Miracle-dz/UniFAR-FTUs huggingface dataset:
Effects of dietary lipid sources on growth performance and carcass traits in Pekin ducks

This study was conducted to determine the influence of dietary lipid sources on growth performance, carcass traits and taste scores in Pekin ducks. A total of 1,500 fifteen-day-old ducks (820 ± 22 g) were blocked based on body weight (BW), and randomly allotted to 3 treatments with 10 replicates of 50 birds each (25 males and 25 females). The experiment lasted for 4 wk, and dietary treatments included 3 different lipid sources (soybean oil, duck fat, and palm oil), which were evaluated in corn-soybean meal diets (3250 kcal/kg metabolizable energy and 16.5% crude protein for grower diet and 3350 kcal/kg metabolizable energy and 15.5% crude protein for finisher diet). During days 15 to 28, feeding soybean oil and palm oil diets increased (P < 0.05) body weight gain (BWG), but decreased (P < 0.05) feed intake, feed-to-gain ratio (F/G) and caloric conversion compared with duck fat. During days 29 to 42, birds fed duck fat diet had higher BWG, but lower (P < 0.05) F/G and caloric conversion than those fed soybean oil and palm oil diets. Overall, feeding soybean oil diet increased (P < 0.05) BWG and final BW, but decreased (P < 0.05) F/G compared with palm oil. Birds fed duck fat diet had higher (P < 0.05) skin, subcutaneous fat and abdominal fat yield compared with palm oil. Left breast meat yield in soybean oil group was higher (P < 0.05) than that in duck fat and palm oil groups. Birds in soybean oil group had lower (P < 0.05) roasting loss, but higher (P < 0.05) comprehensive score compared with duck fat and palm oil. In summary, birds fed soybean oil diet had the best growth performance and taste scores for roasting, whereas the duck fat was better in abdominal fat and subcutaneous fat yield than soybean oil and palm oil in Pekin ducks from 15 to 42 d of age under the same nutritional level.
ATP production optimization in biochemical mass action models with protein turnover

Abstract We introduce a simple approach to account for the ATP consumption and production in the case of mass action models of metabolic pathways including protein turnover. Under some simplifying assumptions, the method makes it possible to characterize the optimal rate of enzyme synthesis if the substrate concentrations and other rate constants are known. Furthermore we demonstrate that the proposed approach is capable of the comparison of the efficiency of different feedback laws in dynamic environment, considering time-varying substrate concentration.
Miscanthus × giganteus productivity: the effects of management in different environments

Miscanthus × giganteus is a C4 perennial grass that shows great potential as a high‐yielding biomass crop. Scant research has been published that reports M. × giganteus growth and biomass yields in different environments in the United States. This study investigated the establishment success, plant growth, and dry biomass yield of M. × giganteus during its first three seasons at four locations (Urbana, IL; Lexington, KY; Mead, NE; Adelphia, NJ) in the United States. Three nitrogen rates (0, 60, and 120 kg ha−1) were applied at each location each year. Good survival of M. × giganteus during its first winter was observed at KY, NE, and NJ (79–100%), and poor survival at IL (25%), due to late planting and cold winter temperatures. Site soil conditions, and growing‐season precipitation and temperature had the greatest impact on dry biomass yield between season 2 (2009) and season 3 (2010). Ideal 2010 weather conditions at NE resulted in significant yield increases (P < 0.0001) of 15.6–27.4 Mg ha−1 from 2009 to 2010. Small yield increases in KY of 17.1 Mg ha−1 in 2009 to 19.0 Mg ha−1 in 2010 could be attributed to excessive spring rain and hot dry conditions late in the growing season. Average M. ×giganteus biomass yields in NJ decreased from 16.9 to 9.7 Mg ha−1 between 2009 and 2010 and were related to hot dry weather, and poor soil conditions. Season 3 yields were positively correlated with end‐of‐season plant height ( ρ̂=0.91 ) and tiller density ( ρ̂=0.76 ). Nitrogen fertilization had no significant effect on plant height, tiller density, or dry biomass yield at any of the sites during 2009 or 2010.
Assessment of H-β zeolite as an ochratoxin binder for poultry

