NothingMuch/GO-Terms huggingface dataset:
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism.
down regulation of metabolic process
down-regulation of metabolic process
downregulation of metabolic process
inhibition of metabolic process
inhibition of organismal metabolic process
negative regulation of metabolism
negative regulation of multicellular organismal metabolic process
negative regulation of organismal metabolism
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism.
activation of metabolic process
positive regulation of metabolism
positive regulation of multicellular organismal metabolic process
positive regulation of organismal metabolism
stimulation of metabolic process
stimulation of organismal metabolic process
up regulation of metabolic process
up-regulation of metabolic process
up-regulation of organismal metabolic process
upregulation of metabolic process
Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of substances.
regulation of breakdown
regulation of catabolism
regulation of degradation
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
down regulation of catabolic process
down-regulation of catabolic process
downregulation of catabolic process
inhibition of catabolic process
negative regulation of breakdown
negative regulation of catabolism
negative regulation of degradation
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
activation of catabolic process
positive regulation of breakdown
positive regulation of catabolism
positive regulation of degradation
stimulation of catabolic process
up regulation of catabolic process
up-regulation of catabolic process
upregulation of catabolic process
The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.
external leaflet of plasma membrane
juxtamembrane
outer surface of cytoplasmic membrane
The leaflet the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.
internal leaflet of plasma membrane
internal side of plasma membrane
juxtamembrane
The process in which chloroplasts in photosynthetic cells migrate toward illuminated sites to optimize photosynthesis and move away from excessively illuminated areas to protect the photosynthetic machinery.
chloroplast movement
The process in which the cellular identity of auditory hair cells is acquired and determined.
auditory hair cell fate commitment
The process in which a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis.
hypodermal cell differentiation
Organization of a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation, thereby effecting growth and development of a plant by giving rise to more meristem or specialized tissue.
meristem organisation
meristem organization
Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.
regulation of gibberellic acid mediated signalling
The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
adaxial/abaxial determination
The establishment, maintenance and elaboration of the proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).
proximal/distal axis determination
proximodistal axis specification
The establishment, maintenance and elaboration of the anterior/posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
anterior/posterior axis determination
The establishment, maintenance and elaboration of the dorsal/ventral axis. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.
dorsal-ventral axis specification
dorsal/ventral axis determination
dorsoventral axis specification
The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
anterior/posterior pattern formation
The regionalization process in which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.
dorsal-ventral pattern formation
dorsal/ventral pattern specification
dorsoventral pattern formation
The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).
proximal/distal pattern specification
The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
adaxial/abaxial pattern formation
The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.
radial pattern specification
The process in which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
hypodermal cell fate specification
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.
regulation of flavonoid anabolism
regulation of flavonoid biosynthesis
regulation of flavonoid formation
regulation of flavonoid synthesis
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.
activation of flavonoid biosynthetic process
positive regulation of flavonoid anabolism
positive regulation of flavonoid biosynthesis
positive regulation of flavonoid formation
positive regulation of flavonoid synthesis
stimulation of flavonoid biosynthetic process
up regulation of flavonoid biosynthetic process
up-regulation of flavonoid biosynthetic process
upregulation of flavonoid biosynthetic process
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.
down regulation of flavonoid biosynthetic process
down-regulation of flavonoid biosynthetic process
downregulation of flavonoid biosynthetic process
inhibition of flavonoid biosynthetic process
negative regulation of flavonoid anabolism
negative regulation of flavonoid biosynthesis
negative regulation of flavonoid formation
negative regulation of flavonoid synthesis
Any process that modulates the frequency, rate or extent of signal transduction.
regulation of signaling pathway
regulation of signalling pathway
Any process that activates or increases the frequency, rate or extent of signal transduction.
activation of signal transduction
positive regulation of signaling pathway
positive regulation of signalling pathway
stimulation of signal transduction
up regulation of signal transduction
up-regulation of signal transduction
upregulation of signal transduction
Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction.
down regulation of signal transduction
down-regulation of signal transduction
downregulation of signal transduction
inhibition of signal transduction
negative regulation of signaling pathway
negative regulation of signalling pathway
The external part of the cell wall and/or plasma membrane.
cell associated
cell bound
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
cell growth and/or maintenance
cell physiology
cellular physiological process
single-organism cellular process
The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete.
oocyte cell differentiation
Any process that restricts, stops or prevents a cell from adopting a specific cell fate.
down regulation of cell fate specification
down-regulation of cell fate specification
downregulation of cell fate specification
inhibition of cell fate specification
suppression of cell fate
The process in which a relatively unspecialized cell acquires the specialized features of a glial cell.
glia cell differentiation
neuroglia differentiation
The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
cardiac precursor cell differentiation
cardioblast cell differentiation
cardiomyocyte generation
The lipid bilayer surrounding an endosome.
endosomal membrane
The side (leaflet) of the endosome membrane that faces the cytoplasm.
external leaflet of endosome membrane
external side of endosome membrane
The process in which the anatomical structures of the shoot are generated and organized. The shoot is the part of a seed plant body that is usually above ground.
shoot morphogenesis
The series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
phytochrome signaling pathway
red or far red light signaling pathway
red or far-red light signal transduction
red or far-red light signalling pathway
red/far red light signaling pathway
The division of a chloroplast within a cell to form two or more separate chloroplast compartments. This division occurs independently of mitosis.
chloroplast division
The chemical reactions and pathways resulting in the formation of proanthocyanidin.
proanthocyanidin anabolism
proanthocyanidin biosynthesis
proanthocyanidin formation
proanthocyanidin synthesis
The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids.
wax anabolism
wax biosynthesis
wax formation
wax synthesis
The process in which a relatively unspecialized epidermal cell acquires the specialized features of a trichome cell. An example of this process is found in Arabidopsis thaliana.
