Miracle-dz/UniFAR-FTUs huggingface dataset:
Immature platelets as a novel biomarker for adverse cardiovascular events in patients after non-cardiac surgery

Summary This study evaluates whether immature platelets (IPF) determined in the post anesthesia care unit (PACU) can predict major adverse cardiovascular events (MACE) or other thromboembolic events after intermediate and high-risk surgery. IPF are increased in patients with acute coronary syndrome and recently gained interest as novel biomarker for risk stratification. In this prospective observational trial 732 patients undergoing intermediate or high-risk non-cardiac surgery were enrolled (NCT02097602). IPF was measured preoperatively and postoperatively in the PACU. Primary outcome was a composite endpoint defined as MACE, deep vein thrombosis or pulmonary embolism during hospital stay (modMACE). A cut off for IPF identifying a threshold between a low and high risk for modMACE was calculated by logrank optimization. A multivariate Cox regression was calculated in a forward stepwise manner to assess the relation between this IPF cut off and modMACE as well as other established risk factors (inclusion if p<0.05). Preoperatively, there were no differences in IPF between patients with and without modMACE (3.1% [2.2% – 4.7%](median [interquartile range]) vs. 2.8% [1.9% – 4.3%]. Patients with modMACE (28 of 730 patients; 3.8%) had higher IPF values in the PACU compared to patients without modMACE (3.6% [2.6–6%] vs. 2.9% [2–4.4%]; p=0.011). The optimal cut off of IPF > 5.4% was associated with an increased risk for modMACE after adjustment for covariates (hazard ratio: 2.528; 95% confidence interval: 1.156 to 5.528, p=0.02). In conclusion, IPF is an independent predictor of modMACE after surgery and might improve risk stratification of surgical patients. Institution where the work was performed and funded: Klinikum rechts der Isar der Technischen Universität München, Ismaningerstr. 22, 81675 Munich, Germany.
Priming of innate antimycobacterial immunity by heat-killed Listeria monocytogenes induces sterilizing response in the adult zebrafish tuberculosis model

ABSTRACT Mycobacterium tuberculosis remains one of the most problematic infectious agents, owing to its highly developed mechanisms to evade host immune responses combined with the increasing emergence of antibiotic resistance. Host-directed therapies aiming to optimize immune responses to improve bacterial eradication or to limit excessive inflammation are a new strategy for the treatment of tuberculosis. In this study, we have established a zebrafish-Mycobacterium marinum natural host-pathogen model system to study induced protective immune responses in mycobacterial infection. We show that priming adult zebrafish with heat-killed Listeria monocytogenes (HKLm) at 1 day prior to M. marinum infection leads to significantly decreased mycobacterial loads in the infected zebrafish. Using rag1−/− fish, we show that the protective immunity conferred by HKLm priming can be induced through innate immunity alone. At 24 h post-infection, HKLm priming leads to a significant increase in the expression levels of macrophage-expressed gene 1 (mpeg1), tumor necrosis factor α (tnfa) and nitric oxide synthase 2b (nos2b), whereas superoxide dismutase 2 (sod2) expression is downregulated, implying that HKLm priming increases the number of macrophages and boosts intracellular killing mechanisms. The protective effects of HKLm are abolished when the injected material is pretreated with nucleases or proteinase K. Importantly, HKLm priming significantly increases the frequency of clearance of M. marinum infection by evoking sterilizing immunity (25 vs 3.7%, P=0.0021). In this study, immune priming is successfully used to induce sterilizing immunity against mycobacterial infection. This model provides a promising new platform for elucidating the mechanisms underlying sterilizing immunity and to develop host-directed treatment or prevention strategies against tuberculosis. This article has an associated First Person interview with the first author of the paper. Summary: Heat-killed Listeria monocytogenes induces immune responses that lead to increased clearance of mycobacterial infection in the adult zebrafish tuberculosis model via innate immune mechanisms.
Comparison of the Efficacy of Different Food Attractants and Their Concentration for Melon Fly (Diptera: Tephritidae)