Most of the cereal-based ingredients used in poultry feed are contaminated with ochratoxin-A (OTA). We have investigated H-β zeolite (HBZ) as a new OTA binder for poultry, along with widely used clay mineral-based product (CM), using in vitro and in vivo methods. In vitro binding experiment was carried out using a biphasic assay, consisting of adsorption at pH 3.2 and desorption at pH 6.8. High adsorption (>98%) with less desorption (<5%) was observed for HBZ, whereas CM showed high binding (>98%) and moderate desorption (48%). In the in vitro experiments with the different simulated gastro-intestinal pH buffers, HBZ did not desorb OTA at any of the pH. Desorption of OTA was observed with CM, as the pH increases. From the in vitro kinetic and chemisorption studies, faster, stronger, and higher adsorption was observed for HBZ. Thermodynamic studies showed positive entropy (22.76 KJ/mol K) for HBZ, signifying predominant hydrophobic interactions towards OTA, whereas CM exhibited negative entropy (–3.67 KJ/mol K). The in vivo binding efficacy of HBZ and CM was tested in 5-wk-old broiler chickens. The study consisted of 4 experimental groups, each with 6 replicates having 2 birds per replicate. The groups were control, negative control (no toxin binder), T1 (HBZ at 1 kg/ton of feed), and T2(CM at 1 kg/ton of feed). Except control, all the replicates received 20 µg of OTA in the feed. Excreta samples of T1, T2, and NC contained 11.57, 7.16, and 2.78 µg of OTA respectively, which was significantly different from each other (P < 0.05). A growth performance trial was conducted in broiler chickens for 35 D. A total of 288 one-day-old birds were randomly segregated to 3 treatment groups, each with 8 replicates of 12 birds each. Treatment groups consisted of control, T1, and T2, treated with no toxin binder, HBZ, and CM at 1 kg/ton of feed, respectively. None of the treatment groups including control, affected BW gain, and feed conversion ratio (P > 0.05).
Physical activity level of kindergarten staff working with toddlers and older children in Norway

BACKGROUND: Research suggests that one-third of Norwegian adults satisfy national health recommendations for physical activity, but little knowledge exists regarding activity levels in different occupations. OBJECTIVES: This study investigates the level at which kindergarten staff fulfil these health recommendations, and examines differences in physical activity levels of staff working mainly with toddlers (1–3 years) and older children (4–6 years). The study also investigates physical activity level during working time and leisure time. METHODS: Physical activity levels among 43 kindergarten staff members were measured utilizing accelerometers and questionnaires. RESULTS: The results demonstrate that 86% of kindergarten staff satisfy the health recommendations for physical activity. Moreover, kindergarten staff working with older children were significantly more physically active than staff working with toddlers. CONCLUSIONS: Physical activity level during working time was found to be of major significance for fulfilling the health recommendations among kindergarten staff working with toddlers.
Antimicrobial peptide presenting potential strain-specific real time polymerase chain reaction assay for detecting the probiotic Lactobacillus reuteri KUB-AC5 in chicken intestine

The gene coding for antimicrobial peptides produced by probiotic Lactobacillus reuteri KUB-AC5 located on the cloned DNA fragment I-C46 containing 2 open reading frames I-C46-F2.1 and I-C46-F2.2 were designed for strain-specific primers P1 and P2, respectively, and assessed by real-time quantitative polymerase chain reaction. According to the obtained results, primer P1 has limited strain specificity. Primer P2 exhibited high efficacy and specificity at annealing temperature of 70°C while P1 annealed at 57°C causing nonspecific bands. Hence, P2 was selected for quantitative polymerase chain reaction assay by isothermal annealing and extension reaction at high temperature of 70°C resulting in linearity for its DNA sequences ranging from 102 to 107 target copy numbers per assay, and displaying a detection limit of 6.17 log cfu/g of cecal digesta. Using spike testing, this system was able to detect 7.88 ± 0.06 to 11.78 ± 0.06 log copy number/g of digesta, higher than cultivation assay at about 1 log cfu/g, with good correlation of 0.99. These results suggested possible detection of strain KUB-AC5 in the gastrointestinal tract of chicken to evaluate the efficacy and persistence of a probiotic strain which requires correct inclusion rates in the feed.
Review: an embryo's eye view of avian eggshell pigmentation

