Miracle-dz/UniFAR-FTUs huggingface dataset:
Research on Additive Manufacturing Technology in the Field of Mold Repair

With the rapid development of modern industry, mold as a basic hardware facility has become one of the important factors affecting the development of modern industry. The surface quality and working reliability of the mold have a direct impact on the quality of the part. Faced with a large number of failed molds in industrial production, fast and reliable mold repair technology can realize mold reuse under the premise of ensuring mold performance. It effectively shortens the construction period, saves costs and reduces mold waste. The article outlines the characteristics of wire and arc additive manufacturing technology, selective electron beam melting technology and laser cladding technology in additive manufacturing technology. The application characteristics of three additive manufacturing technologies in mold repair are analyzed. The application prospect of laser cladding technology in mold repair is pointed out. In view of the improved work reliability, the direction of laser cladding technology in the field of mold repair can be prospected.
CYTOLOGICAL CHARACTERIZATION OF MULTICELLULAR STRUCTURES IN EMBRYOGENIC MICROSPORE CULTURES OF BRASSICA NAPUS L.

: We investigated an embryogenic microspore culture from Brassica napus L. cv. “Topas”, 3 days after induction of embryogenesis, using light and electron microscopical techniques. According to our observations, 6 groups of uni- or multicellular structures could be distinguished by differences in size, wall structure, structure and distribution of organelles and the degree of vacuolisation. Only one multicellular group represents real proembryos which are able to form embryos and to regenerate plants. These 6 groups could be detected in living cultures using an inverted microscope. The cell size and the degree of vacuolization are especially useful markers to distinguish the groups. Separate cultivation of the multicellular complexes of the 6 groups in culture plate inserts from the third day of culture proved that only one group contains real proembryos.
A Preliminary Study on the Effect of Pandanus amaryllifolius Extract as Green Stabilizer to the Growth of Nanostructured ZnO

Nanostructured zinc oxide (ZnO) were successfully prepared by using phyto assisted solution immersion process. ZnO were grown on a glass substrate coated with ZnO nanoparticle thin-film as seed layer at annealing temperature of 450°C. The fabricated nanostructured ZnO exhibit absorption at ∼375 nm as revealed from the UV-visible absorption spectrum, and it is comparable with ZnO nanostructured synthesized from hexamethylenetetramine (HMTA). X-ray diffraction (XRD) measurement revealed a sharp peak corresponding to the hexagonal wurtzite structure of nanostructured ZnO. Field emission scanning electron microscopy (FESEM) showed average size of ZnO at 24.15 nm slightly smaller compared to synthesized from HMTA; 30.54 nm. It should also be highlighted that the needs of using this alternative green method are due to the advantages of low working temperature and cost-effective, and with the least possible damage to the environment.
Endocrine regulation of female contact sex pheromone production in the German cockroach, Blattella germanica

ABSTRACT The amount of the major component of the cuticular sex pheromone, 3, 11‐dimethyl‐2‐nonacosanone, on individual female German cockroaches, Blattella germanica (L.), as a function of age was determined by gas‐liquid‐chromatographic analysis. Accumulation of phermone increased with age in both virgin and mated females. During the first gono‐trophic cycle, the pheromone accumulated most rapidly when oocyte growth rates were maximal (days 5–10), and least rapidly while the female carried an ootheca (days 11–32). Pheromone accumulation was similar in virgin and mated females when the same physiological stages (determined by oocyte maturation) were considered. Inhibition of Juvenile Hormone release, through allatectomy, chemicals (precocene or fluoromevalonate), or through mechanical egg case implants, suppressed or delayed pheromone production and oocyte growth. The Juvenile Hormone analogue ZR512 induced allatectomized or head‐ligated females and females with chemically or mechanically inhibited corpora allata to produce pheromone and enlarge their basal oocytes. Finally, ZR512 applied to intact females stimulated pheromone production in a dose‐dependent manner.
Prey risk assessment depends on conspecific density

