Miracle-dz/UniFAR-FTUs huggingface dataset:
TIGER (PANTHERA TIGRIS) AND DOMESTIC CAT (FELIS CATUS) IMMUNE RESPONSES TO CANARYPOX-VECTORED CANINE DISTEMPER VACCINATION

Abstract: Two methods for delivering a canarypox-vectored canine distemper vaccine to tigers (Panthera tigris) and domestic cats (Felis catus) were investigated. Eight tigers were divided randomly into two vaccination groups: subcutaneous injection or topical tonsillar application. Each tiger received 2 ml of canine distemper virus (CDV) vaccine (Merial Ferret Distemper Vaccine). Blood was collected from tigers on days 0, 21, 35 or 37, and 112 post–initial vaccination (PIV). Domestic cats were divided randomly into four treatment groups: saline injection (negative controls), low- and high-dose oral, and subcutaneous vaccinates. Blood was collected from domestic cats on days 0, 7, 21, and 28 and 165 or 208 PIV. Sera were tested for CDV antibodies by virus neutralization. All individuals were seronegative at the beginning of the study. One tiger vaccinated subcutaneously developed a titer of 32 by day 35, which reduced to 16 by day 112. Another tiger vaccinated by tonsillar application developed a titer of 8 on day 112. All other tigers remained seronegative. Cats that received saline injection or oral vaccination remained seronegative at each sampling time. Domestic cats vaccinated subcutaneously developed titers ranging from 4 to >128 by day 28, and those re-bled at day 166 had titers of 16 or 64. The disparity in response between domestic cats and tigers may be due to species differences or it may represent a dose-dependent effect. Subcutaneous vaccination with canarypox-vectored Purevax Ferret Distemper® is safe and elicits persistent antibody titers in domestic cats vaccinated parenterally.
HEMATOLOGY AND PLASMA CHEMISTRY VALUES IN BEACHED MAGELLANIC PENGUIN (SPHENISCUS MAGELLANICUS) IN NORTHERN ARGENTINA DURING THE NONBREEDING SEASON

Abstract: Seabirds have been widely used for monitoring the health of the oceans in diverse marine regions. Among low-cost survey strategies, systematic surveys of seabirds beached on coasts have been developed since the 20th century. However, these studies do not always address blood aspects. The assessment of the health status of birds based on the analysis of hematological and plasma chemistry is crucial to evaluate the overall health status profile of live organisms. Here, the authors study the variability of blood parameters by sex, age class, and year of beached Magellanic Penguin during the nonreproductive period in northern Argentina. Of 44 penguins, 77% were categorized as younger juveniles and the rest as older juveniles, and were captured and studied in coastal areas of Buenos Aires Province during the summers of 2017 and 2018. The mean body weight of beached penguins was affected by the age class of the individuals; most of the younger juveniles showed poor condition in terms of body mass (1,761 ± 235 g). No significant differences were observed in body weight between years and sex. Still, there were significant differences between years for alkaline phosphatase (ALP) and creatine phosphokinase (CPK) values. Twelve of the 20 blood parameters analyzed differ significantly with the age class of the beached penguins; younger juveniles were in a state of inanition. Our results may serve as a necessary first step in improving the conservation status of the Magellanic Penguin in nonbreeding grounds of Argentina, and call for a better knowledge of the health status of the species along its annual cycle.
EVALUATION OF 25-HYDROXYVITAMIN D IN HOFFMANN'S TWO-TOED SLOTHS (CHOLOEPUS HOFFMANNI) USING DRIED BLOOD SPOTS ANALYZED BY LIQUID CHROMATOGRAPHY–TANDEM MASS SPECTROMETRY

Abstract: Although biochemical analytes have typically been measured using serum or whole blood samples, an increasing number of assays are validated for measurement of analytes from dried blood spots (DBS) on filter paper. DBS techniques are minimally invasive, require only a small sample volume, and simplify processing, storage, and shipment of samples. These qualities make DBS-based assays ideal for sampling of wildlife species in both captive and field settings. In this study, a liquid chromatography–tandem mass spectrometry assay was evaluated for measurement of 25-hydroxyvitamin D in sloths. Paired serum and DBS samples were collected from nine healthy captive Hoffmann's two-toed sloths (Choloepus hoffmanni). Statistical analysis using Passing-Bablok regression analysis, Bland-Altman plots, and the Wilcoxon signed-rank tests found good agreement between 25-hydroxyvitamin D3 measurements in serum and DBS samples. Constant and proportional bias were absent. Results from this study support the use of DBS samples for the evaluation of vitamin D status in Hoffmann's two-toed sloths and provide a foundation for further studies to validate this technique.
What Does Personality Mean in the Context of Mental Health? A Topic Modeling Approach Based on Abstracts Published in Pubmed Over the Last 5 Years

