Miracle-dz/UniFAR-FTUs huggingface dataset:
Full-scale demonstration of a floating seal for enhanced biological nutrient removal in a sequencing batch reactor establishing chemical-free environment in wastewater treatment at low carbon source availability

ABSTRACT Due to the cyclical nature and changing water levels in the sequencing batch reactor (SBR), oxygen diffusion and utilization can be difficult to control particularly in light of the need to conserve the limited quantity of carbon source required to optimize biological nutrient removal. During the fill period, oxygen penetration may be undesirable since heterotrophic and autotrophic organisms cause a reduction in the readily biodegradable carbon source (rbCOD). This carbon source is essential and often limited in the anaerobic and anoxic periods. As a consequence, unwanted oxygen penetration can hinder efficient biological phosphorus and nitrogen removal. The purpose of the present research was to verify the advantage of a floating seal on the continuously moving surface of an SBR reactor to minimize undesirable oxygen penetration. In the floating seal-covered SBR both nitrification and denitrification efficiency proved to be higher due to insulation, and even during wintertime biological phosphorus removal met target removals without chemical dosing. The SVI values in the two SBR trains proved to be close to each other, despite the high difference in chemical dosing. Having experienced the higher efficiency of the seal-covered train, microbiome compositions of the two differently operated systems were investigated to determine potential differences via 16S rRNA gene amplicon sequencing experiments. In the samples taken from the seal-covered system, higher ratios of fermentative bacteria and phosphate accumulating organisms (PAOs) as well as glycogen accumulating organisms (GAOs) could be observed as compared to the samples deriving from the uncovered system. Highlights Seal-covering the periodically decreasing open water surface increased SBR efficiency Seal-covering the open water surface increased nitrification efficiency by insulation No chemical dosing was necessary for phosphorous removal in the Test system Metagenome investigations provided almost doubled amount of fermentative bacteria Production of GAOs indicated nutrient deficiency due to phosphorous removal. GRAPHICAL ABSTRACT
Investigating the Relationship Between Childhood Music Practice and Pitch-Naming Ability in Professional Musicians and a Population-Based Twin Sample

Abstract The relationship between pitch-naming ability and childhood onset of music training is well established and thought to reflect both genetic predisposition and music training during a critical period. However, the importance of the amount of practice during this period has not been investigated. In a population sample of twins (N = 1447, 39% male, 367 complete twin pairs) and a sample of 290 professional musicians (51% male), we investigated the role of genes, age of onset of playing music and accumulated childhood practice on pitch-naming ability. A significant correlation between pitch-naming scores for monozygotic (r = .27, p < .001) but not dizygotic twin pairs (r = −.04, p = .63) supported the role of genetic factors. In professional musicians, the amount of practice accumulated between ages 6 and 11 predicted pitch-naming accuracy (p = .025). In twins, age of onset was no longer a significant predictor once practice was considered. Combined, these findings are in line with the notion that pitch-naming ability is associated with both genetic factors and amount of early practice, rather than just age of onset per se. This may reflect a dose–response relation between practice and pitch-naming ability in genetically predisposed individuals. Alternatively, children who excel at pitch-naming may have an increased tendency to practice.
Lysocin E Targeting Menaquinone in the Membrane of Mycobacterium tuberculosis Is a Promising Lead Compound for Antituberculosis Drugs

Tuberculosis remains a public health crisis and a health security threat. There is an urgent need to develop new antituberculosis drugs with novel modes of action to cure drug-resistant tuberculosis and shorten the chemotherapy period by sterilizing tissues infected with dormant bacteria. ABSTRACT Tuberculosis remains a public health crisis and a health security threat. There is an urgent need to develop new antituberculosis drugs with novel modes of action to cure drug-resistant tuberculosis and shorten the chemotherapy period by sterilizing tissues infected with dormant bacteria. Lysocin E is an antibiotic that showed antibacterial activity against Staphylococcus aureus by binding to its menaquinone (commonly known as vitamin K2). Unlike S. aureus, menaquinone is essential in both growing and dormant Mycobacterium tuberculosis. This study aims to evaluate the antituberculosis activities of lysocin E and decipher its mode of action. We show that lysocin E has high in vitro activity against both drug-susceptible and drug-resistant Mycobacterium tuberculosis var. tuberculosis and dormant mycobacteria. Lysocin E is likely bound to menaquinone, causing M. tuberculosis membrane disruption, inhibition of oxygen consumption, and ATP synthesis. Thus, we have concluded that the high antituberculosis activity of lysocin E is attributable to its synergistic effects of membrane disruption and respiratory inhibition. The efficacy of lysocin E against intracellular M. tuberculosis in macrophages was lower than its potent activity against M. tuberculosis in culture medium, probably due to its low ability to penetrate cells, but its efficacy in mice was still superior to that of streptomycin. Our findings indicate that lysocin E is a promising lead compound for the development of a new tuberculosis drug that cures drug-resistant and latent tuberculosis in a shorter period.
Development and validity of the subjective training quality scale

