Miracle-dz/UniFAR-FTUs huggingface dataset:
Efficacy of radial extracorporeal shockwave therapy in rehabilitation following arthroscopic rotator cuff repair: A STROBE compliant study

Rotator cuff tear is a common cause of shoulder pain and disability. Arthroscopic rotator cuff repair (ARCR) is performed to treat a torn tendon. Postoperative joint immobilization is essential, but it is a problem that needs to be addressed in the rehabilitation process. This study aimed to evaluate the effects of radial extracorporeal shock wave therapy (rESWT) in patients who underwent ARCR and required active movement after the immobilization period. This study was an open-label, prospective, single-arm trial of 30 inpatients aged >18 years who underwent ARCR. A total of 6 rESWT sessions, along with the conventional rehabilitation program for ARCR patients, were provided at the hospital’s sports rehabilitation center for 2 weeks. The application sites of rESWT are periscapular muscles (supraspinatus, infraspinatus, teres minor, and rhomboid). Evaluations were conducted 3 time points—baseline, immediately after the first session of rESWT, and after 2 weeks of intervention. The outcome measures were the numeric pain rating scale for pain, and shoulder flexion, scaption flexion, abduction, horizontal adduction, external rotation, and internal rotation for shoulder range of motion. For shoulder function, disabilities of the arm, shoulder and hand, shoulder pain and disability index, and simple shoulder test were used, and muscle strength was expressed by grip strength. supraspinatus and infraspinatus evaluated thickness, tone, and stiffness. The muscle strength (95% CI, –3.554 to –0.073) and supraspinatus tone (P = .017) showed significant changes immediately after the first session of rESWT. Further, there was significant improvement in ROM (P < .01); shoulder function (P < .01); and muscle strength (95% CI, –3.561 to –0.625), supraspinatus stiffness (95% CI, –67.455 to –26.345), and infraspinatus stiffness (P = .045) after 2 weeks of intervention. However, muscle thickness and tone were significantly improved only in supraspinatus (P = .044, P = .040). Rehabilitation with radial extracorporeal shock wave therapy additionally applied to the periscapular muscles in patients who started active movement in rehabilitation after arthroscopic rotator cuff repair is effective for shoulder function and muscle properties (muscle strength, thickness, tone, and stiffness). However, a randomized controlled trial is needed to further assess the effects of radial extracorporeal shock wave therapy alone.
Multiomics Molecular Research into the Recalcitrant and Orphan Quercus ilex Tree Species: Why, What for, and How

The holm oak (Quercus ilex L.) is the dominant tree species of the Mediterranean forest and the Spanish agrosilvopastoral ecosystem, “dehesa. ” It has been, since the prehistoric period, an important part of the Iberian population from a social, cultural, and religious point of view, providing an ample variety of goods and services, and forming the basis of the economy in rural areas. Currently, there is renewed interest in its use for dietary diversification and sustainable food production. It is part of cultural richness, both economically (tangible) and environmentally (intangible), and must be preserved for future generations. However, a worrisome degradation of the species and associated ecosystems is occurring, observed in an increase in tree decline and mortality, which requires urgent action. Breeding programs based on the selection of elite genotypes by molecular markers is the only plausible biotechnological approach. To this end, the authors’ group started, in 2004, a research line aimed at characterizing the molecular biology of Q. ilex. It has been a challenging task due to its biological characteristics (long life cycle, allogamous, high phenotypic variability) and recalcitrant nature. The biology of this species has been characterized following the central dogma of molecular biology using the omics cascade. Molecular responses to biotic and abiotic stresses, as well as seed maturation and germination, are the two main objectives of our research. The contributions of the group to the knowledge of the species at the level of DNA-based markers, genomics, epigenomics, transcriptomics, proteomics, and metabolomics are discussed here. Moreover, data are compared with those reported for Quercus spp. All omics data generated, and the genome of Q. ilex available, will be integrated with morphological and physiological data in the systems biology direction. Thus, we will propose possible molecular markers related to resilient and productive genotypes to be used in reforestation programs. In addition, possible markers related to the nutritional value of acorn and derivate products, as well as bioactive compounds (peptides and phenolics) and allergens, will be suggested. Subsequently, the selected molecular markers will be validated by both genome-wide association and functional genomic analyses.
Analysis of Sentiments and Emotions about Sinovac Vaccine Using Naive Bayes

