Miracle-dz/UniFAR-FTUs huggingface dataset:
Towards Human-Free Automatic Quality Evaluation of German Summarization

Evaluating large summarization corpora using humans has proven to be expensive from both the organizational and the financial perspective. Therefore, many automatic evaluation metrics have been developed to measure the summarization quality in a fast and reproducible way. However, most of the metrics still rely on humans and need gold standard summaries generated by linguistic experts. Since BLANC does not require golden summaries and supposedly can use any underlying language model, we consider its application to the evaluation of summarization in German. This work demonstrates how to adjust the BLANC metric to a language other than English. We compare BLANC scores with the crowd and expert ratings, as well as with commonly used automatic metrics on a German summarization data set. Our results show that BLANC in German is especially good in evaluating informativeness.
A Graphical Calculus for Lagrangian Relations

Symplectic vector spaces are the phase spaces of linear mechanical systems. The symplectic form describes, for example, the relation between position and momentum as well as current and voltage. The category of linear Lagrangian relations between symplectic vector spaces is a symmetric monoidal subcategory of relations which gives a semantics for the evolution -- and more generally linear constraints on the evolution -- of various physical systems. We give a new presentation of the category of Lagrangian relations over an arbitrary field as a `doubled' category of linear relations. More precisely, we show that it arises as a variation of Selinger's CPM construction applied to linear relations, where the covariant orthogonal complement functor plays the role of conjugation. Furthermore, for linear relations over prime fields, this corresponds exactly to the CPM construction for a suitable choice of dagger. We can furthermore extend this construction by a single affine shift operator to obtain a category of affine Lagrangian relations. Using this new presentation, we prove the equivalence of the prop of affine Lagrangian relations with the prop of qudit stabilizer theory in odd prime dimensions. We hence obtain a unified graphical language for several disparate process theories, including electrical circuits, Spekkens' toy theory, and odd-prime-dimensional stabilizer quantum circuits.
Zipf’s law for cosmic structures: How large are the greatest structures in the universe?

The statistical characterization of the distribution of visible matter in the universe is a central problem in modern cosmology. In this respect, a crucial question still lacking a definitive answer concerns how large the greatest structures in the universe are. This point is closely related to whether or not such a distribution can be approximated as being homogeneous on large enough scales. Here we assess this problem by considering the size distribution of superclusters of galaxies and by leveraging the properties of Zipf–Mandelbrot law, providing a novel approach which complements the standard analysis based on the correlation functions. We find that galaxy superclusters are well described by a pure Zipf’s law with no deviations and this implies that all the catalogs currently available are not sufficiently large to spot a truncation in the power-law behavior. This finding provides evidence that structures larger than the greatest superclusters already observed are expected to be found when deeper redshift surveys will be completed. As a consequence, the scale beyond which galaxy distribution crossovers toward homogeneity, if any, should increase accordingly.
Rovibronic spectra of molecules dressed by light fields

The theory of rovibronic spectroscopy of light-dressed molecules is presented within the framework of quantum mechanically treated molecules interacting with classical light fields. Numerical applications are demonstrated for the homonuclear diatomic molecule Na$_2$, for which the general formulae can be simplified considerably and the physical processes leading to the light-dressed spectra can be understood. The physical origin of different peaks in the light-dressed spectrum of Na$_2$ is given and the light-dressed spectrum is investigated in terms of its dependence on the dressing field's intensity and wavelength, the turn-on time of the dressing field, and the temperature. The important implications of light-dressed spectroscopy on deriving field-free spectroscopic quantities are also discussed.
Combined Biopsy and Imaging-Guided Microwave Ablation by Using a Coaxial Guiding Needle

This article demonstrates the technique of using a coaxial guiding needle to perform combined percutaneous biopsy and microwave ablation via a single tract. From May 2019 to July 2020, 14 patients underwent combined biopsy and microwave ablation by using a coaxial guiding cannula. Tumors were in the kidney of six patients (43%), the liver of six patients (43%), and the lung in two patients (14%). The diagnostic yield of biopsy was 86% (12/14). Ablation technical success rate was 100%. In conclusion, using a coaxial guiding needle in microwave ablation and biopsy is safe and effective.
Therapeutic potential of interleukin-15 in cancer (Review)

