NothingMuch/GO-Terms huggingface dataset:
The chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
cellular cell wall macromolecule metabolic process
cellular cell wall macromolecule metabolism
The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a cell wall.
cell wall macromolecule anabolism
cell wall macromolecule biosynthesis
cell wall macromolecule biosynthetic process at cellular level
cell wall macromolecule synthesis
cellular cell wall macromolecule biosynthetic process
The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues.
glucan metabolism
Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.
regulation of endocrine system process
The process in which an organism effects a change that impairs the structure or temporarily subverts the host intercellular junction. Intercellular junction include tight junctions and adherens junctions.
disruption of host cell-cell junction
modification by symbiont of host cell-cell junction
modification by symbiont of host intercellular junctions
modification of host cell-cell junction
modification of host intercellular junctions by symbiont
symbiont-mediated disruption of host cell-cell junction
A process in which a symbiont alters or subverts a cellular biological process in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
modulation by symbiont of host cellular process
modulation of host cellular process by symbiont
regulation by symbiont of host cellular process
regulation of host cellular process by symbiont
Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
regulation of anion transport
A process in which a symbiont interferes with the normal progression through the host cell cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.
modification by symbiont of host cell cycle
modulation by symbiont of host cell cycle
modulation of host cell cycle by symbiont
perturbation of host cell cycle progression
regulation by symbiont of host cell cycle
A process in which a symbiont alters or subverts vacuole organization in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
modulation by symbiont of host vacuole biogenesis
modulation by symbiont of host vacuole organisation
modulation by symbiont of host vacuole organization
modulation of host vacuole organization by symbiont
regulation by symbiont of host vacuole organization
A process in which a symbiont alters or subverts the regulated release of a neurotransmitter from a cell in its host organism.
modification by symbiont of host neurotransmitter secretion
modulation by symbiont of host neurotransmitter secretion
modulation of host neurotransmitter secretion by symbiont
regulation by symbiont of host neurotransmitter secretion
A process in which a symbiont alters or subverts a small GTPase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
modulation by symbiont of host small GTPase mediated signal transduction
modulation of host small GTPase mediated signal transduction by symbiont
perturbation of host small GTPase mediated signal transduction
regulation by symbiont of host small GTPase mediated signal transduction
A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component.
cellular component biogenesis at cellular level
Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.
regulation of vacuole biogenesis
regulation of vacuole organisation
Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.
positive regulation of vacuole biogenesis
positive regulation of vacuole organisation
The controlled release of proteins or DNA by a cell, via the type IV secretion system.
secretion via the type IV secretion system
The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.
development during symbiotic interaction
development involved in symbiotic interaction
development of symbiont during interaction with host
development of symbiont involved in interaction with host
development on or near surface of other organism during symbiotic interaction
development on or near surface of other organism involved in symbiotic interaction
The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
development of symbiont in host intercellular space
development of symbiont in host vascular tissue
Any process that modulates the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.
modulation of development of symbiont during interaction with host
modulation of development of symbiont involved in interaction with host
Any process that stops, prevents, or reduces the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.
negative regulation of development of symbiont during interaction with host
negative regulation of development of symbiont involved in interaction with host
Any process that activates or increases the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.
positive regulation of development of symbiont during interaction with host
positive regulation of development of symbiont involved in interaction with host
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
host endoplasmic reticulum
The lipid bilayer surrounding the host cell endoplasmic reticulum.
host endoplasmic reticulum membrane
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host rough ER has ribosomes adhering to the outer surface.
host rough endoplasmic reticulum
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host smooth ER has no ribosomes adhering to the outer surface.
host smooth endoplasmic reticulum
A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.
host cell ER-Golgi intermediate compartment
host ER-Golgi intermediate compartment
A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to host cell lysosomes for degradation.
host endosome
The lipid bilayer surrounding a host cell endosome.
host endosome membrane
A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.
host Golgi apparatus
Binding to a protein or a protein-containing complex to assist the protein folding process.
chaperone activity
protein binding involved in protein folding
A zone of apposition between the membranes of an organelle with another membrane, either another membrane of the same organelle, a membrane of another organelle, or the plasma membrane. Membrane contact sites (MCSs) are structured by bridging complexes. They are specialized for communication, including the efficient traffic of small molecules such as Ca2+ ions and lipids, as well as enzyme-substrate interactions.
