Miracle-dz/UniFAR-FTUs huggingface dataset:
Aerial laser scanning and imagery data fusion for road detection in city scale

This paper presents a workflow including a novel algorithm for road detection from dense LiDAR fused with high-resolution aerial imagery data. Using a supervised machine learning approach point clouds are firstly classified into one of three groups: building, ground, or unassigned. Ground points are further processed by a novel algorithm to extract a road network. The algorithm exploits the high variance of slope and height of the point data in the direction orthogonal to the road boundaries. Applying the proposed approach on a 40 million point dataset successfully extracted a complex road network with an F-measure of 76.9%.
Plasmonic resonances of metallic nanoparticles in arrays and in isolation

Plasmonics is the branch of photonics that is concerned with the interactions which take place between metallic structures and incident electromagnetic radiation. It is a field which has seen a recent resurgence of interest, predominantly due to the emerging fields of metamaterials and sub-wavelength optics. The original work contained within this thesis is concerned with the plasmonic resonances of metallic nanoparticles which can be excited with visible light. These structures have been placed in a variety of configurations, and the optical response of each of these configurations has been probed both experimentally, and with numerical simulations. The first chapter contains some background and describes some recent advances in the literature, set against the broad background of more general concepts which are important in plasmonics. The best starting point in describing the response of plasmonic systems is to consider individual metallic particles and this is the subject of the second chapter. Three separate modelling techniques are described and compared, and dark-field spectroscopy is used to produce experimental scattering spectra of single particles which support dipolar and higher order modes. Mie theory is used as a starting point in understanding these modes, and finite element method (FEM) modelling is used to make numerical comparisons with dark-field data. When two plasmonic particles are placed close to each other, interactions take place between them and their response is modified, sometimes considerably. This effect can be even stronger if particles are placed in large arrays. Interactions between the dipolar modes of gold particles form the basis of the third chapter. The discussion begins with pairs of particles, and the coupled dipole approximation (CDA) is introduced to describe the response. Ordered square arrays are considered and different modelling techniques are compared to experimental data. Also, random arrays have been investigated with a view to inferring the extinction spectrum of a single particle from a carefully chosen array of particles in which the inter-particle interactions are suppressed. The fourth chapter continues the theme of particles interacting in arrays, but the particles considered support quadrupolar modes (and they are silver instead of gold). The optical response is strongly modified, and an explanation is provided which overturns the accepted explanation. The final chapter of new results is somewhat different to the others in that a very different structure is considered and different parameters are extracted. Instead of far-field quantities, here, near-fields of composite structures are of interest; they can generate greatly enhanced fields in the vicinity of the structure. These enhanced fields, in turn, enhance the fluorescence and Raman emission of nearby dye molecules. A novel field integration technique is proposed which aims to mimic the experiments which were carried out using fluorescence confocal microscopy.
Does Hormonal Pleiotropy Shape the Evolution of Performance and Life History Traits?

SYNOPSIS Hormonal pleiotropy occurs when a part of the endocrine system (e.g., hormone concentrations) influences the expression of two or more phenotypes. Although hormonal pleiotropy may have similar evolutionary consequences as genetic pleiotropy, most conceptual and empirical work on its putative evolutionary consequences to date has focused on identifying whether the different components of an endocrine axis (titer, receptor expression, etc.) that affect trait expression are themselves able to evolve independently from one another. This is important because if these different components evolve together, the expression of two traits affected by the same hormone may be yoked and evolve non-independently. Here, we first describe methodological approaches used to identify how hormonal pleiotropy could cause the co-evolution of performance and life history traits. We then focus on a similar but less studied concept about how hormonal pleiotropy can affect phenotypic responses to selection. If the expression of two traits is affected by the same hormone, the magnitude of the phenotypic response to selection may be exacerbated or retarded compared to the absence of this hormonal pleiotropy. We use classical concepts from quantitative genetics to discuss an approach for identifying whether hormonal pleiotropy has such evolutionary consequences using data collected from longitudinal studies of wild animals. We develop a simple quantitative genetics model to derive predictions about the conditions under which hormonal pleiotropy would affect the response to selection. We focus on performance and life history traits and how the effects of hormonal pleiotropy on the evolution of these traits depend upon the genetic correlations between the hormone and traits as well as the direction and strength of selection on the two traits. Finally, we review the literature for examples that have estimated these model parameters to characterize the studies that have or have not found support for these model predictions.
Effectiveness of Virtual Reality Exercises in STroke Rehabilitation (EVREST): Rationale, Design, and Protocol of a Pilot Randomized Clinical Trial Assessing the Wii Gaming System

