Miracle-dz/UniFAR-FTUs huggingface dataset:
A Review: Development of Computer Vision-Based Lameness Detection for Dairy Cows and Discussion of the Practical Applications

The computer vision technique has been rapidly adopted in cow lameness detection research due to its noncontact characteristic and moderate price. This paper attempted to summarize the research progress of computer vision in the detection of lameness. Computer vision lameness detection systems are not popular on farms, and the accuracy and applicability still need to be improved. This paper discusses the problems and development prospects of this technique from three aspects: detection methods, verification methods and application implementation. The paper aims to provide the reader with a summary of the literature and the latest advances in the field of computer vision detection of lameness in dairy cows.
V2O5 xerogel electrodes with much enhanced lithium-ion intercalation properties with N2annealing

V2O5 xerogel films were fabricated by casting V2O5 sols onto FTO glass substrates and annealing at 300 °C for 3 hours in nitrogen and air. The films annealed in nitrogen and air possessed different grain size and crystallinity. Optical absorption measurements and electrochemical impedance analyses revealed a reduced optical bandgap and enhanced electrical conductivity of N2 annealed V2O5 film. Lithium ion intercalation measurements showed that at a charge/discharge current density of 600 mAg−1, the N2 annealed sample possessed noticeably better lithium ion storage capability. In contrast to the air annealed sample, which started with a discharge capacity of 152 mAhg−1 but after 50 cycles the capacity had decreased to a low value of only 44 mAhg−1, the N2 annealed sample started with a low value of 68 mAhg−1 but the capacity increased sharply to a high value of 158 mAhg−1 at the 24th cycle, followed by little capacity degradation in later cycles and after 50 cycles, the discharge capacity was still as high as 148 mAhg−1. Much improved lithium ion intercalation capacity and cyclic stability could be attributed to surface defects V4+ and/or V3+ and associated oxygen vacancies introduced by N2annealing as well as much less crystallized vanadium oxide.
Molecular detection of Indian Ocean Lineage Chikungunya virus RNA in field collected Culex quinquefasciatus Say from Bangkok, Thailand but no evidence of virus replication

Following an outbreak of chikungunya virus (CHIKV) infections in Thailand in 2019, numerous cases of CHIKV infection have been diagnosed in Bangkok, the capital of the country. In our previous investigation of the vectors for disease transmission, we found natural infection of CHIKV in both male and female Aedes aegypti mosquitoes collected from the outbreak areas in Bangkok. Some reports mentioned the detection of CHIKV in Culex mosquitoes. In Thailand, the Culex quinquefasciatus Say mosquito is a common species found in urban and rural settings that coexists with Ae. aegypti. However, the role of Cx. quinquefasciatus mosquitoes in the spread of the Indian Ocean Lineage (IOL) of CHIKV in Thailand has never been investigated. In this study, Cx. quinquefasciatus were collected (16 males and 27 females) from an outbreak area in Bangkok. Eight of the 27 in field-caught female Cx. quinquefasciatus were positive for IOL CHIKV RNA, and 99–100% identity and full 100% coverage of sequences similar to CHIKV isolated from female Ae. aegypti in Bangkok, Thailand, whereas viral RNA was not detected in male samples using nested-RT-PCR. To determine whether CHIKV is able to replicate in Cx. quinquefasciatus, the laboratory strain of Cx. quinquefasciatus was allowed to feed on blood containing IOL CHIKV isolated from patient serum. The nested-RT-PCR, virus isolation, and immunofluorescence assay (IFA) were performed for CHIKV detection and replication. The results showed that CHIKV RNA was detected in Cx. quinquefasciatus until day 4 post infection. CHIKV did not produce any remarkable signs of infection, dissemination, or transmission in Cx. quinquefasciatus, and cytopathic effect (CPE) was not observed in C6/36 cells when infected with supernatant obtained from Cx. quinquefasciatus at days 7, 10, 14, and 21 post infection when compared to Ae. aegypti. The data from this study infer that CHIKV may be detected in Cx. quinquefasciatus but that the mosquito is not able to transmit CHIKV in Thailand.
Molecular and biochemical investigations of inborn errors of metabolism-altered redox homeostasis in branched-chain amino acid disorders, organic acidurias, and homocystinuria

