Miracle-dz/UniFAR-FTUs huggingface dataset:
Poly (lactic-co-glycolic acid)/graphene oxide composites combined with electrical stimulation in wound healing: preparation and characterization

Purpose In this study, we fabricated multifunctional, electrically conductive composites by incorporating graphene oxide (GO) into a poly (lactic-co-glycolic acid) (PLGA) copolymer for wound repair. Furthermore, the resultant composites were coupled with electrical stimulation to further improve the therapeutic effect of wound repair. Methods We evaluated the surface morphology of the composites, as well as their physical properties, cytotoxicity, and antibacterial activity, along with the combined effects of composites and electrical stimulation (ES) in a rat model of wound healing. Results Application of the PLGA/GO composites to full-thickness wounds confirmed their advantageous biological properties, as evident from the observed improvements in wound-specific mechanical properties, biocompatibility, and antibacterial activity. Additionally, we found that the combination of composites and ES improved composite-mediated cell survival and accelerated wound healing in vivo by promoting neovascularization and the formation of type I collagen. Conclusion These results demonstrated that combined treatment with the PLGA/GO composite and ES promoted vascularization and epidermal remodeling and accelerated wound healing in rats, thereby suggesting the efficacy of PLGA/GO+ES for broad applications associated with wound repair.
Estimates of Genetic Parameters for Body Weight in Turkish Holstein Bulls using Random Regression Model

The objective of this study was to estimate genetic parameters for the body weights of Turkish Holstein bulls using the random regression model. The data set consists of 1475 body weight records from 395 Holstein bulls raised in the same herd. Body weight records of bulls aged between 32 and 725 days old were collected at approximately two-month intervals from December 2013 to October 2014. In the study body weight measurements made on the same day were accepted as a group and the bulls were grouped into 10 different groups according to their age. The additive genetic and permanent environmental effects were estimated using DFREML algorithm by third order Legendre polynomials. The additive genetic variance estimates ranged from 10.73 to 4867.07, the phenotypic variance estimates ranged from 382.84 to 5514.86 and permanent environmental variance estimates ranged from 0.33 to 63.27. The heritability values were estimated between 0.03 to 0.90. The phenotypic and additive genetic correlations between body weights were positively estimated between 0.085 to 0.89 and 0.53 to 0.94, respectively. It was concluded that use of body weight at an earlier age will give advantage in breeding studies for body weight at slaughter.
The versican-hyaluronan complex provides an essential extracellular matrix niche for Flk1+ precursors in vasculogenesis and primitive hematopoiesis

Extracellular matrix aggregates comprising the proteoglycan versican and glycosaminoglycan hyaluronan are necessary for cardiac development. Here we identify failure of primary vascular plexus formation and attenuation of primitive hematopoiesis in the yolk sac of the mouse insertional mutant Vcanhdf, which lacks all versican isoforms. Spatially co-regulated versican and hyaluronan were intimately associated with Flk1+ hematovascular progenitor cells migrating from the primitive streak into extraembryonic mesoderm, although not with the differentiated successors. In the absence of versican, yolk sac and embryo hyaluronan were severely depleted, suggesting that versican stabilizes extracellular hyaluronan. Vcan inactivation by CRISPR/Cas9 in mouse embryonic stem cells reduced expression of vascular endothelial and hematopoiesis markers in embryoid bodies, which formed fewer and shorter vascular sprouts in response to VEGF165 and fewer blood colonies. These findings, together with single-cell transcriptome data, suggest that versican-hyaluronan pericellular matrix provides a crucial niche for hematovascular progenitors immediately after their genesis at gastrulation.
A biological and ecological review of the endemic New Zealand genus Alseuosmia (toropapa; Alseuosmiaceae)