Tujuan:Banyak negara di dunia telah berusaha mengendalikan dampak pandemi COVID-19 melalui penggunaan vaksin. vaksin sinovac merupakan salah satu vaksin populer yang telah digunakan di beberapa negara termasuk Indonesia. Sejak hadirnya vaksin sinovac, persepsi masyarakat baik di lapangan maupun di media sosial semakin muncul antara setuju dan tidak setuju dengan vaksin tersebut. Persepsi masyarakat dunia di media sosial dapat dianalisis untuk mengetahui kategori sentimen dan tingkat emosional masyarakat terhadap penerimaan vaksin Sinovac.Perancangan/metode/pendekatan:Analisis dapat dilakukan melalui data mining yang menggunakan algoritma Naive Bayes untuk menghitung probabilitas dan statistik sehingga setiap opini dapat diklasifikasikan dalam kategori sentimen positif, negatif, atau netral. Dalam penelitian ini, sumber analisis data adalah persepsi publik yang mengandung kata kunci “sinovac” dari twitter. Pengujian menggunakan sentimen, sentimen, dan library syuzhet menunjukkan bahwa sentimen positif lebih tinggi daripada negatif dan netral. Sentimen negatif paling dipengaruhi oleh tingkat emosional kesedihan dan kemarahan. Sedangkan sentimen positif sangat dipengaruhi oleh kategori senang dan emosi campur aduk. Kategori emosi campuran lebih sesuai dengan sentimen positif.Hasil:Klasifikasi emosi terhadap data tweet dalam penelitian ini menunjukkan bahwa kategori emosi kegembiraan, dan campuran memiliki persentase tertinggi yang mengandung polaritas sentimen positif. Berdasarkan penelitian ini, kata kunci sinovac cenderung memunculkan sentimen positif. Polaritas mempengaruhi emosi, namun tidak sebaliknya. Karena terlihat bahwa nilai akurasi pada klasifikasi polaritas (dengan kedua library) telah meningkat ketika fitur emosi tidak diikutkan. Sedangkan nilai akurasi pada klasifikasi emosi justru meningkat ketika fitur polaritas diikutkan.Keaslian/ state of the art:Metode Naive Bayes (library setiment) dan metode Valence Shifter (library sentimentr) yang digunakan dalam analisis sentimen pada penelitian ini menunjukkan bahwa sentimen positif lebih tinggi daripada netral dan negatif. Hasil persentase sentimen positif oleh metode Valence Shifter lebih rendah daripada metode Naive Bayes. Pada metode Valence Shifter cenderung menghasilkan agregat yang lebih kecil antara hasil persentase sentimen positif dibanding netral dan negatif.
Tumblr Facts: Antecedents of Self-Disclosure across Different Social Networking Sites

Previous research investigating antecedents of online self-disclosure pointed out two perspectives: social compensation and enhancement hypotheses, showing controversial findings. Furthermore, most contributions have focused on social networking sites (SNSs) considered mainstream, like Facebook and Instagram, and such results are often considered universally valid for all SNSs. Tumblr is a less-studied SNS with peculiar features—such as anonymity, higher control over the presentation of personal aspects, supportive communities—that could particularly lead individuals to self-disclose. As prior contributions highlighted that the features and affordances could define how a medium will be used, this paper aims to investigate the antecedents of online self-disclosure on Tumblr and other mainstream SNSs. We run a survey on 559 Tumblr users (aged 13–70; M = 28.86; SD = 12.34). T-test showed that Tumblr users have a higher willingness to self-disclose on Tumblr compared to another SNSs (t = 22.44, p < 0.001). A path analysis model confirmed the predictive role of some psychological variables on self-disclosure on Tumblr but not on mainstream SNSs. In particular, self-disclosure on Tumblr was predicted by self-esteem, negative emotionality, and preference for online social interactions, which was in turn predicted by social anxiety. These findings partially supported both social compensation and enhancement hypotheses, indicating that the phenomenon is more complex than expected.
A Deep Multichannel Network Model for Driving Behavior Risk Classification

