NothingMuch/GO-Terms huggingface dataset:
The formation of a cluster of several metal atoms, including iron, nickel, molybdenum, vanadium, or copper, with one or more bridging (mu-bond) sulfur atoms; amino acids residues in proteins that may ligate the metal sulfur cluster are cysteine, histidine, aspartate, glutamate, serine and cysteine persulfide.
metal incorporation into metallo-sulphur cluster
The incorporation of molybdenum into a metallo-sulfur cluster.
molybdenum incorporation into metallo-sulphur cluster
The glycosylation of a carbon atom of a peptidyl-tryptophan residue.
protein amino acid C-linked glycosylation via tryptophan
The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.
protein amino acid glucuronylation
The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.
C-terminal protein prenylation
protein amino acid prenylation
The covalent attachment of a geranylgeranyl group to a protein.
C-terminal protein geranylgeranylation
protein amino acid geranylgeranylation
The covalent attachment of a palmitoyl group to a protein.
protein amino acid palmitoylation
The covalent attachment of a myristoyl group to a protein.
protein amino acid myristoylation
The alteration of the C-terminal amino acid residue in a protein.
peptide or protein carboxyl-terminal blocking
peptide/protein carboxyl-terminal blocking
The modification of a protein by amino acid glucuronidation.
protein amino acid glucuronidation
The incorporation of nickel into a metallo-sulfur cluster.
nickel incorporation into metallo-sulphur cluster
The incorporation of copper into a metallo-sulfur cluster.
copper incorporation into metallo-sulphur cluster
Catalysis of the reaction: an alcohol + NAD(P)+ = an aldehyde or ketone + NAD(P)H + H+.
alcohol:NAD(P)+ oxidoreductase activity
aldehyde reductase (NADPH/NADH)
Catalysis of the reaction: an aromatic aldehyde + O2 + H2O = an aromatic acid + hydrogen peroxide.
aryl-aldehyde:oxygen oxidoreductase activity
Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.
4-hydroxybenzoate 3-hydroxylase activity
4-hydroxybenzoate 3-monooxygenase (reduced nicotinamide adenine dinucleotide (phosphate))
4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)
4-hydroxybenzoate-3-hydroxylase activity
Catalysis of the reaction: an aliphatic amide = a nitrile + H2O.
3-cyanopyridine hydratase activity
acrylonitrile hydratase activity
aliphatic nitrile hydratase activity
aliphatic-amide hydro-lyase (nitrile-forming)
H-NHase activity
L-NHase activity
NHase activity
nitrile hydro-lyase activity
The chemical reactions and pathways involving acetylene, formula CH2CH2, the simplest of the alkynes.
acetylene metabolism
ethyne metabolic process
ethyne metabolism
The chemical reactions and pathways involving adamantanone, tricyclo(3.3.1.13,7)decanone, a white crystalline solid used as an intermediate for microelectronics in the production of photoresists.
adamantanone metabolism
The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.
alpha-pinene metabolism
The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.
2-aminobenzenesulfonate metabolism
2-aminobenzenesulphonate metabolic process
2-aminobenzenesulphonate metabolism
The chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.
1-aminocyclopropane-1-carboxylate metabolism
ACP metabolic process
ACP metabolism
The chemical reactions and pathways involving arsonoacetate, a synthetic, organic compound containing a single arsenic atom. Arsonoacetate and other arsenic containing compounds are used in agricultural applications as animal feed additives, cotton defoliants and post-emergence grass herbicides.
arsonoacetate metabolism
The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide.
atrazine metabolism
The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.
benzoate metabolism
The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid) that occur in the absence of oxygen.
anaerobic benzoate metabolism
The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.
beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism
The chemical reactions and pathways involving biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).
biphenyl metabolism
xenene metabolic process
xenene metabolism
The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.
(+)-camphor metabolism
camphor metabolic process
camphor metabolism
The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.
caprolactam metabolism
The chemical reactions and pathways involving carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.
CAR metabolic process
CAR metabolism
carbazole metabolism
The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.
carbon tetrachloride metabolism
The chemical reactions and pathways involving 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.
2-chloro-N-isopropylacetanilide metabolism
propachlor metabolic process
propachlor metabolism
The chemical reactions and pathways involving cyclohexanol, the monohydroxy derivative of cyclohexane. It is used as a solvent and blending agent.
cyclohexanol metabolism
The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.
dibenzofuran metabolism
The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.
dibenzo-p-dioxin metabolism
oxanthrene metabolic process
oxanthrene metabolism
phenodioxin metabolic process
phenodioxin metabolism
The chemical reactions and pathways involving dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond. Dibenzothiophene derivatives can be detected in diesel oil following hydrodesulfurization treatment to remove sulfur compounds that would otherwise generate sulfur oxides during combustion.
dibenzothiophene metabolism
diphenylene sulfide metabolic process
diphenylene sulfide metabolism
The chemical reactions and pathways involving 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).
