Miracle-dz/UniFAR-FTUs huggingface dataset:
Modulation of Sex Pheromone Discrimination by a UDP-Glycosyltransferase in Drosophila melanogaster

The detection and processing of chemical stimuli involve coordinated neuronal networks that process sensory information. This allows animals, such as the model species Drosophila melanogaster, to detect food sources and to choose a potential mate. In peripheral olfactory tissues, several classes of proteins are acting to modulate the detection of chemosensory signals. This includes odorant-binding proteins together with odorant-degrading enzymes (ODEs). These enzymes, which primarily act to eliminate toxic compounds from the whole organism also modulate chemodetection. ODEs are thought to neutralize the stimulus molecule concurrently to its detection, avoiding receptor saturation thus allowing chemosensory neurons to respond to the next stimulus. Here, we show that one UDP-glycosyltransferase (UGT36E1) expressed in D. melanogaster antennal olfactory sensory neurons (OSNs) is involved in sex pheromone discrimination. UGT36E1 overexpression caused by an insertion mutation affected male behavioral ability to discriminate sex pheromones while it increased OSN electrophysiological activity to male pheromones. Reciprocally, the decreased expression of UGT36E1, controlled by an RNAi transgene, improved male ability to discriminate sex pheromones whereas it decreased electrophysiological activity in the relevant OSNs. When we combined the two genotypes (mutation and RNAi), we restored wild-type-like levels both for the behavioral discrimination and UGT36E1 expression. Taken together, our results strongly suggest that this UGT plays a pivotal role in Drosophila pheromonal detection.
Families under pressure: stress and quality of life in parents of children with an intellectual disability

Objective To evaluate stress and quality of life in parents of children with an intellectual disability (moderate–severe–profound), who attend a Child and Adolescent Mental Health Intellectual Disability Service (CAMHS ID), and to estimate the perceived levels of challenging behaviour and satisfaction with supports. Methods Data from children attending the service from 2014 to 2017, along with clinician and parent rating scales were collected. Results Most children had medical comorbidities, autism spectrum disorder (ASD), and challenging behaviours. Half had a diagnosis of a mental health disorder. Less than half received respite care. Challenging behaviours and ASD were found to be correlated with increased parental stress while perception of support was inversely correlated with stress. Intellectual disability, ASD, and parental stress were correlated with a decrease in perceived family quality of life. Conclusions This study concurs with previous studies, outlining that parents of children with intellectual disability, in particular, where there is a diagnosis of comorbid ASD and challenging behaviour, experience increased psychological distress and lower quality of life.
Incorporation characteristics of exogenous 15N-labeled thymidine, deoxyadenosine, deoxyguanosine and deoxycytidine into bacterial DNA

Bacterial production has been often estimated from DNA synthesis rates by using tritium-labeled thymidine. Some bacteria species cannot incorporate extracellular thymidine into their DNA, suggesting their biomass production might be overlooked when using the conventional method. In the present study, to evaluate appropriateness of deoxyribonucleosides for evaluating bacterial production of natural bacterial communities from the viewpoint of DNA synthesis, incorporation rates of four deoxyribonucleosides (thymidine, deoxyadenosine, deoxyguanosine and deoxycytidine) labeled by nitrogen stable isotope (15N) into bacterial DNA were examined in both ocean (Sagami Bay) and freshwater (Lake Kasumigaura) ecosystems in July 2015 and January 2016. In most stations in Sagami Bay and Lake Kasumigaura, we found that incorporation rates of deoxyguanosine were the highest among those of the four deoxyribonucleosides, and the incorporation rate of deoxyguanosine was approximately 2.5 times higher than that of thymidine. Whereas, incorporation rates of deoxyadenosine and deoxycytidine were 0.9 and 0.2 times higher than that of thymidine. These results clearly suggest that the numbers of bacterial species which can incorporate exogenous deoxyguanosine into their DNA are relatively greater as compared to the other deoxyribonucleosides, and measurement of bacterial production using deoxyguanosine more likely reflects larger numbers of bacterial species productions.
Synthesis of Injectable Shear-Thinning Biomaterials of Various Compositions of Gelatin and Synthetic Silicate Nanoplatelet.

