Miracle-dz/UniFAR-FTUs huggingface dataset:
The transcription factor gene RDD4 contributes to the control of nutrient ion accumulation in rice.

In this study, we investigated the expression and functions of the transcription factor gene RDD4 (rice Dof daily fluctuations 4), which has sequence similarity to RDD1 that controls nutrient ion accumulation in rice. RDD4 protein was highly accumulated in leaf sheaths and localized to vascular bundles. RDD4-overexpressing plants (RDD4-OX) improved the accumulation of various nutrient ions, irrespective of nutrient concentration in a hydroponic solution. K+ and Cl- deficiencies induced the accumulation of other cations and anions, respectively. Interestingly, in RDD4-OX plants K+ and Cl- deficiencies increased PO4 3- and Mg2+ contents, respectively, despite opposite electric charges. Furthermore, PO4 3- deficiency induced NO3 - and Mg2+ accumulation in RDD4-OX plants. These data show that RDD4 is associated with the control of nutrient ion contents within plants. Also, photosynthetic CO2 assimilation in RDD4-OX plants was higher than in wild-type (WT) plants, although the sizes of shoots and panicles decreased in RDD4-OX plants. Subsequent microarray analysis indicated that OsFWL7, similar to maize CNR1 that negatively regulates plant size, showed the most significant difference in its expression levels between WT and RDD4-OX plants. Based on these results, it is hypothesized that a prominent increase in the OsFWL7 expression reduces plant size in RDD4-OX plants. This article is protected by copyright. All rights reserved.
Penguin Suit and Fetal Position Finite Element Model to Prevent Low Back Pain in Spaceflight.

BACKGROUND: This study aimed to investigate the biomechanical effects of different interventions on astronauts lumbar intervertebral discs in a microgravity environment during spaceflight and in a gravity environment when the astronaut returns.METHODS: A finite element model of the L4L5 lumbar segment was developed with eight loading schemes representing different interventions. The loading schemes included no intervention, wearing a penguin suit, sleeping in a fetal position, wearing a penguin suit combined with sleeping in the fetal position, reclining for 4 or 16 h/d, and maintaining upright posture for 4 or 16 h/d.RESULTS: Without intervention, the microgravity environment led to increased central pore pressure, radial displacement, and water content in the lumbar intervertebral disc. Wearing a penguin suit combined with sleeping in the fetal position can reduce disc pore pressure, axial stress, radial displacement, and water content to 0.156 MPa, 11.50 kPa, 0.538 mm, and 1.390%, respectively. When astronauts return to the gravity environment, staying upright for 4 h can reduce the pore pressure, axial stress, radial displacement, and water content of the intervertebral disc to 0.222 MPa, 10.72 kPa, 0.373 mm, and 0.219%, respectively.CONCLUSION: This study showed that wearing a penguin suit and sleeping in the fetal position both have the potential to protect the lumbar intervertebral disc from the negative effects caused by microgravity. Remaining in the upright posture for 4 h per day may help squeeze out the water in the intervertebral disc safely when astronauts return to the gravity environment.Zhang S, Wang K, Zhu R, Jiang C, Niu W. Penguin suit and fetal position finite element model to prevent low back pain in spaceflight. Aerosp Med Hum Perform. 2021; 92(5):312318.
Neglected human Rickettsia felis infection in Taiwan: A retrospective seroepidemiological survey of patients with suspected rickettsioses

