Miracle-dz/UniFAR-FTUs huggingface dataset:
Response to Long-Term Growth Hormone Therapy in Short Children with Reduced GH Bioactivity

Background/Aims: The aim of the present study was to investigate whether short children with normal growth hormone (GH) immunoreactivity, but reduced bioactivity (bioinactive GH) could benefit from rhGH treatment as GH deficient (GHD) patients. Methods: We evaluated 12 pre-pubertal children (8 M, 4 F), with GH deficiency-like phenotype showing normal serum GH peak levels (>10 ng/ml), measured by immunofluorimetric assay (IFMA-GH), in contrast with a reduced GH bioactivity (bio-GH), evaluated using the Nb2 cells. We also evaluated 15 age-matched GHD pre-pubertal children (11 M, 4 F) with serum GH peak <5 ng/ml. Both groups were treated with rhGH therapy at the dose of 0.23 mg/kg/week s.c. Results: Serum bio-GH/IFMA-GH ratio at peak time for each patient during the provocative test was significantly lower in bioinactive GH than in GHD children (0.29 vs. 2.05, p = 0.00001). Recombinant human GH therapy induced a significant (p < 0.001) increase in growth rate in both groups during the first 2 years. In the third year of treatment, while growth rate in GHD children is maintained, in bioinactive GH patients it decreases remaining, however higher compared to the pre-treatment one. Conclusions:Short rhGH therapy given to selected bioinactive GH children improve growth rate and might result in greater final adult height.
Prevalence of a Septicemia Disease in the Crested Ibis (Nipponia nippon) in China

Abstract This study investigated six cases of septicemia in young crested ibises (Nipponia nippon). These birds all died with similar clinical signs, including sudden death, anorexia, diarrhea, and lameness. Immediately after death, the birds were necropsied; a blood sample was taken from heart and tissues were sampled from liver, lung, spleen, peritoneal mucus, and feces for bacteriologic examination. Anatomic observation showed that the main findings common to the sick birds were arthrocele, associated with congestion in the femur, tibiotarsus, and ventral side; swelling in the liver; hemorrhagic pericarditis; miliary tubercles in lung; and fibrous tubercles in the synovial capsule of the knee joint with suppurative abscesses. Through bacterial examination, the colonial type of Escherichia coli strain was represented prominently in cultures of the feces, heart blood, liver, lung, spleen, suppurative mucus of the synovial capsule, and peritoneal exudate. These symptoms suggested that the death of a number of endangered crested ibis within a short period was evidence of septicemia. The bacterial inoculation tests were also conducted using domestic pigeon, native chicken, and mice for the presence of and infection with E. coli. The study provided indications of the possible role of E. coli strains as bird pathogens and a potential risk in endangered species. Further work is needed to characterize E. coli strains and the toxin production in this bird. This disease occurrence also adds a note of caution to the continued efforts and interest in the reintroduction of the ibis back into its former wild ranges to ensure that formerly captive individuals do not transmit disease to the wild populations of its own or other sympatric species.
Aldosterone escape during ACE inhibitor therapy in chronic heart failure.

In the setting of chronic heart failure (CHF), therapy with angiotensin converting enzyme (ACE) inhibitors generally reduces serum aldosterone levels acutely. However, long-term ACE inhibition is associated with aldosterone suppression that is weak, variable, and unsustained, i.e. aldosterone 'escape'. Magnesium loss caused by aldosterone and by diuretics can contribute to coronary artery spasm and arrhythmias. Aldosterone can block noradrenaline uptake by the myocardium; extracellular catecholamines may lead to arrhythmias and ischaemia. Aldosterone has been shown to have an acute arrhythmogenic effect as well as a potential detrimental effect on baroreflex function, a marker of prognosis in CHF. Both angiotensin II and aldosterone may stimulate myocardial fibrosis, which is associated with a higher incidence of malignant ventricular arrhythmias. ACE inhibition initiated early in the progression of CHF may prevent development of patchy myocardial fibrosis and its inherent arrhythmias and thus reduce the incidence of sudden death. Spironolactone therapy added to the regimen of an ACE inhibitor and diuretic can induce natriuresis and magnesium retention, increase myocardial noradrenaline uptake, and reduce the incidence of arrhythmias.
Conservation planning for freshwater–marine carryover effects on Chinook salmon survival