Injectable shear-thinning biomaterials (iSTBs) have great potential for in situ tissue regeneration through minimally invasive therapeutics. Previously, an iSTB was developed by combining gelatin with synthetic silicate nanoplatelets (SNPs) for the potential application to hemostasis and endovascular embolization. Hence, we synthesize iSTBs by varying compositions of gelatin and SNPs to navigate their material, mechanical, rheological and bioactive properties. All of the compositions (each component %; 1.5 to 4.5% / total solid ranges; 3 to 9%) that we tested were injectable through both 5 Fr general catheter and 2.4 Fr microcatheter by manual pressure. In our results, an increase of gelatin contents causes the decrease of swellability, increase porosity, increase degradability and injection force during iSTB fabrication. On the other hands, the amount of SNPs in composite hydrogels are mainly required to decrease degradability and increase shear thinning properties of iSTB.Finally, in vitro and in vivo biocompatibility tests showed that the 1.5-4.5% range Gelatin-SNP iSTBs were not toxic to the cells and animals. All results demonstrated that the iSTB can be modulated with specific properties for unmet clinical needs. Understanding of mechanical and biological consequences of the changing gelatin-SNP ratios through this study will shed light on the biomedical applications of iSTB on specific diseases. This article is protected by copyright. All rights reserved.
Diagnosis of Left Ventricular Diastolic Dysfunction Using Cardiac Magnetic Resonance Imaging: Comparison of Volume-Time Curves Derived from Long- and Short-Axis Cine Steady-State Free Precession Datasets

Abstract Purpose To evaluate the diagnostic performance of diastolic function parameters derived from long-axis (LAX) planimetry compared with short-axis (SAX) volumetry in cardiac magnetic resonance imaging. Materials and Methods Cine steady-state free precession (SSFP) datasets of 15 healthy participants (8 young and 7 middle aged) and 25 patients with echocardiographically proven diastolic dysfunction (9 mild, 9 moderate, and 7 severe) were retrospectively included. Volume-time curves for assessing left ventricular (LV) function were obtained by manually contouring the LV endocardial borders in SAX and LAX datasets. The time needed for contouring was recorded for each dataset. The following LV parameters were determined: end-diastolic volume (EDV), end-systolic volume (ESV), ejection fraction (EF), myocardial mass (MM), time to peak filling rate (TPFR), normalized peak filling rate (nPFR), and the ratio of early to late peak filling rate (E/A ratio). A Wilcoxon signed-rank test was used to compare subgroups based on age and severity of diastolic dysfunction for statistical differences. Intraclass correlation coefficients were used to assess intermethod and interobserver reliability. Results Accuracy for the diagnosis of diastolic dysfunction was highest for E/A (mild diastolic dysfunction) and nPFR (any stage of diastolic dysfunction) derived from LAX datasets (E/A: area under the curve (AUC) = 0.97, sensitivity of 68 % and specificity of 100 %; nPFR: AUC = 0.84, sensitivity of 84 % and specificity of 80 %). Diastolic parameters showed a moderate to good intraclass correlation between both methods. The mean differences in EDV, ESV, EF, and MM were 5.3 ml, 1.9 ml, 3.5 %, and 11 g, respectively (each p < 0.001). Significantly less time was needed to derive volume-time curves from LAX images (median 14:45 min, interquartile range 14:15–15:53 min versus median 29:25 min, interquartile range 28:12–32:22 min; p = 0.001). The interobserver reliability was generally good to excellent. Conclusion Diastolic function parameters derived from left ventricular LAX planimetry have high diagnostic performance and can be obtained in significantly less time compared with SAX volumetry. These findings may pave the way for routine use of LAX planimetry in the clinical diagnosis of diastolic dysfunction. Key points: Diastolic function parameters derived from long-axis datasets have high diagnostic performance. Generation of volume-time curves using long-axis datasets requires significantly less time. This time savings may allow use of cardiac MRI for the diagnosis of diastolic dysfunction in the clinical routine. Citation Format Schaafs LA, Wyschkon S, Elgeti M et al. Diagnosis of Left Ventricular Diastolic Dysfunction Using Cardiac Magnetic Resonance Imaging: Comparison of Volume-Time Curves Derived from Long- and Short-Axis Cine Steady-State Free Precession Datasets. Fortschr Röntgenstr 2020; 192: 764 – 775
First principles study of electronic structure and thermoelectric transport in tin selenide and phase separated tin selenide–copper selenide alloy

