Miracle-dz/UniFAR-FTUs huggingface dataset:
Nestor , Paul G . , Toshiaki Onitsuka , Ronald

We sought to identify the functional correlates of reduced magnetic resonance imaging (MRI) volumes of the superior temporal gyrus (STG) and the fusiform gyrus (FG) in patients with chronic schizophrenia. MRI volumes, positive/negative symptoms, and neuropsychological tests of facial memory and executive functioning were examined within the same subjects. The results indicated two distinct, dissociable brain structure-function relationships: (1) reduced left STG volume-positive symptoms-executive deficits; (2) reduced left FG-negative symptoms-facial memory deficits. STG and FG volume reductions may each make distinct contributions to symptoms and cognitive deficits of schizophrenia.
Clofazimine for the treatment of multidrug-resistant tuberculosis: prospective, multicenter, randomized controlled study in China.

BACKGROUND Clofazimine (Cfz) has shown activity against Mycobacterium tuberculosis, including multidrug-resistant (MDR) strains in vitro and in animal studies. Here we evaluate the clinical efficacy and tolerability of using Cfz to treat MDR tuberculosis in China. METHODS We enrolled 105 patients who had sputum culture-positive MDR tuberculosis in 6 major tuberculosis specialty hospitals in China. Patients were randomly assigned to either the Cfz therapy group (n = 53) or control group (n = 52). Patients in the 2 groups were given 21 months of individual-based chemotherapy regimens based on medication history and drug susceptibility test results. The Cfz therapy group regimens incorporated 100 mg of Cfz once daily for 21 months. RESULTS Three patients in each group discontinued therapy because of side effects or other reasons. Sputum culture conversion to negative was earlier in patients who received Cfz compared with controls (P = .042 by log-rank test). Chest computed tomography showed cavitary changes in 46 patients in the Cfz therapy group and 45 in the control group. Cavity closure was earlier in patient who received Cfz compared with controls (P = .047 by log-rank test). The treatment success rate in the Cfz group was 73.6%, higher than that in control group (53.8%; P = .035). Side effects in skin only occurred in the Cfz group. The rates of skin discoloration and ichthyosis were 94.3% and 47.2%, respectively. CONCLUSIONS Using Cfz to treat MDR tuberculosis promotes cavity closure, accelerates sputum culture conversion, and improves treatment success rates.
Prostate Cancer-Specific and Potent Antitumor Effect of a DD3-Controlled Oncolytic Virus Harboring the PTEN Gene

Prostate cancer is a major health problem for men in Western societies. Here we report a Prostate Cancer-Specific Targeting Gene-Viro-Therapy (CTGVT-PCa), in which PTEN was inserted into a DD3-controlled oncolytic viral vector (OV) to form Ad.DD3. E1A.E1B(Δ55)-(PTEN) or, briefly, Ad.DD3. D55-PTEN. The woodchuck post-transcriptional element (WPRE) was also introduced at the downstream of the E1A coding sequence, resulting in much higher expression of the E1A gene. DD3 is one of the most prostate cancer-specific genes and has been used as a clinical bio-diagnostic marker. PTEN is frequently inactivated in primary prostate cancers, which is crucial for prostate cancer progression. Therefore, the Ad.DD3. D55-PTEN has prostate cancer specific and potent antitumor effect. The tumor growth rate was almost completely inhibited with the final tumor volume after Ad.DD3. D55-PTEN treatment less than the initial volume at the beginning of Ad.DD3. D55-PTEN treatment, which shows the powerful antitumor effect of Ad.DD3. D55-PTEN on prostate cancer tumor growth. The CTGVT-PCa construct reported here killed all of the prostate cancer cell lines tested, such as DU145, 22RV1 and CL1, but had a reduced or no killing effect on all the non-prostate cancer cell lines tested. The mechanism of action of Ad.DD3. D55-PTEN was due to the induction of apoptosis, as detected by TUNEL assays and flow cytometry. The apoptosis was mediated by mitochondria-dependent and -independent pathways, as determined by caspase assays and mitochondrial membrane potential.
Potential Leaders Trade Off Goal-Oriented and Socially Oriented Behavior in Mobile Animal Groups