Abstract Experiences of migratory species in one habitat may affect their survival in the next habitat, in what is known as carryover effects. These effects are especially relevant for understanding how freshwater experience affects survival in anadromous fishes. Here, we study the carryover effects of juvenile salmon passage through a hydropower system (Snake and Columbia rivers, northwestern United States). To reduce the direct effect of hydrosystem passage on juveniles, some fishes are transported through the hydrosystem in barges, while the others are allowed to migrate in‐river. Although hydrosystem survival of transported fishes is greater than that of their run‐of‐river counterparts, their relative juvenile‐to‐adult survival (hereafter survival) can be less. We tested for carryover effects using generalized linear mixed effects models of survival with over 1 million tagged Chinook salmon, Oncorhynchus tshawytscha (Walbaum) (Salmonidae), migrating in 1999–2013. Carryover effects were identified with rear‐type (wild vs. hatchery), passage‐type (run‐of‐river vs. transported), and freshwater and marine covariates. Importantly, the Pacific Decadal Oscillation (PDO) index characterizing cool/warm (i.e., productive/nonproductive) ocean phases had a strong influence on the relative survival of rear‐ and passage‐types. Specifically, transportation benefited wild Chinook salmon more in cool PDO years, while hatchery counterparts benefited more in warm PDO years. Transportation was detrimental for wild Chinook salmon migrating early in the season, but beneficial for later season migrants. Hatchery counterparts benefited from transportation throughout the season. Altogether, wild fish could benefit from transportation approximately 2 weeks earlier during cool PDO years, with still a benefit to hatchery counterparts. Furthermore, we found some support for hypotheses related to higher survival with increased river flow, high predation in the estuary and plume areas, and faster migration and development‐related increased survival with temperature. Thus, pre‐ and within‐season information on local‐ and broad‐scale conditions across habitats can be useful for planning and implementing real‐time conservation programs.
The anatomy of Russia’s grip on Armenia: bound to persist?

The 2018 “Velvet revolution” in Armenia has engendered a bunch of unanswered questions regarding both its domestic as well as foreign policy implications. Given the newly-elected prime minister’s critical stances on Armenia’s plight in the Russia-led unions, it is easy to resort to speculations about possible foreign policy changes. This study analyses the anatomy of Russia’s powerful grip on Armenia, with a focus on country’s huge economic dependence on Russia, the “frozen” Nagorno-Karabakh conflict, as well as Kremlin’s traditional special ties with Armenian incumbents. Even though a breakthrough on reducing the enormous asymmetry in Armenian-Russian relations is unlikely anytime soon, owing to its vast legitimacy the new Armenian government may well reinforce its agency. That said, in theory it has an opportunity to cut back the heavy reliance on Kremlin’s overwhelming political and economic support and somewhat rectify its compliant foreign policy behavior. Yet, further research is essential for in-depth analysis of ruling elite’s interactions with Kremlin.
Distribution and Genetic Diversity of the ABC Transporter Lipoproteins PiuA and PiaA within Streptococcus pneumoniae and Related Streptococci

ABSTRACT Streptococcus pneumoniae is a major cause of morbidity and mortality worldwide. The existence of approximately 90 antigenically distinct capsular serotypes has greatly complicated the development of an effective pneumococcal vaccine. Virulence-associated proteins common and conserved among all capsular types now represent the best strategy to combat pneumococcal infections. PiuA and PiaA are the lipoprotein components of two pneumococcal iron ABC transporters and are required for full virulence in mouse models of infection. Here we describe a study of the distribution and genetic diversity of PiuA and PiaA within typical and atypical S. pneumoniae, Streptococcus oralis, and Streptococcus mitis strains. The genes encoding both PiuA and PiaA were present in all typical pneumococci tested, (covering 20 and 27 serotypes, respectively). The piuA gene was highly conserved within the typical pneumococci (0.3% nucleotide divergence), but was also present in “atypical” pneumococci and the closely related species S. mitis and S. oralis, showing up to 10.4% nucleotide divergence and 7.5% amino acid divergence from the typical pneumococcal alleles. Conversely, the piaA gene was found to be specific to typical pneumococci, 100% conserved, and absent from the oral streptococci, including isolates of S. mitis known to possess pneumolysin and autolysin. These are desirable qualities for a vaccine candidate and as a diagnostic tool for S. pneumoniae.
Evaluation of Two Matrices for Long-Term, Ambient Storage of Bacterial DNA.