The electronic structure and thermoelectric transport in SnSe and its alloy with Cu2Se have been studied using the first principles technique and semi classical Boltzmann transport theory. Our study reveals that SnSe is p-type with indirect band gap of 0.66 eV, while the alloy is phase separated and n-type with negligible indirect band gap of 0.064 eV. In both cases, two fold degeneracy in band extrema have been observed within the range of 25 meV. Delocalization of Se lone pair has been observed due to Cu substitution in Sn sites, which is supposed to lower its lattice thermal conductivity. A chemical potential map has been generated obeying thermodynamic restrictions to predict the possible existence of secondary phases. Our study shows the existence of SnSe2 as a secondary phase, while the possibility of Cu2Se as a secondary phase is negligible due to its higher formation energy. We calculated the transport coefficients as a function of carrier concentration and temperature to understand the range of optimized thermoelectric performance. The transport coefficients are similar along in plane direction whereas significant deviation is observed along the cross plane direction due to anisotropy in effective masses in SnSe. The effective masses are more isotropic in alloy than SnSe, thus transport properties show less anisotropy along three directions. Significant contribution of bipolar transport is observed in SnSe, while that is not noticed in the alloy. The behaviors of the Seebeck coefficients in both cases are discussed in terms of Mott’s theory and density of states modification near Fermi energy. Electron mobilities limited by acoustic phonon, ionized impurities, alloy scattering and inter carrier scattering have been examined relying on deformation potential approach and effective mass theory. The results indicate that acoustic phonon scattering is dominant scattering mechanism in SnSe over inter carrier scattering, whereas for the alloy the former contribute very weakly. Ionized impurity scattering and inter carrier scattering are most dominant in the alloy. Alloy scattering with U = 2 eV also contribute significantly.
Heat-treated human platelet pellet lysate modulates microglia activation, favors wound healing and promotes neuronal differentiation in vitro

Abstract The neurorestorative efficacy of human platelet lysates in neurodegenerative disorders is still under investigation. Platelets prepared from standard and pathogen reduced platelet concentrates were pelletized, washed, concentrated, and subjected to freeze-thawing. The lysate was heated to 56°C for 30 min and characterized. Toxicity was evaluated using SH-SY5Y neuroblastoma, BV-2 microglial, and EA-hy926 endothelial cells. Inflammatory activity was tested by examining tumor necrosis factor (TNF) and cyclooxygenase (COX)-2 expressions by BV-2 microglia with or without stimulation by lipopolysaccharides (LPS). The capacity to stimulate wound healing was evaluated by a scratch assay, and the capacity to differentiate SH-SY5Y into neurons was also examined. Platelet lysates contained a range of neurotrophins. They were not toxic to SH-SY5Y, EA-hy926, or BV-2 cells, did not induce the expression of TNF or COX-2 inflammatory markers by BV-2 microglia, and decreased inflammation after LPS stimulation. They stimulated the wound closure in the scratch assay and induced SH-SY5Y differentiation as revealed by the increased length of neurites as well as β3-tubulin and neurofilament staining. These data confirm the therapeutic potential of platelet lysates in the treatment of disorders of the central nervous system and support further evaluation as novel neurorestorative biotherapy in preclinical models.
Are family medicine residents physically active? And do they counsel their chronically ill patients about physical activity? A cross-sectional study among residents of the family medicine joint program, eastern province, Saudi Arabia -