Background Evidence suggests that increasing intensity of rehabilitation results in better motor recovery. Limited evidence is available on the effectiveness of an interactive virtual reality gaming system for stroke rehabilitation. EVREST was designed to evaluate feasibility, safety and efficacy of using the Nintendo Wii gaming virtual reality (VRWii) technology to improve arm recovery in stroke patients. Methods Pilot randomized study comparing, VRWii versus recreational therapy (RT) in patients receiving standard rehabilitation within six months of stroke with a motor deficit of ≥3 on the Chedoke-McMaster Scale (arm). In this study we expect to randomize 20 patients. All participants (age 18–85) will receive customary rehabilitative treatment consistent of a standardized protocol (eight sessions, 60 min each, over a two-week period). Outcome measures The primary feasibility outcome is the total time receiving the intervention. The primary safety outcome is the proportion of patients experiencing intervention-related adverse events during the study period. Efficacy, a secondary outcome measure, will be measured by the Wolf Motor Function Test, Box and Block Test, and Stroke Impact Scale at the four-week follow-up visit. From November, 2008 to September, 2009 21 patients were randomized to VRWii or RT. Mean age, 61 (range 41–83) years. Mean time from stroke onset 25 (range 10–56) days. Conclusions EVREST is the first randomized parallel controlled trial assessing the feasibility, safety, and efficacy of virtual reality using Wii gaming technology in stroke rehabilitation. The results of this study will serve as the basis for a larger multicentre trial. ClinicalTrials.gov registration# NTC692523
Dry Shrinkage Features of High-strength Recycled Concrete

At first,the influence of recycled coarse and fine aggregate on dry shrinkage features of concrete was studied.It is indicated that the recycled aggregate makes significant impact on dry shrinkage features of concrete,particularly the fine aggregate.Through the optimization of the mix of recycled high-strength concrete,the dry shrinkage rate of coarse aggregate concrete was only slightly larger than that of the natural one.Bulking agent used in recycled concrete could compensate the shrinkage effectively to achieve the objective of micro-shrinkage.At the same time,it is shown that the impact of conservation in dry environment on recycled concrete strength is greater than that of ordinary one.Thus,more attention should be paid to the moisture in the conservation of recycled concrete.In addition,the shrinkage mechanism of recycled concrete was analyzed from the perspectives of interface structure and aggregate features.
Two-relay distributed switch and stay combining

We study a distributed version of switch-and-stay combining (DSSC) for systems that utilize two relays. In particular, four different scenarios are considered, depending on a) whether or not the source-destination channel is taken into account, and b) the type of relaying, i.e., decode and forward or amplify and forward. A performance analysis in terms of outage and bit error probability is presented, when operating over Rayleigh fading channels. Numerical results demonstrate that two-relay DSSC achieves the same diversity gain and outage performance as if the best relay is selected for each transmission slot, albeit simpler.
Time-varying linear systems and invariants of system equivalence

In the paper we consider time-varying systems with coefficients depending mero-morphically on time. In differential operator representations these systems are described by matrices over a skew polynomial ring with coefficients in the field of real meromorphic functions. Different kinds of indices (controllability, minimal, geometric and dynamical) are introduced and it is proved that they essentially coincide. The input module and the formal transfer matrix are defined and used for an algebraic description of time-varying systems. A characterization of system equivalence is given in these terms and also a complete list of invariants of similarity for time-varying state-space systems.
Mg2+-dependent translational speed bump acts to regulate gene transcription

The central dogma of molecular biology states that DNA is transcribed (by RNA polymerase) to messenger RNA that is then translated (by ribosomes) into protein (1). The regulation of gene expression can occur at any level: transcription, mRNA stability, translation that includes mRNA folding to reveal or occlude translation initiation sites, and protein modification and stability. In eukaryotes, the processes of transcription and translation are carried out in the cell nucleus and cytoplasm, respectively. In bacteria, which lack a nucleus, the processes of transcription and translation are coupled. This provides an evolutionary target that is unique to bacteria for controlling gene expression. Many gene regulatory mechanisms in bacteria use transcription–translation coupling to affect whether transcription elongation through specific single or multigene operons continues or terminates in response to changing concentrations of the metabolic product associated with a given operon. In bacteria, termination of transcription occurs when RNA polymerase is preceded by a stretch of RNA that is not being translated, which occurs in the 3′-untranslated RNA following the final translation termination codon of a given operon. Transcription termination in bacteria occurs by one of two mechanisms that is either dependent on the Rho transcriptional terminal factor or by the Rho-independent mechanism that involves the formation of a folded stem-loop structure in the RNA followed by a poly-U sequence (2⇓–4). Rho protein recognizes untranslated RNA that is rich in cytosine base residues (5). Suppression of transcription termination in gene regulation was first characterized as a mechanism to control the timing of gene expression during the infection growth cycle of bacteriophage λ in Escherichia coli (6). Here, antiterminator proteins, such as the λ N protein, must be transcribed, translated, and reach sufficient levels to bind termination sequences to prevent termination and allow transcription to continue into downstream genes … [↵][1]1Email: hughes{at}biology.utah. edu. [1]: #xref-corresp-1-1
Caffeine as an opioid analgesic adjuvant in fibromyalgia