Abstract India, resembling other developing nations, is confronting a hastening demographic switch to non-communicable diseases. Inborn errors of metabolism (IEM) constitute a varied heterogeneous group of disorders with variable clinical appearance, primarily in the pediatric populace. Congenital deformities and genetic disorders are significant for mortality throughout the world, and the Indian scenario is not very different. IEMs are a group of monogenic issues described by dysregulation of the metabolic networks that bring about development and homeostasis. Incipient evidence focuses on oxidative stress and mitochondrial dysfunction as significant contributors to the multiorgan modifications are detected in a few IEMs. The amassing of toxic metabolites in organic acidurias, respiratory chain, and fatty acid oxidation ailments inhibit mitochondrial enzymes and processes, bringing about elevated levels of reactive oxygen species (ROS). In different IEMs, as in homocystinuria, various sources of ROS have been suggested. In patients' samples along with cellular and experimental animal models, a few investigations have recognized substantial increments in ROS levels alongside diminishes in antioxidant defenses, relating with oxidative damage to proteins, lipids as well as DNA. Elevated ROS levels interrupt redox signaling pathways controlling biological processes such as cell development, differentiation, or apoptosis; however, few investigations explore these processes in IEMs. This review depicts the mitochondrial dysfunction, oxidative stress, redox signaling in branched-chain amino acid disorders, further organic acidurias, and homocystinuria, alongside the latest research investigating the proficiency of antioxidants in addition to mitochondria-targeted therapies as therapeutic components in these diseases.
Mapping cortical and subcortical asymmetries in substance dependence: Findings from the ENIGMA Addiction Working Group

Brain asymmetry reflects left‐right hemispheric differentiation, which is a quantitative brain phenotype that develops with age and can vary with psychiatric diagnoses. Previous studies have shown that substance dependence is associated with altered brain structure and function. However, it is unknown whether structural brain asymmetries are different in individuals with substance dependence compared with nondependent participants. Here, a mega‐analysis was performed using a collection of 22 structural brain MRI datasets from the ENIGMA Addiction Working Group. Structural asymmetries of cortical and subcortical regions were compared between individuals who were dependent on alcohol, nicotine, cocaine, methamphetamine, or cannabis (n = 1,796) and nondependent participants (n = 996). Substance‐general and substance‐specific effects on structural asymmetry were examined using separate models. We found that substance dependence was significantly associated with differences in volume asymmetry of the nucleus accumbens (NAcc; less rightward; Cohen's d = 0.15). This effect was driven by differences from controls in individuals with alcohol dependence (less rightward; Cohen's d = 0.10) and nicotine dependence (less rightward; Cohen's d = 0.11). These findings suggest that disrupted structural asymmetry in the NAcc may be a characteristic of substance dependence.
Momentary Emotion Differentiation: The Derivation and Validation of an index to Study Within-Person Fluctuations in Emotion Differentiation

Emotion differentiation refers to the tendency to label emotions in a granular way. While differentiation is an important individual difference in the context of psychological well-being, it is unknown how it fluctuates within individuals. Such a within-person measure is important, since it would allow the study of how changes in differentiation predict subsequent levels of other variables of interest. Here, we present a framework to study emotion differentiation at the within-person level by introducing a momentary emotion differentiation index. This index is directly derived from the classical emotion differentiation index, the intraclass correlation. We first give a theoretical derivation of this index. Next, using data from two experience sampling studies, we show how this new momentary index is related to other momentary indicators of well-being, and take the first steps in building its nomological network. A better understanding of within-person fluctuations in emotion differentiation will allow us to identify the causes and consequences of these fluctuations, and search for ways to teach individuals to increase their level of emotion differentiation.
Prognostic Factors in Patients With Borderline Resectable Pancreatic Ductal Adenocarcinoma Undergoing Resection

