Miracle-dz/UniFAR-FTUs huggingface dataset:
Making sense of IL‐6 signalling cues in pathophysiology

Unravelling the molecular mechanisms that account for functional pleiotropy is a major challenge for researchers in cytokine biology. Cytokine–receptor cross‐reactivity and shared signalling pathways are considered primary drivers of cytokine pleiotropy. However, reports epitomized by studies of Jak‐STAT cytokine signalling identify interesting biochemical and epigenetic determinants of transcription factor regulation that affect the delivery of signal‐dependent cytokine responses. Here, a regulatory interplay between STAT transcription factors and their convergence to specific genomic enhancers support the fine‐tuning of cytokine responses controlling host immunity, functional identity, and tissue homeostasis and repair. In this review, we provide an overview of the signalling networks that shape the way cells sense and interpret cytokine cues. With an emphasis on the biology of interleukin‐6, we highlight the importance of these mechanisms to both physiological processes and pathophysiological outcomes.
Sperm depletion in relation to developmental nutrition and genotype in Drosophila melanogaster

Nutrient limitation during development can restrict the ability of adults to invest in costly fitness traits, and genotypes can vary in their sensitivity to developmental nutrition. However, little is known about how genotype and nutrition affect male ability to maintain ejaculate allocation and achieve fertilization across successive matings. Using 17 isogenic lines of Drosophila melanogaster, we investigated how variation in developmental nutrition affects males’ abilities to mate, transfer sperm, and sire offspring when presented with successive virgin females. We found that, with each successive mating, males required longer to initiate copulation, transferred fewer sperm, and sired fewer offspring. Males reared on a low‐nutrient diet transferred fewer sperm than those reared on nutritionally superior diets, but the rate at which males depleted their sperm, as well as their reproductive performance, was largely independent of diet. Genotype and the genotype × diet interaction explained little of the variation in these male reproductive traits. Our results show that sperm depletion can occur rapidly and impose substantial fitness costs for D. melanogaster males across multiple genotypes and developmental environments.
Use of Commercially Produced Medical Education Videos in a Cardiovascular Curriculum: Multiple Cohort Study

Background Short instructional videos can make learning more efficient through the application of multimedia principles, and video animations can illustrate the complex concepts and dynamic processes that are common in health sciences education. Commercially produced videos are commonly used by medical students but are rarely integrated into curricula. Objective Our goal was to examine student engagement with medical education videos incorporated into a preclinical Cardiovascular Systems course. Methods Students who took the first-year 8-week Cardiovascular Systems course in 2019 and 2020 were included in the study. Videos from Osmosis were recommended to be watched before live sessions throughout the course. Video use was monitored through dashboards, and course credit was given for watching videos. All students were emailed electronic surveys after the final exam asking about the course’s blended learning experience and use of videos. Osmosis usage data for number of video views, multiple choice questions, and flashcards were extracted from Osmosis dashboards. Results Overall, 232/359 (64.6%) students completed surveys, with rates by class of 81/154 (52.6%) for MD Class of 2022, 39/50 (78%) for MD/MPH Class of 2022, and 112/155 (72.3%) for MD Class of 2023. Osmosis dashboard data were available for all 359 students. All students received the full credit offered for Osmosis engagement, and learning analytics demonstrated regular usage of videos and other digital platform features. Survey responses indicated that most students found Osmosis videos to be helpful for learning (204/232, 87.9%; P=.001) and preferred Osmosis videos to the traditional lecture format (134/232, 57.8%; P<.001). Conclusions Commercial medical education videos may enhance curriculum with low faculty effort and improve students’ learning experiences. Findings from our experience at one medical school can guide the effective use of supplemental digital resources for learning, and related evaluation and research.
Mental Health History and DECIDE (Decision-Making Education for Choices in Diabetes Everyday) Diabetes Support Program Outcomes Among African Americans With Type 2 Diabetes