inter-organelle junction
interorganelle junction
MCS
A zone of apposition between endoplasmic-reticulum and mitochondrial membranes, structured by bridging complexes. These contact sites are thought to facilitate inter-organelle calcium and phospholipid exchange.
endoplasmic reticulum-mitochondrion membrane contact site
ER-mitochondrion membrane contact site
MAM
mitochondria-associated ER membrane
mitochondria-associated membrane
mitochondria-endoplasmic reticulum (ER) contact
The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
primary metabolism
The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.
cellular breakdown
cellular catabolism
cellular degradation
The chemical reactions and pathways resulting in the breakdown of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
glycerol ether breakdown
glycerol ether catabolism
glycerol ether degradation
The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.
sulfur biosynthesis
sulfur biosynthetic process
sulfur compound anabolism
sulfur compound biosynthesis
sulfur compound formation
sulfur compound synthesis
The chemical reactions and pathways resulting in the breakdown of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.
sulfur catabolic process
sulfur catabolism
sulfur compound breakdown
sulfur compound catabolism
sulfur compound degradation
A process that results in the breakdown of the cell wall.
cellular cell wall disassembly
The disruption of the cell wall of another organism, leading to damage or temporary subversion of the cell wall.
cell wall disruption in another organism
cell wall disruption in other organism
The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule.
small molecule metabolism
The chemical reactions and pathways resulting in the breakdown of small molecules, any low molecular weight, monomeric, non-encoded molecule.
small molecule catabolism
The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule.
small molecule biosynthesis
Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.
cell cell contact zone
A structure at the distal end of a dendrite adapted to carry out a specific function, e.g. dendriole.
dendrite terminal
dendrite terminal specialization
terminal specialization
terminal specialization of a dendrite
The migrating motile tip of a growing nerve cell dendrite.
dendrite growth cone
The migrating motile tip of a growing nerve cell axon.
axon growth cone
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
cell soma
The plasma membrane of a cell that bears surface projections such as axons, dendrites, cilia, or flagella, excluding the plasma membrane on cell projections.
cell soma membrane
The main axonal trunk, as opposed to the collaterals; i.e., excluding collaterals, terminal, spines, or dendrites.
axon shaft
axon trunk
axonal shaft
The specialized, terminal region of a neuron projection such as an axon or a dendrite.
nerve terminal
neuron projection terminal
neuron terminal specialization
A small membranous protrusion, often ending in a bulbous head and attached to the neuron by a narrow stalk or neck.
spine
The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.
cell migration involved in wound healing epiboly
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism].
response to leptin stimulus
Part of the dendritic spine that connects the dendritic shaft to the head of the dendritic spine.
neck
pedicle
spine neck
The multiplication or reproduction of pancreatic B cells, resulting in the expansion of an pancreatic B cell population. Pancreatic B cell are cells of the pancreas that secrete insulin.
pancreatic B cell proliferation
pancreatic beta cell proliferation
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an fibroblast growth factor stimulus.
cellular response to FGF stimulus
Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.
fibroblast apoptosis
The chemical reactions and pathways resulting in the breakdown of cell wall polysaccharides.
cell wall polysaccharide breakdown
The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, which forms part of the cell wall.
plant-type cell wall polysaccharide breakdown
An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.
clathrin-independent pinocytosis
single-organism macropinocytosis
A membrane-bounded, uncoated intracellular vesicle formed by the process of pinocytosis.
pinocytic vesicle
A defense process that protects an organism from invading foreign DNA.
clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine
Any process that modulates the propensity of rRNA molecules to degradation. Includes processes that both stabilize and destabilize rRNAs.
regulation of ribosomal RNA stability
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with vascular damage and hemorrhage in the bitten organism.
envenomation resulting in hemorrhagic damage to other organism
The process in which an organism effects a change in the function of proteins in a second organism.
modulation of molecular function in other organism
Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.
modulation of voltage-gated potassium channel activity in other organism
Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the function of proteins in a second organism.
negative regulation of molecular function in other organism
Any process in which an organism effects a change in the frequency, rate or extent of the activity of a potassium channel in another organism.
modulation of potassium channel activity in other organism
A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change to the frequency, rate or extent of platelet aggregation in the bitten organism.
envenomation resulting in modulation of platelet aggregation in other organism
envenomation resulting in regulation of platelet aggregation in other organism
The activity of binding selectively and non-covalently to DNA in a sequence-specific manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.