Background Neoadjuvant treatment (NT) has become standard in the management of borderline resectable pancreatic cancer (BR-PDAC), improving prognosis. The primary mechanism for this improvement remains unclear. Methods Clinicopathological data of patients with BR-PDAC who underwent resection between January 2008 and December 2018 at a single institution were retrospectively reviewed. Univariable and multivariate analyses were used to compare survival between patients who received NT vs. those who underwent upfront resection (UR). Results A total of 138 patients were included, 64 underwent UR and 74 NT. Neoadjuvant treatment resulted in higher margin-negative (R0) resection rate (68.9%) than UR (43.8%, P = .005). Neoadjuvant treatment was associated with improved overall survival (OS, P = .009) and progression-free survival (PFS, P = .027). R0 resection was also associated with improved OS (P < .001) and PFS (P < .001). On multivariable analysis, when adjusting for clinically relevant variables without considering R status, NT was an independent predictor for improved OS (P = .046) and PFS (P = .040). When additionally accounting for margin status, R0 was an independent predictor for improved OS (P < .001) and PFS (P < .001), while NT was not. Subgroup analysis, stratified by margin status, revealed that NT was not an independent predictor for OS or PFS for either subgroup. Discussion Neoadjuvant treatment is associated with improved OS and PFS in patients with BR-PDAC; however, this effect is outweighed by margin status. These results suggest that the primary benefit of NT was dependent on facilitating R0 resection. Upfront resection might remain a valid treatment option if R0 resection could be accurately predicted.
Attractiveness of different esthetic orthodontic wires

ABSTRACT Objective: The aim of this study was to evaluate the attractiveness of different types of esthetic orthodontic wires by laypeople and dentists. Methods: Five different types of orthodontic wires were evaluated: three esthetic wires (Teflon-coated, epoxy resin-coated and rhodium-coated wires), and two metallic wires (stainless steel and NiTi), as control. Monocrystalline ceramic brackets were installed in the maxillary arch of a patient presenting good dental alignment. The five evaluated wires were attached to the orthodontic appliance with an esthetic silicone elastic and photographed. The photographs were evaluated by 163 individuals, 110 dentists and 53 laypeople. The data were statistically evaluated by two-way ANOVA and one-way ANOVA, followed by Tukey tests. Results: There was a statistically significant difference in the attractiveness among the wires evaluated; the most esthetic was the rhodium-coated wire, followed by the epoxy resin-coated wire and, finally, the Teflon-coated wire, with no significant difference from the stainless steel and NiTi control archwires. There was no significant difference between the groups of evaluators. Conclusion: The most attractive was the rhodium-coated wire, followed by the epoxy resin-coated wire and, finally, the least attractive wire was the Teflon-coated wire, without statistically significant difference to the stainless steel and NiTi wires, used as control.
Levonorgestrel vs. Copper Intrauterine Devices for Emergency Contraception.

BACKGROUND In the United States, more intrauterine device (IUD) users select levonorgestrel IUDs than copper IUDs for long-term contraception. Currently, clinicians offer only copper IUDs for emergency contraception because data are lacking on the efficacy of the levonorgestrel IUD for this purpose. METHODS This randomized noninferiority trial, in which participants were unaware of the group assignments, was conducted at six clinics in Utah and included women who sought emergency contraception after at least one episode of unprotected intercourse within 5 days before presentation and agreed to placement of an IUD. We randomly assigned participants in a 1:1 ratio to receive a levonorgestrel 52-mg IUD or a copper T380A IUD. The primary outcome was a positive urine pregnancy test 1 month after IUD insertion. When a 1-month urine pregnancy test was unavailable, we used survey and health record data to determine pregnancy status. The prespecified noninferiority margin was 2.5 percentage points. RESULTS Among the 355 participants randomly assigned to receive levonorgestrel IUDs and 356 assigned to receive copper IUDs, 317 and 321, respectively, received the interventions and provided 1-month outcome data. Of these, 290 in the levonorgestrel group and 300 in the copper IUD group had a 1-month urine pregnancy test. In the modified intention-to-treat and per-protocol analyses, pregnancy rates were 1 in 317 (0.3%; 95% confidence interval [CI], 0.01 to 1.7) in the levonorgestrel group and 0 in 321 (0%; 95% CI, 0 to 1.1) in the copper IUD group; the between-group absolute difference in both analyses was 0.3 percentage points (95% CI, -0.9 to 1.8), consistent with the noninferiority of the levonorgestrel IUD to the copper IUD. Adverse events resulting in participants seeking medical care in the first month after IUD placement occurred in 5.2% of participants in the levonorgestrel IUD group and 4.9% of those in the copper IUD group. CONCLUSIONS The levonorgestrel IUD was noninferior to the copper IUD for emergency contraception. (Supported by the Eunice Kennedy Shriver National Institute of Child Health and Human Development and others; ClinicalTrials.gov number, NCT02175030.).
Cortical connectivity of the nucleus basalis of Meynert in Parkinson’s disease and Lewy body dementias

