Miracle-dz/UniFAR-FTUs huggingface dataset:
Optoelectronic integration for reduced power dissipation in optical interconnect

Increasing data interconnect densities and rates drive the requirements for optical high-speed interfaces to ASICs (e.g. network switches, routers, CPU's). In contemporary implementations, as illustrated in Figure 1a, optical transceivers (such as SFP and QSFP modules and AOCs) are located at the card edge. In such an architecture increasing data rates aggravate electrical signal integrity issues due to reflections at optical connectors and losses (dielectric and skin-effect) in the relatively long traces on the card PCBA connecting the electrical pads of the switch chip with the fingers of the transceiver module. To overcome those challenges, advanced (power hungry) electrical I/Os (re-timers, equalizers,) on the ASIC and the optical transceivers are required. Also advanced (costly) PCB materials may be needed. An approach to reduce those signal integrity problems is to reduce the distance between the optical transceivers and the ASIC by moving the transceivers from the board edge to the inside of the shelf as illustrated in Figure 1b. Here the optical signals are routed to the front panel by means of optical fibers. As an additional benefit, embedding the transceivers in the card may increase the achievable density at the card edge. However, it also adds more stringent reliability and thermal management requirements for the optical transceivers. An example is the IBM Power 775 System where transceivers are located around a HUB ASIC [1]. The most ideal solution has the ASIC and the optical transceivers integrated or co-packaged as shown in Figure.2c. This approach virtually eliminates the signal integrity challenges and enables the highest interconnect density.
Retrospective analysis of cohort risk factors and feeding phase timing associated with noninfectious heart disease deaths in U.S. feedlot cattle

Abstract Heart disease, specifically congestive heart failure, has become of increased interest to geneticists and cattle feeders. Data on cohort associations of risk factors related to heart disease and when heart disease deaths occur in U.S. feedlot cattle are limited. The study objectives were to 1) determine potential associations between feedlot cohort demographics and the risk of at least one noninfectious heart disease (NIHD) death occurrence and 2) determine potential association between feedlot cohort demographics and the timing of NIHD deaths during the feeding phase. Data were downloaded from commercial feedyard software and analyzed by constructing a generalized linear mixed model for both analyses. A binomial and Gaussian distributions for risk of NIHD death and timing of NIHD were utilized as link functions for their respective models. Our study population consisted of 28,950 cohorts (representing 4,596,205 cattle) that were placed in 22 U.S. commercial feedlots from January 01, 2016, to January 01, 2019. There were 3,282 cases of NIHD deaths from a population of 75,963 cattle that died during the 3-yr study period. Average cohort arrival weight’s effect on NIHD probability was influenced by arrival quarter and arrival year of placement (P < 0.01). Cohorts with steers were associated with a greater probability of at least one NIHD death (2.38%) compared with heifers (1.95%; P < 0.01). Increasing cohort size was associated with an increased probability of a cohort having at least one NIHD death (P < 0.01). The probability of a cohort having at least one NIHD death increased with increasing DOF categories from 1.51% in cattle fed 100 to 175 d, to 2.12% in cattle fed 176 to 250 d, and 2.87% for cattle fed 251 to 326 d. Cattle > 326 DOF were no different in the probability of a NIHD death compared with the other feeding categories. Timing of a NIHD death had a mean and median occurrence of 110 DOF with an interquartile range of 64 to 153 DOF. The effect of arrival weight on days at death was influenced by year placed with heavier cattle generally decreasing the model adjusted means of DOF at NIHD death. Arrival quarter was influenced by year placed on model adjusted means on the timing of a NIHD death. Steers with NIHD died later compared with heifers (P < 0.01) diagnosed with NIHD. In conclusion, multiple factors are associated with the probability and timing of a NIHD death. Probability of having at least one NIHD death within a cohort was low, and half of the deaths occurred before 110 DOF.
Reliability of fuzes based on diode laser assemblies

