Miracle-dz/UniFAR-FTUs huggingface dataset:
Epidemiology of Erosive Tooth Wear, Dental Fluorosis and Molar Incisor Hypomineralization in the American Continent.

Non-carious dental lesions such as developmental defects of enamel (DDE) and erosive tooth wear (ETW) are the subject of intensive research. This paper aims to give perspectives on both DDE, including dental fluorosis and molar incisor hypomineralization (MIH), and ETW, presenting epidemiological data from the Americas and associated diagnostic aspects. Besides, it is important to present evidence to guide the clinical assessment process, supporting the clinicians' management decisions towards better oral health of their patients. The overall increase in the worldwide prevalence of non-carious lesions discussed in this this paper may reflect the need of perceptual changes. Although the number of publications related to these conditions has been increasing in the last years, there is still a need for clinical diagnostic and management awareness to include these conditions in routine dental practice. Besides, it is important to provide recommendations for standardized clinical assessment criteria, improving the process and helping clinicians' adherence. In this sense, this paper discusses the most commonly implemented indices for each condition. Thus, despite the wide range of diagnostic indices, BEWE is proposed to be the index recommended for ETW assessment, Dean or Thylstrup & Fejerskov indices for fluorosis and preferably the EAPD criteria (or modified DDE index) for MIH. Overall, non-carious lesions are a growing concern, and it is important to implement preventive measures that control their severity and progression, and accurate diagnosis by the dental clinician.
Revealing of Non-Cultivable Bacteria Associated with the Mycelium of Fungi in the Kerosene-Degrading Community Isolated from the Contaminated Jet Fuel

Fuel (especially kerosene) biodamage is a challenge for global industry. In aviation, where kerosene is a widely used type of fuel, its biodeterioration leads to significant damage. Six isolates of micromycetes from the TS-1 aviation kerosene samples were obtained. Their ability to grow on the fuel was studied, and the difference between biodegradation ability was shown. Micromycetes belonged to the Talaromyces, Penicillium, and Aspergillus genera. It was impossible to obtain bacterial isolates associated with their mycelium. However, 16S rRNA metabarcoding and microscopic observations revealed the presence of bacteria in the micromycete isolates. It seems to be that kerosene-degrading fungi were associated with uncultured bacteria. Proteobacteria, Actinobacteria, Bacteroidetes, and Firmicutes were abundant in the fungal cultures isolated from the TS-1 jet fuel samples. Most genera among these phyla are known as hydrocarbon degraders. Only bacteria-containing micromycete isolates were able to grow on the kerosene. Most likely, kerosene degradation mechanisms are based on synergism of bacteria and fungi.
Efficacy of a Turkey Herpesvirus Vectored Newcastle Disease Vaccine against Genotype VII.1.1 Virus: Challenge Route Affects Shedding Pattern

The control of Newcastle disease (ND) highly relies on vaccination. Immunity provided by a ND vaccine can be characterized by measuring the level of clinical protection and reduction in challenge virus shedding. The extent of shedding depends a lot on the characteristics of vaccine used and the quality of vaccination, but influenced also by the genotype of the challenge virus. We demonstrated that vaccination of SPF chicks with recombinant herpesvirus of turkey expressing the F-gene of genotype I ND virus (rHVT-ND) provided complete clinical protection against heterologous genotype VII.1. 1 ND virus strain and reduced challenge virus shedding significantly. 100% of clinical protection was achieved already by 3 weeks of age, irrespective of the challenge route (intra-muscular or intra-nasal) and vaccination blocked cloacal shedding almost completely. Interestingly, oro-nasal shedding was different in the two challenge routes: less efficiently controlled following intra-nasal than intra-muscular challenge. Differences in the shedding pattern between the two challenge routes indicate that rHVT-ND vaccine induces strong systemic immunity, that is capable to control challenge virus dissemination in the body (no cloacal shedding), even when it is a heterologous strain, but less efficiently, although highly significantly (p < 0.001) suppresses the local replication of the challenge virus in the upper respiratory mucosa and consequent oro-nasal shedding.
Vascular activation is a strong predictor of mortality in coronavirus disease 2019 patients on the ICU.

