Miracle-dz/UniFAR-FTUs huggingface dataset:
Lipid-chitosan hybrid nanoparticles for controlled delivery of cisplatin

Abstract Lipid-polymer hybrid nanoparticles (LPHNP) are delivery systems for controlled drug delivery at tumor sites. The superior biocompatible properties of lipids and structural advantages of polymers can be obtained using this system for controlled drug delivery. In this study, cisplatin-loaded lipid-chitosan hybrid nanoparticles were formulated by the single step ionic gelation method based on ionic interaction of positively charged chitosan and negatively charged lipid. Formulations with various chitosan to lipid ratios were investigated to obtain the optimal particle size, encapsulation efficiency, and controlled release pattern. Transmission electron microscope and dynamic light scattering analysis demonstrated a size range of 181–245 nm and a zeta potential range of 20–30 mV. The stability of the formulation was demonstrated by thermal studies. Cytotoxicity and cellular interaction of cisplatin-loaded LPHNP were investigated using in vitro cell-based assays using the A2780 ovarian carcinoma cell line. The pharmacokinetics study in rabbits supported a controlled delivery of cisplatin with enhanced mean residence time and half-life. These studies suggest that cisplatin loaded LPHNP have promise as a platform for controlled delivery of cisplatin in cancer therapy.
Euskarazko egitura sintaktiko konplexuen analisirako eta testuen sinplifikazio automatikorako proposamena

In this thesis we have paved the way for the automatic readability assessment and text simplification in the automatic processing of Basque. In order to analyse the complexity of the texts, we have considered the works for other languages targeted to automatic text simplification and we have performed linguistic analyses in Basque corpora. Based on these analysis we have set the linguistic foundations to simplify texts automatically. To assess the readability of the texts automatically, we have implemented ErreXail, a system based on linguistic features that uses machine learning techniques. To simplify texts automatically, we have defined the operations that the text simplification system EuTS should perform and we have connected them with the modules of the architecture. We have also provided the linguistic information these modules need. As case study, we have implemented a multilingual tool that simplifies parenthetical structures containing biographical information, and we have shown that the results of the linguistic analysis for Basque are also useful for other languages. To contrast our corpus-study-based approach, we have created the ETSC-CBST corpus that contains original and simplified texts. To make the comparison among different approaches, we have defined an annotation scheme. The English summary of this report can be found at http://ixa.eus/Ixa/Argitalpenak/Tesiak/1462951351/publikoak/english_report.
Xanthomatous hypophysitis: A rare case report with review of literature

Hypophysitis is classified into primary and secondary. Xanthomatous hypophysitis is one of the rare types of primary hypophysitis. A 55-year-old female presented with headache, vomiting, and blurring of vision. She also had endocrine dysfunction in the form of low serum T3, T4, and low cortisol levels. MRI scan showed a sellar expansile lesion suggestive of pituitary macroadenoma. Microscopy showed pituitary tissue replaced by inflammatory infiltrate made up of foamy histiocytes arranged in sheets along with lymphoplasmacytic infiltrate. Interspersed areas of fibrosis, hyalinization, few congested and sclerosed blood vessels were seen. Compressed residual pituitary tissue was identified at the periphery. Xanthomatous hypophysitis is a rare entity which can mimic as pituitary adenoma both clinically and radiologically. Accurate diagnosis at an early stage with postsurgical steroid therapy may help to prevent permanent pituitary damage.
A multiparameter model for non-invasive detection of hypoglycemia