Personality disorders (PDs) are one of the major problems for the organization of public health systems. Deepening the link between personality traits and psychopathological drifts, it seems increasingly essential for the often dramatic repercussions that PDs have on social contexts. Some of these disorders, such as borderline PD, antisocial PD, in their most tragic expression, are the basis of problems related to crime, sexual violence, abuse, and mistreatment of minors. Many authors propose a dimensional classification of personality pathology, which has received empirical support from numerous studies over the last 20 years based on more robust theoretical principles than those applied to current nosography. The present study investigates the nature of the research carried out in the last years on the personality in the clinical field exploring the contents of current research on personality relapses, evaluating, on the one hand, the emerging areas of greatest interest and others, those that they stopped generating sufficient motivations in scholars. This study evaluates text patterns regarding how the terms “personality” and “mental health” are used in titles and abstracts published in PubMed in the last 5 years. We use a topic analysis: Latent Dirichlet Allocation that expresses every report as a probabilistic distribution of latent topics that are represented as a probabilistic distribution of words. A total of 7,572 abstracts (from 2012 to 2017) were retrieved from PubMed for the query on “mental health” and “personality. ” The study found 30 topics organized in eight hierarchical clusters that describe the type of current research carried out on personality and its clinical relapse. The hierarchical clusters latent themes were the following: social dimensions, clinical aspects, biological issues, clinical history of PD, internalization and externalization symptoms, impulsive behaviors, comorbidities, criminal behaviors. The results indicate that the concept of personality is associated with a wide range of conditions. The study of personality and mental health still proceeds, mainly, according to a practical-clinical approach; too little moves, however, according to an innovative research approach, but the work shows the common commitment of scholars to a new way of dealing with the study of personality.
Principles of Mutual Information Maximization and Energy Minimization Affect the Activation Patterns of Large Scale Networks in the Brain

Successive patterns of activation and deactivation in local areas of the brain indicate the mechanisms of information processing in the brain. It is possible that this process can be optimized by principles, such as the maximization of mutual information and the minimization of energy consumption. In the present paper, I showed evidence for this argument by demonstrating the correlation among mutual information, the energy of the activation, and the activation patterns. Modeling the information processing based on the functional connectome datasets of the human brain, I simulated information transfer in this network structure. Evaluating the statistical quantities of the different network states, I clarified the correlation between them. First, I showed that mutual information and network energy have a close relationship, and that the values are maximized and minimized around a same network state. This implies that there is an optimal network state in the brain that is organized according to the principles regarding mutual information and energy. On the other hand, the evaluation of the network structure revealed that the characteristic network structure known as the criticality also emerges around this state. These results imply that the characteristic features of the functional network are also affected strongly by these principles. To assess the functional aspects of this state, I investigated the output activation patterns in response to random input stimuli. Measuring the redundancy of the responses in terms of the number of overlapping activation patterns, the results indicate that there is a negative correlation between mutual information and the redundancy in the patterns, suggesting that there is a trade-off between communication efficiency and robustness due to redundancy, and the principles of mutual information and network energy are important to network formation and its function in the human brain.
The Potential Relationship Between Leg Bone Length and Running Performance in Well‐Trained Endurance Runners