Purpose The purpose of this study was to determine behavioral and clinical outcomes of the DECIDE (Decision-Making Education for Choices in Diabetes Everyday) diabetes support program trial participants with and without a mental health (MH) history by treatment arm. Methods A secondary analysis was conducted of data from the DECIDE trial sample of urban African American adults with type 2 diabetes (T2DM; N = 137) who received the DECIDE diabetes support program in 1 of 3 delivery formats: self-study (n = 46), individual (n = 45), and group (n = 46). Positive screen on the Patient Health Questionnaire-2 and/or reported MH diagnosis were coded as MH history. Self-management, knowledge, problem-solving, and A1C data at baseline and 1 week and 6 months postintervention were analyzed for participants with and without MH history. Results Prevalence of MH history was 37% in the sample. Among those with no MH history, knowledge and problem-solving improved at 6 months postintervention in all intervention arms. For those with MH history, knowledge and problem-solving improved in the self-study and individual arms but not in the group arm. Clinically but not statistically significant changes in A1C were observed at 6 months. Conclusions In an urban minority T2DM sample, those with an MH history benefited from the intervention, but delivery format mattered, with robust improvements when participants with an MH history received self-directed or one-on-one formats rather than group.
Barriers to COVID-19 vaccination among medical students in Kazakhstan: development, validation, and use of a new COVID-19 Vaccine Hesitancy Scale

ABSTRACT The purpose of this study was to identify the main barriers to vaccine acceptance among medical students in Kazakhstan and to develop the COVID-19 Vaccine Hesitancy Scale (COV-VHS). A cross-sectional study was carried out among students at Astana Medical University (N = 888, Kazakhstan) in March 2021. Only 2% of the participants were currently vaccinated, and 22.4% showed the potential for COVID-19 vaccine acceptance. The following barriers were the most important in COVID-19 vaccine acceptance: concern about possible side effects of vaccination (73%), absence of sufficient evidence on the effectiveness and safety (57%) and quality (42%), the belief that the immune system will cope with COVID-19 even without vaccination (38%), and lack of trust in the effectiveness of vaccination against COVID-19 (33%). Moreover, this study identified the following factors associated with COVID-19 vaccine acceptance: contextual influences (e.g., communication and media environment, socio-demographic factors, vaccination policies, and perception of the pharmaceutical industry), individual and group influences (e.g., personal experience with vaccination, attitudes about health and prevention, trust in the health system and providers, perceived risk), and specific issues on COVID-19 vaccine/vaccination (e.g., choice of vaccine can reduce vaccine hesitancy by 30%). A developed 12-item 6-factor model of COV-VHS showed good validity and reliability. In conclusion, there was a low-level potential for COVID-19 vaccine acceptance among medical students in Kazakhstan. Thus, an effective vaccination education and policy are needed to combat the COVID-19 pandemic.
Growth hormone signaling shapes the impact of environmental temperature on transcriptomic profile of different adipose tissue depots in male mice.

Growth hormone receptor knockout (GHRKO) mice are smaller, long living and have an increased metabolic rate compared with normal (N) littermates. However, it is known that thermoneutral conditions (30°-32°C) elicit metabolic adaptations in mice, increasing the metabolic rate. Therefore, we hypothesized that environmental temperature would affect the expression profile of different adipose tissue depots in GHRKO mice. For this, N (n=12) and GHRKO (n=11) male mice were maintained at 23°C or 30°C from weaning until 11 months of age. RNA sequencing from adipose tissue depots (epididymal - eWAT, perirenal - pWAT, subcutaneous - sWAT and brown fat - BAT) was performed. Thermoneutrality increased body weight gain in GHRKO but not N mice. Only a few genes were commonly regulated by temperature in N and GHRKO mice. The BAT was the most responsive to changes in temperature in both N and GHRKO mice. BAT Ucp1 and Ucp3 expression were decreased to a similar extent in both N and GHRKO mice under thermoneutrality. In contrast, eWAT was mostly unresponsive to changes in temperature. The response to thermoneutrality in GHRKO mice was most divergent from N mice in sWAT. Relative weight of sWAT was almost four times greater in GHRKO mice. Very few genes were regulated in N mice sWAT when compared to GHRKO mice. This suggest that this WAT depot has a central role in the adaptation of GHRKO mice to changes in temperature.
Scandium and Yttrium Environments in Aluminosilicate Glasses Unveiled by 45Sc/89Y NMR Spectroscopy and DFT Calculations: What Structural Factors Dictate the Chemical Shifts?