Background Current knowledge on Rickettsia felis infection in humans is based on sporadic case reports. Here we conducted a retrospective seroepidemiological survey of R. felis infection among febrile patients visiting a medical center in Taipei. Methodology/Principal findings A total of 122 patients with suspected rickettsioses presenting with fever of unknown origin (FUO) but tested negative for scrub typhus, murine typhus, or Q fever were retrospectively identified during 2009 to 2010. The archived serum samples were examined for the presence of antibodies against R. felis, Rickettsia japonica, and Rickettsia typhi using microimmunofluorescence (MIF) assay. Serological evidence of Rickettsia exposure was found in 23 (19%, 23/122) patients. Eight patients had antibodies reactive to R. felis, including four with current infection (a ≥4-fold increase in IgG titer between acute and convalescent sera). The clinical presentations of these four patients included fever, skin rash, lymphadenopathy, as well as more severe conditions such as pancytopenia, hepatomegaly, elevated liver enzymes/bilirubin, and life-threatening acute respiratory distress syndrome. One of the patients died after doxycycline was stopped after being tested negative for scrub typhus, Q fever, and murine typhus. Conclusions Rickettsia felis is a neglected flea-borne pathogen in Taiwan, and its infection can be life-threatening. Further prospective studies of the prevalence of R. felis among patients with FUO and compatible clinical manifestations are warranted.
Caenorhabditis elegans PTR/PTCHD PTR-18 promotes the clearance of extracellular hedgehog-related protein via endocytosis

Spatiotemporal restriction of signaling plays a critical role in animal development and tissue homeostasis. All stem and progenitor cells in newly hatched C. elegans larvae are quiescent and capable of suspending their development until sufficient food is supplied. Here, we show that ptr-18, which encodes the evolutionarily conserved patched-related (PTR)/patched domain-containing (PTCHD) protein, temporally restricts the availability of extracellular hedgehog-related protein to establish the capacity of progenitor cells to maintain quiescence. We found that neural progenitor cells exit from quiescence in ptr-18 mutant larvae even when hatched under starved conditions. This unwanted reactivation depended on the activity of a specific set of hedgehog-related grl genes including grl-7. Unexpectedly, neither PTR-18 nor GRL-7 were expressed in newly hatched wild-type larvae. Instead, at the late embryonic stage, both PTR-18 and GRL-7 proteins were first localized around the apical membrane of hypodermal and neural progenitor cells and subsequently targeted for lysosomal degradation before hatching. Loss of ptr-18 caused a significant delay in GRL-7 clearance, causing this protein to be retained in the extracellular space in newly hatched ptr-18 mutant larvae. Furthermore, the putative transporter activity of PTR-18 was shown to be required for the appropriate function of the protein. These findings not only uncover a previously undescribed role of PTR/PTCHD in the clearance of extracellular hedgehog-related proteins via endocytosis-mediated degradation but also illustrate that failure to temporally restrict intercellular signaling during embryogenesis can subsequently compromise post-embryonic progenitor cell function.
Integrating dairy manure for enhanced resource recovery at a WRRF: Environmental life cycle and pilot‐scale analyses

The Twin Falls, Idaho wastewater treatment plant (WWTP), currently operates solely to achieve regulatory permit compliance. Research was conducted to evaluate conversion of the WWTP to a water resource recovery facility (WRRF) and to assess the WRRF environmental sustainability; process configurations were evaluated to produce five resources—reclaimed water, biosolids, struvite, biogas, and bioplastics (polyhydroxyalkanoates, PHA). PHA production occurred using fermented dairy manure. State‐of‐the‐art biokinetic modeling, performed using Dynamita's SUMO process model, was coupled with environmental life cycle assessment to quantify environmental sustainability. Results indicate that electricity production via combined heat and power (CHP) was most important in achieving environmental sustainability; energy offset ranged from 43% to 60%, thereby reducing demand for external fossil fuel‐based energy. While struvite production helps maintain a resilient enhanced biological phosphorus removal (EBPR) process, MgO2 production exhibits negative environmental impacts; integration with CHP negates the adverse consequences. Integrating dairy manure to produce bioplastics diversifies the resource recovery portfolio while maintaining WRRF environmental sustainability; pilot‐scale evaluations demonstrated that WRRF effluent quality was not affected by the addition of effluent from PHA production. Collectively, results show that a WRRF integrating dairy manure can yield a diverse portfolio of products while operating in an environmentally sustainable manner.
T1 dependence of magnetization transfer effect for macromolecules

Poster: "ECR 2017 / C-0827 / T 1 dependence of magnetization transfer effect for macromolecules" by: "T. Sasaki1, Y. Kanazawa1, Y. Matsumoto1, H. Hayashi2, N. Ikemitsu1, T. Usuda1, M. Miyoshi3, M. Harada1; 1Tokushima/JP, 2Tokushima, Tokushima/JP, 3Hino/JP"
Two-Trace Two-Dimensional Correlation Spectroscopy Study of the Crystallization Behavior of Bioplastics