The immune system is dysfunctional in cancer, and therapeutic approaches designated to restore immunity and increase long-term overall survival are desirable. The role of immunotherapy is to trigger the immune system to recognize and destroy tumor cells. Interleukin-15 (IL-15) is a member of the common gamma-chain (γc) cytokines that promote the differentiation and expansion of T cells, B cells and natural killer (NK) cells, leading to enhanced antitumor responses. This suggests that IL-15 is a promising candidate for anticancer therapy. Renewed interest in cancer immunotherapy has led to an increased number of preclinical studies and clinical trials that have investigated the reliability and potency of IL-15-based agents, not only as single therapy, but also in combination with others. This review provides a description of these studies which show the advantages and disadvantages of IL-15 as an immunotherapeutic agent. We present here the role of IL-15 and pharmacologically improved IL-15 superagonists as a single treatment or in combination with other therapeutic agents.
On the number of k-skip-n-grams

The paper proves that the number of k-skip-n-grams for a corpus of size $L$ is $$\frac{Ln + n + k' - n^2 - nk'}{n} \cdot \binom{n-1+k'}{n-1}$$ where $k' = \min(L - n + 1, k)$.
Self-compassion, ego-resiliency, coping with stress and the quality of life of parents of children with autism spectrum disorder

Background The literature shows a fairly coherent picture of the types of difficulties parents face. Adaptive both coping styles and resources, such as self-compassion and ego-resiliency, indicated as important predictors of the quality of life among parents of children with autism spectrum disorder. The aim of the study was to determine the links between self-compassion and ego-resiliency, coping with stress and quality of life among parents of children with autism spectrum disorder in a Polish sample (N = 76). Methods A cross-sectional study was conducted. The CISS, Self-Compassion Scale-Short, Ego-Resiliency Scale, and Quality of Life Questionnaire were used. Results Regression analysis was carried out to address the research question. It was confirmed that both resources studied exhibited negative relations with emotion-oriented coping, while ego-resiliency was also positively correlated with task- and avoidance-oriented strategies. The hierarchical multiple regression conducted in three steps indicated that ego-resiliency (18%) and emotion-oriented (14%) were the strongest predictors of quality of life among parents of children with ASD. Conclusions The obtained results proved that ego-resiliency and a task-oriented coping strategy were important indicators of the quality of life of parents of children with ASD.
The Lack of Association between Plant-Based Dietary Pattern and Breast Cancer: a Hospital-Based Case-Control Study

Our purpose was to assess the association between plant-based dietary patterns and breast cancer (BrCa) among Iranian women. This hospital-based case-control study included 150 newly diagnosed BrCa cases and 150 age-matched controls from the Cancer Research Center, Imam Khomeini hospital, Iran. Three indices of a plant-based diet were first calculated: plant-based diet index (PDI), the healthy PDI (hPDI), and the unhealthy PDI (uPDI). In the overall PDI, all plant foods scored positively. In hPDI and uPDI, healthy and less healthy plant foods scored positive, respectively. The adjusted odds ratio (OR) in the highest adherence of PDI was 1.00 (95% confidence interval [CI], 0.55–1.83). In hPDI, 0.89 (95% CI, 0.49–1.62); in uPDI, 1.80 (95% CI, 0.95–3.42). The adjusted OR after subgroup analysis for body mass index (BMI) was as follow, BMI > 25: 0.77(95% CI, 0.37–1.61) comparing highest with the lowest tertile of PDI, 0.91(95% CI, 0.44–1.89) comparing highest with the lowest tertile of hPDI and this value for uPDI was 2.04 (95% CI, 0.91–4.56). BMI < 25: OR for top tertile of PDI was 1.82 (95% CI, 0.48–6.93), top tertile of hPDI was 1.47 (95% CI, 0.35–6.22) and top tertile of uPDI was 2.29 (95% CI, 0.54–9.70). Our results revealed no significant association between none of the PDIs and the chance of BrCa in Iranian women. Continued and expanded research, evaluated by different methods and BrCa is urgently needed to build the foundation for future progress in evidence-based public health efforts.
Genome-wide identification, classification, and expression analysis of the HSF gene family in pineapple (Ananas comosus)