We present an analysis of a reliability assessment tailored specifically to fuzes based on laser diode assemblies. Fuzes are required to deliver high energy in a single short pulse (micro- to milliseconds) after prolonged storage (tens of years) in thermally non-stabilized environments. The temperature variation could easily exceed 100 degrees, and the transition from one extreme to the other could be slow or rapid, depending on a particular application. The operating requirements for diode laser fuzes are dramatically different from the majority of other diode laser applications and thus a reliability assurance program for laser fuzes should reflect these differences in usage. In this paper we demonstrate that it is possible to build accelerated aging conditions based on thermal cycling. As parameters in the accelerated thermal aging, we used the total temperature difference between the lowest and the highest points in the cycle, and the average rate of temperature change between the extreme points. This accelerated aging technique based on thermal cycling can predict the performance deterioration over time after storage in thermally non-stabilized environments. The basis of this approach can be extended to the analysis of reliability in environments with high vibration and radiation levels.
Based on Network Pharmacology to Explore the Molecular Mechanism of Buzhong Yiqi Decoction for the Treatment of Gastric Cancer

BackgroundBuzhong Yiqi Decoction (BZYQD) has been widely accepted as an alternative treatment for gastric cancer (GC) in China. The present study set out to determine the potential molecular mechanism of BZYQD in the treatment of GC by means of network pharmacology, molecular docking, and molecular dynamics simulation.MethodsThe potential active ingredients and targets of BZYQD were screened out through the Traditional Chinese Medicine Systems Pharmacology (TCMSP). GC-related targets were screened out through the GeneCards database, and the intersection targets of BZYQD and GC were obtained by using the Venn diagram online tool. Then, the TCM-Active Ingredient-Target network was constructed by using the Cytoscape, and the protein-protein interaction (PPI) network was constructed by using the STRING database. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses of the effective targets of BZYQD in GC were performed through the Metascape platform. Finally, the molecular docking between the compounds and the target proteins was performed by using the AutoDock Vina software. The simulation of molecular dynamics was conducted for the optimal protein-ligand complex obtained by molecular docking using the Amber18 software.ResultsA total of 150 active ingredients of BZYQD were retrieved, corresponding to 136 targets of GC. The key active ingredients were quercetin, kaempferol, nobiletin, naringenin, and formononetin. The core targets were AKT1, STAT3, TP53, MAPK1, and MAPK3. GO functional enrichment analysis showed that BZYQD treated GC by affecting various biological processes such as oxidative stress, chemical stress, lipopolysaccharide reaction, and apoptosis. KEGG pathway enrichment analysis indicated that the apoptosis signaling pathway, PI3K/Akt signaling pathway, proteoglycan in cancer, IL-17 signaling pathway, TNF signaling pathway, and HIF-1 signaling pathway were involved. Molecular docking results revealed the highest binding energy for MAPK3 and naringenin. The stable binding of MAPK3 and naringenin was also demonstrated in the molecular dynamics simulation test, with the binding free energy of -25kcal/mol.ConclusionThis study preliminarily revealed the multi-component, multi-target, and multi-pathway characteristics of BZYQD against GC, laying a scientific basis for further research on the molecular mechanism of BZYQD.
Matching the input impedance of a broadband disc monopole

The Letter deals with the analysis of a disc monopole with the method of moments (MOM) procedure using triangular cells. An accurate annular ring of magnetic currents models the feeding connector. This technique avoids the introduction of an attachment mode at the antenna-to-SMA connector junction. This method gives the theoretical input impedance of a disc monopole within a wide frequency band. Measurements and theory are in good agreement.
Seed Quality and Protein Classification of Some Quinoa Varieties

