NothingMuch/GO-Terms huggingface dataset:
The directed killing of a gram-negative bacterium by a neutrophil.
neutrophil mediated killing of gram-negative bacterium
The directed killing of a gram-positive bacterium by a neutrophil.
neutrophil mediated killing of gram-positive bacterium
The directed killing of a fungal cell by a neutrophil.
neutrophil mediated killing of fungus
Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a target cell, the directed killing of a target cell by a neutrophil.
regulation of neutrophil mediated cell killing
Any process that decreases the frequency, rate or extent of the directed killing of a target cell by a neutrophil.
down regulation of neutrophil mediated cytotoxicity
down-regulation of neutrophil mediated cytotoxicity
downregulation of neutrophil mediated cytotoxicity
inhibition of neutrophil mediated cytotoxicity
negative regulation of neutrophil mediated cell killing
Any process that decreases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.
down regulation of neutrophil mediated killing of symbiont cell
down-regulation of neutrophil mediated killing of symbiont cell
downregulation of neutrophil mediated killing of symbiont cell
inhibition of neutrophil mediated killing of symbiont cell
Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.
down regulation of neutrophil mediated killing of bacterium
down-regulation of neutrophil mediated killing of bacterium
downregulation of neutrophil mediated killing of bacterium
inhibition of neutrophil mediated killing of bacterium
Any process that increases the frequency, rate or extent of the directed killing of a target cell by a neutrophil.
activation of neutrophil mediated cytotoxicity
positive regulation of neutrophil mediated cell killing
stimulation of neutrophil mediated cytotoxicity
up regulation of neutrophil mediated cytotoxicity
up-regulation of neutrophil mediated cytotoxicity
upregulation of neutrophil mediated cytotoxicity
Any process that increases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.
activation of neutrophil mediated killing of symbiont cell
stimulation of neutrophil mediated killing of symbiont cell
up regulation of neutrophil mediated killing of symbiont cell
up-regulation of neutrophil mediated killing of symbiont cell
upregulation of neutrophil mediated killing of symbiont cell
Any process that increases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.
activation of neutrophil mediated killing of bacterium
stimulation of neutrophil mediated killing of bacterium
up regulation of neutrophil mediated killing of bacterium
up-regulation of neutrophil mediated killing of bacterium
upregulation of neutrophil mediated killing of bacterium
A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum.
protein localisation in endoplasmic reticulum
protein localization in endoplasmic reticulum
protein localization in ER
The chemical reactions and pathways involving L-asparagine, (2S)-2-amino-3-carbamoylpropanoic acid.
L-asparagine metabolism
The process in which the migration of a dendrite is directed to a specific target site in response to a combination of attractive and repulsive cues.
dendritic guidance
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.
response to magnetic stimulus
A spliceosomal complex that is formed by association of the 5' splice site and the branch point sequence with specific snRNPs. The prespliceosome includes many proteins in addition to those found in the bound snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation. Prespliceosome complexes are not active for splicing, but are instead an early step in the assembly of a spliceosomal complex.
mammalian spliceosomal complex A
prespliceosomal complex
yeast spliceosomal complex B
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
mammalian spliceosomal complex B
mammalian spliceosomal complex B1
yeast spliceosomal complex A2-1
A spliceosomal complex that is formed by the displacement of the two snRNPs from the precatalytic spliceosome; three snRNPs including U5 remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
activated spliceosome
mammalian spliceosomal complex B*
mammalian spliceosomal complex B2
yeast spliceosomal complex A1
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
mammalian spliceosomal complex C
mammalian spliceosomal complex C1
yeast spliceosomal complex A2-2
A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and three snRNPs, either U2 or U12, U5, and either U6 or U6atac.
mammalian spliceosomal complex I
A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, including U5.
mammalian spliceosomal complex C2
yeast spliceosomal complex A2-3
A process that identifies and degrades defective or aberrant RNAs.