Objective: Severe hypoglycemia is the most serious acute complication for people with type 1 diabetes (T1D). Approximately 25% of people with T1D have impaired ability to recognize impending hypoglycemia, and nocturnal episodes are feared. Approach: We have investigated the use of non-invasive sensors for detection of hypoglycemia based on a mathematical model which combines several sensor measurements to identify physiological responses to hypoglycemia. Data from randomized single-blinded euglycemic and hypoglycemic glucose clamps in 20 participants with T1D and impaired awareness of hypoglycemia was used in the analyses. Main results: Using a sensor combination of sudomotor activity at three skin sites, ECG-derived heart rate and heart rate corrected QT interval, near-infrared and bioimpedance spectroscopy; physiological responses associated with hypoglycemia could be identified with an F1 score accuracy up to 88%. Significance: We present a novel model for identification of non-invasively measurable physiological responses related to hypoglycemia, showing potential for detection of moderate hypoglycemia using a wearable sensor system.
A systematic review and meta-analysis of the Test of Memory Malingering in adults: Two decades of deception detection

Abstract Objective: The present study, adhering to Preferred Reporting Items for Systematic review and Meta-Analyses (PRISMA) guidelines, is the first systematic review and meta-analysis of the Test of Memory Malingering (TOMM) to examine traditional and alternative cutoffs across Trial 1, Trial 2, and Retention. Method: Search criteria identified 539 articles published from 1997 to 2017. After application of selection criteria, 60 articles were retained for meta-analysis. Classification accuracy statistics were calculated using fixed- and random-effects models. Results: For Trial 1, a cutoff of <42 was found to result in the highest sensitivity value (0.59–0.70) when maintaining specificity at ≥0.90. Traditional cutoffs for Trial 2 and Retention were highly specific (0.96–0.98) and moderately sensitive (0.46–0.56) when considering all available studies and only neurocognitive/psychiatric samples classified by known-groups design. For both trials, a modified cutoff of <49 allowed for improved sensitivity (0.59–0.70) while maintaining adequate specificity (0.91–0.97). A supplementary review revealed that traditional TOMM cutoffs produced >0.90 specificity across most samples of examinees for whom English is not the primary language, but well-below acceptable levels in individuals with dementia. Conclusions: The TOMM is highly specific when interpreted per traditional cutoffs. In individuals not suspected of significant impairment, findings indicate that a less conservative TOMM Trial 2 or Retention cutoff of <49 can be interpreted as invalid, especially in settings associated with higher base rates of invalidity and, thus, higher positive predictive power. A cutoff of <42 on Trial 1 can also be interpreted as invalid in most settings.
A LITERATURE REVIEW: EFFICIENT VM MIGRATION TECHNIQUES FOR ENERGY REDUCTION IN CLOUD COMPUTING

: Broadly speaking cloud computing is nothing but a highly ‘utilitarian’ orientation of IT services where users benefited on a pay-as-you go basis. In a way it enables the hosting of pervasive applications from consumer, scientific and business domain. We expect all electronic gadgetry to be ‘energy efficient’ to possibly achievable limits. So our data centers hosting cloud application must be cost effective and the same time should avoid undue burden of carbon footprint. While excising economy on power consumption by (data center) outmost care needs to be taken so that it never at the cost services provided to end user i.e. SLA violation must be kept as low as possible. Virtualization technology is one of the key features in cloud data centers that can improve the efficiency of hardware utilization through resource sharing, migration, and consolidation of workloads. In this paper we shall cover VM Migration Algorithms for energy reduction in cloud computing along with other novel techniques.
Physiological and Dietary Determinants of Iron Status in Spanish Vegetarians

Vegetarian diets may compromise iron status, as they provide non-haem iron which has low bioavailability. Spanish lacto-ovo vegetarians (n = 49) and vegans (n = 55) were recruited and haematological and biochemical iron parameters were analysed. Food and supplements consumption, body composition, physical activity, menstrual blood losses and hormonal contraceptive use were assessed. Four groups were studied: Iron deficiency anaemia (IDA), iron depletion (ferritin <15 ng/mL), iron deficiency (ferritin ≥15 to ≤30 ng/mL), and iron sufficiency (ferritin >30 ng/mL). IDA was uncommon (n = 5, 4.8%), 27.9% of participants were iron-depleted, and 30.8% were iron-deficient. Serum ferritin was lower in women than men (p < 0.001) and IDA and iron depleted individuals were all women. There were no differences attributed to diet type, time being vegetarian or physical activity. The menstrual period length was negatively associated with transferrin saturation (ρ = −0.364, p = 0.001) and hormonal contraceptive use (ρ = −0.276, p = 0.014). Iron supplements were consumed most frequently by IDA and iron-deficient subjects (p = 0.031). Conclusions: Iron status did not vary between lacto-ovo vegetarians and vegans and there was not an influence of the time following a vegetarian diet. Although men were iron-sufficient, iron deficiency was frequent in women, who should apply strategies to increase iron bioavailability, especially if they experience intense menstrual blood losses.
Season, Age and Sex-Related Differences in Incidental Magnetic Resonance Imaging Findings of Paranasal Sinuses in Adults.

