Miracle-dz/UniFAR-FTUs huggingface dataset:
Two LTR retrotransposon elements within the abscisic acid gene cluster in Botrytis cinerea B05.10, but not in SAS56

The plant hormone abscisic acid has huge economic potential and can be applied in agriculture and forestry for it is considered to be involved in plant resistance to stresses such as cold, heat, salinity, drought, pathogens and wounding. Now overproducing strains of Botrytis cinerea are used for biotechnological production of abscisic acid. An LTR retrotransposon, Boty-aba, and a solo LTR were identified by in silico genomic sequence analysis, and both were detected within the abscisic acid gene cluster in B. cinerea B05.10, but not in B. cinerea SAS56. Boty-aba contains a pair of LTRs and two internal genes. The LTRs and the first gene have features characteristic of Ty3/gypsy LTR retrotransposons. The second gene is a novel gene, named brtn, which encodes for a protein (named BRTN) without putative conserved domains. The impressive divergence in structure of the abscisic acid gene clusters putatively gives new clues to investigate the divergence in the abscisic acid production yields of different B. cinerea strains.
Differences in Sense of Belonging, Pride, and Mental Health in the Daegu Metropolitan Region due to COVID-19: Comparison between the Presence and Absence of National Disaster Relief Fund

Korea’s Daegu Metropolitan City once had the second highest rate of COVID-19 infection after Wuhan in China. Following the outbreak, the government provided the first national disaster relief fund to citizens as financial aid. This study investigated whether the sense of regional belonging, pride, and mental health among 550 citizens of Daegu differed between the times before and after COVID-19, based on the presence or absence of the disaster relief fund. Frequency analysis, descriptive statistical analysis, and t-tests were conducted using the SPSS 25.0 program. Results showed that the sense of belonging was higher after COVID-19 than before, while pride was lower. Individuals who received the disaster relief fund showed higher levels of regional belonging and pride with statistical significance. The prevalence of melancholy and depression increased after COVID-19, but the presence or absence of the fund did not lead to a significant difference. Thus, in case of a future national disaster level, provision of the disaster relief fund can raise the sense of regional belonging and pride, in order to elicit communication among local residents toward overcoming difficulties. Furthermore, during challenging disaster situations, central and local governments should provide diverse programs for the citizens’ mental health care.
Correlates and Timing of Reproductive Aging Transitions in a Global Cohort of Midlife Women With Human Immunodeficiency Virus: Insights From the REPRIEVE Trial.

BACKGROUND Reproductive aging may contribute to cardiometabolic comorbid conditions. We integrated data on gynecologic history with levels of an ovarian reserve marker (anti-müllerian hormone [AMH)] to interrogate reproductive aging patterns and associated factors among a subset of cisgender women with human immunodeficiency virus (WWH) enrolled in the REPRIEVE trial. METHODS A total of 1449 WWH were classified as premenopausal (n = 482) (menses within 12 months; AMH level ≥20 pg/mL; group 1), premenopausal with reduced ovarian reserve (n = 224) (menses within 12 months; AMH <20 pg/mL; group 2), or postmenopausal (n = 743) (no menses within12 months; AMH <20 pg/mL; group 3). Proportional odds models, adjusted for chronologic age, were used to investigate associations of cardiometabolic and demographic parameters with reproductive aging milestones (AMH <20 pg/mL or >12 months of amenorrhea). Excluding WWH with surgical menopause, age at final menstrual period was summarized for postmenopausal WWH (group 3) and estimated among all WWH (groups 1-3) using an accelerated failure-time model. RESULTS Cardiometabolic and demographic parameters associated with advanced reproductive age (controlling for chronologic age) included waist circumference (>88 vs ≤88 cm) (odds ratio [OR], 1.38; 95% confidence interval, 1.06-1.80; P = .02), hemoglobin (≥12 vs <12 g/dL) (2.32; 1.71-3.14; P < .01), and region of residence (sub-Saharan Africa [1.50; 1.07-2.11; P = .02] and Latin America and the Caribbean [1.59; 1.08-2.33; P = .02], as compared with World Health Organization Global Burden of Disease high-income regions). The median age (Q1, Q3) at the final menstrual period was 48 (45, 51) years when described among postmenopausal WWH, and either 49 (46, 52) or 50 (47, 53) years when estimated among all WWH, depending on censoring strategy. CONCLUSIONS Among WWH in the REPRIEVE trial, more advanced reproductive age is associated with metabolic dysregulation and region of residence. Additional research on age at menopause among WWH is needed. CLINICAL TRIALS REGISTRATION NCT0234429.
Phylogenetic relationships of Ponto‐Caspian gobies and their relationship to the Atlantic—Mediterranean Gobiinae