Respiratory failure in coronavirus disease 2019 (COVID-19) patients is one of the most frequent causes for referral to the ICU. A significant percentage of these patients does not survive the infection due to thromboembolic complications. Furthermore, the vascular system seems also to be involved in the pathogenesis. To investigate the role of hemostasis and endothelium on the outcome of COVID-19 patients admitted to the ICU. Blood was drawn from 16 ICU COVID-19 patients for hemostatic analysis. Patients were followed-up till discharge (n = 11) or death (n = 5). Parameters related to both coagulation and fibrinolysis, though disturbed, were not associated with mortality. Contrarily, activated Von Willebrand factor was increased and ADAMTS13 levels were decreased by two-fold in nonsurvivors compared with survivors. Our data established the involvement of the Von Willebrand factor-ADAMTS13 axis in the COVID-19 pathogenesis, thereby demonstrating that these plasma proteins seem to be strong predictors for ICU mortality.
Dendritic polymers composed of glycerol and succinic acid: Synthetic methodologies and medical applications

Abstract Research on dendrimers continues to expand as further advances in synthetic methodology and characterization techniques translate to additional applications. Recently, dendritic polymers composed of the natural metabolites glycerol and succinic acid were synthesized, functionalized, and evaluated as new medical materials. The design and synthesis of poly(glycerol-succinic acid) dendritic polymers are discussed, including comparing and contrasting the convergent versus the divergent methodologies for preparing such macromolecules. Finally, a photocrosslinkable dendritic macromolecule was prepared and successfully used to close linear corneal lacerations as well as to secure LASIK flaps.
Complete Genome Sequence of Halomonas sp. Strain SH5A2, a Dye-Degrading Halotolerant Bacterium Isolated from the Salinas and Aguada Blanca National Reserve in Peru

Halomonas sp. strain SH5A2 is a halotolerant bacterium isolated from Salinas Lake at 4,300 m above sea level in Peru. Here, we report its complete genome sequence with a length of 3,849,224 bp and highlight the presence of genes putatively related to dye degradation, such as NADPH-dependent oxidoreductases. ABSTRACT Halomonas sp. strain SH5A2 is a halotolerant bacterium isolated from Salinas Lake at 4,300 m above sea level in Peru. Here, we report its complete genome sequence with a length of 3,849,224 bp and highlight the presence of genes putatively related to dye degradation, such as NADPH-dependent oxidoreductases.
Microbial Diversity Analysis of Sediment from Yeosu New Harbor of South Korea Using 16S rRNA Gene Amplicon Sequencing

The Yeosu New Harbor in the South Korean benthic environment shows a mesotrophic environment affected by the Tsushima Current and the Seomjin River. Here, we report microbial diversity in sediments of Yeosu New Harbor based on 16S rRNA gene amplicon sequencing. The dominant bacterial phylum was Proteobacteria (relative abundance, 72.5 to 78.1%). ABSTRACT The Yeosu New Harbor in the South Korean benthic environment shows a mesotrophic environment affected by the Tsushima Current and the Seomjin River. Here, we report microbial diversity in sediments of Yeosu New Harbor based on 16S rRNA gene amplicon sequencing. The dominant bacterial phylum was Proteobacteria (relative abundance, 72.5 to 78.1%).
Genome Sequence of Mycobacterium abscessus Phage phiT46-1

Mycobacteriophage phiT46-1 is a newly isolated Mycobacterium phage that was isolated by spontaneous release from Mycobacterium abscessus strain Taiwan-46 and infects M. abscessus strain BWH-C. Phage phiT46-1 is unrelated to previously described mycobacteriophages, has a 52,849-bp genome, and includes a polymorphic toxin-immunity cassette associated with type VII secretion systems. ABSTRACT Mycobacteriophage phiT46-1 is a newly isolated Mycobacterium phage that was isolated by spontaneous release from Mycobacterium abscessus strain Taiwan-46 and infects M. abscessus strain BWH-C. Phage phiT46-1 is unrelated to previously described mycobacteriophages, has a 52,849-bp genome, and includes a polymorphic toxin-immunity cassette associated with type VII secretion systems.
BK Polyomavirus Genotypes in Two Patients after Hematopoietic Cell Transplant

BK polyomavirus (BKPyV) infection can lead to nephropathy and hemorrhagic cystitis (HC). We evaluated BKPyV genotypes in two individuals after hematopoietic cell transplant (HCT). The first case developed HC and was infected with genotype Ib-2, while the second did not develop HC and was infected with genotype Ia. ABSTRACT BK polyomavirus (BKPyV) infection can lead to nephropathy and hemorrhagic cystitis (HC). We evaluated BKPyV genotypes in two individuals after hematopoietic cell transplant (HCT). The first case developed HC and was infected with genotype Ib-2, while the second did not develop HC and was infected with genotype Ia.
Vortex impingement onto an axisymmetric obstacle – subcritical bifurcation to vortex breakdown