Aluminosilicate (AS) glasses incorporating rare-earth (RE) elements exhibit favorable mechanical and (magneto)optical properties that reflect their unusual structural organization. Yet, experimental reports on the local RE3+ environments in AS glasses are very sparse. We examine the Y3+ and Sc3+ cations in Y2O3–Al2O3–SiO2 and Sc2O3–Al2O3–SiO2 glasses of variable RE/Al/Si contents by utilizing magic-angle spinning (MAS) 89Y and 45Sc nuclear magnetic resonance (NMR) experiments coupled with density functional theory (DFT) calculations of 89Y/45Sc NMR chemical shifts. The DFT models reveal {Y[p]} and {Sc[p]} coordination numbers (p) spanning 5 ⩽ p ⩽ 8 and 4 ⩽ p ⩽ 7, respectively, with {Y[6], Y[7]} and {Sc[5], Sc[6]} species dominating. Wide isotropic chemical shift ranges of 35–354 ppm (89Y) and 48–208 ppm (45Sc) are observed, as well as sizable shift anisotropies up to ≈370 ppm and ≈250 ppm for 89Y and 45Sc, respectively. Both the isotropic and anisotropic chemical shifts grow when the coordination number p.
Medication Adherence and Blood Pressure Control: A Scientific Statement From the American Heart Association

The widespread treatment of hypertension and resultant improvement in blood pressure have been major contributors to the dramatic age-specific decline in heart disease and stroke. Despite this progress, a persistent gap remains between stated public health targets and achieved blood pressure control rates. Many factors may be important contributors to the gap between population hypertension control goals and currently observed control levels. Among them is the extent to which patients adhere to prescribed treatment. The goal of this scientific statement is to summarize the current state of knowledge of the contribution of medication nonadherence to the national prevalence of poor blood pressure control, methods for measuring medication adherence and their associated challenges, risk factors for antihypertensive medication nonadherence, and strategies for improving adherence to antihypertensive medications at both the individual and health system levels.
Evolving Gradient Boost: A Pruning Scheme Based on Loss Improvement Ratio for Learning Under Concept Drift

In nonstationary environments, data distributions can change over time. This phenomenon is known as concept drift, and the related models need to adapt if they are to remain accurate. With gradient boosting (GB) ensemble models, selecting which weak learners to keep/prune to maintain model accuracy under concept drift is nontrivial research. Unlike existing models such as AdaBoost, which can directly compare weak learners’ performance by their accuracy (a metric between [0, 1]), in GB, weak learners’ performance is measured with different scales. To address the performance measurement scaling issue, we propose a novel criterion to evaluate weak learners in GB models, called the loss improvement ratio (LIR). Based on LIR, we develop two pruning strategies: 1) naive pruning (NP), which simply deletes all learners with increasing loss and 2) statistical pruning (SP), which removes learners if their loss increase meets a significance threshold. We also devise a scheme to dynamically switch between NP and SP to achieve the best performance. We implement the scheme as a concept drift learning algorithm, called evolving gradient boost (LIR-eGB). On average, LIR-eGB delivered the best performance against state-of-the-art methods on both stationary and nonstationary data.
Solid-state fermentation of co-products from palm oil processing: Production of lipase and xylanase and effects on chemical composition

Abstract The palm oil industry generates large amounts of lignocellulosic co-products. Palm kernel cake (PKC) and palm pressed fibre (PPF) have nutritional limitations as ingredients in animal feed, and are therefore little used. Solid-state fermentation (SSF) is one alternative treatment to improve the nutritional value of these co-products and to increase their possible use, through the production of enzymes such as lipases and xylanases. These enzymes can reduce the contents of undesirable compounds, such as lipids, and degrade some components of the fibres to improve the digestibility of these co-products. The fungi Aspergillus niger, Aspergillus oryzae and Aspergillus awamori were able to grow in PKC/PPF (40/60 w/w) culture medium by SSF, and to produce xylanase and lipase. A. niger showed the highest lipase activity (20.7 U g−1) at 72 h. A. awamori higher xylanase activity than the other fungi at all culture periods, reaching a maximum activity of 134.2 U g−1 at 72 h. The unfermented co-products contained 7.49% lipids and 7.38% non-fibrous carbohydrates (NFC). Lipase produced by these fungi during SSF reduced the lipid content by 36%, 40% and 45% for A. oryzae, A. awamori and A. niger, respectively. The production of xylanases by SSF probably increased the NFC contents by up to 64%. Fermented solids with A. oryzae and A. awamori had the highest levels of NFC, 20.3% and 13.94%, respectively, which improved the nutritional value of these co-products.
Changes in the genetic composition of Myzus persicae nicotianae populations in Chile and frequency of insecticide resistance mutations