Current research into the evolution and adaptive function of avian eggshell pigmentation, including maculation, has focused mostly on signalling-based and structural function hypotheses but ignored the potential consequences of shell pigmentation for the developing avian embryo, especially in moderating the embryo's interaction with its light environment. The exposure of the eggs to sunlight that frequently accompanies avian incubation behaviour is one of the major evolutionary steps setting apart birds and reptiles, and coincides with the appearance of eggshell pigmentation. This suggests that shell pigments could play a major role in ensuring the successful development of the avian embryo. We propose that the effects of shell pigments on the egg contents should be considered in addition to established hypotheses of shell pigmentation such as crypsis, egg recognition or a possible structural function. This approach has the potential to identify trade-offs between different pigment functions and to resolve some of the long standing paradoxa in the evolution of eggshell colour, such as the occurrence of conspicuous blue eggs in passerines or the secondary evolution of white eggshells in cavity nesters. In particular, we identify seven hypotheses, which address how the interaction of eggshell pigments and the light environment may influence embryonic development. These hypotheses are the: thermo-regulation; UV-B protection; photo-acceleration; lateralization; circadian rhythm; photo-reactivation; and antimicrobial defence. We believe that the understanding of eggshell pigmentation will greatly benefit from taking these hypotheses into consideration when studying the functional significance of eggshell pigmentation and suggest a number of promising directions for future experimental and comparative research.
Influence of Rhodolith-Forming Species and Growth-Form on Associated Fauna of Rhodolith Beds in the Central-West Gulf of California, México

Rhodoliths provide a stable and three-dimensional habitat to which other seaweeds and invertebrates can attach. Although ecological factors affecting rhodolith beds have been studied, little is known about the effect of rhodolith species and growth-form on associated fauna. Experiments were conducted at three rhodolith beds in the central-west Gulf of California. Faunal abundance differed significantly in relation to rhodolith-forming species, but no significant differences were observed between different growth-forms. Rhodolith structure differs between the species Lithophyllum margaritae and Neogoniolithon trichotomum, and the combination of structure differences and rhodolith abundances may be responsible of the significant differences in faunal abundance and richness. Crustaceans, polychaetes and molluscs were the most important taxa in all three rhodolith beds. The amphipod species Pontogeneia nasa and the cnidarian Aiptasia sp. were dominant in both rhodolith beds, El Requeson and Isla Coyote, in Bahia Concepcion. The Isla Coronados rhodolith bed was dominated by an unidentified harpacticoid copepod (Copepoda sp.1). Rhodolith species is more important than growth-form in determining abundance and richness of the associated fauna. Nevertheless, factors such as wave motion, depth, bioturbation and others should be considered when studying organisms associated with rhodolith beds.
Epileptic Activity Intrinsically Generated in the Human Cerebellum

Neoplastic or dysplastic neuronal tissue in the brain stem and cerebellum can become epileptogenic in pediatric patients. However, it is unknown whether such tissue may transform intrinsic properties of the human cerebellum, making it capable of generating epileptic population activity. We noninvasively detected epileptiform signals unaveraged in a pediatric patient with epilepsy due to a tumor in the middle cerebellar peduncle. Analysis of generators of the signals revealed that the cerebellum ipsilateral and contralateral to the tumor was the dominant interictal spike generator and could initiate ictal activity, suggesting that human cerebellum may become capable of intrinsically generating epileptic activity. ANN NEUROL 2020;88:418–422.
Stability Control Method of Three-phase Energy Storage Converter Under Grid Short-circuit Fault

With a number of energy storage converters connected to the grid, transient instabilities about energy storage converters are more likely to appear when some problems happen in the grid. In order to work out the difficult problem about the instability of energy storage converters, this paper proposes an approach of modifying the phase-locked loop (PLL) to improve transient stabilities of energy storage converters, which can increase the quantity of intersections in the system after the grid fails. And then, the influence of the grid voltage drop degree on transient stabilities of energy storage converters are analyzed by drawing the phase diagram of phase difference, the analysis results show that when the parameters of the PLL and line impedance are set reasonably, the more serious the grid voltage drop is. , the more likely the energy storage converter is to be unstable. The method proposed in this paper can stabilize the system with no or only one intersection after a fault. , and the control method is simple. , and the effect is obvious. At last. , the simulation proves the accurateness of analysis in the paper.
The chemistry and physiological functions of sesame