BACKGROUND Culture-independent molecular analyses allow researchers to identify diverse microorganisms. This approach requires microbiological DNA repositories. The standard for DNA storage is liquid nitrogen or ultralow freezers. These use large amounts of space, are costly to operate, and could fail. Room temperature DNA storage is a viable alternative. In this study, we investigated storage of bacterial DNA using two ambient storage matrices, Biomatrica DNAstable® Plus and GenTegra® DNA. METHODS We created crude and clean DNA extracts from five Streptococcus pneumoniae isolates. Extracts were stored at -30°C (our usual DNA storage temperature), 25°C (within the range of temperatures recommended for the products), and 50°C (to simulate longer storage time). Samples were stored at -30°C with no product and dried at 25°C and 50°C with no product, in Biomatrica DNAstable Plus or GenTegra DNA. We analyzed the samples after 0, 1, 2, 4, 8, 16, 32, and 64 weeks using the Nanodrop 1000 to determine the amount of DNA in each aliquot and by real-time PCR for the S. pneumoniae genes lytA and psaA. Using a 50°C storage temperature, we simulated 362 weeks of 25°C storage. RESULTS The average amount of DNA in aliquots stored with a stabilizing matrix was 103%-116% of the original amount added to the tubes. This is similar to samples stored at -30°C (average 102%-121%). With one exception, samples stored with a stabilizing matrix had no change in lytA or psaA cycle threshold (Ct) value over time (Ct range ≤2.9), similar to samples stored at -30°C (Ct range ≤3.0). Samples stored at 25°C with no stabilizing matrix had Ct ranges of 2.2-5.1. CONCLUSION DNAstable Plus and GenTegra DNA can protect dried bacterial DNA samples stored at room temperature with similar effectiveness as at -30°C. It is not effective to store bacterial DNA at room temperature without a stabilizing matrix.
Targeting B lymphocyte stimulator in systemic lupus erythematosus and other autoimmune rheumatic disorders

B lymphocyte stimulator (BLyS) is a vital B cell survival factor. Overexpression of BLyS in mice can lead to systemic lupus erythematosus (SLE)-like disease and to Sjögren’s syndrome (SS)-like disease. Treatment of mice with established SLE with BLyS antagonists ameliorates disease progression and enhances survival. Moreover, similar treatment of mice with inflammatory arthritis ameliorates the ongoing inflammation and subsequent joint destruction. In humans, BLyS overexpression is common in patients with SLE, rheumatoid arthritis or SS. Results from a Phase I clinical trial with a BLyS antagonist in human SLE have shown the antagonist to be biologically active and safe. These features collectively point to BLyS as an attractive therapeutic target in human disease.
Differential Effects of Atrial Natriuretic Peptide on the Brain Water and Sodium after Experimental Cortical Contusion in the Rat

Atrial natriuretic peptide (ANP) plays an important role in the regulation of water and sodium in the body via cyclic GMP (cGMP) pathway. Although ANP has been shown to be protective in cerebral ischemia or intracerebral hemorrhage, its role in traumatic brain injury (TBI) has yet to be elucidated. We herein assessed ANP effects on brain water and sodium in TBI. Controlled cortical impact (3 mm depth, 6 m/sec) was used to induce an experimental cortical contusion in rats. Continuous administration of ANP 0.2 (n = 6) or 0.7 μg/kg/24 h (n = 6), cGMP analogue (8-Bromo-cGMP) 0.1 (n = 5) or 0.3 mg/kg/24 h (n = 5), or vehicle (n = 6) was begun 15 minutes after injury, using a mini-osmotic pump implanted into the peritoneal cavity. At 24 hours after injury, ANP significantly exacerbated brain edema in the injured hemisphere in a dose-dependent manner while it reduced brain sodium concentrations in both hemispheres. These ANP effects could be mimicked by a cGMP analogue. In the second series (n = 20), BBB integrity was assessed by evaluating the extravasation of Evans blue dye. ANP or cGMP analogue significantly worsened BBB disruption in the injured hemisphere at 24 hours after injury. These findings suggest that ANP administration exacerbates brain edema after the experimental cortical contusion in rats, possibly because of an increase in the BBB permeability via cGMP pathway, whereas it reduces brain sodium levels.
Statistical and Graphical Assessment of Circumferential and Radial Hardness Variation of AISI 4140, AISI 1020 and AA 6082 Aluminum Alloy