Abstract A swirling wake flow submitted to an adverse pressure gradient is studied by bifurcation analysis, modal analysis and direct numerical simulations. In contrast to experiments in diverging tubes, the adverse pressure gradient is imposed by the presence of a downstream axisymmetric obstacle centred on the vortex axis. Different adverse pressure gradients are investigated by modifying the obstacle radius, which results in the deceleration of the vortex axial velocity. Hence, vortex breakdown occurs for a sufficiently large pressure gradient. We observe a spiral vortex breakdown type without any recirculation bubble, which contrasts with classical spiral vortex breakdown developing in the bubble wake. A weakly nonlinear analysis is performed to characterize this self-sustained instability. The resulting Landau equation reveals the sub-critical character of this Hopf bifurcation, highlighting a sub-critical vortex breakdown. In addition, the stabilization mechanism of this spiral vortex breakdown caused by an off-centre displacement of the downstream axisymmetric obstacle is investigated by direct numerical simulations. Nonlinear dynamics, such as a quasi-periodic state, is observed as a consequence of nonlinear interactions between the spiral vortex breakdown and the misalignment of the obstacle before the stabilization occurs.
The mineralogy of the historical Mochalin Log REE deposit, South Urals, Russia. Part II. Radekškodaite-(La), (CaLa5)(Al4Fe2+)[Si2O7][SiO4]5O(OH)3 and radekškodaite-(Ce), (CaCe5)(Al4Fe2+)[Si2O7][SiO4]5O(OH)3, two new minerals with a novel structure-type belonging to the epidote–törnebohmite polysomat

Abstract Two new isostructural minerals radekškodaite-(La) (CaLa5)(Al4Fe2+)[Si2O7][SiO4]5O(OH)3 and radekškodaite-(Ce) (CaCe5)(Al4Fe2+)[Si2O7][SiO4]5O(OH)3 were discovered in polymineralic nodules from the Mochalin Log REE deposit, South Urals, Russia. Radekškodaite-(La) is associated with allanite-(Ce), allanite-(La), bastnäsite-(Ce), bastnäsite-(La), ferriallanite-(Ce), ferriallanite-(La), ferriperbøeite-(La), fluorbritholite-(Ce), törnebohmite-(Ce) and törnebohmite-(La). Radekškodaite-(Ce) is associated with ancylite-(Ce), bastnäsite-(Ce), bastnäsite-(La), lanthanite-(La), perbøeite-(Ce) and törnebohmite-(Ce). The new minerals form isolated anhedral grains up to 0.35 × 0.75 mm [radekškodaite-(La)] and 1 mm × 2 mm [radekškodaite-(Ce)]. Both minerals are greenish-brown with vitreous lustre. Dcalc = 4.644 [radekškodaite-(La)] and 4.651 [radekškodaite-(Ce)] g cm–3. Both minerals are optically biaxial (+); radekškodaite-(La): α = 1.790(7), β = 1.798(5), γ = 1.825(8) and 2Vmeas = 60(10)°; radekškodaite-(Ce): α = 1.798(6), β = 1.806(6), γ = 1.833(8) and 2Vmeas = 65(10)°. Chemical data [wt. %, electron-microprobe; FeO:Fe2O3 by charge balance; H2O by stochiometry; radekškodaite-(La)/radekškodaite-(Ce)] are: CaO 3.40/2.74, La2O3 27.68/22.23, Ce2O3 20.39/24.30, Pr2O3 0.94/1.48, Nd2O3 1.71/3.18, ThO2 0.23/0.24, MgO 0.85/1.04, Al2O3 10.35/10.84, MnO 0.64/0.69, FeO 2.55/2.76, Fe2O3 3.12/2.57, TiO2 0.13/0.04, SiO2 26.03/26.10, F 0.10/0.09, H2O 1.62/1.63, –O=F –0.04/–0.04, total 99.70/99.89. The empirical formulae based on O28(OH,F)3 are: radekškodaite-(La): (Ca0.98Th0.01La2.75Ce2.01Nd0.16Pr0.09)Σ6. 00(Al3.28Fe3+0.63Fe2+0.57Mg0.34Mn0.15Ti0.03)Σ5. 00Si7.00O28[(OH)2.91F0.09]; radekškodaite-(Ce): (Ca0.79Mn0.16Th0.01Ce2.39La2.20Nd0.30Pr0.14)Σ5. 99(Al3.43Fe2+0.62Fe3+0.52Mg0.42Ti0.01)Σ5. 00Si7.00O28[(OH)2.92F0. 08]. Both minerals are monoclinic, P21/m; the unit-cell parameters [radekškodaite-(La)/radekškodaite-(Ce)] are: a = 8.9604(3)/8.9702(4), b = 5.7268(2)/5.7044(2), c = 25.1128(10)/25.1642(13) Å, β = 116.627(5)/116.766(6)°, V = 1151.98(7)/1149.68(11) Å3 and Z = 2/2. The crystal structures are solved based on single-crystal X-ray diffraction data; R = 0.0554 [radekškodaite-(La)] and 0.0769 [radekškodaite-(Ce)]. Both minerals belong to the epidote–törnebohmite polysomatic series and represent first members of ET2-type: their structure consists of regular alternating modules, one slab of the epidote (E) structure and two slabs of törnebohmite (T). The rootname radekškodaite is given in honor of the Czech mineralogist Radek Škoda (born 1979), Associate Professor at Masaryk University, Brno, Czech Republic. The suffix-modifier -(La) or -(Ce) indicates the predominance of La or Ce among REE in the mineral.
Steric stabilisation of self-assembled cubic lyotropic liquid crystalline nanoparticles: high throughput evaluation of triblock polyethylene oxide-polypropylene oxide-polyethylene oxide copolymers