Driving behavior risk classification is a crucial issue in transportation systems because the prediction of vehicle hazard levels in advance can effectively reduce the occurrence of unnecessary traffic accidents. This paper proposes a novel Deep Multichannel Network Model (DMNM) for driving behavior risk classification. Based on real historical driving data, we present a driving behavior portrait framework with multidimensional factors and a dimensionless loss polymerization method. In this approach, first, we divide the related factors into three dimensions by their work methods, which are the inputs of the network. Second, the data of three original dimensions are extracted through fully connected layers to obtain embedding dimensions. Third, a new dimension indefensible factor is obtained by filter operation to eliminate the correlation between external factors and internal factors, which denotes the degree that the internal abnormal operational behavior can be explained by the external environment. Last, we regard the driving information as four channels of driving behaviors and extract the channel information through convolutional neural networks (CNNs). The numerical calculation and comparison results with real traffic data demonstrates the superior performance of our framework, and the accuracy of the proposed method in vehicle hazard classification is 95%.
The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities

Abstract Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V. thapsus L. for the first time and investigate its phylogenetic relationship in Scrophulariaceae. The assembled chloroplast genome is a circular 153,338 bp sequence, including a large single copy (LSC) region of 84,627 bp, a small single copy (SSC) region of 17,829 bp and a pair of inverted repeats (IRs) of 25,441 bp. The genome contains 135 genes, including 86 protein coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that V. thapsus is closely associated with V. chinense and V. phoeniceum.
A transcriptomic-guided strategy used in identification of a wheat rust pathogen target and modification of the target enhanced host resistance to rust pathogens

Transcriptional reprogramming is an essential feature of plant immunity and is governed by transcription factors (TFs) and co-regulatory proteins associated with discrete transcriptional complexes. On the other hand, effector proteins from pathogens have been shown to hijack these vast repertoires of plant TFs. Our current knowledge of host genes' role (including TFs) involved in pathogen colonization is based on research employing model plants such as Arabidopsis and rice with minimal efforts in wheat rust interactions. In this study, we begun the research by identifying wheat genes that benefit rust pathogens during infection and editing those genes to provide wheat with passive resistance to rust. We identified the wheat MYC4 transcription factor (TF) located on chromosome 1B (TaMYC4-1B) as a rust pathogen target. The gene was upregulated only in susceptible lines in the presence of the pathogens. Down-regulation of TaMYC4-1B using barley stripe mosaic virus-induced gene silencing (BSMV-VIGS) in the susceptible cultivar Chinese Spring enhanced its resistance to the stem rust pathogen. Knockout of the TaMYC4-1BL in Cadenza rendered new resistance to races of stem, leaf, and stripe rust pathogens. We developed new germplasm in wheat via modifications of the wheat TaMYC4−1BL transcription factor.
Deciphering the Regulatory Circuits of RA3 Replication Module - Mechanisms of the Copy Number Control

The RA3 plasmid, the archetype of IncU incompatibility group, represents a mosaic-modular genome of 45.9 kb. The replication module encompasses repA and repB (initiator) surrounded by two long repetitive sequences DR1 and DR2 of unknown function. Here, we mapped the origin of replication oriV to the 3′ end of repB and showed that oriV was activated by the transcription coming from orf02revp in the adjacent stability module. Using various in vivo and in vitro methods we demonstrated that the repB expression proceeded either from repBp located in the intergenic repA-repB region or from the upstream strong repAp that was autoregulated by RepA. Additionally, the repBp activity was modulated by the transcription from the overlapping, divergently oriented repXp. Both repXmRNA (antisense for repAmRNA) and its small polypeptide product, RepX, were strong incompatibility determinants. Hence, we showed that the sophisticated RA3 copy number control combined the multivalent regulation of repB expression, RepB titration by DR1, and transcriptional activation of oriV, dependent on the RA3 global regulatory network. Similarly organized replicons have been found in diverse bacterial species confirming the significance of these mechanisms in establishing the IncU plasmids in a broad spectrum of hosts.
Usefulness of volunteer urgent mobile health clinics in improving cost-effective healthcare in the Al-Qassim Region, Saudi Arabia