Background: Physical activity is a major factor in both preventing chronic illness and in controlling it in already diseased patients. It has been established that a physically active physician may be more likely to counsel patients about the benefits of physical activity and patients tend to adhere to exercise regimens when advised by a physician they think of as a role model. Objective: To determine the amount of physical activity the family medicine’s residents adhere to and to determine if family medicine residents practice what they counsel to their patients regarding physical activity. Materials and Methods: All family medicine residents in all of the training levels were recruited to take part in the International Physical Activity Questionnaire (IPAQ) survey voluntarily. Levels of physical activity were divided into three categories: low, moderate, and high, according to the guidelines of data processing of the IPAQ. Section two of the survey assessed whether residents in fact counseled patients with chronic prevalent diseases (coronary artery disease, diabetes mellitus, obesity, etc.) about physical activity and the ranking of the most important health determinants according to them. Result: The sample size consisted of 80 participants, all residents of the program from R1 to R4. We have found that the majority >70% of them had low level of physical activity. The majority (96%) did counsel their patients about physical activity especially when the patient had diabetes. Conclusion: Although residents of the joint family medicine program of the eastern province of the Kingdom of Saudi Arabia were not, self-reportedly, physically active themselves, they were active in patient counseling regarding the importance of physical activity in achieving global health and well-being.
Impact of Daily Physical Activity as Measured by Commonly Available Wearables on Meal Time Glucose Control in Type 1 Diabetes.

OBJECTIVE In contrast with exercise, or structured physical activity (PA), glycemic disturbances due to daily unstructured PA in patients with type 1 diabetes (T1D) is largely under researched, with limited information on treatment recommendations. We present results from retrospective analysis of data collected under patients' free-living conditions that illuminate the association between PA, as measured by an off-the-shelf activity tracker, and postprandial BG control. RESEARCH DESIGN AND METHODS Data from 37 patients with T1D during two clinical studies with identical data collection protocols were analyzed retrospectively: four weeks of continuous glucose monitoring, carbohydrate intake, insulin injections, and PA (assessed via wearable activity tracker) were collected in free-living conditions. Five-hour glucose area under curves (GAUC) following the last-bolused meal of every day were computed to assess postprandial glucose excursions, and their relation with corresponding antecedent PA was analyzed using linear mixed effects regression models, accounting for meal, insulin, and current glycemic state. RESULTS Datasets yielded 845 days of data from 37 subjects (22.8±11.6 days/subject); post-meal GAUC was negatively associated with total daily PA measured by step count (p=.025), and total time spent performing higher than light intensity PA (p=.042). Patients with higher median total daily PA exhibited lower average postprandial GAUC (p<.01). Additional analyses indicated that daily PA likely presents an immediate and delayed impact on glucose control. CONCLUSION Daily PA assessed by commonly available sensors is significantly associated with glycemic exposure after an evening meal, indicating that quantitative assessment of PA may be useful in mealtime treatment decisions.
Sirtuin 1 regulates mitochondrial function and immune homeostasis in respiratory syncytial virus infected dendritic cells

Respiratory syncytial virus (RSV) is the major cause of lower respiratory tract infection in children worldwide. Sirtuin 1 (SIRT1), a NAD+ dependent deacetylase, has been associated with induction of autophagy, reprogramming cellular metabolism, and regulating immune mediators. In this study, we investigated the role of SIRT1 in bone marrow dendritic cell (BMDC) function during RSV infection. SIRT1 deficient (SIRT1 -/-) BMDC showed a defect in mitochondrial membrane potential (Δ⍦m) that worsens during RSV infection. This defect in Δ⍦m caused the generation of elevated levels of reactive oxygen species (ROS). Furthermore, the oxygen consumption rate (OCR) was reduced as assessed in Seahorse assays, coupled with lower levels of ATP in SIRT1-/- DC. These altered responses corresponded to altered innate cytokine responses in the SIRT1-/- DC in response to RSV infection. Reverse Phase Protein Array (RPPA) functional proteomics analyses of SIRT1-/- and WT BMDC during RSV infection identified a range of differentially regulated proteins involved in pathways that play a critical role in mitochondrial metabolism, autophagy, oxidative and ER stress, and DNA damage. We identified an essential enzyme, acetyl CoA carboxylase (ACC1), which plays a central role in fatty acid synthesis and had significantly increased expression in SIRT1-/- DC. Blockade of ACC1 resulted in metabolic reprogramming of BMDC that ameliorated mitochondrial dysfunction and reduced pathologic innate immune cytokines in DC. The altered DC responses attenuated Th2 and Th17 immunity allowing the appropriate generation of anti-viral Th1 responses both in vitro and in vivo during RSV infection thus reducing the enhanced pathogenic responses. Together, these studies identify pathways critical for appropriate DC function and innate immunity that depend on SIRT1-mediated regulation of metabolic processes.
Emodin Scavenging of Superoxide Radical Includes π–π Interaction. X-Ray Crystal Structure, Hydrodynamic Voltammetry and Theoretical Studies

