NothingMuch/GO-Terms huggingface dataset:
Catalysis of the reaction: ATP + H2O + putrescine(out) -> ADP + phosphate + putrescine(in).
ATPase-coupled putrescine transmembrane transporter activity
putrescine porter activity
putrescine-importing ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glutamine(out) -> ADP + phosphate + glutamine(in).
ATPase-coupled glutamine transmembrane transporter activity
glutamine porter activity
glutamine-importing ATPase activity
Catalysis of the reaction ATP + H2O + fatty acyl CoA(Side 1) = ADP + phosphate + fatty acyl CoA(Side 2). A fatty acyl CoA group is any acyl group derived from a fatty acid with a coenzyme A group attached to it.
ABC-type fatty-acyl-CoA transporter
ATPase-coupled fatty-acyl-CoA transmembrane transporter activity
fatty acyl CoA transporter activity
fatty-acyl-CoA transmembrane transporter activity
fatty-acyl-CoA-transporting ATPase
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).
carbohydrate uptake transporter activity
carbohydrate-importing ATPase activity
sugar transporter
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-ribose(out) = ADP + phosphate + D-ribose(in).
D-ribose porter activity
D-ribose-importing ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-arabinose(out) = ADP + phosphate + L-arabinose(in).
L-arabinose porter activity
L-arabinose-importing ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-xylose(out) = ADP + phosphate + D-xylose(in).
ATPase-coupled D-xylose transmembrane transporter activity
D-xylose porter activity
D-xylose-importing ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-allose(out) = ADP + phosphate + D-allose(in).
D-allose porter activity
D-allose-importing ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-enterobactin(out) = ADP + phosphate + ferric-enterobactin(in).
ATP-dependent ferric-enterobactin transmembrane transporter activity
ATPase-coupled ferric-enterobactin transmembrane transporter activity
ferric-enterobactin ABC transporter
ferric-enterobactin porter activity
ferric-enterobactin-transporting ATPase activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-hydroxamate(out) = ADP + phosphate + ferric-hydroxamate(in).
ATP-dependent ferric-hydroxamate transmembrane transporter activity
ATP-dependent iron-chelate transporter activity
ATPase-coupled ferric-hydroxamate transmembrane transporter activity
ATPase-coupled iron-chelate transporter activity
ferric-hydroxamate ABC transporter
ferric-hydroxamate porter activity
ferric-hydroxamate transmembrane transporter activity
ferric-hydroxamate-transporting ATPase activity
iron-chelate-transporting ATPase activity
Enables the transfer of L-diaminopimelate from one side of a membrane to the other. L-diaminopimelate is the L-enantiomer anion of 2,6-diaminoheptanedioic acid.
cystine/diaminopimelate porter activity
L-diaminopimelate transporter activity
A large protein complex, containing 12-15 subunits, that spans the cell envelope of Gram-negative bacteria and mediates the movement of proteins into the extracellular environment. The complex includes a component in the cytoplasm, an inner membrane subcomplex that reaches into the periplasmic compartment and a secretion pore in the outer membrane. Proteins using the Type II pathway are transported across the cytoplasmic membrane by the Sec or Tat complex.
general secretion pathway-associated complex
main terminal branch
MTB
Sec-dependent secretion system-associated complex
T2SS-associated complexes
The process in which proteins are secreted across the outer membrane of Gram-negative bacteria by the type II secretion system. Proteins using this pathway are first translocated across the cytoplasmic membrane via the Sec or Tat pathways.
protein secretion by the general secretion pathway
protein secretion by the general secretory pathway
protein secretion by the T2S
protein secretion by the T2SS
protein secretion by the type II protein secretion system
type II protein secretion system
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(out) = ADP + phosphate + Zn2+(in).
ATP-dependent zinc transmembrane transporter activity
ATPase-coupled zinc transmembrane transporter activity
zinc porter activity
zinc transporting ATPase activity
zinc-transporting ATPase activity
Enables the transfer of a microcin from one side of a membrane to the other.
microcin uptake permease activity
Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.
murein peptide transporter activity
muropeptide transporter activity
Binding to a toxic substance, a poisonous substance that causes damage to biological systems.
antitoxin activity
lipoprotein antitoxin
Enables the directed movement of lipid-linked peptidoglycans into, out of or within a cell, or between cells.
lipid-linked murein transporter activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 2-keto-3-deoxygluconate(out) + H+(out) = 2-keto-3-deoxygluconate(in) + H+(in).