Mobile clinics are generally customized vehicles equipped with important medical equipment and staff to provide primary health services for populations at risk, enforce disease prevention, and improve access to chronic health management, at reduced costs. The present study evaluated the usefulness and effectiveness of volunteer mobile clinics in providing healthcare in different medical specialties in rural area hospitals in Saudi Arabia. The study also estimated the cost of providing such healthcare facilities and stakeholder satisfaction through the use of a standardized questionnaire. A total of 1299 patients attended the 36 mobile clinics’ setup with 39 volunteer consultants in five hospitals namely Al- Nabahanyah, Abanat, Qibah, and Qusiba. The age of the patients ranged between 1 to 80 years. The average cost per patient was reduced to 150 SAR which is 25% lesser than that of the national average cost of consultation (200 SAR). Based on the survey results it was seen that the overall satisfaction of patient services offered by mobile is very high (87.4%) while it ranged between 80-95% in different hospitals. However, the response rate was very low and ranged between 16-31% while the average response rate was 21.8%.
Longitudinal Associations of Physical Activity Patterns and the Environment: An 18-Year Follow-Up to the MESA Study

Introduction: Cross-sectional association between the neighborhood-built environment and physical activity (PA) has been demonstrated previously, indicating the importance of neighborhood perception characteristics such as walkability, safety, and the connectivity of streets on PA levels. Our study aimed to assess the longitudinal data from participants of the Multi-Ethnic Study of Atherosclerosis (MESA) to evaluate the potential relationship between perceived environment and PA patterns. Methods: We analyzed data from a subset of participants (n = 3097) with available PA data who participated in a prospective cohort conducted from 2000 to 2018. The exposure variables were the perceived aspects of the neighborhood environment and the perception of safety, and the outcome was patterns of PA. Patterns were defined as categories reflecting meeting versus not meeting PA guidelines over time. We created the following categories: adopters (individuals who did not meet guidelines at baseline but met guidelines at Exam 6), relapsers (individuals who met guidelines at baseline but did not meet guidelines at Exam 6), maintainers (individuals who met guidelines both at baseline and Exam 6), and insufficiently active (individuals who did not meet guidelines at either baseline or Exam 6). The maintainers’ group was considered the reference category. We estimated the relative risk to assess the magnitude effect of the association between environmental perceptions and the outcome. Results: Individuals who reported that lack of parks and playgrounds was “not a problem” in their neighborhood had a 2.3-times higher risk of decreasing their physical activity (i.e., the “relapser” category) compared to maintainers. After full adjustment, perceiving poor sidewalks as “somewhat a serious problem” was associated with a 64% lower risk of becoming an adopter than a maintainer. When compared to those who perceive the neighborhood as “very safe”, perception of the neighborhood as “safe” to “not at all safe” (ratings 3, 4, and 5, respectively, on the perceived safety scale) was significantly associated with being classified in the adopter category. Conclusions: As the first longitudinal study of the association of perceived environment and physical activity within the MESA cohort, we conclude that a few aspects are longitudinally associated with being physically active among adults.
The Influence of Online Brand Community Identity and Trust on Sustainable Customer Loyalty