A phylogenetic analysis for five Ponto-Caspian goby species belonging to the two genera Neogobius and Proterorhinus assigned to the sub-family Gobionellinae was conducted, with five Atlantic—Mediterranean species of sub-family Gobiinae, genera Gobius and Zosterisessor, as outgroup taxa. One hundred and two characters (37 continuous cranial osteological, 50 continuous external morphological, five discrete external morphological, four karyological, two vertebral and four external discrete qualitative characters) were studied. Parsimony analysis revealed that the two zoogeographically distinct groups of goby species comprise distinct phyletic lineages that are sister groups. The relation of neogobiids to the sub-family Gobiinae was reconsidered, due to the sharing of the same state for the diagnostic character. The recently proposed classification for the genera Proterorhinus and Zosterisessor was rejected. The status of several of the lower ranked taxa was also considered [e.g. Gobius bucchichi as a member of the genus Zosterisessor and the sub-generic status of Neogobius (Neogobius) fluviatilis and Neogobius (Apollonia) melanostomus]. The paleohistorical data suggest that those lineages, which may both descend from pre-Oligocene Indo-Pacific ancestors, separated at least 12 million years ago, during the early Miocene, after the formation of the Paratethys Sea, and then evolved independently. The Tethyan gobiine species evolved in the marine environment of the Mediterranean Sea and the Atlantic Ocean. The Ponto-Caspian (i.e. Paratethyan) gobies of the genera Neogobiusa and Proterorhinus diverged in the late Miocene or early Pliocene. They probably evolved in the freshwater refuge in the Daccian Basin of the Paratethys Sea (the recent Black Sea basin).
Therapy with Cardiomyocytes Derived from Pluripotent Cells in Chronic Chagasic Cardiomyopathy

Chagas disease discovered more than a century ago remains an incurable disease. The objective of this work was to investigate the therapeutic potential of cardiomyocytes derived from mouse embryonic stem cells (CM-mESC) in a model of chronic Chagasic cardiomyopathy (CCC). Mouse embryonic stem cells (mESC) were characterized, transduced with luciferase, and submitted to cardiac differentiation. CM-mESC were labeled with superparamagnetic iron oxide particles. To induce CCC, mice were infected with Brazil strain trypomastigotes. At 150 days post-infection (dpi), infected animals were treated with CM-mESC or PBS. Cells were detected by magnetic resonance imaging (MRI) and bioluminescence. Cardiac function was evaluated by MRI and electrocardiogram at 150 and 196 dpi. CCC mice showed significant differences in MRI and ECG parameters compared to non-infected mice. However, no differences were observed in contractile and electrical parameters between cell and PBS injected groups, 45 days after cell transplantation. Cells were detected 24 h after transplantation by MRI. CM-mESC bioluminescence tracking demonstrated over 90% decrease in signal 8 days after treatment. Nevertheless, the Infected + CM-mESC group showed a significant reduction in the percentage of collagen fibers when compared to the Infected + PBS group. In conclusion, CM-mESC therapy was not effective in reversing cardiac functional changes induced by Chagas disease despite some improvement in myocardial fibrosis.
Prey selection and diets of bluegill Lepomis macrochirus with differing population characteristics in two Nebraska natural lakes

