate
The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-hydroxyglutarate, yielding energy in the form of ATP.
glutamate fermentation via 2-hydroxyglutarate
The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate L-citramalate.
glutamate breakdown via L-citramalate
glutamate degradation via L-citramalate
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including oxaloacetate.
glutamate breakdown to oxaloacetate
glutamate degradation to oxaloacetate
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including ornithine.
glutamate breakdown to ornithine
glutamate degradation to ornithine
The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formamide.
histidine breakdown to glutamate and formamide
histidine catabolic process to glutamate and formamide
histidine degradation to glutamate and formamide
The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formate.
histidine breakdown to glutamate and formate
histidine catabolic process to glutamate and formate
histidine degradation to glutamate and formate
The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including 2-oxoglutarate.
histidine breakdown to 2-oxoglutarate
histidine catabolic process to 2-ketoglutarate
histidine catabolic process to 2-oxoglutarate
histidine catabolic process to alpha-ketoglutarate
histidine catabolic process to alpha-oxoglutarate
histidine catabolism to 2-ketoglutarate
histidine catabolism to alpha-ketoglutarate
histidine catabolism to alpha-oxoglutarate
histidine degradation to 2-oxoglutarate
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including imidazol-5-yl-lactate.
histidine breakdown to imidazol-5-yl-lactate
histidine degradation to imidazol-5-yl-lactate
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including hydantoin-5-propionate.
histidine breakdown to hydantoin-5-propionate
histidine degradation to hydantoin-5-propionate
The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.
aerobic glycerol breakdown
aerobic glycerol catabolism
aerobic glycerol degradation
aerobic glycerol fermentation
The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including xylulose 5-phosphate.
L-arabinose breakdown to xylulose 5-phosphate
L-arabinose degradation to xylulose 5-phosphate
The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including 2-oxoglutarate.
L-arabinose breakdown to 2-oxoglutarate
L-arabinose catabolic process to 2-ketoglutarate
L-arabinose catabolic process to alpha-ketoglutarate
L-arabinose catabolic process to alpha-oxoglutarate
L-arabinose catabolism to 2-ketoglutarate
L-arabinose catabolism to alpha-ketoglutarate
L-arabinose catabolism to alpha-oxoglutarate
L-arabinose degradation to 2-oxoglutarate
The chemical reactions and pathways resulting in the breakdown of D-arabinose to form xylulose 5-phosphate. D-arabinose is converted into D-ribulose, which is phosphorylated to ribulose-5-phosphate, which is isomerized to give D-xylulose-5-phosphate.
D-arabinose breakdown to xylulose 5-phosphate
D-arabinose degradation to xylulose 5-phosphate
The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds via the conversion of sucrose to 3'-ketosucrose. 3'-ketosucrose is hydrolyzed to 3-ketoglucose and fructose, and the 3-ketoglucose is then be converted to glucose.
sucrose breakdown, using glucoside 3-dehydrogenase
sucrose catabolic process to D-glucose
sucrose catabolic process, using glucoside 3-dehydrogenase
sucrose catabolism, using glucoside 3-dehydrogenase
sucrose degradation, using glucoside 3-dehydrogenase
The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the presence of oxygen.
aerobic fructose breakdown
aerobic fructose catabolism
aerobic fructose degradation
The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.
glycerol fermentation to 1,3-propanediol
glycerol fermentation to propane-1,3-diol
The chemical reactions and pathways resulting in the breakdown of L-arabitol to form xylulose 5-phosphate. L-arabitol is converted into L-xylulose, which is then phosphorylated to L-xylulose-5-phosphate. This is converted to D-xylulose-5-phosphate via the intermediate L-ribulose-5-phosphate.
L-arabitol and xylitol degradation
L-arabitol breakdown to xylulose 5-phosphate
L-arabitol degradation to xylulose 5-phosphate
L-arabitol utilization
The chemical reactions and pathways resulting in the breakdown of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.
mannitol breakdown
mannitol catabolism
mannitol degradation
The chemical reactions and pathways resulting in the formation of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.
mannitol anabolism
mannitol biosynthesis
mannitol formation
mannitol synthesis
The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including benzoate.