ABSTRACT This study aimed to define, develop, and validate a subjective scale of training quality. Two related studies were used to 1) define training quality and 2) develop and validate a subjective scale. Part One: a purposive sample of 15 sub-elite (i.e. national) and elite (i.e. international) swimmers participated in one, 20-30-min semi-structured interview. Thematic analysis of interview responses established three constructs to define training quality. These were the physical, technical, and mental aspects of training. Part Two: development of the Subjective Training Quality (STQ) scale based on the three constructs identified in Part One. 252 sub-elite and elite athletes, across eight sports completed the STQ scale. Cronbach’s alpha (α) assessed internal consistency, histogram plot analysis assessed face validity, and confirmatory factor analysis (CFA) compared physical, technical, and mental constructs with training quality. Root mean square error of approximation (RMSEA) and standardised root mean square residual (SRMR) evaluated CFA quality of fit. Physical, technical, and mental constructs demonstrated a high “acceptable” level of internal consistency (α = 0.85) and excellent face validity. Comparatively, the CFA quality of fit was “excellent” (RMSEA = <0.01 “good”, SRMR = 0.00 “perfect”). The STQ scale demonstrated excellent internal consistency and face validity, establishing capacity to monitor training quality. The STQ scale could be used in conjunction with traditional training monitoring tools to provide additional insight into athlete’s training quality. Further investigation is required to determine how the STQ scale may interact with subjective and objective training performance measures, and how it could be incorporated into daily training monitoring. Highlights Athletes perceive the subjective training quality (STQ) scale adequately represents the physical, technical, and mental constructs of training quality. Excellent internal consistency and confirmatory factor analysis fit demonstrates the STQ scale is an effective tool to monitor training quality. With additional validation, the STQ scale could be used in conjunction with traditional load monitoring tools to provide greater insight to an athlete’s training response, and subsequently inform training prescription.
Long-term effects of multiple concussions on prefrontal cortex oxygenation during repeated squat-stands in retired contact sport athletes

ABSTRACT Background This study investigated the long-term effects of multiple concussions on prefrontal cortex oxygenation using near-infrared spectroscopy (NIRS) during a squat-stand maneuver that activated dynamic cerebral autoregulation. Methods Active male retired contact sport athletes with a history of 3+ concussions (mTBI; n = 55), and active retired athletes with no concussion history (CTRL; n = 29) were recruited. Participants completed a 5-min squat-stand maneuve (10-s squat, 10-s stand, 0.05 Hz; 15 times). Oxygenated (O2Hb), deoxygenated (HHb), total (tHb) hemoglobin, and hemoglobin difference (HbDiff) were analyzed through the change in maximal and minimal values during the test (∆MAX), Z-scores, and standard deviations. Results mTBI group showed left prefrontal cortex O2Hb ∆MAX (p = 0.046) and HbDiff ∆MAX (p = 0.018) were significantly higher. Within-group analyses showed significantly higher left HHb ∆MAX (p = 0.003) and lower left HbDiff Z-scores (p = 0.010) only in the mTBI group. The CTRL group demonstrated significantly lower left HbDiff SD (p = 0.039), tHb Z-scores (p = 0.030), and HbDiff ∆MAX (p = 0.037) compared to right prefrontal cortex response. Conclusion These preliminary results suggest changes in prefrontal cortex oxygenation potentially affecting the brain’s ability to adapt to changing cerebral perfusion pressure after multiple previous concussions.
Development of a diarrhoea severity scoring scale in a passive health facility-based surveillance system

Background Diarrhoeal disease remains a leading cause of death among children mostly in low and middle-income countries. Factors contributing to disease severity are complex and there is currently no consensus on a scoring tool for use in community-based studies. Methods Data were collected during a passive surveillance system in an outpatient health facility in Lusaka, Zambia from March 2019 to July 2019. Diarrhea episodes were assessed for severity using an in-house severity scoring tool (CIDRZ) and previously published scores (Vesikari, Clark, CODA, and DHAKA). The CIDRZ score was constructed using fieldworker-reported clinical signs and exploratory factor analysis. We used precision-recall curves measuring severe diarrhoea (i.e., requiring intravenous rehydration or referred for hospital admission) to determine the best performing scores. Then, we used Cronbach’s alpha to assess the scale’s internal consistency. Finally, we used Cohen’s kappa to assess agreement between the scores. Results Of 110 diarrhea episodes, 3 (3%) required intravenous rehydration or were referred for hospital admission. The precision-recall area under the curve of each score as a predictor of severe diarrhoea requiring intravenous rehydration or hospital admission was 0.26 for Vesikari, 0.18 for CODA, 0.24 for Clark, 0.59 for DHAKA, and 0.59 for CIDRZ. The CIDRZ scale had substantial reliability and performed similarly to the DHAKA score. Conclusions Diarrhoea severity scores focused on characteristics specific to dehydration status may better predict severe diarrhea among children in Lusaka. Aetiology-specific scoring tools may not be appropriate for use in community healthcare settings. Validation studies for the CIDRZ score in diverse settings and with larger sample sizes are warranted.
A low‐cost, sensitive and specific PCR‐based tool for rapid clinical detection of HLA‐B*35 alleles associated with delayed drug hypersensitivity reactions