Hardness homogeneity of the commonly used structural ferrous and nonferrous engineering materials is of vital importance in the design stage, therefore, reliable information regarding material properties homogeneity should be validated and any deviation should be addressed. In the current study the hardness variation, over wide spectrum radial locations of some ferrous and nonferrous structural engineering materials, was investigated. Measurements were performed over both faces (cross-section) of each stock bar according to a pre-specified stratified design, ensuring the coverage of the entire area both in radial and circumferential directions. Additionally the credibility of the apparatus and measuring procedures were examined through a statistically based calibration process of the hardness reference block. Statistical and response surface graphical analysis are used to examine the nature, adequacy and significance of the measured hardness values. Calibration of the apparatus reference block proved the reliability of the measuring system, where no strong evidence was found against the stochastic nature of hardness measures over the various stratified locations. Also, outlier elimination procedures were proved to be beneficial only at fewer measured points. Hardness measurements showed a dispersion domain that is within the acceptable confidence interval. For AISI 4140 and AISI 1020 steels, hardness is found to have a slight decrease trend as the diameter is reduced, while an opposite behavior is observed for AA 6082 aluminum alloy. However, no definite significant behavior was noticed regarding the effect of the sector sequence (circumferential direction).
Demand Response Scheduling by Stochastic SCUC

Considerable developments in the real-time telemetry of demand-side systems allow independent system operators (ISOs) to use reserves provided by demand response (DR) in ancillary service markets. Currently, many ISOs have designed programs to utilize the reserve provided by DR in electricity markets. This paper presents a stochastic model to schedule reserves provided by DR in the wholesale electricity markets. Demand-side reserve is supplied by demand response providers (DRPs), which have the responsibility of aggregating and managing customer responses. A mixed-integer representation of reserve provided by DRPs and its associated cost function are used in the proposed stochastic model. The proposed stochastic model is formulated as a two-stage stochastic mixed-integer programming (SMIP) problem. The first-stage involves network-constrained unit commitment in the base case and the second-stage investigates security assurance in system scenarios. The proposed model would schedule reserves provided by DRPs and determine commitment states of generating units and their scheduled energy and spinning reserves in the scheduling horizon. The proposed approach is applied to two test systems to illustrate the benefits of implementing demand-side reserve in electricity markets.
Cooperativity mutants of bacteriophage lambda cI repressor: temperature dependence of self-assembly.

Analytical ultracentrifugation was used to study higher order self-assembly of lambda cI repressors, including eight mutants whose monomer to dimer reactions were recently characterized [Burz et al. (1994) Biochemistry 33, 8399]. Six of the mutants were found to remain dimeric up to 50 microM total protein; the remaining mutants (EK102 and PT158) were found to undergo higher order oligomerization, as does wild-type cI. For these three repressors, we determined the stoichiometries and energetics of higher order assembly over the temperature range 5-40 degrees C. Weak dimerization exhibited by two other mutants, SN228 and SR228, was also evaluated by sedimentation equilibrium over this same temperature range. The end-state for higher order assembly of wild-type cI was determined to be octameric, in agreement with Senear et al. [(1993) Biochemistry 32, 6179-6189]. The assembly free energies resolved by the sedimentation analysis program NONLIN [Johnson, M. L. , et al. (1981) Biophys. J. 36, 575-588] leads to the prediction that tetramers may contribute significantly to the intermediate populations during assembly. This analysis of the species populations is in accord with recent conclusions from fluorescence anisotropy studies [Banik et al. (1993) J. Biol. Chem. 268, 3938]. It was found that two of the mutant repressors (EK102 and PTI58) assemble into octamers, but with differing possible intermediates. PT158 satisfies the stoichiometry 8M1 <--> 2M4 <--> M8, while the EK102 data conforms to a 4M2 <--> 2M4 <--> M8 model, similar to WT (both the EK102 and WT data could also be described by a dimer-octamer model with no intermediates). Of the six repressors found in this study to remain dimeric, three exhibit non-cooperative DNA binding (GD147, KN192, YH210), two express intermediate cooperativity (EK188, SR228), and one is fully cooperative (SN228). The three octamerizing repressors are fully cooperative [Burz & Ackers (1994) Biochemistry 33, 8399], suggesting a correlation between their ability to form higher order assemblies and to engage in cooperative DNA binding. Linear van't Hoff plots were obtained for overall assembly of wild-type and EK102 dimers, while that of PT158 monomers was curved, indicating a negative heat capacity change. The van't Hoff analyses of dimerization constants for SN228 and SR228 were distinctly different from each other and also from that of wild type; such differences might be related to the disparate cooperative behavior found previously for these mutants (Burz & Ackers, 1994).
Effect of Mannitol on Postreperfusion Cardiac Output and Central Venous Oxygen Saturation during Orthotopic Liver Transplant: A Double-Blind Randomized Clinical Trial