Background Caffeine’s properties as an analgesic adjuvant with nonsteroidal anti-inflammatory drugs/acetaminophen are well documented. However, little clinical research has explored caffeine’s effects on opioid analgesia. This study assessed the effects of caffeine consumption on pain and other symptoms in opioid-using and nonusing chronic pain patients meeting the survey criteria for fibromyalgia. Materials and methods Patients presenting to a university-based pain clinic completed validated self-report questionnaires assessing symptoms. Patients (N=962) meeting the fibromyalgia survey criteria were stratified by opioid use and further split into groups based on caffeine amount consumed per day (no caffeine, or low, moderate, high caffeine). Analysis of covariance with Dunnett’s post hoc testing compared pain and symptom severity between the no caffeine group and the caffeine consuming groups. Results In opioid users, caffeine consumption had modest but significant effects on pain, catastrophizing, and physical function. Lower levels of pain interference were associated with low and moderate caffeine use compared to no caffeine intake. Lower pain catastrophizing and higher physical function were observed in all caffeine dose groups, relative to the no caffeine group. Lower pain severity and depression were observed only in the moderate caffeine group. In opioid nonusers, low caffeine intake was associated with higher physical function; however, no other significant effects were observed. Conclusion Caffeine consumption was associated with decreased pain and symptom severity in opioid users, but not in opioid nonusers, indicating caffeine may act as an opioid adjuvant in fibromyalgia-like chronic pain patients. These data suggest that caffeine consumption concomitant with opioid analgesics could provide therapeutic benefits not seen with opioids or caffeine alone.
Biological Synthesis of Metallic Nanoparticles by Bacteria, Fungi andPlants

Over the past few decades interest in metallic nanoparticles and their synthesis has greatly increased. This has resulted in the development of numerous ways of producing metallic nanoparticles using chemical and physical methods. However, drawbacks such as the involvement of toxic chemicals and the high-energy requirements of production make it difficult for them to be widely implemented. An alternative way of synthesising metallic nanoparticles is by using living organisms such as bacteria, fungi and plants. This “green” method of biological nanoparticle production is a promising approach that allows synthesis in aqueous conditions, with low energy requirements and low-costs. This review gives an overview of some of these environmentally friendly methods of biological metallic nanoparticle synthesis. It also highlights the potential importance of these methods in assessing nanoparticle risk to both health and the environment.
Statistical test for detecting community structure in real-valued edge-weighted graphs

We propose a novel method to test the existence of community structure in undirected, real-valued, edge-weighted graphs. The method is based on the asymptotic behavior of extreme eigenvalues of a real symmetric edge-weight matrix. We provide a theoretical foundation for this method and report on its performance using synthetic and real data, suggesting that this new method outperforms other state-of-the-art methods.
Rapamycin Attenuates the Development of Posttraumatic Epilepsy in a Mouse Model of Traumatic Brain Injury

Posttraumatic epilepsy is a major source of disability following traumatic brain injury (TBI) and a common cause of medically-intractable epilepsy. Previous attempts to prevent the development of posttraumatic epilepsy with treatments administered immediately following TBI have failed. Recently, the mammalian target of rapamycin complex 1 (mTORC1) pathway has been implicated in mechanisms of epileptogenesis and the mTORC1 inhibitor, rapamycin, has been proposed to have antiepileptogenic effects in preventing some types of epilepsy. In this study, we have tested the hypothesis that rapamycin has antiepileptogenic actions in preventing the development of posttraumatic epilepsy in an animal model of TBI. A detailed characterization of posttraumatic epilepsy in the mouse controlled cortical impact model was first performed using continuous video-EEG monitoring for 16 weeks following TBI. Controlled cortical impact injury caused immediate hyperactivation of the mTORC1 pathway lasting at least one week, which was reversed by rapamycin treatment. Rapamycin decreased neuronal degeneration and mossy fiber sprouting, although the effect on mossy fiber sprouting was reversible after stopping rapamycin and did not directly correlate with inhibition of epileptogenesis. Most posttraumatic seizures occurred greater than 10 weeks after TBI, and rapamycin treatment for one month after TBI decreased the seizure frequency and rate of developing posttraumatic epilepsy during the entire 16 week monitoring session. These results suggest that rapamycin may represent a rational treatment for preventing posttraumatic epilepsy in patients with TBI.
Use of the World Health Organization’s Medical Eligibility Criteria for Contraceptive Use Guidance in sub-Saharan African Countries: A Cross-Sectional Study

