Miracle-dz/UniFAR-FTUs huggingface dataset:
Coronary artery segmentation in non-contrast calcium scoring CT images using deep learning

Precise localization of coronary arteries in Computed Tomography (CT) scans is critical from the perspective of medical assessment of coronary artery disease. Although various methods exist that offer high-quality segmentation of coronary arteries in cardiac contrast-enhanced CT scans, the potential of less invasive, non-contrast CT in this area is still not fully exploited. Since such fine anatomical structures are hardly visible in this type of medical images, the existing methods are characterized by high recall and low precision, and are used mainly for filtering of atherosclerotic plaques in the context of calcium scoring. In this paper, we address this research gap and introduce a deep learning algorithm for segmenting coronary arteries in multi-vendor ECG-gated non-contrast cardiac CT images which benefits from a novel framework for semi-automatic generation of Ground Truth (GT) via image registration. We hypothesize that the proposed GT generation process is much more efficient in this case than manual segmentation, since it allows for a fast generation of large volumes of diverse data, which leads to well-generalizing models. To investigate and thoroughly evaluate the segmentation quality based on such an approach, we propose a novel method for manual mesh-to-image registration, which is used to create our test-GT. The experimental study shows that the trained model has significantly higher accuracy than the GT used for training, and leads to the Dice and clDice metrics close to the interrater variability.
Noise misleads rotation invariant algorithms on sparse targets

It is well known that the class of rotation invariant algorithms are suboptimal even for learning sparse linear problems when the number of examples is below the"dimension"of the problem. This class includes any gradient descent trained neural net with a fully-connected input layer (initialized with a rotationally symmetric distribution). The simplest sparse problem is learning a single feature out of $d$ features. In that case the classification error or regression loss grows with $1-k/n$ where $k$ is the number of examples seen. These lower bounds become vacuous when the number of examples $k$ reaches the dimension $d$. We show that when noise is added to this sparse linear problem, rotation invariant algorithms are still suboptimal after seeing $d$ or more examples. We prove this via a lower bound for the Bayes optimal algorithm on a rotationally symmetrized problem. We then prove much lower upper bounds on the same problem for simple non-rotation invariant algorithms. Finally we analyze the gradient flow trajectories of many standard optimization algorithms in some simple cases and show how they veer toward or away from the sparse targets. We believe that our trajectory categorization will be useful in designing algorithms that can exploit sparse targets and our method for proving lower bounds will be crucial for analyzing other families of algorithms that admit different classes of invariances.
CCC: Color Classified Colorization

Automatic colorization of gray images with objects of different colors and sizes is challenging due to inter- and intra-object color variation and the small area of the main objects due to extensive backgrounds. The learning process often favors dominant features, resulting in a biased model. In this paper, we formulate the colorization problem into a multinomial classification problem and then apply a weighted function to classes. We propose a set of formulas to transform color values into color classes and vice versa. Class optimization and balancing feature distribution are the keys for good performance. Observing class appearance on various extremely large-scale real-time images in practice, we propose 215 color classes for our colorization task. During training, we propose a class-weighted function based on true class appearance in each batch to ensure proper color saturation of individual objects. We establish a trade-off between major and minor classes to provide orthodox class prediction by eliminating major classes' dominance over minor classes. As we apply regularization to enhance the stability of the minor class, occasional minor noise may appear at the object's edges. We propose a novel object-selective color harmonization method empowered by the SAM to refine and enhance these edges. We propose a new color image evaluation metric, the Chromatic Number Ratio (CNR), to quantify the richness of color components. We compare our proposed model with state-of-the-art models using five different datasets: ADE, Celeba, COCO, Oxford 102 Flower, and ImageNet, in both qualitative and quantitative approaches. The experimental results show that our proposed model outstrips other models in visualization and CNR measurement criteria while maintaining satisfactory performance in regression (MSE, PSNR), similarity (SSIM, LPIPS, UIQI), and generative criteria (FID).
TripoSR: Fast 3D Object Reconstruction from a Single Image

This technical report introduces TripoSR, a 3D reconstruction model leveraging transformer architecture for fast feed-forward 3D generation, producing 3D mesh from a single image in under 0.5 seconds. Building upon the LRM network architecture, TripoSR integrates substantial improvements in data processing, model design, and training techniques. Evaluations on public datasets show that TripoSR exhibits superior performance, both quantitatively and qualitatively, compared to other open-source alternatives. Released under the MIT license, TripoSR is intended to empower researchers, developers, and creatives with the latest advancements in 3D generative AI.
Interpretable Models for Detecting and Monitoring Elevated Intracranial Pressure

