Miracle-dz/UniFAR-FTUs huggingface dataset:
Systematic Evaluation of Physical Parameters Affecting the Terminal Settling Velocity of Microplastic Particles in Lakes Using CFD

Microplastic (MP) particles are commonly found in freshwater environments such as rivers and lakes, negatively affecting aquatic organisms and potentially causing water quality issues. Understanding the transport and fate of MP particles in these environments is a key prerequisite to mitigate the problem. For standing water bodies (lakes, ponds) the terminal settling velocity (TSV) is a key parameter, which determines particle residence times and exposure times of organisms to MP in lakes. Here we systematically investigate the effects of the physical parameters density, volume, shape and roundness, surface roughness and hydrophobicity and lake water temperature on the TSV of a large number of particles with regular and irregular shapes (equivalent diameters: 0.5–2.5 mm) and different polymer densities using computational fluid dynamics (CFD) simulations. Simulation results are compared to laboratory settling experiments and used to evaluate existing, semi-empirical relationships to estimate TSV. The semi-empirical relationships were generally found to be in reasonable agreement with the CFD simulations (R2 > 0.92). Deviations were attributed to simplifications in their descriptions of particle shapes. Overall the CFD simulations also matched the TSVs from the experiments quite well, (R2 > 0.82), but experimental TSVs were generally slower than model TSVs with the largest differences for the irregular particles made from biodegradable polymers. The deviations of up to 58% were found to be related to the attachment of air bubbles on irregularities in the particle surfaces caused by the hydrophobicity of the MP particles. Overall, density was the most decisive parameter for TSV with increases in TSV of up to 400% followed by volume (200%), water temperature (47%) and particle roundness (45%). Our simulation results provide a frame of reference for an improved evaluation of the relative effects of different particle characteristics on their TSV in lakes. This will in turn allow a more robust estimation of particle residence times and potential exposure times of organism to MP in the different compartments of a lake.
Beyond Climatic Variation: Human Disturbances Alter the Effectiveness of a Protected Area to Reduce Fires in a Tropical Peatland

Fire is considered a major threat to biodiversity in many habitats and the occurrence of fire has frequently been used to investigate the effectiveness of protected areas. Yet, despite the known importance of tropical peatlands for biodiversity conservation and serious threat that anthropogenically induced fires pose to this ecosystem, the influence of protected area designation on fire occurrence in tropical peatland has been poorly assessed thus far. Our study addresses this knowledge gap through providing a novel assessment of fire patterns from a tropical peatland protected area and surrounding landscape. We investigated the importance of both climatic factors (top-down mechanism) and human interventions (bottom-up mechanism) on fire occurrence through analyzing 20-years (2001–2020) of LANDSAT and Moderate Resolution Imaging Spectrometer (MODIS) images of the Padang Sugihan Wildlife Reserve and a 10-km buffer area surrounding this in Sumatra, Indonesia. Fire density was assessed in relation to road and canal construction. Monthly and annual precipitation was compared between wet and dry years. The reserve was effective in limiting fire compared to surrounding landscapes only in wet years. We revealed that peat fire occurrence in the protected area and buffer zone was not due to climatic factors alone, with distance from canals and roads also contributing toward fire occurrence. Our results suggest that it is essential to address tropical peatland fire processes at a landscape level, particularly at the surroundings of protected areas, in order to increase the effectiveness of fire protection, improve fire risk classification maps, and conserve threatened tropical peatland wildlife such as the Sumatran elephant.
Defined Antigen Skin Test for Bovine Tuberculosis Retains Specificity on Revaccination With Bacillus Calmette–Guérin