Abstract The present study aimed to determine the relationship between leg bone length and running performance in well-trained endurance runners. The lengths of the leg bones in 42 male endurance runners (age: 20.0 ± 1.0 years, body height: 169.6 ± 5.6 cm, body mass: 56.4 ± 5.1 kg, personal best 5000-m race time: 14 min 59 s ± 28 s) were measured using magnetic resonance imaging. The lengths of the femur and tibia were calculated to assess the upper and lower leg lengths, respectively. The total length of the femur + tibia was calculated to assess the overall leg bone length. These lengths of the leg bones were normalized with body height, which was measured using a stadiometer to minimize differences in body size among participants. The relative tibial length was significantly correlated with personal best 5000-m race time (r = -0.328, p = 0.034). Moreover, a trend towards significance was observed in the relative femoral length (r = -0.301, p = 0.053). Furthermore, the relative total lengths of the femur + tibia were significantly correlated with personal best 5000-m race time (r = -0.353, p < 0.05). These findings suggest that although the relationship between the leg bone length and personal best 5000-m race time was relatively minor, the leg bone length, especially of the tibia, may be a potential morphological factor for achieving superior running performance in well-trained endurance runners.
Fortification of Poly-γ-Glutamic Acid and γ-Aminobutyric Acid in Homogenized Hydroponic Ginseng Co-Fermented by Bacillus subtilis HA and Lactobacillus plantarum EJ2014

Homogenized hydroponic ginseng (HG) fortified with poly-γ-glutamic acid (γ-PGA) and γ-aminobutyric acid (GABA) was produced by a two-step fermentation using Bacillus subtilis and Lactobacillus plantarum. For optimized production of bioactive compounds, the precursor monosodium L-glutamate (MSG) as well as nutrients such as glucose and skim milk were added. The homogenized HG was pH 6.93 and had an acidity of 0.08%, and viable cell count of 6.13 log colony-forming unit (CFU)/mL. The first (alkaline) fermentation was performed at 42°C for 2 days in the presence of 5% MSG and 2% glucose. The fermented HG was pH 8.08 and had an acidity of 0.03%, a mucilage of 2.13%, a consistency of 0.79 Pa·sn, and viable cell count of 8.53 log CFU/mL. For the second (lactic) fermentation, the fermented HG was fortified with 5% skim milk, inoculated with 7.54 log CFU/mL of L. plantarum EJ2014, and was incubated at 30°C for 5 days; the resulting in pH 5.63 and had and acidity of 0.35, and viable cell count of 6.71 log CFU/mL (B. subtilis) and 9.23 log CFU/mL (L. plantarum). Moreover, MSG was completely bio-converted with producing 1.03% GABA. Therefore, novel co-fermentation using B. subtilis HA and L. plantarum EJ2014 fortified HG with functional components including γ-PGA, GABA, peptides, and probiotics.
A study of risk factors for the possible cases of acute occupational pesticide poisoning of orchard farmers in some parts of south Chungcheong province

Background The objective of the present study is to identify differences in the prevalence of acute occupational pesticide poisoning across Korean orchard farmers' farming characteristics and the risk factors that have an effect on acute occupational pesticide poisoning. Methods For 3 years (2014, 2015, and 2017), a questionnaire survey was conducted on 394 orchard farmers in some parts of south Chungcheong Province in relation to pesticide poisoning. 323 orchard farmers who responded to acute occupational pesticide poisoning were included for final analysis. With acute occupational pesticide poisoning as the dependent variable, a χ2 test and a multiple logistic regression analysis were conducted. Results The results of the prevalence of acute occupational pesticide poisoning across farming characteristics showed that the group wearing 4 or more pesticide personal protective equipment (PPE) had a lower prevalence of acute occupational pesticide poisoning than the group wearing 3 or less pesticide PPE (p < 0.05). Furthermore, an analysis by area of fruit farming revealed that the group with more than 12,000m2 in the area of fruit farming had a higher prevalence of acute occupational pesticide poisoning (p < 0.05). Orchard farmers mainly use a speed sprayer to spray pesticides, and the speed sprayer can be categorized by presence of cabin. The analysis of the prevalence of acute occupational pesticide poisoning by speed sprayer's cabin existence found that existence of speed sprayer's cabin did not show a statistically significant difference in the prevalence of acute occupational pesticide poisoning. Conclusions The present study analyzed the prevalence of acute occupational pesticide poisoning depending on the speed sprayer's cabin existence and found no significant difference. The fact that famers using the cabinless style speed sprayer shows a higher percentage in wearing PPE than those using the cabin style speed sprayer is suggested to elucidate the result. As the first study in Korea which examined the prevalence of acute occupational pesticide poisoning by speed sprayer's cabin existence, the present study proposes the expected effect that increase of wearing pesticide PPE along with employ of speed sprayer's cabin can reduce the prevalence of acute occupational pesticide poisoning among orchard farmers.
The Antioxidant Alpha-Lipoic Acid Inhibits Proliferation and Invasion of Human Gastric Cancer Cells via Suppression of STAT3-Mediated MUC4 Gene Expression

