dataset: name: gh_mondo embeddings_frame: null embedding_model: name: 'openai:' objects: - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1 label: need to be able to track merged disease entities well - id: https://api.github.com/repos/monarch-initiative/mondo/issues/10 label: issue with Darier's disease subclass of Acrokeratosis Verruciformis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/100 label: 'High Grade B-Cell Lymphoma: MYC / BCL2 / BCL6' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1000 label: obsolete MONDO:0016076 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1001 label: reclassify paralysis terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1002 label: Incorrectly formatted x-refs inherited by EFO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1003 label: Fail curl on error, and sleep travis for 5 minutes. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1004 label: move OMIM equiv axiom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1005 label: moved OMIM xref to new terem - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1006 label: review DiGeorge, velocardiofacial syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1007 label: Issue 1002 - fix dbxrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1008 label: revise superclasses for MONDO:0018982 'Niemann-Pick disease type C' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1009 label: update annotation on MONDO:0005158 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/101 label: 'NTR: Food protein-induced allergic proctocolitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1010 label: 'do not merge: revise superclass for MONDO_0005328' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1011 label: revise label and superclass for MONDO_0002436 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1012 label: revise superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1013 label: '[Revise subclass] MONDO:0006625 altitude sickness' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1014 label: '[Revise subclass] polyp' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1015 label: '[Revise subclass] pseudoxanthoma elasticum (inherited or acquired)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1016 label: '[Revise subclass] dermis disease and breast fibrocystic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1017 label: '[Revise subclass] Campylobacteriosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1018 label: '[NTR]GATA1-Related X-Linked Cytopenia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1019 label: omim_300232, ORPHA:168448, and ORPHA:83629 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/102 label: 'NTR: alpha-gal syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1020 label: update contr.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1021 label: Incorrect Mondo associations are partly responsible for a problem at monarch-ui - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1022 label: monogenic diabetes (MONDO_0015967) is genetic? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1023 label: add superclass assertion to MONDO_0015967 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1024 label: remove superclass assertions for MONDO_0008608 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1025 label: revise synonym annotations for MONDO_0008564 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1026 label: add superclass to MONDO_0005688 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1027 label: revise superclass assertions for MONDO_0005219 and MONDO_0021154 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1028 label: '[Revise subclass] MONDO:0016644, "Logopenic progressive aphasia" = cancer?!' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1029 label: '[Revise subclass] MONDO:0006761 fibromuscular dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/103 label: 'added new term: alpha-gal syndrome. addresses #102' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1030 label: '[Revise subclass] MONDO:0005468 hypotension (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1031 label: Add license to OWL header - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1032 label: '[Revise text def]MONDO:0010432 thrombophilia, X-linked, due to factor 9 defect' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1033 label: Are xrefs supposed to bidirectional? MONDO:0002144 "hyperuricemia" -> ICD9 790.6 "Other abnormal blood chemistry" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1034 label: remove incorrect superclass and annotations for MONDO_0016644 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1035 label: update superclass and label for MONDO_0005468 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1036 label: revise text def and synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1037 label: add new term MONDO:0100089 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1038 label: revise superclass for MONDO_0005079 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1039 label: revise superclass for MONDO_0006625 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/104 label: need to merge terms- amelia cleft lip palate hydrocephalus iris coloboma and ACLH - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1040 label: '[Revise subclass] MONDO:0005203 ''ischemia reperfusion injury''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1041 label: revise label for MONDO:0016644 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1042 label: should MITOCHONDRIAL COMPLEX I DEFICIENCY have subclasses? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1043 label: revise label for MONDO_0000595 'sexual disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1044 label: revise superclass for MONDO_0006761 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1045 label: reclassified 'ischemia reperfusion injury' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1046 label: PXE and mode of inheritance - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1047 label: Minor BBS and PXE changes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1048 label: obsolete MONDO:0009289 glycogen storage disease IC - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1049 label: obsolete MONDO:0005403 neonatal systemic lupus erthematosus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/105 label: Ehlers-Danlos syndrome fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1050 label: relabel MONDO_0001083 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1051 label: remove comment from MONDO_0018065 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1052 label: Is 'KAT6A Syndrome' a synonym for 'autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome' (MONDO:0014558) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1053 label: obsolete MONDO_0000844 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1054 label: Is 'TANGO2 deficiency' actually 'metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration' (MONDO:0014812) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1055 label: add new class MONDO:0100091 inherited pseudoxanthoma elasticum - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1056 label: rename MONDO:0004819 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1057 label: obsolete MONDO:0009834 pancreatic insufficiency, combined exocrine - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1058 label: MONDO:0012231 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1059 label: 'MONDO:0009133: has exact synonym that should be used for MONDO_0024542' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/106 label: added new term Food protein-induced allergic proctocolitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1060 label: Cowden vs PTEN hamartoma tumor syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1061 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1062 label: febrile seizures 8 vs ECA2/epilepsy, childhood absence, susceptibility to, 2/MONDO_001189 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1063 label: '[Revise subclass] MONDO_0012455 /Kleefstra syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1064 label: 'term description correction: Mycobacterium abscessus abscessus infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1065 label: add synonyms to MONDO_0014812 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1066 label: obsolete MONDO:0009148 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1067 label: obsolete MONDO:0022418 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1068 label: remove comment from MONDO_0005094 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1069 label: obsolete MONDO:0007613 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/107 label: Issue 104 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1070 label: add superclass and additional annotations to MONDO:0024308 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1071 label: add axiom linking to ncbitaxon to MONDO_0001973 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1072 label: revise definition for MONDO:0001973 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1073 label: obsolete Leigh disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1074 label: fix def for MONDO:0016249 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1075 label: remove comment from MONDO:0016248 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1076 label: revise superclass for 'Kleefstra syndrome due to 9q34 microdeletion' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1077 label: edit MONDO_0013981 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1078 label: 'Do not merge: obsolete MONDO:0010394' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1079 label: move synonyms to MONDO:0024542 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/108 label: Omenn and SCID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1080 label: edit MONDO_0016063 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1081 label: add synonym to MONDO:0014558 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1082 label: remove comment from MONDO:0016747 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1083 label: 'Typo in label: ''familial Alzheimber disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1084 label: 'NTR: Cannabinoid hyperemesis syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1085 label: Add more metadata to MONDO:0010778 cyclic vomiting syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1086 label: MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 1B and Emery-Dreifuss muscular dystrophy 2, autosomal dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1087 label: MONDO:0007920 has a wrong xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1088 label: '[Obsolete]neurodevelopmental disorder with brain, liver, and lung abnormalities' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1089 label: COL4A1 or COL4A2-related cerebral small vessel disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/109 label: 'Fix SCID vs nonSCID issues, #108' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1090 label: add new term MONDO:0100094 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1091 label: add axiom to MONDO_0010778 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1092 label: add metadata to MONDO:0010778 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1093 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1094 label: revise xrefs for Meige disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1095 label: obsolete MONDO:0012647 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1096 label: revise synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1097 label: add new term MONDO:0100095 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1098 label: Should hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features be retained? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1099 label: rename MONDO:0009796 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/11 label: 'Issue with kidney stone ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/110 label: Various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1100 label: remove xrefs to EFO:0004124 from 'Darier disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1101 label: a wrong "basic PropertyValue" in MONDO:0015797 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1102 label: Issue 141 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1103 label: fix typo in MONDO_0014761 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1104 label: fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1105 label: ORDO terms to be added to MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1106 label: '[NTR] SELENON-related myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1107 label: Align with ICD 11 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1108 label: need a QC check for proxy merges - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1109 label: revise text def for MONDO:0001973 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/111 label: Merge? Filippi syndrome and Scott Bryant Graham syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1110 label: added subclassOf axiom to MONDO_0100095 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1111 label: relabel MONDO:0014510 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1112 label: Rename EMARDD Syndrome to MEGF10-Related Myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1113 label: representation of disorders characteristic of an ethnic group - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1114 label: Fetal akinesia deformation sequence vs. Pena-Shokeir syndrome type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1115 label: Remove synonym "lower grade glioma" from MONDO_0005499 brain glioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1116 label: 'question: spinocerebellar ataxia and cerebellar ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1117 label: Request to rename MONDO:0005775 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1118 label: add a SOP to manual for adding new gene-centric diseases, how we relate these to omim - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1119 label: "revise xref to MONDO:obsoleteEquivalent for MONDO_0010275 'spondyloe\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/112 label: 'addresses #79' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1120 label: '[Revise text def] for MONDO:0011581 (arrhythmogenic cardiomyopathy with holly hair and keratoderma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1121 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1122 label: 'Do not merge: Coronavirus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1123 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1124 label: revise logical def for MONDO_0022529 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1125 label: revise def for MONDO:0011581 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1126 label: relabel MONDO:0005775 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1127 label: revise label and add text def for MONDO:0013731 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1128 label: remove synonym and comment from MONDO:0005499 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1129 label: revise annotations on MONDO:0004225 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/113 label: '"Parkinson disease, late-onset" and "late onset Parkinson disease"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1130 label: add xref to 'fetal akinesia deformation sequence' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1131 label: obsolete MONDO:0012372 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1132 label: obsolete MONDO:0007065 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1133 label: obsolete MONDO:0008033 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1134 label: Request to relabel MONDO:0010898 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1135 label: obsolete MONDO:0060722 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1136 label: add new term MONDO:0100100 SELENON-related myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1137 label: relabel and revise def for MONDO:0010898 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1138 label: add xref to 'autosomal recessive cerebellar ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1139 label: Issue 1114b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/114 label: vascular anomalies, malformations and hemangiomas - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1140 label: fix typo in phenylketonuria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1141 label: obsolete MONDO:0011865 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1142 label: Revise definition for ichthyosis follicularis-alopecia-photophobia syndrome[Revise text def] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1143 label: '[Revise subclass] MONDO:0003778 primary immunodeficiency disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1144 label: Request to Relabel MONDO:0010624 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1145 label: Two terms with same exact match - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1146 label: '[Obsolete] MONDO:0015597 dup of MONDO:0002985?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1147 label: MONDO:0010892 and MONDO:0000863 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1148 label: Incorporate ICDO mappings from progenetix - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1149 label: MONDO:0005812 'influenza' xrefs to (now) obsolete EFO term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/115 label: ensure childhood epilepsy is complete - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1150 label: '[NTR] New term request: Neonatal epileptic encephalopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1151 label: '[NTR] Non-neonatal early infantile epileptic encephalopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1152 label: '[Revise text def] MONDO:0018588 ALECT2 amyloidosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1153 label: '[Obsolete] ''mucoepidermoid tumor''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1154 label: revise def for MONDO:0010624 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1155 label: revise classification of 'primary immunodeficiency disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1156 label: Issue 1145 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1157 label: relabel MONDO:0010624 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1158 label: remove xref on influenza - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1159 label: add new term MONDO:0100106 neonatal epileptic encephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/116 label: 'WIP - addresses #115' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1160 label: add new term MONDO:0100107 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1161 label: add def and synonym to MONDO:0018588 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1162 label: MONDO_0018273 - add term in UMLS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1163 label: Add syn - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1164 label: Monogenic SLE and SLEB16 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1165 label: SLEB16 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1166 label: normalized order - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1167 label: X-linked Ehlers-Danlos syndrome (MONDO_0010586 ) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1168 label: '[Revise subclass] MONDO:0020135 non-syndromic pontocerebellar hypoplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1169 label: '[NTR] TPM3-Related Myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/117 label: MONDO stats for R24 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1170 label: revise xref to MONDO:obsoleteEquivalent for MONDO_0010275 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1171 label: add new term MONDO:0100108 TPM3-related myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1172 label: Remove comment from MONDO:0005286 palatal neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1173 label: '[NTR] Placeholder ticket for OMIM diseases absent from Mondo' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1174 label: add synonyms for Ehlers-Danlos syndrome? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1175 label: MONDO:0018797 genetic cardiac malformation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1176 label: Remove non-existent HP xrefs (1) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1177 label: Remove non-existent HP ID (2) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1178 label: Remove obsolete HP ID xref (1) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1179 label: Remove obsolete HP ID xref (2) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/118 label: ORPHA vs Orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1180 label: Remove obsolete HP ID xref (3) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1181 label: hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1182 label: Issue 1174 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1183 label: remove xref to obsoleted HPO term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1184 label: replace xref for MONDO_0009813 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1185 label: revise xref for '3-hydroxyacyl-CoA dehydrogenase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1186 label: relabel MONDO_0020135 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1187 label: remove comment from 'palatal neoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1188 label: '[NTR] Adenovirus renal infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1189 label: '[Revise logical def] MONDO:0005267 heart disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/119 label: Metabolic - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1190 label: relabel MONDO:0018797 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1191 label: add new term MONDO:0100110 adenovirus renal infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1192 label: revise logical def for 'heart disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1193 label: '[Revise subclass]MONDO:0005508 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1194 label: obsolete MONDO:0000024 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1195 label: remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1196 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1197 label: update xref to OMM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1198 label: revise subclass for 'congenital bile acid synthesis defect 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1199 label: Generate consistency report for disease-gene associations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/12 label: remove confidence annotation from Paramedian nasal cleft - id: https://api.github.com/repos/monarch-initiative/mondo/issues/120 label: 'DO NOT MERGE: making acquired disjointWith genetic-inherited' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1200 label: Cancer vs tumor x-ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1201 label: acro-renal-ocular syndrome and acrorenoocular syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1202 label: Baraitser Rodeck Garner syndrome and craniosynostosis-mental retardation-clefting syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1203 label: revise def for MONDO:0020135 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1204 label: add new term MONDO:0100110 adenovirus renal infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1205 label: revise synonyms to 'heart disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1206 label: revise def for MONDO:0005267 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1207 label: 'map Mondo cyst terms to HPO ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1208 label: evaluate results from OBO dashboard - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1209 label: add MONDO:0100096 2019 novel coronavirus infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/121 label: nutritional disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1210 label: relabel MONDO_0007386 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1211 label: Create robot-commands.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1212 label: Update imports.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1213 label: '[Revise subclass] MONDO:0043291 rokitansky-aschoff sinuses of the gallbladder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1214 label: '[Revise subclass] MONDO:0015943 eosinophilic granulomatosis with polyangiitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1215 label: Taxon repair - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1216 label: add synonym to '2019 novel coronavirus infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1217 label: Add Monarch App backlinks to Mondo IDs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1218 label: Addison disease and chronic primary adrenal insufficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1219 label: Create workflow-notes.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/122 label: Behcet's syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1220 label: Update regenerate-import.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1221 label: experiment with making infectious disease and syndrome disjoint - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1222 label: 'further IRID edits, see #203' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1224 label: "[Obsolete] MONDO_0020700\tmicrocephaly, short stature, and impaired glucose\ \ metabolism" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1225 label: '[Obsolete] MONDO_0020310 familial focal epilepsy with variable foci' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1226 label: obsolete Brown-Vialetto-van Laere syndrome- Issue 127 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1227 label: "[Obsolete] MONDO_0012649\tFTSD" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1228 label: '[Obsolete] MONDO_0045022 disorder of organic acid metabolism' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1229 label: obsolete MONDO_0010530 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/123 label: Correction to term inherited genetic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1230 label: 'question: MONDO_0018925 familial or sporadic hemiplegic migraine' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1231 label: "[Obsolete] MONDO_0007291\tfamilial cerebral cavernous malformation" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1232 label: "[Obsolete] MONDO_0000841\tmetaphyseal dysplasia" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1233 label: '[Obsolete] MONDO_0010892 mitochondrial myopathy and sideroblastic anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1234 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1235 label: remove xref from 'keratoconjunctivitis sicca' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1236 label: '[Obsolete] MONDO_0006818 ''keratoconjunctivitis sicca''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1237 label: "[Obsolete] MONDO_0014624\tBrown syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1238 label: add synonym to '2019 novel coronavirus infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1239 label: Fix xrefs to MTHU - id: https://api.github.com/repos/monarch-initiative/mondo/issues/124 label: Revert "Metabolic" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1240 label: revise comment for MONDO:0009148 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1241 label: 'revise superclasses: MONDO:0019170 ''polyarteritis nodosa'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1242 label: '[NTR] ACBD5 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1243 label: Incorrect definition property for "extranodal nasal NK/T cell lymphoma" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1244 label: review MedGen-Mondo mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1245 label: add new term MONDO_0100112 'ACBD5 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1246 label: remove superclasses from 'polyarteritis nodosa' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1247 label: obsolete cystic lymphangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1248 label: obsolete Epstein syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1249 label: remove comment from MONDO_0018045 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/125 label: 'split: Morvan and HSAN2A' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1250 label: "obsolete congenital vitamin K-dependent coagulation factors combined \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1251 label: 'ready to merge: fix duplicate definitions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1252 label: '[Obsolete] prostate carcinoma in situ [MONDO:0004623]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1253 label: '[Obsolete] MONDO_0002346 ''malignant histiocytic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1254 label: '[Obsolete] MONDO_0022463 ''anophthalmia megalocornea cardiopathy skeletal anomalies''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1255 label: '[Obsolete] MONDO_0003703 ''uterine corpus leiomyomatosis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1256 label: '[Obsolete] MONDO_0005457 acute stress reaction''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1257 label: '[Obsolete] MONDO_0006667 B- and T-cell mixed leukemia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1258 label: "[Obsolete] MONDO_0003161\tbenign ependymoma'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1259 label: '[Obsolete] halo nevus or halo nevi' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/126 label: Merge MGUS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1260 label: pulmonary valve stenosis vs. valvular pulmonary stenosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1261 label: "[Obsolete] MONDO_0003106\tverrucous keratotic hemangioma'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1262 label: '[Obsolete] MONDO_0004845 aphthous stomatitis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1263 label: "[Obsolete] MONDO_0003195\tperitoneal serous adenocarcinoma'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1264 label: "[Obsolete] MONDO_0001676\terythropoietic protoporphyria'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1265 label: '[Obsolete] MONDO_0002835 papillary transitional carcinoma''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1266 label: 'revise def: MONDO_0002655 cutaneous Paget disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1267 label: '[Obsolete] MONDO_0004300 intracortical osteogenic sarcoma''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1268 label: "[Obsolete] MONDO_0003119\thistiocytoid hemangioma'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1269 label: '[Obsolete]continuous muscle fiber activity hereditary, MONDO_0022857' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/127 label: FAZIO-LONDE DISEASE vs Brown-Vialetto-van Laere syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1270 label: "[Obsolete] MONDO_0006440\tsystemic mastocytosis with associated clonal hematological\ \ non-mast-cell lineage disease'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1271 label: review of OMIMPS PS256040 and its children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1272 label: '[Obsolete]Patau/Trisomy 13' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1273 label: '[Obsolete] MONDO_0003553 ''ampulla of vater adenosquamous carcinoma''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1274 label: '[Obsolete] MONDO_0003500 squamous cell bile duct carcinoma''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1275 label: MONDO_0003549 adenosquamous bile duct carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1276 label: MONDO_0006060 nasopharyngeal squamous cell carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1277 label: '[Obsolete] MONDO_0005948 Ritter disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1278 label: '[revise def] MONDO_0004990 breast tumor luminal A or B''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1279 label: '[Obsolete] MONDO_0006209 ''fibroblastic neoplasm''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/128 label: WIP Chris - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1280 label: MONDO_0012205 and ORPHA:228169 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1281 label: revise annotations for MONDO:0012205 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1282 label: add related synonym to MONDO:0045057 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1283 label: update OMIM and Orphanet ingest - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1284 label: obsolete MONDO_0005285 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1285 label: update def, syns and add xref to canker sore (MONDO:0005318) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1286 label: obsolete MONDO:0006860 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1287 label: update def for MONDO:0003500 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1288 label: revise synonyms for MONDO:0003120 and MONDO:0003787 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1289 label: revise def for MONDO:0006386 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/129 label: propagate NCIT_P334 (ICD-0) property to xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1290 label: "revise superclass assertions for 'eosinophilic granulomatosis with po\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1291 label: obsolete MONDO:0006818 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1292 label: add instructions on how to generate robot report to dev guide - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1293 label: update xref to OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1294 label: obsolete MONDO:0002364 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1295 label: add additional synonyms to covid-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1296 label: 'Do not merge: add link to github discussion' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1297 label: obsolete MONDO:0022263 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1298 label: obsolete MONDO:0011769 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1299 label: obsolete MONDO:0023097 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/13 label: question about Orphanet_2190 Congenital hydronephrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/130 label: 'review: psychiatric and mental disorders' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1300 label: 'Ready to merge: obsolete MONDO:0024267' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1301 label: obsolete MONDO:0015078 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1302 label: obsolete MONDO_0001058 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1303 label: add def to MONDO:0002840 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1304 label: '[Revise subclass] Alzheimer disease 2 (MONDO_0007089) no early-onset AD' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1305 label: '[Obsolete]MONDO_0007796/hypoparathyroidism, familial isolated' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1306 label: revise subclasss of Alzheimer disease 2 (MONDO_0007089) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1307 label: obsolete MONDO:0015078 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1308 label: remove comment from MONDO:0016156 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1309 label: obsolete MONDO_0018412 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/131 label: 'consider merge: adenosine deaminase, elevated, hemolytic anemia due to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1310 label: relabel and add text def to MONDO:0020395 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1311 label: update label for MONDO_0019097 and children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1312 label: MONDO:0018838_Brain Malformation Group - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1313 label: relabel MONDO:0018838 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1314 label: update def for MONDO:0003490 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1315 label: obsolete MONDO:0016569 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1316 label: remove comment from MONDO:0018708 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1317 label: 'add new term: MONDO:0100113' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1318 label: add new term MONDO:0100114 and add syn - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1319 label: remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/132 label: Synonym Type ABBREVIATION is not declared in obo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1320 label: add new term MONDO:0100115 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1321 label: relabel MONDO:0012234 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1322 label: relabel terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1323 label: revise subclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1324 label: revise superclass for 'Aicardi syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1325 label: add def to MONDO:0043291 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1326 label: revise labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1327 label: '[Obsolete] MONDO_0021910 ''aplasia cutis myopia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1328 label: fix def for MONDO:0011891 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1329 label: '[Obsolete] MONDO_0012234 ''LI-Fraumeni syndrome 3''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/133 label: acquired vs constitutional hemolytic uremia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1330 label: remove comment from MONDO:0040679 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1331 label: revise def for MONDO:0015990 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1332 label: 'Do not merge: add new terms/synonyms and xrefs related to COVID-19' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1333 label: '[Obsolete]Orphanet_502434 vs OMIM_617635' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1334 label: '[Obsolete]eagle syndrome or elongated styloid process syndrome ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1335 label: '[Obsolete]Aksu von Stockhausen syndrome vs aksu von stockhausen syndrom' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1336 label: add superclass of assertions to Potter sequence - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1337 label: reclassify 'rare maxillo-facial surgical disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1338 label: obsolete MONDO:0021971 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1339 label: Update ordo/omim alignments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/134 label: Check for all cryptic (hidden GCI) inborn vs acquired assumptions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1340 label: relabel COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1341 label: '[NTR] Should we add subclasses of COVID-19?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1342 label: Add design pattern for 'primary X' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1343 label: 'WIP: ORDO NTs' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1344 label: isolated trigonocephaly and PS190440 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1345 label: mitochondrial complex III deficiency - introduce subtypes for nuclear vs mt? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1346 label: postaxial polydactyly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1347 label: nasu-hakola - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1348 label: split juvenile myoclonic epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1349 label: Issue 1339 ps - id: https://api.github.com/repos/monarch-initiative/mondo/issues/135 label: early-onset epilepsy-intellectual disability-brain anomalies syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1350 label: Nv fix 2020 03 27b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1351 label: dystonia from GeneReviews, take 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1352 label: add xrefs to COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1353 label: move xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1354 label: '[NTR] MERS' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1355 label: '[Revise subclass] ''severe acute respiratory syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1356 label: 'Documentation: annotation usage' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1357 label: 'Documentation: need a description of the type of knowledge that Mondo is capturing' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1358 label: 'Documentation: Obsoleting classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1359 label: '[NTR] subclasses of ARDS ?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/136 label: neuroblastoma definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1360 label: 'Relabel: adult respiratory distress syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1361 label: relabel MONDO_0007386 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1362 label: remove xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1363 label: Please remove xref EFO:0000378 from MONDO:0005010 coronary artery disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1364 label: '[Obsolete] MONDO_0001046 ''imperforate anus''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1365 label: revise superclass for 'severe acute respiratory syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1366 label: remove xrefs to MTHU - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1367 label: Nv 2020 04 03b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1368 label: MAUMENEE CORNEAL DYSTROPHY - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1369 label: remove xrefs to OMIM:MTHU IDs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/137 label: Make cutis hyperelastica a deprecated synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1370 label: 'add new term: middle east respiratory syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1371 label: question about imports.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1372 label: '[Obsolete] Salt and pepper developmental regression syndrome, also known as Amish infantile epilepsy syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1373 label: '[Revise logical def] MONDO:0100096 ''2019 novel coronavirus infection'' and anosmia/ageusia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1374 label: 'Ready to merge: add phenotype features to COVID-19' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1375 label: 'WIP: coronavirus fixes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1376 label: Merge MYH-9 related disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1377 label: relabel Native American Myopathy and Athabaskan brainstem dysgenesis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1378 label: MONDO:0000148 'pulmonary fibrosis and/or bone marrow failure, Telomere-related' and children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1379 label: MONDO_0033766 is declared in the current owl file without any content - id: https://api.github.com/repos/monarch-initiative/mondo/issues/138 label: 'revised label and def, addresses #122' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1380 label: update label for MONDO:0010624 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1381 label: "obsolete SM-AHNMD and systemic mastocytosis with associated clonal he\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1382 label: "revise label for 'pulmonary fibrosis and/or bone marrow failure, telo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1383 label: relabel MONDO:0009722 and MONDO:0011099 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1384 label: remove xref to 'coronary artery disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1385 label: 'WIP: Updated SCALA code to run in new ODK' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1386 label: revise superclass assertion for 'viral eye infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1387 label: "obsolete anophthalmia-megalocornea-cardiopathy-skeletal anomalies syn\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1388 label: obsolete prostate carcinoma in situ - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1389 label: remove comment from recombinase activating gene 1 deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/139 label: 'Question about GARD term: amyloidosis nodular localized cutaneous''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1390 label: obsolete FTSD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1391 label: revise synonym for 'cerebral cavernous malformation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1392 label: MONDO:0008630 wrong heritability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1393 label: move synonym to 'arthrogryposis, distal, type 1A' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1394 label: '[Obsolete]nonsyndromic congenital nail disorder 10' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1395 label: osteoarthritis susceptibility exact matching osteoarthritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1396 label: obsolete benign ependymoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1397 label: remove superclass from 'primary ciliary dyskinesia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1398 label: obsolete epilepsy, familial focal, with variable foci - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1399 label: obsolete metaphyseal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/14 label: question about Orphanet_451612 Familial congenital nasolacrimal duct obstruction - id: https://api.github.com/repos/monarch-initiative/mondo/issues/140 label: question about MONDO_0022460 anophthalmia cleft lip palate hypothalamic disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1400 label: obsolete mitochondrial myopathy and sideroblastic anemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1401 label: obsolete Brown's tendon sheath syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1402 label: obsolete continuous muscle fiber activity hereditary - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1403 label: fatco and case fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1404 label: '[Revise subclass] Human prion disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1405 label: "[Obsolete] look for terms that are tagged \u2018obsoletion candidate\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1406 label: "add synonyms to 'systemic mastocytosis with an associated clonal hema\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1407 label: 'MONDO:0005550 ''infectious disease'': suggested synonyms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1408 label: add synonyms to 'infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1409 label: '[Revise subclass] MONDO:0006687 ''burning mouth syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/141 label: Need help with GARD definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1410 label: exclude superclass from 'burning mouth syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1411 label: obsolete halo nevi - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1412 label: obsolete MONDO:0007324 chorea - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1413 label: obsolete nephrosialidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1414 label: obsolete benign neurilemmoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1415 label: 'Do not merge: obsolete hypoparathyroidism, familial isolated' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1416 label: obsolete aplasia cutis myopia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1417 label: obsolete LFS3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1418 label: obsolete elongated styloid process syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1419 label: "obsolete STAG1-related intellectual disability-facial dysmorphism-gas\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/142 label: added defs to gard_subset terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1420 label: obsolete aksu von stockhausen syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1421 label: obsolete Patau syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1422 label: obsolete Klippel-Trenaunay syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1423 label: obsolete verrucous keratotic hemangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1424 label: obsolete Asrar Facharzt Haque syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1425 label: remove comment and fix typo in def - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1426 label: obsolete histiocytoid hemangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1427 label: "remove comment from Bernard-Soulier syndrome, type A2, autosomal domi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1428 label: remove comment from MONDO:0022173 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1429 label: obsolete pustulosis of palm and sole - id: https://api.github.com/repos/monarch-initiative/mondo/issues/143 label: 'question about def for: aplasia cutis myopia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1430 label: obsolete erythropoietic protoporphyria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1431 label: obsolete papillary transitional carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1432 label: obsolete cutaneous Paget disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1433 label: obsolete intracortical osteogenic sarcoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1434 label: obsolete histiocytoid hemangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1435 label: obsolete adenosquamous bile duct carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1436 label: obsolete nasopharyngeal carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1437 label: obsolete Ritter disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1438 label: obsolete breast tumor luminal A or B - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1439 label: '[Revise text def] MONDO:0005249 pneumonia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/144 label: 'Ready to merge: Envo 583' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1440 label: 'axiomatize chromosomal diseases with monochrom ontology ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1441 label: obsolete labyrinthine dysfunction - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1442 label: revise text def for pneumonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1443 label: Schuurs-Hoeijmakers Syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1444 label: '[NTR] P5CS Deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1445 label: relabel MONDO:0014006 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1446 label: '[NTR] MYPN-related myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1447 label: relabel MONDO_0010107 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1448 label: Saul-Wilson syndrome merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1449 label: '[Revise logical def] anodontia vs. Anodontia of permanent dentition' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/145 label: 'removing envo mireot #144' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1450 label: MONDO:0015194 and link to OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1451 label: Which is the best release artefact for display in tree browsers? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1452 label: '[Revise logical def] Some gene/protein records from OMIM are being treated as disorders' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1453 label: '[NTR] SCN4-related myopathy, autosomal recessive' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1454 label: update MONDO_0006676 beriberi - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1455 label: Add Jenkins check for equivalence to a leaf OMIM and an OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1456 label: relabel MONDO:0008319 protoporphyria, erythropoietic - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1457 label: 'Ready to merge: obsolete ''nasopharyngeal squamous cell carcinoma'' and create new term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1458 label: fix casing in LI-Fraumeni syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1459 label: fixed casing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/146 label: The 2016 revision of the World Health Organization classification of lymphoid neoplasms. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1460 label: '[Revise subclass] ''staphylococcal scalded skin syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1461 label: remove superclass on 'staphylococcal scalded skin syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1462 label: 'split term: ''X-linked nonsyndromic deafness''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1463 label: Merge MONDO:0023310 (hemiplegic migraine) + MONDO:0018925 (familial or sporadic hemiplegic migraine) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1464 label: Update obsoletion-candidates.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1465 label: update omim xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1466 label: 'split: autosomal dominant non-syndromic intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1467 label: '[Revise subclass] MONDO:0025481 zoonoses' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1468 label: '[NTR] vector-borne disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1469 label: revise xref for MONDO_0005575 'colorectal cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/147 label: constitutional xps - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1470 label: update annotations for MONDO:0025481 zoonoses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1471 label: "WIP: split out class MONDO:0100119 intellectual disability, autosomal domi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1472 label: 'add new term ''vector-borne disease'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1473 label: "Ready to merge: add new term MONDO:0100121 SCN4-related myopathy, autosomal\ \ rece\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1474 label: remove comment from MONDO:0006073 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1475 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1476 label: fix reference to obsoleted HPO class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1477 label: remove comment from MONDO:0006073 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1478 label: obsolete germ cell and embryonal cancer - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1479 label: revise def for COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/148 label: About the value of xmlns:obo in the header - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1480 label: obsolete lymphoblastic leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1481 label: add new NCBI taxon import files - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1482 label: '[Revise subclass] MONDO:0005328 eye disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1483 label: inborn vs inherited - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1484 label: large number of inferences for purine/pyrimidine metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1485 label: inborn mitochondrial metabolism disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1486 label: cerebral degeneration - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1487 label: Terms without definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1488 label: drop in numbers for autosomal dominent and recessive after migration (DO>MONDO) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1489 label: '[Obsolete] tuberous sclerosis complex MONDO:0019341' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/149 label: 'Retinoblastoma: hereditary or non hereditary' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1490 label: review of Zellweger spectrum disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1491 label: '[NTR] GTP cyclohydrolase I deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1492 label: Missing parent (MP) argininosuccinic aciduria MONDO:0008815 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1493 label: MP hyperargininemia /argininosuccinic aciduria / ornithine translocase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1494 label: Large number of false positives for carbohydrate metabolic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1495 label: Large drop in monogenic diseases after DO-MOndo mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1496 label: Nicole's to do's from Mondo meeting 05/08/20 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1497 label: update halo nevus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1498 label: '[Obsolete] ''neurodegenerative disease with dementia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1499 label: ROBOT report - need to check that we have no clashes with HPO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/15 label: question about Adrenocortical carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/150 label: Missing Orphanet Diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1500 label: update terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1501 label: MONDO:0020184 parentage - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1502 label: genetic hair anomaly (MONDO:0021027) parentage - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1503 label: congenital nonspherocytic hemolytic anemia (MONDO:0006506) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1504 label: obsolete breast fibroadenosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1505 label: add superclass to 'congenital nonspherocytic hemolytic anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1506 label: missing cancer inheritance - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1507 label: '[NTR] chilblain lupus erythematosus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1508 label: Hallucinogen-Persisting Perception Disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1509 label: 'missing parent: hereditary nonpolyposis colon cancer (MONDO:0018630)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/151 label: Anti-NMDA Receptor Encephalitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1510 label: MP hyperglycinuria (disease) (MONDO:0007677) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1511 label: congenital factor VII deficiency MONDO:0009211 vs factor VII deficiency MONDO:0002244 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1512 label: Need New MONDO ID for NAA10-related syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1513 label: add new term MONDO:0100124 NAA10-related syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1514 label: add new term MONDO:0100125 hallucinogen-persisting perception disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1515 label: revise xrefs for 'factor VII deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1516 label: 'fixes to dravet synfrome:' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1517 label: add def and syns to MONDO:0019557 chilblain lupus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1518 label: MIS-C [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1519 label: MP leukodystrophy (MONDO:0019046) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/152 label: familial isolated restrictive cardiomyopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1520 label: '[Revise subclass] Fix is_a overloading (action items from Mondo call)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1521 label: '[Obsolete] MONDO_0017678 ''disease with punctate palmoplantar keratoderma as a major feature''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1522 label: '[Obsolete] MONDO_0017820 ''disease with Cushing syndrome as a major feature''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1523 label: 'Revise superclasses ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1524 label: '[Obsolete] ''neoplastic disease or syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1525 label: parentage spondyloepimetaphyseal dysplasia with multiple dislocations (MONDO:0011335) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1527 label: mitochondrial DNA depletion syndrome (MONDO:0018158) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1528 label: obsolete hemiplegic migraine - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1529 label: revise labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/153 label: ORDO constitutional vs acquired alplastic anemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1530 label: exclude superclass from 'mitochondrial DNA depletion syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1531 label: add def and exclude superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1532 label: need check - no hierarchical relation between gene-level diseases in MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1533 label: add new term P5CS deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1534 label: revise label for MONDO:0015023 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1535 label: childhood absence epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1536 label: 'split term: Imerslund-Grasbeck syndrome MONDO:0009853 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1537 label: obsolete nonsyndromic congenital nail disorder 10 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1538 label: Create vectorBorneDisease.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1539 label: Create primary - id: https://api.github.com/repos/monarch-initiative/mondo/issues/154 label: Genetic hypertension is_a renal disease? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1540 label: exclude subclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1541 label: add superclass to 'argininosuccinic aciduria' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1542 label: "added 'urea cycle disorder' as a parent of 'inborn disorder of urea c\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1543 label: reclassify 'rare eyebrow/eyelashes anomaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1544 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1545 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1546 label: Cornelia de Lange syndrome, not an eye disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1547 label: ' autism (disease) MONDO:0005260 missing MeSH ID' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1548 label: pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1 (MONDO:0013878) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1549 label: Use current HGNC names in definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/155 label: 'ORDO: Text definitions sometimes truncated' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1550 label: ' embedded linking to other terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1551 label: 'split term: arachnoid cyst' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1552 label: '[Merge] mitochondrial complex III deficiency nuclear type 1 into parent' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1553 label: Missing parent question (urea cycle terms) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1554 label: '[Revise text def] X-linked sideroblastic anemia with ataxia (MONDO:0010524)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1555 label: COFS syndrome (MONDO:0008926) is not a Cockayne's syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1556 label: remove syn from 'hallucinogen-persisting perception disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1557 label: ' Nephronophthisis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1558 label: revise def for MONDO:0009872 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1559 label: revise def of X-linked sideroblastic anemia with ataxia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/156 label: loose classes? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1560 label: exclude superclass for 'COFS syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1561 label: revise superclass and add superclass axiom to 'MEHMO syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1562 label: add superclass to 'hyperglycinuria (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1563 label: add new term MONDO:0100127 Imerslund-Grasbeck syndrome 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1564 label: exclude subclasses from 'Cornelia de Lange syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1565 label: add superclass to leukodystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1566 label: fatal infantile encephalocardiomyopathy ancestry - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1567 label: Question progeroid and premature ageing, difference? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1568 label: typo in def Zellweger syndrome (MONDO:0019609) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1569 label: MONDO:0009282 multiple acyl-CoA dehydrogenase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/157 label: 'NTR: idiopathic anaphylaxis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1570 label: typo in metabolic disease (MONDO:0005066) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1571 label: '[NTR/Uner Tan Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1572 label: urea cycle related - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1573 label: Mitochondrial pyruvate carrier deficiency missing parents and definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1574 label: hypertelorism (disease) MONDO:0007778 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1575 label: maternally-inherited spastic paraplegia synonym, def, parent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1576 label: '[Obsolete] ''cytokine deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1577 label: '[NTR/gene] Succinate-CoA ligase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1578 label: review subclasses of disease by subcellular system affected - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1579 label: '[Merge] MONDO:0003436 lung oat cell carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/158 label: 'NTR: venom hypersensitivty' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1580 label: typo, respiratory - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1581 label: mitochondrial complex III deficiency nuclear type 1 MONDO:0007415 def query - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1582 label: Description and definition don't match. dyskeratosis congenita, autosomal recessive 1 (MONDO:0009136) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1583 label: 'Missing parent: constitutional mismatch repair deficiency syndrome (MONDO:0010159)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1584 label: dyskeratosis congenita (MONDO:0015780) parentage - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1585 label: '[NTR] X-linked recessive mitochondrial myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1586 label: '[NTR] Hydatidiform mole, recurrent, 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1587 label: 'Question: genetic recurrent myoglobinuria (MONDO:0020504) parentage query' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1588 label: parentage motor neuron disease (MONDO:0020128) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1589 label: inborn errors or metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/159 label: Commit an export of precise logical equiv calls - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1590 label: '[NTR] COVID 19 illness level terms in NIH treatment guidance' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1591 label: revise def for MONDO:0019052 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1592 label: fix typo in MONDO:0000732 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1593 label: '[Revise subclass] hydatidiform mole, recurrent, 2 subclass of coronary artery disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1594 label: '[Obsolete] ''alpha-2 deficient collagen disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1595 label: '[Revise text def] remove (see this term)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1596 label: '[Merge] MONDO_0022939 ''deafness hyperuricemia neurologic ataxia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1597 label: UMLS CUI xrefs that start with "CN" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1598 label: update the taxon ID for COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1599 label: add def to mitochondrial complex III deficiency nuclear type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/16 label: question about Orphanet_1223 Balantidiasis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/160 label: EFO classifies CERVICAL RIB as reproductive disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1600 label: 'Request: add Mondo release product for tree viewers' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1601 label: 'MeSH: C537666 is not a recognised xref for Becker muscular dystrophy (MONDO:0010311) ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1602 label: '[NTR] coinfection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1604 label: move xref for OMIM:607208 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1605 label: updated xref for 'Becker muscular dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1606 label: "Relabel children under 'genetic cardiac malformation' as \u2018(disease)\u2019\ \ and add has features some Phenotype" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1607 label: add new term MONDO:0100128 coinfection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1608 label: "add def and parent too MONDO:0013877 mitochondrial pyruvate carrier d\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1609 label: 'split term: create MONDO:0100129 intracranial arachoid cyst' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/161 label: population frequency from Ordo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1611 label: hydatiform mole, missing parent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1612 label: '[Revise subclass]hereditary methemoglobinemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1613 label: '[awaiting decision] exclude subclass Of axiom for ''hydatidiform mole''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1614 label: '[Merge] MONDO_0006248 ''hydatidiform mole'' with MONDO:0018944 ''gestational trophoblastic neoplasm''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1615 label: obsolete peritoneal serous papillary adenocarcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1616 label: reclassify 'methemoglobinemia, alpha type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1617 label: "split adult acute respiratory distress syndrome from acute respirator\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1618 label: Graham little-Piccardi-Lassueur syndrome MONDO:0018858 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1619 label: fix logical defs for COVID-19 and SARS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/162 label: Potentially dubious type 2 diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1620 label: "add new term MONDO:0100132 intrahepatic bile duct adenosquamous carci\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1621 label: add new terms MONDO:0100133 mitochondrial complex I deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1622 label: exclude superclasses from Dravet syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1623 label: '[Merge] MONDO:0044646 and MONDO:0014964' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1624 label: '[Revise subclass] Saldino-Mainzer syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1625 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1626 label: add equiv axioms to children of 'acute respiratory distress syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1627 label: missing parentage Muir-Torre syndrome (MONDO:0008018) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1628 label: '[Merge] hereditary angioedema type 3 AND hereditary angioedema with normal c1inh' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1629 label: Refresh OMIM ingest - id: https://api.github.com/repos/monarch-initiative/mondo/issues/163 label: Camurati-Engelmann disease types 1 and 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1630 label: Typo in label of MONDO:0020791 corneal dystrophy, meesmann, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1631 label: '[NTR] telomere syndromes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1632 label: add to FAQ page on Mondo website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1633 label: '[Obsolete]Epstein-Barr virus insertion site 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1634 label: OMIMPS eqs for MONDO:0008824 and MONDO:0015244 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1635 label: MONDO:0013521 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1636 label: '[NTR] Fanconia anemia complementation group M' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1637 label: Dravet syndrome revisions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1638 label: add new class MONDO:0100135 Dravet syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1639 label: '[NTR] children of ''extrinsic allergic alveolitis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/164 label: 'add Genetics Home Reference ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1640 label: QC script- add note to epilepsy children that these classes should be classified elsewhere - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1641 label: add obsoletion candidate tags to age of onset epilepsy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1642 label: '[Revise text def] ''syndromic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1643 label: clarify the policy for labels with 'inherited' in the title vs. those without - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1644 label: add new OBSOLETE term MONDO:0100136 Fanconia anemia complementation group M - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1645 label: fix typos in xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1646 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1647 label: add new term MONDO:0100137 telomere syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1648 label: add new term MONDO:0100138 X-linked recessive mitochondrial myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1649 label: exclude superclasses for MONDO:0010791 myoglobinuria, recurrent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/165 label: autoimmune retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1650 label: add superclass to 'motor neuron disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1652 label: "Missing Parent: MONDO:0010799\t mitochondrial non-syndromic sensorineural\ \ deafness with susceptibility to aminoglycoside exposure" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1653 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1654 label: Incorrect exact match for delirium - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1655 label: add new terms - children of COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1656 label: remove comment from 'hydatidiform mole' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1657 label: remove superclass from hydatidiform mole, recurrent, 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1658 label: obsolete eyebrow/eyelashes structural anomaly and children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1659 label: update def for syndromic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/166 label: Ensure OMIMs have definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1660 label: relabel MONDO:0010799 aminoglycoside-induced deafness - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1661 label: update xref for delirium - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1662 label: revise superclasses for 'dyskeratosis congenita' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1663 label: "update superclass for 'constitutional mismatch repair deficiency synd\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1664 label: revise def and syn for metabolic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1665 label: Add single-child check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1666 label: 'obsolete ''neurodegenerative disease with dementia'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1667 label: '[Obsolete] MONDO:0018040 ''immunodeficiency with severe reduction in serum IgG and IgA with normal/elevated IgM and normal number of B-cells''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1668 label: add new term MONDO:0100145 presymptomatic COVID-19 infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1669 label: fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/167 label: add KEGG disease ids - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1670 label: Update ncbitaxon_import.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1671 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1672 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1673 label: MONDO:0013710 colorectal cancer, hereditary nonpolyposis, type 5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1674 label: '[Obsolete] Orphanet-derived grouping terms - review candidates for obsoletion' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1675 label: '[Obsolete]records based on MIM numbers that OMIM has moved' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1676 label: Merge child terms with 'proteosome-associated autoinflammatory syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1677 label: obsolete Saldino-Mainzer syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1678 label: "obsolete encephalopathy, progressive, early-onset, with brain atrophy\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1679 label: obsolete angioedema, hereditary, type 1/2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/168 label: Mobius misspelled - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1680 label: add synonym to 'mitochondrial DNA depletion syndrome 9' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1681 label: Fix missing obsolete label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1682 label: update MONDO:0000447 autosomal dominant polycystic liver disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1683 label: rename 'autosomal dominant polycystic liver disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1684 label: '[Merge] MONDO:0008657 vibratory angioedema' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1685 label: '[Merge] MONDO:0009304 Gorlin-Chaudhry-Moss syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1686 label: '[Merge] MONDO:0010045 paraplegia-brachydactyly-cone-shaped epiphysis syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1687 label: '[Merge] MONDO:0010071 spondyloenchondrodysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1688 label: "[Obsolete] MONDO:0013001\tsynesthesia" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1689 label: "[Merge] MONDO:0010195\tWeissenbacher-Zweymuller syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/169 label: Create grouping classes via hallmark phenotypes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1690 label: "[Merge] MONDO:0010272\tsyndromic X-linked intellectual disability type 10" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1691 label: "[Merge] MONDO:0010357\tMRX78" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1692 label: "[Merge] MONDO:0010505\tintellectual disability-balding-patella luxation-acromicria\ \ syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1693 label: "[Merge] MONDO:0010513\tintellectual disability, X-linked, syndromic, Borck\ \ type" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1694 label: "[Merge] MONDO:0010518\tWiskott-Aldrich syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1695 label: "Obsolete MONDO:0010601\tgynecomastia, familial" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1696 label: "[Merge] MONDO:0010666\tMiles-Carpenter syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1697 label: "[Merge] MONDO:0010715\tpseudohermaphroditism, incomplete male, type 1" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1698 label: "[Merge] MONDO:0010804\tBRCATA" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1699 label: "[Merge] MONDO:0011324\thypospadias, hypertelorism, upper 51D coloboma, and\ \ mixed-type hearing loss" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/17 label: AR EDS4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/170 label: Bin all OMIM IDs under 'genetic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1700 label: "[Merge] MONDO:0011543\tBRCA3" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1701 label: "[Merge] MONDO:0012070\tautosomal dominant Charcot-Marie-Tooth disease type\ \ 2G" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1702 label: "[Merge] MONDO:0012201\ttibia, bowing of, with pseudarthrosis and pectus\ \ excavatum" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1703 label: "[Merge] MONDO:0012281\tsarcoidosis, early-onset" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1704 label: "[Merge] MONDO:0012461\tbulimia nervosa, susceptibility to, 2" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1705 label: "[Merge] MONDO:0012461\tbulimia nervosa, susceptibility to, 2" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1706 label: "[Merge] MONDO:0012616\tMRT8" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1707 label: "[Merge] MONDO:0013451\tprogressive myoclonic epilepsy type 5" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1708 label: "[Merge] MONDO:0013701\tMRT32" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1709 label: "[Merge] MONDO:0013804\tintellectual disability, autosomal dominant 12" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/171 label: Modular release OWL file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1710 label: "[Merge] MONDO:0013958\tmonocyte and dendritic cell deficiency, autosomal\ \ recessive" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1711 label: "[Merge] MONDO:0014852\tpalmoplantar carcinoma, multiple self-healing" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1712 label: MONDO:0100130 adult acute respiratory distress syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1713 label: revise OMIM xref for 'Wiskott-Aldrich syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1714 label: obsolete BRCA3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1715 label: obsolete BRCATA - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1716 label: add syn to 'adult acute respiratory distress syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1717 label: relabel obsoleted terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1718 label: SATB2 associated disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1719 label: '[NTR] cytokine release syndrome (CRS)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/172 label: Synonym request for invasive non-typhoidal salmonellosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1720 label: DKC1-related disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1721 label: '[Relabel] Neurological Conditions w/ Aminoacylase 1 Deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1722 label: 'TYPO: autosomal recessive early-onset Parksinson disease 23' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1723 label: ' MONDO:0023616 MONDO:0007888' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1724 label: '[add def] Liberfarb syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1725 label: Update 'rare' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1726 label: "[Merge] MONDO:0018238\trare bone disease related to a common gene or pathway\ \ defect" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1727 label: "[Merge] MONDO:0018719\trare capillary malformation with associated anomalies" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1728 label: 'New Term Request: Intellectual disability and spastic paraplegia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1729 label: 'New Term Request: AP-4 deficiency syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/173 label: "NCIT_C4392\tCervical Symmetrical Lipomatosis" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1730 label: 'New Term Request: X-linked Complex Neurodevelopmental Disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1731 label: '[NTR/gene]TTN-Related Myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1732 label: Update MONDO:0010916 name to include liver phenotype - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1733 label: Add LRP5 gene to MONDO:0044327 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1734 label: '[Revise subclass] [add synonym] MONDO:0020708 "Brachial Amyotrophic Diplegia"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1735 label: Mappings required for UniProtKB_Swiss-Prot Release 2020_04 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1736 label: congenital adrenal insufficiency, MONDO:0013400 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1737 label: erythropoietic protoporphyria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1738 label: '[Revise text def] classic phenylketonuria MONDO:0019259 vs phenylketonuria MONDO:0009861' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1739 label: "add superclass axiom to 'polycystic liver disease 4 with or without k\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/174 label: 'NTR: Food protein-induced enterocolitis syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1740 label: "relabel MONDO:0010916 polycystic kidney disease 3 with or without pol\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1741 label: '[definition] congenital renal artery stenosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1742 label: Rare obsolete 2020 06 30 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1743 label: relabel MONDO:0013400 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1744 label: Normalizing moved-to syn casing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1745 label: inconsistencies WRT hasRelatedSynonym and exactMatch properties - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1746 label: regenerate ncbitaxon import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1747 label: '[Merge] ''rare form of salmonellosis'' with salmonellosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1748 label: '[Merge] ''rare hematologic disease'' with ''hematologic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1749 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/175 label: 'NTR: monoclonal mast cell activation syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1750 label: revise 'rare' terms tagged for obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1751 label: 'New Term Request: ATP6AP2-related disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1752 label: add new term MONDO:0100146 ATP6AP2-related disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1753 label: '[Revise subclass] microcephaly, seizures, and developmental delay (MONDO:0013254)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1754 label: add superclass to 'microcephaly, seizures, and developmental delay' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1755 label: add synonyms to 'brachial amyotrophic diplegia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1756 label: beta thalassemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1757 label: Update uberon_import.