aberrant RNA catabolic process
RNA quality control
The set of processes involved in identifying and degrading defective or aberrant RNAs within the cytoplasm.
cytoplasmic aberrant RNA catabolic process
cytoplasmic RNA quality control
A process that identifies and degrades defective or aberrant RNAs within the nucleus.
nuclear aberrant RNA catabolic process
nuclear RNA quality control
A process that identifies and degrades defective or aberrant mRNAs within the nucleus.
nuclear aberrant mRNA catabolic process
nuclear mRNA quality control
nuclear retention of pre-mRNA at the site of transcription
nuclear retention of pre-mRNA with aberrant 3\'-ends at the site of transcription
nuclear retention of unspliced pre-mRNA at the site of transcription
The chemical reactions and pathways resulting in the breakdown of cryptic unstable transcripts (CUTs).
cryptic unstable transcript catabolic process
The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.
poly(A)-dependent mRNA catabolic process
The series of events required for an organism to receive sensory mechanical stimulus resulting from air flow, convert it to a molecular signal, and recognize and characterize the signal.
perception of wind
sensory perception of air flow
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phospholipids.
regulation of phospholipid anabolism
regulation of phospholipid biosynthesis
regulation of phospholipid formation
regulation of phospholipid synthesis
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phospholipids.
down regulation of phospholipid biosynthetic process
down-regulation of phospholipid biosynthetic process
downregulation of phospholipid biosynthetic process
inhibition of phospholipid biosynthetic process
negative regulation of phospholipid anabolism
negative regulation of phospholipid biosynthesis
negative regulation of phospholipid formation
negative regulation of phospholipid synthesis
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phospholipids.
activation of phospholipid biosynthetic process
positive regulation of phospholipid anabolism
positive regulation of phospholipid biosynthesis
positive regulation of phospholipid formation
positive regulation of phospholipid synthesis
stimulation of phospholipid biosynthetic process
up regulation of phospholipid biosynthetic process
up-regulation of phospholipid biosynthetic process
upregulation of phospholipid biosynthetic process
A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule.
DNA conformation modification
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-9 stimulus.
response to IL-9
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-11 stimulus.
response to IL-11
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.
response to parathyroid hormone stimulus
The cleavage and rejoining of intermediates, such as Holliday junctions, formed during DNA recombination to produce two intact molecules in which genetic material has been exchanged.
resolution of recombination intermediates
A protein complex that consists of only SMAD proteins; may be homomeric or heteromeric. Heteromeric complexes act as transcription factors while homomeric complexes exist but are transcriptionally inactive. Hetero- versus homotrimerization is largely enthalpy driven.
SMAD complex
The aggregation, arrangement and bonding together of a set of components to form the DNA replication preinitiation complex, a protein-DNA complex that is assembled at DNA replication origins as part of initiation of DNA replication. The complex consists of proteins that initiate the DNA binding, melt the helix and enable helicase activity.
DNA replication preinitiation complex formation
pre-IC complex assembly
Any process in which a ribonucleoprotein complex is transported to, or maintained in, a specific location within a cell.
cellular ribonucleoprotein complex localization
establishment and maintenance of ribonucleoprotein complex localization
ribonucleoprotein complex localisation
RNP localization
Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
protein localisation to chromatin
The directed movement of a protein to a part of a chromosome that is organized into chromatin.
establishment of protein localisation to chromatin
A signaling process that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle.