(R)-mandelate breakdown to benzoate
(R)-mandelate degradation to benzoate
The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including catechol.
(R)-mandelate breakdown to catechol
(R)-mandelate degradation to catechol
The chemical reactions and pathways resulting in the breakdown of (R)-4-hydroxymandelate, the anion of (R)-4-hydroxymandelic acid.
(R)-4-hydroxymandelate breakdown
(R)-4-hydroxymandelate catabolism
(R)-4-hydroxymandelate degradation
The chemical reactions and pathways resulting in the breakdown of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.
2-oxobutyrate breakdown
2-oxobutyrate catabolism
2-oxobutyrate degradation
alpha-ketobutyrate catabolic process
alpha-ketobutyrate catabolism
The chemical reactions and pathways resulting in the breakdown of phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.
phenylethylamine breakdown
phenylethylamine catabolism
phenylethylamine degradation
The chemical reactions and pathways resulting in the breakdown of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.
3-hydroxyphenylacetate breakdown
3-hydroxyphenylacetate catabolism
3-hydroxyphenylacetate degradation
The chemical reactions and pathways resulting in the breakdown of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.
4-toluenecarboxylate breakdown
4-toluenecarboxylate catabolism
4-toluenecarboxylate degradation
p-toluate catabolic process
p-toluate catabolism
The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.
catechol breakdown, ortho-cleavage
catechol degradation, ortho-cleavage
The chemical reactions and pathways resulting in the breakdown of catechol via the meta-cleavage pathway, in which the catechol aromatic ring is broken between a hydroxylated carbon atom and an adjacent unsubstituted carbon atom.
catechol breakdown, meta-cleavage
catechol degradation, meta-cleavage
The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield oxaloacetate and pyruvate.
3,4-dihydroxybenzoate catabolic process, meta-cleavage
protocatechuate breakdown, meta-cleavage
protocatechuate catabolic process to oxaloacetate and pyruvate
protocatechuate degradation, meta-cleavage
The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield beta-ketoadipate.
3,4-dihydroxybenzoate catabolic process, ortho-cleavage
protocatechuate breakdown, ortho-cleavage
protocatechuate catabolic process to beta-ketoadipate
protocatechuate degradation, ortho-cleavage
The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid) that occur in the presence of oxygen.
aerobic benzoate metabolism
The chemical reactions and pathways resulting in the breakdown of creatinine into other compounds, including formate.
creatinine breakdown to formate
creatinine degradation to formate
The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.
3-(3-hydroxy)phenylpropionate breakdown
3-(3-hydroxy)phenylpropionate catabolism
3-(3-hydroxy)phenylpropionate degradation
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into urea.
atrazine breakdown to urea
atrazine degradation to urea
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into isopropylamine.
atrazine breakdown to isopropylamine
atrazine degradation to isopropylamine
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into cyanuric acid.
atrazine breakdown to cyanuric acid
atrazine degradation to cyanuric acid
The chemical reactions and pathways resulting in the breakdown of urate, the anion of uric acid, 2,6,8-trioxypurine.
urate breakdown
urate catabolism
urate degradation
uric acid catabolic process
The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.
propionate breakdown, 2-methylcitrate cycle
propionate degradation, 2-methylcitrate cycle
The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.
quinate breakdown
quinate catabolism
quinate degradation
quinic acid catabolic process
quinic acid catabolism
The chemical reactions and pathways resulting in the breakdown of shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid.
shikimate breakdown
shikimate catabolism
shikimate degradation
The chemical reactions and pathways resulting in the breakdown of 2-aminoethylphosphonate, also known as ciliatine.
2-aminoethylphosphonate breakdown
2-aminoethylphosphonate catabolism
2-aminoethylphosphonate degradation
2-phosphonoethylamine catabolic process
2-phosphonoethylamine catabolism
ciliatine catabolic process
ciliatine catabolism
The chemical reactions and pathways involving phosphonoacetate, C2H4PO5, a substance composed of an acetate and a phosphonic acid residue.
phosphonoacetate metabolism
The chemical reactions and pathways resulting in the breakdown of 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.