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1758 label: '[Obsolete] Monogenic disease (super ticket)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1759 label: revise def for MONDO:0004990 'breast tumor luminal A or B' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/176 label: new synonym for MONDO:0018438 ! primary eosinophilic gastrointestinal disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1760 label: '[Obsolete] MONDO_0015881 ''gastroesophageal tumor''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1761 label: revise def for MONDO:0006060 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1762 label: add new term MONDO:0100147 SATB2 associated disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1763 label: RYR1-Related Myopathy[NTR/gene] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1764 label: '[Merge] records that seem to differ only in word order or punctuation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1765 label: '[NTR/gene] MYH7-related skeletal myopathy ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1766 label: '[Obsolete] MONDO_0015878 ''rare disease with autism''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1767 label: review 'Moyamoya syndrome' and Moyamoya disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1768 label: '[Merge] MONDO_0021281 ''cavernous hemangioma of retina'' and MONDO_0019101 ''retinal capillary malformation''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1769 label: edits to rare obsoletion candidate terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/177 label: "NCIT_C9088\tIris Melanoma" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1770 label: add new term MONDO:0100148 X-linked complex neurodevelopmental disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1771 label: add new term MONDO:0100149 MYH7-related skeletal myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1772 label: add synonym to MONDO_0002465 'bronchiolitis (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1773 label: update text def for MONDO:0002655 cutaneous Paget disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1774 label: add new term MONDO:0100150 RYR1-related myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1775 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1776 label: relabel MONDO:0012368 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1777 label: '[Obsolete] MONDO:0024583 ''hernia'' and children' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1778 label: revisions to beta thalassemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1779 label: Update f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/178 label: Is there a plan to version MONDO? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1780 label: multicore vs multiminicore - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1781 label: add content to table - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1782 label: revise xref for 'Becker muscular dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1783 label: 'revise synonym scope for multiminicore myopathy: MONDO:0018948' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1784 label: remove some axiom annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1785 label: '[Merge]MONDO_0100039 ''CDKL5 disorder'' and MONDO_0010396 ''epileptic encephalopathy, early infantile, 2''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1786 label: '[Obsolete] MONDO:0005196 teratozoospermia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1787 label: '[Revise subclass] mucolipidosis type III gamma (MONDO_0009652) be at same level as mucolipidosis type III (MONDO_0018931)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1788 label: add equiv axiom to MESH xref on 'autism (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1789 label: revisions to bone fracture - id: https://api.github.com/repos/monarch-initiative/mondo/issues/179 label: What API should people use to explore the kboom output? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1790 label: obsolete synesthesia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1791 label: obsolete monogenic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1792 label: ' obsolete Abderhalden-Kaufmann-Lignac syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1793 label: 'Ready to merge: add MONDO:0100152 DKC1-related disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1794 label: review equivalent exact and related synonyms in the same record - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1795 label: 'ready to merge: new OMIM PS' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1796 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1797 label: revise synonym scope for Marfan syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1798 label: add source to 'nephropathic cystinosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1799 label: add source to 'nephropathic cystinosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/18 label: '[WIP] Testing benign neoplasm disjoint from cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/180 label: 'Missing OMIM:261500 EOSINOPHIL PEROXIDASE DEFICIENCY; EPXD ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1800 label: 'need pattern: nuclear vs mitochondrial subtypes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1801 label: 'need pattern: pre/a/symptomaatic forms of infectious dis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1802 label: 'split term:Imerslund-Grasbeck syndrome into: generic+type1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1803 label: 'split term: permanent neonatal diabetes mellitus into: generic and type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1804 label: 'split term: vertebral, cardiac, renal, and limb defects syndrome into generic and type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1805 label: add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1806 label: Issue 1631d - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1807 label: add subclass of telomere syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1808 label: split permanent neonatal diabetes mellitus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1809 label: split vertebral, cardiac, renal, and limb defects syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/181 label: biological anomalies should not be diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1810 label: create documentation about splitting terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1811 label: Update splitting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1812 label: add synonym to 'Laing early-onset distal myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1813 label: obsolete rare hematologic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1814 label: obsolete gastroesophageal tumor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1815 label: obsolete rare disease with autism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1816 label: add children to Imerslund-Grasbeck syndrome type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1817 label: split vertebral, cardiac, renal, and limb defects syndrome 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1818 label: revise equiv axiom for 'Bardet-Biedl syndrome 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1819 label: '[Revise subclass]patterned dystrophy of the retinal pigment epithelium' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/182 label: Consider making xrefs mirror equivalence axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1820 label: '[Revise subclass]cerebral amyloid angiopathy, APP-related' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1821 label: Hypersensitivity pneumonitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1822 label: Multiple Organ Dysfunction Syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1823 label: '[NTR] Alcoholic ketoacidosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1824 label: acidosis disorder should not be a child of hematologic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1825 label: renal tubular acidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1826 label: "revise synonyms for cerebral amyloid angiopathy, APP-related and chil\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1827 label: revise label and def for multiple organ dysfunction syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1828 label: revise subclassOf for 'acidosis disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1829 label: 'add new term: alcoholic ketoacidosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/183 label: 'Bad syns from MESH: dilated cardiomyopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1830 label: New disease Term overgrowth syndrome w/or without cerebral malformations[NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1831 label: add new term MONDO:0100161 hyperkalemic renal tubular acidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1832 label: obsolete hematopoietic stem cell kinetics, control of - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1834 label: Cerebral malformation w/or without overgrowth [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1835 label: revisions to Dravet syndrome and EIEEI6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1836 label: revisions to Dravet syndrome and EEI6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1837 label: '[NTR] Kawasaki-like syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1838 label: add new term SARS-CoV-2 Kawasaki-like syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1839 label: Issue with MeSH ID as ExactMatch for MONDO:0011340 (Congenital tracheal stenosis) and MONDO:0018058 (Tracheal agenesis) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/184 label: Consolidating documentation of MONDO-Orphanet classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1840 label: '[Merge]MONDO:0019847 congenital adrenal hypoplasia of maternal cause with MONDO_0010264 X-linked adrenal hypoplasia congenita' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1841 label: OMIM sync - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1842 label: 'split term: Silver-Russell syndrome into generic and type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1843 label: new PSs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1844 label: Add 3 new PSs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1845 label: add OMIMPS to 'congenital vertebral-cardiac-renal anomalies syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1846 label: split 'permanent neonatal diabetes mellitus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1847 label: split oculopharyngodistal myopathy and Silver-Russell syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1848 label: create a sequence ontology (SO) import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1849 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/185 label: new export format - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1850 label: split intellectual disability-developmental delay-contractures syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1851 label: making the Mondo pipline executable with ODK - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1852 label: addig SO import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1853 label: fixed HGNC and ncbitaxon import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1854 label: new omims, children of PSs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1855 label: check HGNC identifiers - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1856 label: add imports to new release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1857 label: C0009405 is not correct for MONDO:0018618 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1858 label: release imports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1859 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/186 label: Hemihypertrophy subClassOf Macroglossia? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1860 label: weird annotation - BROAAD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1861 label: '[Obsolete] CFM1 ?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1862 label: '[Revise logical def] ''Townes-Brocks syndrome 2''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1863 label: split intellectual disability, autosomal dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1864 label: revise logical def for 'Townes-Brocks syndrome 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1865 label: obsolete CFM1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1866 label: "fix broad synonym annotation for 'intellectual disability-development\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1867 label: "remove incorrect xref from '46,XY disorder of sexual development due \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1868 label: rename MONDO:0014663 Silver-Russell syndrome 3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1869 label: revise xref for 'congenital tracheal stenosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/187 label: missing and incorrect genes associated in fanconi disease group - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1870 label: reclassify orphanet terms that were children of 'disease or disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1871 label: add logical def to acute liver failure - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1872 label: fix capitalization for liberfarb syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1873 label: "add new term MONDO:0100173 cerebral malformation with or without over\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1874 label: fix synonym for 'patterned macular dystrophy 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1875 label: revise synonyms for isolated sulfite oxidase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1876 label: 'Ready to merge: add new term MONDO:0100175 TTN-related myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1877 label: add new term MONDO:0100176 AP-4 deficiency syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1878 label: Merge MONDO_0019510 'autosomal dominant medullary cystic kidney disease without hyperuricemia' is equivalent to MONDO_0020726 'medullary cystic kidney disease 1'. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1879 label: Relabel MONDO:0013128 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/188 label: Add DADA2 disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1880 label: Merge or redefine UMOD-related entities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1881 label: udpate def and classification for 'erythropoietic protoporphyria' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1882 label: Rename isolated polycystic liver disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1883 label: merge familial leiomyomatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1884 label: Update mitochondrial_subtype.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1885 label: Update nuclear_subtype.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1886 label: rename MONDO:0017938 X-linked cleft palate and ankyloglossia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1887 label: merge periodic fever, menstrual cycle-dependent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1888 label: Dias-Logan Syndrome - New Synonym request - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1889 label: add synonym to Dias-Logan syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/189 label: Charcot Marie Tooth dual parentage - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1890 label: fix typo in def for MONDO:0009136 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1891 label: reclassify 'Muir-Torre syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1892 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1893 label: Dravet syndrome blank? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1894 label: obsolete teratozoospermia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1895 label: obsolete rare form of salmonellosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1896 label: obsolete hernia and children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1897 label: obsolete Epstein-Barr virus insertion site 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1898 label: "obsolete immunodeficiency with severe reduction in serum IgG and IgA \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1899 label: obsolete congenital renal artery stenosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/19 label: split Ohtahara syndrome from early infantile epileptic encephalopathy? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/190 label: append taxon to animal diseases in OMIA - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1900 label: obsolete dilated cardiomyopathy 1T - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1901 label: OMIM source of truth - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1902 label: '[merge]MONDO:0017161/frontotemporal dementia with motor neuron disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1903 label: working on omim slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1904 label: nuclear vs mitochondrial subtypes patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1905 label: clean up obsolete classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1906 label: revise duplicate defs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1907 label: "merge palmoplantar keratoderma, mutilating, with periorificial ker\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1908 label: "rename MONDO:0100031 adolescent/adult onset autosomal dominant epilep\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1909 label: obsolete chondrodysplasia lethal recessive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/191 label: mutation-specific melanoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1910 label: merge spinal muscular atrophy, type I, with congenital bone fractures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1911 label: 'Merge: attention deficit-hyperactivity disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1912 label: reclassify scapuloperoneal spinal muscular atrophy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1913 label: merge atrial septal defect coronary sinus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1914 label: "obsolete MONDO:0010582 diabetes insipidus, neurohypophyseal type, X-lin\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1915 label: "rename MONDO:0011261 spondyloepiphyseal dysplasia with coronal cranio\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1916 label: obsolete 3-methylglutaconic aciduria, type VIII - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1917 label: obsolete encephalopathy recurrent of childhood - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1918 label: rename MONDO:0016002 Ehlers-Danlos syndrome, kyphoscoliotic type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1919 label: obsolete alpha-2 deficient collagen disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/192 label: Create mechanism to push to Wikidata - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1920 label: rename MONDO:0010682 myoclonic epilepsy, progressive, X-linked - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1921 label: confusing axiom in `mondo.owl` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1922 label: '[NTR/gene] TPM2-Related Myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1923 label: various admin - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1924 label: Add PRKCSH gene symbol to MONDO:0008265 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1925 label: Add SEC63 to MONDO:0014860 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1926 label: Add ALG8 to MONDO:0054743 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1927 label: Add PRKCSH to MONDO:0008265 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1928 label: Review MONDO:0010682 myoclonic epilepsy, progressive, X-linked - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1929 label: rename MONDO_0005302 'attention deficit disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/193 label: missing tendinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1930 label: review 'attention deficit-hyperactivity disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1931 label: Automation - take OMIMs with last major update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1932 label: review 'spondyloepimetaphyseal dysplasia' classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1933 label: '[NTR/gene] MSX2-related craniosynostosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1934 label: Add ADTKD-SEC61A1 to MONDO:0014891 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1935 label: Merge MONDO:0033004 and MONDO:0033004 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1936 label: '[Revise subclass] MONDO:0005711 congenital diaphragmatic hernia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1937 label: MONDO:0018661 Zika virus infectious disease - synonyms and typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1938 label: wrong version IRI in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1939 label: add proper mondo-base - id: https://api.github.com/repos/monarch-initiative/mondo/issues/194 label: Place OMIM traits into distinct file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1941 label: Pattern redesign - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1942 label: check 'disease' class from OGMS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1943 label: ANON1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1944 label: edit inherited_susceptibility.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1945 label: QC checks and tagging system for Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1946 label: reinstate limbal stem cell deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1947 label: rename MONDO:0011727 anorexia nervosa, susceptibility to, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1948 label: revise classifications for spondyloepimetaphyseal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1949 label: Add ecto to list of imports, but skip - id: https://api.github.com/repos/monarch-initiative/mondo/issues/195 label: Issue 175 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1950 label: add synonyms to MONDO:0018661 Zika virus infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1951 label: add new term MONDO:0100178 MSX2-related craniosynostosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1952 label: "add synonyms to MONDO:0014891 hyperuricemic nephropathy, familial juv\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1953 label: 'imports mechanism: remove-seed and cosmetics' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1954 label: '[Obsolete] MONDO:0020141 infectious disease with dementia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1955 label: 'Cystinuria type A (MONDO:0019745) incorrect exactmatch MeSH ID ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1956 label: Syndactyly, Type I (MONDO:0008512) incorrect exactmatch OMIM ID and ORPHA ID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1957 label: apolipoprotein A-I , OMIM, and possible children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1958 label: MONDO:0008171 nephrolithiasis xrefs to (now) obsolete EFO term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1959 label: rename Mondo localized - id: https://api.github.com/repos/monarch-initiative/mondo/issues/196 label: 'relabled term, per Peter''s suggestion. Addresses #176' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1960 label: relabel cervical rib? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1961 label: '''Meckel''s diverticulum''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1962 label: '[Revise subclass] ''Werdnig-Hoffmann disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1963 label: relabel 'spinal muscular atrophy, type 1' and children to match OMIM labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1964 label: relabel MONDO:0045042 restricted to specific location - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1965 label: revise xrefs for nephrolithiasis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1966 label: add superclass to 'hypoalphalipoproteinemia, primary, 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1967 label: rename MONDO:0007303 cervical rib syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1968 label: rename MONDO:0007955 Meckel diverticulum - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1969 label: revise xref for cystinuria type A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/197 label: "removed xref to OMIM:182900 on MONDO_0019350 hereditary spherocytosis\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1970 label: exclude superclss for 'skeletal muscle disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1972 label: Ensure no Mondo terms use labels from other ontologies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1973 label: '[NTR]Multiple' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1974 label: Issue 1825 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1975 label: Revise diseases with non-unique textual definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1976 label: remove equiv axiom from 'hereditary leiomyomatosis and renal cell cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1977 label: '[Revise text def] remove see this term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1978 label: Make some definitions lower case that are not - id: https://api.github.com/repos/monarch-initiative/mondo/issues/198 label: "added new term Food protein-induced enterocolitis syndrome. Addresses\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1980 label: Some lowercase - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1981 label: remove 'see this term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1982 label: References of deprecated entities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1983 label: fix references of deprecated entities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1984 label: Revise definitions for diseases with non-unique textual definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1985 label: remove 'see this term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1986 label: Reactivate ECTO import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1987 label: System for tagging Mondo classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1988 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1989 label: Update HGNC goal which was broken - id: https://api.github.com/repos/monarch-initiative/mondo/issues/199 label: fixed typo in synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1990 label: Incomplete refrences between MONDO and HPO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1991 label: MONDO:0018087 'viral hemorrhagic fever' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1992 label: '[Revise subclass] MONDO:0005358 Dengue hemorrhagic fever' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1993 label: MONDO:0004651 smallpox - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1994 label: Ontology release notes - show revisions to definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1995 label: reclassify MONDO:0000890 Zika virus congenital syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1996 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1997 label: Mondo term for ID:0020074 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1998 label: update def for canker sore - id: https://api.github.com/repos/monarch-initiative/mondo/issues/1999 label: rename MONDO_0020074 'progressive myoclonus epilepsy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2 label: Rename - id: https://api.github.com/repos/monarch-initiative/mondo/issues/20 label: Ensure every axiom has provenance - id: https://api.github.com/repos/monarch-initiative/mondo/issues/200 label: 'added tendinopathy terms. Addresses #193 - Delete this PR' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2000 label: add synonyms to MONDO:0004651 smallpox - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2001 label: add superclass to 'Dengue hemorrhagic fever' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2002 label: 'Revise: Add parent term of MONDO:0010252' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2003 label: "add superclass too 'intellectual disability, X-linked, with panhypopi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2004 label: add synonyms to 'viral hemorrhagic fever' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2005 label: add new term GTP cyclohydrolase I deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2006 label: add new term immune reconstitution inflammatory syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2007 label: add synonyms to SARS-CoV-2 Kawasaki-like syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2008 label: update axioms on MONDO:0000275 obsolete monogenic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2009 label: 'QC: fixing all deprecated class references' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/201 label: 'Creation of Disease Entity for FOXG1 Disorder ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2010 label: fix def and syns for MONDO:0001868 primary angle-closure glaucoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2011 label: '[NTR] bacterial hemorrhagic fever' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2012 label: MONDO:0005072 neuroblastoma update def and comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2013 label: revise logical def for 'polycystic kidney disease 5' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2014 label: add new classes MONDO:0100188 combined ApoA-I and ApoC-III deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2015 label: '[Merge] MONDO_0017938 ''X-linked cleft palate and ankyloglossia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2016 label: add Amniotic infection syndrome as a synonym for Amnionitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2017 label: obsolete Moyamoya syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2018 label: obsolete vibratory angioedema - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2019 label: remove comment to consider merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/202 label: Creation of Disease Entity for CDKL5 Disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2020 label: obsolete congenital adrenal hypoplasia of maternal cause - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2021 label: add synonyms to MONDO_0008264 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2022 label: add 'fever' phenotype to fever terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2023 label: revise equiv axioms on obsolete classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2024 label: "obsolete infectious disease with dementia and genetic neurodegenerat\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2025 label: add superclass axiom to MONDO:0008265 polycystic liver disease 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2026 label: policy question using MONDO:0011430 as an example - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2027 label: '[Merge] MONDO_0016021 ''early infantile epileptic encephalopathy'' and MONDO_0100062 ''developmental and epileptic encephalopathy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2028 label: add equiv axiom to MONDO:0008265 polycystic liver disease 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2029 label: Added medullary carcinoma terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/203 label: Axenfeld-Reiger 3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2030 label: update purl for description - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2031 label: '[logical def] need maxo axiomatization' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2032 label: 'review term: MONDO:0005179 ovarian adenoma benign' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2033 label: 'MAJOR: Changing mondo.owl' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2034 label: Some non-intended missing terms from imports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2035 label: Add cleanup command to bring some order to src/ontology - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2036 label: Added ECTO import back - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2037 label: Phelan McDermid syndrome Fix Typo MONDO_0011652 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2038 label: update label for Phelan-McDermid syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2039 label: OMIM ingest to map UniProtKB 2020_06 release to MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/204 label: Disambiguate neurodegeneration with brain iron accumulation prototype from 2A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2040 label: 'NTR: pregnancy associated osteoporosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2041 label: 'Part 1: rename developmental epileptic encephalopathy classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2042 label: '[NTR] Rare genetic intellectual disability or genetic intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2043 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2044 label: 'add new terms: MONDO:0100192 liver failure' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2045 label: 'New term: X-linked intellectual disability with hypopituitarism' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2046 label: '[Merge] MONDO_0016021 ''early infantile epileptic encephalopathy'' and rename children' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2047 label: add term MONDO:0100194 pregnancy associated osteoporosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2048 label: 'Add Synonym: Vaginismus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2049 label: add synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/205 label: cat scratch fever - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2050 label: add superclass to 'dyskeratosis congenita, autosomal dominant 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2051 label: "add new term MONDO:0100195 X-linked intellectual disability with hypo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2052 label: need pattern for pregnancy-associated X - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2053 label: add term MONDO:0100196 TPM2-related myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2054 label: add def and superclass axiom to MONDO:0054743 polycystic liver disease 3 with or without kidney cysts - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2055 label: update def and add syn to multiple acyl-CoA dehydrogenase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2056 label: add def and syn to maternally-inherited spastic paraplegia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2057 label: add xref to MONDO_0011190 'nephronophthisis 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2058 label: 'Add Synonym: Congenital fiber-type disproportion myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2059 label: 'Add Synonym: Drug-induced liver injury' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/206 label: sarcoidosis hypersensitivity type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2060 label: 'Add Synonym: Salpingo-oophoritis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2061 label: 'Add Synonym: Suppurative thyroiditis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2062 label: 'Add Synonym: Epidural abscess ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2063 label: 'NTR: Parainfluenza Infectious Disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2064 label: 'Add Synonym: Gout' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2065 label: add synonyms to 'congenital fiber-type disproportion myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2066 label: addd synonym to 'craniosynostosis, Boston type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2067 label: add synonyms to gout - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2068 label: MeSH:C538339 is not a recognised xref for Nasopharyngeal Carcinoma (MONDO:0015459) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2069 label: add seeAlso to 'CDKL5 disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/207 label: hypertrophic cardiomyopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2070 label: 'Progressive Myoclonic Epilepsy typo ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2071 label: rename MONDO:0011481 craniosynostosis 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2072 label: revise xref for 'nasopharyngeal carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2073 label: Check for deprecated classes in xrefs? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2074 label: add synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2075 label: add new term MONDO:0100197 parainfluenza infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2076 label: revise xref for MONDO_0015194 'sideroblastic anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2077 label: obsolete OMIM gene/protein records - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2078 label: fix typo in Zellweger syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2079 label: add synonym to 'familial juvenile hyperuricemic nephropathy type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/208 label: The genetic nomenclature of recessive cerebellar ataxias - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2080 label: 'Add Synonym: Contracture' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2081 label: 'Add Synonym: Ichthyosis (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2082 label: 'Add Synonym: Monofixation syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2083 label: 'Add Synonym: PSMNSW' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2084 label: "add new term MONDO:0100201 growth hormone insensitivity syndrome wit\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2085 label: fail - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2086 label: adding equivalents to release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2087 label: Update to mondo.owl file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2088 label: Update Changes.md - added last releases changeset and mondo.owl warning - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2089 label: 'OLD: adding labels to reports' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/209 label: Kartagener syndrome / primary ciliary dyskinesia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2090 label: 'OLD: added new synonyms from dosdp pipeline' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2091 label: 'OLD: Omim makefile 1339' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2092 label: 'OLD: Issue 1339 ps old' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2093 label: 'OLD: Docs update' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2094 label: 'QC: add check for underscores in definitions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2095 label: Invalid definitions? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2096 label: '[Revise text def] Get rid of _ in definitions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2097 label: Remove all underscores from definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2098 label: revise defs for NCIT terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2099 label: '[Obsolete] MONDO:0006315 neoplastic medium-sized B-lymphocyte with basophilic cytoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/21 label: familial adenomatous polyposis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/210 label: 'Review: ALS' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2100 label: 'New term: cerebellar ataxia, intellectual disability, and dysequilibrium syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2101 label: Clarify diseases vs phenotypes, add to Mondo FAQ - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2102 label: Change a handful more NCIT definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2103 label: Adding QC to avoid definitions containing underscore - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2104 label: '[Obsolete] ''common hematopoietic neoplasm''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2105 label: '[Revise subclass] top level classes in Mondo' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2106 label: fix the version iri on mondo.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2107 label: '[Merge] merge ''X-linked sideroblastic anemia 1'' with ''X-linked sideroblastic anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2108 label: obsolete X-linked sideroblastic anemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2109 label: 'create new classes: parainfluenza virus type 1, 2, 4 infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/211 label: question about Amyotrophic lateral sclerosis type 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2110 label: add synonym to MONDO:0004719 'ichthyosis (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2111 label: add synonyms to monofixation syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2112 label: reclassify attention deficit disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2113 label: revise def for MONDO:0019269 ichthyosis (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2114 label: '[Revise hierarchy] ''ichthyosis (disease)''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2115 label: "move GARD equiv axiom to MONDO_0018973 'patterned dystrophy of the re\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2116 label: '[Revise subclass] MONDO:0016587, arrhythmogenic right ventricular cardiomyopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2117 label: reclassify 'arrhythmogenic right ventricular dysplasia, familial, 14' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2118 label: '[Revise subclass] Diamond-Blackfan anemia (MONDO:0015253)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2119 label: "merge 'autosomal dominant medullary cystic kidney disease without hy\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/212 label: classification of neonatal epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2120 label: Map to Animal Health Ontology for Livestock - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2121 label: Add a tag `latest` with the version of the last built - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2122 label: Unspecific "intrinsic" synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2123 label: remove syn from urethral intrinsic sphincter deficiency (typo) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2124 label: 'MONDO:0032908: add synonyms to CEBALID syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2125 label: "rename MONDO:0009133 cerebellar ataxia, intellectual disability, and \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2126 label: Relabel terms to 'intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2128 label: '[Revise subclass] glycogen storage diseases' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2129 label: Reflexive annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/213 label: added logical def to MONDO_0020070 'neonatal epilepsy syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2130 label: Revise defs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2131 label: '[Obsolete] X-linked recessive intellectual disability-macrocephaly-ciliary dysfunction syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2132 label: Branch capital - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2133 label: Add a design pattern template for phenotypic-series level terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2134 label: Remove related synonym where there is already an exact - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2135 label: Adding new annotation property "excluded from QC check" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2136 label: remove excluded subclassOf relationships - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2137 label: '[Obsolete] MONDO_0015560 ''classic mast cell leukemia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2138 label: Pattern documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2139 label: "add equivObsolete to 'familial juvenile hyperuricemic nephropathy typ\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/214 label: classification of Adolescent/Adult epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2140 label: 'Review hierarchy: Autosomal dominant tubulointerstitial kidney disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2141 label: need a pattern for polygenic disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2142 label: NANDO matches - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2143 label: fix label and add def to MONDO:0033135 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2144 label: revise superclasses for MONDO:0015253 Diamond-Blackfan anemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2145 label: '[Obsolete] ''polymalformative genetic syndrome with increased risk of developing cancer''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2146 label: revise defs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2147 label: Something is badly wrong with the OLS version of MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2148 label: '[Obsolete] Futcher line' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2149 label: obsolete Futcher line - id: https://api.github.com/repos/monarch-initiative/mondo/issues/215 label: classification of variable age epilepsy classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2150 label: 'Create pattern: OMIM_phenotypic_series' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2151 label: relabel 3M syndrom children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2152 label: Update lymphoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2153 label: Update lipoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2154 label: Update lipoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2155 label: Update location.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2156 label: 'question about pattern: location_top' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2157 label: Update leiomyosarcoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2158 label: Update leiomyoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2159 label: Update leiomyoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/216 label: epilepsy classifications by genetic/chromosomal abnormalities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2160 label: Update inherited_susceptibility.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2161 label: Update juvenile.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2162 label: Update isolated.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2163 label: Update inflammatory_disease_by_site.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2164 label: Update juvenile.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2165 label: Update infectious_inflammation.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2166 label: Update infantile.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2167 label: Update inborn_metabolic_disrupts.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2168 label: Update inborn_metabolic_disrupts.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2169 label: Update inborn_metabolic.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/217 label: classification of structure epilepsies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2170 label: Update hemangioma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2171 label: Update environmental_stimulus.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2172 label: Update environmental_stimulus.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2173 label: Update location.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2174 label: Update disrupts_process.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2175 label: Update disease_series_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2176 label: Update infantile.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2177 label: Tpm3 related myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2178 label: Create OMIM_disease_series_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2179 label: Update syndromic.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/218 label: classification of metabolic epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2180 label: Align mediastinitis with inflammation pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2181 label: Unsatisfiable 'gastric neuroendocrine tumor, well differentiated, low or intermediate grade' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2182 label: Unsatisfiable 'infective arthritis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2183 label: Unsatisfiable 'maple bark strippers' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2184 label: Update README.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2185 label: Update location.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2186 label: update logical def for 'maple bark strippers' lung' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2187 label: revise logical def for 'bacterial arthritis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2188 label: Make travis fail if Jenkins could not be triggered - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2189 label: Update neuroendocrine_neoplasm.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/219 label: classification of immune epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2190 label: Testing to run Monarch QC on travis again - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2191 label: "revise logical def for 'gastric neuroendocrine tumor, well differenti\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2192 label: revise logical def for infective arthritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2193 label: Update allergic_form_of_disease.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2194 label: Update allergy.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2195 label: inaccurate synonyms for term "COVID-19"? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2196 label: Create Mondo Preferred Root annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2197 label: Fix unsatisfiable classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2198 label: 'pattern: inflammatory disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2199 label: '[Merge] ''catecholamine-producing tumor''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/22 label: medgen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/220 label: added subset tag to Camurati-Engelmann type 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2200 label: add MONDO:equivalentObsolete to 'catecholamine-producing tumor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2201 label: Oct2020 OMIM 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2202 label: Weave in new OMIMPS terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2203 label: question - relationship b/w phaeochromocytoma + Adrenal/paraganglial tumor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2204 label: Faq update 2020 10 22 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2205 label: Faq update 2020 10 22 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2206 label: Harmonise representation of gene (products) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2207 label: Replace missing ecto terms with replacements - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2208 label: Distal vs. proximal myopathy with early respiratory failure - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2209 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/221 label: Issue 165 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2210 label: Suggested terms with missing xref where MeSH ID could be added as equivalent axiom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2211 label: MeSH:C537772 is not a recognised xref for microtia (MONDO:0010920) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2212 label: Suggested updates to current exactMatch xref MeSH ID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2213 label: 'Suggested updates to someMONDO terms where xref MeSH IDs from closeMatch to exactMatch ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2214 label: '[NTR] Collagen VI-Related Myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2215 label: add equiv axioms to MESH xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2216 label: Update build-release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2217 label: Delete moss-cide.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2218 label: pleural mesothelioma (MONDO:0003308) incorrect exactMatch DOID:5157 benign pleural mesothelioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2219 label: improve Mondo documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/222 label: Issue 135 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2220 label: Update index.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2221 label: combine Build pipeline and Releases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2222 label: combine docs on imports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2223 label: should 'holoprosencephaly 13, x-linked' be a child of holoprosencephaly? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2224 label: OMIM ingest to do's - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2225 label: capitalize DNA in these labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2226 label: should terms and XRefs for MIM numbers or phenotypic series be limited to genetic disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2227 label: Weave in new OMIMPS terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2228 label: '[NTR] Long COVID' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2229 label: '[NTR] Rapidly progressive primary central nervous system vasculitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/223 label: 'Ready to merge: Issue 50 dystonia classification' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2230 label: '[NTR/gene] A20 Haploinsufficiency/TNFAIP3' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2231 label: HGNC genes should be classes, not punned to individuals - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2232 label: Create disease_series_by_gene_and_inheritance - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2233 label: HGNC import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2234 label: unsatisfiable classes due to 'realized in response to stimulus' to water exposure - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2235 label: change range to water - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2236 label: change variable in environmental_stimulus pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2237 label: Update environmental_stimulus.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2238 label: "add new term MONDO:0100195 X-linked intellectual disability with hypo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2239 label: "Update and rename realized_in_response_to.yaml to realized_in_respons\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/224 label: Need help with GARD definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2240 label: revisions to 'familial isolated arrhythmogenic right ventricular dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2242 label: Update susceptibility_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2243 label: Update OMIM_disease_series_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2244 label: capitalize DNA in labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2245 label: '[Obsolete] MONDO_0007678' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2246 label: Change stimuli of "occupational diseases" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2247 label: Consider synonyms "ATTR-CM" "hereditary transthyretin-mediated amyloidosis" for MONDO:0019441 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2248 label: OMIM Phenotypic Series for CDG type I on two MONDO terms? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2249 label: OMIM slurp 4. November 2020 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/225 label: Issue 79.9 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2250 label: Added xref sources to OMIMPS xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2251 label: Additional xrefs for MONDO:0100096, COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2252 label: fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2253 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2254 label: obsolete glycoprotein, renal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2255 label: Synonyms from NCIT/OMIM/GARD/Orphanet, should be exact - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2256 label: rename epilepsy terms to match OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2257 label: OMIM ingest - need OMIM:301044 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2258 label: obsolete Brooks-Wisniewski-brown syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/226 label: obsoleted class MONDO_0022482 'Apolipoprotein C 2i deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2260 label: '[Obsolete] MONDO_0033571 ''skeletal muscle glycogen content and metabolism quantitative trait locus''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2261 label: Update omim-exclusion-set.obo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2262 label: nonpapillary Renal cell carcinoma & clear cell renal carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2263 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2264 label: "obsolete skeletal muscle glycogen content and metabolism quantitative\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2265 label: Add xrefs for MONDO:0100096 COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2266 label: 'New OMIMPS: mitochondrial complex iv deficiency, nuclear-type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2267 label: New OMIM terms 2020.11.07 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2268 label: Mondo - add tags in - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2269 label: capitalize roman numerals - id: https://api.github.com/repos/monarch-initiative/mondo/issues/227 label: review classification of MONDO_0004960 monoclonal gammopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2270 label: Update Changes.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2271 label: fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2272 label: fix capitalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2273 label: Investigate why some diseases match to multiple patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2274 label: add term MONDO:0033885 mitochondrial complex IV deficiency, nuclear-type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2275 label: 'add term: MONDO:0100222 A20 haploinsufficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2276 label: remove comment from MONDO:0007763 nonpapillary renal cell carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2277 label: Mitochondrial complex I deficiency, nuclear type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2278 label: split mitochondrial complex I deficiency, nuclear type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2279 label: Orphanet slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/228 label: various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2280 label: Updated slurp code, rename OMIMPS pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2281 label: No class should be equivalent to an OMIM and OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2282 label: Orphanet slurp - add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2283 label: Add term for the OMIM PS191830, renal hypoplasia/aplasia[NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2284 label: 'Merge Status: MONDO:0013517 (beta thalassemia)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2285 label: remove comment from 'beta-thalassemia HBB/LCRB' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2286 label: '[Revise logical def] MONDO_0005120' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2287 label: '[Obsolete] alpha satellite DNA' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2288 label: obsolete DNA, satellite, alpha type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2289 label: add superclass to 'Drosophila C virus infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/229 label: Suggest revising def for MONDO_0015990 'focal, segmental or multifocal dystonia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2290 label: add syns and xrefs to renal agenesis (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2291 label: merge X-linked cleft palate and ankyloglossia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2292 label: update def of variant ABeta2M amyloidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2293 label: remove syn from phenylketonuria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2294 label: Updated tagging, pattern matches and source generation code. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2295 label: Delete two irrelevant files - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2296 label: change synonym scope for syns of COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2297 label: exclude superclass for Cornelia de Lange syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2298 label: add syn and update xref for microtia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2299 label: ' obsolete common hematopoietic neoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/23 label: Add RGD disease xrefs/equivalencies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/230 label: familial thrombocytosis and essential thrombocythemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2300 label: obsolete neoplastic medium-sized B-lymphocyte with basophilic cytoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2301 label: obsolete Silver-Russell syndrome due to a point mutation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2302 label: obsolete classic mast cell leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2303 label: "obsolete X-linked recessive intellectual disability-macrocephaly-cili\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2304 label: 'need an iatrogenic DP ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2305 label: ' add term MONDO:0100225 collagen 6-related myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2306 label: add equiv axiom to MESH xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2307 label: change syn scope and xref axiom for pleural mesothelioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2308 label: add MESH xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2309 label: Is ulna(r) hypoplasia the same as upper limb mesomelic dysplasia? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/231 label: Is bilirubin induced brain injury in the newborn the same as BIND? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2310 label: update MR to intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2311 label: obsolete degenerative disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2312 label: '[Obsolete] atrophy terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2313 label: remove comment from MONDO:0001046 imperforate anus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2314 label: add definition to congenital renal artery stenosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2315 label: obsolete PSMNSW and create 'parasomnia, sleepwalking type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2316 label: add superclasses to cystic fibrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2317 label: "obsolete disease with punctate palmoplantar keratoderma as a major fe\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2318 label: obsolete disease with Cushing syndrome as a major feature - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2319 label: obsolete alpha-2-deficient collagen disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/232 label: added defs for Gard rare subset - WIP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2320 label: Create omim-subsumption-warning.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2321 label: reclassify OMIM classes that were subclasses of OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2322 label: merge terms into GM3 synthase deficiency, MONDO_0018274 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2323 label: Kilquist Syndrome [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2324 label: Adding basic pattern checking to CI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2325 label: Heritable pulmonary arterial hypertension - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2326 label: Merge status? MONDO:0024462 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2327 label: telangiectasia, hereditary hemorrhagic, of Rendu, Osler, and Weber; HTT1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2328 label: MONDO:0007269 and MONDO:0022651 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2329 label: MRX52 and ARX-related MR [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/233 label: Typo - Sprengel anomaly (HP:0000912) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2330 label: Long QT syndromes [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2331 label: OMIM update 18. Nov. 2020 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2332 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2333 label: merge distal myopathy with early respiratory muscle involvement - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2334 label: disease susceptibility should not be a subclass of the disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2335 label: excluded superclasses for OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2336 label: Adding abbreviation annotations to all synonyms which are abbreviations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2337 label: autosomal recessive cutis laxa type 2, classic type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2338 label: Need to see what has been obsoleted in Orphanet and sync - id: https://api.github.com/repos/monarch-initiative/mondo/issues/234 label: various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2340 label: various susceptibility fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2341 label: Adding abbreviation synonym types everywhere - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2342 label: 'NTR: VEXAS syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2343 label: Bring in corresponding genes for OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2344 label: Add more abbreviation annotations. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2345 label: Crisponi syndrome a synonym or distinct disorder? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2346 label: obsolete spondyloenchondrodysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2347 label: obsolete Gorlin-Chaudhry-Moss syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2348 label: obsolete syndromic X-linked intellectual disability type 10 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2349 label: obsolete MRX78 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/235 label: Top level Disease cross-references - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2350 label: "update xref on 'intellectual disability-balding-patella luxation-acro\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2351 label: merge Miles-Carpenter syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2352 label: merge pseudohermaphroditism, incomplete male, type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2353 label: "obsolete hypospadias, hypertelorism, upper 51D coloboma, and mixed-ty\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2354 label: Distal hereditary motor neuropathy type 5/ 5A[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2355 label: obsolete obsoleted classes from Orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2356 label: obsolete Weissenbacher-Zweymuller syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2357 label: obsolete nodulosis-arthropathy-osteolysis syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2358 label: '[Merge] ''Goldenhar syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2359 label: "obsolete rare genetic palpebral, lacrimal system and conjunctival dis\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/236 label: HP:0009071 and HP:0100614 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2360 label: '[NTR] Subtypes in MONDO' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2361 label: is myosclerosis a myopathy? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2362 label: '[NTR/gene] map UniProtKB 2021_01 release to MONDO' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2363 label: Lesch-Nyhan syndrome and hypoxanthine-guanine phosphoribosyltransferase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2364 label: merge MRT32 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2365 label: obsolete Goldenhar syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2366 label: obsolete Weissenbacher-Zweymuller syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2367 label: revise synonyms for arthrogryposis, distal, type 1A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2368 label: '[NTR/gene] LAMA2-Related Muscular Dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2369 label: MONDO:0022652 cardiomyopathy dilated with conduction defect type 2 [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/237 label: Mondo has xrefs to deprecated DO classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2370 label: Change label for MONDO:0014567 (GPT2) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2371 label: relabel MONDO:0014567 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2372 label: obsolete FTDALS and merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2373 label: Review susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2374 label: relabel MONDO:0008535 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2375 label: exclude synonyms from 'Lesch-Nyhan syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2376 label: obsolete invasive pneumococcal disease, recurrent isolated - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2377 label: Diabetes mellitus, noninsulin-dependent [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2378 label: 'Spastic paraplegia 35/FAHN ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2379 label: OMIM PS105400 for ALS on multiple entries? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/238 label: retinopathy vs retinal disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2380 label: Update inherited_susceptibility.