Quinoa plants, originating from the Andean mountains in South America, have a large scale of biological diversity. Along with the cultivation favorableness of quinoa, it reveals superior nutrition aspects. In comparison with cereal crops, like rice, maize, and wheat, quinoa seeds contain valuable quantities of protein of remarkable quality. The current study compared four quinoa cultivars from different origins in terms of protein composition and germinability. In addition, this study focused on the effect of different geographical cultivation areas on the protein composition of wild Egyptian quinoa seeds and three other cultivars that vary in their cultivation origins. Significant differences were observed among the quinoa varieties in the germination percentage (GP), shoot length (SL), and root length (RL). Using the technology of Near-InfraRed Spectroscopy, the highest protein value was recorded for the American variety (18.39%), followed by the Wild Egyptian variety (17.16%). The aromatic phenylalanine recorded the highest concentration of the essential amino acid bulk. The Rainbow variety contained 12.7 g-aa/kg protein, followed by the wild Egyptian variety with 4.9 g-aa/kg protein. In turn, glutamic was the most abundant amino acid of the non-essential amino acids, with 10.1, 4, 23.4, and 4 (g-aa/kg protein) for quinoa varieties, Wild Egyptian, American, Rainbow, Black, respectively. SDS-PAGE was used to identify the allelic variations in the seed storage protein profiles among the studied quinoa varieties. The studied quinoa varieties showed 23.81% of the polymorphism in the protein bands, with the mean band frequency of 0.881. The resulting protein bands fluctuated in the range between 115.02 and 16 kDa. With a similarity percentage (90%), Wild Egyptian and the Rainbow quinoa varieties can be classified in one clade.
Transcriptome-Wide Analysis of Human Liver Reveals Age-Related Differences in the Expression of Select Functional Gene Clusters and Evidence for a PPP1R10-Governed ‘Aging Cascade’

A transcriptome-wide analysis of human liver for demonstrating differences between young and old humans has not yet been performed. However, identifying major age-related alterations in hepatic gene expression may pinpoint ontogenetic shifts with important hepatic and systemic consequences, provide novel pharmacogenetic information, offer clues to efficiently counteract symptoms of old age, and improve the overarching understanding of individual decline. Next-generation sequencing (NGS) data analyzed by the Mann–Whitney nonparametric test and Ensemble Feature Selection (EFS) bioinformatics identified 44 transcripts among 60,617 total and 19,986 protein-encoding transcripts that significantly (p = 0.0003 to 0.0464) and strikingly (EFS score > 0.3:16 transcripts; EFS score > 0.2:28 transcripts) differ between young and old livers. Most of these age-related transcripts were assigned to the categories ‘regulome’, ‘inflammaging’, ‘regeneration’, and ‘pharmacogenes’. NGS results were confirmed by quantitative real-time polymerase chain reaction. Our results have important implications for the areas of ontogeny/aging and the age-dependent increase in major liver diseases. Finally, we present a broadly substantiated and testable hypothesis on a genetically governed ‘aging cascade’, wherein PPP1R10 acts as a putative ontogenetic master regulator, prominently flanked by IGFALS and DUSP1. This transcriptome-wide analysis of human liver offers potential clues towards developing safer and improved therapeutic interventions against major liver diseases and increased insights into key mechanisms underlying aging.
UWB bandpass filters using short‐circuited shunt stub‐embedded multiple‐mode resonators

An ultra‐wideband (UWB) bandpass filter with good out‐of‐band rejection is presented in this work. As a starting part of designing UWB filter, a shunt short‐circuited stub is introduced at the center of a half‐wavelength resonator and it can generate two transmission zeros near the lower and upper cutoff frequencies. With the use of even‐ and odd‐mode approach, this initial multiple‐mode resonator is characterized and designed to build up a bandpass filter with good UWB passband and highly attenuated out‐of‐band skirt. Next, a coupled‐line section with cross‐coupling property is formed in this short‐circuited stub so as to widen the concerned upper‐stopband due to excitation of two more transmission zeros. Finally, a UWB bandpass filter prototype is fabricated to experimentally validate the attractive in‐band and out‐of‐band performances as predicted in theory. © 2009 Wiley Periodicals, Inc. Microwave Opt Technol Lett 51: 2556–2559, 2009; Published online in Wiley InterScience (www.interscience.wiley.com). DOI 10.1002/mop.24687
Rapid and Sensitive Detection of Water Toxicity Based on Photosynthetic Inhibition Effect