The Bacillus Calmette–Guérin (BCG) vaccination provides partial protection against, and reduces severity of pathological lesions associated with bovine tuberculosis (bTB) in cattle. Accumulating evidence also suggests that revaccination with BCG may be needed to enhance the duration of immune protection. Since BCG vaccine cross-reacts with traditional tuberculin-based diagnostic tests, a peptide-based defined antigen skin test (DST) comprising of ESAT-6, CFP-10, and Rv3615c to detect the infected among the BCG-vaccinated animals (DIVA) was recently described. The DST reliably identifies bTB-infected animals in experimental challenge models and in natural infection settings, and differentiated these from animals immunized with a single dose of BCG in both skin tests and interferon-gamma release assay (IGRA). The current investigation sought to assess the diagnostic specificity of DST in calves (Bos taurus ssp. taurus × B. t. ssp. indicus; n = 15) revaccinated with BCG 6 months after primary immunization. The results show that none of the 15 BCG-revaccinated calves exhibited a delayed hypersensitivity response when skin tested with DST 61 days post-revaccination, suggesting 100% diagnostic specificity (one-tailed lower 95% CI: 82). In contrast, 8 of 15 (diagnostic specificity = 47%; 95% CI: 21, 73) BCG-revaccinated calves were positive per the single cervical tuberculin (SCT) test using bovine tuberculin. Together, these results show that the DST retains its specificity even after revaccination with BCG and confirms the potential for implementation of BCG-based interventions in settings where test-and-slaughter are not economically or culturally feasible.
Theory of Mind and Concealing vs. Forthcoming Communication in Adolescence

Concealing information requires that adolescents manage the information that they share, which requires cognitive skills, for example, theory of mind (ToM). This study explored motivations for concealment that early adolescents (N = 90, M = 12.81 years, SD = 5.10 months, range 12–14 years, and 58% female) endorsed concealing or disclosing to friends and parents, in relation to their theory of mind. We found that adolescents broadly endorsed disclosure to both parents and friends, even when it might mean they would face consequences, be impolite (by not protecting another’s feelings), or face negative identity-related emotions. We found that ToM ability was associated with a tendency to endorse being forthcoming and sharing information with both friends and parents. These findings provide new insight into how the relation between ToM and concealment may change with age, specifically how in early adolescence it may foster open communication rather than concealment as is the case in early and middle childhood.
Oral Immune Priming Treatment Alters Microbiome Composition in the Red Flour Beetle Tribolium castaneum

It is now well-established that the microbiome is relevant for many of an organism’s properties and that its composition reacts dynamically to various conditions. The microbiome interacts with host immunity and can play important roles in the defenses against pathogens. In invertebrates, immune priming, that is, improved survival upon secondary exposure to a previously encountered pathogen, can be dependent upon the presence of the gut microbiome. However, it is currently unknown whether the microbiome changes upon priming treatment. We here addressed this question in a well-established model for immune priming, the red flour beetle Tribolium castaneum exposed to the entomopathogenic bacterium Bacillus thuringiensis (Bt). After priming treatments, the microbiota composition of beetle larvae was assessed by deep sequencing of the V1-V2 region of the bacterial 16S rRNA gene. We compared the effect of two established routes of priming treatments in this system: injection priming with heat-killed Bt and oral priming via ingestion of filtered sterilized bacterial spore culture supernatants. For oral priming, we used several strains of Bt known to vary in their ability to induce priming. Our study revealed changes in microbiome composition following the oral priming treatment with two different strains of Bt, only one of which (Bt tenebrionis, Btt) is known to lead to improved survival. In contrast, injection priming treatment with the same bacterial strain did not result in microbiome changes. Combined with the previous results indicating that oral priming with Btt depends on the larval microbiome, this suggests that certain members of the microbiome could be involved in forming an oral priming response in the red flour beetle.
Antimicrobial-Resistant Escherichia coli Distribution and Whole-Genome Analysis of Sequence Type 131 Escherichia coli Isolates in Public Restrooms in Taiwan