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2381 label: Update susceptibility_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2382 label: obsolete paraplegia-brachydactyly-cone-shaped epiphysis syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2383 label: remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2384 label: update logical defs for food allergy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2387 label: fix typo in MONDO:0008265 polycystic liver disease 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2388 label: obsolete pseudopapilledema (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2389 label: obsolete gynecomastia, familial - id: https://api.github.com/repos/monarch-initiative/mondo/issues/239 label: A proposed nosology of inborn errors of metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2390 label: obsolete rare bone disease related to a common gene or pathway defect - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2391 label: update pattern for infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2392 label: robot repair - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2393 label: obsolete autosomal dominant Charcot-Marie-Tooth disease type 2G - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2394 label: obsolete tibia, bowing of, with pseudarthrosis and pectus excavatum - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2395 label: obsolete sarcoidosis, early-onset - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2396 label: obsolete extraskeletal mesenchymal chondrosarcoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2397 label: obsolete MRT8 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2398 label: obsolete acute myeloid leukemia with mutated CEBPA - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2399 label: obsolete palmoplantar carcinoma, multiple self-healing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/24 label: issue with MONDO_0010850 Tessier number 4 facial cleft classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/240 label: "change label of hereditary fructose intolerance to Fructosemia \u2013 HFI" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2400 label: ' obsolete adenosarcoma of the corpus uteri' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2401 label: obsolete inflammatory skin disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2402 label: obsolete pigeon-breeder lung disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2403 label: obsolete ocular coloboma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2404 label: obsolete acro-renal-ocular syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2405 label: obsolete lung oat cell carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2406 label: obsolete progressive myoclonic epilepsy type 5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2407 label: obsolete intellectual disability, autosomal dominant 12 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2408 label: '[Obsolete] sex dev terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2409 label: 'reclassify chromosomal disorders ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/241 label: added new term food protein-induced enterocolitis syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2410 label: obsolete monocyte and dendritic cell deficiency, autosomal recessive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2411 label: obsolete catecholamine-producing tumor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2412 label: obsolete lambda 5 deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2413 label: obsolete deafness hyperuricemia neurologic ataxia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2414 label: '[Merge] ''phosphoribosylpyrophosphate synthetase deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2415 label: obsolete rare capillary malformation with associated anomalies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2416 label: Missing MONDO -> EFO xref for Bronchitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2417 label: obsolete Walker-Warburg syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2418 label: add dbxref to bronchitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2419 label: Clarification request- Sudden cardiac arrest/death - id: https://api.github.com/repos/monarch-initiative/mondo/issues/242 label: Epilepsy.2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2420 label: MONDO:0014206 Cross ref to UMLS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2421 label: envo imports has too many terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2422 label: ' tidy up of the axiom annotations on xrefs' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2423 label: Psychiatric and mental disorders - align with wikipedia/DSM5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2424 label: revise synonym for Alsing syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2425 label: '"Spondyloepiphyseal dysplasia" and "brachyolima" Maroteaux type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2426 label: obsolete cytokine deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2427 label: Sugarman "syndrome" vs. "brachydactyly" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2428 label: obsolete hypertelorism (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2429 label: Obsolete sex dev terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/243 label: Epilepsy 212 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2430 label: ' obsolete cardiomyopathy dilated with conduction defect type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2431 label: add new term LAMA2-related muscular dystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2432 label: reclassify pulmonary arterial hypertension terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2433 label: Long QT syndromes [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2434 label: add subclassOf axiom to 'hyperprolactinemia (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2435 label: rename MONDO:0014890 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2436 label: check that OMIMPS are xref'd on heritable forms of disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2437 label: add abbreviation tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2438 label: MONDO:0016424 into MONDO:0011660[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2439 label: update MR to intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/244 label: Issue 219 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2440 label: "revise superclasses - no hierarchical relation between gene-level dis\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2441 label: rename alpha-actinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2442 label: 'split term: MONDO_0009711 Myopathy, congenital, with fiber-type disproportion ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2443 label: fix xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2445 label: remove kboom and ontobio - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2446 label: All OMIM related synonyms to exact - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2447 label: remove mentions of ontobio - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2448 label: remove kboom annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2449 label: remove mentions of ontobio - id: https://api.github.com/repos/monarch-initiative/mondo/issues/245 label: Issue 216 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2450 label: add synonym to Meckel syndrome 13 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2451 label: add synonym to 'nephrotic syndrome 14' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2452 label: add syns to nephrotic syndrome 15 and 16 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2453 label: remove ontobio mentions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2454 label: obsolete neuronopathy, distal hereditary motor, type 5A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2455 label: obsolete MRX52 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2456 label: obsolete diabetes mellitus, noninsulin-dependent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2457 label: Clark-Baraitser syndrome OMIM Xref update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2458 label: '[Revise subclass] early-onset autosomal dominant Alzheimer disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2459 label: merge duplicate synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/246 label: 'Split autoimmune disease and MONDO_0007179 ''hypersensitivity reaction type II disease'' is ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2460 label: onset axioms for PD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2461 label: '[Open Targets] Add synonyms from Genomics England phenotypes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2462 label: Fibrous dysplasia[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2463 label: remove syn - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2464 label: "remove xref annotation from 'Ehlers-Danlos syndrome, kyphoscoliotic t\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2465 label: add check to xref annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2466 label: "add synonym to 'resistance to thyroid hormone due to a mutation in th\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2467 label: obsolete intellectual disability, X-linked, syndromic, Borck type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2468 label: "obsolete inborn disorder of urea cycle metabolism and ammonia detoxif\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2469 label: obsolete cardiomyopathy dilated with conduction defect type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/247 label: Issue 214 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2470 label: exclude subclass from 'mitochondrial trifunctional protein deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2471 label: add synonyms to kyphoscoliotic Ehlers-Danlos syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2472 label: revise synonyms for epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2473 label: merge amyloidosis nodular localized cutaneous - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2474 label: 'vitreoretinal degeneration MONDO:0020248 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2475 label: merge 'spinocerebellar ataxia, autosomal recessive 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2476 label: revise Orpha xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2477 label: add superclass to 'early-onset autosomal dominant Alzheimer disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2478 label: "relabel MONDO:0017241 to AP4-related intellectual disability and spas\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2479 label: PBAT, obsoleted, no replacement - id: https://api.github.com/repos/monarch-initiative/mondo/issues/248 label: 'WIP: immune diseases' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2480 label: Rajab interstitial lung disease with brain calcifications, obsoleted - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2481 label: '[NTR] MULTIPLE CONGENITAL ANOMALIES-HYPOTONIA-SEIZURES SYNDROME 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2482 label: '[NTR] X-linked recessive mitochondrial myopathy, lactic acidosis, cognitive impairment and autistic features' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2483 label: add synonym to MONDO:0032808 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2484 label: revise obs orpha xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2485 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2486 label: reclassify 'congenital disorder of glycosylation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2487 label: add new term Heimler syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2488 label: add syn to MONDO:0100138 X-linked recessive mitochondrial myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2489 label: add new term MONDO:0100230 long COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/249 label: Issue 218 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2490 label: update relation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2491 label: update relation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2492 label: Use gencc associations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2493 label: Fatty acyl-coA reductase 1 dysregulation[NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2494 label: Obsolete 'unclassified' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2495 label: 'split: skin basal cell carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2496 label: bc neoplasm bs skin carcinoma split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2497 label: '[Revise subclass] HP:0002140 Ischemic stroke move within stroke disorder, add definition' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2498 label: Add @hrshdhgd as contributor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/25 label: question about MONDO:0010859 atrioventricular septal defect 3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/250 label: Issue 217 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2502 label: '[Revise subclass] sex-cord gonadal tumor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2503 label: various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2504 label: ecto_import is inconsistent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2505 label: " MONDO:0005258, \u201CAutism spectrum disorder\u201D" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2506 label: MONDO:0005380 Osteonecrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2507 label: split POAG - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2508 label: revise seeding mechanism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2509 label: review eye carcinoma class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/251 label: Issue 215 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2510 label: bilateral striopallidodentate calcinosis MONDO:0008947 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2511 label: Errors on bilateral striopallidodentate calcinosis MONDO:0008947 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2512 label: acute adenoiditis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2513 label: Investigate the GTR xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2514 label: Medgen fails currently because of a small number of wrong ids - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2515 label: MONDO:0020802 is obsolete with subclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2517 label: Updateing all matches in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2518 label: attaching a list of CUI from UMLS in the december release that are not current in UMLS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2519 label: add new term MONDO:0100230 fatty acyl-CoA reductase 1 dysregulation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/252 label: Add OWL definitions for chromosomal abnormalities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2520 label: 48, XXYY syndrome (MONDO:0015028) incorrect exactmatch MeSH ID:D007713 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2521 label: '[Obsolete]MONDO:0008220, pepsinogen 3, group 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2522 label: '[Obsolete] MONDO:0011204' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2523 label: add new classes ''psoriatic arthritis, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2524 label: '[NTR] Paroxysmal familial ventricular fibrillation ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2525 label: fix xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2526 label: add new classes ''psoriatic arthritis, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2527 label: revise annotations for 'basal ganglia calcification, idiopathic, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2528 label: rename and reclassify acute tonsillitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2529 label: remove obsolete parent class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/253 label: Atrial Tachyarrhythmia With Short Pr Interval - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2530 label: "create new class MONDO:0100234 paroxysmal familial ventricular fibril\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2531 label: OMIMPS:125310 AND MONDO:0007432 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2532 label: MONDO:0000128 "Giant axonal neuropathy" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2533 label: '[Merge] MONDO:0000170 and MONDO:0010303' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2534 label: MONDO:0000865 congenital fiber-type disproportion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2535 label: rules assigning XRefs to Orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2536 label: left bundle branch block/hemiblock - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2537 label: add description - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2538 label: revise label xrefs for MONDO:0007432/CADASIL - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2539 label: New OMIM terms 23. Jan 2021 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/254 label: obsoletion of rare-X terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2540 label: New ORDO terms 23.01.2021 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2541 label: '[NTR] Shrinking lung syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2542 label: familial hypoaldosteronism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2543 label: Epilepsy, idiopathic generalized and OMIM's cross references - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2544 label: MONDO:0002010 FG Syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2545 label: Rolandic epilepsy MONDO:0007295 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2546 label: MONDO:0007245 neurofibromatosis type 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2547 label: '[NTR] Overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2548 label: New OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2549 label: New ORDO slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/255 label: 'Creation of a new Nervous system class: Complex Neurodevelopmental Disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2550 label: create design pattern for cancer chromosomal locations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2551 label: move OMIMPS to correct term ('familial hyperaldosteronism') - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2552 label: OMIMPS:311360 and ovarian failure - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2553 label: Roberts-SC phocomelia syndrome/ESCO2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2554 label: Noonan-like syndrome(s) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2555 label: revise OMIMPS 'inherited primary ovarian failure' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2556 label: add new terms - OMIM slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2557 label: fix some duplicate synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2558 label: MONDO:0007522 Ehlers-Danlos syndrome, classic type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2559 label: '[NTR] Respiratory syncytial virus bronchiolitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/256 label: "added new class MONDO_0100038 complex neurodevelopmental disorder, an\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2562 label: 'split term: Waldenstrom macroglobulinemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2563 label: Create disease_series_by_translocation.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2564 label: move xref for 'Ehlers-Danlos syndrome type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2565 label: fix multiple typos in MONDO:0007245 neurofibromatosis type 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2566 label: fix classification of 'paroxysmal nonkinesigenic dyskinesia 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2567 label: pav:status on patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2568 label: "Rename disease_series_by_gene_and_inheritance to disease_series_by_ge\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2569 label: add subclassOf axiom to OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/257 label: Issue 202 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2570 label: Reordered all the patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2571 label: obsoleted various ordo_group_of_disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2572 label: fix duplicate scoped syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2573 label: fixes all remaining patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2574 label: Update genetic.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2575 label: 'MONDO:0009710 myotonia congenita ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2576 label: Congenital intrinsic factor deficiency MONDO:0009852 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2577 label: '[Merge] ''amyotrophic lateral sclerosis type 17''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2578 label: 'split term: MONDO_0016643 ''frontonasal dysplasia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2579 label: '[Merge] Freire-Maia odontotrichomelic syndrome MONDO:0023191 and odontotrichomelic syndrome MONDO:0010111' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/258 label: Issue 201 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2580 label: Wilson-Turner Syndrome MONDO:0010665 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2581 label: MONDO:0012455 Kleefstra syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2582 label: 'NP: traumatic X' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2585 label: remove incorrect xref on 'disease or disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2586 label: fix typos on 'autosomal recessive cutis laxa type 2, classic type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2587 label: '[Relabel] Remove "Hypermethioninemia due to" from disease entity' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2588 label: "add new term MONDO:0100248 rapidly progressive primary central nervou\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2589 label: split 46,XX testicular disorder of sex development - id: https://api.github.com/repos/monarch-initiative/mondo/issues/259 label: various edits - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2590 label: '[Merge] MONDO_0043181 ''Refsum disease with increased pipecolic acidemia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2591 label: exclude adult Refsum disease as superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2592 label: reclassify 'periodontitis, aggressive, 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2593 label: reclassify MONDO:0012551 alopecia areata 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2594 label: reclassify immunodeficiency 61 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2595 label: Bioportal version not current - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2596 label: autosomal dominant polycystic kidney disease (MONDO:0004691) incorrect exactMatch UMLS CN119611 (not found) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2597 label: Spastic Diplegia Cerebral Palsy or spastic diplegia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2599 label: rename MONDO:0009151 cleft lip/palate-ectodermal dysplasia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/26 label: issue with MONDO:0018874 acute myeloid leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/260 label: GJB2 disease term request - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2600 label: revise def of 'rare' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2601 label: rename 'atrial septal defect' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2602 label: add superclass to 'fatal infantile encephalocardiomyopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2604 label: add syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2605 label: add def to MONDO:0030045 Liberfarb syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2606 label: remove superclass from 'ehlers-danlos syndrome, arthrochalasia type, 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2607 label: obsolete cerebellar degeneration-related autoantigen 3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2608 label: missing logical definitions from mondo.obo file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2609 label: migrate from Travis to GitHub actions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/261 label: Creation of broader disease entity forGATA2 related disorder(s) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2610 label: obsolete pepsinogen 3, group 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2611 label: Mass removal of related syns where there are exact syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2612 label: reclassify OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2613 label: fix subclassOf assertion on 'cervical intraepithelial neoplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2614 label: 'split term: MONDO_0010898 ''Autosomal dominant epilepsy with auditory features''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2615 label: reclassify children of temporal lobe epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2616 label: reclassify children of 'familial tumoral calcinosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2617 label: obsolete Refsum disease with increased pipecolic acidemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2618 label: Predisposes to X should never be subclass to X - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2619 label: Mondo Pattern Library 2.0 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/262 label: 'NTR: wet and dry age related macular degeneration' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2620 label: Remove final fixes on related/exact syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2621 label: MeSH query when ExactMatch same for two MONDO IDs amyopathic dermatomyositis MONDO:0043317 and juvenile dermatomyositis MONDO:0008054 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2622 label: Fix imports by removing individuals - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2623 label: Issue 962 - address OMIM subsumptions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2624 label: reclassify peho-like syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2625 label: "exclude superclasses (spondyloepiphyseal dysplasia with congenital jo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2626 label: reclassify children of 'Usher syndrome type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2627 label: split tumoral calcinosis, hyperphosphatemic, familial, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2628 label: split benign paroxysmal positional nystagmus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2629 label: OMIM synonym scope needs review - id: https://api.github.com/repos/monarch-initiative/mondo/issues/263 label: add synonym to multiple organ failure MONDO_0043726 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2630 label: need a check for cases of duplicate xrefs on Mondo terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2631 label: ' OMIM synonyms should be broken into synonyms - main term and abbreviation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2632 label: '[Revise subclass] Revise subclasses of peroxisomal disease (MONDO:0019053) (ClinGen request)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2633 label: reclassify 'progressive supranuclear palsy' children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2634 label: 'split term: insomnia (disease) MONDO_0013600' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2635 label: move pseudo-TORCH syndrome 1 to type 1 class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2636 label: Replaced curies should not be literals - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2637 label: Lennox-Gastaut syndrome MONDO:0016532 incorrect exactmatch MeSH C535500 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2638 label: mucopolysaccharidosis type 4 MONDO:0018938 incorrect exactmatch UMLS C0086651 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2639 label: MONDO:0012292 /susceptibility to hepatitis C - id: https://api.github.com/repos/monarch-initiative/mondo/issues/264 label: 'update def of MONDO_0005260 Autism (disease)? ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2640 label: remove incorrect xref from 'mucopolysaccharidosis type 4A' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2641 label: remove incorrect syn from 'tricho-hepato-enteric syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2642 label: revise xref annotation on juvenile dermatomyositis MONDO:0008054 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2643 label: revise xref annotation on 'mucolipidosis type III' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2644 label: make UMLS:CN200685 equivalentObsolete on Rolandic Epillepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2645 label: obsolete Goldenhar syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2646 label: add MESH xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2647 label: add MESH xref to 'pseudohypoparathyroidism type 1A' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2648 label: '[Merge] MONDO:0006772 ''glycogen storage disease VIII''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2649 label: add superclass to 'Aarskog-Scott syndrome, X-linked' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/265 label: added new term tendinopathy (MONDO_0100010) - ready to merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2650 label: update source on 'CBL-related disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2651 label: update xref for 'autosomal dominant polycystic kidney disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2652 label: rename MONDO_0005578 'arthritic joint disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2653 label: create MONDO:0100255 adenosine kinase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2654 label: clean up xrefs for 'myotonia congenita' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2655 label: Issue 2618 Predisposes to X should never be subclass to X - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2656 label: 'MELANOMA, UVEAL ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2657 label: '[NTR/TCF12]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2658 label: Split OMIM and remove some more EXACT/RELATED cases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2659 label: '[NTR/TWIST1]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/266 label: Issue 175- added new Mast cell activation syndrome terms - ready to merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2660 label: OMIM terms should use primary OMIM label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2661 label: Broken link at https://mondo.monarchinitiative.org/ - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2662 label: review classes in subset ordo_group_of_disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2663 label: Extrahepatic biliary atresia (OMIM 210500)[NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2664 label: 'split term: hyperphosphatemic familial tumoral calcinosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2665 label: congenital neuronal ceroid lipofuscinosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2666 label: 'WIP: reclassify terms for peroxisome biogenesis disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2667 label: '[Revise text def]MONDO:0019903' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2668 label: '[Merge]PGBM1/MONDO:0014389 /MONDO:0018348' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2669 label: Add a test branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/267 label: Issue 79.11 - ready to merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2670 label: '[NTR]: X-linked intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2679 label: Test inherited - id: https://api.github.com/repos/monarch-initiative/mondo/issues/268 label: updated label for MONDO_0021683 (fixed typo) - ready to merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2680 label: Issue 2609 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2681 label: Handle directSiblingOf - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2682 label: '[NTR] new OMIM and Orphanet terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2683 label: ILFS2 and ORPHA:464724 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2684 label: 'split term: MONDO:0009989 and Goldmann-Favre syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2685 label: rename and reclassify 'vertigo, benign recurrent, 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2686 label: 'split term: ''benign paroxysmal positional nystagmus''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2687 label: make lay description annotation property and coordinate with GARD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2688 label: rename MONDO:0008050 MYH7-related skeletal myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2689 label: 'rename ''unclassified acute myeloid leukemia'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/269 label: Curies in definitions and synonyms instead of labels, eg (allergy of FOODON:00001248) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2690 label: '[Merge] MONDO:0019663 and MONDO:0013127' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2691 label: '[Merge]MONDO:0010261 and MONDO:0017125' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2692 label: fix nav for mondo editors guide - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2693 label: OrphaNet IDs and one (of multiple) OMIM IDs lumped into same term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2694 label: split Waldenstrom macroglobulinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2695 label: rename MONDO:0014659 infantile liver failure syndrome 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2696 label: add new term MONDO:0035112 acute myeloid leukemia with BCR-ABL1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2697 label: add subclassOf assertion to 'ascorbic acid deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2698 label: move xrefs to 'Kleefstra syndrome 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2699 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/27 label: 'Should ALG13-CDG be a subClass of EIEE? (more generally: PS vs ORDO)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/270 label: 'NTR: acetazolamide-responsive episodic ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2700 label: 'move synonyms: ''avascular necrosis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2701 label: exclude neoplasm as parent for 'Zollinger-Ellison syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2702 label: remove comment from MONDO:0024462 familial cutaneous melanoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2703 label: rename MONDO:0007399 TWIST1-related craniosynostosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2704 label: '[Open Targets] Add synonyms from Genomics England phenotypes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2705 label: '[Merge] MONDO:0024548 and MONDO:0016992' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2706 label: "Relabel \u2018spondyloepiphyseal dysplasia, Maroteaux type\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2707 label: add synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2708 label: "revise label for MONDO:0008473 spondyloepimetaphyseal dysplasia, Maro\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2709 label: 'new term: ''Roberts-SC phocomelia syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/271 label: Epileptic encephalopathy, infantile or early childhood - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2710 label: revise parent for 'migraine, familial hemiplegic, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2711 label: reclassify terms - children of 'disease or disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2712 label: "add new term MONDO:0100283 overgrowth syndrome and/or cerebral malfor\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2713 label: add new term MONDO:0100284 X-linked intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2714 label: revise defs for ring chromosome terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2715 label: add syn to long COVID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2716 label: add new term MONDO:0100285 extrahepatic biliary atresia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2717 label: '[Obsolete] MONDO_0028737 ''biliary atresia disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2718 label: add new term MONDO:0100286 respiratory syncytial virus bronchiolitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2719 label: merge colobomatous microphthalmia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/272 label: 'NTR: Hypereosinophilia of undetermined significance' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2720 label: merge fibrous dysplasia of bone - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2721 label: merge Clark-Baraitser syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2722 label: merge Freire-Maia odontotrichomelic syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2723 label: merge amyotrophic lateral sclerosis type 17 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2724 label: obsolete bone deterioration disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2725 label: Merge terms and add synonyms - open targets request - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2726 label: ALG9 and ADPKD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2727 label: 'thrombocytopenia-absent radius syndrome MONDO:0010121 closeMatch to exactMatch for MeSH: C536940' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2728 label: Issue 2619 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2729 label: revise xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/273 label: 'added new term: MONDO_0100052 ''acetazolamide-responsive episodic ataxia'' - ready to merge' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2730 label: rename OMIM terms to match OMIM label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2731 label: 'WIP: obsolete orphanet grouping classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2732 label: Mondo.owl does not show all inference in the top level of the class hierarchy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2733 label: Merge MONDO:0012215 and MONDO:0008032? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2734 label: change xref scope on 'spinocerebellar ataxia type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2735 label: revise label for MONDO:0010758 Wieacker-Wolff, X-linked recessive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2736 label: add def to eosinophil peroxidase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2737 label: mass obsoletion of ORDO grouping terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2738 label: 'Mondo: formal protocol for obsoletions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2739 label: review subclasses that are supported only by EFO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/274 label: 'ready to merge: added defs to GARD terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2740 label: '[Revise subclass] ''Cogan syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2741 label: '[Revise hierarchy] According to Harrison''s Principles of Internal Medicine, 20e' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2742 label: "Rename \u2018Carpenter syndrome 1\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2743 label: "Rename \u2018Carpenter syndrome 2\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2744 label: split enhanced S-cone syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2745 label: add documentation about splitting OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2746 label: add new term MONDO:0100285 extrahepatic biliary atresia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2747 label: policy for when a MIM number becomes gene-specific - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2748 label: split Waldenstrom macroglobulinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2749 label: '[Obsolete] ''chorea minor''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/275 label: Issue 238 - ready to merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2750 label: reclassify terms according to Harrison's - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2751 label: relabel MONDO:0008710 and MONDO:0013998 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2752 label: add superclass to Cogan syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2753 label: Replace all abbreviation terms with full names - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2754 label: update def of autism (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2755 label: add syn to contracture - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2756 label: Normalise see also to anyURI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2757 label: revise xref source annotations on 'classic Hodgkin lymphoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2758 label: OMIM slurp March 2021 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2759 label: '[Revise subclass] SIDS ! MONDO:0010086 subclass of Mendelian disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/276 label: 'NTR: chronic idiopathic urticaria' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2760 label: Question - Using Mondo to get a list of mendelian disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2761 label: Just for testing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2762 label: Colon Serrated Polyposis [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2763 label: Early T cell progenitor acute lymphoblastic leukemia [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2764 label: add OMIMPS to macroglobulinemia, waldenstrom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2766 label: MONDO:0100096 COVID-19 obsoleted exactmatch MeSH ID C000657245 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2767 label: '[Merge] MONDO:0012632 and MONDO:0011401' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2768 label: ' MONDO:0019313 "hereditary lymphedema" Clean up request' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2769 label: Update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/277 label: 'NTR: Thalassemia minor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2771 label: remove OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2772 label: Update f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2773 label: Create release-protege-look.jpg - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2774 label: 'issues with ReadtheDocs - changes are not showing up ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2775 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2776 label: Make reasoning checks slightly stricter - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2777 label: revise xref for COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2778 label: add new term MONDO:0100290 colon serrated polyposis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2779 label: Fixes weird serialisation problem we were having with an obsolete - id: https://api.github.com/repos/monarch-initiative/mondo/issues/278 label: Obsolete parent terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2780 label: mass obsolete allergy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2781 label: revise familial cancer terms to susceptibility - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2782 label: website edits needed - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2783 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2784 label: familial cancers (from OMIM or NCIT) should conform to the susceptibility pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2785 label: rename MONDO:0023113 colorectal cancer susceptibility - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2786 label: Proxy merges when importing equvalencies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2787 label: Issue 2619 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2788 label: 'typo: Orange Allery' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2789 label: Cataract-glaucoma syndrome, cataract-glaucoma [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/279 label: Potential reclassification of genetic cardiac tumor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2790 label: Revert "revise familial cancer terms to susceptibility" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2791 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2792 label: "add new term MONDO:0100291 early T cell progenitor acute lymphoblasti\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2793 label: add OMIMPS MONDO:0031230 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2794 label: QC check - check synonyms use dbxref and not source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2795 label: add OMO import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2796 label: Update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2797 label: Adding OMO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2798 label: revise labels to 'intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2799 label: 'fix Proxy merges: Issue 2786' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/28 label: merge children of EIEE1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/280 label: A few more potential reclassifications? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2800 label: add GCI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2801 label: exclude subclass for SIDS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2802 label: add equiv axiom and exclude superclass for '14q32 duplication syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2803 label: Update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2804 label: '[Obsolete] MONDO_0020671 ''obsolete susceptibility to ischemic stroke''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2805 label: obsolete susceptibility to ischemic stroke - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2806 label: short-rib thoracic dysplasia 7/ short rib-polydactyly syndrome type 5 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2807 label: ' Friedreich ataxia MONDO:0009245' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2808 label: OMIM "included" entries and not the preferred names on MONDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2809 label: MONDO:0044808 and MONDO:0007492 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/281 label: Merge items - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2810 label: Last remaining OMIM terms for March - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2811 label: obsolete glycogen storage disease VIII - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2812 label: obsolete oculomotor apraxia or related oculomotor disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2813 label: obsolete heart block terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2814 label: obsolete chorea minor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2815 label: obsolete sudden infant death syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2816 label: merge autosomal dominant limb-girdle muscular dystrophy type 1A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2817 label: obsolete Alzheimer disease 15 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2818 label: merge cataract - glaucoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2819 label: obsolete short rib-polydactyly syndrome type 5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/282 label: tongue squamous cell carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2820 label: merge peeling skin syndrome type B - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2821 label: merge Hauptmann-Thannhauser muscular dystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2822 label: obsolete early onset primary dystonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2823 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2824 label: '[Obsolete] ''unclassified cardiomyopathy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2825 label: neuronal ceroid lipofuscinosis 6/4A ? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2826 label: Visceral/total heterotaxy? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2827 label: MONDO:0021533 intestinal neuroendocrine tumor G1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2828 label: 'split term: mitochondrial DNA depletion syndrome 12' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2829 label: MIM 614204 names spread across multiple MONDO concepts - id: https://api.github.com/repos/monarch-initiative/mondo/issues/283 label: 'NTR: Coffin-Siris syndrome 6' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2830 label: "review Guillain-Barr\xE9 syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2831 label: edit syns for GBS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2832 label: 'add check to stop diseases like this from rising up to the top ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2833 label: fix 'terms merged' individual - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2834 label: Bump jinja2 from 2.10.1 to 2.11.3 in /docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2835 label: 'Merge pull request #1 from monarch-initiative/master' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2836 label: MONDO:0008820 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2837 label: Terms merged bug - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2838 label: Remove alt_ids where there is an obsolete class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2839 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/284 label: 'NTR: Coffin-Siris syndrome 7' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2840 label: 'split term: alopecia universalis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2841 label: UMLS with CN prefixed ids are incorrect throughout... i think - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2842 label: MONDO:0015601 X-linked intellectual disability, van Esch type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2843 label: MONDO:0019425 and MONDO:0010574 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2844 label: "X-linked Hypophosphatemic Rickets (NCIT:C123265)\t" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2845 label: '[NTR] NEDMILG/Neurodevelopmental Disorder with Microcephaly, Impaired Language, and Gait Abnormalities' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2846 label: merge oculofaciocardiodental syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2847 label: MONDO:0012324, 14q22q23 microdeletion syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2848 label: obsolete biliary atresia disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2849 label: merge short rib-polydactyly syndrome, Saldino-Noonan type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/285 label: 'NTR: Posterior Polymorphous Corneal Dystrophy 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2850 label: MONDO:0002520 acute hepatic porphyria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2851 label: merge May-Hegglin anomaly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2852 label: MONDO:0009317, nonphotosensitive trichothiodystrophy ORPHA X-ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2853 label: merge congenital fiber-type disproportion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2854 label: rename MONDO:0012324 Frias syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2855 label: rename MONDO:0002520 hepatic porphyria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2856 label: obsolete nonphotosensitive trichothiodystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2857 label: '[Merge]''deafness-enamel hypoplasia-nail defects syndrome'' and Heimler syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2858 label: Typo in synonyms of MONDO:0008780 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2859 label: Create disease_series_by_gene_grouping_class.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/286 label: 'NTR: Craniosynostosis 7' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2860 label: Bump pyyaml from 5.1 to 5.4 in /docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2861 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2862 label: MONDO:0012048 endogenous depression/OMIM:608516 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2863 label: OMIM:614163 (DELAYED SLEEP PHASE DISORDER, SUSCEPTIBILITY TO; DSPD) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2864 label: ' ectrodactyly polydactyly [Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2865 label: temp - do not merge (ataxia changes) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2866 label: 'NTR: atactic disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2867 label: 'new term: MONDO:0100308 atactic disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2868 label: MONDO:0011645 aneurysmal bone cysts & MONDO:0018815 aneurysmal bone cyst (disease)[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2869 label: MONDO:0011727 anorexia nervosa, susceptibility to, 1[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/287 label: 'NTR: Early infantile epileptic encephalopathy 55' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2870 label: MONDO:0014160 - add synonym & description - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2871 label: Bump pygments from 2.4.2 to 2.7.4 in /docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2872 label: add description to acute.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2873 label: Update adenoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2874 label: Update adenosquamous_carcinoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2875 label: Update adenocarcinoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2876 label: Update adult.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2877 label: Update autoimmune.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2878 label: Update autoimmune_inflammation.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2879 label: Update acute.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/288 label: 'NTR: Early infantile epileptic encephalopathy 59' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2880 label: Update childhood.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2881 label: Update congenital.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2882 label: Update chronic.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2883 label: Update autosomal_recessive.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2884 label: Update consequence_of_infectious_disease.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2885 label: Update carcinoma_in_situ.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2886 label: Update neuroendocrine_neoplasm_grade1.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2887 label: Update mucoepidermoid_carcinoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2888 label: Update meningioma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2889 label: Update melanoma.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/289 label: 'NTR: Early infantile epileptic encephalopathy 61' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2890 label: Update malignant.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2891 label: '[Obsolete pattern] genetic.yaml' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2892 label: merge infantile neuroaxonal dystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2893 label: review infectious disease DP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2894 label: revise COVID-19 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2895 label: Updated Pattern matches - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2896 label: revisions to COVID-19 hierarchy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2897 label: Update pattern docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2898 label: revise familial long QT syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2899 label: Add actions to generate pattern docs when master is updated - id: https://api.github.com/repos/monarch-initiative/mondo/issues/29 label: Consider split of Ohtahara syndrome and EIEE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/290 label: 'NTR: Early infantile epileptic encephalopathy 62' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2900 label: MONDO:0014195 relabel microcornea-myopic chorioretinal atrophy-telecanthus syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2901 label: add new COVID-19 terms/revise the hierarchy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2902 label: change def of VHF - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2903 label: Create infectious_disease_and_sequelae_by_agent.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2904 label: Adding view generation pipeline and harrison view - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2905 label: 'changing relation to match infectious pattern. #2893' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2906 label: Proposed Change to Subclassifications of Hypophosphatasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2907 label: Typos in synonyms of MONDO:0006785 Henoch-Schoenlein purpura - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2908 label: release-2021-04-07 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2909 label: Create regex.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/291 label: 'NTR: Elliptocytosis 3' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2910 label: Please delete axioms pointing to obsolete classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2911 label: remove axioms pointing to obsolete classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2912 label: Revise definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2913 label: About 50 duplicate scoped syns remaining - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2914 label: Move ROBOT report to fail on ERROR - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2915 label: Migrate ROBOT report to Fail On Error - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2916 label: ROBOT report April 2021 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2917 label: fix duplicate def - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2918 label: fix defs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2919 label: fix duplicate synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/292 label: 'NTR: Exudative vitreoretinopathy 7' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2920 label: Last fixes for ROBOT report - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2921 label: 'DO NOT merge: just to run some tests' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2922 label: OMIM:300100, Adrenoleukodystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2923 label: MONDO:0054559 CDGIIq and COG2-CDG [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2924 label: 'xref issue: MONDO_0100096 (reported via email)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2925 label: fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2926 label: '[Merge] MONDO:0000212 AND MONDO:0007749' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2927 label: relabel term microcornea-myopic chorioretinal atrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2928 label: revise xrefs for 'X-linked adrenoleukodystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2929 label: add logical def to 'anorexia nervosa, susceptibility to, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/293 label: 'NTR: Fanconi Anemia Complementation Group S' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2930 label: 'need to ingest OMIA classes ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2931 label: MONDO:0003157 Gorham disease [Rename] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2932 label: Orphanet:182067 move to Glioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2933 label: MONDO:0016824 (infantile) myofibromatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2934 label: New term request "Familial hemophagocytic lymphohistiocytosis" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2935 label: Antenatal Bartter syndrome [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2936 label: episodic kinesigenic dyskinesia/ Orpha:98809 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2937 label: add source to Krabbe disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2938 label: congenital rubella (syndrome) [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2939 label: Duplicate exact synonyms spring clean - id: https://api.github.com/repos/monarch-initiative/mondo/issues/294 label: 'NTR: Fanconi Anemia Complementation Group W' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2940 label: OMIM April 2021 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2941 label: Cd4/CD8 T-cell ratio is not a disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2942 label: Bombay phenotype is not a disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2943 label: B-cell growth factor is not a disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2944 label: hereditary/congenital factor X deficiency cross-references - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2945 label: '[NTR] SEC61A1 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2946 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2947 label: OMIM ingest - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2948 label: "MONDO:0020754 \u201Cvisceral myopathy\u201D [Revise subclass]" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2949 label: OMIM:223100 ref on Lactose intolerance terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/295 label: 'NTR: GINGF5' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2950 label: new classification/modeling for infectious diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2951 label: MONDO:0022672 autosomal dominant cataract [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2952 label: attempt at new classification for viral infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2953 label: revise logical defs from occupational lung disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2954 label: 'revise pattern: environmental_stimulus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2955 label: revise syn scope for vasculitis due to ADA2 deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2956 label: Proposal for managing naming conventions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2957 label: need to make sure synonym patterns are not equivalent to the label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2958 label: fix dbxref and not source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2959 label: Update realized_in_response_to_environmental_exposure.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/296 label: 'NTR: Geleophysic Dysplasia 3' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2960 label: 'review pattern: environmental_stimulus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2961 label: MONDO:0010470 Baratela-Scott syndrome [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2962 label: MONDO:0018999 LCAT deficiency [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2963 label: MONDO:0018988 Iridocorneal endothelial syndrome [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2964 label: add ID ranges - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2965 label: MONDO:0026767 capitalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2966 label: reclassify 'iridocorneal endothelial syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2967 label: revise xref for 'factor X deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2968 label: add new term SEC61A1 deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2969 label: add superclass to 'familial visceral myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/297 label: 'NTR: Glucocorticoid Deficiency 5' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2970 label: fix capitalization MONDO:0026767 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2971 label: SPLIT term Friedreich ataxia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2972 label: '[NTR] down syndrome children' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2973 label: move xref from malignant glioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2974 label: add syn and def to MONDO:0014160 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2975 label: "revise synonym scope for 'X-linked intellectual disability, van Esch \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2976 label: move xref from malignant glioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2977 label: create new term MONDO:0100343 antenatal Bartter syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2978 label: move OMIM xref to 'lactose intolerance adult type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2979 label: Synonyms that equal a label should be removed - id: https://api.github.com/repos/monarch-initiative/mondo/issues/298 label: 'NTR: Hyperekplexia 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2980 label: MONDO:0001948 Riedel's fibrosing thyroiditis [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2981 label: MONDO:0004620 and MONDO:0020330 [Merge?] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2982 label: '[NTR] Glutaminase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2983 label: Creation of new poisoning pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2984 label: Create substance_abuse.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2985 label: add superclass to vulvovaginitis, allergic seminal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2986 label: move xref on carcinoid syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2987 label: Proposal for systematically excluding annotations from release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2988 label: make sure synonyms annotated w/ EXCLUDE are removed/deleted from the release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2989 label: add OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/299 label: 'NTR: KTCN9' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2990 label: add equiv axiom to 'adult astrocytic tumour' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2991 label: add Kallia - id range - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2992 label: Add comment to ARDS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2993 label: test edit by Kallia. DO NOT MERGE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2994 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2995 label: "add term MONDO:0100348 neurodevelopmental disorder with microcephaly,\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2996 label: Ensuring that excluded synonyms are excluded at release time - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2997 label: Mark synonyms that are equivalent to the label. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2998 label: Marking synonyms for exclusion from Mondo release if they are equal to label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/2999 label: reclassify micropthalmia, Lenz type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3 label: sparql query to generate equivalence axioms not working - id: https://api.github.com/repos/monarch-initiative/mondo/issues/30 label: X-linked ID, Cabezas type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/300 label: 'NTR: Meckel Syndrome, Type 13' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3000 label: classic Hodgkin lymphoma, mixed cellularity type MONDO:0020328[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3001 label: MONDO:0004604 & MONDO:0020329 lymphocyte rich Hodgkin lymphoma [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3002 label: Create poisoning.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3003 label: Create substance_abuse.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3004 label: Create substance_dependence.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3005 label: SPARQL redo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3006 label: Update realized_in_response_to_environmental_exposure.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3007 label: Update environmental_stimulus.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3008 label: Create substance_dependence.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3009 label: 'OMIM: some missing terms that were erroneously filtered' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/301 label: 'NTR: Meier-Gorlin Syndrome 8' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3010 label: release 2021-04-30 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3011 label: OMIM ingest - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3012 label: obsolete Cd4/CD8 T-cell ratio - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3013 label: obsolete Bombay phenotype - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3014 label: obsolete B-cell growth factor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3015 label: add xrefs to X-linked hypophosphatemic rickets - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3016 label: merge/obsolete deafness-enamel hypoplasia-nail defects syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3017 label: merge congenital rubella - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3018 label: Revised definition MONDO:0009397 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3019 label: Renamed MONDO:0015667 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/302 label: 'NTR: Mosaic Variegated Aneuploidy Syndrome 3' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3020 label: Add new term MONDO:0500000 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3021 label: revise xref for 'acute myeloid leukemia by FAB classification' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3022 label: move xref to 'episodic kinesigenic dyskinesia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3023 label: Added new term 'glutaminase deficiency' MONDO:0600001 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3024 label: Update README.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3025 label: "Added new terms for issue#2011 'hemorrhagic fever' and 'bacterial hem\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3026 label: '[NTR] new lung terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3027 label: add synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3028 label: Added new term venom allergy MONDO:0600005 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3029 label: Create chebi_terms.txt - id: https://api.github.com/repos/monarch-initiative/mondo/issues/303 label: 'NTR: Multiple Mitochondrial Dysfunctions Syndrome 5' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3030 label: Update import-terms-for-logical-axioms.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3031 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3032 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3033 label: Missing orphanet terms in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3034 label: Update a-protege-setup.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3035 label: Update CODEOWNERS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3036 label: Update import-terms-for-logical-axioms.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3037 label: fix GitHub actions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3038 label: Orphanet ingest - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3039 label: add botryomycosis term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/304 label: 'NTR: Multiple Mitochondrial Dysfunctions Syndrome 6' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3040 label: 3q29 microduplication syndrome definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3041 label: Obsoleted 'unclassified cardiomyopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3042 label: 'use Mondo to help merge OMIM and Orphanet for HPOA ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3043 label: Changed SubclassOf axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3044 label: Update definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3045 label: Updated definition for irritable bowel syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3046 label: Excluded superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3047 label: marfanoid syndrome, De Silva type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3048 label: revise definition for MONDO:0009120 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3049 label: remove logical axiom from 'venom allergy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/305 label: 'NTR: Multiple Synostoses Syndrome 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3050 label: Use OMIM terms as primary label and Orphanet labels should be synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3051 label: 'Suggested new pattern: Nutritional deficiency disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3052 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3053 label: obsolete ectrodactyly polydactyly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3054 label: add instructions on merging using owltools - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3055 label: Update regex.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3056 label: QC Pipeline redesign - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3057 label: Some Bug fixes to slurp pipeline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3058 label: Exporting SSSOM mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/306 label: 'NTR: Nephrotic Syndrome, Type 14' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3060 label: Insomnia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3061 label: occupation-related stress disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3062 label: disease by cell type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3063 label: Florid cemento-osseous dysplasia[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3064 label: cardiac tuberculosis[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3065 label: PrP systemic amyloidosis[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3066 label: atactic disorder[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3067 label: PANDAS[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3068 label: Relabel terms to use OMIM label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3069 label: Correct unexpected links to ENVO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/307 label: 'NTR: Nephrotic Syndrome, Type 15' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3070 label: Discordance betwen HDO DOID and MONDO xfref DOID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3071 label: removed superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3072 label: Add definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3073 label: review 'Jervell and Lange-Nielsen syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3074 label: revise errors - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3075 label: exclude superclass from PANDAS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3076 label: reclassify atatic disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3077 label: exclude superclass and add def PrP systemic amyloidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3078 label: reclassify Florid cemento-osseous dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3079 label: fix QC errors - id: https://api.github.com/repos/monarch-initiative/mondo/issues/308 label: 'NTR: Nephrotic Syndrome, Type 16' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3080 label: fix typo in substance dependence - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3081 label: New matches May 2021 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3082 label: rename MONDO:0030982 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3083 label: DO NOT MERGE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3084 label: '[Merge] MONDO_0015561 ''aleukemic mast cell leukemia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3085 label: '[Merge] MONDO_0015989 ''congenital valvular dysplasia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3086 label: 'Clarification Inquiry: Relationship Between MONDO and HPO (Human Phenotype Ontology)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3087 label: add superclass to 'occupational allergic alveolitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3088 label: refresh NCBI import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3089 label: MONDO:0018820 and MONDO:0014812[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/309 label: 'NTR: Orofaciodigital Syndrome Type 16' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3090 label: '[Merge] MONDO:0030965 and MONDO:0030961 Olmsted syndrome 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3091 label: ATP1A3- associated neurological disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3092 label: '[NTR/ERF] ERF-related craniosynostosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3093 label: add synonym to 'craniosynostosis 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3094 label: fix annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3095 label: Restructure dosdp import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3096 label: update poisoning PR with master - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3098 label: MONDO:0014849 autosomal recessive nonsyndromic deafness 105[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3099 label: MONDO:0014315 Mitchell-Riley syndrome[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/31 label: X-linked syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/310 label: 'NTR: Orofaciodigital Syndrome Type 17' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3100 label: progressive supranuclear palsy SCTID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3101 label: added new term 'cytokine release syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3102 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3103 label: relabel MONDO_0014805 '16p13.2 microdeletion syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3104 label: added and obsoleted terms under hypophosphatasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3105 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3106 label: rename Hao-Fountain syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3107 label: '[NTR] 0001 INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 65 (OMIM)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3108 label: nonepidermolytic palmoplantar keratoderma [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3109 label: add new down syndrome children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/311 label: 'NTR: Orofaciodigital Syndrome Type 18' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3110 label: MONDO:0008664 and MONDO:0006928[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3111 label: Alzheimer disease - exact match - Alzheimer disease pathway - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3112 label: Added logical definition and synonym to cork-handler's disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3113 label: inherited/primary Fanconi (renotubular) syndrome[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3114 label: MONDO:0022636/Candida glabrata - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3115 label: MONDO:0009641 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3116 label: disorder of GPI anchor biosynthesis (MONDO:0024321) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3117 label: add def to Friedreich ataxia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3118 label: 'Ready for review: revise viral infectious agent classification' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3119 label: add defs to Friedreich ataxia 1 and 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/312 label: 'NTR: Osteogenesis Imperfecta Type 18' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3120 label: release_2021-06-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3121 label: MONDO:0007704 osteoarthritis susceptibility 2 [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3122 label: MedDRA to MONDO cross-references - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3123 label: Multiple new terms as subclasses of qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan (MONDO:0016155) (ClinGen expert panel request) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3124 label: neurofibromatosis type 1 MONDO:0018975 has two exactMatch MeSH xrefs (one is obsolete) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3125 label: neurofibromatosis type 1 MONDO v MONARCH - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3126 label: release 2021-06-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3127 label: '[NTR] triad for trisomy 18' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3128 label: '[NTR] Trisomy 13 mosaicism' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3129 label: 'MeSH query when ExactMatch same for two MONDO IDs tuberous sclerosis complex MONDO:0019341 and tuberous sclerosis MONDO:0001734 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/313 label: 'NTR: Perrault Syndrome 6' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3130 label: 'Mondo-plus-NCIT-Cancer ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3131 label: relabel MONDO:0022636 candida glabrata infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3132 label: Update a-protege-setup.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3133 label: COVID definitions are inconsistent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3134 label: Collate annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3135 label: Develop a data model for common diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3136 label: Reverse proxy merges NCIT - make tickets at NCIT? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3137 label: MONDO-NCIT module - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3138 label: familial infantile bilateral striatal necrosis MONDO:0010080 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3139 label: desmoplastic medulloblastoma ? [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/314 label: 'NTR: Premature Ovarian Failure 13' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3140 label: Subclasses from NCIT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3141 label: MONDO:0010491 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3142 label: reclassify infectious disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3143 label: OMIM 160750 X-ref? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3144 label: 'Typo in MONDO:0014531 - the label is misspelt ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3145 label: fix typo in MONDO:0014531 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3146 label: Add osteoarthritis susceptibility subclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3147 label: Add lung disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3148 label: Update mondo-idranges.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3149 label: add synonym to long covid - id: https://api.github.com/repos/monarch-initiative/mondo/issues/315 label: 'NTR: Premature Ovarian Failure 14' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3150 label: "Add new term ALG9-associated autosomal dominant polycystic kidney dis\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3151 label: 'added new term : shrinking lung syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3152 label: add new term ATP1A3-associated neurological disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3153 label: update MONDO:0010491 subclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3154 label: OMIM slurp June - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3155 label: review classification of 'connective tissue disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3156 label: revise nutritional or metabolic disease classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3157 label: '[Obsolete] nutritional or metabolic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3158 label: '[NTR] Vanishing Lung (VLS)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3159 label: Adding in an axiom for niacin deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/316 label: 'NTR: Retinitis Pigmentosa 78' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3160 label: Review children of chromosomal anomaly (MONDO:0019040) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3161 label: 'New term class: Obstetric disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3162 label: 'new term: obstetric disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3163 label: '[Obsolete] disorder involving pain' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3164 label: "merge congenital multiple caf\xE9-au-lait macules-increased sister chrom\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3165 label: '[NTR] restrictive pulmonary disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3166 label: axiomatize MONDO:0021199, MONDO:0021194, MONDO:0024505 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3167 label: added 'equivalent to' axiom to MONDO:0021199, MONDO:0024505 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3168 label: '[Merge] glomuvenous malformation ?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3169 label: NTR idiopathic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/317 label: 'NTR: Retinitis Pigmentosa 79' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3170 label: review fibromyalgia classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3171 label: merge obsolete aneurysmal bone cysts - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3172 label: Thrombocythemia, X linked MONDO:0010301[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3173 label: Create idiopathic.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3174 label: 'remove from top level class: ''regional odontodysplasia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3175 label: 'remove from top level class: ''segmental odontomaxillary dysplasia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3176 label: 'remove from to level class: serpinopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3177 label: 'NTR: idiopathic' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3178 label: Added new term "idiopathic" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3179 label: '[NTR] Acute fibrinous and organizing pneumonia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/318 label: 'NTR: Retinitis Pigmentosa 80' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3180 label: SPARQL idiopathic terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3181 label: Added new term acute fibrinous and organizing pneumonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3182 label: added idiopathic disease or disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3183 label: tag Mondo terms with Clingen Preferred, where applicable - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3184 label: updated 'serpinopathy' SubClassOf - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3185 label: updated 'regional odontodysplasia' SubClassOf - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3186 label: 'add new term: alveolar capillary dysplasia without misalignment' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3187 label: update 'segmental odontomaxillary dysplasia' SubClassOf - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3188 label: '[NTR] Acinar dysplasia ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3189 label: add acinar dysplasia terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/319 label: 'NTR: Retinitis Pigmentosa 81' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3190 label: '[NTR] Congenital alveolar dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3191 label: DNA repair defect other than combined T-cell and B-cell immunodeficiencies [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3192 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3193 label: '[Revise subclass] missing neurodegenerative disease parent' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3194 label: Add superclass neurodegenerative disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3195 label: '[Revise subclass] DNA repair disorders' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3196 label: obsolete disorder involving pain - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3197 label: "merge metabolic encephalomyopathic crises, recurrent, with rhabdomyol\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/320 label: 'NTR: Schizophrenia 19' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3200 label: add OMIMPS to 'hereditary angioedema' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3201 label: '[Term]id: MONDO:0025986name: megacystis-microcolon-intestinal hypoperistalsis syndromexref: OMIMPS:249210 {source="MONDO:equivalentTo"} ! megacystis-microcolon-intestinal hypoperistalsis syndrome(note, For MONDO:0025986, I emailed the user list on 06/28/21. I will add these after the June release).' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3202 label: add new OMIM terms (OMIM slurp) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3203 label: '[NTR] herpesvirus-7 infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3204 label: '[Merge] MONDO_0005889 orthomyxoviridae infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3205 label: '[Merge] coxsackievirus infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3206 label: Changes matches in "other hierarchy" to related - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3207 label: '[Revise text def]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3208 label: revise def for polycystic liver disease 4 with or without kidney cysts - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3209 label: split familial hemophagocytic lymphohistiocytosis type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/321 label: same term? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3210 label: '[NTR] acute fibrinous and organizing pneumonia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3211 label: 'NEVER MERGE: Harrison 2021' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3212 label: Harrison intermediate - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3213 label: add new subset tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3214 label: merge viral infectious disease or sequela - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3215 label: Make "dehydratase deficiency" more specific - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3216 label: add grouping classes to infectious disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3217 label: new classification/modeling for infectious diseases Part 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3218 label: ordo_disease grouping should be moved under disease_grouping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3219 label: need design patterns for new infectious disease classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/322 label: 'added new terms:' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3220 label: move ordo_disease as a child of disease_grouping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3221 label: Add severity to peroxisome biogenesis disorder subtypes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3222 label: '[Obsolete] Heimler syndrome ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3223 label: Add new term MONDO:0500018 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3224 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3225 label: Add disease_grouping for all ordo_group_of_disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3226 label: Download Mondo and import owl into neo4j - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3227 label: Re-create docs.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3228 label: Test - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3229 label: 'Add QC: no owlaxiom header in mondo-edit.obo' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/323 label: 'isa-conflation: structural epilepsy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3230 label: Deleted empty 'consider' axiom on MONDO:0016606. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3231 label: add axiom to acute leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3232 label: remove the (disease) from Mondo labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3233 label: Add owl axioms check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3234 label: '[NTR] emergency medicine conditions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3235 label: rename class "cell proliferation disease" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3236 label: add harrison tag to 'endocrine system disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3237 label: add harrisons_view tag to appropriate terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3238 label: Relabel MONDO:0008135 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3239 label: Added PCBD1 deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/324 label: Unusual inference arising from is-a overloading from ORDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3240 label: '[Revise text def] latent viral infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3241 label: New pattern matches July 4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3242 label: Added equivalent axiom to 'acute leukemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3243 label: Missing synonym for MONDO:0013624 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3244 label: Fix bone resorption definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3245 label: renamed MONDO:0003157, added subclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3246 label: '[NTR] COVID-19-related coagulopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3247 label: (hyper)homocystinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3248 label: renamed 'cell proliferation disorder' (MONDO:0045024) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3249 label: '[NTR] hydrosalpinx' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/325 label: esinophilia with and without PDGFRA, PDGFRB or FGFR1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3250 label: relabel MONDO:0005135 parasitic infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3251 label: "relabel \u2018latent viral infectious disease\u2019 (MONDO:0100330)" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3252 label: disease has latent infectious agent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3253 label: rename property MONDO_0100333 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3254 label: "\u2018COVID-19 or sequela\u2019 (MONDO:0100318)" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3255 label: relabel 'parasitic infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3256 label: revise label and def for latent viral infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3257 label: relabel 'SARS-CoV-2-related disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3258 label: release_2021-07-12 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3259 label: post-COVID-19 disorder (MONDO:0100320) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/326 label: Translation of HPO Medical Terms 10-24 (158to300) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3260 label: update release notes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3261 label: add instructions to remove old elk reasoner - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3262 label: revise label for disease arising from reactivation of latent virus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3263 label: rename post-COVID-19 disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3264 label: Review 'polycystic liver disease' DBxref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3265 label: Review 'paroxysmal nonkinesigenic dyskinesia 1' DBxref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3266 label: Review MONDO:0008345 "idiopathic pulmonary fibrosis" DBxref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3267 label: Update dd-github-conflicts.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3268 label: rename Rafiq syndrome MONDO:0013624 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3269 label: Simply count all properties used in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/327 label: Request to collapse two RERE gene disease IDs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3270 label: "added Orphanet:2924 to MONDO:0000447 and updated DBxref for this term\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3271 label: "updated the definition of 'disease arising from reactivation of laten\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3272 label: riboflavin deficiency OMIM:615026 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3273 label: Update dd-github-conflicts.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3274 label: added Orphanet:540 to parent term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3275 label: Renamed myofibromatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3276 label: 'subclass: diabetic polyneuropathy is not a child of diabetic nephropathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3277 label: '[Merge] type 1 and type 2 diabetes nephropathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3278 label: '''diabetic nephropathy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3279 label: rename 'diabetic kidney disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/328 label: Hypervalinemia and hyperleucine-isoleucinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3280 label: remove parent from 'diabetic polyneuropathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3281 label: add harrison subset tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3282 label: New renal classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3283 label: rename terms to remove (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3284 label: update change log notes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3285 label: Create generate-token.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3286 label: '[Merge] MONDO_0006448 ''testicular teratoma (disease)''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3287 label: Update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3288 label: Update generate-token.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3289 label: add idiopathic logical axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/329 label: Issue 327 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3290 label: add source to MONDO_0014860 'polycystic liver disease 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3291 label: reclassify familial visceral myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3292 label: relabel OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3293 label: '[NTR/gene] Ectodermal dysplasia WNT10A related' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3294 label: split megacystis-microcolon-intestinal hypoperistalsis syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3295 label: Rename OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3296 label: exclude superclass for 'ABCD1 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3297 label: add syn to 'd-bifunctional protein deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3298 label: revise annotations on 'primary hyperoxaluria type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3299 label: add syn and clingen xref to 'disorder of bile acid aminotransferase' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/33 label: Proposed minor and label definition change for colorectal cancer - id: https://api.github.com/repos/monarch-initiative/mondo/issues/330 label: 'added new term: Hypervalinemia and hyperleucine-isoleucinemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3300 label: add source to 'bile acid CoA:amino acid N-acyltransferase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3301 label: obsolete Heimler syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3302 label: '''obsolete neonatal adrenoleukodystrophy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3303 label: 'add new terms: ''classic or non-classic genetic disease presentation''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3304 label: add clingen preferred tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3305 label: add subclassOf axioms to peroxisome biogenesis subtypes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3306 label: 'Questions re: Peroxisome Biogenesis Disorders reclassification' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3307 label: rhizomelic chondrodysplasia punctata type 4 - add as synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3308 label: "rename children of 'encephalopathy due to mitochondrial and peroxisom\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3309 label: exclude subclasses from peroxisome biogenesis disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/331 label: pre-release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3310 label: "exclude subclasses from 'disorder of peroxisomal alpha-, beta- and om\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3311 label: fix typo in dbxref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3312 label: add clingen preferred tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3313 label: remove github link from source annotation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3314 label: rename MONDO:0018544 adrenoleukodystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3315 label: add def to 'disorder of peroxisomal transporter' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3316 label: '[Obsolete] MONDO_0017753 ''disorder of peroxisomal alpha-, beta- and omega-oxidation''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3317 label: exclude superclass from D-glyceric aciduria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3318 label: obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3319 label: relabel OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/332 label: developmental and epileptic encephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3320 label: "add new term alveolar capillary dysplasia without misalignment of pul\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3321 label: MONDO:0010061 possible obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3322 label: Added Harrison tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3323 label: "Obsolete DNA repair defect other than combined T-cell and B-cell immu\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3324 label: Add subClass Of axiom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3325 label: change term label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3326 label: remove SubClass of myositis, added Subclass of 'idiopathic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3327 label: add new class ectodermal dysplasia WNT10A related - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3328 label: seeing multiple annotations in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3329 label: added hgnc:8965 an subclass of - id: https://api.github.com/repos/monarch-initiative/mondo/issues/333 label: bad title for phenotype - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3330 label: Update import-terms-for-logical-axioms.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3331 label: Update import-terms-for-logical-axioms.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3332 label: autosomal recessive cutis laxa type 2, classic type parentage - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3333 label: autosomal recessive cutis laxa type 2, classic type (MONDO:0009054), superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3334 label: Adding ideopathic axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3335 label: Fixes multiple properties - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3336 label: Create robot-template.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3337 label: Merged Jervell-Lange Nielsen syndrome terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3338 label: Schaaf-Yang syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3339 label: merged MONDO:0019425 into MONDO:0010574 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/334 label: Language impairment & language disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3340 label: merge COG2-CDG into congenital disorder of glycosylation, type IIq - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3341 label: Merge Baratela-Scott syndrome into Desbuquois dysplasia 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3342 label: merge MONDO:0008820 to MONDO:0014243 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3343 label: set up new computer instructions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3344 label: various orphan edit - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3345 label: monochrom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3346 label: add logical def to cold sores - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3347 label: merge MONDO:0005263 into MONDO:0002009 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3348 label: '[NTR] children of ''herpes simplex infectious disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3349 label: merged MONDO:0015561 into MONDO:0020334 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/335 label: 'Suggest new term: infantile/childhood-onset epilepsy syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3350 label: New herpes terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3351 label: merged MONDO:0020329 into MONDO:0004604 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3352 label: merge MONDO:0020330 into MONDO:0004620 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3353 label: 'NTR: mosaic / complete modifiers' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3354 label: Add 'has modifier' some mosaic/complete axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3355 label: OBO ConformsTo has two instances of part_of? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3356 label: Fix xref and add new myopathy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3357 label: Revise subclass cadiac and ocular tuberculosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3358 label: '[Obsolete] MONDO:0008074' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3359 label: Update set-up-new-computer.md - fix image - id: https://api.github.com/repos/monarch-initiative/mondo/issues/336 label: new release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3360 label: MONDO:0004626 Hodgkin's paragranuloma [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3361 label: Updateing so import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3363 label: book syndrome characters - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3365 label: Removing bad source annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3366 label: Changes KEGG references to related - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3367 label: MONDO:0018965 Alport syndrome MONDO:0005334 hereditary nephritis both ExactMatch MeSH:D009394 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3368 label: '[NTR] Aneuploidy / trisomy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3369 label: 'axiomatize ''chromosome number anomaly'' terms : "aneuploidy" and "polyploidy"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/337 label: Addition or change of rare genetic diabetes mellitus to Monogenic diabetes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3370 label: Update import-terms-for-logical-axioms.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3371 label: revise synonym for 'disorder of peroxisomal beta oxidation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3372 label: "added Equivalent axiom to 'autosomal dominant cataract' and added sub\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3373 label: revisions to peroxisome biogenesis disorder terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3374 label: revise peroxisome biogenesis parent class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3375 label: 'created new disease characteristic: mosaic/complete' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3376 label: Question regarding status of adrenal gland hyperfunction MONDO:0006640 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3377 label: MONDO:0021133 acquired factor XIII deficiency move up one level [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3378 label: Revise macroglossia subclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3379 label: Excluded superclass congenital factor XIII deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/338 label: fixed typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3380 label: review subclasses of 'hereditary nonpolyposis colon cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3381 label: XPNPEP3 is part of a phenotypic series - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3382 label: '[NTR/gene] SEC61B-related polycystic liver disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3383 label: "Review parentage of adult refsum disease (MONDO:0009958) and added de\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3384 label: Merged MONDO:0008664 into MONDO:0006928 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3385 label: merged MONDO:0014315 into MONDO:0017400 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3386 label: merge MONDO:0014849 into MONDO:0012091 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3387 label: merge MONDO:0020328 into MONDO:0004633 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3388 label: Merged MONDO:0001948 into MONDO:0018992 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3389 label: MONDO:0019501 Usher Syndrome hierarchy/synonyms/exactmatch query for type 1 subtypes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/339 label: Eosinophilia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3390 label: MONDO:0007057 acroosteolysis dominant type remove ExactMatch obsolete MeSH C531695 add C537586 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3391 label: '[Merge] MONDO:0018226 infantile epileptic-dyskinetic encephalopathy with MONDO:0010632 developmental and epileptic encephalopathy, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3392 label: reclassify micropthalmia, Lenz type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3393 label: fetal alcohol spectrum disorder(s) MONDO:0021720 and MONDO:0000408 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3394 label: moved OMIM:615026 to ariboflavinosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3395 label: pachydermoperiostosis vs. primary hypertrophic osteoarthropathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3396 label: 'added axiom: ''has modifier'' some mosaic' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3397 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3398 label: Need a Mondo naming guide in the documentation or on website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3399 label: Add workshop details to Mondo website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/34 label: Consider changing mental retardation to intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/340 label: Issue 224 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3400 label: add superclass axiom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3401 label: "Broaden definition of \u2018disease arises from structure\u2019 (RO:0004030)" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3402 label: add table for synonym types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3403 label: Import and use SO to axiomize chomosome anomaly 'type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3404 label: 'documentation: move info about adding synonym types' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3405 label: rename add terms file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3406 label: need to make sure our contributors list is up to date - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3407 label: imported SO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3408 label: removed comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3409 label: added SO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/341 label: fixing typos for terms with e, with an accent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3410 label: neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB; 619121) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3411 label: MONDO:0021141 "acquired"[Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3412 label: 'split term: acrofrontofacionasal dysostosis MONDO:0008715' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3413 label: Difference between red cell aplasia and pure red-cell aplasia? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3414 label: '[Obsolete] ''chemically-induced disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3415 label: '[Revise subclass] ''radiation-induced disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3416 label: MONDO:0024293 polyposis, gastric, Dos Santos and de Magalhaes 1980 [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3417 label: ' MONDO:0018297 and MONDO:0014176 ? [Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3418 label: 'New terms: aneuploidy and trisomy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3419 label: Changed synonym type and added dbxref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/342 label: Fixed problematic axiom annotations causing incorrect OWL translation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3420 label: Add vanishing lung syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3421 label: release_2021-08-02 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3422 label: "excluded subclass for 'Timothy syndrome' and 'Jervell-Lange Nielsen s\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3423 label: "excluded subclass for 'Timothy syndrome' and 'Jervell-Lange Nielsen s\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3424 label: Update Changes.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3425 label: Update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3426 label: Create generate-report.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3427 label: Update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3428 label: obsolete Hodgkin's paragranuloma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3429 label: obsolete nerve growth factor, alpha subunit - id: https://api.github.com/repos/monarch-initiative/mondo/issues/343 label: review epilepsy branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3430 label: merge orthomyxoviridae infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3431 label: merge coxsackievirus infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3432 label: merge polyposis, gastric, Dos Santos and de Magalhaes 1980 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3433 label: merge hypotonia-speech impairment-severe cognitive delay syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3434 label: merge terms with psoriasis 14, pustular - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3435 label: merge testicular teratoma (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3436 label: Updated definition of "muscle-eye-brain disease" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3437 label: current MONDO release OWL is unparseable - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3438 label: Workshop update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3439 label: Fix source IRI. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/344 label: Obsolete term still in hierarchy (MONDO_0004589) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3440 label: release_2021-08-03 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3441 label: release_2021-08-03 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3442 label: '[Obsolete] MONDO_0100027 ''febrile seizures plus, genetic epilepsy with febrile seizures plus'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3443 label: add synonym to MONDO_0018214 'generalized epilepsy with febrile seizures plus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3444 label: QC check for permitted APs for reification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3445 label: add MONDO:equivalentObsolete to MESH:C531695to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3446 label: query superclass periodic paralysis with later-onset distal motor neuropathy (MONDO:0018343) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3447 label: '[Revise subclass] Stankiewicz-Isidor syndrome (MONDO:0054591)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3448 label: "[Revise subclass] \ttrimethylaminuria is_a metabolic disease" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3449 label: add synonym to 'Hao-Fountain syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/345 label: removed superclasses for obsoleted term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3450 label: Adding a check for APs used on axiom annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3451 label: Update generate-report.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3452 label: Include AML-NCIT terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3453 label: 'First draft: adding AML terms (NCIT)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3454 label: 'delete pattern: genetic.yaml' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3455 label: remove subset tag 'obsoletion candidate' on terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3456 label: '[Obsolete] terms marked as ''obsoletion candidates''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3457 label: add neonatal onset superclass of axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3458 label: create summary stats for Mondo for RPPR - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3459 label: Ontology Quality Control for RPPR - id: https://api.github.com/repos/monarch-initiative/mondo/issues/346 label: 'Obsolete term: asymptomatic dengue MONDO:0000259' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3460 label: Update robot-template.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3461 label: '[NTR] congenital right-sided heart lesions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3462 label: '[NTR] B Acute Lymphoblastic Leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3463 label: AML terms 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3464 label: obsoleted chemically-induced disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3465 label: 'Create the Harrison view ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3466 label: Request for statistics about Harrison View - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3467 label: exclude superclass of Guillain-Barre syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3468 label: exclude superclass from 'Guillain-Barre syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3469 label: Revise pattern to use 'variation instead of 'mutation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/347 label: ontologize the variables in these spreadsheets - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3470 label: Create new classes/hierarchy for 'pityriasis rubra pilaris' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3471 label: add AML terms for Deanne - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3472 label: need to align new AML terms with NCIt hierarchy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3473 label: disentangle germline vs somatic molecular abnormalities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3474 label: Availability of TSV/CSV version of this ontology - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3475 label: create monosomy pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3476 label: axiomatize 'monosomy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3477 label: 'obsolete: chromosome 8 deletion' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3478 label: added axioms for monosomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3479 label: axiomatize 'trisomy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/348 label: Xref fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3480 label: Create trisomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3481 label: Update monosomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3482 label: added axioms for trisomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3483 label: axiomatize 'tetrasomy' and 'pentasomy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3484 label: Create tetrasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3485 label: Create pentasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3486 label: '[Merge] tetrasomy X' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3487 label: '[Merge] pentasomy X' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3488 label: axiomized tetrasomy and pentasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3489 label: Update tetrasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/349 label: reinstated ''asymptomatic dengue' as a child of 'dengue disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3490 label: Update pentasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3491 label: Axiomatize "partial chromosomal duplication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3492 label: 'Axiomatize "partial chromosome duplication" ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3493 label: Update trisomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3494 label: Update tetrasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3495 label: Update pentasomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3496 label: Create partial_chromosome_duplication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3497 label: MONDO:0100096 COVID-19 when MONDO:equivalentObsolete xref but remains as ExactMatch? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3498 label: Exclude orphanet superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3499 label: exclude superclass from children of 'syndrome associated with dilated cardiomyopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/35 label: removed confidence annotation for MONDO_0011506 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/350 label: "Place \u2018proximal spinal muscular atrophy\u2019 under \u2018spinal muscular\ \ atrophy\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3500 label: revise orphanet xref on EDS2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3501 label: 'exclude superclass from children of ''syndrome associated with dilated cardiomyopathy'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3502 label: review children of syndrome or malformation associated with head and neck malformations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3503 label: "exclude subclassOf from children of 'syndrome or malformation associa\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3504 label: rename MONDO:0020113 primary acquired red cell aplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3505 label: MONDO:0010829 CARASIL syndrome incorrect ExactMatch DOID:13945. Possible subclass relationship revision needed MONDO:0007432 cerebral arteriopathy with subcortical infarcts and leukoencephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3506 label: Add AML clinical labels to AML terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3507 label: axiomatize "ring chromosome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3508 label: axiomize and review 'uniparental disomy' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3509 label: Need to sync w/ ordo 3.2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/351 label: Bloch-Sulzberger syndrome / incontinentia pigmenti achromians - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3510 label: created a new term, uniparental disomy and added axiom to children terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3511 label: release_2021-08-11 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3512 label: added axiom for ring chromosomes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3513 label: reviewed children of 'aneuploidy' and 'polyploidy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3514 label: 'Addresses #616' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3515 label: Update mondo-idranges.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3516 label: 'Fix issue #3382' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3517 label: Add single child exception for MONDO:0019864 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3518 label: Update Ray's mondo-idrange - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3519 label: created new sparql querries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/352 label: 'removed subclasses of obsoleted term (MONDO_0004589 ). Closes #344' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3520 label: 'typo: ''psoriatic arthritis, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3521 label: merge MONDO:0005261 into MONDO:0005258 (autism terms) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3522 label: "Merge 'familial glomangioma' (MONDO:0004424) into 'glomuvenous malfor\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3523 label: "merged MONDO:0005442 and MONDO:0005443 into MONDO:0005016 (diabetes n\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3524 label: 'Fixes issue #2863' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3525 label: split MONDO:0010168 Usher syndrome type 1 to ~type1 and ~type1B - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3526 label: split 'paroxysmal nonkinesigenic dyskinesia 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3527 label: merge 'fetal alcohol spectrum disorder' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3528 label: 'polycystic liver disease refinement required : MONDO:0000447 autosomal dominant polycystic liver disease and MONDO:0008265 Polycystic liver disease 1 obsolete ExactMatches and incorrect Exact Synonym' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3529 label: 'Added SEC61B-related polycystic liver disease per issue #3382' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/353 label: Issue 351 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3530 label: 'New Term Request: Focal segmental glomerulosclerosis and neurodevelopmental syndrome ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3531 label: 'Fixes issue #2578' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3532 label: MONDO:0020642 polycystic kidney disease add ExactMatch Mesh:D007690 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3533 label: 'Fixes issue #3520' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3534 label: OMIM and ORDO sync - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3535 label: deploy harrison views - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3536 label: "split \"Autosomal dominant epilepsy with auditory features\" to create \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3537 label: '[Merge] MONDO_0015750 ''amelogenesis imperfecta-gingival hyperplasia syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3538 label: Obsolete terms marked as 'obsoletion candidates' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3539 label: '[Merge] MONDO_0035354 ''IgG4-related systemic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/354 label: Ready to merge- Issue 337 - renamed MONDO_0015967 to monogenic diabetes closes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3540 label: '[Obsolete] ''TRIM22-related inflammatory bowel disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3541 label: '[Merge] MONDO_0035363 ''IRF2BPL-related regressive neurodevelopmental disorder-dystonia-seizures syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3542 label: '[Merge] MONDO:0035369 MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3543 label: '[Obsolete] MONDO:0035370 ALPI-related inflammatory bowel disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3544 label: 'Question re: new Orphanet class: MONDO_0035398 ''hypomyelination of early myelinating structures''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3545 label: add obs tag to 'amelogenesis imperfecta-gingival hyperplasia syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3546 label: 'Question re: oculocutaneous albinism type 8' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3547 label: QC check to check that we use dbxef instead of source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3548 label: add def and parent to 'Stankiewicz-Isidor syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3549 label: 'need SPARQL query for obsoletion candidates that includes seeAlso: GitHub link' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/355 label: publish mondo-base - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3550 label: remove obs candidate subset tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3551 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3552 label: Update disease_series_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3553 label: add seeAlso to obs candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3554 label: Update inborn_metabolic_disrupts.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3555 label: revise classification of trimethylaminuria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3556 label: add xref to 'idiopathic scoliosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3557 label: review classification of Hereditary Hemochromatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3558 label: add new xref for 'hereditary hemochromatosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3559 label: the duplicate source annotation is back - id: https://api.github.com/repos/monarch-initiative/mondo/issues/356 label: Logical incompatibilities between MONDO and HPO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3560 label: Stricter illegal property check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3561 label: add xref to 'oculocutaneous albinism type 8' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3562 label: revise def of inborn errors of metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3563 label: add dbxef to MONDO:0020642 polycystic kidney disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3564 label: udpate label and xrefs for alopecia universalis congenita - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3565 label: split acrofrontofacionasal dysostosis 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3566 label: "add synonym to MONDO_0018214 'generalized epilepsy with febrile seizu\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3567 label: "rename MONDO:0014175 mitochondrial DNA depletion syndrome 12B (cardio\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3568 label: 'question: drachtman weinblatt sitarz syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3569 label: edits to children of connective tissue disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/357 label: PRPS1 deficiency disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3570 label: '[Obsolete] ''connective tissue disease'', ''systemic or rheumatic disease'', ''genetic systemic or rheumatologic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3571 label: ' Rename ''rheumatologic disorder'' to rheumatic disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3572 label: relabel rheumatologic disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3573 label: '[Obsolete] ''qualitative or quantitative defects of collagen 6''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3574 label: '[Obsolete] MONDO_0019686 ''type 2 collagen-related bone disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3575 label: '[Obsolete] MONDO_0019687 ''type 11 collagen-related bone disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3576 label: '[Obsolete] MONDO_0005569 ''cartilage disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3577 label: add obs tag to 'cartilage disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3578 label: added MESH id for ush1b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3579 label: "remove superclasses from 'congenital adrenal hyperplasia due to 17-al\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/358 label: "Review classification of \u2018Huntington disease\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3580 label: merge congenital valvular dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3581 label: relabel MONDO:0014243 Schaaf-Yang syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3582 label: add NCIT equiv mappings to AML terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3583 label: '[Merge] new NCIt AML classes with existing Mondo AML classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3584 label: add obs tags to NCIt AML terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3585 label: 'WIP: obsolete connective tissue disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3586 label: make list of Mondo terms that EBI/Open targets - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3587 label: remove skos exact match for obsoleted terms at source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3588 label: revise mutation to variation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3589 label: change MONDO:DesignPattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/359 label: Correct placement of overlap/overlapping syndromes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3590 label: 'Friedreich ataxia: clarify whether this is a grouping or a specific class' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3591 label: Update sparql for obsoletioncandidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3592 label: updated examples - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3593 label: '[Obsolete] ''connective tissue cancer''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3594 label: '[Obsolete] ''connective tissue disease with eye involvement''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3595 label: relabel:'connective tissue disorder due to lysyl hydroxylase-3 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3596 label: '[Obsolete] ''systemic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3597 label: "[Revise subclass] 'Hern\xE1ndez-Aguirre Negrete syndrome'" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3598 label: Ito hypomelanosis/ Nevus of Ito[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3599 label: children of lymphadenitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/36 label: Question about MONDO_0011649 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/360 label: replaced superclass for 'Huntington disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3600 label: MONDO:0011947 HNP1 and hypertensive renal disease [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3601 label: '[Revise subclass] LAMA5-related multisystemic syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3602 label: '[Revise subclass] ''malignant atrophic papulosis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3603 label: '[Revise subclass] ''neonatal Marfan syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3604 label: kernicterus MONDO:0006819 and bilirubin encephalopathy MONDO:0018477[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3605 label: '[Revise subclass] ainhum' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3606 label: '[NTR] Add ''Mendelian connective tissue disorder'' grouping class?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3607 label: rename 'retinal ischemic syndrome-digestive tract small vessel hyalinosis-diffuse cerebral calcifications syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3608 label: '[Revise subclass] Orphanet:3096' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3609 label: '''rheumatic fever''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/361 label: Issue 332 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3610 label: '[Revise subclass] ''TAFRO syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3611 label: '[Revise subclass] ''tempi syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3612 label: '[Obsolete] systemic grouping classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3613 label: ' bile duct cysts MONDO:0011278 and choledochal cyst MONDO:0018805[Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3614 label: Usher syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3615 label: 'DO NOT MERGE: obsolete upper level classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3616 label: Create f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3617 label: Update f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3618 label: Create f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3619 label: Create f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/362 label: Issue 350 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3620 label: added see also - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3621 label: update obsoletion with comments sparql to concatenate 'See Also' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3622 label: "add obs tag to 'febrile seizures plus, genetic epilepsy with febrile \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3623 label: add obs tag to connective tissue cancer - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3624 label: "add synonyms to 'autosomal dominant medullary cystic kidney disease w\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3625 label: '''double nail for fifth toe'' and ''double fingernail of fifth finger'' typo in disease location' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3626 label: '[NTR] UMLS:C3276419 Usher Syndrome, Type 1D/F' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3627 label: release_2021-09-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3628 label: "updated typos for 'double fingernail of fifth finger' and 'double nai\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3629 label: revise subclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/363 label: Issue 334 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3630 label: Mondo release notes from yesterday are the same as last month - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3631 label: updated report-obsoletioncandidates-withcomment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3632 label: merge acute myeloid leukemia, NPM1 gene mutation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3633 label: ' X-linked spermatogenic failure 1 MONDO:0056795 child of Sertoli cell-only syndrome ?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3634 label: 'split term: antiphospholipid syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3635 label: Add to definition for n of 1 use cases. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3636 label: review old cases in OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3637 label: review cases in HPO OMIM omit file and consider obsoleting in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3638 label: Added how to run a query on the inferred view - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3639 label: 'Mondo ODK migration ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/364 label: "added new term: MONDO_0100059 'hypereosinophilia of undetermined sign\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3640 label: MONDO:0008284 polyposis of gastric fundus without polyposis coli - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3641 label: add obs candidate tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3642 label: Revise SPARQL query for Obsoletion candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3643 label: add obs tags to December obs candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3644 label: added obsoletion_candidate for MONDO:0011293 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3645 label: added 'obsoletion_candidate' to MONDO:0010301 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3646 label: add n-of-1 subset tag to LAMA5-related multisystemic syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3647 label: RASopathy should be a child of Mendelian disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3648 label: revise superclass for Rasopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3649 label: '[Merge] hyperinsulinemic hypoglycaemia and hyperinsulinemic hypoglycemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/365 label: 'proposed merge: MONDO:0044923 acute myeloid leukemia with mutated NPM1 and MONDO:0018437 acute myeloid leukemia with NPM1 somatic mutations' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3650 label: '[Revise subclass] Exstrophy-epispadias complex' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3651 label: added "vascular disease" as a parent of 'malignant atrophic papulosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3652 label: updated parent for 'tempi syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3653 label: added new parent for 'neonatal Marfan syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3654 label: updated label and parent for 'TAFRO syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3655 label: Update pattern matches 2021-09-06 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3656 label: updated sparql to add scheduledforobsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3657 label: ' MONDO:0019174 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3658 label: revised def, added syn, add comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3659 label: Can someone comment on these clinical grouping classes? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/366 label: 'proposed merge: MONDO:0044924 acute myeloid leukemia with mutated CEBPA and MONDO:0017894 acute myeloid leukemia with CEBPA somatic mutations' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3660 label: update logical def for 'Bardet-Biedl syndrome 14' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3661 label: '[Obsolete] Mondo meta-grouping classes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3662 label: add obs tags to grouping metaclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3663 label: pattern for ring-chromosome-anomaly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3664 label: axiomatize 'partial chromosomal deletion' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3665 label: revise xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3666 label: add Robot templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3667 label: minor edits - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3668 label: add new term MONDO:0100050 Usher syndrome, type 1D/F - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3669 label: '[NTR] Intraosseous Spindle Cell Rhabdomyosarcoma with TFCP2/NCOA2 Rearrangements' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/367 label: create tickets for merge candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3670 label: add new terms MONDO:0100055 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3671 label: "change source on xref for 'polyposis of gastric fundus without polypo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3672 label: add UMLS dbxref to 'Noonan syndrome 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3673 label: biliary tract neoplasm UMLS Xref [fix xref] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3674 label: revise def and gene for 'Friedreich ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3675 label: revise xref biliary tract neoplasm MONDO:0005304 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3676 label: exclude superclasses from 'tuberous sclerosis 1' and 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3677 label: Add monochrome to Makebuild - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3678 label: updated xref for CARASIL syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3679 label: Added new term "neurodevelopmental disorder" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/368 label: ' various' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3680 label: Add children terms for new "neurodevelopmental disorder" class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3681 label: add new terms 'congenital alveolar dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3682 label: add superclass to 'X-linked spermatogenic failure 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3683 label: Reactivate OMIM slurp with new omim.ttl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3684 label: OMIM import September 2021 (old pipeline) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3685 label: Juvenile polyposis syndrome[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3686 label: add OMIMPS to existing Mondo classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3687 label: brachymetapody anodontia hypotrichosis albinoidism [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3688 label: add obs tag to brachymetapody anodontia hypotrichosis albinoidism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3689 label: Add monochrome terms to Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/369 label: updated source to ORCID on MONDO_0100061 'PRPS1 deficiency disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3690 label: imported monochrom terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3691 label: MONDO:0004914 and MONDO:0007292 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3692 label: Lentigines and lentigo? [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3693 label: Bazex syndrome & Bazex-Dupre-Christol syndrome[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3694 label: Cyclosporiasis/ Cyclosporosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3695 label: revise defs for n-of-1 use cases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3696 label: add obs tag to lentigines - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3697 label: 'Merge: MONDO:0006702 & MONDO:0100007 @kanems' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3698 label: merge 'type 2 collagen-related bone disorder' and 'collagenopathy type 2 alpha 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3699 label: add obs tag to type 2 collagen-related bone disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/37 label: Question on MONDO_0011996 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/370 label: merge MONDO_0006073 'adenomatoid odontogenic tumor' with MONDO:0004230 'adenomatoid tumor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3700 label: MONDO:0022546 basal cell nevus anodontia abnormal bone mineralization[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3701 label: MONDO:0006674 and MONDO:0021041 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3702 label: revise hierarchy for 'palmoplantar keratosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3703 label: MONDO:0001517 & MONDO:0045031 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3704 label: add axiom annotation to 'neurofibromatosis type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3705 label: Revise synonyms for autosomal dominant polycystic liver disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3706 label: add obs tag to 'chronic inflammatory demyelinating polyneuropathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3707 label: 'add to GitHub actions: run reports for the things in the edit file before they are released' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3708 label: add obs tag to cyclosporosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3709 label: brachydactyly type B term issues/X-refs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/371 label: merge MONDO_0006073 'adenomatoid odontogenic tumor' with MONDO:0004230 'adenomatoid tumor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3710 label: MONDO:0003390 wrong UMLS CUI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3711 label: MONDO:0023031 and MONDO:0024455 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3712 label: '[NTR] retrograde cricopharyngeus dysfunction (R-CPD)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3713 label: revise xref for 'glycogen-rich clear cell breast carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3714 label: revise xrefs and classification of 'brachydactyly type B2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3715 label: reclassify child of Juvenile polyposis syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3716 label: add new term MONDO:0100099 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3717 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3718 label: add seeAlso to obs candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3719 label: '[Obsolete] Obsolete ''developmental disorder of mental health''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/372 label: merge MONDO_0016257 'adenosarcoma of the corpus uteri' with MONDO:0002878 'uterine corpus adenosarcoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3720 label: Add congenital right-sided heart lesions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3721 label: Add restrictive pulmonary disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3722 label: Add synonym NPHP-XPNPEP3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3723 label: Test KGCL for the use for changelog summaries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3724 label: Question about VISCERAL NEUROPATHY, FAMILIAL, 3, AUTOSOMAL DOMINANT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3725 label: relabel MONDO_0012317 'visceral neuropathy, familial, autosomal dominant' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3726 label: '[NTR] Bardet-Biedl syndrome 20' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3727 label: Add B Acute Lymphoblastic Leukemia term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3728 label: add obs tags to terms to be split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3729 label: Get rid of DC identifiers in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/373 label: merge MONDO_0019471 'adult T-cell leukemia/lymphoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3730 label: '[NTR] Zinner syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3731 label: add 4 children to 'hereditary connective tissue disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3732 label: rename hereditary disorder of connective tissue - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3733 label: add new term MONDO:0100109 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3734 label: revise subclassOf assertions for Legg-Calve-Perthes disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3735 label: 'Removing mentions of obsolete DC: namespace' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3736 label: "add new term MONDO:0100111 focal segmental glomerulosclerosis and neu\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3737 label: ROBOT template based obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3738 label: 'split term: autosomal dominant primary microcephaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3739 label: create late.md for late onset diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/374 label: merge MONDO_0007743 'attention deficit-hyperactivity disorder' with MONDO:0005302 'attention deficit hyperactivity disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3740 label: add onset axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3741 label: epithelioid hemangioendothelioma SNOMED code - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3742 label: add axioms for chromosomes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3743 label: release_2021-10-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3744 label: 'OMIM: Changed source URL' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3745 label: release_2021-10-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3746 label: revise xref for 'epithelioid hemangioendothelioma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3747 label: rename MONDO:0012892 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3748 label: reclassify 'familial cutaneous melanoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3749 label: add new term Bardet-Biedl syndrome 20 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/375 label: obsolete MONDO_0003119 'histiocytoid hemangioma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3750 label: 'Bugfix: `%_slurp` failing because no `src/ontology/tmp/` dir' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3751 label: 'Error: "make omim_slurp": "mirror/hp.obo at ../scripts/add-to-tbd.pl line 76"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3752 label: Add cross-references from HP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3753 label: merge amelogenesis imperfecta-gingival hyperplasia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3754 label: merge IgG4-related systemic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3755 label: "merge IRF2BPL-related regressive neurodevelopmental disorder-dystonia\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3756 label: "merge MTHFS-related developmental delay-microcephaly-short stature-ep\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3757 label: rename glaucoma 1, open angle, E - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3758 label: revise xref for 'giant axonal neuropathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3759 label: revise xrefs for 'FG syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/376 label: merge MONDO_0002510 'germ cell and embryonal cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3760 label: merge Bazex syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3761 label: update xref for 'congenital neuronal ceroid lipofuscinosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3762 label: fix source on 'autosomal recessive infantile hypercalcemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3763 label: added chr16p12.1 to Monochrom list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3764 label: add HP xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3765 label: updated some partial deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3766 label: revise subclasses of type 2 collagen-related bone disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3767 label: '[Revise subclass] ''autosomal dominant rhegmatogenous retinal detachment''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3768 label: "revise classification of 'autosomal dominant rhegmatogenous retinal d\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3769 label: revise synonym scope for 'upper limb mesomelic dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/377 label: merge MONDO_0006501 'inflammatory skin disease' with MONDO:0002406 dermatitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3770 label: Fix SKOS pipeline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3771 label: Adding HSAPDV import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3772 label: Show how it would look with fixed sublcasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3773 label: Create disease_has_major_feature.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3774 label: import onset terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3775 label: added partial chromosome deletion patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3776 label: '[Merge] ''hereditary late onset Parkinson disease'' and ''late-onset Parkinson disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3777 label: equiv between '2p21 microdeletion syndrome' and 3 other classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3778 label: 'WIP: add clingen preferred tags' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3779 label: various cancer edits - id: https://api.github.com/repos/monarch-initiative/mondo/issues/378 label: "merge MONDO_0001018 'lymphoblastic leukemia' with MONDO_0004967\tacute\ \ lymphoblastic leukemia (disease)" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3780 label: revise logical defs for digestive sys disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3781 label: exclude superclass from 'hypotonia-cystinuria syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3782 label: Merge MONDO:0016538 'hypotonia-cystinuria syndrome type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3783 label: exclude superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3784 label: need to create tickets for Chris' editor comments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3785 label: various mucopolysaccharidosis classification issues - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3786 label: Adding explain debug.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3787 label: '[Merge] MONDO:0019302' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3788 label: '[Obsolete] ''mucopolysaccharidoses, unclassified types''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3789 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/379 label: merge MONDO_0011326 'citrullinemia, type II, adult-onset' with MONDO_0016603 'citrullinemia type II' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3790 label: pneumonia icd-10 ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3791 label: relabel MONDO:0008233 pheochromocytoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3792 label: "add new grouping class: mucopolysaccharidosis or mucopolysaccharidosi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3793 label: "add grouping class: mucopolysaccharidosis or mucopolysaccharidosis-li\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3794 label: Create disease_or_disease_like.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3795 label: fix typo in def for 'SARS-CoV-2-related disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3796 label: Merged OMIM ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3797 label: MONDO:0007684 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3798 label: revise xref on pneumonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3799 label: MONDO:0009004 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/38 label: question about MONDO_0012172 mitochondrial trifunctional protein deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/380 label: merge MONDO_0006248 'hydatidiform mole' with MONDO:0018944 'gestational trophoblastic neoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3800 label: MONDO:0012356 glomerulocystic kidney disease with hyperuricemia and isosthenuria [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3801 label: MONDO:0008091 abnormal neutrophil chemotactic response [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3802 label: fix duplicates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3803 label: MONDO:0010527, microphthalmia-ankyloblepharon-intellectual disability syndrome [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3804 label: '[Merge] MONDO:0007815 immunodeficiency with defective leukocyte and lymphocyte function and with response to histamine-1 antagonist' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3805 label: MONDO:0008122 , olivopontocerebellar atrophy 5 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3806 label: Create NORM.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3807 label: MONDO:0011329, cerebral palsy, spastic quadriplegic, 1[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3808 label: MONDO:0013172 polymicrogyria with optic nerve hypoplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3809 label: Restructuring poisoning branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/381 label: obsolete MONDO_0008331 'pseudopapilledema (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3810 label: relabel 'lazy leukocyte syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3811 label: need to review editor comments and take action - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3812 label: make related synonyms exact synonyms when they match the primary label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3813 label: fix related synonyms where they match the label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3814 label: add clingen preferred tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3815 label: remove logical def from connective tissue disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3816 label: relabel periodic fever, immunodeficiency, and thrombocytopenia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3817 label: relabel visceral neuropathy, familial, 3, autosomal dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3818 label: revise xref for 'polymicrogyria with optic nerve hypoplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3819 label: OMIM update 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/382 label: merge MONDO_0000583 'immunoglobulin beta deficiency' with MONDO_0012987 'agammaglobulinemia 6, autosomal recessive' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3820 label: make stricter checks for equiv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3821 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3822 label: add obsoletion tags to Orphanet grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3823 label: exclude superclasses from ordo only is_a - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3824 label: exclude superclass for 'autosomal dominant osteosclerosis, Worth type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3825 label: exclude superclasses from ordo only is_a - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3826 label: exclude subclasses from ordo only is_a - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3827 label: exclude superclasses of microdeletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3828 label: chromosomal deletion terms should not be children of their features - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3829 label: WWOX epileptic encephalopathy synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/383 label: merge MONDO_0000581 'lambda 5 deficiency' with MONDO_0013287 'agammaglobulinemia 2, autosomal recessive' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3830 label: add synonyms to 'developmental and epileptic encephalopathy, 28' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3831 label: reclassify children under 'autosomal dominant primary microcephaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3832 label: revise defs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3833 label: Update disease_series_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3834 label: 'split term: MONDO:0010528 anosmia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3835 label: add parent to 'Alport syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3836 label: '[Obsolete] MONDO_0009535 ''lymphedema, congenital recessive''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3837 label: revise xrefs for 'hereditary lymphedema' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3838 label: MONDO:0019313 "hereditary lymphedema" Clean up - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3839 label: add new term occupational disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/384 label: 'remove comment from MONDO_0007930 ''Bernard-Soulier syndrome, type A2, autosomal dominant'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3840 label: merge Homocysteinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3841 label: 'Fix: Anonymous-33: Removed a no-longer informative line referencing an anonymized item' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3842 label: "exclude superclasses from pulmonary fibrosis and/or bone marrow failu\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3843 label: 'Fix: COHD xrefs: Removed all instances of in mondo-edit.obo' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3844 label: "add NCIt xref to o\tMONDO:0035121 myeloid/lymphoid neoplasm associated\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3845 label: '[Merge] MONDO_0000881 ''myeloid and lymphoid neoplasms with eosinophilia and abnormalities of PDGFRA, PDGFRB, and FGFR1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3846 label: Charcot-Marie-Tooth disease dominant intermediate A MONDO:0011675 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3847 label: MONDO:0006606 & MONDO:0018139 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3848 label: revise xref and classification of 'susceptibility to uveal melanoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3849 label: "revise xrefs for 'severe early-onset pulmonary alveolar proteinosis d\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/385 label: merge MONDO_0020536 'pigeon-breeder lung disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3850 label: revise xref for familial infantile bilateral striatal necrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3851 label: revise def of infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3852 label: '[Obsolete] discitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3853 label: add new terms infectious discitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3854 label: Bump mkdocs from 1.0.4 to 1.2.3 in /docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3855 label: proposal to more explicitly separate human and non-human diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3856 label: MONDO:0017608 & MONDO:0006543[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3857 label: fix annotations on terms to be split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3858 label: add new term port-wine nevi-mega cisterna magna-hydrocephalus syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/386 label: 'merge MONDO_0008040 ''transient myeloproliferative syndrome (disease)'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3863 label: revise superclasses for dermatomyositis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3868 label: '[Merge]''medullary cystic kidney disease 2''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3869 label: add xref to 'familial juvenile hyperuricemic nephropathy type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/387 label: merge MONDO_0022173 'chromosome 11q trisomy'? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3871 label: exclude superclasses from 'autosomal dominant osteopetrosis 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3875 label: 'WIP: revise hierarchy childhood absence epilepsy to match OMIMPS' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3876 label: revise hierarchy childhood absence epilepsy to match OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3877 label: Add owlaxiom check back - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3878 label: MONDO:0100240 inherited thrombophilia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3879 label: ' atrial septal defect, ostium primum type MONDO:0020437' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/388 label: merge MONDO_0003044 'extraosseous chondrosarcoma' with MONDO:0012825 'extraskeletal myxoid chondrosarcoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3880 label: 'MONDO:0006609 seborrheic infantile dermatitis ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3881 label: Update mk-skos.pl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3882 label: added "neurodevelopmental disorder" using ROBOT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3883 label: Added the ROBOT template for adding SubClass_Of - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3884 label: "Rename ROBOT_addSubClassOf_Mondo #3680.tsv to ROBOT_addSubClassOf_Mon\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3886 label: Orphanet grouping class clean up - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3887 label: Create qc-syn-equal-label.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3888 label: revise xref annotation for 'autism spectrum disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3889 label: update UMLS xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/389 label: merge MONDO_0003571 'labyrinthine dysfunction' with MONDO_0002467 inner ear disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3890 label: add parents to 'neuromyelitis optica' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3891 label: Sleep-related hypermotor epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3892 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3893 label: Laurenechan poisoning - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3894 label: add obsoletion tags to terms to be merged - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3895 label: add obsoletion tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3896 label: revise synonym scope for 'Alport syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3897 label: ' intrahepatic cholestasis OrphaNet ID' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3898 label: revisions to retina terms per Retina Gene Curation Expert Panel - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3899 label: BETA-THALASSEMIA, DOMINANT INCLUSION BODY TYPE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/39 label: removed xref to OMIM:101900 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/390 label: merge MONDO_0012026 'myotonia, potassium-aggravated' with MONDO_0018959 'potassium-aggravated myotonia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3900 label: add synonym to 'dominant beta-thalassemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3901 label: add new term intrahepatic cholestasis of pregnancy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3902 label: remove superclass from drug dependence - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3903 label: add synonyms to inherited thrombophilia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3904 label: 'split term: pulverulent cataract' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3905 label: "updated the xref and name for 'hereditary intrinsic factor deficiency\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3906 label: ' X-linked chondrodysplasia punctata 2 & chondrodysplasia punctata 2, X-linked dominant [Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3907 label: add synonym to familial thyroid dyshormonogenesis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3908 label: add synonyms and xrefs to atrial septal defect, ostium primum type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3909 label: Update release notes workflow - id: https://api.github.com/repos/monarch-initiative/mondo/issues/391 label: merge MONDO_0016023 'ocular coloboma'? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3910 label: updated classification of "thrombocytosis disease" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3911 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3912 label: 'added comment : variable = monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3913 label: 'added comment: variable = Monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3914 label: 'added comment: variable =Monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3915 label: 'added comment: variable=Monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3916 label: 'added comment: variable=Monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3917 label: 'Added comment: variable=Monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3918 label: 'added comment: variable=Monochrom term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3919 label: synpolydactyly same as Polysyndactyly ? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/392 label: merge MONDO_0018368 'primary peritoneal serous/papillary carcinoma' with MONDO:0003817 peritoneal serous papillary adenocarcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3920 label: Document the "changes" documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3921 label: release_20211101 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3922 label: Enable docs.yml GA workflow to push to protected master - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3923 label: 'Update the mondo_release_diff.md ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3924 label: updated assets and link to obsoletion candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3925 label: split WHIM syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3926 label: fix synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3927 label: split Martsolf syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3928 label: updated format - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3929 label: split term visceral neuropathy, familial, 1, autosomal recessive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/393 label: merge MONDO_0015118 'rare pulmonary disease' with MONDO_0020000 'rare respiratory disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3930 label: relabel spastic quadriplegic cerebral palsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3931 label: "obsolete glomerulocystic kidney disease with hyperuricemia and isosth\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3932 label: split WHIM syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3933 label: remove orphanet xref- the class does not exist - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3934 label: add new term glycogen storage disease IXa2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3935 label: relabel Charcot-Marie-Tooth Disease, axonal, type 2GG - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3936 label: relabel sleep-related hypermotor epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3937 label: split antiphospholipid syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3938 label: add replaced by - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3939 label: BAFopathy and its subtypes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/394 label: 'remove comment to merge on MONDO_0019293 ''skin vascular disease'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3940 label: cystic kidney disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3941 label: remove some diseases from "chromosomal anomaly" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3942 label: updated the classification to 'chromosomal anomaly' for 2 terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3943 label: Glanzmann thrombasthenia OrphaNet x-ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3944 label: add synonym to cystic kidney disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3945 label: MONDO:0015057 susceptibility to angioedema induced by ACE inhibitors [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3946 label: '[Merge] MONDO:0004058 pancreatic cholera' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3947 label: '[Merge] MONDO:0007089 Alzheimer disease 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3948 label: revise synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3949 label: '[Obsolete] Torg-Winchester syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/395 label: merge MONDO_0006719 'cystic lymphangioma' with MONDO_0009761 cystic hygroma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3950 label: update synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3951 label: revise synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3952 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3953 label: Remove floating classes from mondo.owl etc - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3954 label: OMIMPS:209850 and OMIM:209850 mapping? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3955 label: MONDO:0007821 [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3956 label: Revise synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3957 label: revise syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3958 label: '[Revise subclass] Review classification of immune disorders' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3959 label: add parents to SCID classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/396 label: merge MONDO_0007929 'Epstein syndrome' with MONDO:0007954 May-Hegglin anomaly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3960 label: add parents to bone marrow disease children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3961 label: add new term recessive RPE65 retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3962 label: NCIT lynch syndrome xrefs are not correct - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3963 label: 'Pending ClinGen Feedback: Relabel colorectal cancer, hereditary nonpolyposis, type 2 - 8' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3964 label: merge dysostosis acral with facial and genital abnormalities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3965 label: remove equiv axiom and superclass axiom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3966 label: Adding all new and updated imports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3967 label: "rename 'chromosomal anomaly' to \u2018chromosomal disorder\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3968 label: update maxo import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3969 label: relabel 'chromosomal disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/397 label: merge MONDO_0018045 'Hoyeraal-Hreidarsson syndrome' with MONDO:0010584 'dyskeratosis congenita, X-linked' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3970 label: SO terms for "chromosome_variation" need review. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3971 label: '"chromosome_variation" term: update needed' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3972 label: add axioms to chemotherapy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3973 label: added placeholder 'chromosome anomaly' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3974 label: revise def and NCIT xref for 'Lynch syndrome 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3975 label: merge kernicterus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3976 label: merge brachymetapody anodontia hypotrichosis albinoidism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3977 label: '[Merge] MONDO_0009278 ''hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3978 label: merge type 2 collagen-related bone disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3979 label: Update realized_in_response_to_environmental_exposure.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/398 label: merge MONDO_0024889 'benign mesonephroma' with MONDO_0002364 Wolffian duct adenoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3980 label: add new MAxO term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3981 label: obsolete 'treatment for disease' and 'has treatment by surgery' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3982 label: add new terms iatrogenic or spontaneous - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3983 label: add axioms to 'therapy-related myeloid neoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3984 label: review MONDO:0011847 and concept of 'migraine without aura' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3985 label: 'MONDO:0032600: capitalization for eponymous disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3986 label: fix capitalization of Snijders Blok-Campeau syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3987 label: added a comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3988 label: merge cyclosporosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3989 label: obsolete systemic grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/399 label: merge MONDO_0022263 'congenital hepatic fibrosis' with MONDO:0018840 'isolated congenital hepatic fibrosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3990 label: obsolete meta-grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3991 label: SCTID on COACH syndrome 1 MONDO:0008996 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3992 label: merge desmoplastic medulloblastoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3993 label: create a page in the document website with report sparql queries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3994 label: merge HNP1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3995 label: revise xrefs for COACH syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3996 label: obsolete cartilage disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3997 label: axiomatize "partial chromosomal duplication" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3998 label: add new term progressive bulbar palsy of childhood - id: https://api.github.com/repos/monarch-initiative/mondo/issues/3999 label: obsolete biological anomaly without phenotypic characterization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4 label: test new version in OLS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/40 label: "removed synonyms/cross references to OMIM:250100 Metachromatic Leukod\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/400 label: merge MONDO_0000184 'congenital vitamin K-dependent coagulation factors combined deficiency' with MONDO_0015722 'congenital vitamin K-dependent coagulation factors deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4000 label: '[NTR] hepatic fibrosis (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4001 label: Revert "axiomatize "partial chromosomal duplication"" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4002 label: add equiv axioms to chr. dup terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4003 label: add parents and subclassOf axioms to partial duplication terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4004 label: added seeAlso for chr. deletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4005 label: 'Chr partial deletion: add source to axioms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4006 label: added axioms for microduplication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4007 label: 'split term: chromosome 19q13.11 deletion syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4008 label: 'split term: Schwartz-Jampel syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4009 label: split testicular regression syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/401 label: remove comment from MONDO_0005597 'cystic renal cell carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4010 label: revise xrefs for osteoarthritis susceptibility - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4011 label: Update uberon_import.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4012 label: merge bulimia nervosa, susceptibility to, 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4013 label: OMIM:104300 preferred name from OMIM is ALZHEIMER DISEASE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4014 label: add synonym to amnionitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4015 label: 'OMIM: 189800, included name is used rather than preferred' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4016 label: OMIM:606690 (lung) lymphangioleiomyomatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4017 label: revise hierarchy for ichthyosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4018 label: Update isolated.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4019 label: '[NTR] ACTB-associated syndromic thrombocytopenia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/402 label: merge MONDO_0000386 'digestive system neuroendocrine tumor, grade 1/2' with MONDO_0015078 gastroenteropancreatic neuroendocrine neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4020 label: Remove pro from imports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4021 label: '[NTR/FNIP1]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4022 label: Create iatrogenic.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4023 label: add new term fibrotic liver disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4024 label: obsolete connective tissue cancer - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4025 label: ' Ehlers-Danlos syndrome, progeroid type 1 MONDO:0020682' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4026 label: add new term migraine without aura - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4027 label: add new term MONDO:0100432 FNIP1-associated syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4028 label: add term MONDO:0100433 ACTB-associated syndromic thrombocytopenia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4029 label: MONDO:0007458 digitotalar dysmorphism; ulnar drift, hereditary - id: https://api.github.com/repos/monarch-initiative/mondo/issues/403 label: merge MONDO_0002840 'eosinophilic gastritis' with MONDO_0016129 'eosinophilic gastroenteritis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4030 label: Create pregnancy.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4032 label: add axiom to ovarian adenoma benign - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4033 label: add obs.tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4034 label: reclassify rheumatic fever - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4035 label: add term ACTB-associated syndromic thrombocytopenia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4036 label: split benign paroxysmal positional nystagmus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4037 label: remove random monochrome class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4038 label: Create polygenic_disorder.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4039 label: '? split term: peripheral primitive neuroectodermal tumor ?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/404 label: merge MONDO_0024267 'epidemic encephalitis' with MONDO_0019384 'encephalitis lethargica' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4040 label: add obs tags to obsoletion candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4041 label: revise xrefs for 'seborrheic infantile dermatitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4042 label: split/bud cataract 2, multiple types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4043 label: add obs tag to 'peripheral primitive neuroectodermal tumor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4044 label: bud/split Schwartz-Jampel syndrome type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4045 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4046 label: revise xref on 'arthrogryposis, distal, type 1A' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4047 label: add term recessive GUCY2D retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4048 label: Add new retinopathy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4049 label: ADD TERM recessive GUCY2D retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/405 label: merge MONDO_0023097 'exostoses anetodermia brachydactyly type E' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4050 label: Redundancy or mis-matched X-refs on membranoproliferative glomerulonephritis and primary membranoproliferative glomerulonephritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4051 label: non-syndromic syndactyly/syndactyly X-refs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4052 label: obsolete benign fibrous mesothelioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4053 label: Fixing OMIMPS xrefs in mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4054 label: Mondo Xref Spring clean - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4055 label: MONDO:0008698 achalasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4056 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4057 label: Obsolete Neonatal epileptic encephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4058 label: 'New Term: Neonatal-onset developmental and epileptic encephalopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4059 label: 'New Term: Neonatal encephalopathy with nonepileptic myoclonus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/406 label: merge MONDO_0000024 'exostoses, multiple' with MONDO_0005508 'hereditary multiple osteochondromas' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4060 label: "remove comment from 'congenital hypothyroidism due to developmental a\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4061 label: add obs tag to neuroendocrine tumor with other location - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4062 label: remove comments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4063 label: add consider tag to 'inflammatory and autoimmune disease with epilepsy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4064 label: exclude superclasses from Bazex-Dupre-Christol syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4065 label: add obsoletion tags to orphanet grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4066 label: exclude superclass from 'nail-patella syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4067 label: add term neonatal-onset developmental and epileptic encephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4068 label: DIABETES INSIPIDUS, NEUROHYPOPHYSEAL TYPE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4069 label: 'add subclassOf to congenital diseases: ''has modifier'' some congenital' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/407 label: merge MONDO_0024462 'familial cutaneous melanoma' with MONDO_0005012 'cutaneous melanoma (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4070 label: 'question re: definition of Guillain-Barre syndrome, familial' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4071 label: obsolete chronic inflammatory demyelinating polyneuropathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4072 label: release_2021-12-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4073 label: MONDO:0011140 benign familial neonatal-infantile seizures [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4074 label: fix issues with release notes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4075 label: fix typo in Alice in Wonderland syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4076 label: revise xref for lymphangioleiomyomatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4077 label: relabel MONDO:0020682 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4078 label: create new term MONDO:0100457 achalasia, familial esophageal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4079 label: revise xref for syndactyly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/408 label: merge MONDO_0019625 'familial thoracic aortic aneurysm and aortic dissection' with OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4080 label: obsolete discitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4081 label: '''obsolete unclassified familial retinal dystrophy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4082 label: prototype chromosome type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4083 label: obsolete abnormal neutrophil chemotactic response - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4084 label: obsolete lymphedema, congenital recessive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4085 label: obsolete hypomyelination of early myelinating structures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4086 label: merge dystrophic epidermolysis bullosa - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4087 label: obsolete congenital neuronal ceroid lipofuscinosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4088 label: obsolete polyglucosan body myopathy type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4089 label: 'Updating release notes ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/409 label: merge MONDO_0003970 'gastric fundus carcinoma' with MONDO_0001058 gastric fundus cancer - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4090 label: 'split term: Acne MONDO:0011438' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4091 label: 'Relabel Term: Sex Differentiation Disease MONDO:0002145' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4092 label: MONDO:0019167 and MONDO:0006785 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4093 label: MONDO:0006251 and MONDO:0016039 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4094 label: statistic for Mondo slide - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4095 label: Confusion on nonepidermolytic palmoplantar keratoderma terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4096 label: Remove ENVO from ECTO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4097 label: merge pachydermoperiostosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4098 label: autoimmune lymphoproliferative syndrome type 3 ? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4099 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/41 label: "On MONDO_0008805 Takayasu's arteritis, removed synonyms and xrefs to \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/410 label: merge MONDO_0015136 'immunodeficiency due to a genetic complement cascade protein anomaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4100 label: merge late-onset Parkinson disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4101 label: merge mucopolysaccharidosis with skin involvement - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4102 label: merge hypotonia-cystinuria syndrome type 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4103 label: "merge immunodeficiency with defective leukocyte and lymphocyte functi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4104 label: MONDO:0016535 hypohidrotic ectodermal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4105 label: revise xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4106 label: add new term MECOM-associated syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4107 label: revise xrefs for primary membranoproliferative glomerulonephritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4108 label: merge Ketoadipicaciduria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4109 label: Question about "narrowMatch" properties disappearing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/411 label: merge MONDO_0001487 'intrahepatic bile duct cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4110 label: fix typo in 'myopathy caused by variation in POMGNT1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4111 label: Obsolete-some high-level grouping classes AND review children terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4112 label: Make 'psychiatric disorder' high-level term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4113 label: Make 'reproductive system disease' a high-level term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4114 label: add "congenital" axioms to 'congenital abnormality' children terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4115 label: review/reclassification "immunologic disease" (includes NTR, renaming,...) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4116 label: '[Obsolete] channelopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4117 label: '''Alice in Wonderland syndrome'' should be child of ''psychiatric disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4118 label: Cerebral visual impairment [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4119 label: add obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/412 label: merge MONDO_0018065 isolated trigonocephaly' with parent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4120 label: Pinpoint faulty mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4121 label: add new term MONDO:0100459 monogenic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4122 label: revise def of 'Guillain-Barre syndrome, familial' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4123 label: revise xrefs for 'primary Fanconi syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4124 label: "revise xref for 'frontotemporal dementia and/or amyotrophic lateral s\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4125 label: Adding narrow/broad/close matches back - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4126 label: '[NTR] monogenic and polygenic' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4127 label: relabel 'monogenic obesity' to 'Inherited obesity' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4128 label: deep (seated) dermatophytosis [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4129 label: revise synonym of nevus of Ito - id: https://api.github.com/repos/monarch-initiative/mondo/issues/413 label: merge MONDO_0016156 'qualitative or quantitative defects of FKRP' with MONDO_0016157 'qualitative or quantitative defects of fukutin' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4130 label: Holmes Gang syndrome MONDO:0019774[Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4131 label: remove comment from congenital hypothalamic hamartoma syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4132 label: '[Obsolete] mutagen sensitivity' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4133 label: reclassify 'epilepsy, childhood absence, susceptibility to, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4134 label: '[NTR] active tuberculosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4135 label: '[NTR] extensively drug-resistant tuberculosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4136 label: '[NTR]totally drug-resistant tuberculosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4137 label: '[NTR]rifampicin-resistant TB' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4138 label: inactive tuberculosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4139 label: drug-resistant tuberculosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/414 label: merge MONDO_0018399 'rare disorder with female infertility due to a congenital hypogonadotropic hypogonadism' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4140 label: '[Revise text def]multidrug-resistant tuberculosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4141 label: 'tuberculous ascites ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4142 label: silicotuberculosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4143 label: Change of parent term for six existing MONDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4144 label: 'split term: acquired partial lipodystrophy MONDO:0012104' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4145 label: Update mondo-idranges.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4146 label: relabel MONDO_0014150 'childhood onset epileptic encephalopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4147 label: MONDO_0010918 EIG1 and EJM1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4148 label: short(-)rib(-)polydactyly syndrome type 3 and Verma-Naumoff names? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4149 label: '[Revise subclass] ''epilepsy, idiopathic generalized'' and ''juvenile myoclonic epilepsy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/415 label: merge MONDO_0019097 'rare hemorrhagic disorder due to a constitutional platelet anomaly' into parent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4150 label: OMIMPS:608808 no longer exists (??) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4151 label: merge granulomatous disease, chronic, autosomal dominant type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4152 label: merge combined inflammatory and immunologic defect - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4153 label: revise xref 'dextro-looped transposition of the great arteries' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4154 label: merge microphthalmia-ankyloblepharon-intellectual disability syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4155 label: "merge MONDO_0000881 'myeloid and lymphoid neoplasms with eosinophilia\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4156 label: merge olivopontocerebellar atrophy 5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4157 label: revise labels for deafness terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4158 label: '[NTR] reactive airway disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4159 label: '[NTR] vitamin D deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/416 label: merge MONDO_0016569 'rare lymphatic malformation' with MONDO_0002013 lymphangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4160 label: Add fast-obo validator - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4161 label: Update per OBO ontology training - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4162 label: remove obs tag from 'neurometabolic disorder due to serine deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4163 label: how to handle synonyms from Orphanet slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4164 label: (Cutaneous) Mastocytosis, OMIM X-ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4165 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4166 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4167 label: review mappings in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4168 label: removing reverse proxy merges - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4169 label: revise xref sources for Orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/417 label: merge MONDO_0000572 'recombinase activating gene 1 deficiency' into MONDO:0012359 'combined immunodeficiency due to partial RAG1 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4170 label: MONDO:0011141- "folate level in erythrocytes" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4171 label: check the GARD xrefs and synonyms on proteosome-associated autoinflammatory syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4172 label: Check GARD xref on osteochondritis dissecans - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4173 label: Fix UMLS duplicate xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4174 label: Please add hyphen to Koolen de Vries syndrome term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4175 label: Increasing the severity of the proxy merge test - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4176 label: revise xref for 'semantic dementia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4177 label: revise xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4178 label: 'Merge partial deletion terms (8 terms) ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4179 label: merged 12p deletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/418 label: 'merge MONDO_0018708 ''squamous cell carcinoma of the oral tongue'' with MONDO_0000500 ''tongue squamous cell carcinoma'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4180 label: merged 17p deletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4181 label: review Mondo relationships - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4182 label: change dazhi to joe for code owner for .py - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4183 label: Absence of xref in MONDO:0019313, lymphatic malformation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4184 label: merged 18q deletion + added 2 new more specific terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4185 label: merged 1q deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4186 label: merged 22q deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4187 label: merged 4p deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4188 label: merged 9p deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4189 label: merged 18p deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/419 label: merge MONDO_0040679 'urothelial carcinoma' with TC carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4190 label: '[Revise subclass] mitochondrial myopathy-cerebellar ataxia-pigmentary retinopathy syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4191 label: Deafness renamed to Hearing Loss - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4192 label: Toying with new migration pipeline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4193 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4194 label: merge autosomal recessive infantile hypercalcemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4195 label: "Merge after Jan release: merge hyperinsulinism due to short chai\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4196 label: 'SOP : dbxrefs of obsolete classes when merging' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4197 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4198 label: Add instructions on "debugging docs" to docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4199 label: 'congenital diseases: sparql + Robot to add subclass' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/42 label: Question about MONDO_0008840 ataxia telangiectasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/420 label: merge MONDO_0007324 chorea - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4200 label: MONDO:0007064, adenosine deaminase deficiency - review? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4201 label: MONDO:0001569 acoustic neuroma and MONDO:0016754 vestibular schwannoma[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4202 label: MONDO:0018750 class I glucose-6-phosphate dehydrogenase deficiency and OMIM 300908[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4203 label: Update Mondo pattern docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4204 label: merge xrefs on 'chromosome 4 short arm deletion' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4205 label: MONDO:0016050 thiamine-responsive encephalopathy [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4206 label: MONDO:0003127 embryoma[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4207 label: MONDO:0021421 and MONDO:0021533[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4208 label: add new terms monogenic and polygenic - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4209 label: MONDO:0013617 and MONDO:0013357 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/421 label: merge MONDO_0009730 nephrosialidosis with MONDO_0009738 sialidosis type 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4210 label: remove obs tag fro 'developmental disorder of mental health' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4211 label: remove comment from embryoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4212 label: split term butterfly-shaped pigment dystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4213 label: add superclass axiom to 'plasma cell myeloma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4214 label: revise syns and xref for PKU - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4215 label: revise synonyms for open-angle glaucoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4216 label: revise hierarchy for 'epilepsy, idiopathic generalized' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4217 label: relabel 'difference of sexual differentiation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4218 label: split/bud preeclampsia/eclampsia 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4219 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/422 label: merge MONDO_0004818 'benign neurilemmoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4220 label: ' MONDO:0034024 kyphoscoliotic Ehlers-Danlos syndrome [Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4221 label: MONDO:0012873 Ehlers-Danlos syndrome, spondylocheirodysplastic type[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4222 label: MONDO:0018115 Epidermal nevus syndrome(s) [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4223 label: Fuchs' heterochromic uveitis MONDO:0004771[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4224 label: MONDO:0032647 global developmental delay, lung cysts, overgrowth, and wilms tumor[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4225 label: MONDO:0005992 trichinosis & MONDO:0019444 Trichinellosis [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4226 label: OMIM:146500 mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4227 label: add new term MONDO:0100468 Batten-Turner congenital myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4228 label: Wilms tumor/nephroblastoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4229 label: renew discussion of beta-thalassemia HBB/LCRB, MONDO:0013517 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/423 label: merge MONDO_0004819 'indolent myeloma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4230 label: relabled MONDO:0008083 ceroid lipofuscinosis, neuronal, 4 (Kufs type) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4231 label: change xref on 'lung adenocarcinoma in situ' to relatedTo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4232 label: 'MONDO:0100244 paroxysmal nocturnal hemoglobinuria (vs. acquired form: MONDO:0100245)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4233 label: MONDO:0013868 porokeratosis 7, disseminated superficial actinic type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4234 label: relabel MONDO:0018355 SIM1-related Prader-Willi-like syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4235 label: relabel MONDO:0013868 porokeratosis 7, multiple types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4236 label: MONDO:0044354 Rosai-Dorfman disease and MONDO:0006412 sinus histiocytosis with massive lymphadenopathy [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4237 label: split/bud MONDO:0100469 anosmia, isolated congenital, X-linked - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4238 label: MONDO:0024377 circadian rhythm sleep disorder, delayed sleep phase type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4239 label: MONDO:0044684 and MONDO:0006042[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/424 label: merge MONDO_0016747 'primary melanoma of the central nervous system' with meningeal melanoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4240 label: release_2021-12-30 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4241 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4242 label: revise xef on osteochondritis dissecans - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4243 label: relabel MONDO:0012496 Koolen-de Vries syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4244 label: "reclassify children of MONDO:0034024, kyphoscoliotic Ehlers-Danlos sy\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4245 label: revise xref on multiple system atrophy 1, susceptibility to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4246 label: "updated the SCTID for MONDO:0024377 (circadian rhythm sleep disorder,\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4247 label: updated xref for paroxysmal nocturnal hemoglobinuria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4248 label: excluded subclass for MONDO:0001752 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4249 label: unexpected changes are introduced when editing the ontology - id: https://api.github.com/repos/monarch-initiative/mondo/issues/425 label: merge MONDO_0000844 'spondyloepimetaphyseal dysplasia' with MONDO:0016761 spondyloepiphyseal dysplasia and spondyloepimetaphyseal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4250 label: "updated synonyms and references for \"Wilms tumor\" and the more specif\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4251 label: MONDO:0022556 and MONDO:0022557 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4252 label: MONDO:0020347 and MONDO:0007691 [Merge? or fix x-ref?] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4253 label: '[NTR] vitamin D deficiency disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4254 label: remove annotations from 'mucopolysaccharidosis type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4255 label: add new term reactive airway disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4256 label: add new term vitamin D deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4257 label: created new term, added genes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4258 label: tagging xrefs for orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4259 label: MONDO:0006928 and MONDO:0100450 [Revise] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/426 label: merge MONDO_0010178 'vas deferens, congenital bilateral aplasia of' with MONDO:0018801 'congenital bilateral absence of vas deferens' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4260 label: fix dates for obsoletion candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4261 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4262 label: "revise labels and syns for 'Ehlers-Danlos syndrome, spondylodysplasti\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4263 label: obsolete immunoglobulin switch sequences - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4264 label: obsolete treatment for disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4265 label: relabel MONDO:0014150 developmental and epileptic encephalopathy 94 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4266 label: obsolete primary ciliary dyskinesia-retinitis pigmentosa syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4267 label: obsolete Torg-Winchester syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4268 label: obsolete neonatal epileptic encephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4269 label: review chromosomal partial deletion terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/427 label: merge MONDO_0000156 trigonocephaly with MONDO_0018065 isolated trigonocephaly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4270 label: merge chondrodysplasia punctata 2, X-linked dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4271 label: remove 'pancreatic cholera' from obs list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4272 label: Obsolete grouping terms in the Chromosomal disorder branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4273 label: '"thrombocytopenia-absent radius syndrome" should not be a "syndrome caused by partial chromosomal deletion"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4274 label: merge late-onset familial alzheimer disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4275 label: merge hyperinsulinemic hypoglycaemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4276 label: "excluded Subclassof (partial chr deletion) from \"thrombocytopenia-abs\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4277 label: MONDO:0011692, basal ganglia calcification, idiopathic, 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4278 label: 'merge chromosomal duplication terms ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4279 label: MONDO:0010799 aminoglycoside-induced hearing loss - id: https://api.github.com/repos/monarch-initiative/mondo/issues/428 label: merge MONDO_0007600 'primary Fanconi syndrome' with MONDO_0001083 'Fanconi syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4280 label: Add definition for "partial chromosomal duplication/deletion" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4281 label: refactor chromosomal anomalies based of chromosome types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4282 label: prototype chromosome type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4283 label: "rename and updated references for MONDO_0018216 '17q21.31 microdeleti\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4284 label: added exact synonym + updated xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4285 label: '[Merge] syndactyly type 2 into synpolydactyly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4286 label: MONDO:0005678 bovine respiratory disease complex [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4287 label: relabel 'inherited obesity' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4288 label: added definition and updated classifications - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4289 label: add new terms mild ichthyosis vulgaris and severe ichthyosis vulgaris - id: https://api.github.com/repos/monarch-initiative/mondo/issues/429 label: obsolete MONDO_0001012 breast fibroadenosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4290 label: added chromosome axioms to 'syndactyly type" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4291 label: MONDO:0015687 and MONDO:0006147[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4292 label: revisions to ichthyosis hierarchy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4293 label: '[Merge] MONDO_0007810 ''autosomal dominant ichthyosis vulgaris''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4294 label: Update Mondo pattern docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4295 label: remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4296 label: add obsoletion tags to terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4297 label: DOS-DP template for chromosomal_region_duplication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4298 label: "add xrefs to 'renin-angiotensin-aldosterone system-blocker-induced an\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4299 label: exclude superclass for 'benign familial neonatal-infantile seizures 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/43 label: "removed synonym on MONDO_0008101 familial supernumerary nipples to Po\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/430 label: merge MONDO_0009288 glycogen storage disease due to glucose-6-phosphatase deficiency type IB' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4300 label: move xref on 'cutaneous mastocytosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4301 label: revision of partial_chromosomal_duplication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4302 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4305 label: remove obs tag from 'peripheral primitive neuroectodermal tumor' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4306 label: 'split/new class: lipodystrophy, partial, acquired, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4307 label: test chromosome type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4308 label: chromosome type classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4309 label: Chromosome type DOS-DP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/431 label: merge MONDO_0022418 'alopecia immunodeficiency' with MONDO:0011132 'T-cell immunodeficiency, congenital alopecia, and nail dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4310 label: added definitions for chromosome type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4311 label: MONDO:0018883 Berardinelli-Seip congenital lipodystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4312 label: Create test-ring_chromosome_anomaly.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4313 label: chromosome type DOSDP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4314 label: review ring chromosome DOS-DP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4315 label: updated ring chromosome disorder label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4316 label: MONDO:0021179 proteostasis deficiencies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4317 label: revise xrefs for 'idiopathic inflammatory myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4318 label: added Down syndrome branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4319 label: reviewed trisomy 18 terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/432 label: merge MONDO_0009148 'Rosselli-Gulienetti syndrome' with MONDO_0007124 'ankyloblepharon-ectodermal defects-cleft lip/palate syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4320 label: chromosome 13 trisomy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4321 label: rename childhood epilepsy with centrotemporal spikes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4322 label: remove synonym from MONDO:0007691 Guillain-Barre syndrome, familial - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4323 label: MONDO:0017853 and MONDO:0004553 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4324 label: MONDO:0042908 and MONDO:0015325 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4325 label: relabel object property - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4326 label: 'chromosome 8 deletion: revision of the xref' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4327 label: Update monosomy.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4328 label: MONDO:0022926 and MONDO:0016350[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4329 label: 'chromosome 1, uniparental disomy 1q12 q21 : review term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/433 label: merge MONDO_0005094 hemangiopericytoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4330 label: review logical def for mediastinitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4331 label: 'chromosome 13q-mosaicism : review term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4332 label: 'chromosome 18 mosaic monosomy : term review' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4333 label: 'chromosome 22, monosome mosaic : term review' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4334 label: chromosomal disorder - term review - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4335 label: review terms to be added in "chromosomal disorder" branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4336 label: review some chromosomal disorder terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4337 label: '[Merge] 17q11.2 microduplication syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4338 label: axiomatize with Chromosome region ranges - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4339 label: add synonyms to allergic terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/434 label: merge MONDO_0016248 'familial ovarian cancer' with MONDO_0004033 'familial ovarian carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4340 label: MONDO:0022916 ? [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4341 label: Rename disease->disorder in labels for terms that conform to patterns/location.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4342 label: remove ORDO grouping classes as parents - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4343 label: reviewed typo in label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4344 label: MONDO:0020745 autosomal dominant cardiac arrhythmia (Kuhn) (rename) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4345 label: removed clingen preferred tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4346 label: prune away some of the annotations before the release that are not useful for users - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4347 label: add new annotation property preferred_external_id - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4348 label: revision of 'sex-cord gonadal tumor' branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4349 label: Map Orphanet's non-rare diseases to Mondo (list included) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/435 label: "merged MONDO_0012026 'myotonia, potassium-aggravated' with MONDO_0018\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4350 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4351 label: add 'preferred external ID' to proxy merge terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4352 label: add preferred external ID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4353 label: add MONDO:preferredExternal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4354 label: add MONDO:preferredExternal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4355 label: remove ordo grouping classes as parents - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4356 label: add MONDO:preferredExternal to entities table - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4357 label: 'PR for: prune away some of the annotations before the release that are not useful for users #4346' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4358 label: remove ordo grouping classes as parents - id: https://api.github.com/repos/monarch-initiative/mondo/issues/436 label: Issue 386 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4360 label: add new term MONDO:0100479 rifampicin-resistant tuberculosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4361 label: remove ordo grouping classes as parents - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4362 label: updated parent for 'palmoplantar keratoderma, Bothnian type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4363 label: reclassify susceptibility classes from OMIM Omit list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4364 label: MONDO:0020358 and MONDO:0007354 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4365 label: 'Review xref obsoleted at the source: DO ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4366 label: revise ORDO groupings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4367 label: Update poisoning.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4368 label: Update dependence_on_substance.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4369 label: updated axiom for DO obsoleted terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/437 label: 'NTR: Anaplastic (Malignant) Meningioma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4370 label: '[Merge] myofibrillar myopathy 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4371 label: review benign glioma (MONDO:0000638) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4372 label: revise ordo grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4373 label: reclassify ORDO subclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4374 label: '[Revise subclass] neurofibromatosis type 6' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4375 label: remove extra clingen preferrred annotation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4376 label: relabel MONDO:0007245 cafe au lait spots, multiple - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4377 label: Move Uberon to base - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4378 label: Fixes to ensure obsoletion schema - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4379 label: 'Documentation: add Mondo Changelog Metadata Schema' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/438 label: '''central diabetes insipidus'' subclass of ''rare neurologic disease''?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4380 label: "create Mondo Changelog Metadata Schema\_" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4381 label: create pipeline to regenerate terms from DOSDP patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4382 label: Adding obsolete tags for February release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4383 label: added obsolete tag for terms to merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4384 label: added obsolete tag for split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4385 label: Add new pattern merge pipeline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4386 label: Pattern merge pipeline trial run - poisoning.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4387 label: Metadata falsely including "|" (pipe) character - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4388 label: Review candidates for subclass relations based on lexical matches and append missing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4389 label: "Children\xB4s interstitial lung disease" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/439 label: Logical issues demonstrated by ELK 0.5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4390 label: '[Merge]MONDO:0022316 AND MONDO:0009316' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4391 label: Update SPARQL and Pattern docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4392 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4393 label: add synonyms to interstitial lung disease specific to childhood - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4394 label: add syn to 'Maffucci syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4395 label: reclassify ORDO subclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4396 label: '[Obsolete] corneoiridogoniodysgenesis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4397 label: '[Obsolete] goniodysgenesis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4398 label: '[Obsolete] MONDO:0016626 ''hemolytic anemia due to glyceraldehyde-3-phosphate dehydrogenase deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4399 label: merge Addison disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/44 label: Vetting of definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/440 label: adding additional stanza to prevent conflicts - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4400 label: Added chromosomal part ranges + axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4401 label: Issue 4349 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4402 label: Issue 4349b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4403 label: OMIM 256700 preferred name error - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4404 label: revise def and parent for tuberculous ascites - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4405 label: relabel MONDO:0011141 and add xref to MONDO:0011141 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4406 label: revise xrefs for Berardinelli-Seip congenital lipodystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4407 label: '[Obsolete] "congenital vitreoretinal dysplasia (MONDO:0020247)" and "vitreoretinal degeneration (MONDO:0020248)"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4408 label: revisions to retina terms per Retina Gene Curation Expert Panel - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4409 label: revise labels for retinopathy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/441 label: merge MONDO:0015156 typhus-group rickettsiosis with MONDO_0001246 typhus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4410 label: '[KCNH1 associated disorder/KCNH1]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4411 label: MONDO:0008942 cerebelloparenchymal disorder II [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4412 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4413 label: Update Mondo pattern docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4414 label: fix source annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4415 label: MONDO:0044784 and/or MONDO:0006086 [Revise text def] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4416 label: Simple mass obsoletion pipeline with SPARQL - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4417 label: MONDO:0056821 & MONDO:0015264 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4418 label: remove obs tag from 'TRIM22-related inflammatory bowel disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4419 label: revise syn for congenital hereditary endothelial dystrophy of cornea - id: https://api.github.com/repos/monarch-initiative/mondo/issues/442 label: Request to change main term of MONDO:0011652 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4420 label: MONDO:0005755 equine infectious anemia; non-human disease [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4421 label: exclude superclasses 'supranuclear palsy, progressive, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4422 label: MONDO:0007061 acylase, cobalt-activated [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4423 label: rename non-severe combined immunodeficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4424 label: MONDO:0011111 "horns in sheep" [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4425 label: metabolic syndrome (X) and abdominal obesity-metabolic syndrome concepts? [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4426 label: release_2022-02-04 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4427 label: MONDO:0014225 hemochromatosis type 5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4428 label: Change location of monarch dipper data - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4429 label: MONDO:0008042 myoclonus and ataxia[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/443 label: Consider Parasitic Rachipagus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4430 label: remove comment from 'pancreatic cholera' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4431 label: Making mass obsoletion pipeline a bit safer.. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4432 label: obsolete mutagen sensitivity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4433 label: add term KCNH1 associated disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4434 label: merge carcinoid tumors, intestina - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4435 label: merge overgrowth-macrocephaly-facial dysmorphism syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4436 label: add obs tag to pigmentation disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4437 label: revise xref on 'nonpapillary renal cell carcinoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4438 label: revise xref for 'Glanzmann thrombasthenia 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4439 label: revise xref on autism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/444 label: Microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4440 label: merge benign familial neonatal-infantile seizures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4441 label: add new term adult acne - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4442 label: merge Henoch-Schoenlein purpura - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4443 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4444 label: MONDO:0019511 & MONDO:0008073 familial juvenile hyperuricemic nephropathy type 1[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4445 label: 'split term: thyrotoxicosis MONDO:0010138' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4446 label: merge inclusion body fibromatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4447 label: merge vestibular schwannoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4448 label: merge embryoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4449 label: 'split term: amastia MONDO:0007238' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/445 label: Various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4450 label: MONDO:0021191[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4451 label: MONDO:0004684 MONDO:0016036 (Ledderhose and plantar fibromatosis) ? [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4452 label: Optic Atrophy-Intellectual Disability Syndrome Switch Related Synonym and Mondo Term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4453 label: MONDO:0023000 dobrow syndrome and MONDO:0017980 syngnathia multiple anomalies [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4454 label: added 'non-human disease' parent to 'bovine respiratory disease complex' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4455 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4456 label: merged MONDO:0018750 into MONDO:0010480 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4457 label: Update merging-and-obsoleting.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4458 label: merged MONDO:0018335 into MONDO:0021660 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4459 label: merged MONDO:0016050 into MONDO:0011841 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/446 label: Various2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4460 label: review 'toxic encephalopathy' (MONDO:0005527) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4461 label: reviewed xref for proteinopathy terms + New term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4462 label: map ICD10 groupings to Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4463 label: 'split term: hypertelorism, Teebi type MONDO:0007780 (& NTR for THS2)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4464 label: remove transitivity from 'disease has basis in feature' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4465 label: reviewed xref for the "Exstrophy-epispadias complex" branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4466 label: obsoleted 'Cerebral visual impairment' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4467 label: obsoleted 'pigmentation disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4468 label: MONDO:0018756 should not be high-level class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4469 label: MONDO:0044719 and MONDO:0018229 preferred and exact synonyms overlap - id: https://api.github.com/repos/monarch-initiative/mondo/issues/447 label: Additional EFO xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4470 label: added parent for 'euthyroid Graves orbitopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4471 label: obsolete ORDO grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4472 label: '[Merge] ''autosomal recessive Mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR1 deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4473 label: '[Revise subclass] MONDO_0007179 ''autoimmune disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4474 label: need clarification for obsoletion workflow - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4475 label: '[Obsolete] Antithrombin III deficiency MONDO:0013144' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4476 label: '[Obsolete] Antithrombin II deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4477 label: About the accuracy of ontology alignment in MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4478 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4479 label: 'Bug: broken link to OrphaNet/ORDO from "exactMatch" ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/448 label: 'NTR: Acute Flaccid Myelitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4480 label: obsolete 'pigmentation disease' (MONDO:0006600) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4481 label: jaundice terms reclassification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4482 label: fix curie - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4483 label: MONDO:0003280 Swayback [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4484 label: reading disorder has only 1 child- dyslexia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4485 label: check 'acquired polycythemia vera' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4486 label: remove gene from 'sudden cardiac arrest' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4487 label: MONDO:0020312 and MONDO:0004653[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4488 label: Regarding the use of MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4489 label: made 'Swayback' a 'sheep disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/449 label: V2018 10 26 rc - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4490 label: Update monarch rdf file location - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4491 label: move OMIM xref for AD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4492 label: review neuroblastoma, susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4493 label: "rename severe combined immunodeficiency, autosomal recessive, T cell-\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4494 label: add xrefs to 'butterfly-shaped pigment dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4495 label: exclude superclass from automimmune disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4496 label: 'split term: MONDO:0013626 psoriasis 14, pustular' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4497 label: 'split term: Add new OMIMPS terms (may need to split some existing prototype terms)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4498 label: OMIM slurp February 2022 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4499 label: '[Obsolete] MONDO_0015551 basal epidermolysis bullosa simplex' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/45 label: assign synonym scopes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/450 label: Various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4500 label: 'split term: MONDO:0007780 ''hypertelorism, Teebi type''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4501 label: 'split term: MONDO:0008852 ''congenital central hypoventilation syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4502 label: 'split term: MONDO:0009096 hereditary diffuse leukoencephalopathy with axonal spheroids and pigmented glia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4503 label: MONDO:0011319 activator of liver function 1 [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4504 label: MONDO:0014616 Skint1-like pseudogene [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4505 label: Some issues slipped through QC - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4506 label: OMIM slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4507 label: 'split term: MONDO:0011707 ''familial dyskinesia and facial myokymia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4508 label: 'split term: MONDO:0008345 ''idiopathic pulmonary fibrosis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4509 label: Tightening QC - id: https://api.github.com/repos/monarch-initiative/mondo/issues/451 label: relabeled MONDO:0011652 to Phelan McDermid syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4510 label: 'split term: MONDO:0100461 ''gastrointestinal defects and immunodeficiency syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4511 label: fix QC issues - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4512 label: relabel hereditary antithrombin deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4513 label: obsolete classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4514 label: add superclass for OMIM slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4515 label: exclude superclasses for susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4516 label: Merge MONDO:0008940 and MONDO:0013722[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4517 label: Update disease_series_by_gene_and_inheritance.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4518 label: Fix current obsolete Definitions. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4519 label: Updating mass obsoletion workflow to prepend OBSOLETE to definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/452 label: 'NTR: High Grade Malignant Neoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4520 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4521 label: scope of processing from OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4522 label: Missing SSSOM mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4523 label: Fix single stray ICD-10 code - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4524 label: 'Fix: Illegal ICD10 Codes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4525 label: Manually map 5 ORDO codes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4526 label: Updating matches - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4527 label: ' MONDO:0013907 bilateral generalized polymicrogyria' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4528 label: 'exact synonym: malnutrition' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4529 label: fix illegal ICD10 codes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/453 label: 'NTR: Malignant Spindle Cell Neoplasm' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4530 label: 'Fix mappings ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4532 label: review synonym type for 'malnutrition' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4533 label: MONDO:0011878 and MONDO:0007764 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4535 label: Ingest manually curated ICD10CM mappings into Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4536 label: Document curation rules for ICD10CM mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4537 label: MONDO:0015681/MONDO:0001726 childhood disintegrative disorder/disease ? [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4538 label: OMIM slurp 2 (11.02.2022) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4539 label: add new terms OMIM slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/454 label: add terms from NCIT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4540 label: Publish Mondo in draft release mode - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4541 label: '[NTR/gene] TPM4-related platelet disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4542 label: add obs tags- remove comments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4543 label: adding merge/obs tags - remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4544 label: add ICD10 grouping term mappings to Mondo terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4545 label: make sure there is documentation on the difference b/w proxy merge and reverse proxy merge - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4546 label: Adult refsum - update synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4547 label: add dbxref to 'adult Refsum disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4548 label: add xref to Adult refsum disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4549 label: '[NTR] CDH1-Related Diffuse Gastric and Lobular Breast Cancer, DGLBC' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/455 label: add synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4550 label: add source to xref on Adult Refsum disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4551 label: add ICD10 grouping term mappings to Mondo terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4552 label: add obs tags for terms to split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4553 label: add new obsolete Orphanet terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4554 label: add xref to adult refsum disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4555 label: add synonym to 'central nervous system disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4556 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4557 label: revise synonym scope for adult Refsum disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4558 label: synonym for adult Refsum disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4559 label: Authorship on Mondo community publication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/456 label: 'NTR: Pericytoma with t(7;12)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4560 label: updated adult Refsum disease synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4561 label: update xrefs for adult Refsum disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4562 label: updated definition for 'angiomyxoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4563 label: Update on Pattern and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4564 label: Automate pattern and qc docs in GH actions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4565 label: release_2022-03-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4566 label: updated label + added UMLS mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4567 label: updated label for BBSOAS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4568 label: Orphanet X-refs on Mondo ID but none are "Mondo:equivalentTo" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4569 label: release_2022-03-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/457 label: Issue 454 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4570 label: Create list of ICD terms excluded from our mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4571 label: Update Mondo pattern docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4572 label: Update QC GH Workflows - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4573 label: 'MONDO:0009958 - adult Refsum disease : update the x-ref' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4574 label: 'WIP: First round QC for cleaning source metadata' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4575 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4576 label: updated xref for 'adult Refsum disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4577 label: A draft list of exclusion reasons. This list will likely be extended as we consider more and more ontologies. This is here - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4578 label: "made \"neurofibromatosis with Noonan phenotype\"\" a child of 'neurofibr\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4579 label: Initial ORDO 4.0 syncronisation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/458 label: 'add synonym: UBTF-Related Disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4580 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4581 label: Retire OMIM:103470 and Orphanet:352740 on MONDO:0018138 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4582 label: obsoleted "chromosome 8 deletion" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4583 label: obsoleted chromosomal anomaly terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4584 label: '[Obsolete] ''pregnancy disorder with abortive outcome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4585 label: mappings with only relevant columns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4586 label: obsolete Antipyrine metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4587 label: merge syndactyly type 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4588 label: Create proxy-merge.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4589 label: Questions about MonDO source ontologies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/459 label: Revise classification under MONDO:0018891 'familial tumoral calcinosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4590 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4591 label: query for number of rare diseases in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4592 label: '[Revise subclass] MONDO:0004862 ''vitreous abscess'' should be a subclass of MONDO:0005227 ''abscess''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4593 label: '[NTR] ''liver abscess'' and ''intersphincteric abscess''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4594 label: Some ICD10 changes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4595 label: First round of big prefix cleanup - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4596 label: revise capitalization of clingen preferred AP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4597 label: Major prefix cleanup - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4598 label: Adding check for prefix usage with "source" and "hasDbXref" properties - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4599 label: revise source for OMIM xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/46 label: central sleep apnea - id: https://api.github.com/repos/monarch-initiative/mondo/issues/460 label: Request IDs for Tyrosine Hydroxylase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4600 label: Add gene-specific subtypes for mitochondrial diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4601 label: Remove ICD10EXP before release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4602 label: revise label for ClinGen preferred AP label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4603 label: merged chromosomal disorder terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4604 label: icd10cm, CSP2005 and NCI2004_11_17 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4605 label: Create exclusion-reasons.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4606 label: Updated Mondo mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4607 label: reviewed 'reading disorder' branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4608 label: split MONDO:0014253 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4609 label: merged paroxysmal nocturnal hemoglobinuria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/461 label: 'Proposal: Make MONDO root inherit from independent continuant' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4610 label: tenosynovial giant cell tumor, diffuse type and pigmented villonodular synovitis [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4611 label: merged Ichthyosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4612 label: merged MONDO:0011692 into MONDO:0024538 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4613 label: merged MONDO:0006588 into MONDO:0010962 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4614 label: Suggestions for new x-ref with SNOMED-CT and MedDRA - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4615 label: tyrosinemia of the newborn classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4616 label: MONDO:0008791 isolated anencephaly/exencephaly ? [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4617 label: revise OMIM source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4618 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4619 label: Obsolete high-level grouping class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/462 label: DO NOT MERGE First experiment in implementing disorder-as-ic - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4620 label: 'term reclassification : review' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4621 label: Obsoletion of grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4622 label: Added "psychatric disorder" parent to "Alice in Wonderland Syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4623 label: MONDO:0004983 'azoospermia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4624 label: '[Obsolete] blood protein disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4625 label: ICD10CM exact matches - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4626 label: MONDO:0021129 microphthalmia and PS600165 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4627 label: review children of 'blood protein disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4628 label: updated name to "inborn errors of immunity" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4629 label: MONDO:0005115 temporal lobe epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/463 label: 'added new term Pericytoma with t(7;12), closes #456' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4630 label: revise source annotations for OMIM xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4631 label: Is there a policy for treatment of records from OMIM using 'with or without'? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4632 label: MONDO:0005493 delayed encephalopathy after acute carbon monoxide poisoning [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4633 label: MONDO:0006832 and MONDO:0016358 [Merge or restructure?] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4634 label: revise syn capitalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4635 label: MONDO:0018017 and MONDO:0006089 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4636 label: MONDO:0004978 "aortic stenosis" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4637 label: MONDO:0005769 & MONDO:0017606[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4638 label: Identified 6 prefixes not recognized by Bioregistry - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4639 label: update source - clean up - id: https://api.github.com/repos/monarch-initiative/mondo/issues/464 label: Issue 455c - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4640 label: obsolete classes from HPO OMIM omit file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4641 label: add superclass to 'equine infectious anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4642 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4643 label: add new term 'TPM4-related platelet disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4644 label: obsolete classes from the HPO OMIT file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4645 label: add new term 'CDH1-related diffuse gastric and lobular breast cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4646 label: add subclasses of abscess - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4647 label: rename MONDO:0008791 anencephaly 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4648 label: '[Obsolete] MONDO_0015879 ''non-syndromic diaphragmatic or thoracic malformation'' and MONDO_0015880 ''syndromic diaphragmatic or thoracic malformation''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4649 label: All occurrences of ORDO renamed to orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/465 label: Issue 458 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4650 label: 'Replaces all ORDO: with Orphanet prefixes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4651 label: Ensure that ICD10 mappings are ICD10CM, not ICD10WHO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4652 label: obsolete classes from the HPO OMIT file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4653 label: split Graves disease, susceptibility to, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4654 label: "split term MONDO:0100490 breasts and/or nipples, aplasia or hypoplasi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4655 label: split MONDO:0100491 generalized pustular psoriasis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4656 label: revise xrefs for 'bilateral generalized polymicrogyria' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4657 label: updated typos and definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4658 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4659 label: large/giant congenital nevus MONDO:0023235 & MONDO:0044792[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/466 label: Issue 460 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4660 label: Aspiration and anaerobic pneumonias[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4661 label: revise superclass for 'anaerobic pneumonia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4662 label: Duplicate clause 'alt_id' error in Protege - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4663 label: rename MONDO_0011565 'abdominal obesity-metabolic syndrome 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4664 label: create new annotation property document - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4665 label: create a "Mondo clinical" version of Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4666 label: Missing OMIM reference to Geleophysic dysplasia 3 in MONDO:0000127 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4667 label: add xref to 'geleophysic dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/467 label: Issue 459 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4671 label: MONDO:0024472 (boutonneuse fever), remove Orphanet_101334 exactMatch-xref (African tick typhus) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4672 label: Check for all cryptic (hidden GCI) inborn vs acquired assumptions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4673 label: added 'tags' for Mondo Clinical view. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4674 label: add ICD10CM grouping class xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4675 label: 'disease to gene relation: distinguishing ''inherited'' versus ''acquired'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4676 label: remove alt IDs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4677 label: Is intellectual disability, XMEN-linked 88 a typo? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4678 label: merged MONDO:0100243;MONDO:0100245 into MONDO:0100244 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4679 label: updated obsoletion date - id: https://api.github.com/repos/monarch-initiative/mondo/issues/468 label: Classification of MONDO:0005391 'restless leg syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4681 label: Good source for lung disease classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4682 label: add synonyms from genemap2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4683 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4684 label: merge MONDO:0009412 scurvy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4685 label: added tags for June obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4686 label: '[NTR] Microcephaly 6 with or without short stature' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4687 label: add image to new annotation property documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4688 label: get rid of MONDO:superClassOf and MONDO:subClassOf axiom annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/469 label: 'Question: should obsoleted classes contain equivalence axioms?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4690 label: 'Replaces all ORDO: with Orphanet prefixes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4691 label: Glutaric acidemia IIA, B, C - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4692 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4693 label: release 220404 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4694 label: KIF1A associated neurological disorder (KAND) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4695 label: updated release document - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4696 label: created new patterns for infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4697 label: revise label for intellectual disability, X-linked 88 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4698 label: '[Obsolete] Obsolete out of scope terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4699 label: remove comments/editor notes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/47 label: Consider adding human taxon info for human diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/470 label: Object property has truncated label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4700 label: '[Merge] MONDO:0005982 tinea infection and ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4701 label: fix capitalization for MONDO:0023134 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4702 label: fix source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4703 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4704 label: obsolete terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4705 label: 'WIP: obsolete terms (2)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4706 label: remove superclassOf and subClassOf sources - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4707 label: exclude superclasses from term to be obsoleted - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4708 label: obsolete terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4709 label: created new 'abscess' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/471 label: Potter Sequence - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4710 label: 'clean-up contributors to term ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4711 label: "updated classification of ' delayed encephalopathy after acute carbon\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4712 label: merge tuberous sclerosis complex - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4713 label: merge hair defect-photosensitivity-intellectual disability syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4714 label: '[Revise subclass]MONDO:0020499' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4715 label: Update mappings.