Objective The purpose of the current study was to investigate the prevalence of incidental paranasal sinus abnormalities on brain magnetic resonance imaging (MRI). We also aimed to assess the season, the age and sex-related differences in the frequencies of these abnormalities. Methods Paranasal sinus cavities of 839 patients who underwent brain MRI for suspected intracranial pathology were retrospectively evaluated for the presence of incidental abnormalities. Two study groups were established according to the season in which the MRI examinations were performed, and the prevalences of the incidental sinusal abnormalities in both winter and summer were calculated. The relation of the incidental sinusal abnormalities to age and sex were also analyzed. Results Of the 839 patients, 45.5% showed one or more sinusal abnormalities. The prevalence of the sinusal abnormalities was significantly higher in winter (50.6%) than in summer (40.3%) (p=0.003). While sphenoidal sinus lesions did not show significant seasonality (p>0.05), frontal, maxillary and ethmoidal sinus lesions were significantly more common in winter than in summer (p<0.05). In both summer and winter, incidental sinusal abnormalities among men were significantly higher than among women (p values of 0.013 and 0.033, respectively). There was no significant relationship between incidental sinus abnormalities and age in either season (p>0.05). Conclusion Paranasal sinus abnormality is a frequent incidental brain MRI finding which is more commonly detected in winter. Awareness of incidental paranasal sinus abnormalities and knowledge of its frequency contribute positively to clinical applications.
A cytohistological correlation in salivary gland swelling with special reference to the proposed Milan system

Context and Background: Cytological grading of salivary gland lesion, which is a simple, cost-effective, and reproducible method, can be used as a tool for the selection of treatment modality. The proposed Milan classification establishes one guideline for reporting of salivary gland cytology and thus helps in individualized treatment and follow-up. Aims and Objectives: (1) The aims and objectives of this study were to establish the validity and reliability of the Milan classification of cytological grading in salivary gland swelling and (2) to calculate the malignancy risk. Materials and Methods: This prospective study was designed in clinically diagnosed salivary gland swelling at the Department of Pathology of a tertiary care referral hospital. Fine-needle aspiration (FNA) was done, and stained smears were examined under light microscope and cytological findings were noted according to the Milan classification. Tissue for the histopathological study was obtained in 119 cases. The previous cytological findings were compared to subsequent histopathology report. Results: Among 119 FNAs, 2.5% were nondiagnostic and 55.4% were nonneoplastic. While no samples were placed in the atypia of undetermined significance category, benign tumors accounted for 25.2%. About 1.7% was grouped in the salivary gland neoplasm of uncertain malignant potential, 2.5% of cases were categorized as suspicious of malignancy, and 12.6% of cases comprised as malignant tumors. Overall, malignancy risk was observed to be the highest (93.3%) in Category 6 and lowest (3.0%) in nonneoplastic category. Conclusions: The six-tier diagnostic categories of the Milan classification scheme help in segregating patients with salivary gland lesions into the management categories of follow-up, conservative surgery, and radical surgery with/without chemotherapy.
Solvent-Free Preparation of 1,8-Dioxo-Octahydroxanthenes Employing Iron Oxide Nanomaterials