Environmental prey samples and stomach contents of bluegill Lepomis macrochirus (Rafinesque) were collected in spring and summer 2000 from two Nebraska Sandhill lakes. Watts Lake contained a low-density bluegill population, whereas Cozad Lake contained a high-density bluegill population. Bluegill diets from both lakes were compared to determine if bluegill prey preference differed between the two populations. The highest median per cent (by calories) of zooplankton in the diet was 1.3%; the remainder was macroinvertebrates. Watts Lake bluegills preferred (based on Manly's alpha) amphipods in spring and chironomids in summer. Cozad Lake bluegills did not show a strong preference (compared with Watts Lake) for any macroinvertebrates, but still utilized amphipods and chironomids during both seasons. Larger bluegills in Watts Lake preferred chironomids in summer, but Cozad Lake bluegills did not exhibit this relationship. The higher density Cozad Lake bluegill population appeared to be more opportunistic than the lower density Watts Lake population, but both preferred macroinvertebrates.
Patients' views on end-of-life practices that hasten death: a qualitative study exploring ethical distinctions.

BACKGROUND Assisted dying (AD) is currently of wide interest due to legislative change. Its relationship to other end-of-life practices such as palliative sedation (PS) is the subject of ongoing debate. The aim of this article is to describe the perspectives of a group of New Zealanders with life-limiting illness, who want or would consider AD, on the provision of end of life services, including assisted death, withdrawal of lifeprolonging treatment and symptom management with opioids or PS. METHODS We recruited 14 people with life-limiting illness and life expectancy of less than a year. Their mean age was 61 (range, 34-82) years and half were enrolled in Hospice. An additional six family members were also interviewed and included in analysis. We asked them about why they would consider AD if it was available. Interview transcripts were inductively analyzed consistent with thematic analysis. We compared the findings to prevailing ethical frameworks. RESULTS Most of the participants viewed current palliative care practices, such as pain relief with opioids and symptom management with PS, as hastening death, in contrast to some medical research which concludes that proportional therapeutic doses do not hasten death. Some participants did not agree with the 'doctrine of double effect' ('DDE') and saw such practices as 'slow euthanasia' and 'covert euthanasia'. They implied such practices were performed without patient consent, though they did not conceive of this as murder. Participants asserted that active and passive practices for ending life were morally equivalent, and preferred to choose the time of death over other legal means for death. CONCLUSIONS This article contributes to what is known about how patients perceive end-of-life practices that potentially hasten death. There is a divide in what medical ethics and most health professionals and what some patients consider active hastening death. Participants' perspective was consistent with a consequentialist framework whereas deontology often guides medical ethics at the end of life. Participants' challenge to the interpretation of legal end-of-life practices as AD represents an epistemic contest to the foundation of medical knowledge, authority and ethics and therefore carries implications for preferences in care, communication and palliative care practice.
Age estimates and description of rhodoliths from Esperance Bay, Western Australia

Rhodoliths were collected in Esperance Bay,Western Australia, using a Van Veen grab from a bed that covered an area approximately 2.2 km2, in depths of 38 ±1 m. Rhodolith abundance (biomass per 0.1 m3), mean size (maximum diameter), and morphotypes were compared among the inshore margin, offshore margin, and middle area of the bed. Accelerator Mass Spectrometry was used to estimate ages of five free-living rhodoliths. Rhodolith taxa included Hydrolithon munitum, Lithothamnion sp. , an unidentified Melobesiodeae (a Mesophyllum or Synarthrophyton) and possibly a species of Sporolithon, with lumpy, warty, and fruticose morphologies. The middle area of the bed had significantly greater abundance of rhodoliths than either margin. Biomass of warty rhodoliths was greater in the middle area of the bed whereas fruticose and lumpy rhodoliths had similar biomass across the bed. The <20 mm size-class was the most abundant and these rhodoliths may originate from fragmentation of larger individuals. Radiocarbon age estimates ranged between calibrated ages of AD1050 and modern, indicating that a proportion of living rhodoliths consisted of fossil rhodoliths that had been recolonized. The combination of coastal morphology, gently-sloping sea-floor, hydrodynamics, and rhodolith morphology was representative of rhodolith beds found elsewhere in the world.
Design of Modified SIW H-Plane Horn Antenna for Ku-Band Applications