In many systems, the number of prey killed by predators increases with prey density. This in turn generates higher levels of the indirect signals that prey use to assess predation risk. A model developed by Peacor (2003) showed that prey that respond to predator cues without accounting for conspecific density will consistently over- or under-estimate risk and therefore invest improperly in anti-predator defense. We tested this model using Rana temporaria tadpoles as prey and Aeshna cyanea dragonfly larvae as predators. As assumed by the model, prey reduced risky activity with increasing concentrations of predator kairomones and increased activity at high prey density. However, prey did not react to changes in cue or density if the ratio of cue-to-density remained constant. Prey therefore monitored their per capita risk, strongly supporting Peacor's model.
How Proactive Interference during New Associative Learning Impacts General and Specific Memory in Young and Old

Abstract Some prior research has found that older adults are more susceptible to proactive interference than young adults. The current study investigated whether age-related deficits in pFC-mediated cognitive control processes that act to detect and resolve interference underlie increased susceptibility to proactive interference in an associative memory task. Young and older adults were scanned while tasked with remembering which associate (face or scene) objects were paired with most recently during study, under conditions of high, low, or no proactive interference. After scanning, participants' memory was tested for varying levels of episodic detail about the pairings (i.e., target category vs. specific target category vs. specific target associate). Young and older adults were similarly susceptible to proactive interference. Memory for both the general target category and the specific target associate worsened as the level of proactive interference increased, with no robust age differences. For both young and older adults, the left ventrolateral pFC, which has been indicated in controlled retrieval of goal-relevant conceptual representations, was sensitive to increasing levels of interference during encoding but was insensitive to associative memory accuracy. Consistent with the Compensation-Related Utilization of Neural Circuits Hypothesis model of cognitive aging, the ventromedial pFC, which is involved in the monitoring of internally generated information, was recruited more by older than young adults to support the successful retrieval of target–object pairs at lower levels of proactive interference. Collectively, these results suggest that some older adults are able to engage in the cognitive control processes necessary to resolve proactive interference to the same extent as young adults.
Cerebrospinal fluid endo-lysosomal proteins as potential biomarkers for Huntington’s disease

Molecular markers derived from cerebrospinal fluid (CSF) represent an accessible means of exploring the pathobiology of Huntington’s disease (HD) in vivo. The endo-lysosomal/autophagy system is dysfunctional in HD, potentially contributing to disease pathogenesis and representing a potential target for therapeutic intervention. Several endo-lysosomal proteins have shown promise as biomarkers in other neurodegenerative diseases; however, they have yet to be fully explored in HD. We performed parallel reaction monitoring mass spectrometry analysis (PRM-MS) of multiple endo-lysosomal proteins in the CSF of 60 HD mutation carriers and 20 healthy controls. Using generalised linear models controlling for age and CAG, none of the 18 proteins measured displayed significant differences in concentration between HD patients and controls. This was affirmed by principal component analysis, in which no significant difference across disease stage was found in any of the three components representing lysosomal hydrolases, binding/transfer proteins and innate immune system/peripheral proteins. However, several proteins were associated with measures of disease severity and cognition: most notably amyloid precursor protein, which displayed strong correlations with composite Unified Huntington’s Disease Rating Scale, UHDRS Total Functional Capacity, UHDRS Total Motor Score, Symbol Digit Modalities Test and Stroop Word Reading. We conclude that although endo-lysosomal proteins are unlikely to have value as disease state CSF biomarkers for Huntington’s disease, several proteins demonstrate associations with clinical severity, thus warranting further, targeted exploration and validation in larger, longitudinal samples.
Prediction of LncRNA Encoded Small Peptides in Glioma and The Oligomer Channel Functional Analysis Using in Silico Approaches