Context Attenuating postreperfusion syndrome during orthotopic liver transplant is very important for transplant anesthesiologists because of the syndrome's complications. Oxygen-derived free radicals play an important role in the genesis of postreperfusion syndrome, but the effect of mannitol (a free radical scavenger) on attenuating the syndrome is unclear. Objectives To investigate the effectiveness of infusing mannitol during the anhepatic phase in preventing postreperfusion syndrome, as indicated by postreperfusion cardiac output and central venous oxygen saturation. Design In a randomized clinical trial, 53 patients who had undergone orthotopic liver transplant were allocated to 2 groups. During the anhepatic phase, patients in the mannitol group received 1g/kg mannitol, whereas those in the control group received physiological saline. Mean arterial pressure, cardiac output, and central venous oxygen saturation were measured before and after the portal vein was declamped. Serum levels of sodium and potassium were recorded at baseline and after portal vein declamping. Setting Shiraz Organ Transplant Center, Shiraz, Iran. Results In the mannitol group, no significant change was found in mean arterial pressure, cardiac output, and central venous oxygen saturation before and after declamping of the portal vein (P= .78, P= .59, and P= .83, respectively). However, after declamping in the control group, mean arterial pressure, cardiac output, and central venous oxygen saturation were significantly lower than before declamping (P= .003, P= .001, and P <.001, respectively). No significant change in serum levels of sodium and potassium from baseline to after declamping were found in either group. Conclusion Infusion of mannitol 1 g/kg during the anhepatic phase was effective in attenuating postreperfusion syndrome without stress about hyperkalemia or hyponatremia during anesthesia.
Communicating SHCI Research to Practitioners and Stakeholders

Introduction A decade has passed since the field of SHCI (Sustainable Human-Computer Interaction) emerged (Blevis 2007; Mankoff et al. 2007), and numerous contributions to research have been made by the community. Alongside these considerable academic contributions, many members of the SHCI community have expanded their aspirations to include influencing broader environmental sustainability movements and communities. SHCI researchers have noted opportunities to communicate our work related to topics data centers (e.g., Preist et al., 2016), eco-feedback systems (e.g., Froehlich et al., 2010), or electronics waste (e.g., Remy et al., 2015). But HCI as a broad academic discipline has a long-standing “theory-practice gap” (Rogers 2004; Roedl & Stolterman, 2013), which suggests that HCI researchers struggle to communicate their work to non-academic stakeholders and practitioners. This is the focus of our chapter. We raise the question of what the limitations of SHCI’s current research are in bridging this gap, particularly in our approach to communicating research contributions to stakeholders outside of the SHCI community. The term “stakeholders” is used frequently in SHCI to refer to parties of interest outside of the field; they can be designers, manufacturers, policymakers, educators, or even the broad audience of “users” of a system. In this chapter, we aim to take a closer look at those groups, in particular focusing on communities SHCI has yet to properly engage with. Learning to communicate with those diverse stakeholders is an important challenge for SHCI researchers, especially for those who wish to bridge the theory-practice gap. Oftentimes, SHCI researchers aim not simply to advance technology, but to contribute to a sustainable future—a time-sensitive and complex issue that necessitates co-operation, coordination and communication amongst many diverse stakeholders.