A pair of attenuated total reflection infrared (ATR IR) spectra obtained during the crystallization of bioplastic copolymer poly[(R)-3-hydroxybutyrate-co-(R)-3-hydroxyhexanoate] or PHBHx from the melt by spontaneous cooling were examined using the two-trace two-dimensional correlation spectroscopy (2T2D-COS) analysis. Unlike conventional difference spectra, 2T2D spectra showed unexpected details for the patterns of spectral intensity changes, clearly revealing the existence of two distinct populations of crystalline contributions, attributed to the well-ordered primary crystals and the less ordered secondary crystals, in addition to the amorphous component. The 2T2D spectrum sorts out highly overlapped bands associated with different constituents of the system, based on the fundamental properties and constraint imposed on a pair of spectra. Hetero-mode asynchronous 2T2D correlation analysis between the congested CH–stretching region and better resolved carbonyl-stretching region further indicates that the increase in the intensities of certain methyl and methylene bands during the crystallization process is mostly associated with the growth of the well-ordered primary crystals of PHBHx instead of the formation of the secondary crystals in the confined inter-lamellar space. Graphical Abstract
Accelerated Log-Regularized Convolutional Transform Learning and Its Convergence Guarantee

Convolutional transform learning (CTL), learning filters by minimizing the data fidelity loss function in an unsupervised way, is becoming very pervasive, resulting from keeping the best of both worlds: the benefit of unsupervised learning and the success of the convolutional neural network. There have been growing interests in developing efficient CTL algorithms. However, developing a convergent and accelerated CTL algorithm with accurate representations simultaneously with proper sparsity is an open problem. This article presents a new CTL framework with a $log$ regularizer that can not only obtain accurate representations but also yield strong sparsity. To efficiently address our nonconvex composite optimization, we propose to employ the proximal difference of the convex algorithm (PDCA) which relies on decomposing the nonconvex regularizer into the difference of two convex parts and then optimizes the convex subproblems. Furthermore, we introduce the extrapolation technology to accelerate the algorithm, leading to a fast and efficient CTL algorithm. In particular, we provide a rigorous convergence analysis for the proposed algorithm under the accelerated PDCA. The experimental results demonstrate that the proposed algorithm can converge more stably to desirable solutions with lower approximation error and simultaneously with stronger sparsity and, thus, learn filters efficiently. Meanwhile, the convergence speed is faster than the existing CTL algorithms.
Sustainability in the Australian Health and Physical Education Curriculum: an ecofeminist analysis

ABSTRACT Inspired by the activism of young people in response to growing calls for climate justice, this discussion examines the rich possibilities to more meaningfully engage with the interconnections between human and environmental health in the AC:HPE. We explore how the Sustainability cross-curriculum priority is articulated throughout the Health and Physical Education learning area of the Australian Curriculum (AC:HPE). Adopting an ecofeminist framework based on the work of Val Plumwood, we follow the current of Sustainability as it flows through the AC:HPE, to reveal the limited ways it manifests, as well as the points at which greater inclusion is possible. Given our analysis, we focus on expanding definitions and interconnections in the AC policy language to resituate Sustainability in more ecological and ethical terms, and thereby activate new pedagogical possibilities for teachers and students.
Gender-equal Norway, a reality for all? The views and experiences of immigrants

ABSTRACT Norway is known to be among world leaders in gender equality and this is supported by increasing volumes of research in this field. However, there is sparse empirical evidence about the views and experiences of immigrants on gender equality. Consequently, this study sought to provide an ‘outsider’s perspective’ on gender equality by engaging with immigrants living in Norway. This study presents findings from in-depth interviews with 27 immigrants living in Stavanger, Norway on their views and experiences of gender equality. Data from the interviews were analysed based on the constructivist grounded theory approach. The study’s findings revealed that the participants perceived equal rights at home and in the workplace, through state policies and women’s independence, as major indications of gender equality. Although the study suggests that gender equality appears to flourish in Norway, multiculturalism and feminization emerged as challenges towards achieving gender equality in Norwegian society. To address these challenges, it is important for Norwegian society to acknowledge the existence of multiculturalism and engage with it appropriately.
Accumulation and distribution of Zn and Mn in soybean seeds after nutrient seed priming and its contribution to plant growth under Zn- and Mn-deficient conditions