trichome cell differentiation
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.
thylakoid membrane organisation
thylakoid membrane organization and biogenesis
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a boron-containing substance stimulus.
response to boron
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
heavy metal sensitivity/resistance
response to heavy metal
response to metal
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.
response to iron
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.
response to iron(II)
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(III) ion stimulus.
response to iron(III)
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.
response to manganese
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.
response to zinc
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aluminum ion stimulus.
response to aluminium ion
response to aluminum
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nickel cation stimulus.
response to nickel
The regionalization process that gives rise to the patterning of the conducting tissues. An example of this process is found in Arabidopsis thaliana.
vascular tissue pattern formation
The process in which a guard mother cell acquires the specialized features of a guard cell.
stomatal cell differentiation
The process in which a relatively unspecialized cell acquires the specialized features of a trichoblast, a root epidermal cell that will give rise to a root hair.
trichoblast cell differentiation
The process whose specific outcome is the progression of the primary meristem over time, from formation to the mature structure, as it occurs during plant embryogenesis. The primary meristem tissue is the protoderm, ground meristem and procambium.
primary meristem histogenesis
The division of the zygote into two daughter cells that will adopt developmentally distinct potentials.
zygote asymmetric cytokinesis
The process in which an organism retains a population of meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.
maintenance of meristem cell identity
meristem cell maintenance
Any process involved in maintaining the size and shape of a meristem.
regulation of meristem size
The process whose specific outcome is the progression of phloem and/or xylem over time, from formation to the mature structure. An example of this process is found in Arabidopsis thaliana.
vascular tissue development
vascular tissue histogenesis
The formation of the principal food-conducting tissue of a vascular plant.
phloem histogenesis
The formation of the principal water-conducting tissue of a vascular plant.
xylem histogenesis
The process in which the structures of a hair cell (trichome) cell are generated and organized. This process occurs while the initially relatively unspecialized epidermal cell is acquiring the specialized features of a hair cell. An example of this process is found in Arabidopsis thaliana.
trichome cell morphogenesis during differentiation
Any process that modulates the frequency, rate or extent of ethylene (ethene) signal transduction.
regulation of ethene mediated signaling pathway
regulation of ethene mediated signalling pathway
regulation of ethylene mediated signaling pathway
regulation of ethylene mediated signalling pathway
Any process that stops, prevents, or reduces the frequency, rate or extent of systemic acquired resistance.
down regulation of systemic acquired resistance
down-regulation of systemic acquired resistance
downregulation of systemic acquired resistance
inhibition of systemic acquired resistance
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
response to red light stimulus
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.
regulation of abscisic acid anabolism
regulation of abscisic acid biosynthesis
regulation of abscisic acid formation
regulation of abscisic acid synthesis
The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.
camalexin anabolism
camalexin biosynthesis
camalexin formation
camalexin synthesis
The chemical reactions and pathways involving mycothiol, which consists of N-acetyl-L-cysteine linked to a pseudodisaccharide, D-glucosamine and myo-inositol. Mycothiol is produced in actinomycetes like mycobacteria and serves similar functions to glutathione.
mycothiol metabolism
The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including glutamate.
proline breakdown to glutamate
proline degradation to glutamate
proline oxidation
The chemical reactions and pathways involving ureide, allantoin and allantoate, which are the organic forms of nitrogen in nitrogen fixing and transporting plants.
ureide metabolism
The chemical reactions and pathways resulting in the formation of cutin, a waxy substance, which combined with cellulose forms a substance nearly impervious to water and constituting the cuticle in plants.
cutin anabolism
cutin biosynthesis
cutin formation
cutin synthesis
The chemical reactions and pathways involving fructan, a polysaccharide consisting of fructose residues.
fructan metabolism
levan metabolic process
The chemical reactions and pathways resulting in the formation of fructan a polysaccharide consisting of fructose residues.
fructan anabolism
fructan biosynthesis
fructan formation
fructan synthesis
levan biosynthesis
levan biosynthetic process
The chemical reactions and pathways resulting in the breakdown of fructan, a polysaccharide consisting of fructose residues.
fructan breakdown
fructan catabolism
fructan degradation
levan catabolic process
levan catabolism
The regionalization process that specifies animal organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.
organ boundary specification
A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a seed. Seed dormancy is a suspension of most physiological activity and growth in a seed, including the embryo contained therein, that can be reactivated. It often requires special conditions for reactivation, such as specific temperature, scarification, or leaching of inhibitors.
seed dormancy
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.
response to cesium
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).
response to X-ray radiation stimulus
The chemical reactions and pathways involving wax, a compound containing C16 and C18 fatty acids.
wax metabolism
The process in which a change in the level of a mono- or disaccharide such as glucose, fructose or sucrose triggers the expression of genes controlling metabolic and developmental processes.
sugar mediated signalling
Any process that modulates the frequency, rate or extent of cellular defense response.
regulation of cellular defence response
The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.
alpha-tocopherol biosynthesis
alpha-tocopherol biosynthetic process
tocopherol biosynthesis
tocopherol biosynthetic process
vitamin E anabolism
vitamin E biosynthesis
vitamin E formation
vitamin E synthesis
The chemical reactions and pathways involving mucilage, a gelatinous substance secreted by plants.
mucilage metabolism
The chemical reactions and pathways resulting in the formation of mucilage, a gelatinous substance secreted by plants.
mucilage anabolism
mucilage biosynthesis
mucilage formation
mucilage synthesis
The formation of reticulate pollen wall pattern consisting of two layers, exine and intine.
pollen wall formation
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
response to ionising radiation
response to ionizing radiation stimulus