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4716 label: 'ready to merge: add new ORDO 4.0 terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4717 label: New organization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4718 label: added Equivalent to 'tinea infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4719 label: merged MONDO:0004771 into MONDO:0016989 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/472 label: 'WIP: various' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4720 label: Update mkdocs.yml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4721 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4722 label: reorganization of navigation bar - take 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4723 label: Merged MONDO:0032647 into MONDO:0018445 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4724 label: merged MONDO:0005992 into MONDO:0019444 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4725 label: updated source annotation on orphanet xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4726 label: merged MONDO:0044354 into MONDO:0006412 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4727 label: merged MONDO:0044684 into MONDO:0006042 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4728 label: Merged MONDO:0022556 into MONDO:0022557 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4729 label: Merged MONDO:0006147 into MONDO:0015687 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/473 label: Review Design Patterns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4730 label: merged MONDO:0004553 into MONDO:0017853 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4731 label: Merged MONDO:0020358 into MONDO:0007354 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4732 label: Merged MONDO:0042908 into MONDO:0015325 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4733 label: Merged MONDO:0022926 into MONDO:0016350 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4734 label: remove relatedTo and directSiblingOf - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4735 label: Fixing some references to OMIM and Orphanet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4736 label: add new ORDO terms for ORDO 4.0 sync - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4737 label: add Orphanet xrefs to existing Mondo terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4738 label: Updating all mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4739 label: Some more prefix cleaning - id: https://api.github.com/repos/monarch-initiative/mondo/issues/474 label: 'New term: CSGALNACT1 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4740 label: Update f-entities.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4742 label: add ordo xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4743 label: Make a QC check, there should not be a consider if there is a replaced by - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4744 label: considers with weird annotations should be removed and replaced by proper xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4745 label: 'ready to merge: add new ORDO terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4746 label: is Orphanet:595098 equiv to MONDO_0010979 'Timothy syndrome'? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4747 label: Changes NCBI:mim2gene_medline to MONDO:ncbi_mim2gene_medline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4748 label: Prefix cleanup and normalisation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4749 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/475 label: 'PIGQ-CDG ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4750 label: update ICD10CM to ICD10WHO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4751 label: Mondo mappings should be sorted to reduce diff - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4752 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4753 label: Create synching documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4754 label: add synching to nav bar - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4755 label: fix annotations for obsolete cystic hygroma lethal cleft palate - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4756 label: 'ready to merge: add new ORDO terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4757 label: added dosql query - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4758 label: Fixing orcids from http to https - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4759 label: IgG4-related hepatopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/476 label: new release candidate - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4760 label: merge cerebelloparenchymal disorder II - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4761 label: Second to last round of cleaning - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4762 label: Some simple cleanup stuff - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4763 label: merge bronchiolitis obliterans organizing pneumonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4764 label: merge myoclonus and ataxia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4765 label: "merge autosomal dominant medullary cystic kidney disease with hyperur\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4766 label: mondo.sssom.config updates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4767 label: 'Cerebral Palsy: revise branch' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4768 label: '''neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4769 label: MedGen conflicts in OMIM:Mondo mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/477 label: Apparent redundancy with HPO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4770 label: updated ICD10CM/WHO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4771 label: Remaining ICD10 to ICD10CM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4772 label: add new terms ORDO microdeletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4773 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4774 label: "add new term atypical hemolytic uremic syndrome with complement gene \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4775 label: changed label for MONDO:0019528 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4776 label: '[Obsolete] obsoleting ORDO IDs that are phenotypes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4777 label: add new ORDO phenotype terms as born obsolete - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4778 label: revise parent for MONDO:0035151 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4779 label: '[Obsolete] Obsoleting ORDO genetic diseases' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/478 label: SLC10A7 deficiency (SLC10A7-CDG) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4780 label: add ORDO phenotype terms as born obsolete - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4781 label: '[Obsolete] Obsoleting ORDO grouping classes (4.0 sync)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4782 label: add ORDO genetic diseases as born obsolete (ORDO 4.0) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4783 label: add ORDO grouping classes as born obsolete (ORDO 4.0) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4784 label: '[Obsolete] Obsoleting ORDO rare terms (4.0 sync)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4785 label: Need a LinkML enum for the exclusion reasons - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4786 label: add new ORDO terms as born obsolete - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4787 label: rename and add ORDO xref to aortic aneurysm, familial thoracic 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4788 label: '[NTR] triopia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4789 label: 'NTR: grouping class for Mendelian neurodevelopmental disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/479 label: SSR3-CDG - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4790 label: definition update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4791 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4792 label: MONDO:0010512, bain should be Bain - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4793 label: revise typo in intellectual disability, X-linked, syndromic, Bain type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4794 label: Make use of "MONDO:otherHierarchy" xref sources? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4795 label: 'new term: "microcephaly 6 with or without short stature"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4796 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4797 label: add new ORDO term vibratory angioedema - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4798 label: 'created new term: KIF1A neurological disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4799 label: obsoleted pigmentation term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/48 label: Spinocerebellar ataxia with axonal neuropathy type 2 (SCAN2) vs Ataxia-oculomotor apraxia type (AOA2) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/480 label: merge MONDO_0011910 'autosomal dominant limb-girdle muscular dystrophy type 1C' with MONDO_0019947 'rippling muscle disease 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4800 label: acquired/inherited relation with gene - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4801 label: add syndromic biliary atresia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4802 label: Create LICENSE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4803 label: Add Chung-Jansen Syndrome as Synonym for PHIP-related... - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4804 label: Add synonym to multiple congenital anomalies-hypotonia-seizures syndrome 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4805 label: "add synonym to 'multiple congenital anomalies-hypotonia-seizures synd\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4806 label: exclude superclass from aspiration pneumonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4807 label: change synonym for 'hypercalcemia, infantile' to exact - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4808 label: spinal muscular atrophy, type 1 MONDO:0009669 question on exactmatch synonym spinal muscular atrophies of childhood, which itself represents more than one subtype - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4809 label: 'split term: nicotine dependence MONDO:0008575' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/481 label: 'ready to merge: obsoleted MONDO_0011910. addresses #480' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4810 label: MONDO:0008340 congenital ptosis (1) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4811 label: merge malignant ependymoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4812 label: merge Ledderhose disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4813 label: merge dobrow syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4814 label: merge atypical chronic myeloid leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4815 label: merge endosteal sclerosis-cerebellar hypoplasia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4816 label: simple cleanup stuff - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4817 label: '[Merge] MONDO:0021849 alopecia macular degeneration growth retardation syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4818 label: '[Merge] Graves disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4819 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/482 label: Primary label in OLS is abbreviation (LFS3) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4820 label: update xrefs for MONDO:0005115 temporal lobe epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4821 label: add new xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4822 label: autosomal recessive limb-girdle muscular dystrophy type 2R1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4823 label: autosomal recessive limb-girdle muscular dystrophy type R18 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4824 label: '[Revise text def] autosomal recessive LGMD type 2Z (MONDO: 0014977)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4825 label: move OMIMPS xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4826 label: rename azoospermia to spermatogenic failure to match OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4827 label: finish simple clean up - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4828 label: add back obsoleted IDs that were removed - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4829 label: add back obsoleted IDs that were removed - id: https://api.github.com/repos/monarch-initiative/mondo/issues/483 label: IS2 . -- primary label is an acronym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4830 label: capitalization questions in this path - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4831 label: fix captializaton - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4832 label: excluded subclass for "psychiatric disorder" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4833 label: Timothy syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4834 label: Spastic Diplegia Cerebral Palsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4835 label: reinstate coxsackievirus infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4836 label: add term triopia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4837 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4838 label: add HP to Mondo mappings to sssom export - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4839 label: Add exclusion mechanism to qc-omimps-should-be-inherited.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/484 label: adolescent idiopathic scoliosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4840 label: add preferredExternal to 'isolated optic nerve hypoplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4841 label: split Teebi hypertelorism syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4842 label: updated typo in "excluded QC" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4843 label: add back missing terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4844 label: add missing terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4845 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4847 label: Update qc-omimps-should-be-inherited.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4848 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4849 label: Add ID range for Sarah Gehrke - id: https://api.github.com/repos/monarch-initiative/mondo/issues/485 label: idiopathic scoliosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4850 label: add new genes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4851 label: split Teebi hypertelorism syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4852 label: split congenital central hypoventilation syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4853 label: "split hereditary diffuse leukoencephalopathy with axonal spheroids an\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4854 label: split familial dyskinesia and facial myokymia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4855 label: split familial dyskinesia and facial myokymia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4856 label: split idiopathic pulmonary fibrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4857 label: split gastrointestinal defects and immunodeficiency syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4858 label: 'Adding new Feature: version diff report' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4859 label: Diabetic ketoacidosis has inappropriate parent term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/486 label: olecranon bursitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4860 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4861 label: obsoleted exact match MeSH ID for multifocal choroiditis MONDO:0023833 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4862 label: OMIM slurp April 2022 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4863 label: Omim slurp april2022 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4864 label: 'split term: OMIMPS terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4865 label: add obs tags for terms to be split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4866 label: Create version-diff-report.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4867 label: add citation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4868 label: "add equiv axiom to 'gastrointestinal defects and immunodeficiency syn\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4869 label: VAMAS6 AND MONDO:0008661 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/487 label: MONDO_0018866 'Aicardi-Goutieres syndrome' is incorrectly classified as a subclass of 'Moyamoya syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4870 label: update xref for 'multifocal choroiditis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4871 label: reclassify 'diabetic ketoacidosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4872 label: reclassify 'Nipah virus disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4873 label: relabel ptosis, hereditary congenital, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4874 label: relabel autosomal recessive limb-girdle muscular dystrophy type R18 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4875 label: autosomal recessive limb-girdle muscular dystrophy type 2Z - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4876 label: '[Revise subclass] [NTR] [Relabel term] TTN-related myopathy (MONDO:0100175)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4877 label: Create qc-negative-subclass-of.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4878 label: change weird consider annotations to xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4879 label: No replaced by where there is a consider - id: https://api.github.com/repos/monarch-initiative/mondo/issues/488 label: "MONDO_0010568 'Aicardi syndrome' does not belong under \u2018syndromic developmental\ \ defect of the eye\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4880 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4881 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4882 label: '[Revise subclass] Susceptibility terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4883 label: Remove outdated terminology related to FMR1 and Fragile X - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4884 label: replace gene in fragile x syndrome classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4885 label: '[NTR] Ascaris lumbricoides infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4886 label: Create qc-doublewhite.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4887 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4889 label: "[Merge] MONDO:0004033\tfamilial ovarian carcinoma" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/489 label: Could we have preferred labels for specific user groups? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4890 label: revise synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4891 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4892 label: '[Merge] IDDM1 and type 1 diabetes mellitus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4893 label: release_2022-05-02 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4894 label: '[Merge] MONDO:0013809 cerebellar ataxia, neuropathy, and vestibular areflexia syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4895 label: revise synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4896 label: '[Obsolete] MONDO:0004268 subareolar duct papillomatosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4897 label: "[Merge] MONDO:0016275\tadenocarcinoma of cervix uteri" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4898 label: '[Merge] MONDO:0016286 adenoid cystic carcinoma of the cervix uteri' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4899 label: "[Merge] MONDO:0044652\toptic atrophy-peripheral neuropathy-developmental\ \ delay syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/49 label: isolated vs syndromic incoherencies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/490 label: stage II endometrioid carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4900 label: revise synoyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4901 label: "[Merge] MONDO:0009997\tRoberts syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4902 label: revise synonym scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4903 label: revise syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4904 label: split nicotine dependence - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4905 label: '[NTR] methylmalonic aciduria and/or homocystinuria, cblD type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4906 label: "merge developmental delay, intellectual disability, obesity, and dysm\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4907 label: merge autosomal recessive limb-girdle muscular dystrophy type 2R - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4908 label: obsolete syndromic diaphragmatic or thoracic malformation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4909 label: obsolete ocular albinism with congenital sensorineural hearing loss - id: https://api.github.com/repos/monarch-initiative/mondo/issues/491 label: OFC - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4910 label: merge metabolic syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4911 label: add new term methylmalonic aciduria and/or homocystinuria, cblD type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4912 label: remove editor note - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4913 label: 'split term: (bud) Bonnevie-Ullrich syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4914 label: '[NTR] acquired iron metabolism disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4915 label: 'pattern: lesioned' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4916 label: Relabel MONDO:0009614 "vitamin B12-responsive methylmalonic acidemia type cblB" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4917 label: Relabel MONDO:0009613 "vitamin B12-responsive methylmalonic acidemia type cblA - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4918 label: EDS 6 vs VI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4919 label: reclassify 'epidermal nevus syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/492 label: Zlotogora-Ogur syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4920 label: Add QC check to determine if grouping class is classified differently from all its leaf nodes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4921 label: MONDO:0020718 congenital short bowel syndrome 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4922 label: "revise editor note for 'autosomal recessive complex spastic paraplegi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4923 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4924 label: revise syn scope for 'Wolman disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4925 label: "[Merge] MONDO:0100188\tcombined ApoA-I and ApoC-III deficiency" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4926 label: update synonym scope (synonym spring clean) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4927 label: "[Merge] MONDO:0044652\toptic atrophy-peripheral neuropathy-developmental\ \ delay syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4928 label: "[Merge] MONDO:0035635\tshort stature-skeletal dysplasia-retinal degeneration-intellectual\ \ disability-sensorineural hearing loss syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4929 label: revise syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/493 label: remove disease with feature, and we will just see those in the annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4930 label: Add new MESH xrefs (and remove some invalid ones) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4931 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4932 label: Upgrade HGNC URIs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4933 label: Missing breast cancer sub-types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4934 label: Refreshing CL import - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4935 label: minor edits - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4936 label: glaucoma 1, open angle, G - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4937 label: '[NTR] ClinGen Retina GCEP new terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4938 label: Complex Neurodevelopmental Disorder with or without Congenital Anomalies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4939 label: Split subtypes in OMIM into new Mondo terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/494 label: Create annotation structure for placement and ranking in UI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4940 label: Self-Limited Familial Neonatal Seizures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4941 label: EPHB4-Associated Vascular Malformation Spectrum [NTR/gene] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4942 label: revise syn - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4943 label: Create qc-multiple-xref-precision-types.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4944 label: reclassify 'essential hypertension, genetic' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4945 label: T-box 24 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4946 label: '[Move parentage] diverticulosis, small-intestinal' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4947 label: Protege shows false parentage - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4948 label: primary bone dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4949 label: difference of sexual differentiation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/495 label: Create 'cardinal feature' annotation to drive which polyhierarchies to assert - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4950 label: acute disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4951 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4952 label: need descriptions of source annotations for our documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4953 label: add definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4954 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4955 label: revise synonym scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4956 label: add new OMIM terms (OMIM slurp) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4957 label: Update QC to maximum strictness on synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4958 label: Create qc-duplicate-exact-synonym-no-abbrev.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4959 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/496 label: disease susceptibility - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4960 label: revise synonym scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4961 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4962 label: update obs date for 'ALPI-related inflammatory bowel disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4963 label: obsoleted 'blood protein disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4964 label: obsoleted chromosomal disorder grouping class - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4965 label: obsolete channelopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4966 label: MONDO:0009812 osteomalacia, sclerosing, with cerebral calcification and MONDO:0009821 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4967 label: '[Revise subclass] microcephaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4968 label: '[Obsolete] head disorder term + some children' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4969 label: obsolete grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/497 label: transmissible disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4970 label: New OMIM terms 26.05.2022 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4971 label: 'split term: new OMIMPS May 2022' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4972 label: add new OMIM terms (OMIM slurp) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4973 label: add obs tags to terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4974 label: '[Obsolete] carpal region disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4975 label: ORDO 4.0 synchronization, continued... - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4976 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4977 label: MONDO:0020336 autosomal dominant Emery-Dreifuss muscular dystrophy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4978 label: "revise syn scope for 'autosomal dominant Emery-Dreifuss muscular dyst\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4979 label: reclassify diverticulosis, small-intestinal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/498 label: Atlantic cod allergy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4980 label: 'new disease association HEATR3 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4981 label: merged MONDO:0019664 and MONDO:0013127 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4982 label: updated definition for MONDO:0014977 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4983 label: New glutaric acidemia terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4984 label: SMPD1 - acid sphingomyelinase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4985 label: Inherited metabolic disease classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4986 label: review x-ref for COACH syndrome 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4987 label: add parent to hydatidiform mole - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4988 label: revise classification of Cole-Carpenter syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4989 label: split terms (OMIMPS) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/499 label: bone fracture - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4990 label: release 220601 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4991 label: 'update the label and def of chromosom inversion (MONDO:0043678) ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4992 label: MONDO:0000618 xrefs (Her2-receptor negative breast cancer) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4993 label: Apparent mineralocorticoid excess (syndrome) MONDO:0006657 & MONDO:0009025 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4994 label: '[Revise text def] Dysostosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4995 label: " 'primary bone dysplasia' should be relabeled to \u2018skeletal dysplasia\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4996 label: relabel MONDO:0018230 'skeletal dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4997 label: revise def for dysostosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4998 label: updated definition for timothy syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/4999 label: Add new term ascaris lumbricoides infectious disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5 label: Validate low confidence IDs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/50 label: dystonia classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/500 label: chitty Hall Webb syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5000 label: MONDO:0022018 Borrone di Rocco Crovato syndrome & MONDO:0009579 Frank-Ter Haar syndrome[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5001 label: MONDO:0009011 and MONDO:0015167 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5002 label: add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5003 label: '[Revise subclass] aplastic anemia should not be a subclass of telomere syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5004 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5005 label: 'split term: newborn respiratory distress syndrome MONDO:0009971' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5006 label: un-obsolete grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5007 label: add new term acid sphingomyelinase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5008 label: merge appendix goblet cell carcinoid - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5009 label: merge facial nerve palsy due to herpes zoster infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/501 label: discitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5010 label: merge giant congenital nevus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5011 label: '[Revise subclass] autosomal dominant cerebellar ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5012 label: relabel MONDO:0009614 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5013 label: "add new term complex neurodevelopmental disorder with or without cong\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5014 label: "relabel MONDO:0020718 congenital short bowel syndrome, autosomal rece\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5015 label: revise synonym scope for 'Ehlers-Danlos syndrome, kyphoscoliotic type 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5016 label: add new terms (un-obsolete) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5017 label: Attach Mondo precise mappings sssom file to release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5019 label: updated chromosomal disorder definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/502 label: osteoporosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5020 label: add superclasses to skeletal dysplasia grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5021 label: '"spinal muscular atrophy of childhood" synonym scope' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5022 label: merged MONDO:0006832 into MONDO:0016358 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5023 label: obsolete genitourinary disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5024 label: '[Obsolete] autoimmune disorder of urogenital tract - MONDO:0000601' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5025 label: updated synonyms for IDDM1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5026 label: reclassify terms - skeletal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5027 label: add subclasses of osteopetrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5028 label: add 'abnormal mineralization disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5029 label: reclassify children of Disorders of amino acid metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/503 label: bone deterioration disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5030 label: update release.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5031 label: MONDO:0003998 "vaginal tubular adenoma" [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5032 label: revise xefs on 'type 1 diabetes mellitus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5033 label: review children of 'type 1 diabetes mellitus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5034 label: Issue 3136 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5035 label: Treacher-Collins syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5036 label: revise label Treacher Collins syndrome 4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5038 label: Use CURIE syntax for HGNC references - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5039 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/504 label: neoplasm of femur - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5040 label: Acquired factor VIII deficiency [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5042 label: reclassify children of 'type 1 diabetes mellitus' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5043 label: add new ORDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5044 label: MONDO:0009744 neuronal ceroid lipofuscinosis 1 fix OrphaXref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5045 label: '[Revise subclass] Ontology term: non-dystrophic myopathy (MONDO:0016110) descendants' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5046 label: '[Revise subclass] hereditary neoplastic syndrome (MONDO:0015356)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5047 label: updated aortic stenosis terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5048 label: '[Revise subclass] autosomal recessive cutis laxa type 2A (MONDO:0018163)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5049 label: merge Worth syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/505 label: olecranon bursitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5050 label: merge childhood disintegrative disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5051 label: merge pigmented villonodular synovitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5052 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5053 label: remove consider annotations on non-obsolete terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5054 label: '[Revise subclass] ''partial trisomy 21'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5055 label: check HPO OMIM omit list and consider obsoleting omitted terms from Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5056 label: reclassify 'kuru, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5057 label: revise relation for 'spondyloepimetaphyseal dysplasia, Bieganski type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5058 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5059 label: GASTROINTESTINAL DEFECTS AND IMMUNODEFICIENCY SYNDROME 2 [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/506 label: B-cell chronic lymphocytic leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5060 label: MONDO:0005173 actinic keratosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5061 label: MONDO:0019777 Carpenter-Waziri syndrome [Obsolete?/X-ref update?/restructure subclass?] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5062 label: 'CD4 deficiency: MONDO:0022620 and MONDO:0030981 [Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5063 label: merge pigmented villonodular synovitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5064 label: Fixing typos on FAQ page - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5065 label: updated x-ref for vitilligo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5066 label: remove unused annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5067 label: replace MONDO:ORDO-def - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5068 label: Remove subclassof - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5069 label: Fix WHO CM bug - id: https://api.github.com/repos/monarch-initiative/mondo/issues/507 label: 12q14 microdeletion syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5070 label: add new ORDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5071 label: add OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5072 label: add new ORDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5073 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5074 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5075 label: Relabel Sanfilippo syndrome subtypes with mucopolysaccharidosis Type 3 (A, B, C or D) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5076 label: new Breast carcinoma terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5077 label: Updated x-ref for 'neuronal ceroid lipofuscinosis 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5078 label: 'New term: EPHB4-associated vascular malformation spectrum' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5079 label: obsolete MONDO:0021849 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/508 label: Rename disease->disorder in labels for terms that conform to `patterns/location.yaml` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5080 label: split "MONDO:0009971" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5081 label: review parentage for "autosomal dominant cerebellar ataxia" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5082 label: reviewed x-ref for MONDO:0005173 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5083 label: 'ACOX1 dysregulation as synonym to "Mitchell syndrome" ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5084 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5085 label: '[Merge] MONDO:0022880 ''corticobasal degeneration''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5086 label: revise syn scope (synonym spring clean) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5087 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5088 label: synonym spring clean - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5089 label: 'split term: Bonnevie-Ullrich syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/509 label: cochlear disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5090 label: split Bonnevie-Ullrich syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5091 label: '[Obsolete] MONDO:0000218 ''preimplantation embryonic lethality''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5092 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5093 label: exclude superclass of aplastic anemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5094 label: Create lesioned.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5095 label: remove editor note from iron metabolism disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5096 label: add new retinopathy terms for clingen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5097 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5098 label: revise syn scope (synonym spring clean) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5099 label: revise syn scope (synonym spring clean) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/51 label: arthrogryposis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/510 label: bifid uvula - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5100 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5101 label: add lesioned term to Mondo from PATO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5102 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5103 label: Add obs tags 2022 06 25 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5104 label: add new retinopathy grouping classes for ClinGen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5105 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5106 label: '[Merge] MONDO:0020503 ''resistance to thyrotropin-releasing hormone syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5107 label: revise Orphanet xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5108 label: revise ordo xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5109 label: Down Syndrome collective ticket - id: https://api.github.com/repos/monarch-initiative/mondo/issues/511 label: connective tissue neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5110 label: 'add new terms: children of TTN-related myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5111 label: Exclude superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5112 label: remove editor note - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5113 label: remove editor note - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5114 label: review ORDO grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5115 label: add obs tags to ORDO grouping terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5116 label: Relabel "retinal dystrophy with or without extraocular anomalies" MONDO:0014955 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5117 label: '[Merge] MONDO:0008370 ''reticular dystrophy of retinal pigment epithelium''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5118 label: relabel MONDO:0014955 RCBTB1-related retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5119 label: reclassify autosomal recessive cutis laxa type 2, classic type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/512 label: dentin caries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5120 label: add def to MONDO:0030669 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5121 label: rename mucopolysaccharidosis type 3 subtypes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5122 label: add synonym to Mitchell syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5123 label: fix captalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5124 label: add superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5125 label: Neonatal-onset encephalopathy with rigidity and seizures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5126 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5127 label: release_2022-07-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5128 label: UROD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5129 label: spastic pseudosclerosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/513 label: Update issue_template.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5130 label: split terms for OMIM slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5131 label: merge ascorbic acid deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5132 label: obsolete subareolar duct papillomatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5133 label: merge familial ovarian carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5134 label: OMIMPS split terms July release- updated in OLS yet? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5135 label: remove syndromic intellectual disability as a obsoletion candidate - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5136 label: "'partial trisomy 21' should be renamed to \u2018partial segmental duplication\u2019\ \ " - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5137 label: add synonym to 'complete trisomy 21' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5138 label: merge cerebellar ataxia, neuropathy, and vestibular areflexia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5139 label: obsolete T-box 24 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/514 label: Remove MONDO:0022020 from main epilepsy branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5140 label: merge adenocarcinoma of cervix uteri - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5141 label: merge adenoid cystic carcinoma of the cervix uteri - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5142 label: relabel neonatal-onset encephalopathy with rigidity and seizures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5143 label: revise superclasses for ORDO only is_a supported classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5144 label: Add acute disease modifiers - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5145 label: '[Merge] MONDO:0004595 ''acute pulmonary heart disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5146 label: '[Merge] MONDO:0005410 ''acute graft vs. host disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5147 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5148 label: exclude superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5149 label: "relabel MONDO:0010663 'X-linked intellectual disability-hypotonic fac\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/515 label: systemic or rheumatic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5150 label: "exclude superclasses from children of 'syndromic intellectual disabil\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5151 label: add term UROD-related inherited porphyria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5152 label: revise def and add seeAlso for 'Batten-Turner congenital myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5153 label: merge optic atrophy-peripheral neuropathy-developmental delay syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5154 label: "merge short stature-skeletal dysplasia-retinal degeneration-intellect\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5155 label: merge osteomalacia, sclerosing, with cerebral calcification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5156 label: map DECIPHER IDs from HPOA to Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5157 label: add DECIPHER mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5158 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5159 label: relabel 'partial segmental duplication' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/516 label: Make new repo for reviewing disease-phenotype annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5160 label: IMD105 AND IMD104 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5161 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5162 label: fix typo in posterior urethral valve - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5163 label: remove comments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5164 label: obsolete terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5165 label: remove comments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5166 label: '[Merge] terms with editors note' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5167 label: "Add synonym to neurodevelopmental disorder with microcephaly, impaired language,\ \ epilepsy, and gait abnormalities, autosomal dominant\t" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5168 label: add synonym to OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5169 label: revise xrefs for MONDO:0008075 schwannomatosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/517 label: superimposed infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5170 label: reclassify children of organic aciduria - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5171 label: Pneumonia-Revisions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5172 label: Peroxisomal disease is caused by disruption of organelle (peroxisome) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5173 label: fix logical def for 'peroxisomal disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5174 label: Mondo is not updated on Bioportal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5175 label: Disease not present in Phenotype Profile Search tool - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5176 label: updated the command for installing Java - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5177 label: 'New AP: has_exclusion_reason' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5178 label: '[NTR/gene] DPH5-related diphthamide-deficiency syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5179 label: MONDO:0035682 & MONDO:0018919 [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/518 label: non-histaminic angioedema - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5180 label: Added translocation Down syndrome terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5181 label: Update mondo.obo version information - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5182 label: remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5183 label: remove comment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5184 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5185 label: obsoleted 'carpal region disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5186 label: Update mondo-edit.obo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5187 label: add annotation property has exclusion reason - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5188 label: '[NTR/gene] NTHL1-deficiency tumor predisposition syndrome ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5189 label: 'add term: NTHL1-deficiency tumor predisposition syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/519 label: neoplasm of aortic body - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5190 label: create new term DPH5-related diphthamide-deficiency syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5191 label: add gene to DPH5-related diphthamide-deficiency syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5192 label: 'MONDO:0018944: hidden equivalence' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5193 label: Add test for equivalence cycles with disjunctions (OR) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5194 label: COACH syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5195 label: review references for acquired hemophilia (parent and "A") - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5196 label: '[Obsolete] MONDO:0016784 ''gestational trophoblastic disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5197 label: remove logical def from 'gestational trophoblastic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5198 label: Add exclusion reason MONDO:excludeNonDisease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5199 label: 'New term: Behavioral terms needed for INCLUDE DCC' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/52 label: Create disjoint siblings for testing purposes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/520 label: Ehlers-Danlos syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5200 label: '[NTR] Cockayne spectrum with or without cerebrooculofacioskeletal (COFS) syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5201 label: '[NTR] food dermatitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5202 label: '[NTR] fungal infection of the toenail ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5203 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5204 label: Schmitt-Gillenwater-Kelly syndrome and Radial hypoplasia-triphalangeal thumbs-hypospadias-maxillary diastema syndrome[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5205 label: add new terms OMIM slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5206 label: revise ELK instructions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5207 label: Add new term MONDO:0100504 fungal infection of the toenail - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5208 label: add new term MONDO:0100505 food dermatitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5209 label: ICD10CM URI in `mondo.sssom.config` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/521 label: Legg-Calve-Perthes disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5210 label: '[NTR/gene] ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5211 label: Add obs tags to terms to be merged - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5212 label: "add def and new parent to segmental progressive overgrowth syndrome w\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5213 label: "revise parent for 'epilepsy, idiopathic generalized, susceptibility t\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5214 label: revise label for MONDO:0012163 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5215 label: reclassify 'fibrous dysplasia' and 'McCune-Albright syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5216 label: add new term MONDO:0100506 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5217 label: Update the "candidate for obsoletion" process. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5218 label: add new terms catatonia and disruptive behavior disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5219 label: Mirror Movements 1 and/or Agenesis of the Corpus Callosum - id: https://api.github.com/repos/monarch-initiative/mondo/issues/522 label: type 2 collagen-related bone disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5220 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5221 label: release 220801 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5222 label: add exclusion reason non disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5223 label: add synonym to 'postural orthostatic tachycardia syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5224 label: obsolete terms for Sept release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5225 label: obsolete ORDO grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5226 label: reclassify terms whose parent will be obsoleted - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5227 label: revise parents and defs for ORDO grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5228 label: Merged MONDO:0008370 into MONDO:0009979 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5229 label: Update SSSOM matches - id: https://api.github.com/repos/monarch-initiative/mondo/issues/523 label: Remove http://purl.obolibrary.org/obo/MONDO_0011892 (epilepsy label) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5230 label: create guide to view Mondo in Protege - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5231 label: Merged MONDO:0004978 into MONDO:0042981 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5232 label: Review a handful of new possible matches - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5233 label: obsolete MONDO:0000601 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5234 label: Obsolete "non-dystrophic myopathy" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5235 label: '[NTR] Anterior deviation infundibular septum' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5236 label: '[NTR] microdeletion syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5237 label: update synonyms for 'sleep apnea syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5238 label: Create qc-conforms-to-omimps.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5239 label: fix term replaced by - id: https://api.github.com/repos/monarch-initiative/mondo/issues/524 label: 'Cole-Carpenter syndrome ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5240 label: added exact synonyms for microdeletion/duplication - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5241 label: Endometriosis of uterus, rename to adenomyosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5242 label: add new terms anterior deviation infundibular septum - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5243 label: Decipher mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5244 label: MONDO:0013141 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5245 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5246 label: '[Merge] MONDO:0005410 ''acute graft vs. host disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5247 label: '[Merge] MONDO:0022880 ''corticobasal degeneration''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5248 label: "[Merge] MONDO:0020503 'resistance to thyrotropin-releasing hormone sy\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5249 label: MONDO:0006657 & MONDO:0009025 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/525 label: eye disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5250 label: "MONDO:0022018 Borrone di Rocco Crovato syndrome & MONDO:0009579 Frank\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5251 label: MONDO:0022620 and MONDO:0030981 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5252 label: Add canine part of NCIT + other non-human animal NCiT terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5253 label: '[NTR] Complex neurodevelopmental disorder with motor features' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5254 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5255 label: Disable create ongoing diffs workflow on forks - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5256 label: endometriosis / adenomyosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5257 label: add xref to RASopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5258 label: Add doc searching mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5259 label: '[NTR] toxic bronchiolitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/526 label: Question on naming age-of-onset disorders - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5260 label: MONDO:0015265 'bronchiolitis obliterans with obstructive pulmonary disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5261 label: '[NTR] New lung terms - from Mattias and Christina' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5262 label: 'Lung terms (1/3): add synonyms and definitions to lung terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5263 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5264 label: 'Lung terms (2/3): add new lung terms (Mattias and Christina)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5265 label: 'Lung terms (3/3): add new terms associated with genes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5266 label: 'Lung terms (3/3): add new terms associated with genes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5268 label: MONDO:0005272 refractory anemia (plus possible revision to all subtypes of MONDO:0018881 myelodysplastic syndrome) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5269 label: Added the updated exclusion reasons - id: https://api.github.com/repos/monarch-initiative/mondo/issues/527 label: mental disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5270 label: Update enum file for exclusion reasons - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5271 label: Update exclusion reasons in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5272 label: added some x-ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5273 label: '[IFT140-related recessive ciliopathy/IFT140]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5274 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5275 label: updated x-ref for MONDO:0021001 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5276 label: add new term IFT140-related recessive ciliopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5277 label: adding taxons - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5278 label: add synonym to 'immunodeficiency 91 and hyperinflammation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5279 label: 'GH actions: skip diff workflow on forks' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/528 label: Degenerative disease is wrong - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5280 label: Spondyloepiphyseal dysplasia (MONDO_0016761) does NOT involve the metaphyses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5281 label: revise definition of spondyloepiphyseal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5282 label: rename and change definition of spondyloperipheral dysplasia-short ulna syndrome MONDO_0010078 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5283 label: add new term MONDO:0100510 spondyloepimetaphyseal dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5284 label: Review editors notes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5285 label: various issues with 'spondyloepiphyseal dysplasia congenita' MONDO:0008471 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5286 label: Rename has-modifier predicate used to link disease to temporal aspects - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5287 label: "reinstate orphanet branch qualitative or quantitative protein defects\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5288 label: 'PR: Update enum file for exclusion reasons' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5289 label: Update seeAlso to IAO:0000233 to denote a term tracker item? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/529 label: Review placement of DA1A relative to MONDO_0007157 and MONDO_0015240 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5290 label: Add subclass axioms to 'qualitative or quantitative protein defects in neuromuscular diseases' children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5291 label: Proposal for non-human animal disease branch in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5292 label: 'fix xref: NCIT:C18058 Partial Remission is an xref on ''Prieto syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5293 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5294 label: '[Merge]"hemorrhagic syndrome" and "bovine postweaning multisystemic wasting syndrome"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5295 label: remove incorrect xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5296 label: revise synonym for spondyloepiphyseal dysplasia congenita - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5297 label: rename MONDO:0010078 spondyloperipheral dysplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5298 label: add subclass axiom to 'Diamond-Blackfan anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5299 label: updated source for NCIT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/53 label: Investigate incoherencies arising from combining MONDO and NCIT-neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/530 label: '"not a tumor" -- Autoimmune lymphoproliferative syndrome ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5300 label: add parent to hereditary neoplastic syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5301 label: MONDO:0800046 [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5302 label: add parent to 'thyroid hormone metabolism, abnormal 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5303 label: "make 'cerebral palsy, spastic quadriplegic, 2' a child of 'neurodevel\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5304 label: add term MONDO:0100514 familial ovarian carcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5305 label: reclassify microcephaly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5306 label: "add new term MONDO:0100515 mirror movements 1 and/or agenesis of the \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5307 label: "add term MONDO:0100516 complex neurodevelopmental disorder with motor\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5308 label: add obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5309 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/531 label: insomnia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5310 label: replace has_modifier with has_characteristic - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5311 label: 'Do not merge: non-human animal disease branch ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5312 label: 'DO NOT MERGE: test qc check for preferredExternal' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5313 label: Mitochondrial disease naming - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5314 label: "add new term MONDO:0100515 mirror movements 1 and/or agenesis of the \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5315 label: change seeAlso to term tracker item - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5316 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5317 label: revise patterns to use 'has characteristic' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5318 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5319 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/532 label: acute stress reaction - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5320 label: replace seeAlso with term tracker item - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5321 label: 'Need QC check for consistent property_value: IAO:0000233' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5322 label: reclassify terms as inherited dis. suscept. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5323 label: reclassify terms as sus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5324 label: add new term chronic mountain sickness - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5325 label: revise terms susceptibility - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5326 label: fix xsd:string for term tracker items - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5327 label: revise comment on 'COPD, severe early onset' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5328 label: revise parent for 'Helicobacter pylori infection, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5329 label: Add `object_label` column to mondo.sssom.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/533 label: nocturnal paroxysmal dystonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5330 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5331 label: reclassify susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5332 label: reclassify metabolic diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5333 label: 'Add source to Disorders of phenylalanine and tyrosine metabolism ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5334 label: reclassify 'inborn disorder of amino acid absorption and transport'terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5335 label: reclassify disorders of peptide metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5336 label: '[Merge] neurodevelopmental disorder with alopecia and brain abnormalities and ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5337 label: '[NTR] grouping class: metabolic disease, endocrine system disease, or autoimmune disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5338 label: reclassify terms 'inborn carbohydrate metabolic disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5339 label: revise def to use inherited not acquired - id: https://api.github.com/repos/monarch-initiative/mondo/issues/534 label: 'Policy: consider representing explicit abbreviation/full name relationships for terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5340 label: add new terms - children of 1.1 inherited amino acid metabolic disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5341 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5342 label: fix typos in def - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5343 label: reclassify terms under 'disorder of polyamine metabolism' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5344 label: fix defs of inborn_metabolic terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5345 label: PELVIS syndrome - add synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5346 label: PELVIS syndrome - revise synonym subtype to exact - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5347 label: 'These terms used to be "DNA repair disorders" ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5348 label: MONDO:0019443 and DTGA sub-types[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5349 label: Add OMIM 301072 to MONDO:0018346 ferro-cerebro-cutaneous syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/535 label: psychosocial short stature - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5350 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5351 label: revise synonym of 'pelvis syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5352 label: assert children of DNA repair disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5353 label: add parent to 'Lennox-Gastaut syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5354 label: remove random row 84 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5355 label: revise labels for metabolic disease grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5356 label: MONDO:0015796 "acute lung injuy" [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5357 label: Update the exclusion code of obsoleted terms in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5358 label: '[Obsolete] hyperandrogenism ?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5359 label: relabel metabolism terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/536 label: genetic nervous system disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5360 label: adding taxon, second trial - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5361 label: Brain malformations with or without urinary tract defects [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5362 label: add superclass to 'acute lung injury' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5363 label: replace CHEBI with a community curated slim - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5364 label: '[Merge]''histidine metabolism disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5365 label: Replace CHEBI import by OBO slim - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5366 label: '[NTR] Adhesive capsulitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5367 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5368 label: release_2022-09-06 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5369 label: Add Goal to generate obographviz pictures for Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/537 label: neurodevelopmental disease parentage is circular in OLS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5371 label: Updated documentation for exclusion term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5372 label: '[Revise subclass] ''ptosis, hereditary congenital 2'' should not be a child of ''ptosis, hereditary congenital, 1''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5373 label: '[Revise text def] MONDO:0010613 inborn glycerol kinase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5374 label: relabel 'MUTYH-related attenuated familial adenomatous polyposis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5375 label: relabel familial adenomatous polyposis 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5376 label: glycogen storage disease was renamed - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5377 label: "query MONDO:0100473 \tdisorder of peptide and amine metabolism " - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5378 label: 'MONDO:0800153 | urea cycle disorder or inherited hyperammonemia ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5379 label: mondo-with-equivalents.json file not present in 9-06 release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/538 label: https://www.ebi.ac.uk/ols/ontologies/mondo/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FMONDO_0023663 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5380 label: Mondo base download error - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5381 label: add synonym to 'pelvis syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5382 label: revise typo in def of inborn glycerol kinase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5383 label: revise frozen shoulder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5384 label: Mondo constraint checking (GCIs, Modifiers) not working - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5385 label: split COACH syndrome 1 (MONDO:0008996) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5386 label: renamed some 'disorder of sexual differentiation' terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5387 label: (do not review at this moment) non-human proposal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5388 label: '[NTR-HCA] ''choroidal neovascularization''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5389 label: 'Addresses #5388 [NTR-HCA] ''choroidal neovascularization''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/539 label: sulfhemoglobinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5390 label: revise GCIs to use 'bearer of' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5391 label: add xref to 'ferro-cerebro-cutaneous syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5392 label: "add new term MONDO:0100478 brain malformations with or without urinar\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5393 label: reclassify 'ptosis, hereditary congenital 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5394 label: revise def of 'urea cycle disorder or inherited hyperammonemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5395 label: merge MONDO:0042915 Schmitt-Gillenwater-Kelly syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5396 label: obsolete spastic pseudosclerosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5397 label: nonhuman test01 cjm suggestions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5398 label: relabel and review classification of MSD terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5399 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/54 label: Atypical Rett syndrome vs. Rett syndrome, congenital variant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/540 label: Edit to US Rare Disease Definition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5400 label: 'investigate whether #OMIM terms are susceptibilities or proper gene associations' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5402 label: Relabel MONDO:0011291 with name ALG6-CDG1C - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5403 label: Remove old exclusion reasons - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5404 label: 'split term: Knobloch syndrome (MONDO:0009977)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5405 label: MONDO:0020458 hemolytic anemia due to erythrocyte adenosine deaminase overproduction - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5406 label: add parent to MONDO:0054701 'Kleefstra syndrome 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5407 label: add new lung terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5408 label: add source to 'exfoliation syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5409 label: NORM reveals a mistake in QC - id: https://api.github.com/repos/monarch-initiative/mondo/issues/541 label: 'Action item: Create list of GitHub tags for dissemination to the wider ontological groups' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5410 label: Mondo mappings internal representation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5411 label: add new MESH xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5412 label: add defs, syns to lung terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5413 label: add inheritance to lung terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5414 label: add new lung terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5415 label: Add SSSOM mapping pipeline to Makefile - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5416 label: Synonyms not returned in OLS search API - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5417 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5418 label: add new term Mendelian neurodevelopmental disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5419 label: '[Revise subclass] Ververi-Brady syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/542 label: corneal disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5420 label: 'infectious disease: review relationship' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5421 label: revise superclass for 'Ververi-Brady syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5422 label: '[NTR] Body-stalk anomaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5423 label: "revise xref for 'hemolytic anemia due to erythrocyte adenosine deamin\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5424 label: Relabel Request for MONDO:0018760 "WAC-related facial dysmorphism-developmental delay-behavioral abnormalities syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5425 label: Relabel MONDO:0014741 "facial dysmorphism-developmental delay-behavioral abnormalities syndrome due to WAC point mutation" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5426 label: relabel MONDO:0011291 ALG6-CDG1C - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5427 label: Relabel MONDO:0017283 "facial dysmorphism-developmental delay-behavioral abnormalities syndrome due to 10p11.21p12.31 microdeletion" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5428 label: OMIM x-ref on MONDO:0007924 Bannayan-Riley-Ruvalcaba syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5429 label: Duplicate labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/543 label: cervical aortic arch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5430 label: xrefs vs basicPropertyValues exactMatch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5431 label: CDG to Congenital Disorder of Glycosylation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5432 label: Name suggestion for Diffuse Intrinsic Pontine Glioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5433 label: Review of Dopa-responsive dystonias - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5434 label: Download link is not working - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5435 label: remove obs tags from 'ALPI-related inflammatory bowel disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5436 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5437 label: merge acute pulmonary heart disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5438 label: "merge terms into MONDO:0010663 'X-linked intellectual disability-hypo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5439 label: add obs tag to 'gestational trophoblastic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/544 label: Moyamoya and down syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5440 label: add qc check for two replaced by annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5441 label: add parents to terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5442 label: relabel CDG terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5443 label: normalize + add obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5444 label: renamed MONDO:0013463 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5445 label: Create qc-check-for-two-replaced-by-annotations.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5446 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5447 label: normalize - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5448 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5449 label: release_2022-10-03 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/545 label: mediastinal diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5450 label: add synonym to 'diffuse intrinsic pontine glioma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5451 label: 'split term: diaphragmatic malformation and abdominal wall malformation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5452 label: revise OMIM x-ref on MONDO:0007924 Bannayan-Riley-Ruvalcaba syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5453 label: merge erysipeloid - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5454 label: merge spinocerebellar ataxia type 16 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5455 label: relabel 'DeSanto-Shinawi syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5456 label: add obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5457 label: merge globe disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5458 label: '[Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5459 label: merge thyroid adenoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/546 label: interstitial myocarditis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5460 label: merge liver neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5461 label: Mondo version on EBI? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5462 label: cardiogenic shock - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5463 label: black widow spider envenomation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5464 label: "merge global developmental delay-alopecia-macrocephaly-facial dysmorp\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5465 label: create 'encephalitis, acute, infection-induced, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5466 label: Fix Mondo mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5467 label: Add base plus release file to Mondo and check into git - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5469 label: frostbite - id: https://api.github.com/repos/monarch-initiative/mondo/issues/547 label: infectious disease ?