Glioma is lethal malignant brain cancers, many reports have shown that abnormalities in the behavior of water and ion channels play an important role in regulating glioma proliferation, migration, apoptosis and differentiation. Recently, new studies have suggested that some long noncoding RNAs (lncRNAs) containing small open reading frames (smORFs), can encode small peptides and form oligomers for water or ion regulation. However, because these peptides are difficult to identify, their functional mechanisms are far from being clearly understood. In this study, we used bioinformatic methods and softwares to identify and evaluate lncRNAs in gliomas that may encode small transmembrane peptides. Combining ab initio homology modeling, molecular dynamics simulations and energetic calculations, we constructed a predictive model and predicted the oligomer channel activity of peptides by identifying the lncRNA ORFs. We found that one key hub lncRNA, DLEU1, which contains two smORFs (ORF1 and ORF8) could encode small peptides that form pentameric channels. The mechanics of water and ion (Na + and Cl-) transport through this pentameric channel were simulated. The potential of mean force (PMF) of the H2O molecules along the two ORF-encoded peptide channels indicated that the energy barrier was different between ORF1 and ORF8. The ORF1-encoded peptide pentamer acted as a self-assembled water channel but not as an ion channel, and the ORF8 neither permeating ions nor water. This work provides new methods and theoretical support for further elucidation of the function of lncRNA-encoded small peptides and their role in cancer. Additionally, it provides a theoretical basis for drug development.
Rewiring of peatland plant-microbe networks outpaces species turnover

Enviro-climatological changes are thought to be causing alterations in ecosystem processes through shifts in plant and microbial communities; however, how links between plant and microbial communities change with enviro-climatological change is likely to be less straightforward but may be fundamental for many ecological processes. To address this, we assessed the composition of the plant community and the prokaryotic community –using amplicon-based sequencing– of three European peatlands that were distinct in enviro-climatological conditions. Bipartite networks were used to construct site-specific plant-prokaryote co-occurrence networks. Our data show that between sites, plant and prokaryotic communities differ and that turnover in interactions between the communities was complex. Essentially, turnover in plant-microbial interactions is much faster than turnover in the respective communities. Our findings suggest that network rewiring does largely result from novel associations between species that are common and shared across the networks. Turnover in network composition is largely driven by novel interactions between a core community of plants and microorganisms. Taken together our results indicate that plant-microbe associations are context dependent, and that changes in enviro-climatological conditions will likely lead to network rewiring. Integrating turnover in plant-microbe interactions into studies that assess the impact of enviro-climatological change on peatland ecosystems is essential to understand ecosystem dynamics and must be combined with studies on the impact of these changes on ecosystem processes.
Transcription Co-Factor LBH Is Necessary for Maintenance of Stereocilia Bundles and Survival of Cochlear Hair Cells

Hearing loss affects ~10% of adults worldwide and is irreversible. Most sensorineural hearing loss is caused by progressive loss of mechanosensitive hair cells (HCs) in the cochlea of the inner ear. The molecular mechanisms underlying HC maintenance and loss are largely unknown. Our previous cell-specific transcriptome analysis showed that Limb-Bud-and-Heart (LBH), a transcription co-factor implicated in development, is abundantly expressed in outer hair cells (OHCs). We used Lbh-null mice to identify its role. Surprisingly, Lbh deletion did not affect differentiation and early development of HCs, as nascent HCs in Lbh knockout mice had normal looking stereocilia bundles. Whole-cell recording showed that the stereocilia bundle was mechanosensitive and OHCs exhibited the characteristic electromotility. However, Lbh-null mice displayed progressive hearing loss, with stereocilia bundle degeneration and OHC loss as early as postnatal day 12. Cell-specific RNA-seq and bioinformatic analyses identified Spp1, Six2, Gps2, Ercc6, Snx6 as well as Plscr1, Rarb, Per2, Gmnn and Map3k5 among the top five transcription factors up- or down-regulated in Lbh-null OHCs. Furthermore, this analysis showed significant gene enrichment of biological processes related to transcriptional regulation, cell cycle, DNA damage/repair and autophagy. In addition, Wnt and Notch pathway-related genes were found to be dysregulated in Lbh-deficient OHCs. We speculate that LBH may promote maintenance of HCs and stereocilia bundles by regulating Notch and Wnt signaling activity. Our study implicates, for the first time, loss of LBH function in progressive hearing loss, and demonstrates a critical requirement of LBH in promoting HC survival.
Anaplerotic Pathways in Halomonas elongata: The Role of the Sodium Gradient

