Miracle-dz/UniFAR-FTUs huggingface dataset:
A first look into the influence of triathlon wetsuit on resting blood pressure and heart rate variability

The purpose of this study was to investigate the effects of wearing a wetsuit on resting cardiovascular measures (blood pressure (BP), heart rate variability (HRV)). The influence of position (upright, prone) and wetsuit size were also explored. Participants (n=12 males, 33.3±12.1 years) had BP and HRV measured during six resting conditions: standing or prone while not wearing a wetsuit (NWS), wearing the smallest (SWS), or largest (LWS) wetsuit (based upon manufacturer guidelines). Heart rate was recorded continuously over 5-mins; BP was measured three times per condition. HRV was represented by the ratio of low (LF) and high (HF) frequency (LF/HF ratio); mean arterial pressure (MAP) was calculated. Each dependent variable was analyzed using a 2 (position) x 3 (wetsuit) repeated measures ANOVA (α=0.05). Neither HRV parameter was influenced by position x wetsuit condition interaction (p>0.05) and MAP was not influenced by position (p=0.717). MAP and LF/HF ratio were both influenced by wetsuit condition (p<0.05) with higher during SWS than NWS (p=0.026) while LF/HF ratio was lower during SWS compared to NWS (p=0.032). LF/HF ratio was influenced by position being greater during standing vs. prone (p=0.001). It was concluded that during resting while on land (i.e., not submerged in water), wearing a small, tight-fitting wetsuit subtlety altered cardiovascular parameters for healthy, normotensive subjects.
Duodenal Duplication Cysts of Ampulla of Vater Containing Stone

Duodenal duplication cysts are rare congenital malformations. Most symptomatic cases are diagnosed in children and usually present with obstructive findings or bleeding symptoms. Treatment traditionally involves surgical resection, which can be often difficult because of the close proximity of the cysts to the papilla and bilopancreatic confluence. Endoscopic therapy has been used as an alternative to open surgery in a few selected cases. We report a case with a duodenal duplication cyst containing a brown pigmented stone within the cystic lumen. He was visited because of sudden right upper quadrant abdominal pain. An abdominal computed tomography revealed the presence of a cyst with a stone, which was finally removed by endoscopic resection.
Roles of NR2A and NR2B in the Development of Dendritic Arbor Morphology In Vivo

NMDA receptors (NMDARs) are important for neuronal development and circuit formation. The NMDAR subunits NR2A and NR2B are biophysically distinct and differentially expressed during development but their individual contribution to structural plasticity is unknown. Here we test whether NR2A and NR2B subunits have specific functions in the morphological development of tectal neurons in living Xenopus tadpoles. We use exogenous subunit expression and endogenous subunit knockdown to shift synaptic NMDAR composition toward NR2A or NR2B, as shown electrophysiologically. We analyzed the dendritic arbor structure and found evidence for both overlapping and distinct functions of NR2A and NR2B in dendritic development. Control neurons develop regions of high local branch density in their dendritic arbor, which may be important for processing topographically organized inputs. Exogenous expression of either NR2A or NR2B decreases local branch clusters, indicating a requirement for both subunits in dendritic arbor development. Knockdown of endogenous NR2A reduces local branch clusters, whereas knockdown of NR2B has no effect on branch clustering. Analysis of the underlying branch dynamics shows that exogenous NR2B-expressing neurons are more dynamic than control or exogenous NR2A-expressing neurons, demonstrating subunit-specific regulation of branch dynamics. Visual experience-dependent increases in dendritic arbor growth rate seen in control neurons are blocked in both exogenous NR2A- and NR2B-expressing neurons. These experiments indicate that NR2A and NR2B have subunit-specific properties in dendritic arbor development, but also overlapping functions, indicating a requirement for both subunits in neuronal development.
Human Papillomavirus Type 16 E7 Oncoprotein Associates with the Centrosomal Component γ-Tubulin