Nanostructured cubic lyotropic liquid crystalline colloidal particles (Cubosomes™) are of interest for applications such as drug and biomedical imaging agent encapsulation systems. Maintaining the stability and integrity of these nanoparticles over time is essential for their storage and application. It is well known that the triblock polyethylene oxide-polypropylene oxide-polyethylene oxide (PEO-PPO-PEO) copolymer, Pluronic F127, imparts a steric barrier to aggregation of non-lamellar lyotropic liquid crystalline particles. However, few other stabilisers have been reported for these systems. Using high throughput methodologies to prepare and characterise dispersions of monoolein and phytantriol, the performance of a wide range of triblock PEO-PPO-PEO copolymers (Pluronics) was evaluated for optimal stabilisation of cubosomes. It is shown that Pluronic F108 is superior to Pluronic F127 as a stabiliser of monoolein based nanostructured particles, as it preserves the integrity of the double diamond inverse bicontinuous cubic phase internal structure of the particles, whilst maintaining colloidal stability.
Artificial intelligence in upper GI endoscopy ‐ current status, challenges and future promise

White‐light endoscopy with biopsy is the current gold standard modality for detecting and diagnosing upper gastrointestinal (GI) pathology. However, missed lesions remain a challenge. To overcome interobserver variability and learning curve issues, artificial intelligence (AI) has recently been introduced to assist endoscopists in the detection and diagnosis of upper GI neoplasia. In contrast to AI in colonoscopy, current AI studies for upper GI endoscopy are smaller pilot studies. Researchers currently lack large volume, well‐annotated, high‐quality datasets in gastric cancer, dysplasia in Barrett's esophagus and early esophageal squamous cell cancer. This review will look at the latest studies of AI in upper GI endoscopy, discuss some of the challenges facing researchers, and predict what the future may hold in this rapidly changing field.
Myelin development in visual scene-network tracts beyond late childhood: A multimethod neuroimaging study

The visual scene-network—comprising the parahippocampal place area (PPA), retrosplenial cortex (RSC), and occipital place area (OPA)—shows a prolonged functional development. Structural development of white matter that underlies the scene-network has not been investigated despite its potential influence on scene-network function. The key factor for white matter maturation is myelination. However, research on myelination using the gold standard method of post-mortem histology is scarce. In vivo alternatives diffusion-weighed imaging (DWI) and myelin water imaging (MWI) so far report broad-scale findings that prohibit inferences concerning the scene-network. Here, we combine MWI, DWI tractography, and fMRI to investigate myelination in scene-network tracts in middle childhood, late childhood, and adulthood. We report increasing myelin from middle childhood to adulthood in left RSC-OPA, and trends towards increases in the right RSC-OPA, left PPA-RSC and right PPA-OPA tracts. Moreover, tracts connecting the OPA to the key input region hippocampus showed myelin increases beyond late childhood. Our findings indicate that structural development coincides with functional development in the scene network, possibly enabling structure-function interactions. Highlights Myelin in intrahemispheric scene-network tracts increases beyond late childhood PA-hippocampus tracts also show prolonged myelination Diffusion tensor imaging parameters do not mirror myelin water fraction results
Metagenomic Insights Into the Microbial Assemblage Capable of Quorum Sensing and Quorum Quenching in Particulate Organic Matter in the Yellow Sea