Leadership is widespread across the animal kingdom. In self-organizing groups, such as fish schools, theoretical models predict that effective leaders need to balance goal-oriented motion, such as toward a known resource, with their tendency to be social. Increasing goal orientation is predicted to increase decision speed and accuracy, but it is also predicted to increase the risk of the group splitting. To test these key predictions, we trained fish (golden shiners, Notemigonus crysoleucas) to associate a spatial target with a food reward (“informed” individuals) before testing each singly with a group of eight untrained fish who were uninformed (“naive”) about the target. Informed fish that exhibited faster and straighter paths (indicative of greater goal orientation) were more likely to reach their preferred target and did so more quickly. However, such behavior was associated with a tendency to leave untrained fish behind and, therefore, with failure to transmit their preference to others. Either all or none of the untrained fish stayed with the trained fish in the majority of trials. Using a simple model of self-organized coordination and leadership in groups, we recreate these features of leadership observed experimentally, including the apparent consensus behavior among naive individuals. Effective leadership thus requires informed individuals to appropriately balance goal-oriented and socially oriented behavior.
cosystem structure and functioning of Lake Taihu ( China ) and he impacts of fishing

Lake Taihu is the third largest freshwater lake in China and has provided local communities with valuable fisheries for centuries. However, we have only a limited knowledge of its ecosystem. In this study, a trophic model was constructed for the Lake Taihu ecosystem. This model was used to evaluate and analyze the food web structure and other properties of this ecosystem using data covering the period from 1991 to 1995. Using the model, we evaluated the impacts on local fisheries of various management scenarios comprising two basic management regimes: (1) setting fishing mortality for the top predator (large culters, Erythroculter mongolicus and Erythroculter ilishaeformis) to 0, 0.3, 0.6, 0.9 and 1.2, and (2) adjusting overall fishing effort to 0.25, 0.5, 0.75 and 1.25 times the current level. For both scenarios, fishery profit and cost were evaluated to provide an understanding of how components of the ecosystem interact. We identified possible causes of fishery overexploitation in the lake ecosystem and described the necessity of developing ecosystem-based management. The results showed that Lake Taihu had six theoretical trophic levels (TLs), with the trophic flows primarily occurring through the first five TLs. System properties such as transfer efficiency, Finn’s index, Finn’s mean length, connectance index, system omnivory index, primary production/respiration ratio, and net primary production all indicated that Lake Taihu was an immature, fairly simple ecosystem in which a relatively low fraction of total primary production was utilized. At the same time, the ecosystem was also experiencing high fishing pressure. Yet despite this, the low ascendency index (25.9%) and high system overhead ratio (74.1%) indicated that the system was highly developed and relatively stable, a condition that might result from the high degree of recycling in the system. Among the harvesting strategies considered, a strategy of either decreasing the fishing mortality of the top predator (large culters) to 0.3 or, alternatively, reducing the overall effort on the system by a factor of 0.75 appeared reasin
New Frontiers in the Matrix of Neuro-musculoskeletal Pain: Integrating Pain Mechanisms with Objective Physical Findings and Needling Strategies

Chronic pain states are characterized by profound changes in neuronal excitability and architecture in the pain matrix. These neuroplastic changes occur in the spinal cord, thalamic nuclei, cortical and limbic areas and may alter the threshold, intensity and affect of one’s pain experience. Spinal Segmental Sensitization (SSS) is a hyperactive state of the dorsal horn caused by bombardment of nociceptive impulses from sensitized and/or damaged tissue. Active (i.e., spontaneously painful myofascial trigger points [MTrPs]) are a very common source of persistent nociceptiona and sensitization of dorsal horn neurons that often results in SSS and chronic pain. Furthermore, recent studies of the biochemical milieu (using novel microanalytical techniques) and viscoelastic properties (using office-based diagnostic ultrasound) have revealed
Preventing Brucellosis in the Bedouin Society in Israel