ABSTRACT We review the biology and ecology of the endemic New Zealand genus Alseuosmia A. Cunn. The taxonomy of the genus has a complicated history with considerable debate about both its relationship to other genera and the number of species recognised within it. Alseuosmia is now considered to belong to the small Southern Hemisphere family Alseuosmiaceae. Five species are currently accepted within Alseuosmia (A. macrophylla A. Cunn, A. turneri R. O. Gardner, A. pusilla Colenso, A. quercifolia A. Cunn and A. banksii A. Cunn). However, A. banksii is extremely morphologically variable and some forms that do not fit in to the existing taxonomy may warrant recognition at the species level. Unusual features of the genus include rayless wood and the apparent mimicry by some Alseuosmia species of unrelated plants.
Photo sensing and quorum sensing are integrated to control bacterial group behaviors

Pseudomonas aeruginosa transitions between the free-swimming state and the sessile biofilm mode during its pathogenic lifestyle. We show that quorum sensing represses P. aeruginosa biofilm formation and virulence by activating expression of genes encoding the KinB-AlgB two-component system. Phospho-AlgB represses biofilm and virulence genes, while KinB dephosphorylates, and thereby, inactivates AlgB. We discover that the photoreceptor BphP is the kinase that, in response to light, phosphorylates and activates AlgB. Indeed, exposing P. aeruginosa to light represses biofilm formation and virulence gene expression. To our knowledge, P. aeruginosa was not previously known to detect light. The KinB-AlgB-BphP module is present in all Pseudomonads, and we demonstrate that AlgB is the cognate response regulator for BphP in diverse bacterial phyla. We propose that KinB-AlgB-BphP constitutes a “three-component” system and AlgB is the node at which varied sensory information is integrated. This study sets the stage for light-mediated control of P. aeruginosa infectivity.
Does the Genetic Diversity of Macuilillo, Oreopanax xalapensis (Araliaceae), Change Along Successional Gradients of the Montane Cloud Forest?

Forest regeneration after human-induced or natural disturbances results in a sequential replacement of species, starting with colonizing of pioneer species that modifies the physical conditions of the environment, which later allows the establishment of mid- and late-successional species. Whether the forest succession implies a reduction of population size of tree species might be expected a less genetic diversity in populations inhabiting oldest succession stages. We aimed to study whether genetic diversity of Macuilillo, Oreopanax xalapensis (a understory tree), decreases in advanced age-classes and in late successional of montane cloud forest at Huitepec Ecological Reserve (Chiapas, Mexico). We counted individuals from three age classes: seedlings, saplings, and young reproductive individuals in nine plots along three successional stages (early-, middle-, and late-successional forests). Seven enzyme systems (SOD, AP, FUM, G6PDH, GOT, GPI, and G3PDH) were used to obtain common genetic diversity; Φ-statistics and a Bayesian model were used to infer population structure. At the early-successional stage, O. xalapensis had a bigger population size and significantly high numbers of seedlings. In general, among the successional stages, the genetic diversity of O. xalapensis was moderate to high (He = 0.25–0.46); the saplings presented the highest expected genetic diversity (He). Populations were genetically structured by age-classes but not by successional stages. The successional stages affected the demographic dynamics with a mild impact on the genetic structure across age-classes of O. xalapensis. The scenic and recreational conservation strategies implemented in this forest have effectively allowed for population development of O. xalapensis and provide some explanation of genetic diversity at early-succession stage.
The complete mitochondrial genome of Yao silkworm (Bombyx mori)

Abstract Here, we describe the first complete mitochondrial genome of Yao silkworm, a unique silkworm resource native at Guangxi, China. This circular molecule is 15,656 bp long and contains the typical set of 37 genes (13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNA genes) and one non-coding A + T-rich region of 494 bp long. The genome organization and gene arrangement are identical to those observed in all available Bombyx mori strains. The phylogenetic tree inferred from Bayesian inference provides a molecular evidence that Yao silkworm belongs to the domestic silkworm (B. mori), rather than a novel silkworm species.
African Salmonella Typhimurium sequence type 313 lineage 2 evades MAIT cell recognition by overexpressing RibB