The threat of antibiotic-resistant bacteria to public health may originate from public restrooms. To better understand the community burden of antimicrobial-resistant Escherichia coli and sequence type complex 131 E. coli (STc131) in the public restroom, we performed a surveillance in public restrooms in southern Taiwan. Swabs were sampled from randomly selected public restrooms in Tainan, Taiwan in 2019. Antimicrobial susceptibility, phylogenetic grouping, and multiplex PCR were performed for the major ST complex in the B2 phylogenetic group. If STc131 isolates were identified, the whole-genome sequencing was performed. A total of 613 collection sites found 132 sites (21.5%) positive for E. coli. The most common phylogenetic group was A (30.9%) followed by B2 (30.3%). Ceftriaxone-resistant E. coli and extended-spectrum β-lactamases–producing E. coli were found in 2.4 and 1.0% of total public restrooms, respectively. The isolates in rural areas had higher ceftriaxone non-susceptibility than those in the city centers (3.9 vs. 1.2%, P = 0.038). Nine STc131 isolates were found in public restrooms, and most (77.8%) belonged to the subtype fimH41, whereas 22.2% belonged to fimH30. With the inclusion of STc131 isolates from human and dog fecal colonization in Taiwan, whole-genome sequencing was performed in 35 isolates. A large cluster of fimH41 in SNP-tree and GrapeTree was found from different sources (human, dog, and environment) and geographical areas. In conclusion, our surveillance of antimicrobial-resistant E. coli showed a higher prevalence of E. coli detected in public restrooms in the rural areas compared to those in city centers. The whole-genome sequence implies that fimH41 STc131 strains are successfully circulated in the community in Taiwan.
Numerical Investigation of Pollutant Transport in a Realistic Terrain with the SPH-SWE Method

A large amount of wastewater from industrial and urban residents enters rivers and lakes through the sewage outlet, causing a deterioration of water quality near the sewage outlet. The smoothed particle hydrodynamics (SPH) formulation based on the open-source Fortran code SPHysics is extended to solve the advective diffusion for the evolution of the pollution distribution with the shallow water equation (SWE). Several numerical cases, such as the uniform flow and dam-break flows in one and two dimensions, are studied to verify the accuracy of the present SPH-SWE diffusion model. The results are in good agreement with the analytical solutions. The concentration of the negative value and oscillation could be avoided. It demonstrates that the current SPH-SWE diffusion model has good stability and reliability for solving the pollutant transport equation. The actual terrain case is also simulated to predict the concentration distribution of the river. The concentration is distributed in the center of the Nanmenxia River, where the flow velocity is relatively high. The simulation results are reasonable, implying that it has a high potential in predicting the diffusion process of pollutants in the actual terrain.
Milk Immune Cell Composition in Dromedary Camels With Subclinical Mastitis

Mastitis represents one of the most important infectious diseases in camels with heavy economic losses due to reduced milk quantity and quality. Balanced immune cell composition and function in the mammary gland are essential for effective immune response to mastitis pathogens. The objective of the present study was to characterize the cellular immune response to subclinical mastitis in the mammary gland of dromedary camels. Therefore, immunostaining and flow cytometry were used to compare the cellular composition, leukocyte phenotype, and cell viability in camel milk from healthy she-camels (n = 8) and she-camels with subclinical mastitis (SCM; n = 6). In addition, the ex vivo phagocytic activity of milk phagocytes was compared between healthy and affected animals. The health status of the mammary gland was evaluated based on the California Mastitis Test (CMT) score. SCM (CMT score of ≥3 in the absence of clinical signs of mastitis) was found in six of the 56 sampled quarters (10.7 %) with only one affected quarter per animal. In comparison to milk from healthy camels, milk from SCM animals showed higher somatic cell count (SCC), higher numbers of CD45+ leukocytes with an expanded fraction of CD172a+ myeloid cells. Within the myeloid cell population, there was an increase in the percentage of granulocytes (CD172a+CD14low) with a decreased percentage of macrophages (CD172a+CD14high) in milk from affected animals compared to healthy animals. The decrease in lymphoid cells in SCM milk was mainly due to the decreased fraction of CD4+ helper T cells. Camel SCM was also associated with a stimulated phenotype, increased cell viability, and enhanced phagocytic activity of the milk phagocytes, macrophages and granulocytes. Collectively, the present study identified significant changes in SCC, leukocyte count, phenotype, viability, and function in association with subclinical mastitis in camels. The results of the present study support a better understanding of host-pathogen interaction mechanisms in the camel mammary gland.
Responsivity of the Striatal Dopamine System to Methylphenidate—A Within-Subject I-123-β-CIT-SPECT Study in Male Children and Adolescents With Attention-Deficit/Hyperactivity Disorder