In today’s era of communication, Substrate Integrated Waveguide (SIW) is major part of development in Microwave and millimeter wave frequency range applications. In this paper, a novel design of H-plane SIW horn antenna is proposed for Ku-Band applications such as landing systems of an Aircraft radar, fixed satellite broadcast services etc., The proposed design of antenna is focused on producing improved bandwidth with variations in the tapered sections of the horn with respect to the conventional H-plane SIW horn antenna design. The design is simulated using the Keysight EMPro© 3D EM Simulation Software using FEM computational technique. Simulation results are analyzed, plotted and tabulated for various antenna parameters and are comparatively studied for conventional and modified structure respectively.
Targeted Degradation of PSEUDO-RESPONSE REGULATOR5 by an SCF ZTL Complex Regulates Clock Function and

Circadian clocks comprise several regulatory feedback loops that control gene transcription. However, recent evidence has shown that posttranslational mechanisms are also required for clock function. In Arabidopsis thaliana, members of the PSEUDO-RESPONSE REGULATOR (PRR) family were proposed to be components of the central oscillator. Using a PRR5specific antibody, we characterized changes in PRR5 protein levels in relation to its mRNA levels under various circadian conditions. Under long-day conditions, PRR5 mRNA levels are undetectable at dusk but PRR5 protein levels remain maximal. Upon dark transition, however, PRR5 levels decrease rapidly, indicating dark-induced, posttranslational regulation. We demonstrated that the Pseudo-Receiver (PR) domain of PRR5 interacts directly with the F box protein ZEITLUPE (ZTL) in vitro and in vivo. Analyses of mutants and transgenic plants revealed an inverse correlation between PRR5 and ZTL levels, which depends on the PR domain. These results indicate that PRR5 is negatively regulated by ZTL, which likely mediates its ubiquitination and degradation. Phenotypic analyses of prr5 ztl double mutants showed that PRR5 is required for ZTL functions.ZTLcontainsaLight-Oxygen-Voltagedomain,anditsactivitymaybedirectlyregulatedbybluelight.Consistentwith this notion, we found that blue light stabilizes PRR5, although it does not alter ZTL levels. Together, our results show that ZTL targets PRR5 for degradation by 26S proteasomes in the circadian clock and in early photomorphogenesis.
Evolutionary Techniques for EM Device synthesis

This paper demonstrates the use of evolutionary methods for synthesis of antenna. Microstrip line fed rectangular microstrip antenna for WLAN band is the example antenna. Analysis of the synthesized antenna for 5.9 GHz uses CST microwave studio for simulation and compares its result with measurement on a prototype. A comparison of genetic algorithm (GA) based synthesis with that of differential evolution (DE) indicates the later as a better choice.
Hybrid Feed Horn for S-band Application

The paper presents an optimized design procedure of a hybrid feed horn for the reflector antennas in communication applications at S-band. All design parameter for hybrid feed horn was studied extensively in detail and a theoretical, as well as mathematical explanation for same, has been proposed. The design procedure presented is in a generalized form to have a basic fundamental starting and further, the designer can generate an algorithm of his own depending on the preferred application. The boundary conditions to a well-designed geometry surface allow TE and TM modes of corresponding order to propagate at the same velocity over a frequency in the hybrid form. Mode conversion is required to generate hybrid modes and design parameters for the variable depth slot, ring loaded depth slot, and variable pitch to width slot mode converter is presented here in detail. As an example, the design of a ring loaded slot depth mode converter following a linear profile is presented. The proposed work is focused on S-band application for its excellent radiation penetration. The Concern in S-band passive elements of size miniaturization has been addressed in the given example. The simulated results manifest low return loss and radiation patterns with good beam symmetry, gain, and low cross-polarization.
On the Continuous Processing of Health Data in Edge-Fog-Cloud Computing by Using Micro/Nanoservice Composition