6-endo-hydroxycineole catabolic process
6-endo-hydroxycineole catabolism
6-hydroxycineole breakdown
6-hydroxycineole catabolism
6-hydroxycineole degradation
hydroxycineol catabolic process
hydroxycineol catabolism
The chemical reactions and pathways resulting in the breakdown of D-glucuronate into D-xylulose 5-phosphate.
glucuronate breakdown to xylulose 5-phosphate
glucuronate catabolic process to xylulose 5-phosphate
glucuronate degradation to xylulose 5-phosphate
A pathway leading to the fixation of two molecules of CO2 and the production of one molecule of acetyl-CoA; essentially the oxidative TCA cycle running in reverse. Acetyl-CoA is reductively carboxylated to pyruvate, from which all other central metabolites can be formed. Most of the enzymes of reductive and oxidative TCA cycle are shared, with the exception of three key enzymes that allow the cycle to run in reverse: ATP citrate lyase, 2-oxoglutarate:ferredoxin oxidoreductase, and fumarate reductase. 2-oxoglutarate:ferredoxin oxidoreductase catalyzes the carboxylation of succinyl-CoA to 2-oxoglutarate, ATP citrate lyase the ATP-dependent cleavage of citrate to acetyl-CoA and oxaloacetate, and fumarate reductase the reduction of fumarate forming succinate.
reductive carboxylate cycle
reductive carboxylic acid cycle
reductive citric acid pathway
reductive Kreb\'s cycle
reductive TCA cycle
The pathway in which formaldehyde is used as a carbon source in the ribulose monophosphate cycle. Methanotrophic bacteria produce formaldehyde from the oxidation of methane and methanol, and then assimilate it via the ribulose monophosphate cycle to form intermediates of the central metabolic routes that are subsequently used for biosynthesis of cell material. Three molecules of formaldehyde are assimilated, forming a three-carbon intermediate of central metabolism; in this pathway, all cellular carbon is assimilated at the oxidation level of formaldehyde.
formaldehyde assimilation via RuMP cycle
ribulose monophosphate cycle
The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.
formaldehyde assimilation via xylulose-5-phosphate cycle
formaldehyde fixation cycle
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into butanediol; effected by some members of the Enterobacteriaceae, e.g. Enterobacter, Erwinia, Klebsiella, and Serratia.
butanediol fermentation
glucose catabolic process to butanediol
glucose fermentation to butanediol
The anaerobic chemical reactions and pathways resulting in the breakdown of citrate to diacetyl, yielding energy in the form of ATP.
citrate fermentation to diacetyl
diacetyl fermentation
The anaerobic enzymatic conversion of lactate to propionate, concomitant with the oxidation of lactate to acetate and CO2 and yielding energy in the form of adenosine triphosphate (ATP).
acrylate pathway
nonrandomizing pathway
propionate fermentation
The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.
anaerobic purine base catabolic process
anaerobic purine base catabolism
anaerobic purine catabolic process
purine base fermentation
purine fermentation
The anaerobic chemical reactions and pathways resulting in the enzymatic breakdown of D-glucose to D-lactate and ethanol, yielding energy in the form of adenosine triphosphate (ATP) at the rate of one ATP per glucose molecule.
glucose fermentation to D-lactate and ethanol
heterofermentation
heterofermentative lactate fermentation
heterofermentative pathway
heterolactate fermentation
heterolactic fermentation
Glycolytic fermentation resulting in the catabolism of glucose to propionate, yielding energy in the form of ATP; an alternative to the acrylate pathway to produce propionate.
succinate-propionate fermentation
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose to lactate and acetate, yielding energy in the form of ATP.
bifidum pathway
glucose catabolic process to lactate and acetate
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into ethanol, lactate, formate, succinate, and acetate, yielding energy in the form of ATP.
glucose catabolic process to mixed acids
glucose fermentation to mixed acids
The anaerobic chemical reactions and pathways resulting in the breakdown of L-alanine, yielding energy in the form of ATP.