2,4-dichlorobenzoate metabolism
The chemical reactions and pathways involving 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.
1,2-dichloroethane metabolism
The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.
2,4-D metabolic process
2,4-D metabolism
2,4-dichlorophenoxyacetic acid metabolism
The chemical reactions and pathways involving organic ethers, any anhydride of the general formula R1-O-R2, formed between two identical or nonidentical organic hydroxy compounds.
ether metabolism
organic ether metabolic process
organic ether metabolism
The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation.
benzene metabolism
The chemical reactions and pathways resulting in the breakdown of ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring. It is a colorless liquid with a pungent odor used as a solvent and as a component of automotive and aviation fuels.
ethylbenzene metabolic process
ethylbenzene metabolism
The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline.
nitrobenzene metabolism
The chemical reactions and pathways involving limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.
limonene metabolism
The chemical reactions and pathways involving mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.
mandelate metabolism
mandelic acid metabolic process
mandelic acid metabolism
The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.
3-hydroxytoluene metabolic process
3-hydroxytoluene metabolism
m-cresol metabolism
meta-cresol metabolic process
meta-cresol metabolism
The chemical reactions and pathways involving methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.
2-butanone metabolic process
2-butanone metabolism
MEK metabolic process
MEK metabolism
methyl ethyl ketone metabolism
The chemical reactions and pathways involving 3-methylquinoline, C10H9N, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.
3-methylquinoline metabolism
The chemical reactions and pathways involving nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.
nicotine metabolism
The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.
nitrilotriacetate metabolism
The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.
2-nitropropane metabolism
The chemical reactions and pathways involving n-octane, the 8 carbon straight chain alkane used in organic syntheses, calibrations, and azeotropic distillations. It is a common component of gasoline and other petroleum products and the engine fuel antiknocking properties of an isomer of n-octane are used as a comparative standard in the Octane Rating System.
n-octane metabolism
The chemical reactions and pathways involving orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen, and synthesized, probably as a fungicide, by some higher plants.
orcin metabolic process
orcin metabolism
orcinol metabolism
The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.
organometal metabolism
The chemical reactions and pathways involving organotin, an organic compound containing a tin atom.
organotin metabolism
The chemical reactions and pathways involving any organosilicon, organic compounds that contain silicon, a nonmetal element analogous to carbon.
organosilicon metabolism
organosilicone metabolic process
organosilicone metabolism
The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the presence of oxygen.
aerobic organosilicon metabolism
aerobic organosilicone metabolic process
aerobic organosilicone metabolism
The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.
anaerobic organosilicon metabolism
anaerobic organosilicone metabolic process
anaerobic organosilicone metabolism
The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.
xylene metabolism
The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.
m-xylene metabolism
meta-xylene metabolic process
meta-xylene metabolism
The chemical reactions and pathways involving o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.
o-xylene metabolism
ortho-xylene metabolic process
ortho-xylene metabolism
The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.
p-xylene metabolism
para-xylene metabolic process
para-xylene metabolism
The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.
parathion metabolism
The chemical reactions and pathways involving p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.
p-cymene metabolism
The chemical reactions and pathways involving phenanthrene, a tricyclic aromatic hydrocarbon used in explosives and in the synthesis of dyes and drugs. Although phenanthrene is not mutagenic or carcinogenic, it has been shown to be toxic to marine diatoms, gastropods, mussels, crustaceans, and fish.
phenanthrene metabolism
The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.
carbolic acid metabolic process
carbolic acid metabolism
hydroxybenzene metabolic process
hydroxybenzene metabolism
phenol-containing compound metabolism
The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.
aerobic phenol-containing compound metabolism
The chemical reactions and pathways involving 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.
4-nitrophenol metabolism
p-nitrophenol metabolic process
p-nitrophenol metabolism
The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.
PCP metabolic process
PCP metabolism
pentachlorophenol metabolism
The chemical reactions and pathways involving 3-phenylpropionate, the anion of phenylpropanoic acid. It is produced from putrefaction of proteins in soil or breakdown of several constituents of plants, such as lignin, various oils and resins.