ABSTRACT Nutrient seed priming is a strategy to increase the seed reserves of mineral nutrients as primary source for mineral nutrition during seedling development and early growth. The present study investigates the effects of zinc (Zn) and manganese (Mn) seed priming on growth and nutritional status of soybean under conditions of Zn and Mn limitation. Nutrient seed priming increased the natural seed reserves for Zn by, approximately, sixfold and by fivefold for Mn; however, 40–60% of the primed nutrients were adsorbed to the seed coat. Zinc seed priming was able to maintain plant growth for 5 weeks in the same way as Zn supply via the nutrient solution. It is concluded that nutrient seed priming offers perspectives to improve seed quality of soybean for early seedling development under limited nutrient supply or availability and needs further investigation on performance under various stress conditions.
Study of nanosecond discharges in H2–air mixtures at atmospheric pressure for plasma assisted combustion applications

This paper presents 2D simulations of nanosecond discharges between two point electrodes for four different H2–air mixtures defined by their equivalence ratios ϕ (i.e. ϕ = 0 , air, ϕ = 0.3 , lean mixture, ϕ = 1 , stoichiometric mixture and ϕ = 1.5 , rich mixture) at atmospheric pressure and at an initial temperature of 1000 K. In a first step, we have shown that the mixture composition has only a very small influence on the discharge dynamics and structure during the streamer phase and up to the formation of the plasma channel between the two point electrodes in H2–air mixtures with ϕ ∈ [ 0 , 1.5 ] . However, as the plasma channel is formed slightly earlier as the equivalence ratio increases, for a given voltage pulse, the duration of the nanosecond spark phase increases as the equivalence ratio increases. As expected, we have shown that excited states of N2 (and in particular N2(A)) and radicals (and in particular O(D), O(P), H and OH) are very efficiently produced during the voltage pulse after the start of the spark phase. After the voltage pulse, and up to 100 ns, the densities of excited states of N2 and of O(D) decrease. Conversely, most of the O(P), H and OH radicals are produced after the voltage pulse due to the dissociative quenching of electronically excited N2. As for radicals, the gas temperature starts increasing after the start of the spark phase. For all studied mixtures, the density of O(P) atoms and the gas temperature reach their maxima after the end of the voltage pulse and the densities of O(P), H and OH radicals and the maximal gas temperature increase as the equivalence ratio increases. We have shown that the production of radicals is the highest on the discharge axis and the distribution of species after the voltage pulse and up to 100 ns has a larger diameter between the electrodes than close to both electrode tips. As for species, the temperature distribution presents two hot spots close to the point electrode tips. The non-uniform distributions of radical densities and gas temperature obtained after the nanosecond voltage pulse provide accurate initial conditions for 2D reactive flow codes to study the combustion ignition on longer timescales and compare with experiments.
Evolutionary simulations clarify and reconcile biodiversity-disturbance models

There is significant geographic variation in species richness. However, the nature of the underlying relationships, such as that between species richness and environmental stability, remains unclear. The stability-time hypothesis suggests that environmental instability reduces species richness by suppressing speciation and increasing extinction risk. By contrast, the patch-mosaic hypothesis suggests that small-scale environmental instability can increase species richness by providing a steady supply of non-equilibrium environments. Although these hypotheses are often applied to different time scales, their core mechanisms are in conflict. Reconciling these apparently competing hypotheses is key to understanding how environmental conditions shape the distribution of biodiversity. Here, we use REvoSim, an individual-based, eco-evolutionary system, to model the evolution of sessile organisms in environments with varying magnitudes and scales of environmental instability. We demonstrate that when environments have substantial permanent heterogeneity, a high level of localized environmental instability reduces biodiversity, whereas in environments lacking permanent heterogeneity, high levels of localized instability increase biodiversity. By contrast, broad-scale environmental instability, acting on the same time scale, invariably reduces biodiversity. Our results provide a new view of the biodiversity–disturbance relationship that reconciles contrasting hypotheses within a single model and implies constraints on the environmental conditions under which those hypotheses apply. These constraints can inform attempts to conserve adaptive potential in different environments during the current biodiversity crisis.
Developmental instability and phenotypic evolution in a small and isolated bear population