Transcription factors (TFs), such as heat shock transcription factors (HSFs), usually play critical regulatory functions in plant development, growth, and response to environmental cues. However, no HSFs have been characterized in pineapple thus far. Here, we identified 22 AcHSF genes from the pineapple genome. Gene structure, motifs, and phylogenetic analysis showed that AcHSF families were distinctly grouped into three subfamilies (12 in Group A, seven in Group B, and four in Group C). The AcHSF promoters contained various cis-elements associated with stress, hormones, and plant development processes, for instance, STRE, WRKY, and ABRE binding sites. The majority of HSFs were expressed in diverse pineapple tissues and developmental stages. The expression of AcHSF-B4b/AcHSF-B4c and AcHSF-A7b/AcHSF-A1c were enriched in the ovules and fruits, respectively. Six genes (AcHSF-A1a , AcHSF-A2, AcHSF-A9a, AcHSF-B1a, AcHSF-B2a, and AcHSF-C1a) were transcriptionally modified by cold, heat, and ABA. Our results provide an overview and lay the foundation for future functional characterization of the pineapple HSF gene family.
Methyl jasmonate enhances ursolic, oleanolic and rosmarinic acid production and sucrose induced biomass accumulation, in hairy roots of Lepechinia caulescens

Background Ursolic (UA), oleanolic (OA) and rosmarinic (RA) acids are bioactive metabolites found in Lepechinia caulescens that have generated interest for their health benefits, which include antimicrobial, antioxidant, antimutagenic, gastroprotective, antidiabetic, antihypertensive and anti-inflammatory properties, among others. To date, very few attempts have been made to evaluate the potential for simultaneous production of these bioactive compounds, using a biotechnological approach. Hairy root cultures offer a biotechnology approach that can be used to study the factors affecting the biosynthesis and the production of UA, OA and RA. In the current study, we established hairy root cultures of L. caulescens and evaluated the effect of sucrose on biomass accumulation, and the effect of different concentrations and times of exposure of methyl jasmonate (MeJA), on the accumulation of UA, OA and RA. Methods Leaves from plants of L. caulescens were inoculated with Agrobacterium rhizogenes strain ATCC 15834. PCR of rolB gene confirmed the transgenic nature of hairy roots. Hairy roots were subcultured in semisolid MSB5 medium, supplemented with 15, 30, 45 or 60 g/L sucrose and after 4 weeks, dry weight was determined. The accumulation of UA, OA and RA of wild plants and hairy roots were determined by HPLC. Finally, the hairy roots were treated with 0, 100, 200 and 300 µM of MeJA and the content of bioactive compounds was analyzed, after 24, 48 and 72 h. Results High frequency transformation (75%) was achieved, using leaf explants from axenic seedlings, infected with A. rhizogenes. The hairy roots showed an enhanced linear biomass accumulation, in response to the increase in sucrose concentration. The hairy root cultures in MSB5 medium, supplemented with 45 g/L sucrose, were capable to synthesizing UA (0.29 ± 0.00 mg/g DW), OA (0.57 ± 0.00 mg/g DW) and RA (41.66 ± 0.31 mg/g DW), about two, seven and three times more, respectively, than in roots from wild plants. Elicitation time and concentration of MeJA resulted in significant enhancement in the production of UA, OA and RA, with treatments elicited for 24 h, with a concentration of 300 µM of MeJA, exhibiting greatest accumulation. Conclusion This is the first report on development of hairy root cultures of L. caulescens. Future studies should aim towards further improving triterpenes and polyphenolic compound production in hairy roots of L. caulescens, for use in the pharmaceutical and biotechnological industry.
Prediction of DNA binding proteins using local features and long-term dependencies with primary sequences based on deep learning