Background: Methylphenidate (MPH) is the first-line pharmacological treatment of attention-deficit/hyperactivity disorder (ADHD). MPH binds to the dopamine (DA) transporter (DAT), which has high density in the striatum. Assessments of the striatal dopamine transporter by single positron emission computed tomography (SPECT) in childhood and adolescent patients are rare but can provide insight on how the effects of MPH affect DAT availability. The aim of our within-subject study was to investigate the effect of MPH on DAT availability and how responsivity to MPH in DAT availability is linked to clinical symptoms and cognitive functioning. Methods Thirteen adolescent male patients (9–16 years) with a diagnosis of ADHD according to the DSM-IV and long-term stimulant medication (for at least 6 months) with MPH were assessed twice within 7 days using SPECT after application of I-123-β-CIT to examine DAT binding potential (DAT BP). SPECT measures took place in an on- and off-MPH status balanced for order across participants. A virtual reality continuous performance test was performed at each time point. Further clinical symptoms were assessed for baseline off-MPH. Results On-MPH status was associated with a highly significant change (−29.9%) of striatal DAT BP as compared to off-MPH (t = −4.12, p = 0.002). A more pronounced change in striatal DAT BP was associated with higher off-MPH attentional and externalizing symptom ratings (Pearson r = 0.68, p = 0.01). Striatal DAT BP off-MPH, but not on-MPH, was associated with higher symptom ratings (Pearson r = 0.56, p = 0.04). Conclusion Our findings corroborate previous reports from mainly adult samples that MPH changes striatal DAT BP availability and suggest higher off-MPH DAT BP, likely reflecting low baseline DA levels, as a marker of symptom severity.
Tanshinone IIA Has a Potential Therapeutic Effect on Kawasaki Disease and Suppresses Megakaryocytes in Rabbits With Immune Vasculitis

Background and Objective It is urgent to find out an alternative therapy for Kawasaki disease (KD) since around 20% patients are resistant to intravenous immunoglobulin (IVIG) or aspirin. Tanshinone IIA is the active component of the traditional Chinese medicine Danshen (Salvia miltiorrhiza), which has anti-inflammatory and anti-platelet properties; however, whether or not tanshinone IIA has a therapeutic effect on KD remains unclear. Therefore, the present study aimed to examine the effect of tanshinone IIA on KD patients and rabbits with immune vasculitis, and to identify the potential mechanisms with special emphasis on megakaryopoiesis and megakaryocytic apoptosis. Methods Kawasaki disease patients were recruited and prescribed with tanshinone IIA in the absence or presence of aspirin and IVIG, and the inflammatory responses and platelet functions were determined. Megakaryocytes (MKs) isolated from rabbits with immune vasculitis and human megakaryocytic CHRF-288-11 cells were treated with tanshinone IIA to examine the colony forming unit (CFU) and apoptosis, respectively. Microarray assay was conducted to identify potential targets of tanshinone IIA-induced apoptosis. Results Tanshinone IIA reduced the serum levels of C-reactive protein (CRP), interleukin (IL)-1β, IL-6, and P-selectin in KD patients; such inhibitory effect was more significant compared to aspirin and IVIG. It also dose-dependently lowered the levels of tumor necrosis factor (TNF)-α and IL-8 in peripheral blood mononuclear cells isolated from KD patients. In rabbits with immune vasculitis, tanshinone IIA significantly reduced the serum levels of proinflammatory cytokines and platelet functions. In addition, tanshinone IIA significantly decreased the number of bone marrow MKs and inhibited the Colony Forming Unit-Megakaryocyte (CFU-MK) formation. In human megakaryocytic CHRF-288-11 cells, tanshinone IIA induced caspase-dependent apoptosis, probably through up-regulating TNF receptor superfamily member 9 (TNFRSF9) and the receptor (TNFRSF)-interacting serine/threonine-protein kinase 1 (RIPK1), which may contribute to its anti-platelet and anti-inflammatory properties. Conclusion Tanshinone IIA exerts better anti-inflammatory and anti-platelet effects in treating KD patients than aspirin and IVIG. It attenuates immune vasculitis likely by inhibiting IL-mediated megakaryopoiesis and inducing TNFRSF9/RIPK1/caspase-dependent megakaryocytic apoptosis. The findings therefore suggest that tanshinone IIA may be a promising alternative therapy for the treatment of KD.
Research on the Operating Mechanism of E-Commerce Poverty Alleviation in Agricultural Cooperatives: An Actor Network Theory Perspective