Abstract Parkinson’s disease dementia (PDD) and dementia with Lewy bodies (DLB) are related conditions that are associated with cholinergic system dysfunction. Dysfunction of the nucleus basalis of Meynert (NBM), a basal forebrain structure that provides the dominant source of cortical cholinergic innervation, has been implicated in the pathogenesis of both PDD and DLB. Here we leverage the temporal resolution of magnetoencephalography with the spatial resolution of MRI tractography to explore the intersection of functional and structural connectivity of the NBM in a unique cohort of PDD and DLB patients undergoing deep brain stimulation of this structure. We observe that NBM-cortical structural and functional connectivity correlate within spatially and spectrally segregated networks including: (i) a beta band network to supplementary motor area, where activity in this region was found to drive activity in the NBM; (ii) a delta/theta band network to medial temporal lobe structures encompassing the parahippocampal gyrus; and (iii) a delta/theta band network to visual areas including lingual gyrus. These findings reveal functional networks of the NBM that are likely to subserve important roles in motor control, memory and visual function, respectively. Furthermore, they motivate future studies aimed at disentangling network contribution to disease phenotype.
Acid in ionic liquid: An efficient system for hydrolysis of lignocellulose

Acid in ionic liquid was demonstrated as an efficient system for hydrolysis of lignocellulosic materials with improved total reducing sugars (TRS) yield under mild conditions. TRS yields were up to 66%, 74%, 81% and 68% for hydrolysis of corn stalk, rice straw, pine wood and bagasse, respectively, in C4mimCl in the presence of 7 wt% hydrogen chloride at 100 °C under atmospheric pressure within 60 min. Different combinations between ionic liquids, such as C6mimCl, C4mimBr, AmimCl, C4mimHSO4, and SbmimHSO4, and acids, including sulfuric acid, nitric acid, phosphoric acid, as well as maleic acid, afforded similar results albeit longer reaction time was generally required comparing with the combination of C4mimCl and hydrochloric acid. FT-IR spectra and elemental analysis of the recovered residues indicated that modification of lignin occurred during sulfuric acid catalyzed hydrolysis. In addition, kinetic modeling based on experimental data suggested that the hydrolysis likely followed a consecutive first-order reaction sequence, where k1 and k2, the rate constants for TRS formation and TRS degradation, were determined as 0.068 min−1 and 0.007 min−1, respectively. This novel system may be valuable to facilitate cost-efficient conversion of biomass into biofuels and biobased products.
Modelling human liver microphysiology on a chip through a finite element based design approach