DNA-binding proteins (DBPs) play pivotal roles in many biological functions such as alternative splicing, RNA editing, and methylation. Many traditional machine learning (ML) methods and deep learning (DL) methods have been proposed to predict DBPs. However, these methods either rely on manual feature extraction or fail to capture long-term dependencies in the DNA sequence. In this paper, we propose a method, called PDBP-Fusion, to identify DBPs based on the fusion of local features and long-term dependencies only from primary sequences. We utilize convolutional neural network (CNN) to learn local features and use bi-directional long-short term memory network (Bi-LSTM) to capture critical long-term dependencies in context. Besides, we perform feature extraction, model training, and model prediction simultaneously. The PDBP-Fusion approach can predict DBPs with 86.45% sensitivity, 79.13% specificity, 82.81% accuracy, and 0.661 MCC on the PDB14189 benchmark dataset. The MCC of our proposed methods has been increased by at least 9.1% compared to other advanced prediction models. Moreover, the PDBP-Fusion also gets superior performance and model robustness on the PDB2272 independent dataset. It demonstrates that the PDBP-Fusion can be used to predict DBPs from sequences accurately and effectively; the online server is at http://119.45. 144.26:8080/PDBP-Fusion/.
Creating Synergies between Citizen Science and Indigenous and Local Knowledge

Abstract Citizen science (CS) is receiving increasing attention as a conduit for Indigenous and local knowledge (ILK) in ecosystem stewardship and conservation. Drawing on field experience and scientific literature, we explore the connection between CS and ILK and demonstrate approaches for how CS can generate useful knowledge while at the same time strengthening ILK systems. CS invites laypersons to contribute observations, perspectives, and interpretations feeding into scientific knowledge systems. In contrast, ILK can be understood as knowledge systems in its own right, with practices and institutions to craft legitimate and useful knowledge. Such fundamental differences in how knowledge is generated, interpreted, and applied need to be acknowledged and understood for successful outcomes. Engaging with complementary knowledge systems using a multiple evidence base approach can improve the legitimacy of CS initiatives, strengthen collaborations through ethical and reciprocal relationships with ILK holders, and contribute to better stewardship of ecosystems.
Response of net primary productivity to grassland phenological changes in Xinjiang, China

Determining the relationship between net primary productivity (NPP) and grassland phenology is important for an in-depth understanding of the impact of climate change on ecosystems. In this study, the NPP of grassland in Xinjiang, China, was simulated using the Carnegie-Ames-Stanford approach (CASA) model with Moderate Resolution Imaging Spectroradiometer (MODIS) grassland phenological (MCD12Q2) data to study trends in phenological metrics, grassland NPP, and the relations between these factors from 2001–2014. The results revealed advancement of the start of the growing season (SOS) for grassland in most regions (55.2%) in Xinjiang. The percentage of grassland area in which the end of the growing season (EOS) was delayed (50.9%) was generally the same as that in which the EOS was advanced (49.1%). The percentage of grassland area with an increase in the length of the growing season (LOS) for the grassland area (54.6%) was greater than that with a decrease in the LOS (45.4%). The percentage of grassland area with an increase in NPP (61.6%) was greater than that with a decrease in NPP (38.4%). Warmer regions featured an earlier SOS and a later EOS and thus a longer LOS. Regions with higher precipitation exhibited a later SOS and an earlier EOS and thus a shorter LOS. In most regions, the SOS was earlier, and spring NPP was higher. A linear statistical analysis showed that at various humidity (K) levels, grassland NPP in all regions initially increased but then decreased with increasing LOS. At higher levels of K, when NPP gradually increased, the LOS gradually decreased.
A Toll-like receptor identified in Gigantidas platifrons and its potential role in the immune recognition of endosymbiotic methane oxidation bacteria

Symbiosis with chemosynthetic bacteria is an important ecological strategy for the deep-sea megafaunas including mollusks, tubeworms and crustacean to obtain nutrients in hydrothermal vents and cold seeps. How the megafaunas recognize symbionts and establish the symbiosis has attracted much attention. Bathymodiolinae mussels are endemic species in both hydrothermal vents and cold seeps while the immune recognition mechanism underlying the symbiosis is not well understood due to the nonculturable symbionts. In previous study, a lipopolysaccharide (LPS) pull-down assay was conducted in Gigantidas platifrons to screen the pattern recognition receptors potentially involved in the recognition of symbiotic methane-oxidizing bacteria (MOB). Consequently, a total of 208 proteins including GpTLR13 were identified. Here the molecular structure, expression pattern and immune function of GpTLR13 were further analyzed. It was found that GpTLR13 could bind intensively with the lipid A structure of LPS through surface plasmon resonance analysis. The expression alternations of GpTLR13 transcripts during a 28-day of symbiont-depletion assay were investigated by real-time qPCR. As a result, a robust decrease of GpTLR13 transcripts was observed accompanying with the loss of symbionts, implying its participation in symbiosis. In addition, GpTLR13 transcripts were found expressed exclusively in the bacteriocytes of gills of G. platifrons by in situ hybridization. It was therefore speculated that GpTLR13 may be involved in the immune recognition of symbiotic methane-oxidizing bacteria by specifically recognizing the lipid A structure of LPS. However, the interaction between GpTLR13 and symbiotic MOB was failed to be addressed due to the nonculturable symbionts. Nevertheless, the present result has provided with a promising candidate as well as a new approach for the identification of symbiont-related genes in Bathymodiolinae mussels.
Gas Sensing Ionic Liquids on Quartz Crystal Microbalance