3-phenylpropionate metabolism
hydrocinnamic acid metabolic process
hydrocinnamic acid metabolism
phenylpropanoate metabolic process
phenylpropanoate metabolism
The chemical reactions and pathways involving phthalate, the anion of phthalic acid. Phthalic acid diesters are used industrially in the production of a variety of household and consumer goods including plastic polymers, lubricating oils, and carriers for perfumes in cosmetics, while phthalic acid itself is used industrially as a plasticizer. Terephthalate is used in the synthesis of polyethylene terephthalate (polyethene terephthlate, abbreviated PET or PETE), a plastic polymer with many commercial uses.
phthalate metabolism
phthalic acid metabolic process
phthalic acid metabolism
The chemical reactions and pathways involving propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining. It is used mainly in the preparation of alkylates for gasoline and in the production of polypropylene, acrylonitrile, propylene oxide and a number of other industrial chemicals.
propylene metabolism
The chemical reactions and pathways involving any s-triazine compound. These compounds include many pesticides of widespread use in agriculture, and are characterized by a symmetrical hexameric ring consisting of alternating carbon and nitrogen atoms.
s-triazine compound metabolism
The chemical reactions and pathways involving styrene, an aromatic hydrocarbon liquid soluble in ether and alcohol. When heated, exposed to light or added to a peroxide catalyst, it undergoes polymerization to form polystyrene, a versatile material used in the manufacture of plastics, synthetic rubber, thermal insulation, and packaging. Styrene is a classified mutagen and a suspected carcinogen.
styrene metabolism
The chemical reactions and pathways involving thiocyanate, the anion of thiocyanic acid, a toxic cyanide derivative commonly formed as a by-product in the production of gas for fuel, coke, and substances for chemical industries.
thiocyanate metabolism
thiocyanic acid metabolic process
thiocyanic acid metabolism
The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications.
methylbenzene metabolic process
methylbenzene metabolism
toluene metabolism
The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, that occur in the absence of oxygen.
anaerobic toluene metabolism
The chemical reactions and pathways involving toluene-4-sulfonate, the anion of 4-toluene sulfonic acid, a white crystalline solid which is highly hygroscopic and soluble in water.
4-methylbenzenesulfonate metabolic process
4-methylbenzenesulfonate metabolism
4-toluenesulfonate metabolic process
4-toluenesulfonate metabolism
toluene-4-sulfonate metabolism
toluene-4-sulphonate metabolic process
toluene-4-sulphonate metabolism
The chemical reactions and pathways involving trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it. This includes the explosive TNT, 1-methyl-2,4,6-trinitrobenzene.
trinitrotoluene metabolism
The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid. It is prepared from toluene treated with concentrated sulfuric and nitric acids and is used in shells, bombs, and blasting explosives.
2,4,6-trinitrotoluene metabolism
TNT metabolic process
TNT metabolism
The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, that occur in the absence of oxygen.
anaerobic 2,4,6-trinitrotoluene metabolism
The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated broad spectrum contact insecticide.
1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolism
DDT metabolic process
DDT metabolism
The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.
TCE metabolic process
TCE metabolism
trichloroethene metabolic process
trichloroethene metabolism
trichloroethylene metabolism
The chemical reactions and pathways involving 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound which is widely used as a herbicide, often as a weed killer for home lawns.
2,4,5-T metabolic process
2,4,5-T metabolism
2,4,5-trichlorophenoxyacetic acid metabolism
The chemical reactions and pathways involving vanillin, an aromatic hydrocarbon which occurs naturally in black vanilla bean pods and can be obtained as a by-product of the pulp and paper industry by the oxidative breakdown of lignin.
vanillic aldehyde metabolic process
vanillic aldehyde metabolism
vanillin metabolism
The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.
Z-phenylacetaldoxime metabolism
A reproductive behavior that results in the deposition of eggs (either fertilized or not) upon a surface or into a medium such as water.
egg laying
egg-laying
oviposition
post-mating oviposition
Any cellular component of a host cell. The host is an organism in which another organism, for instance a parasite or symbiont, spends part or all of its life cycle and from which it obtains nourishment and/or protection.
host organism
The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.
collagen and cuticulin-based cuticle molting cycle
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
CDL1 complex
CRL1 complex
Cul1-RING ubiquitin ligase complex
cullin-RING ligase 1
SCF complex
SCF complex substrate recognition subunit
Skp1/Cul1/F-box protein complex
The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.
quasispherical viral capsid
The process by which, after initial infection, a virus lies dormant within a cell and viral production ceases. The process ends when the virus switches from latency and starts to replicate.
latent virus infection
phage lysogeny
viral dormancy