Background: Brucellosis is endemic in the Bedouin population of southern Israel, where Poor hygiene and traditional practices including home dairy preparations, animal breeding methods contribute to disease spread. The raising of livestock has great importance in Bedouin culture. Commonly, herds of sheep, goats and camels are maintained in close proximity to living accommodations, resulting in a higher exposure to the disease. The Objectives of this study is to prevent Brucellosis in the Bedouin Society, by locating the source of infection and providing health education and promotion activates to families and Society. Methods: In Israel, Brucellosis is mandatorily notifiable since 1951. New cases are reported to the District Health Office (DHO) of the Ministry of Health and subsequently incidence rates or summarized. Epidemiological investigations that attempt to locate the source of infection preform control measures as a prevention program with health promotion and termination of infected herds if required with concurrent fair compensation of farmers. Results and Actions: The incidence of the disease is on the rise within this population. In 2003 the incidence was 18 per 100,000, yet in 2013 the incidence rate increased almost sevenfold. To control the problem, the Southern DHO established a prevention program. Veterinary services and Bedouin community leaders partnered with public health officials in order to improve herd’s vaccination rates, and to locate and eliminate infected stock. Despite these steps, the incidence continues to rise, reaching 154/100,000 in 2014. Conclusions: In order to eradicate brucellosis among the Negev Bedouins, health promotion steps are necessary, but not sufficient and a comprehensive Health Education intervention must be integrated as part of overall policy, including the proper examination of livestock, termination of infected herds, compensation of farmers and advanced culturally and socially sensitive media interventions.
Four Weeks of IV Iron Supplementation Reduces Perceived Fatigue and Mood Disturbance in Distance Runners

Purpose To determine the effect of intravenous iron supplementation on performance, fatigue and overall mood in runners without clinical iron deficiency. Methods Fourteen distance runners with serum ferritin 30–100 µg·L−1 were randomly assigned to receive three blinded injections of intravenous ferric-carboxymaltose (2 ml, 100 mg, IRON) or normal saline (PLACEBO) over four weeks (weeks 0, 2, 4). Athletes performed a 3,000 m time trial and 10×400 m monitored training session on consecutive days at week 0 and again following each injection. Hemoglobin mass (Hbmass) was assessed via carbon monoxide rebreathing at weeks 0 and 6. Fatigue and mood were determined bi-weekly until week 6 via Total Fatigue Score (TFS) and Total Mood Disturbance (TMD) using the Brief Fatigue Inventory and Brunel Mood Scale. Data were analyzed using magnitude-based inferences, based on the unequal variances t-statistic and Cohen's Effect sizes (ES). Results Serum ferritin increased in IRON only (Week 0: 62.8±21.9, Week 4: 128.1±46.6 µg·L−1; p = 0.002) and remained elevated two weeks after the final injection (127.0±66.3 µg·L−1, p = 0.01), without significant changes in Hbmass. Supplementation had a moderate effect on TMD of IRON (ES -0.77) with scores at week 6 lower than PLACEBO (ES -1.58, p = 0.02). Similarly, at week 6, TFS was significantly improved in IRON vs. PLACEBO (ES –1.54, p = 0.05). There were no significant improvements in 3,000 m time in either group (Week 0 vs. Week 4; Iron: 625.6±55.5 s vs. 625.4±52.7 s; PLACEBO: 624.8±47.2 s vs. 639.1±59.7 s); but IRON reduced their average time for the 10×400 m training session at week 2 (Week 0: 78.0±6.6 s, Week 2: 77.2±6.3; ES–0.20, p = 0.004). Conclusion During 6 weeks of training, intravenous iron supplementation improved perceived fatigue and mood of trained athletes with no clinical iron deficiency, without concurrent improvements in oxygen transport capacity or performance.
An Integration of Genome-Wide Association Study and Gene Expression Profiling to Prioritize the Discovery of Novel Susceptibility Loci for Osteoporosis-Related Traits