Abstract Myzus persicae is a cosmopolitan aphid that is highly polyphagous and an important agricultural pest. The subspecies M. persicae nicotianae has been described for highly specialized phenotypes adapted to tobacco (Nicotiana tabacum). In Chile, the population of M. persicae nicotianae was originally composed of a single red genotype that did not possess insecticide resistance mutations. However, in the last decade, variation in the colour of tobacco aphids has been observed in the field. To determine whether this variation stems from the presence of new genotypes, sampling was carried out across the entire distribution of tobacco cultivation regions in Chile. The aphids collected were genotyped, and the frequency of kdr (L1014F), super-kdr (M918T), modification of acetylcholinesterase (MACE) and nicotinic acetylcholine receptor β subunit (nAChRβ) mutations associated with insecticide resistance was determined. A total of 16 new genotypes of M. persicae nicotianae were detected in Chile: four of them possessed the MACE mutation, and none of them possessed the kdr, super-kdr or nAChRβ mutation. The previously described red genotype was not detected in any of the sampled fields over two seasons. These results raise questions about the mechanisms underlying changes in the genetic structure of M. persicae nicotianae populations in Chile. Future research aimed at addressing these questions could provide new insight into aphid evolution and agricultural practices.
A Unified Framework for Multi-Guidewire Endpoint Localization in Fluoroscopy Images

Objective: In this paper, Keypoint Localization Region-based CNN (KL R-CNN) is proposed, which can simultaneously accomplish the guidewire detection and endpoint localization in a unified model. Methods: KL R-CNN modifies Mask R-CNN by replacing the mask branch with a novel keypoint localization branch. Besides, some settings of Mask R-CNN are also modified to generate the keypoint localization results at a higher detail level. At the same time, based on the existing metrics of Average Precision (AP) and Percentage of Correct Keypoints (PCK), a new metric named APPCK is proposed to evaluate the overall performance on the multi-guidewire endpoint localization task. Compared with existing metrics, APPCK is easy to use and its results are more intuitive. Results: Compared with existing methods, KL R-CNN has better performance when the threshold is loose, reaching a mean APPCK of 90.65% when the threshold is 9 pixels. Conclusion: KL R-CNN achieves the state-of-the-art performance on the multi-guidewire endpoint localization task and has application potentials. Significance: KL R-CNN can achieve the localization of guidewire endpoints in fluoroscopy images, which is a prerequisite for computer-assisted percutaneous coronary intervention. KL R-CNN can also be extended to other multi-instrument localization tasks.
Nicotiana benthamiana asparagine synthetase associates with IP‐L and confers resistance against tobacco mosaic virus via the asparagine‐induced salicylic acid signalling pathway

Abstract Asparagine synthetase is a key enzyme that catalyses the conversion of amide groups from glutamine or ammonium to aspartate, which leads to the generation of asparagine. However, the role of asparagine synthetase in plant immunity remains largely unknown. Here, we identified a Nicotiana benthamiana asparagine synthetase B (NbAS‐B) that associates with tomato mosaic virus coat protein‐interacting protein L (IP‐L) using the yeast two‐hybrid assay and examined its role in tobacco mosaic virus (TMV) resistance. The association of IP‐L with NbAS‐B was further confirmed by in vivo co‐immunoprecipitation, luciferase complementation imaging, and bimolecular fluorescence complementation assays. IP‐L and NbAS‐B interact in the nucleus and cytosol and IP‐L apparently stabilizes NbAS‐B, thus enhancing its accumulation. The expressions of IP‐L and NbAS‐B are continuously induced on TMV‐green fluorescent protein (GFP) infection. Co‐silencing of IP‐L and NbAS‐B facilitates TMV‐GFP infection. Overexpression of NbAS‐B in tobacco reduces TMV‐GFP infection by significantly improving the synthesis of asparagine. Furthermore, the external application of asparagine significantly inhibits the infection of TMV‐GFP by activating the salicylic acid signalling pathway. These findings hold the potential for the future application of asparagine in the control of TMV.
HCBS Service Spending and Nursing Home Placement for Patients With Alzheimer’s Disease and Related Dementias: Does Race Matter?