L-alanine fermentation
The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids; in these reactions, one amino acid is oxidised (acts as an electron donor) and a different amino acid is reduced (acts as an electron acceptor); oxidation of the electron-donating amino acid yields energy in the form of ATP.
cofermentation of pairs of amino acids
Stickland reaction
The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.
glycine fermentation
The chemical reactions and pathways involving propionate that occur in the methylmalonyl pathway.
propionate metabolism, methylmalonyl pathway
The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.
propionate metabolism, methylcitrate cycle
The chemical reactions and pathways resulting in the formation of L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA.
L-methylmalonyl-CoA anabolism
L-methylmalonyl-CoA biosynthesis
L-methylmalonyl-CoA formation
L-methylmalonyl-CoA synthesis
The pathways by which acetyl-CoA is processed and converted into alpha-ketoglutarate (2-oxoglutarate); methanogenic archaea use these pathways to assimilate acetyl-CoA into the cell.
acetyl-CoA catabolic process to 2-ketoglutarate
acetyl-CoA catabolic process to 2-oxoglutarate
acetyl-CoA catabolic process to alpha-ketoglutarate
acetyl-CoA catabolic process to alpha-oxoglutarate
acetyl-CoA catabolism to 2-ketoglutarate
acetyl-CoA catabolism to 2-oxoglutarate
acetyl-CoA catabolism to alpha-ketoglutarate
acetyl-CoA catabolism to alpha-oxoglutarate
The chemical reactions and pathways resulting in the breakdown of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.
glyceraldehyde 3-phosphate catabolic process
glyceraldehyde 3-phosphate catabolism
glyceraldehyde-3-phosphate breakdown
glyceraldehyde-3-phosphate catabolism
glyceraldehyde-3-phosphate degradation
The chemical reactions and pathways resulting in the formation of pyruvate from other compounds, including acetate.
pyruvate anabolism from acetate
pyruvate formation from acetate
pyruvate synthesis from acetate
The chemical reactions and pathways resulting in the breakdown of L-xylitol to form xylulose 5-phosphate. L-xylitol is converted into L-xylulose, which is then phosphorylated to L-xylulose-5-phosphate. This is converted to D-xylulose-5-phosphate via the intermediate L-ribulose-5-phosphate.
L-arabitol and xylitol degradation
xylitol breakdown to xylulose 5-phosphate
xylitol degradation to xylulose 5-phosphate
xylitol utilization
The chemical reactions and pathways resulting in the breakdown of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid.
D-galacturonate breakdown
D-galacturonate catabolism
D-galacturonate degradation
The chemical reactions and pathways resulting in the breakdown of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Catabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.
organophosphonate catabolic process
phosphonate breakdown
phosphonate catabolism
phosphonate degradation
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the delta-nitrogen atom of peptidyl-arginine residues. The reaction is S-adenosyl-L-methionine + -L-arginine = S-adenosyl-L-homocysteine + -N5-methyl-L-arginine.
protein arginine N5-methylase activity
protein-arginine delta-N-methyltransferase activity
protein-arginine N5-methyltransferase activity
S-adenosyl-L-methionine:-L-arginine N-methyltransferase (-N5-methyl-L-arginine-forming)
type IV PRMT activity
type IV protein arginine methyltransferase activity
The chemical reactions and pathways resulting in the breakdown of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.
hopanoid breakdown
hopanoid catabolism
hopanoid degradation
The chemical reactions and pathways resulting in the formation of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.
hopanoid anabolism
hopanoid biosynthesis
hopanoid formation
hopanoid synthesis
Combining with high affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
high affinity Fc receptor activity
high affinity IgE receptor activity
Combining with low affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
low affinity Fc receptor activity
low affinity IgE receptor activity
Combining with high affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
high affinity Fc receptor activity
high affinity IgG receptor activity