Detecting elevated intracranial pressure (ICP) is crucial in diagnosing and managing various neurological conditions. These fluctuations in pressure are transmitted to the optic nerve sheath (ONS), resulting in changes to its diameter, which can then be detected using ultrasound imaging devices. However, interpreting sonographic images of the ONS can be challenging. In this work, we propose two systems that actively monitor the ONS diameter throughout an ultrasound video and make a final prediction as to whether ICP is elevated. To construct our systems, we leverage subject matter expert (SME) guidance, structuring our processing pipeline according to their collection procedure, while also prioritizing interpretability and computational efficiency. We conduct a number of experiments, demonstrating that our proposed systems are able to outperform various baselines. One of our SMEs then manually validates our top system's performance, lending further credibility to our approach while demonstrating its potential utility in a clinical setting.
Geometric Dynamics of Signal Propagation Predict Trainability of Transformers

We investigate forward signal propagation and gradient back propagation in deep, randomly initialized transformers, yielding simple necessary and sufficient conditions on initialization hyperparameters that ensure trainability of deep transformers. Our approach treats the evolution of the representations of $n$ tokens as they propagate through the transformer layers in terms of a discrete time dynamical system of $n$ interacting particles. We derive simple update equations for the evolving geometry of this particle system, starting from a permutation symmetric simplex. Our update equations show that without MLP layers, this system will collapse to a line, consistent with prior work on rank collapse in transformers. However, unlike prior work, our evolution equations can quantitatively track particle geometry in the additional presence of nonlinear MLP layers, and it reveals an order-chaos phase transition as a function of initialization hyperparameters, like the strength of attentional and MLP residual connections and weight variances. In the ordered phase the particles are attractive and collapse to a line, while in the chaotic phase the particles are repulsive and converge to a regular $n$-simplex. We analytically derive two Lyapunov exponents: an angle exponent that governs departures from the edge of chaos in this particle system, and a gradient exponent that governs the rate of exponential growth or decay of backpropagated gradients. We show through experiments that, remarkably, the final test loss at the end of training is well predicted just by these two exponents at the beginning of training, and that the simultaneous vanishing of these two exponents yields a simple necessary and sufficient condition to achieve minimal test loss.
Enhancing Generalization in Medical Visual Question Answering Tasks Via Gradient-Guided Model Perturbation

Leveraging pre-trained visual language models has become a widely adopted approach for improving performance in downstream visual question answering (VQA) applications. However, in the specialized field of medical VQA, the scarcity of available data poses a significant barrier to achieving reliable model generalization. Numerous methods have been proposed to enhance model generalization, addressing the issue from data-centric and model-centric perspectives. Data augmentation techniques are commonly employed to enrich the dataset, while various regularization approaches aim to prevent model overfitting, especially when training on limited data samples. In this paper, we introduce a method that incorporates gradient-guided parameter perturbations to the visual encoder of the multimodality model during both pre-training and fine-tuning phases, to improve model generalization for downstream medical VQA tasks. The small perturbation is adaptively generated by aligning with the direction of the moving average gradient in the optimization landscape, which is opposite to the directions of the optimizer's historical updates. It is subsequently injected into the model's visual encoder. The results show that, even with a significantly smaller pre-training image caption dataset, our approach achieves competitive outcomes on both VQA-RAD and SLAKE datasets.
DUFOMap: Efficient Dynamic Awareness Mapping

The dynamic nature of the real world is one of the main challenges in robotics. The first step in dealing with it is to detect which parts of the world are dynamic. A typical benchmark task is to create a map that contains only the static part of the world to support, for example, localization and planning. Current solutions are often applied in post-processing, where parameter tuning allows the user to adjust the setting for a specific dataset. In this paper, we propose DUFOMap, a novel dynamic awareness mapping framework designed for efficient online processing. Despite having the same parameter settings for all scenarios, it performs better or is on par with state-of-the-art methods. Ray casting is utilized to identify and classify fully observed empty regions. Since these regions have been observed empty, it follows that anything inside them at another time must be dynamic. Evaluation is carried out in various scenarios, including outdoor environments in KITTI and Argoverse 2, open areas on the KTH campus, and with different sensor types. DUFOMap outperforms the state of the art in terms of accuracy and computational efficiency. The source code, benchmarks, and links to the datasets utilized are provided. See https://kin-zhang.github. io/dufomap for more details.
Unlocking Electro-optic Resonant Phase Shifting for Multi-dimensional, Ultra-dynamic Photonic Switches