= peach allergy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5470 label: Platinum-induced ototoxicity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5471 label: periprosthetic joint infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5472 label: thyroid eye disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5473 label: revise xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5474 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5475 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5476 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5477 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5478 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5479 label: add xref to pheochromocytoma-paraganglioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/548 label: myocardial disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5480 label: add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5481 label: Addressing the has_modifier relation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5482 label: reclassify 'hearing loss, cisplatin-induced, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5483 label: revise suscept terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5484 label: revise classifications - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5485 label: 'Do not merge: testing ICD10 mapping' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5486 label: release_2022-10-11 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5487 label: revise ICD10 mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5488 label: 'do not merge: test adding ICD10 mappings' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5489 label: 'do not merge: ICD10 mappings' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/549 label: rheumatologic disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5490 label: Icd10 mapping 5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5491 label: Filling in `object_label` for *.sssom.tsv file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5492 label: ICD10 mapping - add xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5493 label: chronic and acute graft vs. host disease are children of Mendelian disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5494 label: add OMIM xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5495 label: neoplastic meningitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5496 label: acute repetitive seizures - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5497 label: hyphema - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5498 label: malignant pleural effusion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5499 label: created new visceral heterotaxy term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/55 label: Hauptmann-Thannhauser and EDMD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/550 label: arthritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5500 label: merged terms for non-human animal diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5501 label: MONDO:0017454 triphalangeal thumb-polysyndactyly syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5502 label: create graft vs. host disease, susceptibility to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5503 label: '[potential merge] ''hypercalciuria, absorptive, 2'' and ''idiopathic inherited hypercalciuria''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5504 label: revise syns for 'hypercholesterolemia, familial, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5505 label: "add new term dystonia, dopa-responsive, with or without hyperphenylal\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5506 label: '[NTR] TUBB3-related tubulinopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5507 label: create new axiom annotation to indicate an OMIM term is an included entry - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5508 label: revise ICD10 xref for MONDO:0007950 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5509 label: major depressive disorder 1 and 2 are disease susceptibilities, not diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/551 label: Sensorineural hearing loss - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5510 label: reclassify MDD1 and 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5511 label: should there be a relatedTo annotation for xrefs on susceptibility terms? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5512 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5513 label: review classification of "human herpesvirus 8, susceptibility to" (MONDO:0013909) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5514 label: obsolete head disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5515 label: Reran `make sssom` and `make mappings` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5516 label: patterns for non-human diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5517 label: '[Revise subclass] ''disease has feature''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5518 label: "Request to not obsolete \u201Csyndromic constitutional thrombocytopenia\u201D\ \ (MONDO:0018795)" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5519 label: remove obs tag from syndromic constitutional thrombocytopenia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/552 label: skeletal tuberculosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5520 label: '[NTR] IKBKG-related immunodeficiency with or without ectodermal dysplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5521 label: OMIM 613735 mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5522 label: '[NTR/gene] PPP2R1A-related disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5523 label: Request to rename and split "Parkinsonism-dystonia, infantile, 1" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5524 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5525 label: transplantation-related disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5526 label: added non-human animal neoplasm terms from NCIT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5527 label: '[NTR] PNPLA6-related spastic paraplegia with or without ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5528 label: poisonings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5529 label: phenytoin toxicity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/553 label: terms are displaying differently in OLS than they are in Protege - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5530 label: pulmonary hypertension, neonatal, susceptibility to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5531 label: hand-foot syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5532 label: intrauterine fetal demise - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5533 label: obstetric/neonatal diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5534 label: constitutional delay of growth and puberty - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5535 label: protothecosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5536 label: spasticity due to spinal cord injury or multiple sclerosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5537 label: List of 29 additional MeSH Xrefs/exactMatch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5538 label: tissue agnostic cancers - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5539 label: Review 'Mendelian disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/554 label: familial meningioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5540 label: 'Iatrogenic disease: Procedure-related complications' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5541 label: Morton neuroma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5542 label: opioid-induced constipation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5543 label: intestinal fistula - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5544 label: baclofen withdrawal syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5545 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5546 label: '[Revise subclass] DeSanto-Shinawi Syndrome due to 10p11.21p12.31 microdeletions (MONDO:0017283)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5547 label: add obsoletion tag for November release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5548 label: 'OBO Academy exercise: relabel term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5549 label: 'OBO Academy exercise: add axioms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/555 label: encephalopathy, acute, infection-induced, susceptibility to, 4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5550 label: 'OBO Academy exercise: create a new term' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5551 label: testing QC for obo academy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5552 label: change name for MONDO:0015265 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5553 label: release 221101 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5554 label: add gene relationship to Siddiqi syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5555 label: update release workflow documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5556 label: obsolete gestational trophoblastic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5557 label: update exclusion code document - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5558 label: remove "obsoletion candidate" tag from obsoleted terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5559 label: split Knobloch syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/556 label: atrial heart septal defect - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5560 label: added endpoint to report document - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5561 label: Review obsoletion candidates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5562 label: '[NTR]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5563 label: '[NTR] CHRNG-associated hypo-akinesia disorder of prenatal onset' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5564 label: Relabel request for Partial epilepsy (MONDO:0005384) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5565 label: Add UDP-N-acetylglucosamine-1-phosphotransferase subunit alpha/beta deficiency [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5566 label: Logical axioms for non-human neoplasms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5567 label: Revise logical definition for feline leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5568 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5569 label: "add new term MONDO:0100122 UDP-N-acetylglucosamine-1-phosphotransfera\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/557 label: deSanctis Cacchione syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5570 label: relabel term 'focal epilepsy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5571 label: add new term PNPLA6-related spastic paraplegia with or without ataxia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5572 label: add terms tubulinopathy and TUBB3-related tubulinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5573 label: add new terms MONDO:0100123 and MONDO:0100127 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5574 label: "add new term retinal dystrophy-ataxia-pituitary hormone abnormality-h\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5575 label: add new term CHRNG-associated hypo-akinesia disorder of prenatal onset - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5576 label: "reclassify 'DeSanto-Shinawi Syndrome due to 10p11.21p12.31 microdelet\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5577 label: add new term pulmonary hypertension, neonatal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5578 label: add term replaced by - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5579 label: merged MONDO:0006928 and MONDO:0100450 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/558 label: ensure that all workshop attendees are on a MONDO list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5580 label: reclassify 'phenytoin toxicity' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5581 label: udpate MESH xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5582 label: '[NTR] Microcephaly with lissencephaly and/or hydranencephaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5583 label: updated x-red for MONDO:0017454 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5584 label: updated x-ref for MONDO:0005272 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5585 label: Adding OMIA related information to MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5586 label: "add new term 'IKBKG-related immunodeficiency with or without ectoderm\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5587 label: add new term PPP2R1A-related intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5588 label: review children of syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5589 label: revise subclasses of 'X-linked syndromic intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/559 label: Distinguishing between disease and phenotypic features in MonDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5590 label: OMIM included entries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5591 label: revise susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5592 label: revise classification of suscept. terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5593 label: revise psoriasis, sucept - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5594 label: '[NTR] gastric intestinal metaplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5595 label: revise susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5596 label: revise susceptibility classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5597 label: Create qc-exact-synonyms-non-exact-mappings.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5598 label: update susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5599 label: revise syn scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/56 label: Fix import chain, ncbitaxon missing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/560 label: Marfan 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5600 label: add diabetes mellitus, ketosis-prone - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5601 label: add dermatitis, atopic, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5602 label: Workflow that runs `ontobot-change-agent` when relevant issue is created/edited. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5603 label: Issue 4882t - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5604 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5605 label: Missing OMIM IDs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5606 label: (academy lesson) new Subclass for 'avian leukosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5607 label: Added subclass of to 'avian leukosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5608 label: revise syns for INCLUDED entries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5609 label: revise synonyms for INCLUDED entries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/561 label: MONDO:0100038 attribution - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5610 label: revise synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5611 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5612 label: split out Included entries from OMIM - add as new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5613 label: revise synonyms for Included entries in OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5614 label: remove `http://purl.obolibrary.org/obo/excluded_subClassOf` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5615 label: Create project-management.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5616 label: remove hash IRIs for properties - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5617 label: fix annotation for MONDO:0010539 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5618 label: Omim slurp nov - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5619 label: SPLIT OMIMPS terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/562 label: Various - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5620 label: Omim slurp rest november - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5621 label: Remove two non-standard properties from Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5622 label: Update patterns, matches and docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5623 label: platelet-type von Willebrand disease preferred label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5624 label: "remove all \u2018disease has features\u2019 for any class that we already\ \ have HPO annotations (from OMIM or Orphanet)" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5625 label: CSS (Chrug-Strauss Syndrome) is a synonym/acronym for MONDO:0015943 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5626 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5627 label: Go through papers that have mentioned Mondo and find out what they are doing with Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5628 label: Need list of Mondo users, contact info and projects they work on - id: https://api.github.com/repos/monarch-initiative/mondo/issues/563 label: 'merge: glycogen storage disease due to phosphorylase kinase deficiency + Glycogen Storage Disease Type IX,' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5631 label: MONDO:0007136 & obsolete MeSH ID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5632 label: MONDO:0007175 PR interval, variation 1N - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5633 label: MONDO:0011385 intervertebral disc degenerative disorder & OMIM 603932 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5634 label: MONDO:0007842 Ehlers-Danlos syndrome type 11 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5635 label: removed "obsoletion candidate" tag and obsoletion date - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5636 label: 'new parent term: proliferative vitreoretinopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5637 label: 'new term: "microcephaly with lissencephaly and/or hydranencephaly"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5638 label: "new terms and new classification for \"SLC6A3-related Dopamine Transpo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5639 label: 'International Consensus Classification of acute lymphoblastic leukemia/lymphoma ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/564 label: merge MONDO:0022566 BEST1 retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5640 label: MONDO_0007818 has an obsolete OMIM reference - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5641 label: add gene associations to diseases based on ClinGen curation for SMAD4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5642 label: SPARQL query for list of rare diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5643 label: update MESH xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5644 label: remove obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5645 label: revise OMIM xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5646 label: remove editor note - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5647 label: "revise xrefs for 'brain malformations with or without urinary tract d\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5648 label: revise classification of 'transient tyrosinemia of the newborn' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5649 label: add vascular disorder as a parent of cardiogenic shock - id: https://api.github.com/repos/monarch-initiative/mondo/issues/565 label: Parents of MONDO:0018982 'Niemann-Pick disease type C' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5650 label: add new term opioid-induced constipation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5651 label: 'Ready to merge: add term: ''gastric intestinal metaplasia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5652 label: '[Merge] ''5-fluorouracil poisoning'' and ''5-fluorouracil toxicity''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5653 label: '[Revise subclass] multiple endocrine neoplasia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5654 label: '[Revise subclass] ataxia-pancytopenia syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5655 label: '[Revise subclass] spinal muscular atrophy-progressive myoclonic epilepsy syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5656 label: '[Revise subclass] congenital structural myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5657 label: '[Revise subclass] beta thalassemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5658 label: '[NTR/gene] Hereditary inclusion-body myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5659 label: '[Revise subclass] Smith-Magenis syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/566 label: Zollinger-Ellison syndrome should not be classified as a subtype of tumor/neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5660 label: '[Revise text def] Mallory-Weiss syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5661 label: Review superclass for chronic mucocutaneous candidiasis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5662 label: '[Revise subclass] hereditary ataxia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5663 label: '[Revise subclass] cutis laxa, autosomal recessive, type 1A' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5664 label: add comment to 5-fluorouracil toxicity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5665 label: '[Revise subclass] orofacial clefting syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5666 label: '[Revise subclass] DNA repair disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5667 label: retinitis pigmentosa - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5668 label: exclude superclass of 'retinitis pigmentosa' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5669 label: '[Revise text def] Stankiewicz-Isidor syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/567 label: A few potential disease duplications - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5670 label: revise classifications per Peter's requests - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5671 label: '[Revise subclass] encephalopathy, neonatal severe, with lactic acidosis and brain abnormalities' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5672 label: reclassify cutis laxa, autosomal recessive, type 1A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5673 label: '[NTR] hereditary bleeding disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5674 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5675 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5676 label: 'RemovedEdge: chondrocalcinosis is-a metabolic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5677 label: rare diseases sparql queries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5678 label: add new poisoning terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5679 label: make table with responsibilities - id: https://api.github.com/repos/monarch-initiative/mondo/issues/568 label: add `free` command to see docker memory profile when its run - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5680 label: inborn errors of immunity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5681 label: '[NTR/gene] Inherited Kidney Disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5682 label: '[NTR/gene] obsolete genetic skin disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5683 label: '[Revise subclass] isolated congenital microcephaly' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5684 label: relabel 'inborn error of immunity' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5685 label: '[Revise subclass] Parkinson disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5686 label: 'Proposal: add synonym ''intrauterine fetal demise (IUFD)'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5687 label: '[Revise subclass] Fanconi anemia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5688 label: '[NTR/gene] Neurocutaneous Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5689 label: 'Proposal: add synonym ''intrauterine fetal demise (IUFD)'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/569 label: 'ready to merge: relabeled MONDO:0010843' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5690 label: 'Proposal: add synonym ''intrauterine fetal death'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5691 label: add new term inherited kidney disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5692 label: 'Proposal: add synonym ''intrauterine fetal death'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5693 label: '[NTR] ClinGen gene-based retinopathy terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5694 label: add new retinal terms for ClinGen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5695 label: Review congenital pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5696 label: add new retinopathy terms for ClinGen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5697 label: Question about axiom annotations on subclass and equivalent class axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5698 label: update OMIM xrefs - obsolete OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5699 label: release_2022-12-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/57 label: Mondo metabolomics definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/570 label: 'revised label for MONDO:0043707, closes #545' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5700 label: '[NTR] TUBB2A-related Tubulinopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5701 label: '[Merge] ''immunodeficiency without anhidrotic ectodermal dysplasia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5702 label: add new term Mendelian encephalopathy and reclassify children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5703 label: rename 'Mendelian syndromes with cleft lip/palate' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5704 label: reclassify DNA repair disease as a Mendelian disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5705 label: ORDO slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5706 label: add xref to Included entry - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5707 label: 'Proposal: add synonym ''stillbirth'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5708 label: 'Proposal: add synonym ''stillbirth'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5709 label: Add condition to avoid random workflow error. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/571 label: "removed superclass 'immune system disease' from MONDO:0006988 sulfhem\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5710 label: added new document about "bulk removal" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5711 label: add new terms from 'included' omim entries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5712 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5713 label: Obsoletion TSV Release file has links to non-mondo sites? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5714 label: Added "bulk-removal" to the mkdocs.yml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5715 label: Add seeAlso QC check and fix obsoletion report - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5716 label: Concerns about Carey-Fineman-Ziter syndrome (MONDO:0009700) as a candidate for obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5717 label: MONDO:0800129 autoinflammatory disease, X-linked - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5718 label: MONDO:0030711 anemia, congenital dyserythropoietic, IIA IIIB, autosomal recessive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5719 label: "relabel MONDO:0030711 'Anemia, congenital dyserythropoietic, type III\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/572 label: Issue 520 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5720 label: revisit issues 4549 and OMIM:137215 and Orphanet:26106 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5721 label: Removed poetry dependency and triggers QC checks - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5722 label: Bump certifi from 2022.9.24 to 2022.12.7 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5723 label: remove over-classification under diabetes mellitus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5724 label: add id-range for Katie Mullen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5725 label: '[NTR] Microcephaly with intellectual disability ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5726 label: Add non-human animal diseases from VeNom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5727 label: exclude synucleinopathy as a superclass of 'Parkinson disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5728 label: update IDs for terms to be split - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5729 label: "fix capitalization of 'X-linked Mendelian susceptibility to mycobacte\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/573 label: 'NTR: normal tension glaucoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5730 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5731 label: fix typo in synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5732 label: revise xref for 'CDH1-related diffuse gastric and lobular breast cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5733 label: merged MONDO:0015522 into MONDO:0018677 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5734 label: add new term microcephaly with intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5735 label: relabel MONDO:0008332 platelet-type von Willebrand disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5736 label: "add synonym and fix capitalization for 'eosinophilic granulomatosis w\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5737 label: relabel MONDO:0007175 PR interval, variation in - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5738 label: revise xref to OMIM:603932 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5739 label: relabel MONDO:0007842 joint laxity, familial - id: https://api.github.com/repos/monarch-initiative/mondo/issues/574 label: 'question: Asthma has anxiety as a feature' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5740 label: '[NTR] infantile-onset epilepsy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5741 label: update x-ref omim obsolete source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5742 label: '[NTR] disambiguate "pre menopausal osteoporosis" from "idiopathic juvenile osteoporosis" ? ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5743 label: added an important note about multiple annotations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5744 label: split x-ref of susceptibility versus 'immunodeficiency 33' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5745 label: add new term infantile-onset epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5746 label: 'New term: TUBB2A-related tubulinopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5747 label: added parent for 'chronic mucocutaneous candidiasis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5748 label: obsolete glaucoma 1, open angle, G - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5749 label: obsolete hyperandrogenism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/575 label: Issue 574 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5750 label: add gene associations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5751 label: add video to Exclude a superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5752 label: Add video exclude superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5753 label: '[NTR] CACNA1A Complex Neurodevelopmental Disorder ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5754 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5755 label: Remove OBA from list of imports and ensure "disease_has_feature" not used in conjunction with attributes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5756 label: MONDO:0800226 & MONDO:0008498[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5757 label: added new term for "protothecosis" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5758 label: MONDO:0011649 and MONDO:0800268 ATRIOVENTRICULAR SEPTAL DEFECT, SUSCEPTIBILITY TO, 1, INCLUDED; AVSD1 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5759 label: MONDO:0013696 typo in "2p16.3" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/576 label: CSGALNACT1-CDG - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5760 label: MONDO:0033187 & MONDO:0014781[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5761 label: MONDO:0014834 & MONDO:0044637[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5762 label: MONDO:0014877 & MONDO:0018834 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5763 label: MONDO:0016163 and MONDO:0008120 ? [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5764 label: added "baclofen withdrawal syndrome" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5765 label: MONDO:0016317 & MONDO:0021081 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5766 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5767 label: MONDO:0019899 distal monosomy 20q[Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5768 label: revisit Testicular regression syndrome and 46,XY sex reversal 11 and management of other OMIM alternate names - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5769 label: added obsoletion candidate tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/577 label: Change in disease nomenclature for MONDO:0011581 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5770 label: release 230104 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5771 label: "MONDO:0800318\tEmery-dDeifuss muscular dystrophy 6, x-linked" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5772 label: "merged histidine metabolism disease' into inborn disorder of histidin\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5773 label: "merged merge MONDO:0012017 'Parkes Weber syndrome' into MONDO:0020783\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5774 label: Issue 5501b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5775 label: Mondo's names use x-linked instead of X-linked - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5776 label: MONDO:0011842 Grn-related frontotemporal lobar degeneration with Tdp43 inclusions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5777 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5778 label: Wrong AP in MONDO:0009004 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5779 label: '[NTR] DICER1-related tumor predisposition' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/578 label: 'Creation of a new disease ontology class: Cardiocutaneous syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5780 label: Malformed reference in MONDO:0000890 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5781 label: '**MONDO:0015924 pulmonary arterial hypertension**' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5782 label: familial lambdoid synostosis MONDO:0017984 [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5783 label: replaced by tag for hepatocellular_carcinoma is just "disease", seems wrong? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5784 label: MONDO:0009809 multicentric osteolysis, nodulosis, and arthropathy[Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5785 label: Replace "Mitchell syndrome" with "ACOX1 Dysregulation" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5786 label: '[Revise text def]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5787 label: '[NTR/gene] LTBP2-related ocular dysgenesis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5788 label: Relabel "anterior segment dysgenesis 8" with "CPAMD8-related anterior segment dysgenesis" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5789 label: '[NTR/gene] FOXC1-related anterior segment dysgenesis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/579 label: Should Orphanet:98301 ! Laminopathy be equivalent to MONDO:0021106 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5790 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5791 label: Remove ICD10EXP prefixes from Mondo prior to release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5792 label: 'Relabel: self-limited familial and non-familial infantile seizures' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5793 label: '[NTR] Self-limited familial neonatal-infantile epilepsy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5794 label: question about MONDO:0009136 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5795 label: 'Multiple obsolete OrphaIDs: potentially still in Mondo?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5796 label: Congenital heart disease, multiple types-GATA4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5797 label: Add prefix map for `IMDRF` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5798 label: Add EFO:0000519 to glioblastoma (MONDO:0018177) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5799 label: add dbxref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/58 label: incoherencies arising from syndromic vs nonsyndromic disjointness - id: https://api.github.com/repos/monarch-initiative/mondo/issues/580 label: "Revise classification of \u2018brain hypoxia - ischemia\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5800 label: revise Orphanet xref source (obsolete in Orphanet) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5801 label: '[Obsolete] MONDO:0015594 non-paraneoplastic limbic encephalitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5802 label: '[Obsolete] MONDO:0044683 limbic encephalitis with neurexin-3 antibodies' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5803 label: revise labels/syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5804 label: fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5805 label: add new term self-limited familial neonatal-infantile epilepsy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5806 label: add term DICER1-related tumor predisposition - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5807 label: split OMIMPS terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5808 label: remove incorrect synonym for peanut allergic reaction - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5809 label: MONDO:0800316 and MONDO:0018247[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/581 label: Revise placement of MONDO:0016823 'mycetoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5810 label: MONDO:0800343 & MONDO:0016202 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5811 label: MONDO:0800303 and MONDO:0016605[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5812 label: create rare disease view/slim - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5813 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5814 label: ICD-10 links broken - bring them back - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5815 label: relabel MONDO:0100024 (self-limited familial infantile epilepsy) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5816 label: 'New term: ''premenopausal osteoporosis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5817 label: New term 'hand-foot syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5818 label: reviewed subclass for 'strabismus, susceptibility to' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5819 label: updated typo in label for MONDO:0013696 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/582 label: 'Creation of disease entity: Neonatal diabetes, congenital sensorineural deafness and congenital cataracts' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5820 label: updated the classification for AVSD1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5821 label: 'Issue 5785 - added "ClinGen preferred" tag and naming convention documentation ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5822 label: updated typo in x-ref of MONDO:0000890 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5823 label: fix incorrect annotation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5824 label: "revise subclasses of multicentric osteolysis-nodulosis-arthropathy sp\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5825 label: updated source for MESH for Zika congenital syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5826 label: added new label for MONDO:0015017 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5827 label: revise def for peroxisomal disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5828 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5829 label: 'DO NOT MERGE: Add subset system and Rare disease subset' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/583 label: 'Creation of disease term: Hearing impairment and infertile male syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5830 label: '[NTR/gene] ALS2-related motor neuron disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5831 label: Add obsolesence QC check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5832 label: added exclusion reason - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5833 label: updated source for MESH:1622152 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5834 label: GALT transferase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5835 label: GALM mutarotase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5836 label: "add new term pulmonary arterial hypertension with overt features of v\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5837 label: Add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5838 label: add synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5839 label: revise def for pulmonary arterial hypertension - id: https://api.github.com/repos/monarch-initiative/mondo/issues/584 label: 'added new term SLC10A7 deficiency. Closes #478' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5840 label: update ORCID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5841 label: Added obsoletion-candidate tag for Feb23 release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5842 label: "reclassify 'pulmonary veno-occlusive disease and/or pulmonary capilla\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5843 label: 'MONDO:0021764: capitalize Preis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5844 label: fix typo acrofacial dysostosis Preis type - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5845 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5846 label: Add mondo-all.sssom.tsv and mondo-xrefs.sssom.tsv to `src/ontology/mappings` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5847 label: Create a template for clinicians to submit new term requests or revisions to Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5848 label: Develop a standard template for bulk ID submissions and an SOP that mandates its use - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5849 label: Creating a comprehensive curation guide for Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/585 label: Issue 500 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5850 label: obsolete 'gastric juice peptides' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5851 label: add obs tag to gastric juice peptides - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5852 label: reclassify syndromic diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5853 label: Remove all terms for which the single source of evidence is ORDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5854 label: '[Obsolete] MONDO:0006514 ''recalcitrant atopic dermatitis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5855 label: 'split term: MONDO:0011292 ''dermatitis, atopic''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5856 label: allergy classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5857 label: Remove unsupported associations - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5858 label: rename root term to "disease" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5859 label: infectious disease should not be a separate branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/586 label: 'obsoleted class MONDO_0002932. Closes #567' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5860 label: '''encephalopathy, acute, infection-induced'' OMIMPS should be a susceptibility' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5861 label: '[Obsolete] ''infectious disease or post-infectious disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5862 label: fix typo in hepatitis D virus infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5863 label: change muscular disorder to be skeletal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5864 label: add new allergy grouping terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5865 label: add syns to alpha-gal syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5866 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5867 label: axiomatizing monogenic-X. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5868 label: release 230206 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5869 label: testing new protege on windows - id: https://api.github.com/repos/monarch-initiative/mondo/issues/587 label: Issue 263 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5870 label: obsoleting group_of_disorder terms that have no metadata and are sourced entirely from ordo. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5871 label: '[NTR]: Cardiac malformation reporting system (Von Praagh) Notation?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5872 label: split dermatitis, atopic, susceptibility to, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5873 label: Fix typos - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5874 label: relabel encephalopathy, acute, infection-induced, susceptibility to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5875 label: merge muscular disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5876 label: update obs comments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5877 label: merge hypotrichosis 4 and MONDO:0018631 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5878 label: 'obsolete genetic cardiac rhythm disease ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5879 label: MONDO:0010783 Alzheimer disease, susceptibility to, mitochondrial - id: https://api.github.com/repos/monarch-initiative/mondo/issues/588 label: Issue 505 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5880 label: reinstate term Alzheimer disease, susceptibility to, mitochondrial - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5881 label: Acid Ceramidase Deficiency [NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5882 label: separate infectious disease for human and non-human - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5883 label: merge constriction rings syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5884 label: relabel bronchiolitis obliterans syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5885 label: saving Mondo after editing n new Protege on windows - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5886 label: add new term 'congenital heart disease, multiple types-GATA4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5887 label: add new term acid ceramidase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5888 label: revise sudden cardiac death and related terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5889 label: add new term congenital heart disease, multiple types-GATA4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/589 label: Issue 514 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5890 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5891 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5892 label: merged MONDO:0010368 into MONDO:0010386 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5893 label: review OMIM links for inclusion in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5894 label: Removing OBA from Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5895 label: ask Maria Della Rocca about adding Global Genes to Mondo users list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5896 label: exclude superclass of diabetes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5897 label: review 'Anaplasmataceae infectious disease' in human and non-human animal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5898 label: 'how should we classify "zoonosis"? ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5899 label: '[Obsolete] ''SARS-CoV-2-related disease'' (MONDO:0100318)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/59 label: 'add logical def to hyperprolactinemia (disease) ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/590 label: Definition of irritable bowel syndrome is (slightly) incorrect - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5900 label: 'Add sssom:object_label AP to ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5901 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5902 label: MONDO:0032738 and MONDO:0010957[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5903 label: MONDO:0010205 Wolman disease with hypolipoproteinemia and acanthocytosis [Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5904 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5905 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5906 label: '[Obsolete]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5907 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5908 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5909 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/591 label: rare genetic primary immunodeficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5910 label: Mitochondrial complex II deficiency, nuclear type 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5912 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5913 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5914 label: revise allergy branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5915 label: MONDO:0013166 GABA aminotransferase or aminotransaminase? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5916 label: add clingen as source to superclass syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5917 label: exclude superclass X-linked syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5918 label: exclude superclass syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5919 label: autism susceptibility (to) 1[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/592 label: "added new term MONDO:0100069 hearing impairment and infertile male sy\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5920 label: 'exclude superclasses: syndromic intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5921 label: Uberon unsatisfiable classes [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5922 label: neuronal ceroid lipofuscinosis, late infantile [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5923 label: familial monosomy 7 syndrome & monosomy 7 myelodysplasia and leukemia syndrome [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5924 label: Removing a number of incomplete qualifiers and xrefs from Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5926 label: normalize - new Protege - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5927 label: Fix some URIs in equivalencies.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5928 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5929 label: add slurp workflow documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/593 label: 'edited subclassOf axiom on MONDO:0017979. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5930 label: ordo slurp - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5931 label: exclude children of syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5932 label: add superclass X-linked syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5933 label: exclude superclass syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5934 label: exclude superclass syndromic intellectual disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5935 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5936 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5937 label: P1 issue 29b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5938 label: add section on Curation Workflow Overview - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5939 label: update Obs documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/594 label: 'obsoleted class MONDO:0023663. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5940 label: reinstate term genetic skin disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5941 label: mapping DO exact - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5942 label: Add exact-lexical matching into mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5943 label: Create kglc-workflow.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5944 label: 'Mapping: exact lex match - DO' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5945 label: 'Mapping: exact lex match - NCIT' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5946 label: 'New term: Morton Neuroma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5947 label: rename file to add-synonym.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5948 label: revise doc on making simple changes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5949 label: 'relabel MONDO:0013166 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/595 label: 'added additional attributions to term MONDO:0100038. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5950 label: relabel MONDO:0013166 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5951 label: '[test] add new class ''intraventricular hemorrhage''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5952 label: '[NTR] need genetic terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5953 label: KGCL workflow questions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5954 label: '[test] add new class ''intraventricular hemorrhage''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5955 label: create GitHub issue template for KGLC templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5956 label: 'Disease vs Phenotype terms revision: "hemorrhage"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5957 label: 'Disease vs Phenotype terms revision: "seizure"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5958 label: rename MONDO:0000001 disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5959 label: added prenatal terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/596 label: obsoleted MONDO:0022566. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5960 label: 'new term: intestinal fistula' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5961 label: removing injury branch from under disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5962 label: Add ICD9 + HPO x-refs to hypertrophic cardiomyopathy (MONDO:0005045) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5963 label: 'Disease vs Phenotype terms revision: "fistula"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5964 label: rename human disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5965 label: PIGN-related inherited GPI deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5966 label: 'new term: constitutional delay of growth and puberty' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5967 label: Weekly automated mappings update. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5968 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5969 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/597 label: Issue 438 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5970 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5971 label: New cancer terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5972 label: 'new term: neoplastic meningitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5973 label: add explanation of HOW TO INTERPRET AN 'AND' OR AN 'OR' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5974 label: obsolete sudden cardiac death and familial sudden death - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5975 label: suggested changes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5976 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5977 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5978 label: added prenatal terms (new PR) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5979 label: trying to add http://purl.obolibrary.org/obo/NCBITaxon_1319 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/598 label: 'Ready to merge: Issue 528 - removed superclass from MONDO_0006044 nephrosclerosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5980 label: added obsoletion tags for March release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5981 label: relabelled Mendelian to hereditary disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5982 label: add xrefs to 'hypertrophic cardiomyopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5983 label: added bulk request documentation and template - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5984 label: add new terms genetic muscle disorder and metabolic muscle disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5985 label: 'Mapping issue: lexical matching on exact synonym with "ambiguous" synonym type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5986 label: 'MONDO:0001142 : review ''non-neoplastic salivary gland disorder'' synonym type' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5987 label: 'MONDO:0001449: review synonym type for ''Lymphocytic Meningitis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5988 label: MONDO:0002037 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5989 label: Separate out syndromic vs non-syndromic diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/599 label: Synonym on MONDO_0009196 ermine phenotype is wrong - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5990 label: split out term pulmonary disease, chronic obstructive, susceptibility to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5991 label: merge adrenal/paraganglial tumor - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5992 label: add new term pulmonary disease, chronic obstructive, susceptibility to - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5993 label: review synonym types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5994 label: 'review synonym types ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5995 label: "relabeled MONDO:0100009 to 'Structural congenital heart disease, mult\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5996 label: PIGN - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5997 label: normalization pre-release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5998 label: change label for 'disease or disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/5999 label: release_2023-03-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6 label: OWLEntityRenamer ignores some URIs, leaving ghost alt_ids - id: https://api.github.com/repos/monarch-initiative/mondo/issues/60 label: add logical definition to MONDO:0006661 ascorbic acid deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/600 label: 'removed subclassOf assertion for ''cerebral palsy''. addresses #528' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6000 label: MONDO:0008941 has no parent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6001 label: updated definitions for cancer terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6002 label: added transplantation-related disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6003 label: MONDO_0004375 end stage renal failure add xref to ICD-10 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6004 label: MONDO:####-obsoleted used for source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6005 label: '[NTR] POLD1-related Polyposis and Colorectal Cancer Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6006 label: '[NTR] CTNNA1-Related Diffuse Gastric and Lobular Breast Cancer Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6007 label: '[NTR] POLD1-related Polyposis and Colorectal Cancer Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6008 label: review "muscle tissue disorder" branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6009 label: '"hereditary" diseases: review patterns' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/601 label: 'Requires discussion: Issue 528c - removed children of ''degenerative disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6010 label: muscle disorder branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6011 label: review "skeletal muscle neoplasm" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6012 label: '"myopathy" (MONDO:0005336) : should we keep? obsolete? merge? ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6013 label: '[NTR] Cleidocranial dysplasia and related disorders' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6014 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6015 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6016 label: Adding includedEntryInOMIM to QC and mapping generation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6017 label: '[Obsolete] ''hyperlipoproteinemia type IV'' MONDO:0007761' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6018 label: updated synonym types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6019 label: Ontology for disorders cased by variants in PSAP - id: https://api.github.com/repos/monarch-initiative/mondo/issues/602 label: Issue 599 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6020 label: Relabel UDP-N-acetylglucosamine-1-phosphotransferase subunit alpha/beta deficiency (MONDO:0100122) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6021 label: Relabel mucolipidosis type III gamma (MONDO:0009652) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6022 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6023 label: '[Revise subclass] Cockayne' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6024 label: '[Revise subclass] Structural heart defects and renal anomalies syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6025 label: Tuberous sclerosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6026 label: Should "chromosomal disorder" (MONDO:0019040) be a 'hereditary disease' (MONDO:0003847)? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6027 label: updated some synonym scope - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6028 label: new DO mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6029 label: merge hypophosphatasia, perinatal lethal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/603 label: Revise classification of MONDO:0003569 'cranial nerve neuropathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6030 label: merge rhegmatogenous retinal detachment, autosomal dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6031 label: merge contiguous ABCD1/DXS1375E deletion syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6032 label: add xref to 'end stage renal failure' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6033 label: Add Additional Information to Rare Disease Terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6034 label: Add a manually curated seed to pull in terms from modules - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6035 label: OMIM 255310 move to MONDO_0800341 "cap myopathy 1" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6036 label: MONDO:0008070 and MONDO:0020342 (based on MIM 161800)[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6037 label: added EquivalentTo for cancer terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6038 label: merged MONDO:0011649 to MONDO:0800268 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6039 label: Merge MONDO:0033187 into MONDO:0014781 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/604 label: removed SubClass Of assertion from MONDO:0017979 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6040 label: Merge MONDO:0018834 into MONDO:0014877 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6041 label: relabel GNPTAB-mucolipidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6042 label: add Exscientia to Mondo users list on website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6043 label: remove Genomics England Panel App from Mondo users website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6044 label: add Global genes as user on website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6045 label: MONDO:0012018 & MONDO:0008409 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6046 label: 'review ''juvenile absence epilepsy'' : potential split ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6047 label: review 'aarskog syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6048 label: DO alignment (partial) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6049 label: ORPHANET x-ref on Carey-Fineman-Ziter syndrome /1 & ADD CFZS2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/605 label: 'Creation of term: healthy volunteer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6050 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6051 label: ORPHA:459061 mapping & Developmental delay with short stature, dysmorphic facial features, and sparse hair 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6052 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6053 label: add new term MONDO:0100217 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6054 label: add new term 'PSAP-related sphingolipidosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6055 label: '[Obsolete] MONDO:0007981 ''metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6056 label: "add term CTNNA1-related diffuse gastric and lobular breast cancer syn\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6057 label: revise superclass of 'Cockayne syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6058 label: reclassify terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6059 label: revise xrefs on congenital myopathy 4A, autosomal dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/606 label: Merge request for RASopathy + Noonan Syndrome and Noonan-related Syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6060 label: revise xrefs for myopathies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6061 label: relabel GNPTG-mucolipidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6062 label: "add superclass to 'hepatic fibrosis-renal cysts-intellectual disabili\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6063 label: "add synonym to 'multiple congenital anomalies-hypotonia-seizures synd\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6064 label: obsolete gastric juice peptides - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6065 label: obsolete distal monosomy 20q - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6066 label: obsolete limbic encephalitis with neurexin-3 antibodies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6067 label: obsolete non-paraneoplastic limbic encephalitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6068 label: merge limbic encephalitis with NMDA receptor antibodies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6069 label: merge dyskinesia, limb and orofacial, infantile-onset - id: https://api.github.com/repos/monarch-initiative/mondo/issues/607 label: Mondo to genes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6070 label: merge spinocerebellar ataxia type 7 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6071 label: review allergy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6072 label: DO alignment (partial 230313) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6073 label: exclude children of progeroid syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6074 label: exclude subclasses of progeroid syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6075 label: "add consider to obsolete craniofacial dysplasia-short stature-ectoder\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6076 label: add superclass to 'microcephaly 1, primary, autosomal recessive' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6077 label: obsolete 'syndromic diaphragmatic or abdominal wall malformation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6078 label: 'split term: diaphragmatic malformation and abdominal wall malformation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6079 label: '[Obsolete] MONDO:0019765 celosomia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/608 label: FATTY LIVER DISEASE, NONALCOHOLIC, SUSCEPTIBILITY TO, 1 is not a disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6080 label: reclassify 'Werner syndrome' as a child of 'progeroid syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6081 label: Add "new" and "updated" mappings to the changelog - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6082 label: '[NTR/PAX5]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6083 label: 'New term: polygenic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6084 label: DO alignment (partial) - 230314 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6085 label: create DOS-DP patterns for non-human diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6086 label: add new term PAX5-related B lymphopenia and autism spectrum disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6087 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6088 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6089 label: Replace myself as PR creator by `GitHub-actions` when ontobot creates a PR - id: https://api.github.com/repos/monarch-initiative/mondo/issues/609 label: disease susceptibility should not be a subclass of disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6090 label: LSS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6091 label: Malaria ICD9 xref update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6092 label: '`mondo.sssom.config.yml` needs some updating' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6093 label: 'Added prefixes to config.yml ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6094 label: Add hpo xref to rheumatoid arthritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6095 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6096 label: add synonym to 'Leigh syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6097 label: add equiv to xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6098 label: add xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6099 label: Update OMIM_disease_series_by_gene.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/61 label: Resolve ZWS inconsistencies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/610 label: Can't load MONDO from PURL - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6100 label: merge salivary gland type cancer of the breast - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6101 label: Primrose syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6102 label: merge mitochondrial DNA depletion syndrome, hepatocerebral form - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6103 label: merged generalized isolated dystonia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6104 label: merge adenocarcinoma of penis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6105 label: merge osteoclastic giant cell tumor of pancreas - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6106 label: merge glomus jugulare neoplasm - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6107 label: create new terms hereditary capillary infantile hemangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6108 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6109 label: fix formatting in buik request - id: https://api.github.com/repos/monarch-initiative/mondo/issues/611 label: Non-simple property used in cardinality restriction - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6110 label: relabel MONDO:0100023 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6111 label: relabel MONDO:0009798 Primrose syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6112 label: add source to 'portosinusoidal vascular disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6113 label: reclassify terms that are incorrectly classified under syndromic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6114 label: exclude ordo is_a superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6115 label: '[Obsolete] MONDO:0020245 disease predisposing to age-related macular degeneration' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6116 label: review 'lymphoproliferative syndrome' and children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6117 label: '[Obsolete] MONDO:0019524 ''infantile Bartter syndrome with sensorineural deafness''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6118 label: exclude ORDO superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6119 label: OMIM mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/612 label: 'obsolete class: NEUROVISCERAL STORAGE DISEASE WITH CURVILINEAR BODIES ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6120 label: Change way the mondo ingest dependency is generated - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6121 label: update Ehrlichiosis branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6122 label: exclude ORDO superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6123 label: exclude ORDO superclasses - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6124 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6125 label: multiple congenital anomalies due to 14q32.2 imprinting defect[NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6126 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6127 label: multiple congenital anomalies due to 14q32.2 maternally expressed gene defect - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6128 label: obsolete familial lambdoid synostosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6129 label: multiple congenital anomalies due to 14q32.2 paternally expressed gene defect[NTR] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/613 label: Issue 612 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6130 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6131 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6132 label: add OMIMPS - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6133 label: add new OMIM + Orphanet terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6134 label: add info about our Feb workshop to Mondo website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6135 label: add OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6136 label: add new OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6137 label: add new omim terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6138 label: Typo error on MONDO:0800406 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6139 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/614 label: added new term MONDO_0100071, and reclassified terms as children - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6140 label: obsolete tags for April release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6141 label: Alignments 230330 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6142 label: Change hypertaurinuric cardiomyopathy to hypotaurinemic retinal degeneration and cardiomyopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6143 label: create new disease - test - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6144 label: create new disease - test - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6145 label: create a new 'new term request' template based on OBO foundry yaml file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6146 label: create add-term.yml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6147 label: Request for new term [GYG1-related disorder of glycogen metabolism] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6148 label: Request for new term [test] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6149 label: relabel ABCA4 retinoapthy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/615 label: 'added new term MONDO_0100072 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6150 label: reclassify cardiac terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6151 label: Protege setup documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6152 label: DO NOT MERGE nephrogenetic classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6153 label: add omim terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6154 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6155 label: Added --no-strict-clean-prefixes flag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6156 label: revise Peter's ID range - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6157 label: pseudohypoaldosteronism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6158 label: juvenile cataract-microcornea-renal glucosuria syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6159 label: "exclude subclass on 'juvenile cataract-microcornea-renal glucosuria s\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/616 label: 'NTR: episodic angioedema with eosinophilia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6160 label: normalization for release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6161 label: add OMIM terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6162 label: '[Obsolete] ''Mendelian syndromes with cleft lip/palate''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6163 label: 'CAMTA1 - Cerebellar dysfunction with variable cognitive and behavioral abnormalities ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6164 label: release 2023-04-04 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6165 label: release 2023-04-04 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6166 label: '[NTR/gene]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6167 label: Review rare disease list from NORD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6168 label: ABCA4 Retinopathy MONDO:0800406 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6169 label: 'Typo: NYX-related retinoapthy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/617 label: 'NTR: IgG4-related eosinophilic angiocentric fibrosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6170 label: 'Typo: TRPM1-related retinoapthy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6171 label: ABCA4 Retinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6172 label: revise inh kidney disease branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6173 label: '''Brody myopathy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6174 label: obsolete genetic hypertension - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6175 label: exclude superclasses - 'secondary glomerular disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6176 label: "add new term focal segmental glomerulosclerosisfocal segmental glomer\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6177 label: merge monosomy 7 myelodysplasia and leukemia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6178 label: reclassify terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6179 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/618 label: Cerebral cortical atrophy HP:0002120 feature of medullary cystic kidney disease? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6180 label: add source annotation to 'Brody myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6181 label: DO alignment 230410 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6182 label: "WIP add terms multiple congenital anomalies due to 14q32.2 paternall\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6183 label: MONDO:0033211 OMIMPS xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6184 label: add new term GYG1-related disorder of glycogen metabolism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6185 label: relabel hypotaurinemic retinal degeneration and cardiomyopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6186 label: Relabel term for BCL10 gene - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6187 label: merge autism susceptibility 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6188 label: "merge agonadism, 46,XY, with intellectual disability, short stature, \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6189 label: "relabel MONDO:0013886 cerebellar dysfunction with variable cognitive \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/619 label: New synonym- Viral Bronchiolitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6190 label: add term deficiency of adenosine deaminase 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6191 label: relabel ABCA4 Retinopathy MONDO:0800406 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6192 label: 'fix typo: NYX-related retinopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6193 label: Add hpo xref to dementia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6194 label: '`mapping_set_id` corrected' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6195 label: Request for new synonym [GDF2 related HHT-like syndrome] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6196 label: SMARCC1-associated Developmental Dysgenesis Syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6197 label: '[Merge] MONDO:0033211 ''diencephalic-mesencephalic junction dysplasia syndrome'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6198 label: Issues with MONDO:0100009 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6199 label: Request for new term [Microcephaly with or without short stature] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/62 label: "Need synonyms and text def for MONDO_0020467\tMosaic monosomy X" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/620 label: Multiple New Term Requests for MONDO-See Attachment - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6200 label: 'Merge based on OMIM: 600996 & 604772: MONDO:0010975 & [Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6201 label: MONDO:0010340 Asperger syndrome, X-linked, susceptibility to, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6202 label: 'ASVD3 : MONDO:0010859 & MONDO:0800268/MONDO:0020290 [Merge]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6203 label: MONDO:0008448 spheroid body myopathy; OMIM 182920 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6204 label: OMIM 300497 on MONDO:0010343 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6205 label: MONDO:0012279 &MONDO:0009690 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6206 label: add new ORDO terms (ORDO migration) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6207 label: add term inherited pseudohypoaldosteronism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6208 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6209 label: obsolete zoonosis terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/621 label: 'Ready to merge: Issue 620' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6210 label: revise xrefs on 'Asperger syndrome, X-linked, susceptibility to, 1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6211 label: revise xrefs on 'Asperger syndrome, X-linked, susceptibility to, 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6212 label: revise xref on 'spheroid body myopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6213 label: relabel SMARCC1-associated developmental dysgenesis syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6214 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6215 label: Delete .travis.yml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6216 label: Review leukoencephalopathy with vanishing white matter/CACH branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6217 label: added exclusion.