2-keto-3-deoxygluconate:hydrogen symporter activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lactate (out) + H+ (out) = lactate (in) + H+ (in).
lactate permease
lactate:hydrogen porter activity
lactate:hydrogen symporter activity
lactate:proton porter activity
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + H+(out) = glycine betaine(in) + H+(in).
glycine betaine:hydrogen symporter activity
Enables the transfer of tellurite from one side of a membrane to the other. Tellurite is a salt of tellurous acid or an oxide of tellurium which occurs sparingly in tufts of white or yellowish crystals.
tellurite uptake transmembrane transporter activity
tellurite-resistance uptake permease activity
tellurite-resistance uptake transmembrane transporter activity
Enables the transfer of formate from the inside of the cell to the outside of the cell across a membrane.
formate efflux permease activity
Enables the transfer of L-lysine from the inside of the cell to the outside of the cell across a membrane.
L-lysine exporter activity
L-lysine, 2,6-diaminohexanoic acid efflux transmembrane transporter activity
Enables the directed movement of nicotinamide mononucleotide into, out of or within a cell, or between cells. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of d-ribose. It is a constituent of NAD and NADP.
nicotinamide mononucleotide permease activity
nicotinamide ribonucleotide transmembrane transporter activity
Catalysis of the reaction: S-adenosyl-L-methionine + DNA cytosine = S-adenosyl-L-homocysteine + DNA N4-methylcytosine.
DNAmethyltransferase activity
m4C-forming MTase activity
modification methylase activity
N(4)-cytosine-specific DNA methylase activity
N4-cytosine-specific DNA methylase activity
restriction-modification system activity
S-adenosyl-L-methionine:DNA-cytosine 4-N-methyltransferase activity
S-adenosyl-L-methionine:DNA-cytosine N4-methyltransferase activity
Catalysis of the endonucleolytic cleavage of DNA to give double-stranded fragments with terminal 5'-phosphates. ATP hydrolysis is required. Cleavage is dependent on the presence of two copies of a specific recognition sequence in an inverse orientation in the DNA. Cleavage occurs at a specific distance from one of the recognition sites.
type III restriction enzyme activity
The directed movement of copper ions into a cell or organelle.
copper ion uptake
A process that contributes to the delivery of copper ions to a target protein.
intracellular copper delivery
intracellular copper ion delivery
intracellular copper ion transport
A process in which ferric-enterobactin, the iron-bound form of the siderophore enterobactin, is transported into the cell by specific cell surface receptors.
ferric-enterobactin transport
The directed movement of ferric triacetylfusarinine C into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
ferric triacetylfusarinine C transport
The directed movement of aluminum (Al) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
aluminium ion transport
aluminium transport
aluminum ion transport
aluminum transport
The directed movement of mercury (Hg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
mercuric ion transport
mercury transport
The directed movement of antimonite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
antimonite transport
The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
hydrogencarbonate transport
The directed movement of silicates from outside of a cell, across the plasma membrane and into the cytosol. Silicates are the salts of silicic acids, and are usually composed of silicon and oxygen (SiO), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.
silicate transport
silicic acid import
silicic acid transport
silicon uptake
The directed movement of thiosulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
thiosulphate transport
The process in which phosphoglycerate is transported across a lipid bilayer, from one side of a membrane to the other.
phosphoglycerate transport
The directed movement of nucleotide sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
nucleotide-sulphate transport
The directed movement of phosphonates into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).
alkylphosphonate transport
The directed movement of allantoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
allantoin/allantoate transport
The directed movement of allantoin, (2,5-dioxo-4-imidazolidinyl)urea, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
allantoin transmembrane transport
allantoin/allantoate transport
The process in which L-idonate is transported across a lipid bilayer, from one side of a membrane to the other. L-idonate is an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.
L-idonate transport
The directed movement of propionate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
propanoate transport
propionate transport
The directed movement of 3-hydroxyphenyl propanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
3-hydroxyphenyl propionate transport
The process in which shikimate is transported across a lipid bilayer, from one side of a membrane to the other.
shikimate transport
The directed movement of taurine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
taurine transport
The process in which galacturonate is transported across a lipid bilayer, from one side of a membrane to the other.
galacturonate transport
The process in which tartrate is transported across a lipid bilayer, from one side of a membrane to the other.
tartrate transport
The directed movement of urate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
urate transmembrane transport
uric acid transport
The process in which D-ribose is transported across a lipid bilayer, from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.
D-ribose transport
The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.
D-xylose transport
The process in which D-allose is transported across a lipid bilayer, from one side of a membrane to the other. Allose is an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.
allose transmembrane transport
allose transport
The process in which fucose is transported across a lipid bilayer, from one side of a membrane to the other. Fucose is 6-deoxygalactose and has two enantiomers, D-fucose and L-fucose.
fucose transport
The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.
mannose transport
The process in which rhamnose is transported across a lipid bilayer, from one side of a membrane to the other. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.
rhamnose transport
The directed movement of capsular polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Capsular polysaccharides make up the capsule, a protective structure surrounding some species of bacteria and fungi.
capsular-polysaccharide transport
capsule polysaccharide transport
The directed movement of hexuronide across a membrane. Hexuronides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of a hexuronate.
hexuronide transport
The directed movement of glucuronosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucuronosides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of glucuronate.
glucuronide transport
The directed movement of CMP-N-acetylneuraminate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
CMP-N-acetylneuraminate transport
CMP-sialic acid transport
The directed movement of UDP-glucuronic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.