Organ‐on‐a‐chip (OoaC) are microfluidic devices capable of growing living tissue and replicate the intricate microenvironments of human organs in vitro, being heralded as having the potential to revolutionize biological research and healthcare by providing unprecedented control over fluid flow, relevant tissue to volume ratio, compatibility with high‐resolution content screening and a reduced footprint. Finite element modelling is proven to be an efficient approach to simulate the microenvironments of OoaC devices, and may be used to study the existing correlations between geometry and hydrodynamics, towards developing devices of greater accuracy. The present work aims to refine a steady‐state gradient generator for the development of a more relevant human liver model. For this purpose, the finite element method was used to simulate the device and predict which design settings, expressed by individual parameters, would better replicate in vitro the oxygen gradients found in vivo within the human liver acinus. To verify the model's predictive capabilities, two distinct examples were replicated from literature. Finite element analysis enabled obtaining an ideal solution, designated as liver gradient‐on‐a‐chip, characterised by a novel way to control gradient generation, from which it was possible to determine concentration values ranging between 3% and 12%, thus providing a precise correlation with in vivo oxygen zonation, comprised between 3%–5% and 10%–12% within respectively the perivenous and periportal zones of the human liver acinus. Shear stress was also determined to average the value of 0.037 Pa, and therefore meet the interval determined from literature to enhance liver tissue culture, comprised between 0.01 − 0.05 Pa.
Segmenting Vitiligo on Clinical Face Images Using CNN Trained on Synthetic and Internet Images

Accurately diagnosing and describing the severity of vitiligo is crucial for prognostication, treatment selection and comparison. Currently, disease severity scores require dermatologists to estimate percentage area of involvement, which is subjected to inter and intra-assessor variability. Previous studies focus on pure skin but vitiligo on the face, which has a more serious impact on patients’ quality of life, was completely neglected. Convolutional neural networks (CNNs) have good performance on many segmentation tasks. However, due to data privacy, it is hard to have a large clinical vitiligo face image dataset to train a CNN. To address this challenge, images from two different sources, the Internet and the proposed vitiligo face synthesis algorithm, are employed in training. 843 vitiligo images taken from different viewpoints were collected from the Internet. These images are hugely different from the target clinical images collected according to a newly established international standard. To have more vitiligo face images similar to the target clinical images to enhance segmentation performance, an image synthesis algorithm is proposed. Both synthetic and Internet images are used to train a CNN which is modified from the fully convolutional network (FCN) to segment face vitiligo lesions. The results show that 1) the synthetic images effectively improve segmentation performance; 2) the proposed algorithm achieves 1.06$\%$ error for the face vitiligo area estimation and 3) it is more accurate than two dermatologists and all the previous automated vitiligo segmentation methods, which were designed for segmentation vitiligo on pure skin.
Simulating SOC changes in long‐term experiments with RothC and CENTURY: model evaluation for a regional scale application

Abstract. Predictive, regional use of soil organic matter (SOM) models requires evaluation of the performance of models with datasets from long‐term experiments relevant to the scenarios of interest to the regional scale study, and relevant to the climate of the study region. Datasets from six long‐term experiments were used to evaluate the performance of RothC and CENTURY, two of the most widely used and tested SOM models. Three types of model run were completed for each site: (1) CENTURY model alone; (2) RothC model run to fit measured SOC values, by iteratively adjusting C inputs to soil; and (3) RothC model run using C inputs derived from CENTURY runs. In general, the performance of both models was good across all datasets. The runs using RothC (iteratively changing C inputs to fit measured SOC values) tended to have the best fit to model data, since this method involved direct fitting to observed data. Carbon inputs estimated by RothC were, in general, lower than those estimated by CENTURY, since SOC in CENTURY tends to turn over faster than SOC in RothC. The runs using RothC with CENTURY C inputs tended to have the poorest fit of all, since CENTURY predicted greater C inputs than were required by RothC to maintain the same SOC content. A plausible model fit to measured SOC data may be obtained with widely differing C input values, due to differences in predicted decomposition rates between models. It remains unclear which, if either, modelling approach most closely represents reality since both C inputs to soil and decomposition rates for bulk SOM are difficult to determine experimentally. Further progress in SOM modelling can only be the result of research leading to better process understanding, both of net C inputs to soil and of SOM decomposition rates. The use of default methods for estimating initial SOC pools in RothC and CENTURY may not always be appropriate and may require adjustment for specific sites. The simulations presented here also suggest details of SOC dynamics not shown by available measured data, especially trends between sampling intervals, and this emphasizes the importance of archived soil samples in long‐term experiments.