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6218 label: add synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6219 label: add synonym to MONDO:0016779 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/622 label: Placement of some paralysis terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6220 label: revise def of diabetes mellitus sus terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6221 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6222 label: bug in mondo.json - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6223 label: Request for new term [syndromic complex neurodevelopmental disorder] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6224 label: 'HAND1 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6225 label: NKX2-5 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6226 label: MYH6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6227 label: '[Merge] Progeria with Progeroid Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6228 label: '[NDD/DEAF1]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6229 label: Make sure OBOgraphs json is using ROBOT - id: https://api.github.com/repos/monarch-initiative/mondo/issues/623 label: CBL-related disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6230 label: revise superclass - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6231 label: add new poisoning terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6232 label: merge testicular regression syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6233 label: obsolete familial lambdoid synostosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6234 label: merge Wolman disease with hypolipoproteinemia and acanthocytosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6235 label: added obsoletion candidate tags for May release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6236 label: Missing relationship KCNH2 - long QT syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6237 label: merge myopathy, centronuclear, 3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6238 label: add term microcephaly with or without short stature - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6239 label: '[Merge] ''myopathy, centronuclear, 1''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/624 label: Neurofibromatosis 1 parent term RASopathy, merge with neurofibromatosis-Noonan syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6240 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6241 label: pre-release normalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6242 label: term merged - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6243 label: release May 230501 - prepare - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6244 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6245 label: create rare disease slim - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6246 label: Remove cross-species-analog relation ship from Mondo release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6247 label: add equiv to to OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6248 label: Add QC checks to ensure that proxy merges from DO, OMIM and ORDO are documented - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6249 label: make injury preferred root - id: https://api.github.com/repos/monarch-initiative/mondo/issues/625 label: Legius syndrome under RASopathy/Noonan syndrome and Noonan-related Syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6250 label: Implement OMIM->common disease check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6251 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6252 label: ClinGen G6PD expert panel suggestion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6253 label: add OMIM xref + new ORDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6254 label: 'Proposal: add synonym ''intrauterine fetal demise (IUFD); intrauterine fetal death; stillbirth'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6255 label: 'Proposal: add synonym ''intrauterine fetal demise (IUFD); intrauterine fetal death; stillbirth'' for pregnancy disorder with abortive outcome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6256 label: 'Proposal: obsolete ''disease predisposing to age-related macular degeneration''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6257 label: 'Proposal: obsolete ''disease predisposing to age-related macular degeneration''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6258 label: review ehlrichiosis/anaplasmosis terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6259 label: Delete matches-to-nando.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/626 label: "Incorrect synonym of MONDO:0021166 \u2018inflammatory disease\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6260 label: '[Obsolete] LI-FRAUMENI SYNDROME 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6261 label: Update URL for ORCID to begin with https:// - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6262 label: Creating a subset list of MONDO terms which are relevant to drug repurposing. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6263 label: Tatton-Brown-Rahman overgrowth syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6264 label: added new DO x-ref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6265 label: Ontobot keeps running despite not the right template - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6266 label: add new term POLD1-related polyposis and colorectal cancer syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6267 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6268 label: 'relabel: CDH1-related diffuse gastric and lobular breast cancer syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6269 label: '[Obsolete] MONDO:0012233 Li Fraumeni Syndrome 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/627 label: 'Ready to merge: removed synonym from MONDO_0021166.' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6270 label: review susceptibility terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6271 label: Request for new term [Lissencephaly spectrum disorder with complex brainstem malformation] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6272 label: '[Revise subclass]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6273 label: add OMIA non-human animal disease with x-species analogs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6274 label: 'branch/alignment review: chromosomal abnormalities' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6275 label: updated QC check to include OMIA prefixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6276 label: xrefs for IgA glomerulonephritis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6277 label: terms obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6278 label: DO mapping 230519 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6279 label: Request for new term [SPAST-related motor disorder] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/628 label: Unusual syntax in some ICD10 database cross-references? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6280 label: OMIM 602477 & MONDO:0011231 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6281 label: MONDO:0024677 pancreatic insulinoma & MONDO:0005048 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6282 label: add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6283 label: Add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6284 label: "obsolete metachromatic leukodystrophy, adult-onset, with normal aryls\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6285 label: "add term lissencephaly spectrum disorder with complex brainstem malfo\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6286 label: relabel CDH1-related diffuse gastric and lobular breast cancer syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6287 label: relabel MONDO:0014382 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6288 label: revise defs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6289 label: MONDO:0011333 merge into MONDO:0014165[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/629 label: Ensure all rare OMIMs are classified under rare disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6290 label: revise OMIM xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6291 label: remove Equivalent Axiom for familial cutaneous melanoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6292 label: delete all the exact mondo xrefs from the Mondo release file - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6293 label: add gene - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6294 label: add term multiple congenital anomalies due to 14q32.2 imprinting defect - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6295 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6296 label: '[NTR] NKX2-1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6297 label: add obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6298 label: add synonym to Immunodeficiency 37 MONDO:0014491 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6299 label: TRAF3 Haploinsufficiency [NTR/gene] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/63 label: Need synonym for MONDO_0015779 45,X/46,XY mixed gonadal dysgenesis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/630 label: A useful source for definitions and synonyms for epidermolysis bullosa - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6300 label: reinstate salivary gland type cancer of the breast - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6301 label: reinstate mitochondrial DNA depletion syndrome, hepatocerebral form - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6302 label: '[Merge] merge ''hereditary capillary infantile hemangioma'' with ''capillary infantile hemangioma''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6303 label: add obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6304 label: HCM ICD-10 xref only linked to obstructive HCM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6305 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6306 label: normalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6307 label: 230601 release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6308 label: Update Changes.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6309 label: update release documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/631 label: Disease susceptibility no longer a subclass of disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6310 label: Align 5 missing decipher CNV syndromes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6311 label: Review requests for 7 Decipher mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6312 label: MONDO:0007779 autosomal dominant Opitz G/BBB syndrome[Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6313 label: revise superclasses that come from -obsoleted rewiring - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6314 label: obsolete Mendelian syndromes with cleft lip/palate - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6315 label: Update qc-permitted-properties.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6316 label: add QC check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6317 label: updated created_by with dc creator - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6318 label: Update a-protege-setup.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6319 label: add term TRAF3 haploinsufficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/632 label: 'revise label for Chitty Hall Web syndrome. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6320 label: update dc:creator - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6321 label: Sotos syndrome and children [Merge/rename] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6322 label: Create a QC pipeline that is more efficient for change requests - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6323 label: merge spheroid body myopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6324 label: relabel intellectual developmental disorder, autosomal recessive 74 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6325 label: Various Mondo fixes (creator, subsets) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6326 label: Update qc-permitted-properties.sparql - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6327 label: MONDO:0800342 cap myopathy 2 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6328 label: MONDO:0010250 & MONDO:0044618 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6329 label: MONDO:0032678 & MONDO:0034147 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/633 label: 'Revert "Ready to merge: Issue 528 - removed superclass from MONDO_0006044 nephrosclerosis"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6330 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6331 label: Do not create proxy merges when merging - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6332 label: Capitalisation rules for disease names - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6333 label: Dyadic approach to disease names - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6334 label: Osteosclerosis congenita is NOT a synonym for Achondroplasia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6335 label: MONDO:0011499 Okamoto & MONDO:0014700 Au-Klein[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6336 label: Update ORDO mapping obsolesence status - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6337 label: MONDO:0007543 enolase, sperm specific[Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6338 label: '[NTR/NOG]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6339 label: Add check for redundant "preferredExternal" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/634 label: Reasoning errors currently in the master branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6340 label: Update Deprecation status of OMIM, NCIT and DOID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6341 label: 'add mappings from UMLS, MESH, MEDDRA, NCIT for long COVID-19, MONDO:0100233 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6342 label: Skip UMLS mappings from SKOS generation pipeline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6343 label: Exclude UMLS mappings from mondo.sssom.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6344 label: Add pipeline for updating deprecated classes from external sources - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6345 label: Amend update_deprecated pipeline - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6347 label: Update GARD mappings (major) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6348 label: capitalize first letter - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6349 label: exclude syonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/635 label: 'Do not merge: fix reasoning errors ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6350 label: obsolete enolase, sperm specific - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6351 label: fix label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6352 label: add xrefs to Long COVID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6353 label: MONDO:0008658 virus Rd114 RNA Complementarity[Obsolete] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6354 label: obsolete virus Rd114 RNA Complementarity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6355 label: MONDO:0019082 "pemphigoid" alt name - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6356 label: Newer Orphanet-sourced terms mix[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6357 label: 'split term: Marie Unna hereditary hypotrichosis MONDO:0018631' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6358 label: DO mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6359 label: Update a-protege-setup.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/636 label: 'Reasoning error: infective arthritis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6360 label: review synonym ranges for 'GNE myopathy' and 'myopathy, distal, with rimmed vacuoles' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6361 label: ORDO migration - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6362 label: Add non-human animal disease high level classifications - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6363 label: Fetishism -> Fetishistic Disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6364 label: '[Obsolete]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6365 label: Create Translator UI subset of MONDO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6366 label: '[Obsolete] gender dysphoria' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6367 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6368 label: Microangiopathy and leukoencephalopathy, pontine, autosomal dominant[Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6369 label: '[Revise subclass] Malaria; Melanoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/637 label: 'Reasoning error: ''congenital intestinal disease due to an enzymatic defect''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6370 label: leukemia is a "musculoskeletal system disorder" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6371 label: Request for new term [Pythiosis] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6372 label: remove subclassOf axiom from leukemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6373 label: exclude superclass on melanoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6374 label: "add parent to 'muscular dystrophy-dystroglycanopathy (congenital with\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6375 label: merge arrhythmogenic right ventricular dysplasia 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6376 label: merge diencephalic-mesencephalic junction dysplasia syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6377 label: Concatenated Equivalent To statement - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6378 label: revise mapping for Cree leukoencephalopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6379 label: 'split term: ''lysosomal acid lipase deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/638 label: 'Reasoning error: maple bark strippers'' lung' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6380 label: Review terms on OMIM omit list in HPO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6381 label: genetic terms should be labeled as hereditary - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6382 label: obsolete myoclonic epilepsy, progressive, X-linked - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6383 label: obsolete allergy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6384 label: obsoleted muscle disorder terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6385 label: Deal with updates to IDs involved in proxy merges - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6386 label: Release specific proxy-merge SSSOM file and distribute to source ontologies - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6387 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6388 label: add new term SPAST-related motor disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6389 label: 'split out term: epilepsy, idiopathic generalized, susceptibility to, 17' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/639 label: 'Reasoning error: bacterial arthritis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6390 label: "add new term NKX2-1 related choreoathetosis and congenital hypothyroi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6391 label: '[Obsolete] MONDO:0017336 ''fatal infantile hypertrophic cardiomyopathy due to mitochondrial complex I deficiency''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6392 label: update ICD xref on hypertrophic cardiomyopathy (MONDO:0005045) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6393 label: add new term NOG-related symphalangism spectrum disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6394 label: exclude synonym on 'bullous pemphigoid' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6395 label: investigate 'skeletal muscle neoplasm/cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6396 label: 'WIP: split out hypotrichosis 4' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6397 label: add new term NOG-related symphalangism spectrum disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6398 label: split out term hypotrichosis 4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6399 label: revise labels to be hereditary - id: https://api.github.com/repos/monarch-initiative/mondo/issues/64 label: added synonym to MONDO_0015779 45,X/46,XY mixed gonadal dysgenesis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/640 label: Reasoning errors with UBERON and Food Ontology terms in MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6400 label: 'pending review: add term ''hereditary neurological disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6401 label: 'Change curie map for semapv: `# semapv: https://w3id.org/semapv/` => `# semapv: https://w3id.org/semapv/vocab/`' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6402 label: revise label fetishistic disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6403 label: create rare disease subset documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6404 label: review epilepsy classifcation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6405 label: 'WIP: review epilepsy classifications' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6406 label: '[Merge] MONDO:0035160 ''progressive myoclonic epilepsy with neuroserpin inclusion bodies''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6407 label: '[Obsolete] MONDO:0021927 ''arthrogryposis epileptic seizures migrational brain disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6408 label: Fix typo for MONDO:0016025 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6409 label: update mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/641 label: nonsyndromic oculocutaneous albinism - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6410 label: add term tracker - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6411 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6412 label: Regenerate MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6413 label: 'FAILED ATTEMPT: Regenerating MONDO with `boomer` results inclusion.' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6414 label: '[Revise subclass] Consider if adenoma of pancreas should be a subclass of adenoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6415 label: updated malaria axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6416 label: Create QC to limit rare disease to the human disease branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6417 label: review equivalent axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6418 label: review Equivalent for several terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6419 label: split 'bleeding diathesis due to thromboxane synthesis deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/642 label: nongoitrous euthyroid hyperthyrotropinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6420 label: remove susceptibility terms from "rare" subset - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6421 label: DO NOT MERGE until... create QC for susceptibility - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6422 label: Pipeline for british language synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6423 label: Add British synonyms to Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6424 label: Standardise, no, standardize all language in Mondo to American English - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6425 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6426 label: normalization for release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6427 label: release 2023 07 03 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6428 label: '[Revise logical def] Fragile X Syndrome disease has feature some Autism (HP term)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6429 label: 'GARD: Review "proxy merges"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/643 label: 'WIP: Issue 547' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6430 label: 'GARD: Decide on what to do with the 785 GARD ids which are mapped to obsolete Mondo IDs' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6431 label: 'GARD: Review 174 missing IDs' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6432 label: 'Bugfix: `deprecated_annotation_merging` goal' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6433 label: Update ontobot.yaml - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6434 label: familial long QT syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6435 label: Incorrect synonyms in MONDO_0009376 (carbamoyl phosphate synthetase I deficiency disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6436 label: Add an OAK command to mondo.Makefile for info on obsoletes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6437 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6438 label: Clarifying questions/X-refs; MONDO:0010173 and Mayer-Rokitansky-Kuster-Hauser syndrome(s) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6439 label: '[Revise subclass] Syndromic Complex Neurodevelopmental Disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/644 label: xref errors - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6440 label: Add term pythiosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6441 label: remove logical def for autoimmune-polyendocrinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6442 label: redux of mass obsoletion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6443 label: add new synonym - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6444 label: Update exact synonyms QC - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6445 label: MONDO:0011790 | Amish lethal microcephaly - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6446 label: '[NTR/PRKAG2] PRKAG2-related cardiomyopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6447 label: redux of mass obsoletion, v2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6448 label: Review "bearer of some rare" axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6449 label: NORD disease subset - id: https://api.github.com/repos/monarch-initiative/mondo/issues/645 label: 'ready to merge: issue-644' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6450 label: Updated the NORD subset rare disease list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6451 label: Mondo::GARD obsoletes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6452 label: '[Merge] MONDO:0015398 ''hemifacial microsomia''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6453 label: exclude supercalss - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6454 label: Added keywords to pandas function arguments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6455 label: Documenting exclusion reasons for non exact matches and getting rid of `mondoIsNarrowerThanSource` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6456 label: Goldberg-Shprintzen syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6457 label: merge hereditary capillary infantile hemangioma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6458 label: merge light fixation seizure syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6459 label: merge pancreatic insulinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/646 label: 'add synonym to ''oculocutaneous albinism''. Addresses # 641' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6460 label: '[Merge] DICER1 syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6461 label: New term request from NORD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6462 label: SMA - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6463 label: '[Obsolete] MONDO:0008807 ''apnea, central sleep''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6464 label: create AP for cross-species analog - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6465 label: add cross-species analog AP from axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6466 label: Extend OMIM check to look for ancestors rather than only direct parents - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6467 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6468 label: logical definitions to review for mass obsoletions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6469 label: revise subclass for subacute sclerosing panencephalitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/647 label: Issue 641 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6470 label: Exclude superclass b - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6471 label: '[Obsolete] ''congenital absence/hypoplasia of fingers excluding thumb, bilateral''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6472 label: '[Obsolete] ''congenital absence/hypoplasia of thumb, bilateral''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6473 label: change name for MONDO:0015265 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6474 label: Added subclass to 'avian leukosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6475 label: Cushing syndrome classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6476 label: Add OMIA non-human animal disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6477 label: Issue 6464 taxonspecific - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6478 label: add xref to KIF1A - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6479 label: remove obs tag - id: https://api.github.com/repos/monarch-initiative/mondo/issues/648 label: Obsoletion of rare-X classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6480 label: remove subclass axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6481 label: obsolete hyperlipoproteinemia type IV - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6482 label: merge congenital myopathy with excess of thin filaments - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6483 label: obsolete Li-Fraumeni syndrome 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6484 label: merge myopathy, myosin storage, autosomal dominant - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6485 label: add OMIMPS:151623 to excluded list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6486 label: obsolete celosomia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6487 label: obsolete atrioventricular septal defect 3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6488 label: update Decipher mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6489 label: merge congenital muscular dystrophy merosin-positive - id: https://api.github.com/repos/monarch-initiative/mondo/issues/649 label: polyostotic fibrous dysplasia unsatsifiable - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6490 label: a xref ID to MedDRA is a UMLS ID - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6491 label: Add GARD to proxy merge QC check - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6492 label: Request for new term [ADD NAME HERE] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6493 label: Request for new term [ADD NAME HERE] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6494 label: add ORCID to mappings - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6495 label: fix consider - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6496 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6497 label: TCF7L2-Related Neurodevelopmental Disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6498 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6499 label: '[Merge] MONDO:0009453 ''immune deficiency disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/65 label: added synonym to MONDO_0020467 Mosaic monosomy X - id: https://api.github.com/repos/monarch-initiative/mondo/issues/650 label: 'add superclass assertion to ''Legius syndrome''. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6501 label: create an SOP to maintain rare disease list from GARD and NORD - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6502 label: '[Revise text def]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6503 label: fix repalced by - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6504 label: revise def - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6505 label: '[Merge] MONDO:0016725 ''pineal parenchymal tumor of intermediate differenciation''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6506 label: Rare subset revision - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6507 label: add term tracker item - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6508 label: 'NTR: Head Injury' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6509 label: 'NTR: Head Injury' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/651 label: 'Ready to merge - added dbxrefs back to obsoleted term. Addresses #327' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6510 label: Request for new term Oral Fibroma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6511 label: Request for new term Oral Fibroma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6512 label: Request for new term Non-verbal learning disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6513 label: Request for new term Non-verbal learning disability - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6514 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6515 label: Review the classification of "cancer predisposition" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6516 label: add obs tags to ORDO mass obsoletion candidates (round 1) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6517 label: add obsoletion tag for August release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6518 label: 'split term: Birt-Hogg-Dube syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6519 label: add obs tag to Birt-Hogg-Dube syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/652 label: Revise classification of MONDO:0044013 'puerperal disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6520 label: Draft fix to standardise obsolesence reasons - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6521 label: August 2023 release - normalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6522 label: Update mondo-edit.obo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6523 label: Create QC check to catch cross-species analog error - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6524 label: update nord-rare-disease.tsv - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6525 label: Update set-up-docker.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6526 label: update nord subset (again) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6527 label: release 2023-08-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6528 label: Add QC check for cross species analog diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6529 label: fix capitalization - id: https://api.github.com/repos/monarch-initiative/mondo/issues/653 label: Infection and inflammation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6530 label: update setting ID range - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6531 label: 'split term: ''intellectual disability-macrocephaly-hypotonia-behavioral abnormalities syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6532 label: remove obs tags from syndromic constitutional thrombocytopenia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6533 label: "Review the high level classification of \u2018cancer or benign tumor\u2019\ \ and \u2018neoplastic disease or syndrome\u2019" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6534 label: erythrokeratoderma variabilis (et) progressivaMONDO:0017681 or MONDO:0017851 [Merge] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6535 label: Add OMIA non-human animal diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6536 label: ICD10 subset of MONDO? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6537 label: DONT MERGE! Harshad check this :) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6538 label: Mondo Diff reports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6539 label: add def - id: https://api.github.com/repos/monarch-initiative/mondo/issues/654 label: Issue with food allergies linked to 'infectious disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6540 label: add obs tags - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6541 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6542 label: added Mondo_rare subset - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6543 label: 'documentation: rare disease subset curation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6544 label: We need a page that says which release artifact is right for me? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6545 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6546 label: Request for new term [Birt-Hogg-Dube syndrome 2] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6547 label: 'Create SOP to remove terms from the obsoletion candidate list. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6548 label: add new term Acid Ceramidase Deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6549 label: Make sure GARD and NORD mappings are exported to SSSOM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/655 label: Request to expand the definition of DOORS syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6550 label: '[Revise logical def] ''monogenic epilepsy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6551 label: Update DOSDP and SPARQL docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6552 label: Add British synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6553 label: Update BE synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6554 label: Request for new term [self-limited neonatal seizures ] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6555 label: Request for new term [self-limited neonatal seizures ] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6556 label: infantile epilepsy syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6557 label: merged 'human anaplasmosis' to 'anaplasmosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6558 label: Are "Human granulocytic anaplasmosis (HGA)" and "anaplasmosis" the same disease? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6559 label: Trigeminal trophic syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/656 label: remove superclass from MONDO_0014857 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6560 label: MedGen conflicts - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6561 label: 'split term: Oculopharyngeal muscular dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6562 label: ClinGen gene-based retinopathy terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6563 label: Update "remove a term from the obsoletion list" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6564 label: 'DO NOT MERGE: refactoring endocrine system' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6565 label: Deoxyhypusine synthase disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6566 label: mass obsolete children of endocrine system disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6567 label: '[Obsolete] MONDO:0018665 ''X-linked acrogigantism due to a point mutation''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6568 label: merge 'human anaplasmosis' to 'anaplasmosis' + update obsoletion of rare disease documentation - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6569 label: Add obsoletion pipeline sparql queries - id: https://api.github.com/repos/monarch-initiative/mondo/issues/657 label: issue with build timing out - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6570 label: add term TCF7L2-related neurodevelopmental disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6571 label: obsolete autosomal dominant Opitz G/BBB syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6572 label: postpone obsoletion of ATR-X related syndrome (MONDO:0016980) and KAT6B-realted multiple congenital anomalies syndrome (MONDO:0036042) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6573 label: Remove places where UMLS:CN was used as evidence - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6574 label: merge neonatal epileptic encephalopathy due to glutaminase deficiency - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6575 label: OMIA Non-Human Animal Diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6576 label: merge CLCN4-related X-linked intellectual disability syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6577 label: '[Merge] MONDO:0100282 ''SC phocomelia syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6578 label: add ORCID to unsupported axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6579 label: actinobacillosis has unsupported subclassOf axioms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/658 label: 'Do not merge: testing travis ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6580 label: add source to subclassof axiom - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6581 label: split leukoencephalopathy with vanishing white matter - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6582 label: add term Birt-Hogg-Dube syndrome 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6583 label: Added scheduled workflow for getting merged unmapped exact lexmatches. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6584 label: add ORCID as source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6585 label: Obsolete "gender identity disorder" terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6586 label: obsoleted "gender dysphoria" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6587 label: update obsoletion document - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6588 label: revise comment for MONDO:0100516 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6589 label: Update curation-workflow-overview.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/659 label: 'add synonym to MONDO_0043726. Closes #263' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6590 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6591 label: Weekly automated mappings update - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6592 label: '[xref] MONDO:0005823 legionellosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6593 label: redefine disease entity in Mondo FAQ - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6594 label: clean up female infertility branch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6595 label: Request to include xrefs from Mondo to ClinGen - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6596 label: Exercise for ICBO 2023 workshop - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6597 label: 'New OMIM data and existing Mondo record: ACTB-ASSOCIATED SYNDROMIC THROMBOCYTOPENIA' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6598 label: updated label for MONDO:0012280 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6599 label: SETD2-related neurodevelopmental disorder without or with macrocephaly/overgrowth - id: https://api.github.com/repos/monarch-initiative/mondo/issues/66 label: Creation of broader disease entity for MED12 related disorder(s) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/660 label: 'obsolete Conjunctival disorder (MONDO_0006170). Closes #567' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6600 label: GNB1-related neurodevelopmental disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6601 label: added omia terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6602 label: non-human omia disease 1 out of 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6603 label: non-human omia disease 2 out of 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6604 label: non-human omia disease 3 out of 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6605 label: non-human omia disease 4 out of 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6606 label: non-human omia disease 5 out of 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6607 label: non-human omia disease 6 out of 6 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6608 label: Need to refresh imports before release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6609 label: updated imports - id: https://api.github.com/repos/monarch-initiative/mondo/issues/661 label: Issue 505 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6610 label: Added non-human OMIA terms - 230831-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6611 label: add omia terms - 230901-01 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6612 label: Pure Mondo normalisation PR - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6613 label: Fix logical definition of MONDO:0015627 ('multiple epiphyseal dysplasia due to collagen 9 anomaly') - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6614 label: Migrate Mondo to ODK - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6615 label: updated the logical definition for MONDO:0015627 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/6616 label: Added new OMIA terms (230901) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/662 label: review rare diseases in Tudor's spreadsheet - id: https://api.github.com/repos/monarch-initiative/mondo/issues/663 label: ' issue #662' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/664 label: 'Ready to merge: revised superclass for MONDO_0022020. addresses #514' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/665 label: New term template - id: https://api.github.com/repos/monarch-initiative/mondo/issues/666 label: 'remove subclass: muscular disease classified as skeletal disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/667 label: Consider mass removal of many ORDO grouping classes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/668 label: Cjm fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/669 label: Request for change in the title/description for MONDO:0013579 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/67 label: Issue 62 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/670 label: Request for change in the title/description for MONDO:0009603 (HIBCH) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/671 label: 'New design pattern: refactory' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/672 label: Refractory design pattern - id: https://api.github.com/repos/monarch-initiative/mondo/issues/673 label: 'new term request: resistant hypertension' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/674 label: 'un-obsoleted ''monogenic diabetes''. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/675 label: merge Leigh syndrome with parent - id: https://api.github.com/repos/monarch-initiative/mondo/issues/676 label: Update issue templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/677 label: Update issue templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/678 label: Update issue templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/679 label: Update issue templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/68 label: 'added synonym to MONDO_0015779, addresses #63' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/680 label: Update issue templates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/681 label: Migrating build to Jenkins - id: https://api.github.com/repos/monarch-initiative/mondo/issues/682 label: Fix invalid ISBN of `NORD Guide to Rare Disorders` - id: https://api.github.com/repos/monarch-initiative/mondo/issues/683 label: Jenkins build - id: https://api.github.com/repos/monarch-initiative/mondo/issues/684 label: Jenkins build - id: https://api.github.com/repos/monarch-initiative/mondo/issues/685 label: Consider annotation prop to distinguish disease grouping class vs disease entity - id: https://api.github.com/repos/monarch-initiative/mondo/issues/686 label: '[NTR] IRIS: IMMUNE RECONSTITUTION INFLAMMATORY SYNDROME' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/687 label: Jenkins setup with JSON escaping fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/688 label: 'Add new term MONDO_0300000 SSR3-CDG, closes #479' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/689 label: Rearrange top level of MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/69 label: Define design pattern for definitions of n-of-1 cases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/690 label: 'question: where to add ORCIDs in Protege?' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/691 label: dummy change - id: https://api.github.com/repos/monarch-initiative/mondo/issues/692 label: '[Revise logical def]' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/693 label: relabel MONDO_0009603 and relabel MONDO_0013579 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/694 label: 'NTR: Juvenile Idiopathic Scoliosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/695 label: 'add new term MONDO_0100076 ''juvenile idiopathic scoliosis''. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/696 label: Brooks Wisniewski Brown syndrome and MENTAL RETARDATION, X-LINKED, SYNDROMIC, TURNER TYPE; MRXST - id: https://api.github.com/repos/monarch-initiative/mondo/issues/697 label: Typo in ID for 'pulmonary branch stenosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/698 label: Typo in MONDO_0006120 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/699 label: review susceptibility terms in Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/7 label: Consider additional sources for chromosomal rearrangement diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/70 label: "ensure that all of the \u201Cnew\u201D cardiac diseases get added to MONDO " - id: https://api.github.com/repos/monarch-initiative/mondo/issues/700 label: 'fix typo. Closes #698' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/701 label: Fix overly broad logical definitions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/702 label: 'WIP: issue 701' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/703 label: finished reviewing doid-proxy-merge_2018-10-15 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/704 label: Check is-a relationships that are supported only by a single source - id: https://api.github.com/repos/monarch-initiative/mondo/issues/705 label: Revise label of MONDO:0005259 'Asperger syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/706 label: '[NTR] cerebellar medulloblastoma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/707 label: 'question: MONDO:0008458 spinocerebellar ataxia type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/708 label: "Revise synonym for MONDO:0009054\tautosomal recessive cutis laxa type 2,\ \ classic type" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/709 label: 'question: retinal dystrophy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/71 label: Perennial misspelled in synonym for Allergic Rhinitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/710 label: '[Obsolete] pancreatic insufficiency, combined exocrine' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/711 label: 'MHC class II deficiency: SCID or non-Severe CID' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/712 label: Fixing "Prototype" cases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/713 label: 'split term: Noonan syndrome with multiple lentigines' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/714 label: Pre release - id: https://api.github.com/repos/monarch-initiative/mondo/issues/715 label: 'Draft: Mondo editors guide in ReadTheDocs' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/716 label: diseases should not be at root level - id: https://api.github.com/repos/monarch-initiative/mondo/issues/717 label: '[Revise text def] MONDO:0021166 ''inflammatory disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/718 label: 'update definition for ''inflammatory disease''. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/719 label: '#716- revise classification of terms under ''disease or disorder''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/72 label: 'edited synonym for MONDO:0011786. addresses #71' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/720 label: 'Issue 708 removed synonym from MONDO:0009054 and added it to MONDO_0013751. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/721 label: 'Remove travis changes: Issue 623' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/722 label: '[Obsolete] monogenic disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/723 label: '[Revise subclass] Review sexual disorder classification' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/724 label: '[NTR] Ornithine aminotransferase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/725 label: Typo in MONDO:0002149 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/726 label: Please check top hierarchy in MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/727 label: 'fixed typo in MONDO:0002149. Closes #725' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/728 label: add new term MONDO_0100077 'ornithine aminotransferase deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/729 label: Duplicate terms for familial hypercholesterolemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/73 label: Fix definition for MONDO_0017215 calciphylaxis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/730 label: 'obsolete MONDO_0007750. Closes #729' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/731 label: 'Close this: add xref to MONDO_0021060 RASopathy' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/732 label: Add a QC check to prevent OMIM SubClassOf OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/733 label: 'add new term MONDO_0100078 ''resistant hypertension''. closes #673' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/734 label: HIV is a subClass of cancer?! - id: https://api.github.com/repos/monarch-initiative/mondo/issues/735 label: Change term for MONDO:0009607 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/736 label: Add link to Mondo logo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/737 label: 'Do not merge: add mondo-logos folder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/738 label: 'Ready to merge: remove comment, closes #82' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/739 label: MONDO:0018214 [Revise subclass] - id: https://api.github.com/repos/monarch-initiative/mondo/issues/74 label: Updating relationships:Metabolic acidosis/Lactic acidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/740 label: DO NOT MERGE Update Makefile to test travis timeout - id: https://api.github.com/repos/monarch-initiative/mondo/issues/741 label: check results of 254 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/742 label: Installing jq makes whole travis job file prematurely - id: https://api.github.com/repos/monarch-initiative/mondo/issues/743 label: Mondo build exceeds 50 minute hard limit of Travis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/744 label: 'Fixing Travis build failure, closes #742' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/745 label: Dravet syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/746 label: should PS607634 be connected to multiple MONDO records? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/747 label: '[Revise subclass] eye disease and nervous system disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/748 label: create a simplified OWL version of mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/749 label: MONDO:0005046 'immune system disease' has exact synonym 'immune system disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/75 label: surgical diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/750 label: MONDO:0005550 infectious disease has (very) ambiguous synonyms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/751 label: revise synonyms for MONDO_0005550 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/752 label: revise superclass for 'Dravet syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/753 label: OMIM Phenoseries not captured - id: https://api.github.com/repos/monarch-initiative/mondo/issues/754 label: '[Revise subclass] Bardet Biedl syndrome 1 is not a subclass of BBS 16 ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/755 label: 'removed xref on ''osteopetrosis (disease)''. Closes #746' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/756 label: Meier-Gorlin syndrome 7; MGORS7 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/757 label: "add new term MONDO:0100079 and add subclass relation to MONDO:0011794\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/758 label: 'revise label for MONDO:0009607. Closes #735' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/759 label: Mondo website updates - id: https://api.github.com/repos/monarch-initiative/mondo/issues/76 label: Check ED classification - id: https://api.github.com/repos/monarch-initiative/mondo/issues/760 label: EDS2 update Orphanet xrefs, and sort out confusion between two classic types - id: https://api.github.com/repos/monarch-initiative/mondo/issues/761 label: Check ontology against a whielist of OWL annotation properties - id: https://api.github.com/repos/monarch-initiative/mondo/issues/762 label: Add a new template for xref fixes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/763 label: GARD xref for CAMFAK is wrong - id: https://api.github.com/repos/monarch-initiative/mondo/issues/764 label: 'WIP: Various' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/765 label: 'rename term MONDO:0011581. addresses #577' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/766 label: 'add new term MONDO:0100079 cardioectodermal syndrome. Closes #577' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/767 label: Check placement of Orphanet:508512 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/768 label: Who is Anonymous-33? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/769 label: '[NTR] Small Intestinal Bacterial Overgrowth' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/77 label: 'Review: Kallman syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/770 label: '[NTR] Refeeding Syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/771 label: '[NTR] Calcium-alkali syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/772 label: '[NTR] Skeletal fluorosis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/773 label: '[NTR] Phrynoderma' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/774 label: Issue 750c - id: https://api.github.com/repos/monarch-initiative/mondo/issues/775 label: 'Travis passed: add source to xref for MONDO_0021060. Closes #606' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/776 label: 'renamed MONDO_0013308, added text def, revised superclass. Closes #623' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/777 label: EFO xref for MONDO:0005590 breast ductal adenocarcinoma - id: https://api.github.com/repos/monarch-initiative/mondo/issues/778 label: Update mondo-idranges.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/779 label: 'travis passed: ntr small intestinal bacterial overgrowth issue #769' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/78 label: Mapping GARDs from rare list - id: https://api.github.com/repos/monarch-initiative/mondo/issues/780 label: 'travis passed: ntr phrynoderma issue #773' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/781 label: 'ntr calcium-alkali syndrome issue #771' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/782 label: 'ntr skeletal fluorosis issue #772' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/783 label: remove COHD xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/784 label: 'change dbxref for synonym for MONDO_0011581. Addresses #577' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/785 label: 'remove synonym to obsoleted EFO term. Addresses #777' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/786 label: 'change synonyms from exact to broad for MONDO_0005590. Addresses #777' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/787 label: 'revise superclass for MONDO:0018214. Addresses #739' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/788 label: "revised equiv axioms for 'abdominal tuberculosis', 'eye allergy' and \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/789 label: "travis passed: add new term MONDO:0100080 sleep disorder and move insomnia\ \ (disease)\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/79 label: Add defs+references for newly added rare disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/790 label: 'add new term MONDO:0100081 cerebellular medulloblastoma, closes # 706' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/791 label: 'revise def of MONDO:0009079, addresses #655' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/792 label: 'add new term MONDO_0100082 LEOPARD syndrome 1, addresses #713' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/793 label: 'ntr refeeding syndrome issue #770' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/794 label: "add sublcassOf to Noonan syndrome and remove subclassOf, add excluded\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/795 label: 'add back dbxef and mark equivalentObsolete for MONDO_0005590. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/797 label: add annotation to synonym for MONDO_0001071 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/798 label: "remove superclass assertion for 'sensory system disease'. Addresses \u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/799 label: 'remove duplicate synonym from ''immune system disease''. Addresses #749' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/8 label: Remove incorrect xref for HIV infection - id: https://api.github.com/repos/monarch-initiative/mondo/issues/80 label: MONDO_0021937 Asrar Facharzt Haque syndrome is the same as MONDO_0011273 'H syndrome'? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/800 label: fix ICD10 xref on isolated agammaglobulinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/801 label: '[NTR] CONDSIAS' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/802 label: fix ACLSD UMLS xref - id: https://api.github.com/repos/monarch-initiative/mondo/issues/803 label: 'revised xref for MONDO:0014420. Closes #802' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/804 label: Conflicting IRIs for OMIM identifiers - id: https://api.github.com/repos/monarch-initiative/mondo/issues/805 label: is_a link to alt_id - id: https://api.github.com/repos/monarch-initiative/mondo/issues/806 label: Non-numeric term id - id: https://api.github.com/repos/monarch-initiative/mondo/issues/807 label: alt_id to non-mondo term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/808 label: Fix robot report errors - id: https://api.github.com/repos/monarch-initiative/mondo/issues/809 label: merge brucellosis, bovine + Brucella abortus brucellosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/81 label: '[WIP] added definitions to terms' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/810 label: Fixes for alt id and other weird id issues - id: https://api.github.com/repos/monarch-initiative/mondo/issues/811 label: '[Obsolete] Syndrome due to FAR1 deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/812 label: "Travis passed: update defs for methylmalonic aciduria and homocystinuria\ \ type cblF [\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/813 label: 'revise defs for Usher syndrome terms. Addresses #808' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/814 label: "Travis passed: update text def for angle-closure glaucoma [MONDO:0001744]\ \ and primar\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/815 label: 'Travis passed: revise def for MONDO:0004471 bacterial arthritis. Addresses #808' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/816 label: '[Obsolete] MONDO_0009651 ''pseudo-Hurler polydystrophy''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/817 label: '[Obsolete] MONDO_0009639 ''mitochondrial myopathy with lactic acidosis''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/818 label: 'Travis passed: revise defs for Stickler syndrome type 2 and 3. addresses #808' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/819 label: 'add new def for MONDO:0006614. addresses #808' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/82 label: Pls. remove comment from MONDO:0005441 otitis media (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/820 label: 'add label to MONDO:0003750; addresses #808' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/821 label: '[Revise subclass] MONDO:0019303 ''premature aging'' and children' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/822 label: Propagation of phenotype to diseases such as pneumonia is CONFUSING - id: https://api.github.com/repos/monarch-initiative/mondo/issues/823 label: '[Revise subclass] MONDO:0001165 ''tongue disease'' subclass of ''sensory system disease''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/824 label: '[Revise subclass] MONDO:0008608 down syndrome subclass of many' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/825 label: '[Revise subclass] hepatitis terms children of MONDO:0024294 skin disease caused by infection' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/826 label: Patch foodon unsat - id: https://api.github.com/repos/monarch-initiative/mondo/issues/827 label: Update Makefile to reinstate Foodon import (read) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/828 label: Update foodon_import.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/829 label: equivalentTo vs skos:exactMatch - id: https://api.github.com/repos/monarch-initiative/mondo/issues/83 label: ' Klippel-Trenaunay syndrome vs angioosteohypertrophic syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/830 label: delete whitespace - id: https://api.github.com/repos/monarch-initiative/mondo/issues/831 label: 'revise label for MONDO:0008608. Addresses #824' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/832 label: 'remove superclasses for MONDO:0008608 down syndrome. Addresses #824' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/833 label: "revise subclass for MONDO_0005413 cystic fibrosis associated meconium\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/834 label: Review the only-ordo supported is-as relationships? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/835 label: "revise subclass assertions for hepatisis terms and relabel terms. Add\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/836 label: Duplicate Merge ancylostomiasis/ankylostomiasis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/837 label: 'revise superclass assertions for down syndrome. Addresses #824' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/838 label: revise ID for 'sleep disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/839 label: need to fix IDs for cardioectodermal syndrome and sleep disorder - id: https://api.github.com/repos/monarch-initiative/mondo/issues/84 label: 'proposed merge: hereditary breast ovarian cancer' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/840 label: Add Jenkins status icon and add plain branch name parameter - id: https://api.github.com/repos/monarch-initiative/mondo/issues/841 label: Some xrefs map to multiple mondo terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/842 label: Merge filarial elephantiasis (MONDO:0005761) and lymphatic filariasis (MONDO:0016076) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/843 label: 'update def for MONDO:0016076. addresses #842' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/844 label: "delete SubClassOf assertion 'disease has location' some 'hepatobiliar\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/845 label: "add deprecated annotation to synonyms of 'intellectual disability, au\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/846 label: "remove HP_0000010 'Recurrent urinary tract infections' as a dbxref fr\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/847 label: Merge and obsolete one of two vCJD terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/848 label: "move MONDO:0001650 'acute cystitis (disease)' to a child of MONDO:000\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/849 label: "remove HP: 0001941 as an dbxef to MONDO:0041261 'disorder of acid-bas\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/85 label: 'To do: add more metadata on obsolete terms in MONDO' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/850 label: 'revise text def for ''subcorneal pustular dermatosis''. Addresses #808' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/851 label: 'revise parent for ''premature aging''. Addresses #821' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/852 label: 'add superclasses and def for acrogeria. Addresses #821' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/853 label: 'revise parents and def for De Barsy syndrome. Addresses #821' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/854 label: 'revise superclasses for Flynn-Aird syndrome. Addresses #821' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/855 label: 'revise superclasses for ''Hallermann-Streiff syndrome''. addresses #821' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/856 label: "add superclass and def for LMNA-related cardiocutaneous progeria synd\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/857 label: 'fix typo in MONDO:0015333. Addresses #821' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/858 label: '[Revise subclass] MONDO:0017709 disorder of lipid absorption and transport' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/859 label: '[Revise subclass] MONDO:0009833 Shwachman-Diamond syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/86 label: "\u2018enlarged vestibular aqueduct\u2019 (DOID:0050332) is not xref'd in\ \ MONDO" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/860 label: Representation of responses to drugs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/861 label: Should there be a design pattern for genetic disorders vs. unspecified? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/862 label: MONDO_0009290, glycogen storage disease II - id: https://api.github.com/repos/monarch-initiative/mondo/issues/863 label: '[Revise text def] MONDO:0011071 "hereditary thrombocytopenia with normal platelets and hematologic cancer predisposition syndrome"' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/864 label: '[NTR] hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/865 label: 'obsolete MONDO:0005409 variant Creutzfeld Jacob disease. Closes #847' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/866 label: '[Revise subclass] ''insomnia (disease)''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/867 label: Issue 866 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/868 label: 'revise labels for hepatitis infection terms. Addresses #825' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/869 label: 'revise label, def and synonyms for MONDO_0011071. Closes #863' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/87 label: Incorrect inferences arising from generic relations with insufficient buffering - id: https://api.github.com/repos/monarch-initiative/mondo/issues/870 label: MONDO:0012495, incorrect rendering of label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/871 label: 'help needed: huge diffs in Mondo' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/872 label: fix typo in MONDO:0012495 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/873 label: incorrect rendering of labels - id: https://api.github.com/repos/monarch-initiative/mondo/issues/874 label: 'fix typos. close #873' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/875 label: Typo in label of MONDO:0060702 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/876 label: Add analysis.md to docs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/877 label: Revise or obsolete seeming duplicates for Haemophilus meningitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/878 label: Update TSV artifact and analysis.md - id: https://api.github.com/repos/monarch-initiative/mondo/issues/879 label: Potential cdc url xrefs and NTRs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/88 label: Ready to merge- added defs to gard subset terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/880 label: MONDO:0022314 and MONDO:0016290, Hern OR Hernandez Aguirre-Negrete syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/881 label: create a table of Mondo source data for website - id: https://api.github.com/repos/monarch-initiative/mondo/issues/882 label: 'revise logical def of ''cystic fibrosis associated meconium ileum''. ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/883 label: Typo in description of reading disorder (MONDO_0001697) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/884 label: typo in synonym for MONDO_0010643 'acute leukemia (disease)'? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/885 label: '[Revise subclass] MONDO_0019395 ''Hinman syndrome''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/886 label: Sucrose Intolerance Disease xref proposal - id: https://api.github.com/repos/monarch-initiative/mondo/issues/887 label: Please revise label of MONDO:0012657 'MGS' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/888 label: "obsoleting generic sucrose intolerance (a phenotype), fixes #886. Axi\u2026" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/889 label: Should all obsoleted terms have labels? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/89 label: Check gard-derived syns - id: https://api.github.com/repos/monarch-initiative/mondo/issues/890 label: All classes must have a primary label - id: https://api.github.com/repos/monarch-initiative/mondo/issues/891 label: 'Fixed id typo , see #890' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/892 label: MONDO_0020420 is neither node nor property - id: https://api.github.com/repos/monarch-initiative/mondo/issues/893 label: http://purl.obolibrary.org/obo/mondo#DEPRECATED - id: https://api.github.com/repos/monarch-initiative/mondo/issues/894 label: ICD10CQ87.3 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/895 label: Bad xref for Mondo term chorioamnionitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/896 label: ' introducing mini change to normalise OWLAPI serialisation' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/897 label: Duplicate "nodes" element in JSON serializtion - id: https://api.github.com/repos/monarch-initiative/mondo/issues/898 label: need to relink the excludedSubclassOf to appropriate Mondo class for which the link was removed - id: https://api.github.com/repos/monarch-initiative/mondo/issues/899 label: '[NTR] ''cancer of long bone of upper limb''' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/9 label: issues with HIV-1 infection mapping - id: https://api.github.com/repos/monarch-initiative/mondo/issues/90 label: '[WIP] Bringing back omia' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/900 label: Creation of broader disease entity for ACTA1 related disorder(s) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/901 label: '[Revise subclass] for MONDO:0100080 Cardioectodermal syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/902 label: 'Weird AnnotationAssertion in owlaxioms: section of OBO file' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/903 label: Removes rogue annotation assertion from axiom header - id: https://api.github.com/repos/monarch-initiative/mondo/issues/904 label: xref on endotheliitis uses a URI, causing bad expansion in owl format - id: https://api.github.com/repos/monarch-initiative/mondo/issues/905 label: Odd, doubled URIs on classes in mondo.owl - id: https://api.github.com/repos/monarch-initiative/mondo/issues/906 label: is MONDO:0000171 equivalent to MONDO:0019523 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/907 label: 'Fixes gene URI issues fixes #905 also normalizes' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/908 label: '[Revise subclass] Issues with some descendants of MONDO:0005429 prion disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/909 label: '[Revise subclass] Geotrichosis should not be a child of immune system disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/91 label: Review class EHLERS-DANLOS SYNDROME, BEASLEY-COHEN TYPE - id: https://api.github.com/repos/monarch-initiative/mondo/issues/910 label: fixed casing - id: https://api.github.com/repos/monarch-initiative/mondo/issues/911 label: Quick check ids xrefs - id: https://api.github.com/repos/monarch-initiative/mondo/issues/912 label: "[Revise subclass] Questions re: subclasses of X-linked syndromic intellectual\ \ disability\t" - id: https://api.github.com/repos/monarch-initiative/mondo/issues/913 label: return to Marfan 2 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/914 label: 'DO NOT MERGE: update synonym for MONDO_0011906' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/915 label: add term replaced by annotation to 'obsolete Marfan syndrome type 2' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/916 label: remove subclass of assertioin for MONDO_0005772 (geotrichosis) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/917 label: fix issues with prion disease terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/918 label: remove incorrect xrefs and synonyms from endotheliitis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/919 label: add new term MONDO:0100084 actinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/92 label: Reclassify EDS in MONDO - id: https://api.github.com/repos/monarch-initiative/mondo/issues/920 label: add new term MONDO:0100085 cancer of long bone of upper limb - id: https://api.github.com/repos/monarch-initiative/mondo/issues/921 label: GARD xref for Alzheimer - id: https://api.github.com/repos/monarch-initiative/mondo/issues/922 label: '[Revise subclass] radiation or chemically induced disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/923 label: Change Mondo Title. - id: https://api.github.com/repos/monarch-initiative/mondo/issues/924 label: '[Revise subclass] MONDO:0005305 epistaxis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/925 label: missing colon (:) in xref mondo.obo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/926 label: '[Revise subclass] MONDO:0001071 intellectual disability' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/927 label: Failure to access previous MONDO owl versions using versionIRI - id: https://api.github.com/repos/monarch-initiative/mondo/issues/928 label: Create proper tag for last release, to fix PURL resolution problem - id: https://api.github.com/repos/monarch-initiative/mondo/issues/929 label: remove subclassof assertions - id: https://api.github.com/repos/monarch-initiative/mondo/issues/93 label: update synonyms and def for MONDO:0020066 'Ehlers-Danlos syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/930 label: remove superclass assertions for MONDO:0009169 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/931 label: remove dbxref from MONDO_0009290 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/932 label: update synonyms for MONDO:0060702 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/933 label: obsolete MONDO:0019184 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/934 label: obsolete class MONDO:0004823 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/935 label: obsoleted drug response terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/936 label: Mondo release request - id: https://api.github.com/repos/monarch-initiative/mondo/issues/937 label: Issue 685 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/938 label: revise subclass assertions for MONDO:0009833 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/939 label: '[Revise text def] MONDO:0013343 C1Q deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/94 label: 'addresses #91 and #92' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/940 label: '[Amend synonym] MONDO:0013343 C1Q deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/941 label: revised synonym scope for 'C1Q deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/942 label: Add subclass of axiom for MONDO:0100084 actinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/943 label: update text def for MONDO:0013343 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/944 label: add axiom to actinopathy - id: https://api.github.com/repos/monarch-initiative/mondo/issues/945 label: Issue 79.4 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/946 label: 'DO NOT MERGE excluding EXCLUDE fixes #863' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/947 label: Fix reasoning errors - id: https://api.github.com/repos/monarch-initiative/mondo/issues/948 label: Issue 926 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/949 label: fix typo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/95 label: 'addresses #62' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/950 label: revise superclass for MONDO_0010252 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/951 label: Revise classification of MONDO:0044013 'puerperal disorder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/952 label: reclassify MONDO_0004961 and MONDO:0004962 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/953 label: add MONDO:0100086 perinatal disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/954 label: remove superclasses for cystic fibrosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/955 label: obsolete MONDO:0022314 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/956 label: obsolete MONDO:0006775 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/957 label: add new terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/958 label: obsolete stage of disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/959 label: '[Revise logical def] MONDO:0013419 complement component C1s deficiency' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/96 label: treatment-induced diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/960 label: 'Review: nephropathic cystinosis and AKL' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/961 label: Various fixes including merge of nephropathic infantile cystinosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/962 label: Inappropriate exactMatch and/or subClassOf relations identified by cross-reference with genes associated in OMIM - id: https://api.github.com/repos/monarch-initiative/mondo/issues/963 label: 'Do not merge: obsolete MONDO:0021725' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/964 label: add def to MONDO:0013419 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/965 label: obsolete MONDO:0009651 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/966 label: obsolete MONDO:0009639 mitochondrial myopathy with lactic acidosis - id: https://api.github.com/repos/monarch-initiative/mondo/issues/967 label: reclassify 'Hinman syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/968 label: relink excluded subclass of - id: https://api.github.com/repos/monarch-initiative/mondo/issues/969 label: update label and syn scope for Mungan syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/97 label: 'added class ''MED12-related intellectual disability syndrome'' ' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/970 label: Create a template for 'revise a term label' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/971 label: Issue 808 fix do syn clashes - id: https://api.github.com/repos/monarch-initiative/mondo/issues/972 label: obsolete MONDO:0000275 monogenic disease - id: https://api.github.com/repos/monarch-initiative/mondo/issues/973 label: add disjointness axiom to MONDO:0019395 ! Hinman syndrome - id: https://api.github.com/repos/monarch-initiative/mondo/issues/974 label: '[Obsolete] MONDO_0001445 neurogenic bladder' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/975 label: relabel MONDO:0019303 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/976 label: add subclassOf relations to MONDO_0008608 'Down syndrome' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/977 label: Issue 692 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/978 label: rename MONDO:0007750 hypercholesterolemia, familial, 1 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/979 label: remove incorrect xref from MONDO:0016462 isolated agammaglobulinemia - id: https://api.github.com/repos/monarch-initiative/mondo/issues/98 label: Lipodystrophy, Familial Partial, Type 2 - Associated w/ hypercholesterolemia? - id: https://api.github.com/repos/monarch-initiative/mondo/issues/980 label: obsolete MONDO:0007563 and MONDO:0005305 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/981 label: OMIM diseases missing from Mondo - id: https://api.github.com/repos/monarch-initiative/mondo/issues/982 label: obsolete MONDO:0001445 neurogenic bladder (disease) - id: https://api.github.com/repos/monarch-initiative/mondo/issues/983 label: 'DO NOT MERGE: obsolete MONDO:0009678' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/984 label: obsolete MONDO:0022460 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/985 label: 'DO NOT MERGE: check to ensure no omim subsumptions' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/986 label: merge neonatal lupus erythematosus + neonatal systemic lupus erthematosus - id: https://api.github.com/repos/monarch-initiative/mondo/issues/987 label: Cardiac conduction system diseases - id: https://api.github.com/repos/monarch-initiative/mondo/issues/988 label: remove equiv axiom from MONDO:0015136 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/989 label: '[Revise subclass] MONDO:0006849 mastitis' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/99 label: Issue 66 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/990 label: '[Revise subclass] MONDO:0006737 dystocia and MONDO:0006791 hyperemesis gravidarum (disease)' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/991 label: Change 'replaced by annotation' on MONDO_0005158 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/992 label: Multiple xrefs to EFO terms - id: https://api.github.com/repos/monarch-initiative/mondo/issues/993 label: delete xref to obsolete EFO term - id: https://api.github.com/repos/monarch-initiative/mondo/issues/994 label: remove excluded subclass of from MONDO_0001202 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/995 label: obsolete 'sensory system disease' - id: https://api.github.com/repos/monarch-initiative/mondo/issues/996 label: revise superclasses for MONDO_0016823 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/997 label: update annotations on MONDO:0006849 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/998 label: add comment to MONDO:0005259 - id: https://api.github.com/repos/monarch-initiative/mondo/issues/999 label: revise superclass for MONDO_0006685 embeddings: null