UDP-glucuronic acid transport
The directed movement of UDP-N-acetylgalactosamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
UDP-N-acetylgalactosamine transport
The directed movement of UDP-xylose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.
UDP-xylose transport
The process in which arabitol is transported across a lipid bilayer, from one side of a membrane to the other. Arabitol is the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.
arabinitol transport
arabitol transport
The process in which glycerol-3-phosphate is transported across a membrane. Glycerol-3-phosphate is a phosphoric monoester of glycerol.
glycerol-3-phosphate transport
The directed movement of sorbitol across a membrane. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.
glucitol transport
sorbitol transport
The directed movement of galactitol across a membrane. Galactitol is the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.
galactitol transport
The directed movement of mannitol across a membrane. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.
mannitol transport
The directed movement of peptidoglycan peptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.
murein peptide transport
muropeptide transport
peptidoglycan peptide transport
The directed movement of lipid-linked peptidoglycans into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
lipid-linked murein transport
The directed movement of cytosine, 4-amino-2-hydroxypyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
cytosine transmembrane transport
The process in which a purine nucleoside is transported across a membrane. A purine nucleoside is a purine base covalently bonded to a ribose or deoxyribose sugar.
purine nucleoside membrane transport
purine nucleoside transport
The directed movement of protein-DNA complexes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
DNA-protein complex transport
The directed movement of creatine across a membrane.
creatine transport
The process in which L-ascorbic acid is transported across a lipid bilayer, from one side of a membrane to the other. L-ascorbate, (2R)-2--4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.
L-ascorbate transport
L-ascorbic acid transport
vitamin C transport
The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
vitamin B12 transport
The directed movement of tetracycline from one side of a membrane to the other. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).
tetracyclin transport
tetracycline transport
The directed movement of bicyclomycin across a lipid bilayer, from one side of a membrane to the other. Bicyclomycin (or bicozamycin) is an antibacterial drug often used as a livestock feed additive.
bicyclomycin transport
The directed movement of a long-chain fatty acid into a peroxisome. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.
peroxisomal long-chain fatty acid import
peroxisomal long-chain fatty acid uptake
The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.
lipopolysaccharide export
LPS export
LPS transport
The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.
CoA catabolism
coenzyme A breakdown
coenzyme A catabolism
coenzyme A degradation
The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.
pantothenate anabolism
pantothenate anabolism from 2-oxypantoyl lactone
pantothenate anabolism from valine
pantothenate biosynthesis
pantothenate biosynthesis from 2-oxypantoyl lactone
pantothenate biosynthesis from valine
pantothenate biosynthetic process from 2-dehydropantolactone
pantothenate biosynthetic process from 2-oxypantoyl lactone
pantothenate biosynthetic process from valine
pantothenate formation
pantothenate formation from 2-oxypantoyl lactone
pantothenate formation from valine
pantothenate synthesis
pantothenate synthesis from 2-oxypantoyl lactone
pantothenate synthesis from valine
vitamin B5 biosynthesis
vitamin B5 biosynthetic process
The chemical reactions and pathways resulting in the breakdown of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.
pantothenate breakdown
pantothenate catabolism
pantothenate degradation
vitamin B5 catabolic process
vitamin B5 catabolism
The chemical reactions and pathways resulting in the formation of formate, also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.
formate anabolism
formate biosynthesis
formate formation
formate synthesis
formic acid biosynthesis
formic acid biosynthetic process
The chemical reactions and pathways by which formate is converted to CO2.
formic acid oxidation
The chemical reactions and pathways resulting in the formation of a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.
bis(5\'-nucleosidyl) oligophosphate anabolism
bis(5\'-nucleosidyl) oligophosphate biosynthesis
bis(5\'-nucleosidyl) oligophosphate formation
bis(5\'-nucleosidyl) oligophosphate synthesis
The chemical reactions and pathways resulting in the breakdown of a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.
bis(5\'-nucleosidyl) oligophosphate breakdown
bis(5\'-nucleosidyl) oligophosphate catabolism
bis(5\'-nucleosidyl) oligophosphate degradation
The chemical reactions and pathways resulting in the formation of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.
diadenosine triphosphate anabolism
diadenosine triphosphate biosynthesis
diadenosine triphosphate formation
diadenosine triphosphate synthesis
The chemical reactions and pathways resulting in the breakdown of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.
diadenosine triphosphate breakdown
diadenosine triphosphate catabolism
diadenosine triphosphate degradation
The chemical reactions and pathways resulting in the formation of diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.
diadenosine tetraphosphate anabolism
diadenosine tetraphosphate biosynthesis
diadenosine tetraphosphate formation
diadenosine tetraphosphate synthesis