ABSTRACT Expression of a high-risk human papillomavirus (HPV) E7 oncoprotein is sufficient to induce aberrant centrosome duplication in primary human cells. The resulting centrosome-associated mitotic abnormalities have been linked to the development of aneuploidy. HPV type 16 (HPV16) E7 induces supernumerary centrosomes through a mechanism that is at least in part independent of the inactivation of the retinoblastoma tumor suppressor pRb and is dependent on cyclin-dependent kinase 2 activity. Here, we show that HPV16 E7 can concentrate around mitotic spindle poles and that a small pool of HPV16 E7 is associated with centrosome fractions isolated by sucrose density gradient centrifugation. The targeting of HPV16 E7 to the centrosome, however, was not sufficient for centrosome overduplication. Nonetheless, we found that HPV16 E7 can associate with the centrosomal regulator γ-tubulin and that the recruitment of γ-tubulin to the centrosome is altered in HPV16 E7-expressing cells. Since the association of HPV16 E7 with γ-tubulin is independent of pRb, p107, and p130, our results suggest that the association with γ-tubulin contributes to the pRb/p107/p130-independent ability of HPV16 E7 to subvert centrosome homeostasis.
Dual algorithms for the shortest path tree problem

We consider dual approaches for the Shortest Path Tree Problem. After a brief introduction to the problem, we review the most important dual algorithms which have been described in the literature for its solution, and propose a new family of dual ascent algorithms. In these algorithms, "local" and "global" dual updating operations are performed at the nodes in order to enlarge a partial shortest path tree, which at the beginning contains only the root node, until a shortest path tree is found. Several kinds of dual updating operations are proposed, which allow one to derive different dual algorithms from a general schema. One of them, in particular, which is based only on global operations, can be viewed as a dual interpretation of Dijkstra''s classical algorithm. Due to their structure, all the proposed approaches are suitable for parallel implementations. They are also suitable for reoptimization approaches, when the computation of shortest paths from different root nodes is required.
Optimality conditions for pessimistic trilevel optimization problem with middle-level problem being pessimistic

This paper mainly studies the optimality conditions for a class of pessimistic trilevel optimization problem, of which middle-level is a pessimistic problem. We firstly translate this problem into an auxiliary pessimistic bilevel optimization problem, by applying KKT approach for the lower level problem. Then we obtain a necessary optimality condition via the differential calculus of Mordukhovich. Finally, we obtain an existence theorem of optimal solution by direct method. c ©2016 All rights reserved.
Human Papillomavirus Infection and Vaccination: Awareness and Knowledge of HPV and Acceptability of HPV Vaccine among Mothers of Teenage Daughters in Weihai, Shandong, China

In preparation for the introduction of human papillomavirus (HPV) vaccine, we investigated awareness and knowledge of HPV/HPV vaccine and potential acceptability to HPV vaccine among mothers with a teenage daughter in Weihai, Shandong, China. A cross-sectional survey was conducted in 2013 with a sample of 1850 mothers who had a daughter (aged 9–17 years) attending primary, junior and senior high schools. In the final sample (N = 1578, response rate 85.30%), awareness of HPV was reported by 305 (19.32%) mothers. Awareness varied significantly by daughter’s age (P<0.01), mother’s education level (P<0.01), mother’s occupation (P<0.01), household income (P<0.01) and residence type (P<0.01). Knowledge about HPV/HPV vaccine was poor with a mean total score of 3.56 (SD = 2.40) out of a possible score of 13. Mothers with a higher education level reported higher levels of knowledge (P = 0.02). Slightly more than one-fourth (26.49%) of mothers expressed their potential acceptability of HPV vaccine for their daughters. Acceptability increased along with increased daughters’ age (P<0.01), household income (P<0.01) and knowledge level (P<0.01). House wives and unemployed mothers had the highest acceptability (P<0.01). The most common reasons for not accepting HPV vaccination were “My daughter is too young to have risk of cervical cancer (30.95%)”, “The vaccine has not been widely used, and the decision will be made after it is widely used (24.91%)”, “Worry about the safety of the vaccine (22.85%)”. Awareness and knowledge of HPV/HPV vaccines are poor and HPV vaccine acceptability is low among these Chinese mothers. These results may help inform appropriate health education programs in this population.
Smart-Sample : An Efficient Algorithm for Clustering Large High-Dimensional Datasets