To achieve rapid and sensitive detection of the toxicity of pollutants in the aquatic environment, a photosynthetic inhibition method with microalgae as the test organism and photosynthetic fluorescence parameters as the test endpoint was proposed. In this study, eight environmental pollutants were selected to act on the tested organism, Chlorella pyrenoidosa, including herbicides (diuron, atrazine), fungicides (fuberidazole), organic chemical raw materials (phenanthrene, phenol, p-benzoquinone), disinfectants (trichloroacetonitrile uric acid), and disinfection by-products (trichloroacetonitrile). The results showed that, in addition to specific PSII inhibitors (diuretic and atrazine), other types of pollutants could also quickly affect the photosynthetic system. The photosynthetic fluorescence parameters (Fv/Fm, Yield, α, and rP) could be used to detect the effects of pollutants on the photosynthetic system. Although the decay rate of the photosynthetic fluorescence parameters corresponding to the different pollutants was different, 1 h could be used as an appropriate toxicity exposure time. Moreover, the lowest respondent concentrations of photosynthetic fluorescence parameters to diuron, atrazine, fuberidazole, phenanthrene, P-benzoquinone, phenol, trichloroacetonitrile uric acid, and trichloroacetonitrile were 2 μg·L−1, 5 μg·L−1, 0.05 mg·L−1, 2 μg·L−1, 1.0 mg·L−1, 0.4 g·L−1, 0.1 mg·L−1, and 2.0 mg·L−1, respectively. Finally, diuron, atrazine, fuberidazole, and phenanthrene were selected for a comparison of their photosynthetic inhibition and growth inhibition. The results suggested that photosynthetic inhibition could overcome the time dependence of growth inhibition and shorten the toxic exposure time from more than 24 h to less than 1 h, or even a few minutes, while, the sensitivity of the toxicity test was not weakened. This study indicates that the photosynthetic inhibition method could be used for rapid detection of the toxicity of water pollutants and that algae fluorescence provides convenient access to toxicity data.
Efficient spatial-temporal chaotic mixing in microchannels

A chaotic micro mixer with multiple side channels is designed and investigated, in which fluid can be stirred by pumps through the side channels. By stretching and folding fluid in the main and side channels, chaotic mixing can be achieved. A simple mathematic model is derived to understand the movement of particles in the microchannel. Spatial trajectories of fluid particles are projected to Poincare sections by mapping. The route from the quasi-period to chaos is revealed to be destruction of KAM curves and shrinkage of the quasi-periodic areas. Lyapunov exponents (LE) are used as the mixing index and the criteria to evaluate the chaotic behavior of the system. We found that LE is closely related to the amplitude and frequency of stirring and can be used to optimize our design and operation. From the relationship of LE and striation thickness, the minimal mixing length required can be estimated, which is much shorter than that needed in passive mixer design.
The Toxic Effects of Ppz1 Overexpression Involve Nha1-Mediated Deregulation of K+ and H+ Homeostasis

The alteration of the fine-tuned balance of phospho/dephosphorylation reactions in the cell often results in functional disturbance. In the yeast Saccharomyces cerevisiae, the overexpression of Ser/Thr phosphatase Ppz1 drastically blocks cell proliferation, with a profound change in the transcriptomic and phosphoproteomic profiles. While the deleterious effect on growth likely derives from the alteration of multiple targets, the precise mechanisms are still obscure. Ppz1 is a negative effector of potassium influx. However, we show that the toxic effect of Ppz1 overexpression is unrelated to the Trk1/2 high-affinity potassium importers. Cells overexpressing Ppz1 exhibit decreased K+ content, increased cytosolic acidification, and fail to properly acidify the medium. These effects, as well as the growth defect, are counteracted by the deletion of NHA1 gene, which encodes a plasma membrane Na+, K+/H+ antiporter. The beneficial effect of a lack of Nha1 on the growth vanishes as the pH of the medium approaches neutrality, is not eliminated by the expression of two non-functional Nha1 variants (D145N or D177N), and is exacerbated by a hyperactive Nha1 version (S481A). All our results show that high levels of Ppz1 overactivate Nha1, leading to an excessive entry of H+ and efflux of K+, which is detrimental for growth.
Effect of Chemical Challenges on the Properties of Composite Resins