Mucosal-associated invariant T (MAIT) cells are a subset of innate T lymphocytes activated by bacteria that produce vitamin B2 metabolites. Mouse models of infection have demonstrated a role for MAIT cells in antimicrobial defence. However, proposed protective roles of MAIT cells in human infections remain unproven and clinical conditions associated with a selective absence of MAIT cells have not been identified. We report that typhoidal and non-typhoidal S. enterica strains generally activate MAIT cells. However, African invasive disease-associated multidrug-resistant S. Typhimurium sequence type 313 lineage 2 strains escape MAIT cell recognition through overexpression of ribB, a bacterial gene that encodes the 4-dihydroxy-2-butanone 4-phosphate synthase enzyme of the riboflavin biosynthetic pathway. This MAIT cell-specific phenotype did not extend to other innate lymphocytes. We propose that ribB overexpression is an evolved trait that facilitates evasion from immune recognition by MAIT cells and contributes to the invasive pathogenesis of S. Typhimurium sequence type 313 lineage 2 in vivo.
Pollen Morphology of Indian Species of Saraca L. (Leguminosae)-A Threatened and Legendary Medicinal Tree

The genus Saraca L. (Leguminosae) is a universal panacea in herbal medicine. The present study investigates the comparative pollen morphology of four species of Saraca viz. S. asoca (Roxb.) de Wilde, S. declinata (Jack) Miq. , S. indica L. , and S. thaipingensis Cantley ex Prain growing in India to reveal differences of their pollen structures to aid taxonomic and evolutionary values. The detailed morphology and surface structure of pollen grains were studied and described using light microscopy and scanning electron microscopy. The pollen grains of Saraca showed isopolar, para-syncolporate, tricolporate, with radially symmetric, prolate and prolate-spheroidal structure. The surface of pollen of S. indica is rugulate with large lirae but in S. declinata, the surface is micro-rugulate to vermiculate with relatively thin lirae and that of S. thaipingensis is indistinct as the psilate surface with a frequent protuberance and fewer perforations were observed along with the gemmae like structure. Exine ornamentation helped to separate S. indica and S. asoca. Exine thickness varies from 3-4 μm. Presence of protuberance and exine thickness varies among individuals of the species spread over different locations. Present work also provides a unique palynological identity and interrelationship of these four species based on cluster analysis taking 23 pollen characters with the help of statistical method like the plotting of ternary graph. Ternary plots also helped to calculate the level of plasticity of each character in the intraand inter-specific level.
Abiotic and Biotic Factors Affecting Loblolly Pine Health in the Southeastern United States

Southern pine forests are important fiber and wood sources, and critical to local, regional, and national economies in the United States. Recently, certain areas of southern pine forests, especially those dominated by loblolly pine (Pinus taeda), have been reported to exhibit abnormally high levels of tree dieback and mortality. However, causal agents either have not been well defined or are controversial in their impacts on tree health. We assessed various abiotic (e.g., slope, aspect, soil characteristics) and biotic (e.g., tree species, stand characteristics, presence of root fungi) factors in 37 healthy (asymptomatic) and unhealthy (symptomatic) sites to elucidate specific factors affecting loblolly pine health in Alabama and Georgia. Soil nutrient content did not differ statistically between healthy and unhealthy sites, but manganese contents were slightly greater, and nitrogen and carbon contents were slightly lower in healthy sites. Unhealthy sites did have a higher silt content than did healthy sites. Pine stems and basal area were greater on unhealthy than on healthy sites, whereas opposite trends were observed for the incidence of stem cankers and mechanical damage. An increased incidence of the root fungal pathogen Heterobasidion irregulare, the causal agent of Heterobasidion root disease, was found on unhealthy sites, but incidence of Leptographium spp. did not differ between the two site types. Thus, soil attributes, stand structure, and management history seem to be the most critical factors affecting loblolly pine health, at least at the local level. Further, some of these factors may be improved through appropriate silvicultural techniques, emphasizing the importance of silviculture in maintaining pine health throughout the southern region.
Baobab Diversity, Seed Germination and Early Growth