Salt tolerance in the γ-proteobacterium Halomonas elongata is linked to its ability to produce the compatible solute ectoine. The metabolism of ectoine production is of great interest since it can shed light on the biochemical basis of halotolerance as well as pave the way for the improvement of the biotechnological production of such compatible solute. The ectoine production pathway uses oxaloacetate as a precursor, thereby connecting ectoine production to the anaplerotic reactions that refill carbon into the TCA cycle. This places a high demand on these reactions and creates the need to regulate them not only in response to growth but also in response to extracellular salt concentration. In this work we combine modeling and experiments to analyze how these different needs shape the anaplerotic reactions in H. elongata. First, the stoichiometric and thermodynamic factors that condition the flux distributions are analyzed, then the optimal patterns of operation for oxaloacetate production are calculated. Finally, the phenotype of two deletion mutants lacking potentially relevant anaplerotic enzymes: Phosphoenolpyruvate carboxylase (Ppc) and Oxaloacetate decarboxylase (Oad) is experimentally characterized. The results show that the anaplerotic reactions in H. elongata are indeed subject to different evolutionary pressures than those of other gram-negative bacteria. Ectoine producing halophiles must meet a higher metabolic demand for oxaloacetate and the reliance of many marine bacteria on the Entner-Doudoroff pathway compromises the anaplerotic efficiency of Ppc, which is usually one of the main enzymes fulfilling this role. The anaplerotic flux in H. elongata is contributed not only by Ppc but also by Oad, an enzyme that has not yet been shown to play this role in vivo. Ppc is necessary for H. elongata to grow normally at low salt concentrations but it is not required to achieve near maximal growth rates as long as there is a steep sodium gradient. On the other hand, the lack of Oad presents serious difficulties to grow at high salt concentrations. This points to a shared role of these two enzymes in guaranteeing the supply of OAA for biosynthetic reactions.
A Chemical-genetics and Nanoparticle Enabled Approach for in vivo Protein Kinase Analysis

The human kinome contains >500 protein kinases, and regulates up to 30% of the proteome. Kinase study is currently hindered by a lack of in vivo analysis approaches due to two factors: our inability to distinguish the kinase reaction of interest from those of other kinases in live cells and the cell impermeability of the ATP analogs. Herein, we tackled this issue by combining the widely used chemical genetic method developed by Dr. Kevan Shokat and colleagues with nanoparticle-mediated intracellular delivery of the ATP analog. The critical AKT1 protein kinase, which has been successfully studied with the method, was used as our initial prototype. Briefly, enlargement of the ATP binding pocket, by mutating the gate-keeper Methionine residue to a Glycine, prompted the mutant AKT1 to preferentially use the bulky ATP analog N6-Benzyl-ATP-γ-S (A*TPγS) and, thus, differentiating AKT1-catalyzed and other phosphorylation events. The lipid/calcium/phosphate (LCP) nanoparticle was used for efficient intracellular delivery of A*TPγS, overcoming the cell impermeability issue. The mutant, but not wild-type, AKT1 used the delivered A*TPγS for autophosphorylation and phosphorylating its substrates in live cells. Thus, an in vivo protein kinase analysis method has been developed. The strategy should be widely applicable to other protein kinases.
FFA and OFA Encode Distinct Types of Face Identity Information