E-commerce poverty alleviation has become a new wisdom in China’s rural poverty alleviation, but there are a few empirical researches on e-commerce poverty alleviation based on farmer cooperatives. Taking four typical poverty counties in Zhejiang Province as an example, based on the actor network theory (ANT), this paper defines the participants and their obligatory passage point (OPP) from the e-commerce poverty alleviation actor network (EPAAN), combs the roles and interest demands of various stakeholders, and constructs the EPAAN model based on farmer cooperatives according to the translation process. We found that the EPAAN is a heterogeneous network by constantly updating, which consists of human actors with cooperatives as the main body and non-human actors. Moreover, our study illustrates that the formation and operation mechanism of cooperative e-commerce poverty alleviation network alliance under the background of targeted poverty alleviation can be well analyzed with the help of actor network theory. This study contributes to provide a feasible Chinese plan for the cause of poverty eradication all over the world, and provides a great reference value for global poverty governance.
Testosterone Level Reduction Increases the 10-Year Risk of Cardiovascular Diseases: A Retrospective Cohort Study in a Taiwanese Young Male Population

Low testosterone levels are associated with increased risk of cardiovascular disease; however, most previous studies assessed the relationship of testosterone levels with a history of cardiovascular (CV) events rather than with CV risk prediction scores consequently neglecting the effect of testosterone on CV risk in healthy young individuals. The aim of this study was to investigate the relationship between testosterone levels and predict the 10-year risk of cardiovascular disease. This retrospective cohort study was conducted through a large medical health examination system in four metropolises in Taiwan. Two risk scores were used to predict the 10-year cardiovascular risk of participants: the Framingham Risk Score (FRS) (2008) and the Atherosclerotic Cardiovascular Disease (ASCVD) Risk Estimator (2013). Multivariate-adjusted logistic regression was used to calculate odds ratios (ORs) for the correlation of testosterone level reduction with the increase in predicted CV risk. We used the MJ Health Research Foundation database to collect reports of 125,414 individuals who underwent medical checkups between 2007 and 2016. The final sample size included 1,253 male participants. A reduction in testosterone level between two subsequent medical checkups was associated with higher CV risk estimated by the FRS and ASCVD Risk Estimator in young participants aged 30–49 years (OR = 0.804, 95% CI: 0.711–0.909, p < 0.01 and OR = 0.841, 95% CI: 0.742–0.953, p < 0.01, respectively). Reduction in total testosterone levels increases CV risk in men aged 30 to 49 years, while the CV risk is not influenced by low testosterone levels at baseline.
Safety and Environmental Standards for Fuel Storage Sites: How to Enhance the Safety Integrity of an Overfill Protection System for Flammable Fuel Storage Tanks

Recent accidents with a catastrophic impact on Safety and Environment in the Oil & Gas (O&G) and Oil Refining industries has prompted the Regulators and the Process industry to move an important step forward to ensure to the Communities and the industry stakeholders that the risk of these accidents will be as lowest as reasonably practicable. As model for the approach between Regulators, Industry and Trade Unions in UK after the Buncefield accident the Process Safety Leadership Group (PSLG) issued in 2009 the "Safety and environmental standards for fuel storage sites" Final Report. The PSLG Final Report followed the pathway of Buncefield Standards Task Group (BSTG) by providing safety recommendations focused on improving safety in the design and operation of fuel storage sites. The PSLG Final Report safety recommendations are suitable to turn the safety investment into effective incident prevention. In this paper the PSLG Final Report safety recommendations related to the functional safety issues (reference is made to PSLG Final Report Part 1 "Systematic assessment of safety integrity level requirements" with specific reference to Appendix 2 and Part 2 "Protecting against loss of primary containment using high integrity systems"with specific reference to Appendix 4) are examined in detail aimed to conceive a safety instrumented system to enhance the Safety and Environment protection in fuel storage sites in full compliance both with the PSLG and International Standard IEC 61511 (2003) requirements. The overfill protection system for flammable fuel storage tanks of bulk hazardous liquids such as specifically gasoline and other materials such as naphtha, reformate, light crude oil, others likely to form a large vapour cloud, is examined in detail with a specific focus on safety integrity level assessment by LOPA (layers of protection analysis) method in compliance with the PSLG Final Report guidelines and IEC 61511 (2003) requirements.