Recent advances in “designer solvents” have facilitated the development of ultrasensi‐ tive gas sensing ionic liquids (SILs) based on quartz crystal microbalance (QCM) that can real‐time detect and discriminate volatile molecules. The amalgamation of tailored‐made SILs and label‐free QCM resulted in a new class of qualitative and semi‐quantitative gas sensing device, which represents a model system of electronic nose. Because a myriad of human‐made or naturally occurring volatile organic compounds (VOCs) are of great interest in many areas, several functional SILs have been designed to detect gaseous alde‐ hyde, ketone, amine and azide molecules chemoselectively in our laboratory. The versa‐ tility of this platform lies in the selective capture of volatile compounds by thin‐coated reactive SILs on QCM at room temperature. Notably, the detection limit of the proto‐ type system can be as low as single‐digit parts‐per‐billion. This chapter briefly introduces some conventional gas sensing approaches and collates recent research results in the inte‐ gration of SILs and QCM and finally gives an account of the state‐of‐the‐art gas sensing technology.
A 90-Day Oral Toxicity of Hydroethanolic Root Extract of Carissa spinarum in Wistar Rats

Background Herbal medication is a worldwide and ancient practice, mostly in developing countries, where a large part of the population is involved in this practice. Hence, studies must be conducted to evaluate their safety and efficiency to avoid or prevent toxicological risks due to their usage. In Togo, Carissa spinarum is a medicinal plant belonging to Apocynaceae family, used as an aphrodisiac or to heal some ailments including malaria, sickle cell anemia, hypertension, pain, and asthma. Notwithstanding its several ethnomedicinal benefits, just a few toxicological data associated with its chronic use are available. Objective Therefore, this study aims to assess the toxicity of an ethanolic root extract of Carissa spinarum in Wistar rats. Methods The 90-day oral toxicity process following OECD TG 408 guidelines is used. Male Wistar rats received Carissa spinarum root hydroethanolic extract at 500 and 1000 mg/kg for 90 days by oral gavage. Body weight changes, hematological and blood biochemical parameters, organ weight changes, malondialdehyde as a lipoperoxidation marker expressed according to tissue proteins, and histopathology of vital organs were assessed. Results No signs of toxicity or mortality were observed during the 90 days experiment. Hematological parameters have not shown any treatment-related abnormalities. According to biochemical parameters, an increase in the chloride ion level was observed at 1000 mg/kg (p < 0.01). There was no significant difference between the treated groups and the control group concerning the malondialdehyde concentration, body weight, and organ relative weight. No changes in necropsy and histopathology of vital organs associated with extract treatment were observed. Conclusion The results indicated that an ethanolic root extract of Carissa spinarum does not cause adverse effects, which can lead to Wistar rats' death after 90-day oral administration at 500 and 1000 mg.
Resolution estimates for simple one-dimensional flames

The accurate resolution of flame structure is critically important to the direct numerical simulation of reacting flows. While grid-resolution estimates are readily available for cold flows, premixed flames appear to have received relatively little attention. In this paper, a premixed flame characterised by single-step chemistry at moderate-to-high Zel'dovitch numbers (β) is analysed, and its structure is used to provide estimates for sufficient grid resolution. It is found that the critical region of the flame exhibits a weak inverse Zel'dovitch number dependence, and that heuristic methods of resolution estimation based on flame thickness grow relatively less meaningful as β → ∞. Resolution estimates for second- and fourth-order finite-difference schemes are provided.