Quorum sensing (QS) is a density-dependent communicating mechanism that allows bacteria to regulate a wide range of biogeochemical important processes and could be inhibited by quorum quenching (QQ). Increasing researches have demonstrated that QS can affect the degradation of particulate organic matter (POM) in the photic zone. However, knowledge of the diversity and variation of microbial QS and QQ systems in sinking POM is scarce. Here, POM samples were collected from surface seawater (SW), bottom seawater (BW), and surficial sediment (SS) in the Yellow Sea of China. 16S rRNA gene amplicon and metagenome sequencing were performed to analyze the community structure of particle-associated microorganisms and distribution of QS genes [acylated homoserine lactone (AHL) synthesizing gene luxI and AHL sensing gene luxR] and QQ genes (genes encoding for AHL lactonase and acylase) in POM. Shifting community structures were observed at different sampling depths, with an increase of microbial abundance and diversity from SW to BW. Along with the variation of microbial communities, the abundances of luxI and luxR decreased slightly but were restored or even exceeded when POM arrived at SS. Comparatively, abundances of AHL lactonase and acylase remained constant during the transportation process from SW to BW but increased dramatically in SS. Correlation tests indicated that abundances of luxI and luxR were positively correlated with temperature, while those of AHL acylase were positively correlated with depth, SiO42–, PO43–, and NO3–, but negatively correlated with temperature and pH. According to phylogenetic analyses, the retrieved QS and QQ genes are more diverse and distinctive than ever experimentally identified. Besides, the vertical transmission of QS and QQ genes along with POM sinking was observed, which could be one of the key factors leading to the prevalence of QS and QQ genes in marine ecosystems. Overall, our results increase the current knowledge of QS and QQ metabolic pathways in marine environment and shed light on the intertwined interspecies relationships to better investigate their dynamics and ecological roles in POM cycling.
Gemmatimonas groenlandica sp. nov. Is an Aerobic Anoxygenic Phototroph in the Phylum Gemmatimonadetes

The bacterial phylum Gemmatimonadetes contains members capable of performing bacteriochlorophyll-based phototrophy (chlorophototrophy). However, only one strain of chlorophototrophic Gemmatimonadetes bacteria (CGB) has been isolated to date, hampering our further understanding of their photoheterotrophic lifestyle and the evolution of phototrophy in CGB. By combining a culturomics strategy with a rapid screening technique for chlorophototrophs, we report the isolation of a new member of CGB, Gemmatimonas (G.) groenlandica sp. nov., from the surface water of a stream in the Zackenberg Valley in High Arctic Greenland. Distinct from the microaerophilic G. phototrophica strain AP64T, G. groenlandica strain TET16T is a strictly aerobic anoxygenic phototroph, lacking many oxygen-independent enzymes while possessing an expanded arsenal for coping with oxidative stresses. Its pigment composition and infra-red absorption properties are also different from G. phototrophica, indicating that it possesses a different photosystem apparatus. The complete genome sequence of G. groenlandica reveals unique and conserved features in the photosynthesis gene clusters of CGB. We further analyzed metagenome-assembled genomes of CGB obtained from soil and glacier metagenomes from Northeast Greenland, revealing a wide distribution pattern of CGB beyond the stream water investigated.
Internet Memes: Leaflet Propaganda of the Digital Age

Internet memes are one of the latest evolutions of “leaflet” propaganda and an effective tool in the arsenal of digital persuasion. In the past such items were dropped from planes, now they find their way into social media across multiple platforms and their territory is global. Internet memes can be used to target specific groups to help build and solidify tribal bonds. Due to the ease of creation, and their ability to constantly reaffirm axiomatic tribal ideas, they have become an adroit tool allowing for mass influence across international borders. This text explores the link between internet memes and their ability to “hack” the attention of anyone connected to internet using dense modality and cognitive biases. Furthermore, the text discusses Internet meme's ability sew discord by consistently reaffirming preexisting tribal bonds and their relation to traditional PSYOP tactics initially used for analog leaflet propaganda.