Objective To evaluate the chemical degradation effect on microhardness and roughness of composite resins after aging. Materials and Methods Specimens (n = 10) were used for Filtek Z350 XT (Z350), Filtek Bulk Fill (BULK), Micerium HRI (HRI), Micerium BIOFUNCION (BIO), and Vittra APS (VITTRA). Microhardness and roughness were performed before and after degradation with the followed solutions: citric acid, phosphoric acid, 75% alcohol, and distilled water. Samples were to a 180-day chemical cycling protocol. After degradation, one sample of each group was selected for scanning electron microscope evaluation. The data were analyzed with normal distribution (Kolmogorov–Smirnov) and similarities of variations for the Bartlett test. ANOVA (two-way) followed by Tukey's test was performed considering treatment and composite resin (P < 0.05). Results For microhardness and roughness, variations were noted to different solution and resin formulations. Z350 and HRI showed higher microhardness percentage loss, and it was more evident after storage in alcohol (−48.49 ± 20.16 and −25.02 ± 14.04, respectively) and citric acid (−65.05 ± 28.97 and 16.12 ± 8.35, respectively). For roughness, Z350 and VITTRA showed less delta values after alcohol storage (−0.047 ± 0.007 and −0.022 ± 0.009, respectively). HRI had the worst roughness for citric acid (−0.090 ± 0.025). All resins were not statistically different between each other in water and phosphoric acid. Conclusion The formulations of restorative resin materials influenced in degree of surface degradation after 180 days of chemical degradation. Water was considered the solution that causes less degradation for microhardness and roughness evaluations. For microhardness, alcohol was considered the worst solution for Z350 and HRI. For superficial roughness, Z350 and VITTRA showed less degradation in alcohol and citric and phosphoric acid solutions.
Cryogenic photonic local oscillator for 2mm band SIS heterodyne astronomical receiver array

A single photomixer generated the local oscillator signal for a four- element focal plane array of niobium superconducting heterodyne receivers operating at 4 K. The photomixer incorporated an InGaAsP photodiode, driven by two 1.55 µm laser beams, that operated at an ambient temperature of 77 K. Its output signal propagated through a stainless steel waveguide to the 4 K cryostat stage. Distribution of LO power to each superconducting junction was accomplished via 17 dB broadwall waveguide couplers. Double sideband noise temperatures of the array were 60±15 K across the 129–174 GHz local oscillator band.
Factors associated with brain white matter damage in type 2 diabetes mellitus: a tract-based spatial statistics study

Background The pathogenesis and related factors of central nervous system abnormality in patients with type 2 diabetes mellitus (T2DM) have always been the focus of clinical research. Purpose To compare and analyze the area of white matter (WM) damage in patients with T2DM based on their level of hemoglobin A1C (HBA1c) and discuss any related factors. Material and Methods Based on their levels of HBA1c, 87 patients with T2DM were divided into three groups (Group B, C, or D), of which 29 non-diabetic volunteers served as the control group (Group A). DTI data analysis was based on tract-based spatial statistics (TBSS). The obtained parameters were compared among each group and the relevant clinical factors were analyzed. Results For age, sex, mini-mental state examination (MMSE), and Montreal Cognitive Assessment (MoCA) scores, there were no statistically significant differences among groups. For fractional anisotropy (FA) and radial diffusivity (RD) of WM, there were statistically significant differences (P < 0.05, two-tailed, FWE corrected) in the local area of corpus callosum, corona radiate, superior longitudinal fasciculus, etc. Most of these were significantly correlated with body mass index (BMI), left systolic blood pressure (SBP_L), and β2 microglobulin. Conclusion Before the cognitive function was obviously impaired, abnormalities of FA and RD had been found in the corpus callosum, corona radiate, and upper fasciculus in patients with T2DM, which suggested that the damage mainly occurred in the myelin sheath of WM and may be related to systemic vascular damage.