The diversity in baobab was studied on 75 trees located at Adaklu District and Ho and Hohoe Municipalities. Thirteen morphological traits were used in the characterisation based on Bioversity descriptors for baobab. GenStat edition 12 was used to analyse the diversity as well as germination and growth data. Group average hierarchical clustering with Jaccard similarity coefficient discriminated among most of the baobab trees. Clustering was not based on location although few trees that were not discriminated were from the same communities. The clustering can be used in selecting trees for further studies and domestication. Germination tests were conducted with soaked, boiled and sulphuric acid treated seeds. Only the sulphuric acid treated seeds had germination significantly higher than the control. More studies should be done to find easier way of breaking seed dormancy of baobab. There were significant differences in 100 seed weight, seed length and thickness among seeds from three different trees. However, there were no significant difference in seed width of the same sample. Seed size traits should be considered in selecting baobab for domestication because of the high variability revealed. Observation on seedling growth revealed less than 10 leaves in the first month and increased to about 20 in the fourth month. Growth in girth was 5mm and 8mm in the first and fourth months respectively. Seedling height of 17cm in the first month reached 40cm in four months. Information from this research is valuable for further work on domestication of baobab.
Effective In-Class Support: The Management of Support Staff in Mainstream and Special Schools

Introduction: A history of support Aims of support Patterns of employment Support and training. Meeting Children's Needs: Supporting slow learners Supporting children with specific learning difficulties Supporting children with physical difficulties Supporting children with emotional and behavioural problems. Support in the Primary School: The role of the nursery nurse Working with classroom assistants The bilingual language assistant Parents in the classroom. Support at Secondary Level: The role of the support teacher Teaching in partnership Working with support assistants Developing a support timetable. Support in the Special School: The role of the special school assistant Therapy in the classroom Developing multidisciplinary teams Approaches to room management. Putting Support on the Agenda: Recruitment and selection Drawing up a job description Building effective
Modelling erythropoiesis in congenital dyserythropoietic anaemia type I (CDA-I)

We employ and extensively characterise an ex vivo culture system to study terminal erythroid maturation of CD34+ progenitors from the peripheral blood of normal individuals and patients with Congenital Dyserythropoietic Anaemia type 1 (CDA-I). Using morphological analysis, FACS analysis and the proteomic approach CyTOF, we analysed patient-derived erythroblasts stage-matched with those from healthy donors during the expansion phase and into early differentiation. In patient cells, aspects of disordered erythropoiesis manifest midway through differentiation, including increased proliferation and changes in the DNA accessibility profile. We also show that cultured erythroblasts from CDA-I patients recapitulate the pathognomic feature of this erythroid disorder with up to 40% of the cells having abnormal ‘spongy’ chromatin morphology by electron microscopy, as well as upregulation of GDF15, a marker of ineffective erythropoiesis. In the tertiary phase of culture, patient cells show significantly less enucleation and there is persistence of earlier erythroid precursors. Furthermore, the enucleation defect appears to be more severe in patients with mutations in C15orf41, as compared to the other known causative gene CDAN1, indicating a genotype/phenotype correlation in CDA-I. Such erythroblasts are a valuable resource for investigating the pathogenesis of this disease and provide the opportunity for streamlining diagnosis for CDA-I patients and ultimately other forms of unexplained anaemia.
Mechanistic studies on the absorption enhancement of a self-nanoemulsifying drug delivery system loaded with norisoboldine-phospholipid complex