The naturally occurring anthraquinone emodin is found in many plants that have been part of traditional Chinese medicine (TCM) for thousands of years. Recent pharmacological studies suggest that emodin might be a valuable therapeutic option for the treatment of various diseases. We describe the antioxidant effects of emodin on the superoxide radical. Our techniques include X-ray crystallography, density functional theory (DFT), and a recently developed cyclovoltammetry improvement, the rotating ring-disk electrode (RRDE) method. X-ray results show offset π–π stacking of emodin units in the crystal, and this type of interaction is supported by the DFT, which indicates one superoxide interacting via π–π stacking with the quinone moiety, by transferring one electron to the ring, and inducing some quinone aromatization. The second superoxide seems to form a stable complex after interacting with the H(hydroxyl) in position 3 of emodin. We show that one molecule of emodin sequesters two molecules of superoxide: one forming a complex with H(hydroxyl) in position 3, and the other due to π–π oxidation of superoxide and emodin ring reduction. We conclude that emodin is a very strong antioxidant. Color variation in the voltaic cell was observed during the RRDE study. This was analyzed and explained using a mini-grid gold electrode for UV-Vis spectroscopy in the voltaic cell.
Placental abnormalities differ in small for gestational age neonates in relation to their prenatal sonographic abdominal circumference measurements

Abstract Background Antenatal detection of abdominal circumference (AC) <10th percentile, among small for gestational age (SGA) neonates, probably reflects the severity of their growth restriction. We aimed to study neonatal outcome and placental pathology among SGA neonates in correlation to their AC measurements. Methods Maternal and neonatal computerized medical records and placental histopathology reports of all SGA neonates, (neonatal birth-weight ≤10th percentile), born between 24 and 42 weeks, during 2015–2018 were reviewed. Included cases with fetal biometric measurements conducted up to 7 days prior labor. Results were compared between cases with sonographic antenatal AC <10th percentile and neonates with sonographic antenatal AC ≥10th percentile. Placental lesions were classified according to “Amsterdam” Placental workshop criteria. Results The AC <10th percentile group (n = 148) was characterized by higher rate of nulliparity (p = .003), and induction of labor (p = .009), as compared to the AC ≥10th percentile group (n = 41). There were no between groups differences in the rate of maternal BMI (kg/m2), hypertensive disorders, diabetes or smoking. Neonatal hypoglycemia was more common in the AC <10th percentile group as compared to the AC ≥10th percentile group (p = .04). Placentas from the AC <10th percentile group were smaller (p < .001), with more MVM lesions (p = .02) and chronic villitis (p = .04). By multivariate regression analysis, AC <10th percentile and maternal hypertensive disorders, were found to be independently associated with placental MVM lesions, aOR = 2.43 (95% CI 1.04, 5.88) and aOR = 3.15 (95% CI 1.06, 9.31), respectively. Conclusions Higher rate of placental maternal malperfusion lesions, chronic villitis, and more neonatal hypoglycemia characterize SGA neonates with AC <10th percentile, pointing to the importance of AC measurement as an indicator for placental insufficiency.
THE IMPACT OF ABILITY TO CHANNEL FUNDS AND NON-PERFORMING LOAN ON PROFITABILITY OF LISTED BANKS ON INDONESIA STOCK EXCHANGE

Banks are established to distribute funds to society that needs them. By doing it effectively, banks are expected to be able to generate the amount of profits. This funding activity, indeed, has its risk. The risk intended is uncollectible funds from borrowers. This study intends to test and analyze the impact of ability of bank to channel funds and non-performing loans on bank profitability. Population used in this study comes from listed banks on Indonesia Stock Exchange. Banks as sample are taken from population by using simple random sampling method. Regression model with pooled data is utilized as data analysis method. Based on the test result of proposed hypotheses, this study concludes that ability to channel funds has a positive impact on bank profitability. On the other hand, non-performing loan has a negative impact on bank profitability.