Finding useful related patterns in a dataset is an important task in many interesting applications. In particular, one common need in many algorithms, is the ability to separate a given dataset into a small number of clusters. Each cluster represents a subset of data-points from the dataset, which are considered similar. In some cases, it is also necessary to distinguish data points that are not part of a pattern from the other data-points. This paper introduces a new data clustering method named smart-sample and compares its performance to several clustering methodologies. We show that smart-sample clusters successfully large high-dimensional datasets. In addition, smart-sample outperforms other methodologies in terms of running-time. A variation of the smart-sample algorithm, which guarantees efficiency in terms of I/O, is also presented. We describe how to achieve an approximation of the in-memory smart-sample algorithm using a constant number of scans with a single sort operation on the disk.
Reading fluency interventions that work in high-poverty schools

This study measured the impact of targeted reading interventions on improving reading fluency for second-grade students as indicated by their performance on a statewide standardized assessment of reading fluency proficiency. Reading fluency scores for students who received intervention in second grade were measured again in their third-grade year to see if the intervention had a lasting impact on their overall reading fluency ability. Statistical analysis using a paired samples t-test revealed that reading fluency ability increases with the use of targeted intervention among second grade students. A statistically significant relationship was discovered through the use of a paired samples t-test for students who receive targeted intervention in second grade and their third-grade IRI scores. This verifies that targeted reading fluency interventions are successful among students from high-poverty backgrounds. Individual and focus-group interviews were completed with teachers, para-professionals, and instructional coaches whom provided reading fluency interventions to students. Themes emerged indicating a need for targeted intervention, meaningful practice, and instructional strategies in order for students to become fluent readers. Further analysis determined that schools that utilize classroom teachers rather than para-professionals to provide reading fluency intervention to struggling, high-poverty students achieved the most overall growth on the IRI. Another contributing factor to overall growth on the IRI was the amount of time students received intervention. Students that received at least forty-five minutes a day of additional intervention exhibited higher levels of growth. Lastly, several different reading curricula were used in the present study, revealing that instructional strategies and targeted intervention leads to greater acquisition of reading fluency skills regardless of the prescribed curriculum.
Evaluation of Bounds for MIMO Channel Capacity for Synchronized Detection Approach

Here the focus is on the optimized design and performance of Rayleigh-faded Multi-Antenna multi-input/multi-output (MIMO) systems when both transmitter and receiver share imperfect (i.e., error impaired) channel estimates computed via training sequences. In particular, according to the emerging principle of the so called Synchronized Detection [18,23], for this operating scenario the proposal deals with a simple Water-Filling (WF)-like strategy for allocating power over transmit antennas and the test of its actual performance. Afterwards, the aim is the evaluation of some related figures of merit summarizing the overall system’s performance and their use for pointing out effective system’s design guidelines. In particular, some optimized solutions for power-vs.-bandwidth efficiency tradeoff are presented and their validity limits are debated. All the developed results explicitly take into account the actual reliability of the achievable channel estimates. Multiple-Antenna systems are able to exploit space diversity for increasing conveyed throughput without wasting bandwidth and power resources [1,4,10], so that, at the present, these systems are appealing candidate for emerging 4th generation WLANs [12,16]. In principle, information throughput of Multiple-Antenna systems may be further increased via an optimized allocation of the available power over transmitting antennas. As it is well known, when the MIMO channel is perfectly
Competitive Learning Neural Network Ensemble Weighted by Predicted Performance.