Faces of different people elicit distinct fMRI patterns in several face-selective regions of the human brain. Here we used representational similarity analysis to investigate what type of identity-distinguishing information is encoded in three face-selective regions: fusiform face area (FFA), occipital face area (OFA), and posterior superior temporal sulcus (pSTS). In a sample of 30 human participants (22 females, 8 males), we used fMRI to measure brain activity patterns elicited by naturalistic videos of famous face identities, and compared their representational distances in each region with models of the differences between identities. We built diverse candidate models, ranging from low-level image-computable properties (pixel-wise, GIST, and Gabor-Jet dissimilarities), through higher-level image-computable descriptions (OpenFace deep neural network, trained to cluster faces by identity), to complex human-rated properties (perceived similarity, social traits, and gender). We found marked differences in the information represented by the FFA and OFA. Dissimilarities between face identities in FFA were accounted for by differences in perceived similarity, Social Traits, Gender, and by the OpenFace network. In contrast, representational distances in OFA were mainly driven by differences in low-level image-based properties (pixel-wise and Gabor-Jet dissimilarities). Our results suggest that, although FFA and OFA can both discriminate between identities, the FFA representation is further removed from the image, encoding higher-level perceptual and social face information. SIGNIFICANCE STATEMENT Recent studies using fMRI have shown that several face-responsive brain regions can distinguish between different face identities. It is however unclear whether these different face-responsive regions distinguish between identities in similar or different ways. We used representational similarity analysis to investigate the computations within three brain regions in response to naturalistically varying videos of face identities. Our results revealed that two regions, the fusiform face area and the occipital face area, encode distinct identity information about faces. Although identity can be decoded from both regions, identity representations in fusiform face area primarily contained information about social traits, gender, and high-level visual features, whereas occipital face area primarily represented lower-level image features.
Fear conditioning potentiates the hippocampal CA1 commissural pathway in vivo and increases awake phase sleep

The hippocampus is essential for spatial learning and memory. To assess learning we used contextual fear conditioning (cFC), where animals learn to associate a place with aversive events such as foot-shocks. Candidate memory mechanisms for cFC are long-term potentiation and long-term depression, but there is little direct evidence of those mechanisms operating in the hippocampus in vivo following cFC. Also, little is known about the behavioral state changes induced by cFC. To address these shortcomings, we used motion tracking and recorded local field potentials in freely behaving mice by placing a stimulating electrode in the left dorsal CA1 region and positioning recording electrodes in the right dorsal CA1 region. Synaptic strength in the commissural pathway was monitored by measuring field excitatory postsynaptic potentials (fEPSPs) before and after cFC. After cFC, the commissural pathway’s synaptic strength was potentiated. Although recordings were conducted during the wake phase of the light/dark cycle, the mice slept more in the post-conditioning period than in the pre-conditioning period. Relative to awake periods, in non-rapid eye movement (NREM) sleep the fEPSPs were larger in both pre- and post-conditioning periods. Therefore, to avoid sleep-related fEPSP changes confounding the effects of cFC learning, we accounted for the effects of sleep and still found long-term potentiation of the commissural pathway, but no significant long-term depression. Synaptic strength changes were not found in the no-shock, control group that simply explored the fear-conditioning chamber, indicating that exploration of the novel place did not produce the measurable effects caused by cFC. These results show that following cFC, the CA1 commissural pathway is potentiated, likely contributing to the functional integration of the left and right hippocampi in fear memory consolidation. In addition, the cFC paradigm produces significant changes in an animal’s behavioral state, which are observable as proximal changes in sleep patterns.
A limbic circuit selectively linking active escape to food suppression

Stress and anxiety are precipitating factors for eating disorders, but the neural basis linking stress to alterations in feeding is not well understood. Here we describe a novel population of stress-responsive neurons in the lateral septum (LS) of mice that express neurotensin (LSNTS) in a sexually dimorphic, estrous cycle-dependent manner. We used in vivo imaging to show that LSNTS neurons are activated by stressful experiences when flight is a viable option, but not by a stressful experience associated with freezing or immobility. LSNTS activation leads to a decrease of food intake and body weight in mice, without altering locomotion or other behaviors associated with anxiety. Molecular profiling of LSNTS neurons showed that these neurons co-express Glp1r (glucagon-like peptide 1 receptor), and both pharmacologic and genetic manipulations of Glp1r signaling in the LS recapitulates the behavioral effects of LSNTS activation. Finally, we mapped the outputs of LSNTS neurons and show that activation of LSNTS nerve terminals in the lateral hypothalamus (LH), a well-established feeding center, also decrease food intake. Taken together, these results show that LSNTS neurons link stress and anorexia via effects on hypothalamic pathways regulating food intake.