Osteoporosis is a complex disorder and commonly leads to fractures in elderly persons. Genome-wide association studies (GWAS) have become an unbiased approach to identify variations in the genome that potentially affect health. However, the genetic variants identified so far only explain a small proportion of the heritability for complex traits. Due to the modest genetic effect size and inadequate power, true association signals may not be revealed based on a stringent genome-wide significance threshold. Here, we take advantage of SNP and transcript arrays and integrate GWAS and expression signature profiling relevant to the skeletal system in cellular and animal models to prioritize the discovery of novel candidate genes for osteoporosis-related traits, including bone mineral density (BMD) at the lumbar spine (LS) and femoral neck (FN), as well as geometric indices of the hip (femoral neck-shaft angle, NSA; femoral neck length, NL; and narrow-neck width, NW). A two-stage meta-analysis of GWAS from 7,633 Caucasian women and 3,657 men, revealed three novel loci associated with osteoporosis-related traits, including chromosome 1p13.2 (RAP1A, p = 3.6×10−8), 2q11.2 (TBC1D8), and 18q11.2 (OSBPL1A), and confirmed a previously reported region near TNFRSF11B/OPG gene. We also prioritized 16 suggestive genome-wide significant candidate genes based on their potential involvement in skeletal metabolism. Among them, 3 candidate genes were associated with BMD in women. Notably, 2 out of these 3 genes (GPR177, p = 2.6×10−13; SOX6, p = 6.4×10−10) associated with BMD in women have been successfully replicated in a large-scale meta-analysis of BMD, but none of the non-prioritized candidates (associated with BMD) did. Our results support the concept of our prioritization strategy. In the absence of direct biological support for identified genes, we highlighted the efficiency of subsequent functional characterization using publicly available expression profiling relevant to the skeletal system in cellular or whole animal models to prioritize candidate genes for further functional validation.
Epitaxy-driven vertical growth of single-crystalline cobalt nanowire arrays by chemical vapor deposition

Highly oriented single-crystalline ferromagnetic Co nanowire (NW) arrays were synthesized on sapphire substrates via a single-step chemical vapor deposition (CVD) method. On an m-cut sapphire substrate, Co NWs were vertically grown in epitaxial relationship with the substrate without using any catalysts or templates. On an r-cut sapphire substrate, Co NWs were horizontally grown in two perpendicular directions. Furthermore, we report that the Co NWs were transformed into Co3O4 nanotubes by thermal annealing under dilute O2 conditions. Such formation of hollow structures is ascribed to favored outward diffusion of Co ions. The present vertically aligned arrays of single-crystalline Co NWs could be utilized for advanced magnetic memory applications owing to their uniform orientations.
A Mixed Model Approach to Genome-Wide Association Studies for Selection Signatures, with Application to Mice Bred for Voluntary Exercise Behavior

Selection experiments and experimental evolution provide unique opportunities to study the genetics of adaptation because the target and intensity of selection are known relatively precisely. In contrast to natural selection, where populations are never strictly “replicated,” experimental evolution routinely includes replicate lines so that selection signatures—genomic regions showing excessive differentiation between treatments—can be separated from possible founder effects, genetic drift, and multiple adaptive solutions. We developed a mouse model with four lines within a high running (HR) selection treatment and four nonselected controls (C). At generation 61, we sampled 10 mice of each line and used the Mega Mouse Universal Genotyping Array to obtain single nucleotide polymorphism (SNP) data for 25,318 SNPs for each individual. Using an advanced mixed model procedure developed in this study, we identified 152 markers that were significantly different in frequency between the two selection treatments. They occurred on all chromosomes except 1, 2, 8, 13, and 19, and showed a variety of patterns in terms of fixation (or the lack thereof) in the four HR and four C lines. Importantly, none were fixed for alternative alleles between the two selection treatments. The current state-of-the-art regularized F test applied after pooling DNA samples for each line failed to detect any markers. We conclude that when SNP or sequence data are available from individuals, the mixed model methodology is recommended for selection signature detection. As sequencing at the individual level becomes increasingly feasible, the new methodology may be routinely applied for detection of selection.
Evaluation of the Diagnostic Accuracy of Two Immunochromatographic Tests Detecting Campylobacter in Stools and Their Role in Campylobacter Infection Diagnosis