HLA (HLA) alleles are risk factors for CD8+ T‐cell‐mediated drug hypersensitivity reactions. However, as most HLA associations are incompletely predictive and/or involve risk alleles at low frequency, costly sequence‐based typing can elude an economically productive cost: benefit ratio for clinical validation studies and diagnostic and/or preventative screening. Hence rapid and low‐cost detection assays are now required, both for single alleles but also across risk loci associated with broader multi‐disease risk; exemplified by associations with diverse alleles in HLA‐B*35, including HLA‐B*35:01 and green tea‐ or co‐trimoxazole‐induced liver injury. Here, we developed a cost‐effective (<$10USD) qPCR assay for rapid (<2.5 h) clinical detection of HLA‐B*35 alleles. The assay was validated using 430 DNA samples with previous American society for histocompatibility and immunogenetics‐accredited sequence‐based high‐resolution HLA typing, positively detecting all HLA‐B*35 allelic variants in our cohort, and as expected by primer design, the six samples that expressed low‐frequency B*78:01. The assay did not result in positive detection for any negative control allele. With expected detection of B*35 and B*78, our assay sensitivity (95% CI, 95.07%–100.00%) and specificity (95% CI, 98.97%–100.00%) of 100% using as low as 10 ng of DNA provides a reliable HLA‐B*35 screening tool for clinical validation and HLA–risk‐based prevention and diagnostics.
Project Icarus: Astronomical Considerations Relating to the Choice of Target Star

In this paper we outline the considerations required in order to select a target star system for the Icarus interstellar mission. It is considered that the maximum likely range for the Icarus vehicle will be 15 light-years, and a list is provided of all known stars within this distance range. As the scientific objectives of Icarus are weighted towards planetary science and astrobiology, a final choice of target star(s) cannot be made until we have a clearer understanding of the prevalence of planetary systems within 15 light-years of the Sun, and we summarize what is currently known regarding planetary systems within this volume. We stress that by the time an interstellar mission such as Icarus is actually undertaken, astronomical observations from the solar system will have provided this information. Finally, given the high proportion of multiple star systems within 15 light-years (including the closest of all stars to the Sun in the {\alpha} Centauri system), we stress that a flexible mission architecture, able to visit stars and accompanying planets within multiple systems, is desirable. This paper is a submission of the Project Icarus Study Group.
Workplace violence in the Australian and New Zealand midwifery workforce: A scoping review

Abstract Aim The aim of the study is to identify and map what is known about workplace violence involving midwives in Australia and New Zealand. Background Research from the United Kingdom demonstrates that workplace violence within maternity services is a pervasive issue with significant and wide‐ranging clinical, individual and organisational consequences. To date, little is known about this issue within Australian and New Zealand maternity services. Evaluation A scoping review, guided by Arksey and O′Malley's framework, was conducted. Reporting followed the Preferred Reporting Items for Systematic Reviews and Meta‐Analyses extension for Scoping Reviews checklist. Just one identified study aimed to explore midwives' experiences of workplace violence. A further nine arrived at related results or themes. Key issues Workplace violence is present in a variety of forms across maternity services in Australia and New Zealand. Its prevalence is, however, yet to be understood. Workplace violence causes physical and mental health issues for midwives, premature workforce attrition, and jeopardizes the quality and safety of maternity care. Conclusions Workplace violence has been acknowledged as one of the key contributing factors towards premature attrition from the midwifery profession, with new graduate midwives most likely to leave. With the midwifery workforce ageing and evidence of serious clinical implications emerging, workplace violence needs urgent research and organisational attention. Implications for nursing management Workplace violence is a key contributing factor towards recruitment and retention challenges for managers. To help tackle this, managers have a key role to play in identifying and effectively addressing workplace violence by acting as positive role models, taking a zero‐tolerance approach and fostering collegial relationships. Managers, holding key clinical leadership positions, are pivotal to ensuring all complaints raised are handled with transparency and consistency regardless of one's position within the clinical hierarchy and organisational structure.
Examining protective factors for substance use problems and self-harm behavior during adolescence: A longitudinal co-twin control study