In this study, 1,8-dioxo-octahydroxanthenes were prepared employing a simple, effective and environmentally sound approach utilizing an iron oxide nanocatalyst under solventless conditions. The proposed iron oxide nanomaterial exhibited high product yields, short reaction times and a facile work-up procedure. The synthesized catalyst was also found to be highly stable and reusable under the investigated conditions (up to twelve consecutive cycles) without any significant loss in its catalytic activity.
Site Selective and Efficient Spin Labeling of Proteins with a Maleimide-Functionalized Trityl Radical for Pulsed Dipolar EPR Spectroscopy

Pulsed dipolar electron paramagnetic resonance spectroscopy (PDS) in combination with site-directed spin labeling (SDSL) of proteins and oligonucleotides is a powerful tool in structural biology. Instead of using the commonly employed gem-dimethyl-nitroxide labels, triarylmethyl (trityl) spin labels enable such studies at room temperature, within the cells and with single-frequency electron paramagnetic resonance (EPR) experiments. However, it has been repeatedly reported that labeling of proteins with trityl radicals led to low labeling efficiencies, unspecific labeling and label aggregation. Therefore, this work introduces the synthesis and characterization of a maleimide-functionalized trityl spin label and its corresponding labeling protocol for cysteine residues in proteins. The label is highly cysteine-selective, provides high labeling efficiencies and outperforms the previously employed methanethiosulfonate-functionalized trityl label. Finally, the new label is successfully tested in PDS measurements on a set of doubly labeled Yersinia outer protein O (YopO) mutants.
Evaluation of the Gradient Concentration Strip Method for Antifungal Susceptibility Testing of Isavuconazole and Comparators for Mucorales Species

MIC values for amphotericin B and three azoles determined by the EUCAST reference technique and by gradient concentration strips were compared for 30 Mucorales isolates belonging to clinically important species. Essential agreement (EA) within ±2 dilution steps at 24 hours between the techniques was 83.3% for isavuconazole. EAs for itraconazole, amphotericin B, and posaconazole were 86.7%, 73.3%, and 56.7%, respectively. ABSTRACT MIC values for amphotericin B and three azoles determined by the EUCAST reference technique and by gradient concentration strips were compared for 30 Mucorales isolates belonging to clinically important species. Essential agreement (EA) within ±2 dilution steps at 24 hours between the techniques was 83.3% for isavuconazole. EAs for itraconazole, amphotericin B, and posaconazole were 86.7%, 73.3%, and 56.7%, respectively. A good agreement was obtained between visual and spectrophotometric readings for EUCAST.
Distributed Optimization for Control

Advances in wired and wireless technology have necessitated the development of theory, models, and tools to cope with the new challenges posed by large-scale control and optimization problems over networks. The classical optimization methodology works under the premise that all problem data are available to a central entity (a computing agent or node). However, this premise does not apply to large networked systems, where each agent (node) in the network typically has access only to its private local information and has only a local view of the network structure. This review surveys the development of such distributed computational models for time-varying networks. To emphasize the role of the network structure in these approaches, we focus on a simple direct primal (sub)gradient method, but we also provide an overview of other distributed methods for optimization in networks. Applications of the distributed optimization framework to the control of power systems, least squares solutions to linear equations, and model predictive control are also presented.
Cereal B-Glucans: The Impact of Processing and How It Affects Physiological Responses

Cereal β-glucans are dietary fibres primarily found in oats and barley, and have several positive effects on health, including lowering the postprandial glucose response and the improvement of blood cholesterol levels. Cereal β-glucans have a specific combination of β-(1→4) and β-(1→3) linkages into linear long-chain polysaccharides of high molecular weight. Due to their particular structure, cereal β-glucans generate viscosity within the intestinal tract, which is thought to be the main mechanism of action responsible for their positive health effects. However, cereal grains are rarely consumed raw; at least one cooking step is generally required before they can be safely eaten. Cooking and processing methods more generally will modify the physicochemical characteristics of β-glucans, such as molecular weight, extractability and the resulting viscosity. Therefore, the health impact of β-glucans will depend not only on the dose administered, but also on the ways they are processed or converted into food products. This review aims at summarizing the different parameters that can affect β-glucans efficacy to improve glucose and lipid metabolism in humans.
Nitric oxide in the physiology and quality of fleshy fruits.

