Estimating species trees : practical and theoretical aspects /
Knowles, L. Lacey.
Kubatko, Laura S.(Laura Salter)
Hoboken, N.J. : Wiley-Blackwell,
c2010.
"Recent computational and modeling advances have produced methods for estimating species trees directly, avoiding the problems and limitations of the traditional phylogenetic paradigm where an estimated gene tree is equated with the history of species divergence"-- Provided by publisher.
Includes bibliographical references and index.
Estimating species trees: an introduction to concepts and models / L. Lacy Knowles and Laura S. Kubatko -- Bayesian estimation of species tress: a practical guide to optimal sampling and analysis / Santiago Castillo-Ramírez ... [et al.] -- Reconstructing concordance trees and testing the coalescent model from genome-wide data sets / Cécile Ané -- Probabilities of gene tree topologies with intraspecific sampling given a species tree / James H. Degnan -- Inference of parsimonious species tree from multilocus data by minimizing deep coalescences / Cuong Than and Luay Nakhleh -- Accomodating hybridization in a multilocus phylogenetic framework / Laura S. Kubatko and Chen Meng -- The influence of hybrid zones on species tree inference in manakins / Robb T. Brumfield and Matthew D. Carling -- Summarizing gene tree incongruence at multiples phylogenetic depths / Karen A. Cranston -- Species tree estimation for complex divergence histories: a case study in Neodiprion sawflies / Catherine R. Linnen -- Sampling strategies for species tree estimation / L. Lacey Knowles -- Developing nuclear sequences for species tree estimation in nonmodel organisms: insights from a case study of Bottae's pocket gopher, Thomomys bottae / Natalia M. Belfiore -- Estimating species relationships and taxon distinctiveness in Sistrurus rattlesnakes using multilocus data / Laura S. Kubatko and H. Lisle Gibbs.
"Recent computational and modeling advances have produced methods for estimating species trees directly, avoiding the problems and limitations of the traditional phylogenetic paradigm where an estimated gene tree is equated with the history of species divergence"-- Provided by publisher.
Trees