Based on Social Identity Theory and Trust Theory, this paper discusses the impact of online brand community identity and trust on customer engagement, as well as the impact of customer engagement on customer loyalty. The results show that the two community factors have a significant impact on customer engagement, and customer engagement has a positive correlation with customer loyalty. These results reflect that online brand community identity and trust have positive impact on customer engagement, which increases the motivation of customers to participate in community activities, when customers obtain greater satisfaction and perceived benefits from community activities, the satisfaction and perceived benefits can be transformed into customers' sustainable stickiness and loyalty to the brands. In addition, customer engagement plays a partial intermediary role between online brand community identity, trust and customer loyalty. The results of this study are helpful to improve the management of online brand community, provide companies with ideas to improve business model, innovation, and bring new experience and value to companies and customers.
Gaia EDR3 Data For Three Young Stellar Objects

We present Gaia Early Data Release 3 (Gaia EDR3) high accurate astrometric and photometric data and also Catalina Sky Survey (CSS ) phase-dependent light curves for three Young Stellar Objects (YSO). They are LRL 245, 2MASS J04300424+3533238, and CVSO 592. These tree YSOs are presented as periodic variables in the Catalina Surveys Data Release-1 (CSDR1) data base. CSS phase-dependent curve of LRL 245 shows periodicity with period P=234.66 days and amplitude ∆m≈4.0 mag. For this object high-resolution spectra in H-band (from 1.51 to 1.69 µm) was obtained by the APOGEE instrument. LAMOST telescope moderate-resolution CCD spectra is available for object 2MASS J04300424+3522238 only. The spectra shows clear features of M dwarfs.
Surgical site infection in upper extremity fracture: Incidence and prognostic risk factors

Upper extremity fractures (UEF) occurred in about 0.67% of males and females at some point in their lifetime. Surgical treatment has the advantage of good functional recovery, however, the occurrence of surgical site infection (SSI) affects the clinical outcome of operation. Currently, there are few studies focused on SSI of UEF. Consecutive patients with UEF and underwent surgeries from January 2010 to February 2021 were recruited. Demographic data, surgical related variables and laboratory test index of these patients were extracted and collected from the electronic medical records and picture archiving and communication system by well-trained investigators. Receiver operating characteristic (ROC) analysis was performed to detect the optimum cut-off value for continuous variables. Multivariate logistic regression analysis was performed to identify independent risk factors of SSI. In total, 286 patients with a mean age of 44.4 ± 16.6 years were identified for inclusion, 59.8% patients diagnosed with fracture of radius and ulna and 40.2% fractures located in the humerus, closed and open fractures were occurred in 252 and 34 adult patients respectively. 7.3% UEF patients were encountered with SSI, incidence of superficial and deep infection was 6.3% and 1.0%. Open fracture (OR, 8.33; P, .000), operation time longer than 122 minutes (OR, 3.12; P, .036), intraoperative blood loss more than 135 mL (OR, 3.98; P, .009) and albumin (ALB) lower than 40.8 g/L (OR, 3.60; P, .015) were demonstrated as independent risk factors of SSI. Adequate preoperative evaluation, careful intraoperative manipulation, and timely and appropriate postoperative interventions should be formulated to reduce the incidence of SSI in patients with the above perioperative high-risk factors.
Changes in the avifauna of a forest relict in the peri-urban fringe of Bogotá over fourteen years

Over several centuries, the native vegetation of the flat part of the Bogotá Savanna has been almost completely replaced by crops, pastures and urbanization. The last remnant of this vegetation is a small forest (10 hm2), located at Hacienda Las Mercedes on the northern edge of the city of Bogotá. The reduced size and isolation of the forest, aggravated by the uncontrolled growth of invasive vegetation (lianas and wild blackberry) has resulted in the loss of many species. However, in recent years the forest has been subject to rehabilitation actions and currently the area is immersed in a reserve where more extensive restoration programs are planned. In order to evaluate changes in the bird community to estimate the effects of restoration actions, the avifauna present in 2001–2002 and in 2014 was recorded by visual and auditory records at fixed points in the forest. Twenty-seven forest species were found in the first census and 30 in the second, and the relative abundances of at least a third of them also increased over the 13 years, indicating a positive result in the recovery of the forest. The results highlight the recovery capacity of the degraded ecosystems and the importance of continuing with restoration actions in the reserve area.