Abstract Some historical facts on and botanical descriptions of sesame are given. Some flavor studies of raw and roasted sesame seeds and oils are described. Composition and some usages are also briefly reported. Sesame has long been regarded in the Orient as a health food which increases energy and prevents aging. Sesame oil has been known empirically as a cooking oil which is highly resistant to oxidative deterioration in comparison with other edible oils. Until recently there were no scientific studies to elucidate these interesting aspects of sesame seed and oil, but the author and members of his group initiated studies on the chemical elucidation of antioxidative principles of sesame seed and oil, and extensively investigated the antiaging effect of sesame. Presence of various new antioxidative lignan phenol compounds in sesame seed and oil is described. Sesaminol has been identified as a new antioxidative principle in raw sesame salad oil. The mechanism of the superior antioxidative activity of roas.
Occurrence of Bacillus cereus and Yersinia enterocolitica in South African retail meats

Abstract Ground beef, chicken broilers and processed meats (Vienna sausages, ham, salami) obtained from supermarkets in the Pretoria area (South Africa) were tested for the presence of Bacillus cereus and Yersinia enterocolitica. B. cereus counts were carried out on Bacillus cereus -selective agar and confirmed by the rapid confirmation procedure. Y. enerocolitica was isolated on Y. enterocolitica -selective agar. Total aerobic counts were performed on all the samples. Out of 51 samples, B. cereus was recovered from one broiler, three salami and five Vienna sausage samples, but not from gound beef or ham samples. The levels of detection ranged from log101·0 to log103·1 g−1sample. Y. enterocolitica occurred in eight ground beef, eight broiler, one Vienna sausage and two ham samples. Our results emphasize the potential hazard of the presence of B. cereus and Y. enterolitica in meat and poultry products in South Africa. This necessitates the implementation of methods to prevent the entry or proliferation of these pathogens in meat products.
Individual Nudix hydrolases affect diverse features of Pseudomonas aeruginosa

Abstract Nudix proteins catalyze the hydrolysis of pyrophosphate bonds in a variety of substrates and are ubiquitous in all domains of life. The genome of an important opportunistic human pathogen, Pseudomonas aeruginosa, encodes multiple Nudix proteins. To determine the role of nine Nudix hydrolases of the P. aeruginosa PAO1161 strain in its fitness, virulence or antibiotic resistance mutants devoid of individual enzymes were constructed and analyzed for growth rate, motility, biofilm formation, pyocyanin production, and susceptibility to oxidative stress and different antibiotics. The potential effect on bacterial virulence was studied using the Caenorhabditis elegans–P. aeruginosa infection model. Of the nine mutants tested, five had an altered phenotype in comparison with the wild‐type strain. The ΔPA3470, ΔPA3754, and ΔPA4400 mutants showed increased pyocyanin production, were more resistant to the β‐lactam antibiotic piperacillin, and were more sensitive to killing by H2O2. In addition, ΔPA4400 and ΔPA5176 had impaired swarming motility and were less virulent for C. elegans. The ΔPA4841 had an increased sensitivity to oxidative stress. These changes were reversed by providing the respective nudix gene in trans indicating that the observed phenotype alterations were indeed due to the lack of the particular Nudix protein.
Prokaryotic triterpenoids. (22R,32R)-34,35-Dinorbacteriohopane-32,33-diols from Acetobacter aceti ssp. xylinum: new bacteriohopane derivatives with shortened side-chain

Five new C33-pentacyclic triterpenoids, members of the hopanoid family, differ from all known biohopanoids in that their shortened side-chain bears only two vicinal hydroxy groups. They were isolated from Acetobacter aceti ssp, xylinum and were identified by spectroscopic methods. The absolute configuration at C-32 was shown to be (32R) by comparison of an appropriate derivative of the bacterial hopanoids with the diacetates of (22R,32R)-11(22R,32S)-34,35-dinorbacteriohopane-32,33-diol 12, respectively prepared by asymmetric hemisynthesis.
Patterns of Cortical Folding Associated with Autistic Symptoms in Carriers and Noncarriers of the 22q11.2 Microdeletion.