ABSTRACT The detection of campylobacters in stools is performed essentially by culture, but this technique has a low sensitivity. New detection methods are now available. Among them, immunochromatography tests (ICTs) are very attractive in that they offer a result within 15 min. However, previous studies suggest that these tests have a relatively low specificity. The objective of this study was to evaluate the performance of these tests. During the study period, all patients who consulted the emergency units and had a stool culture were included. Their stool samples were tested with two ICTs, Ridaquick Campylobacter and ImmunoCard STAT! Campy. Stools were also tested by a home-made PCR and two commercially available enzyme-linked immunosorbent assays (ELISAs) when one of the ICTs was positive. The composite reference standard (CRS) was defined as positive if the culture was positive or, in case of a negative culture, if the PCR and one of the ELISAs were positive simultaneously. Three hundred and five patients were included. Among the 50 positive specimens with Ridaquick Campylobacter, 47 were considered true positives by the CRS, corresponding to a positive predictive value (PPV) of 94.0%. Among the 52 positive specimens with ImmunoCard STAT! Campy, 44 were considered true positives by the CRS, corresponding to a PPV of 84.6%. The negative predictive values were estimated at 94.9 and 92.4% for the Ridaquick Campylobacter and ImmunoCard STAT! Campy tests, respectively. ICTs appear to be very efficient and allow a very rapid detection of campylobacters, which is important for treating early campylobacter infections with an adapted antibiotherapy.
A Comparative Study on Compressive and Flexural Strength of Concrete Containing Different Admixtures as Partial Replacement of Cement

Concrete is the most widely used material in the world today. This paper is about the comparative study of the flexural strength and compressive strength of concrete when different admixtures are used as partial replacement of cement in the concrete mix. The mineral admixtures that are used here are Silica Fume, Rice Husk Ash and Iron slag as partial replacement of cement. All these materials are industrial waste products and are abundantly available nowadays. These materials have high silica content and pozzolanic properties and can be effectively used as a replacement of cement during the formation of High Performance Concrete. Compressive and Flexural strength are the two most important characteristic of concrete and are calculated for the hardened concrete to analyze the load bearing capacity for design purposes. Thus for the effective judgment of type of mineral admixtures to be used a comparative study is very useful.
A Comparative Analysis of Distance Learning and Traditional Classroom Learning for MAS 602, MAS 603, and MAS 605 at Embry-Riddle Aeronautical University

Author: Mark C. Lyden Title: A Comparative Analysis of Distance Learning and Traditional Classroom Learning for MAS 602, MAS 603, and MAS 605 at Embry-Riddle Aeronautical University Institution: Embry-Riddle Aeronautical University Degree: Master of Aeronautical Science Year: 1994 To be competitive for tuition dollars, ERAU's distance learning program must meet the needs and demands of prospective students. Consideration must be given to the quality of the instruction over a distance compared to the traditional classroom method. The results of this investigation provide additional information vis-a-vis to the quality of the off-campus programs. The group for the study will be 80 traditional university students and 145 distance learning students who have participated in MAS 602, MAS 603, or MAS 605. The descriptive approach was used to investigate this problem. Test and assignment scores of the two groups were examined and compared to determine differences in performance as well as possible correlation between the two different teaching environments. The data was examined using a t-test. The results showed that there was a significant difference in the scores of the two groups for MAS 603; there was no significant differences shown for MAS 602 and MAS 605.
Drug discovery in prostate cancer mouse models

Introduction: The mouse is an important, though imperfect, organism with which to model human disease and to discover and test novel drugs in a preclinical setting. Many experimental strategies have been used to discover new biological and molecular targets in the mouse, with the hopes of translating these discoveries into novel drugs to treat prostate cancer in humans. Modeling prostate cancer in the mouse, however, has been challenging, and often drugs that work in mice have failed in human trials. Areas covered: The authors discuss the similarities and differences between mice and men; the types of mouse models that exist to model prostate cancer; practical questions one must ask when using a mouse as a model; and potential reasons that drugs do not often translate to humans. They also discuss the current value in using mouse models for drug discovery to treat prostate cancer and what needs are still unmet in field. Expert opinion: With proper planning and following practical guidelines by the researcher, the mouse is a powerful experimental tool. The field lacks genetically engineered metastatic models, and xenograft models do not allow for the study of the immune system during the metastatic process. There remain several important limitations to discovering and testing novel drugs in mice for eventual human use, but these can often be overcome. Overall, mouse modeling is an essential part of prostate cancer research and drug discovery. Emerging technologies and better and ever-increasing forms of communication are moving the field in a hopeful direction.