Optical circuit switching is connection-oriented, being deterministic through the reservation of a complete wavelength channel or spatial path for a certain period. However, this comes at a trade-off against link dynamics, and overall capacity can thus be constrained by the time slot reservations, especially for switches with microsecond- to millisecond-scale reconfiguration times. For data-intensive applications, the communication patterns associated with random data sets typically yield short-lived flows. This situation calls for a new multi-dimensional switching paradigm that fully exploits not only the space and wavelength domains but also with nanosecond-scale reconfigurable capability in the time domain to enable ultra-dynamic links. In this work, we focus on the exploitation of micro-ring resonant phase shifters (RPSs) that are wavelength selective for optical switching in a single plane. By proposing an innovative analytical method with transmission circle chart, we fully unlock the power of RPS with nanosecond-scale reconfigurability and the capability to arbitrarily manipulate its phase and amplitude. Such a compact model offers fresh insights into designs with under and critically coupled RPSs beyond the commonly explored over-coupling condition. This creates not only versatile switch elements but also perfect absorbers for robust multi-wavelength operations. The proposed device can bring about a breakthrough in the optical switching capacity that potentially addresses the challenges faced by modern data center networks, as well as other photonic circuits for high-throughput signal processing.
Situated Understanding of Older Adults' Interactions with Voice Assistants: A Month-long In-home Study

Our work addresses the challenges older adults face with commercial Voice Assistants (VAs), notably in conversation breakdowns and error handling. Traditional methods of collecting user experiences-usage logs and post-hoc interviews-do not fully capture the intricacies of older adults' interactions with VAs, particularly regarding their reactions to errors. To bridge this gap, we equipped 15 older adults' homes with Amazon smart speakers integrated with custom audio recorders to collect ``in-the-wild'' audio interaction data for detailed error analysis. Recognizing the conversational limitations of current VAs, our study also explored the capabilities of Large Language Models (LLMs) to handle natural and imperfect text for improving VAs. Midway through our study, we deployed ChatGPT-powered Alexa skill to investigate its efficacy for older adults. Our research suggests leveraging vocal and verbal responses combined with LLMs' contextual capabilities for enhanced error prevention and management in VAs, while proposing design considerations to align VA capabilities with older adults' expectations.
An Efficient Model-Based Approach on Learning Agile Motor Skills without Reinforcement

Learning-based methods have improved locomotion skills of quadruped robots through deep reinforcement learning. However, the sim-to-real gap and low sample efficiency still limit the skill transfer. To address this issue, we propose an efficient model-based learning framework that combines a world model with a policy network. We train a differentiable world model to predict future states and use it to directly supervise a Variational Autoencoder (VAE)-based policy network to imitate real animal behaviors. This significantly reduces the need for real interaction data and allows for rapid policy updates. We also develop a high-level network to track diverse commands and trajectories. Our simulated results show a tenfold sample efficiency increase compared to reinforcement learning methods such as PPO. In real-world testing, our policy achieves proficient command-following performance with only a two-minute data collection period and generalizes well to new speeds and paths.
Human-AI Collaboration Increases Skill Tagging Speed but Degrades Accuracy

AI approaches are progressing besting humans at game-related tasks (e.g. chess). The next stage is expected to be Human-AI collaboration; however, the research on this subject has been mixed and is in need of additional data points. We add to this nascent literature by studying Human-AI collaboration on a common administrative educational task. Education is a special domain in its relation to AI and has been slow to adopt AI approaches in practice, concerned with the educational enterprise losing its humanistic touch and because standard of quality is demanded because of the impact on a person's career and developmental trajectory. In this study (N = 22), we design an experiment to explore the effect of Human-AI collaboration on the task of tagging educational content with skills from the US common core taxonomy. Our results show that the experiment group (with AI recommendations) saved around 50% time (p<0.01) in the execution of their tagging task but at the sacrifice of 7.7% recall (p = 0.267) and 35% accuracy (p= 0.1170) compared with the non-AI involved control group, placing the AI+human group in between the AI alone (lowest performance) and the human alone (highest performance). We further analyze log data from this AI collaboration experiment to explore under what circumstances humans still exercised their discernment when receiving recommendations. Finally, we outline how this study can assist in implementing AI tools, like ChatGPT, in education.
Can LLMs Generate Architectural Design Decisions? -An Exploratory Empirical study

Architectural Knowledge Management (AKM) involves the organized handling of information related to architectural decisions and design within a project or organization. An essential artifact of AKM is the Architecture Decision Records (ADR), which documents key design decisions. ADRs are documents that capture decision context, decision made and various aspects related to a design decision, thereby promoting transparency, collaboration, and understanding. Despite their benefits, ADR adoption in software development has been slow due to challenges like time constraints and inconsistent uptake. Recent advancements in Large Language Models (LLMs) may help bridge this adoption gap by facilitating ADR generation. However, the effectiveness of LLM for ADR generation or understanding is something that has not been explored. To this end, in this work, we perform an exploratory study that aims to investigate the feasibility of using LLM for the generation of ADRs given the decision context. In our exploratory study, we utilize GPT and T5-based models with 0-shot, few-shot, and fine-tuning approaches to generate the Decision of an ADR given its Context. Our results indicate that in a 0-shot setting, state-of-the-art models such as GPT-4 generate relevant and accurate Design Decisions, although they fall short of human-level performance. Additionally, we observe that more cost-effective models like GPT-3.5 can achieve similar outcomes in a few-shot setting, and smaller models such as Flan-T5 can yield comparable results after fine-tuning. To conclude, this exploratory study suggests that LLM can generate Design Decisions, but further research is required to attain human-level generation and establish standardized widespread adoption.
Quantum for Good and the Societal Impact of Quantum Computing