Background Metastasis and invasion are the main causes of mortality in gastric cancer. To improve the treatment of gastric cancer, the development of effective and innovative antitumor agents toward invasion and proliferation is needed. Alpha-lipoic acid (ALA), a naturally occurring thiol antioxidant, showed antiproliferative and cytotoxic effects on several cancers. So it is feasible to explore whether ALA can be used to inhibit proliferation and invasion in human gastric cancer. Methods The expression of MUC4 in human gastric cancer tissues was assayed by immunohistochemistry. Then, we performed in vitro cell proliferation and invasion analysis to explore the antitumor effect of ALA using AGS, BGC-823, and MKN-28 cells. To further explore the mechanism of ALA-mediated downregulation of MUC4, we cotransfected human gastric cancer cells with STAT3 siRNA and STAT3 overexpression construct. ChIP assays were carried out to find the relationship between MUC4 and STAT3. Results We found that the MUC4 gene was strongly expressed in human gastric cancer tissues. Meanwhile, ALA reduced proliferation and invasion of human gastric cancer cells by suppressing MUC4 expression. We also found that STAT3 was involved in the inhibition of MUC4 by ALA. Mechanistically, ALA suppressed MUC4 expression by inhibiting STAT3 binding to the MUC4 promoter region. Conclusion ALA inhibits both proliferation and invasion of gastric cancer cells by suppression of STAT3-mediated MUC4 gene expression.
Identification of Prognostic Dosage-Sensitive Genes in Colorectal Cancer Based on Multi-Omics

Several studies have already identified the prognostic markers in colorectal cancer (CRC) based on somatic copy number alteration (SCNA). However, very little information is available regarding their value as a prognostic marker. Gene dosage effect is one important mechanism of copy number and dosage-sensitive genes are more likely to behave like driver genes. In this work, we propose a new pipeline to identify the dosage-sensitive prognostic genes in CRC. The RNAseq data, the somatic copy number of CRC from TCGA were assayed to screen out the SCNAs. Wilcoxon rank-sum test was used to identify the differentially expressed genes in alteration samples with |SCNA| > 0.3. Cox-regression was used to find the candidate prognostic genes. An iterative algorithm was built to identify the stable prognostic genes. Finally, the Pearson correlation coefficient was calculated between gene expression and SCNA as the dosage effect score. The cell line data from CCLE was used to test the consistency of the dosage effect. The differential co-expression network was built to discover their function in CRC. A total of six amplified genes (NDUFB4, WDR5B, IQCB1, KPNA1, GTF2E1, and SEC22A) were found to be associated with poor prognosis. They demonstrate a stable prognostic classification in more than 50% threshold of SCNA. The average dosage effect score was 0.5918 ± 0.066, 0.5978 ± 0.082 in TCGA and CCLE, respectively. They also show great stability in different data sets. In the differential co-expression network, these six genes have the top degree and are connected to the driver and tumor suppressor genes. Function enrichment analysis revealed that gene NDUFB4 and GTF2E1 affect cancer-related functions such as transmembrane transport and transformation factors. In conclusion, the pipeline for identifying the prognostic dosage-sensitive genes in CRC was proved to be stable and reliable.
A Review of Using Common Spatial Pattern in Discrimination of Multiclass Motor Imagery–Based Brain-Computer Interface

Brain-computer interface (BCI) is now being one of the interesting and attractive topics for researchers in recent years. Common spatial pattern is the most common approach applied in motor imagery (MI)-based BCI because of its effectiveness in differentiating between 2 different MI classes. The main objective of this article is to review using common spatial pattern combining with different methods such as Hilbert transform, error correction output coding, wavelet transform, joint approximate diagonalization, and others to extract features that can be used to differentiate between multiclass MI-based BCI. Data set 2a from BCI competition IV is used as an example for all authors. In addition, results of using various classifiers are demonstrated.
Changes in Performance and Morning‐Measured Responses in Sport Rock Climbers