Objectives: We examined the extent to which home and community-based services (HCBS) spending affected the likelihood of nursing home (NH) placement among black and white HCBS users with Alzheimer’s disease and related dementias (ADRD). Methods: The study population included new HCBS users with ADRD between 2010 and 2013 (N = 1,046,200). Results: We found that a one hundred dollar increase in monthly HCBS spending was associated with a 0.3 percentage points decrease in the NH placement rate among Whites, but a 0.3 percentage points increase in the NH placement rate among Blacks. The overall NH placement rate was 68.2% and 56.7% for Whites and Blacks, respectively. Discussion: A higher HCBS spending was associated with a decreased likelihood of NH placements for Whites but not for Blacks. It is important to understand how states’ HCBS expansion efforts influence Blacks and Whites with ADRD so that resources can be tailored to communities with different race-mix.
Associations of Neighborhood Safety and Collective Efficacy with Dietary Intake among Preschool-Aged Children and Mothers.

Background: Positive neighborhood environments may promote healthier behaviors, yet few studies have examined associations between neighborhood social environment and diet. We examined associations of neighborhood perceived safety, collective efficacy, and violent crime with dietary intake among preschool-aged children and their mothers. Methods: We administered a cross-sectional survey to 300 mothers/female caregivers of Medicaid-enrolled 2- to 4-year-old children in Philadelphia. Mothers reported their own and their child's dietary intake using the validated Dietary Screener Questionnaire. Mixed-effects linear regression models assessed associations of perceived neighborhood safety, collective efficacy, and census tract-level violent crime with parent and child dietary intake, adjusted for individual, family, and neighborhood covariates. Results: Among mothers, higher perceived neighborhood safety and collective efficacy were associated with higher daily intake of fruits/vegetables (β = 0.35 cups, 95% CI: 0.12-0.58 and β = 0.30 cups, 95% CI: 0.08-0.52, comparing the highest with lowest tertile). Higher neighborhood-perceived safety was also associated with higher whole-grain intake among mothers (β = 0.14 ounces, 95% CI: 0.02-0.27) and children (β = 0.07 ounces, 95% CI: 0.01-0.13, comparing the highest with lowest tertile). Neighborhood social exposures were not associated with intake of added sugars or sugar-sweetened beverages for mothers or children, nor were lower levels of violent crime associated with any outcome. Conclusions: More favorable perceptions of neighborhood safety and collective efficacy were associated with a slightly higher consumption of some healthy foods among mothers and their young children. Future prospective research is needed to confirm these findings, explore potential mechanisms, and determine whether intervening on the social environment improves diet.
Proactive forensic science in biometrics: Novel materials for fingerprint spoofing

Motivated by the need to prepare for the next generation of fingerprint spoofing, we applied the “proactive forensic science” strategy to the biometric field. The working concept, already successful in a few fields, aimed at adopting the sophisticated criminals' way of thinking, predicting their next move so that the crime‐fighting authorities can be one step ahead of them and take preventive measures, against biometric spoofing in this instance. This strategy involved the design, production, and characterization of innovative polymeric materials that could possibly serve in advanced fingerprint spoofs. Special attention was given to materials capable of fooling fingerprint readers equipped with spoof‐detecting abilities, known as “Presentation Attack Detection” (PAD) systems and often referred to as liveness detection. A series of direct cast fake fingerprints was produced from known commercially available spoofing materials, and was functionally tested to compare their performance with that of spoofs produced from the new polymers. The novel materials thus prepared were hydrogels based on polyethylene glycols (PEGs) that were chain‐extended. They showed good performance in deceiving security systems, considerably better than that of spoofs produced from commercial materials, and are, therefore, good spoofing candidates that law‐enforcement authorities should be aware of.