Quantum computing promises to help humanity solve problems that would otherwise be intractable on classical computers. Unlike today's machines, quantum computers use a novel computing process that leverages the foundational quantum mechanical laws of nature. This unlocks unparalleled compute power for certain applications and promises to help solve some of our generation's gravest challenges, including the climate crisis, food insecurity, and widespread disease. No one entity will be able to realize this end state alone. Developing a fault-tolerant quantum supercomputer and a vibrant ecosystem around it will require deep partnerships between industry, governments, and academia. It will also require collective action to enable and promote positive applications of quantum computing and ensure that the safe and responsible use of the technology is at the center of its development and deployment. Achieving these objectives will require focusing on three priorities: 1. Impact. Ensure quantum computing benefits all of humankind by developing quantum solutions to solve critical, global problems. 2. Use. Protect against malicious use by accelerating the deployment of quantum-safe cryptography and developing governance processes and controls for the responsible use of quantum machines. 3. Access. Democratize the potential for economic growth across all of society through skilling, workforce and ecosystem development, and digital infrastructure. This paper discusses each in turn.
$L_0$ Regularization of Field-Aware Factorization Machine through Ising Model

We examined the use of the Ising model as an $L_0$ regularization method for field-aware factorization machines (FFM). This approach improves generalization performance and has the advantage of simultaneously determining the best feature combinations for each of several groups. We can deepen the interpretation and understanding of the model from the similarities and differences in the features selected in each group.
Spatially parallel decoding for multi-qubit lattice surgery

Running quantum algorithms protected by quantum error correction requires a real time, classical decoder. To prevent the accumulation of a backlog, this decoder must process syndromes from the quantum device at a faster rate than they are generated. Most prior work on real time decoding has focused on an isolated logical qubit encoded in the surface code. However, for surface code, quantum programs of utility will require multi-qubit interactions performed via lattice surgery. A large merged patch can arise during lattice surgery -- possibly as large as the entire device. This puts a significant strain on a real time decoder, which must decode errors on this merged patch and maintain the level of fault-tolerance that it achieves on isolated logical qubits. These requirements are relaxed by using spatially parallel decoding, which can be accomplished by dividing the physical qubits on the device into multiple overlapping groups and assigning a decoder module to each. We refer to this approach as spatially parallel windows. While previous work has explored similar ideas, none have addressed system-specific considerations pertinent to the task or the constraints from using hardware accelerators. In this work, we demonstrate how to configure spatially parallel windows, so that the scheme (1) is compatible with hardware accelerators, (2) supports general lattice surgery operations, (3) maintains the fidelity of the logical qubits, and (4) meets the throughput requirement for real time decoding. Furthermore, our results reveal the importance of optimally choosing the buffer width to achieve a balance between accuracy and throughput -- a decision that should be influenced by the device's physical noise.
Bandit Profit-maximization for Targeted Marketing

We study a sequential profit-maximization problem, optimizing for both price and ancillary variables like marketing expenditures. Specifically, we aim to maximize profit over an arbitrary sequence of multiple demand curves, each dependent on a distinct ancillary variable, but sharing the same price. A prototypical example is targeted marketing, where a firm (seller) wishes to sell a product over multiple markets. The firm may invest different marketing expenditures for different markets to optimize customer acquisition, but must maintain the same price across all markets. Moreover, markets may have heterogeneous demand curves, each responding to prices and marketing expenditures differently. The firm's objective is to maximize its gross profit, the total revenue minus marketing costs. Our results are near-optimal algorithms for this class of problems in an adversarial bandit setting, where demand curves are arbitrary non-adaptive sequences, and the firm observes only noisy evaluations of chosen points on the demand curves. We prove a regret upper bound of $\widetilde{\mathcal{O}}\big(nT^{3/4}\big)$ and a lower bound of $\Omega\big((nT)^{3/4}\big)$ for monotonic demand curves, and a regret bound of $\widetilde{\Theta}\big(nT^{2/3}\big)$ for demands curves that are monotonic in price and concave in the ancillary variables.