Abstract The aim of this study was to determine changes in climbers’ hormonal, cardiovascular, neuromuscular, sleep and fatigue status, and their relationship with performance and workloads during a sport rock climbing camp. Mean difficulty of individual leading climbing routes (mean Difficulty) was calculated for six male, intermediate level sport rock climbers participating in a 2-week camp in Orpierre. Additionally, each morning climbers were tested for: cortisol (d-Cortisol) and testosterone (d-Testosterone) concentrations, testosterone/cortisol ratio (T/C), heart rate and heart rate variability in supine (d-L-HR, d-L-SD1, d-L-SD2) and standing positions (d-S-HR, d-S-SD1, d-S-SD2), difference in S-HR and L-HR (HR-S-L), maximal voluntary hand grip strength (MVC), sleep duration (Sleep) and the self-perception of fatigue (M-Fatigue). Only M-Fatigue and d-Testosterone did not change significantly during the camp. Changes in other variables were large and significant, especially in the second week of the camp when the mean Difficulty was > 70%. The greatest changes were noted on the last day, when T/C, HR-S-L, and Sleep decreased and d-Cortisol, d-L-HR, and d-SD1 increased. The monitoring of the uncoupling of neuromuscular, hormonal, and cardiovascular markers can be instrumental in determining the level of athletes’ morning fatigue and readiness during a climbing camp. An increase in d-Cortisol and a decrease in T/C and HR-S-L are relevant indicators of overreaching in sport climbers.
Analysis of Daily Energy Expenditure of Elite Athletes in Relation to their Sport, the Measurement Method and Energy Requirement Norms

Abstract The purpose of this study was to estimate the daily energy expenditure (DEE) of 30 Polish elite athletes (15 women and 15 men aged 20 to 34 years) representing aerobic-endurance sports and speed-strength sports and to compare the obtained values with energy requirement norms recommended for athletes. Participants’ DEE was measured for seven days using a chronometric-tabular method and a kinematic method. The kinematic method provided significantly lower values of DEE, by 25%. Mean DEEs obtained for female aerobic-endurance and speed-strength athletes were 3042.6 ± 389 and 3255.7 ± 359 kcal/24h (a chronometric-tabular method) and 2230.9 ± 209 and 2346.3 ± 355 (the kinematic method), respectively. The differences between the two groups were not statistically significant (p > 0.05). Male athletes’ mean DEEs were significantly higher (p < 0.05): 3778.0 ± 657 and 4036.7 ± 532 kcal/24h (a chronometric-tabular method) for aerobic-endurance athletes and 2983.3 ± 545 and 2970.4 ± 345 (the kinematic analysis) for speed-strength athletes. As in the case of female athletes, the differences were not significant (p > 0.05). While no evidence was found that the type of sport alone could cause significant differences in the overall mean DEE between aerobic endurance athletes and speed-strength athletes, athletes’ sex significantly differentiated women from men in that respect (the latter’s DEE was significantly greater). Such differences were not noted, though, when athletes’ relative DEE (adjusted for body mass and body composition) were compared. The study revealed that the actual energy requirements of individual athletes can vary in a wide range and that they can be different from recommended energy intake.
Transcriptome Analysis Reveals the Molecular Mechanisms Underlying Adenosine Biosynthesis in Anamorph Strain of Caterpillar Fungus

Caterpillar fungus is a well-known fungal Chinese medicine. To reveal molecular changes during early and late stages of adenosine biosynthesis, transcriptome analysis was performed with the anamorph strain of caterpillar fungus. A total of 2,764 differentially expressed genes (DEGs) were identified (p ≤ 0.05, |log2 Ratio| ≥ 1), of which 1,737 were up-regulated and 1,027 were down-regulated. Gene expression profiling on 4–10 d revealed a distinct shift in expression of the purine metabolism pathway. Differential expression of 17 selected DEGs which involved in purine metabolism (map00230) were validated by qPCR, and the expression trends were consistent with the RNA-Seq results. Subsequently, the predicted adenosine biosynthesis pathway combined with qPCR and gene expression data of RNA-Seq indicated that the increased adenosine accumulation is a result of down-regulation of ndk, ADK, and APRT genes combined with up-regulation of AK gene. This study will be valuable for understanding the molecular mechanisms of the adenosine biosynthesis in caterpillar fungus.