The revised 2015 World Health Organization guidance expanded the recommended contraceptive options available to breastfeeding women during the early postpartum period to include progestogen-only pills and implants, but a substantial number of surveyed country representatives indicated that as yet their national policies did not allow such women to use these methods at that time. Countries may benefit from support to incorporate MEC guidance into national service delivery guidelines. The revised 2015 World Health Organization guidance expanded the recommended contraceptive options available to breastfeeding women during the early postpartum period to include progestogen-only pills and implants, but a substantial number of surveyed country representatives indicated that as yet their national policies did not allow such women to use these methods at that time. Countries may benefit from support to incorporate MEC guidance into national service delivery guidelines. ABSTRACT Given recent updates to the postpartum contraception recommendations in the fifth edition of the Medical Eligibility Criteria for Contraceptive Use (MEC), published by the World Health Organization (WHO), the purpose of this qualitative study was to assess the extent to which national family planning policies in sub-Saharan African countries are in agreement with the WHO MEC, particularly with regard to postpartum contraceptive use. WHO headquarters sent questionnaires to country-level focal points to complete with their Ministry of Health counterparts. Between February and May 2016, 23 of 32 (72%) surveys were completed. All respondents reported that their countries had used the MEC document in the past, with most reporting that they had used the guidance as a reference (n = 20, 87%), for training purposes (n = 19, 83%), to change clinical practices (n = 17, 74%), and to develop national policies (n = 16, 70%). While many respondents (16, 70%) indicated their countries already include immediate postpartum intrauterine device insertion among breastfeeding women in their family planning policies, few reported currently allowing use of progestogen-only pills (n = 8, 35%) or implants (n = 8, 35%) during the immediate postpartum period (i.e., less than 48 hours after delivery) for breastfeeding women. A higher percentage of respondents indicated their countries allowed breastfeeding women the option of progestogen-only pills (n = 16, 70%) and implants (n = 13, 57%) between 48 hours and 6 weeks postpartum. Findings from this baseline assessment suggest that many countries may benefit from training and policy formulation support to adapt both new WHO MEC updates as well as existing recommendations from previous MEC revisions into national family planning guidelines.
The importance of cholesterol medication adherence: the need for behavioral change intervention programs

Lipid-lowering medications have been shown to be efficacious, but adherence is suboptimal. This is a narrative, perspective review of recently published literature in the field of medication adherence research for lipid-lowering medications. We provide an overview of the impact of suboptimal adherence and use a World Health Organization framework (patient, condition, therapy, socioeconomic, and health system-related systems) to discuss factors that influence hyperlipidemia treatment adherence. Further, the review involves an evaluation of intervention strategies to increase hyperlipidemia treatment adherence with a special focus on mHealth interventions, patient reminders on packaging labels, nurse- and pharmacist-led interventions, and health teams. It also highlights opportunities for pharmaceutical companies to support and scale such behavioral interventions. Medication adherence remains a challenge for the long-term management of chronic conditions, especially those involving asymptomatic disease such as hyperlipidemia. To engage patients and enhance motivation over time, hyperlipidemia interventions must be targeted to individual patients’ needs, with sequencing and frequency of contact tailored to the various stages of behavioral change.
Ocular allergy in the Asia Pacific region

Allergic conjunctivitis (AC) represents a spectrum of disorders, comprising seasonal allergic conjunctivitis (SAC), perennial allergic conjunctivitis (PAC), atopic keratoconjunctivitis (AKC), vernal keratoconjunctivitis (VKC) and giant papillary conjunctivitis. Of these ocular allergy types, SAC and PAC are the most common.The most striking difference within this group of ocular diseases is that SAC and PAC remain self-limited without ocular surface damage, while AKC and VKC can compromise the cornea, causing ulcers and scarring and can ultimately lead to vision loss. Data on AC in the Asia Pacific is scarce however some understanding of prevalence of the condition has been obtained from the International Study of Asthma and Allergies in Childhood (ISAAC) studies and more recently from the Allergies in Asia Pacific study as well as some information from individual country surveys. Unfortunately none of this data has been collected using validated survey instruments specifically designed for AC. Surveys such as ISAAC have been predominantly concerned with respiratory allergic symptoms with questions added that incorporate some ocular symptoms. These questionnaires do not detect individuals who may have AC in the absence of allergic rhinitis. Using hospital ophthalmology outpatient populations for prevalence studies of ocular allergy immediately introduces a bias towards the more severe, complex forms of the condition as patients with the milder forms of SAR and PAR will rarely present to a hospital outpatient clinic. There is a real need for the development of validated questionnaires specifically addressing ocular allergy. There are no widely accessible studies examining prevalence of the complex forms of ocular allergy (AKC, VKC) in Asia Pacific region. This review will provide an overview of ocular allergy, its classification, clinical presentation and differential diagnosis, and will also discuss what is known about the epidemiology of ocular allergy in the Asian Pacific region.