22q11.2 deletion syndrome (22q11.2DS) is a genetic condition accompanied by a range of psychiatric manifestations, including autism spectrum disorder (ASD). It remains unknown, however, whether these symptoms are mediated by the same or distinct neural mechanisms as in idiopathic ASD. Here, we examined differences in lGI associated with ASD in 50 individuals with 22q11.2DS (n = 25 with ASD, n = 25 without ASD) and 81 individuals without 22q11.2DS (n = 40 with ASD, n = 41 typically developing controls). We initially utilized a factorial design to identify the set of brain regions where lGI is associated with the main effect of 22q11.2DS, ASD, and with the 22q11.2DS-by-ASD interaction term. Subsequently, we employed canonical correlation analysis (CCA) to compare the multivariate association between variability in lGI and the complex clinical phenotype of ASD between 22q11.2DS carriers and noncarriers. Across approaches, we established that even though there is a high degree of clinical similarity across groups, the associated patterns of lGI significantly differed between carriers and noncarriers of the 22q11.2 microdeletion. Our results suggest that ASD symptomatology recruits different neuroanatomical underpinnings across disorders and that 22q11.2DS individuals with ASD represent a neuroanatomically distinct subgroup that differs from 22q11.2DS individuals without ASD and from individuals with idiopathic ASD.
Epigenome signatures landscaped by histone H3K9me3 are associated with the synaptic dysfunction in Alzheimer's disease

The pathogenesis of Alzheimer's disease (AD) and the commonest cause of dementia in the elderly remain incompletely understood. Recently, epigenetic modifications have been shown to play a potential role in neurodegeneration, but the specific involvement of epigenetic signatures landscaped by heterochromatin has not been studied in AD. Herein, we discovered that H3K9me3‐mediated heterochromatin condensation is elevated in the cortex of sporadic AD postmortem brains. In order to identify which epigenomes are modulated by heterochromatin, we performed H3K9me3‐chromatin immunoprecipitation (ChIP)‐sequencing and mRNA‐sequencing on postmortem brains from normal subjects and AD patients. The integrated analyses of genome‐wide ChIP‐ and mRNA‐sequencing data identified epigenomes that were highly occupied by H3K9me3 and inversely correlated with their mRNA expression levels in AD. Biological network analysis further revealed H3K9me3‐landscaped epigenomes to be mainly involved in synaptic transmission, neuronal differentiation, and cell motility. Together, our data show that the abnormal heterochromatin remodeling by H3K9me3 leads to down‐regulation of synaptic function‐related genes, suggesting that the epigenetic alteration by H3K9me3 is associated with the synaptic pathology of sporadic AD.
A phylogenetic analysis of the New World tribe Phanaeini (Coleoptera: Scarabaeidae: Scarabaeinae): Hypotheses on relationships and origins

A phylogenetic analysis of Phanaeini based on 137 morphological characters supports the hypothesis that the nine included genera, Coprophanaeus , Dendropaemon , Diabroctis , Homalotarsus, Megatharsis, Oxysternon , Phanaeus , Sulcophanaeus and Tetrameira , form a monophyletic clade. Monophyly is unaffected by the inclusion of Gromphas , Oruscatus , and Bolbites and these should also be considered phanaeines. The sister lineage is Ennearabdus (Eucraniini) and both evolved from ancestral Dichotomiini within South America. There is no support for a close relationship with the Onitini or any other remaining tribe. All phanaeine genera appear to be monophyletic except Sulcophanaeus , of which two species groups appear as sister taxa while the remaining three form an independent paraphyletic clade. Ancestral phanaeines were coprophagous with necrophagy evolving at least twice. Myrmecophily is also derived and most likely evolved only once in the common ancestor of Dendropaemon , Homalotarsus, Megatharsis and Tetramereia . Bare dung ball construction for larval development is also the most likely ancestral condition with a soil covering on the exterior ball surface and parental cooperation evolving in the more derived lineages.