Ensemble approaches have been shown to enhance classification by combining the outputs from a set of voting classifiers. Diversity in error patterns among base classifiers promotes ensemble performance. Multi-task learning is an important characteristic for Neural Network classifiers. Introducing a secondary output unit that receives different training signals for base networks in an ensemble can effectively promote diversity and improve ensemble performance. Here a Competitive Learning Neural Network Ensemble is proposed where a secondary output unit predicts the classification performance of the primary output unit in each base network. The networks compete with each other on the basis of classification performance and partition the stimulus space. The secondary units adaptively receive different training signals depending on the competition. As the result, each base network develops i°preferencei± over different regions of the stimulus space as indicated by their secondary unit outputs. To form an ensemble decision, all base networksi¯ primary unit outputs are combined and weighted according to the secondary unit outputs. The effectiveness of the proposed approach is demonstrated with the experiments on one real-world and four artificial classification problems.
Residual force enhancement after stretch of contracting frog single muscle fibers

Single fibers from the tibialis anterior muscle of Rana temporaria at 0.8-3.8 degrees C were subjected to long tetani lasting up to 8 s. Stretch of the fiber early in the tetanus caused an enhancement of force above the isometric control level which decayed only slowly and stayed higher throughout the contraction. This residual enhancement was uninfluenced by velocity of stretch and occurred only on the descending limb of the length-tension curve. The absolute magnitude of the effect increased with sarcomere length to a maximum at approximately 2.9 micrometers and then declined. The phenomenon was further characterized by its dependence on the amplitude of stretch. The final force level reached after stretch was usually higher than the isometric force level corresponding to the starting length of the stretch. The possibility that the phenomenon was caused by nonuniformity of sarcomere length along the fiber was examined by (a) laser diffraction studies that showed sarcomere stretch at all locations and (b) studies of 9-10 segments of approximately 0.6-0.7 mm along the entire fiber, which all elongated during stretch. Length-clamped segments showed residual force enhancement after stretch when compared with the tetanus produced by the same segment held at the short length as well as at the long length. It is concluded that residual force enhancement after stretch is a property shown by all individual segments along the fiber.
Probing the ATP Site of GRP78 with Nucleotide Triphosphate Analogs

GRP78, a member of the ER stress protein family, can relocate to the surface of cancer cells, playing key roles in promoting cell proliferation and metastasis. GRP78 consists of two major functional domains: the ATPase and protein/peptide-binding domains. The protein/peptide-binding domain of cell-surface GRP78 has served as a novel functional receptor for delivering cytotoxic agents (e.g., a apoptosis-inducing peptide or taxol) across the cell membrane. Here, we report our study on the ATPase domain of GRP78 (GRP78ATPase), whose potential as a transmembrane delivery system of cytotoxic agents (e.g., ATP-based nucleotide triphosphate analogs) remains unexploited. As the binding of ligands (ATP analogs) to a receptor (GRP78ATPase) is a pre-requisite for internalization, we determined the binding affinities and modes of GRP78ATPase for ADP, ATP and several ATP analogs using surface plasmon resonance and x-ray crystallography. The tested ATP analogs contain one of the following modifications: the nitrogen at the adenine ring 7-position to a carbon atom (7-deazaATP), the oxygen at the β-γ bridge position to a carbon atom (AMPPCP), or the removal of the 2’-OH group (2’-deoxyATP). We found that 7-deazaATP displays an affinity and a binding mode that resemble those of ATP regardless of magnesium ion (Mg++) concentration, suggesting that GRP78 is tolerant to modifications at the 7-position. By comparison, AMPPCP’s binding affinity was lower than ATP and Mg++-dependent, as the removal of Mg++ nearly abolished binding to GRP78ATPase. The AMPPCP-Mg++ structure showed evidence for the critical role of Mg++ in AMPPCP binding affinity, suggesting that while GRP78 is sensitive to modifications at the β-γ bridge position, these can be tolerated in the presence of Mg++. Furthermore, 2’-deoxyATP’s binding affinity was significantly lower than those for all other nucleotides tested, even in the presence of Mg++. The 2’-deoxyATP structure showed the conformation of the bound nucleotide flipped out of the active site, explaining the low affinity binding to GRP78 and suggesting that the 2’-OH group is essential for the high affinity binding to GRP78. Together, our results demonstrate that GRP78ATPase possesses nucleotide specificity more relaxed than previously anticipated and can tolerate certain modifications to the nucleobase 7-position and, to a lesser extent, the β-γ bridging atom, thereby providing a possible atomic mechanism underlying the transmembrane transport of the ATP analogs.
Clinicopathological features and prognosis of coexistence of gastric gastrointestinal stromal tumor and gastric cancer