We explored fluctuating asymmetry (FA) and morphological integration (MI) in the skull of the small, highly inbred and divergent Apennine bear (Ursus arctos marsicanus), to explore its uniqueness and investigate any potential effects of inbreeding depression. We used 3D geometric morphometrics contrasting Apennine bears with other two large outbred bear populations from Scandinavia and Kamchatka as controls. Shape divergence and variability were explored by a principal component analysis on aligned coordinates of 39 landmarks. Procrustes ANOVA, morphological disparity and the global integration index were used to explore FA, shape variance and MI. By remarking Apennine bears as a highly divergent phenotype, we recorded the highest FA and deviation from self-similarity compared with the other two control populations. We conclude that Apennine bears are likely facing developmental instability as a consequence of inbreeding depression, whereas the divergent trait covariance pattern may represent a potential source of evolutionary novelties. We discuss the implications for the conservation and management of this imperiled taxon.
CLIC1 and CLIC4 mediate endothelial S1P receptor signaling to facilitate Rac1 and RhoA activity and function

S1P-induced motility and adhesion in endothelial cells require the intracellular Cl− channels CLIC1 and CLIC4. S1P signaling CLICs into place The chloride intracellular channels CLIC1 and CLIC4 are implicated in vascular development, particularly in response to oxidative stress. Mao et al. found that these CLICs mediate the selective activation of small GTPases in response to the lipid second messenger S1P. In cultured endothelial cells, CLIC1 and CLIC4 together mediated S1P-induced Rac activation and downstream endothelial cell adhesion and sprouting, whereas CLIC1 alone mediated S1P-induced Rho activation and downstream endothelial stress fiber formation. The findings establish mechanisms in which these CLICs regulate endothelial cell function through both coordinated and distinct manners. Chloride intracellular channels 1 (CLIC1) and 4 (CLIC4) are expressed in endothelial cells and regulate angiogenic behaviors in vitro, and the expression of Clic4 is important for vascular development and function in mice. Here, we found that CLIC1 and CLIC4 in endothelial cells regulate critical G protein–coupled receptor (GPCR) pathways associated with vascular development and disease. In cultured endothelial cells, we found that CLIC1 and CLIC4 transiently translocated to the plasma membrane in response to sphingosine 1-phosphate (S1P). Both CLIC1 and CLIC4 were essential for mediating S1P-induced activation of the small guanosine triphosphatase (GTPase) Rac1 downstream of S1P receptor 1 (S1PR1). In contrast, only CLIC1 was essential for S1P-induced activation of the small GTPase RhoA downstream of S1PR2 and S1PR3. Neither were required for other S1P-S1PR signaling outputs. Rescue experiments revealed that CLIC1 and CLIC4 were not functionally interchangeable, suggesting distinct and specific functions for CLICs in transducing GPCR signaling. These CLIC-mediated mechanisms were critical for S1P-induced stimulation of the barrier function in endothelial cell monolayers. Our results define CLICs as previously unknown players in the pathways linking GPCRs to small GTPases and vascular endothelial function.
Chronic pain (primary and secondary) in over 16s: summary of NICE guidance

Chronic pain—definedaspain that lasts formore than three months—is common, debilitating, and often difficult to treat.1 Chronic pain is classified in ICD-11 as being either primary or secondary. In chronic primary pain there is no clear underlying condition that adequately accounts for the pain or its impact; chronic secondary pain is pain linked to an underlying condition.2 Clinical judgment is required to determine whether the pain is primary, secondary, or a combination of the two (box 1).