Background Norisoboldine (NOR), the main isoquinoline alkaloid constituent in Radix Linderae, was demonstrated to have an outstanding anti-arthritis activity. However, a poor oral bioavailability of NOR creates a barrier for its development and application. Methods A new self-nanoemulsifying drug delivery system (SNEDDS) loaded with the phospholipid complex (PC) was designed to improve the oral bioavailability of NOR. NOR-PC was prepared by solvent evaporation method with a mixture of phospholipid and NOR at a mass ratio of 3:1. The property of PC is to improve the liposolubility of NOR, and made PC embedded in the drug delivery system. The physicochemical property of NOR-PC was characterized by differential scanning calorimetry (DSC) and Fourier transform infrared spectroscopy (FT-IR). According to the ability to dissolve NOR-PC, the oil and cosurfactant were chosen. The surfactant was selected based on its emulsification efficiency in SNEDDS. Pseudo-ternary phase diagram was created to select the best formulation of NOR-PC-SNEDDS, and the pharmacokinetic parameters were detected in rats. In addition, intestinal lymphatic transport and liver microsome experiment were studied to gain insight into the mechanism for NOR-PC-SNEDDS increasing the oral bioavailability of NOR. Results Solubility detection showed that the PC significantly improved the liposolubility of NOR. NOR-PC-SNEDDS was prepared using NOR-PC, Ethyl oleate, Labrasol, Cremophor EL and transcutol HP at a weight ratio of 1:2:3.36:2.24:2.4 (w/w/w/w/w). The particle size and zeta potential of NOR-PC-SNEDDS were 36.72±1.47 nm and −4.91±0.49 mV after dilution with distilled water at a ratio of 1:50 (w/w). The absolute bioavailability of NOR in the NOR-PC-SNEDDS group significantly increased and the value was 372% in relative to NOR group. Further studies indicated that NOR-PC-SNEDDS promoted the oral bioavailability of NOR by enhancing intestinal lymphatic absorption and inhibiting Phase II metabolism of NOR. Conclusion These findings suggested that NOR-PC-SNEDDS was able to promote the oral bioavailability of NOR, which provided a foundation for the further development and application of NOR.
Transcriptome Analysis Reveals That Alfalfa Promotes Rumen Development Through Enhanced Metabolic Processes and Calcium Transduction in Hu Lambs

A healthy gut is very important for young animal development. The rumen of ruminants expands in size with the colonization of microbiota by 2 months of age. This process is promoted by alfalfa intervention. To elucidate the mechanism of this promotion, we performed transcriptomic analyses using a cohort of 23 lambs to evaluate the effects of starter diets plus alfalfa on the development of the rumen wall from the pre- to the postweaning period. The quantitative PCR analyses were used to validate selected genes that were differentially expressed in the transcriptome mapping. We found that several metabolic processes associated with rumen tissue development were affected by solid feed intake, with genes linked to the calcium signaling transduction pathway and the metabolism of pteridine-containing compounds and homocysteine metabolic process being upregulated in the group with alfalfa intervention. The results suggest that the pteridine-containing compounds and calcium signaling are targets for precise regulation of rumen development.
The complete mitogenome of Hong Kong paradise fish (Macropodus hongkongensis), an endemic freshwater fish in South China

Abstract The first complete mitogenome of Hong Kong paradise fish (Macropodus hongkongensis) was determined in this study. The assembled mitogenome is 16,494 bp and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a control region. Nucleotide composition of the complete mitogenome is 30.6% A, 24.8% C, 14.8% G, and 29.8% T, with an A + T bias of 60.4%. The maximum-likelihood tree based on 13 protein-coding genes showed that M. erythropterus was the closest related species to M. hongkongensis.
Cytokinin promotes jasmonic acid accumulation in the control of maize leaf growth

Growth of plant organs results from the combined activity of cell division and cell expansion. The coordination of these two processes depends on the interplay between multiple hormones that determine final organ size. Using the semidominant Hairy Sheath Frayed1 (Hsf1) maize mutant, that hypersignals the perception of cytokinin (CK), we show that CK can reduce leaf size and growth rate by decreasing cell division. Linked to CK hypersignaling, the Hsf1 mutant has increased jasmonic acid (JA) content, a hormone that can inhibit cell division. Treatment of wild type seedlings with exogenous JA reduces maize leaf size and growth rate, while JA deficient maize mutants have increased leaf size and growth rate. Expression analysis revealed increased transcript accumulation of several JA pathway genes in the Hsf1 leaf growth zone. A transient treatment of growing wild type maize shoots with exogenous CK also induced JA pathway gene expression, although this effect was blocked by co-treatment with cycloheximide. Together our results suggest that CK can promote JA accumulation possibly through increased expression of specific JA pathway genes. One sentence summary Cytokinin-signaling upregulates the jasmonate biosynthesis pathway, resulting in jasmonate accumulation and influences on maize leaf growth.