AbstractThe coexistence of gastric gastrointestinal stromal tumor (GIST) and gastric cancer is relatively high, and its prognosis is controversial due to the complex and variant kinds of presentation. Thus, the present study aimed to explore the clinicopathological features and prognostic factors of gastric GIST with synchronous gastric cancer.From May 2010 to November 2015, a total of 241 gastric GIST patients were retrospectively enrolled in the present study. The patients with coexistence of gastric GIST and gastric cancer were recorded. The clinicopathological features and prognoses of patients were analyzed.Among 241 patients, 24 patients had synchronous gastric cancer (synchronous group) and 217 patients did not (no-synchronous group). The synchronous group presented a higher percentage of elders (66.7% vs 39.6%, P = 0.001) and males (87.5% vs 48.4%, P < 0.001) than the no-synchronous group. The tumor diameter, mitotic index, and National Institutes of Health degree were also significantly different between the 2 groups (all P < 0.05). The 5-year disease-free survival and disease-specific survival rates of synchronous group were significantly lower than those of no-synchronous group (54.9% vs 93.5%, P < 0.001; 37.9% vs 89.9%, P < 0.001, respectively). However, the 5-year overall survival rates between synchronous and gastric cancer groups were comparable (37.9% vs 57.6%, P = 0.474). The coexistence of gastric GIST and gastric cancer was common in elder male patients. The synchronous GIST was common in low-risk category. The prognosis of gastric GIST with synchronous gastric cancer was worse than that of primary-single gastric GIST, but was comparable with primary-single gastric cancer.
MRI Tractography of Corticospinal Tract and Arcuate Fasciculus in High-Grade Gliomas Performed by Constrained Spherical Deconvolution: Qualitative and Quantitative Analysis

BACKGROUND AND PURPOSE: MR imaging tractography is increasingly used to perform noninvasive presurgical planning for brain gliomas. Recently, constrained spherical deconvolution tractography was shown to overcome several limitations of commonly used DTI tractography. The purpose of our study was to evaluate WM tract alterations of both the corticospinal tract and arcuate fasciculus in patients with high-grade gliomas, through qualitative and quantitative analysis of probabilistic constrained spherical deconvolution tractography, to perform reliable presurgical planning. MATERIALS AND METHODS: Twenty patients with frontoparietal high-grade gliomas were recruited and evaluated by using a 3T MR imaging scanner with both morphologic and diffusion sequences (60 diffusion directions). We performed probabilistic constrained spherical deconvolution tractography and tract quantification following diffusion tensor parameters: fractional anisotropy; mean diffusivity; linear, planar, and spherical coefficients. RESULTS: In all patients, we obtained tractographic reconstructions of the medial and lateral portions of the corticospinal tract and arcuate fasciculus, both on the glioma-affected and nonaffected sides of the brain. The affected lateral corticospinal tract and the arcuate fasciculus showed decreased fractional anisotropy (z = 2.51, n = 20, P = .006; z = 2.52, n = 20, P = .006) and linear coefficient (z = 2.51, n = 20, P = .006; z = 2.52, n = 20, P = .006) along with increased spherical coefficient (z = −2.51, n = 20, P = .006; z = −2.52, n = 20, P = .006). Mean diffusivity values were increased only in the lateral corticospinal tract (z = −2.53, n = 20, P = .006). CONCLUSIONS: In this study, we demonstrated that probabilistic constrained spherical deconvolution can provide essential qualitative and quantitative information in presurgical planning, which was not otherwise achievable with DTI. These findings can have important implications for the surgical approach and postoperative outcome in patients with glioma.