DNA bending involving sequence-specific DNA binding
A process in which a protein is transported to, or maintained in, an actin cortical patch.
protein localisation to actin cortical patch
A process in which a protein is transported to, or maintained in, a location within the cytoskeleton.
protein localisation to cytoskeleton
The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites, occurring in a host cell.
host cell outer membrane
Binding to a ubiquitin-like protein ligase, such as ubiquitin-ligase.
E3 protein ligase binding
small conjugating protein ligase binding
Binding to a ubiquitin-like protein conjugating enzyme such as ubiquitin conjugating enzyme.
E2 protein ligase binding
small protein conjugating enzyme binding
A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane in cells, at sites of endocytosis.
actin cortical patch organisation
A process in which planktonically growing microorganisms of different species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.
multi-species biofilm formation in or on host organism
multi-species biofilm formation on inanimate substrate
multi-species submerged biofilm formation
multi-species surface biofilm formation
A process carried out by gene products in an organism that enable the organism to engage in a symbiotic relationship, a more or less intimate association, with another organism. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs. Microscopic symbionts are often referred to as endosymbionts.
commensalism
host-pathogen interaction
parasitism
symbiosis
symbiosis, encompassing mutualism through parasitism
symbiotic interaction
symbiotic interaction between host and organism
symbiotic interaction between organisms
symbiotic interaction between species
symbiotic process
The attachment of a symbiont to its host via either adhesion molecules, general stickiness, or other mechanisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.
adhesion to host
adhesion to other organism during symbiotic interaction
adhesion to other organism involved in symbiotic interaction
host adhesion
Entry of a symbiont into the body, tissues, or cells of a host organism as part of the symbiont life cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.
entry into cell of other organism during symbiotic interaction
entry into cell of other organism involved in symbiotic interaction
entry into host
entry into host cell via penetration peg
entry into host through host barriers
entry into host via a specialized structure during symbiotic interaction
entry into host via enzymatic degradation of host anatomical structure
entry into host via enzymatic degradation of host cuticle
entry into other organism during symbiotic interaction
entry into other organism involved in symbiotic interaction
host invasion
host penetration
invasion into host
invasion into other organism
invasion of host
invasion of other organism
invasive growth
other organism invasion
penetration into host
penetration into host via a specialized structure
penetration into host via a specialized structure during symbiotic interaction
A process in which a symbiont interferes with, inhibits or disrupts the normal execution of host defense(s) by active mechanisms that normally result in the shutting down of a host pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.
down regulation by organism of defense response of other organism during symbiotic interaction
down regulation by symbiont of host defense response
down-regulation by organism of defense response of other organism during symbiotic interaction
down-regulation by symbiont of host defense response
downregulation by organism of defense response of other organism during symbiotic interaction
downregulation by symbiont of host defense response
inhibition by organism of defense response of other organism during symbiotic interaction
inhibition by symbiont of host defense response
negative regulation by organism of defense response of other organism during symbiotic interaction
negative regulation by organism of defense response of other organism involved in symbiotic interaction
negative regulation by symbiont of host defense response
negative regulation of host defenses
suppression of defense response of other organism
suppression of defense response of other organism involved in symbiotic interaction
suppression of defenses of other organism involved in symbiotic interaction
suppression of host defense response
suppression of host defenses by symbiont
The directed movement of a molecule(s) produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
translocation of molecules into other organism during symbiotic interaction
translocation of molecules into other organism involved in symbiotic interaction
transport of molecules into host
transport of molecules into other organism during symbiotic interaction
Any process evolved to enable an interaction with an organism of a different species.
interaction with another species
interspecies interaction
interspecies interaction between organisms
interspecies interaction with other organisms
Any constituent part of a virion, a complete fully infectious extracellular virus particle.
complete virus particle
virion
virion part