Fruits are unique to flowering plants and confer a selective advantage as it facilitates seed maturation and dispersal. In fleshy fruits, development and ripening are associated with numerous structural, biochemical and physiological changes, including modifications in the general appearance, texture, flavor and aroma, which ultimately convert immature fruits into a considerably more attractive and palatable structure for seed dispersal animals. Treatment with exogenous nitric oxide (NO) delays fruit ripening, prevents chilling damages, promotes disease resistance and enhances the nutritional value. The ripening process is influenced by NO, which operates antagonistically to ethylene, but it also interacts with other regulatory molecules such as abscisic acid (ABA), auxin, jasmonic acid (JA), salicylic acid (SA), melatonin and hydrogen sulfide (H2S). NO content progressively declines during fruit ripening, with concomitant increases in protein nitration and nitrosation, two post-translational modifications (PTMs) promoted by reactive nitrogen species (RNS). Dissecting the intimate NO interactions with other ripening-associated players, including reactive oxygen species (ROS), antioxidants, and the aforementioned phytohormones, remains a subject of future challenges. In this context, integrative "omics" and gene editing approaches may provide additional knowledge of the impact of NO in the regulatory processes involved in controlling the physiology and quality traits in both climacteric and non-climacteric fruits.
Microtubules in cell migration

Abstract Directed cell migration is critical for embryogenesis and organ development, wound healing and the immune response. Microtubules are dynamic polymers that control directional migration through a number of coordinated processes: microtubules are the tracks for long-distance intracellular transport, crucial for delivery of new membrane components and signalling molecules to the leading edge of a migrating cell and the recycling of adhesion receptors. Microtubules act as force generators and compressive elements to support sustained cell protrusions. The assembly and disassembly of microtubules is coupled to Rho GTPase signalling, thereby controlling actin polymerisation, myosin-driven contractility and the turnover of cellular adhesions locally. Cross-talk of actin and microtubule dynamics is mediated through a number of common binding proteins and regulators. Furthermore, cortical microtubule capture sites are physically linked to focal adhesions, facilitating the delivery of secretory vesicles and efficient cross-talk. Here we summarise the diverse functions of microtubules during cell migration, aiming to show how they contribute to the spatially and temporally coordinated sequence of events that permit efficient, directional and persistent migration.
Differences in Shedding of the Interleukin-11 Receptor by the Proteases ADAM9, ADAM10, ADAM17, Meprin α, Meprin β and MT1-MMP

Interleukin-11 (IL-11) has been associated with inflammatory conditions, bone homeostasis, hematopoiesis, and fertility. So far, these functions have been linked to classical IL-11 signaling via the membrane bound receptor (IL-11R). However, a signaling cascade via the soluble IL-11R (sIL-11R), generated by proteolytic cleavage, can also be induced. This process is called IL-11 trans-signaling. A disintegrin and metalloprotease 10 (ADAM10) and neutrophil elastase were described as ectodomain sheddases of the IL-11R, thereby inducing trans-signaling. Furthermore, previous studies employing approaches for the stimulation and inhibition of endogenous ADAM-proteases indicated that ADAM10, but not ADAM17, can cleave the IL-11R. Herein, we show that several metalloproteases, namely ADAM9, ADAM10, ADAM17, meprin β, and membrane-type 1 matrix metalloprotease/matrix metalloprotease-14 (MT1-MMP/MMP-14) when overexpressed are able to shed the IL-11R. All sIL-11R ectodomains were biologically active and capable of inducing signal transducer and activator of transcription 3 (STAT3) phosphorylation in target cells. The difference observed for ADAM10/17 specificity compared to previous studies can be explained by the different approaches used, such as stimulation of protease activity or making use of cells with genetically deleted enzymes.