SAC
signal transduction involved in spindle assembly checkpoint
spindle assembly checkpoint
A signaling process that contributes to a mitotic cell cycle checkpoint that originates from the spindle and delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and oriented, the completion of anaphase until chromosomes are attached to the spindle, or mitotic exit and cytokinesis when the spindle does not form.
mitotic cell cycle spindle checkpoint
mitotic spindle checkpoint
signal transduction involved in mitotic cell cycle spindle checkpoint
signal transduction involved in mitotic spindle checkpoint
topo II checkpoint
topoisomerase II checkpoint
Any process in which a protein is transported to, or maintained at, the juxtaparanode region of an axon.
protein localisation to juxtaparanode region of axon
The process in which a protein is incorporated into a membrane raft. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.
establishment of protein localization to membrane raft
The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.
protein targeting to autophagosome
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus.
cellular response to abiotic stress
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
cellular response to biotic stress
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
cellular response to bacteria associated molecule
cellular response to bacterial associated molecule
cellular response to bacterium associated molecule
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
cellular response to endotoxin
cellular response to LPS
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.
cellular response to acid
cellular response to acid anion
cellular response to oxoanion
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.
cellular response to amino acid
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus.
cellular response to ammonia
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
cellular response to arsenic
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
cellular response to heavy metal
cellular response to metal
A protein complex that constitutes a specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. The complex contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins.
Sec complex-associated translocon complex
Any process that modulates the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.
regulation of translational initiation in response to nutrient starvation
The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid.
L-methionine anabolism
L-methionine biosynthesis
L-methionine formation
L-methionine synthesis
The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.
\'de novo\' L-methionine anabolism
\'de novo\' L-methionine biosynthesis
\'de novo\' L-methionine formation
\'de novo\' L-methionine synthesis
The chemical reactions and pathways resulting in the formation of homocysteine, 2-amino-4-sulfanylbutanoic acid.
homocysteine anabolism
homocysteine biosynthesis
homocysteine formation
homocysteine synthesis
The chemical reactions and pathways involving 1-butanol, an alkyl primary alcohol with the formula C4H10O.
1-butanol metabolism
butan-1-ol metabolic process
butanol metabolic process
The chemical reactions and pathways resulting in the formation of 1-butanol, an alkyl primary alcohol with the formula C4H10O.
1-butanol anabolism
1-butanol biosynthesis
1-butanol formation
1-butanol synthesis
butan-1-ol biosynthetic process
butanol biosynthetic process
The chemical reactions and pathways involving morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.
morphine metabolism
The chemical reactions and pathways resulting in the breakdown of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.
ipecac alkaloid catabolism
isoquinoline alkaloid breakdown
isoquinoline alkaloid catabolism
isoquinoline alkaloid degradation
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
cellular response to cadmium
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
cellular response to Ca2+ ion
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.
cellular response to copper
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.
cellular response to iron
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.
cellular response to manganese
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.
cellular response to vitamin A acid
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.
cellular response to calciferol
cellular response to cholecalciferol
cellular response to ergocalciferol
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.
cellular response to adenosine 5\'-triphosphate
cellular response to adenosine triphosphate
The accumulation of acetylcholine-gated cation channels in a narrow, central region of muscle fibers, in apposition to nerve terminals.
skeletal muscle AChR clustering
skeletal muscle nicotinic acetylcholine receptor clustering
A component of the cell division site that contains the mid1, cdr2, wee1, klp8, and blt1 proteins, and is involved in contractile ring localization. Medial cortical node complexes appear as cortical dots in the middle of the cell during interphase, and function to recruit other ring components in early mitosis.
mid1p medial cortical dot
midsome
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.
cellular response to gamma-interferon
cellular response to immune interferon
cellular response to interferon-gamma
cellular response to type II IFN
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.
cellular response to IL-1
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.
cellular response to IL-12
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.
cellular response to IL-15
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.
cellular response to IL-18
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-2 stimulus.
cellular response to IL-2
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus.
cellular response to IL-4
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus.
cellular response to IL-6
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-9 stimulus.
cellular response to IL-9
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.
cellular response to TNF
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type I interferon stimulus. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.
cellular response to type I IFN
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type III interferon stimulus. Interferon lambda is the only member of the type III interferon found so far.
cellular response to interferon-lambda
cellular response to type III IFN
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.
cellular response to double-stranded RNA
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
cellular response to ethene stimulus
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
cellular response to gibberellic acid stimulus
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin stimulus.
cellular response to gonadotrophin stimulus