Abstract Sports participation, physical activity, and friendship quality are theorized to have protective effects on the developmental emergence of substance use and self-harm behavior in adolescence, but existing research has been mixed. This ambiguity could reflect, in part, the potential for confounding of observed associations by genetic and environmental factors, which previous research has been unable to rigorously rule out. We used data from the prospective, population-based Child and Adolescent Twin Study in Sweden (n = 18,234 born 1994–2001) and applied a co-twin control design to account for potential genetic and environmental confounding of sports participation, physical activity, and friendship quality (assessed at age 15) as presumed protective factors for adolescent substance use and self-harm behavior (assessed at age 18). While confidence intervals widened to include the null in numerous co-twin control analyses adjusting for childhood psychopathology, parent-reported sports participation and twin-reported positive friendship quality were associated with increased odds of alcohol problems and nicotine use. However, parent-reported sports participation, twin-reported physical activity, and twin-reported friendship quality were associated with decreased odds of self-harm behavior. The findings provide a more nuanced understanding of the risks and benefits of putative protective factors for risky behaviors that emerge during adolescence.
Identification of risk factors for air traffic controllers’ unsafe acts based on online reviews

Online reviews may influence unsafe acts and are significant in the context of big data. This study acquired online reviews related to air traffic control from social media websites. The word frequency statistics and coding of negative comments were taken to mine risk factors. Combined with the human factors analysis and classification system (HFACS), a conceptual model of the risk factors associated with the unsafe acts of air traffic controllers (ATCers) was constructed. The results indicate that the frequency of risk factors in online reviews, ranked from high to low, is organizational influences, ATCers' adverse states, environmental factors and unsafe supervision. Organizational influences, environmental factors and unsafe supervision indirectly affect the unsafe acts through the ATCers’ adverse states. It is demonstrated that the combination of HFACS and online reviews to identify risk factors enables the identification of problems in the air traffic control industry and demands of ATCers.
Tooth enamel ESR dosimetry for Hiroshima ‘black rain’ zone residents

Abstract Electron spin resonance (ESR) dosimetry was applied to human tooth enamel in order to obtain individual absorbed doses for victims of the Hiroshima bomb who lived in the ‘black rain’ area. The so-called ‘black rain’ fell in the form of precipitation on the western part of Hiroshima city and the northwestern suburbs within a few hours after the explosion of the atomic bomb on 6 August 1945, and exposed the population in this area. Only three tooth samples were collected from this area. Since the teeth were located at positions 1, 2 and 4, only the lingual portion was used for the analysis. The results showed that the excess dose after subtracting natural radiation for one (position 4; hh1) was background, for the second (position 2; hh2) it was 133 mGy, and for the other (position 1; hh3) it was 243 mGy. Based on these results, we further investigated the radiation dose attributed to dental X-rays and head CT scan. Such dose of the hh3 radiographic examination was estimated to be 57–160 mGy, which implies an additional exposure around 135 mGy after subtraction. On the other hand, the dose data of hh1 after subtracting dental X-rays was negative. This may mean that such additional doses are an overestimation. In addition, the effect of sunlight should be considered, which is the same direction of overestimation. As a result, the residual dose of 140 mGy suggests the inclusion of radiation from the ‘black rain. ’
Upregulated PD-1 signaling antagonizes glomerular health in aged kidneys and disease

With an aging population, kidney health becomes an important medical and socioeconomic factor. Kidney aging mechanisms are not well understood. We previously showed that podocytes isolated from aged mice exhibit increased expression of programmed cell death protein 1 (PD-1) surface receptor and its 2 ligands (PD-L1 and PD-L2). PDCD1 transcript increased with age in microdissected human glomeruli, which correlated with lower estimated glomerular filtration rate and higher segmental glomerulosclerosis and vascular arterial intima-to-lumen ratio. In vitro studies in podocytes demonstrated a critical role for PD-1 signaling in cell survival and in the induction of a senescence-associated secretory phenotype. To prove PD-1 signaling was critical to podocyte aging, aged mice were injected with anti–PD-1 antibody. Treatment significantly improved the aging phenotype in both kidney and liver. In the glomerulus, it increased the life span of podocytes, but not that of parietal epithelial, mesangial, or endothelial cells. Transcriptomic and immunohistochemistry studies demonstrated that anti–PD-1 antibody treatment improved the health span of podocytes. Administering the same anti–PD-1 antibody to young mice with experimental focal segmental glomerulosclerosis (FSGS) lowered proteinuria and improved podocyte number. These results suggest a critical contribution of increased PD-1 signaling toward both kidney and liver aging and in FSGS.