The edge, the fog, the cloud, and even the end-user’s devices play a key role in the management of the health sensitive content/data lifecycle. However, the creation and management of solutions including multiple applications executed by multiple users in multiple environments (edge, the fog, and the cloud) to process multiple health repositories that, at the same time, fulfilling non-functional requirements (NFRs) represents a complex challenge for health care organizations. This paper presents the design, development, and implementation of an architectural model to create, on-demand, edge-fog-cloud processing structures to continuously handle big health data and, at the same time, to execute services for fulfilling NFRs. In this model, constructive and modular $blocks$ , implemented as microservices and nanoservices, are recursively interconnected to create edge-fog-cloud processing structures as infrastructure-agnostic services. Continuity schemes create dataflows through the blocks of edge-fog-cloud structures and enforce, in an implicit manner, the fulfillment of NFRs for data arriving and departing to/from each block of each edge-fog-cloud structure. To show the feasibility of this model, a prototype was built using this model, which was evaluated in a case study based on the processing of health data for supporting critical decision-making procedures in remote patient monitoring. This study considered scenarios where end-users and medical staff received insights discovered when processing electrocardiograms (ECGs) produced by sensors in wireless IoT devices as well as where physicians received patient records (spirometry studies, ECGs and tomography images) and warnings raised when online analyzing and identifying anomalies in the analyzed ECG data. A scenario where organizations manage multiple simultaneous each edge-fog-cloud structure for processing of health data and contents delivered to internal and external staff was also studied. The evaluation of these scenarios showed the feasibility of applying this model to the building of solutions interconnecting multiple services/applications managing big health data through different environments.
Research of Neural Network Architectures for Solving Adaptive Routing Problems in Multiprovider Networks of Distributed Data Centers

Solving the adaptive routing problem in multiprovider networks of distributed data centers (DC) is a rather difficult task. The computational process of constructing routing tables is complicated with an increase in the load on network equipment and the need for its constant updating. The presence of several communication providers in the DC, the growth of user requests for various types of traffic also affect the choice of network construction option. The aim of this work is to implement the adaptive routing algorithm in multiprovider DC networks using a neural network theory. In the work a comparative analysis and experimental research of various architectures of neural networks were carried out and a model was developed that allows to find the optimal route in multiprovider DC networks with the highest accuracy.
Monitoring of Organs Using the Internet of Things

The presented system enables scalable and cost effective monitoring of pipe organs using the Internet of Things to ensure that they are operated within the required internal and environmental conditions. The purpose is to protect valuable cultural heritage and provide near real-time information about the use of pipe organs. A consideration of power consumption for a long-term battery operation is included.
Screening of ectoparasites from domesticated dogs for bacterial pathogens in Vientiane, Lao PDR

Arthropod‐borne diseases are widespread worldwide and are a complex interaction between animals, humans and ectoparasites. The understanding of the diversity and epidemiology of organisms transmitted by arthropod vectors, and the role of hosts and vectors in transmission of infections remain limited in Lao PDR. What knowledge does exist is primarily focused on more rural regions of the country. This study screened ectoparasites from domestic dogs in Vientiane city for the presence of bacterial pathogens of zoonotic importance. A total of 3,511 arthropod vectors were collected from 112 dogs. Vectors collected were Rhipicephalus sanguineus ticks, Ctenocephalides felis felis and Ctenocephalides felis orientis fleas and Heterodoxus spiniger lice. A sub‐sample of vectors from each dog was analysed by PCR to identify the potential bacteria. From 129 vector pools, Rickettsia spp. was detected in 6.7% (7/105) pools of ticks, 86.4% (19/22) pools of fleas and both pools of lice. Sequencing analysis confirmed Rickettsia felis in 13 flea pools and one louse pool and Rickettsia asembonensis in six flea pools. Anaplasmataceae was identified in 14.3% (15/105) tick pools and 100% (22/22) flea pools. Sequencing revealed the presence of Anaplasma platys in ticks and Wolbachia pipientis in fleas. Leptospira spp. was detected in one tick and one louse pool, and Brucella spp. was detected in 12.4% (13/105) tick pools. All samples were negative for Bartonella spp. , Coxiella burnetii and Borrelia burgdorferi. This is the first study providing evidence of R. asembonensis in fleas in Laos. Results from this study show arthropods are potential vectors to transmit zoonotic infection in Vientiane city, suggesting humans are at risk of zoonotic infections in the city.