Abstract The relative attractiveness of six commercially available protein hydrolysates and the influence of their concentration were evaluated in field cages by a release-capture method of lab-reared melon fly adults, Bactrocera cucurbitae (Coquillett). Buminal, Corn Steepwater, Hym-Lure, Pinnacle, Nulure, and SolBait were tested for both sexes of the melon fly. The tested products exhibited clear differences in attractiveness. SolBait was the most effective protein hydrolysate. Pinnacle and Corn Steepwater also gave promising results. A general tendency for an increase in effectiveness with increasing concentration within the range 0.5 to 10% was shown. This study will allow pest control practitioners to choose more effective attractants for use in bait sprays to control the melon fly thus reducing the intensive use of insecticides currently practiced in Reunion island and enabling the development of Integrated pest management (IPM) methods for cucurbit crops.
Realistic indoor path loss modeling for regular WiFi operations in India

Indoor wireless communication using Wireless Fidelity (WiFi) is becoming a major need for the success of Internet of Things (IoT) and cloud robotics in both developed and developing countries. With different operating conditions, interference, obstacles and type of building materials used, it is difficult to predict the path loss components in an indoor environment, which are crucial for the network design. It has been observed that the indoor path loss models proposed for western countries cannot be directly used in Indian scenarios due to variations in building materials utilized, floor plans, etc. In this paper, we have proposed a non-deterministic statistical indoor path loss model-Tata Indoor Path Loss Model (T-IPLM) which can be used for the 2.4–2.5 GHz, Industrial Scientific and Medical (ISM) band. To propose and validate, we have conducted several drive tests with different conditions such as busy office premise with obstacles, open office premise, corridor, canteen, and multistorey office locations, etc. We have also compared T-IPLM with popular path loss models such as ITU-R and Log-distance; T-IPLM matches closely with the drive test results as compared to other models. We believe that T-IPLM model can be used extensively to design accurate indoor communication networks required for regular WiFi communications and deployment and operations of IoT and cloud robotics.
FoxP2 isoforms delineate spatiotemporal transcriptional networks for vocal learning in the zebra finch

Human speech is one of the few examples of vocal learning among mammals yet ~half of avian species exhibit this ability. Its neurogenetic basis is largely unknown beyond a shared requirement for FoxP2 in both humans and zebra finches. We manipulated FoxP2 isoforms in Area X, a song-specific region of the avian striatopallidum analogous to human anterior striatum, during a critical period for song development. We delineate, for the first time, unique contributions of each isoform to vocal learning. Weighted gene coexpression network analysis of RNA-seq data revealed gene modules correlated to singing, learning, or vocal variability. Coexpression related to singing was found in juvenile and adult Area X whereas coexpression correlated to learning was unique to juveniles. The confluence of learning and singing coexpression in juvenile Area X may underscore molecular processes that drive vocal learning in young zebra finches and, by analogy, humans.
Comparing Lexical Analysis Tools for Buffer Overflow Detection in Network Software

Many of the bugs in distributed software modules are security vulnerabilities, the most common and also the most exploited of which are buffer overflows and they typically arise in programs written in the C language. This paper, focusing on static analysis tools for detecting buffer overflows in C programs, presents a methodology for experimentally evaluating and comparing the main objective features of such tools. The proposed method is based on testing all the tools on a common set of publicly available, open source software packages, and makes use of specific metrics defined to evaluate the main tool features. In particular, the evaluation aims at quantifying how close the tool is to a complete and sound tool. Our approach has been applied for an initial evaluation of the class of static analysis tools that are based on lexical analysis, using as test cases three well known network software packages. The results obtained, illustrated and commented on in this paper, offer some interesting indications
A Dynamic Manipulation Strategy for an Intervention: Autonomous Underwater Vehicle

This paper presents the modelling and the control architecture of an Autonomous Underwater Vehicle for Intervention (I-AUV). Autonomous underwater manipulation with free-floating base is still an open topic of research, far from reaching an industrial product. Dynamic manipulation tasks, where relevant vehicle velocities are required during manipulation, over an additional challenge. In this paper, the accurate modelling of an I-AUV is described, not neglecting the interaction with the fluid. A grasp planning strategy is proposed and integrated in the control of the whole system. The performances of the I-AUV have been analysed by means of simulations of a dynamic manipulation task.
Detonation Velocity Measurement with Chirped Fiber Bragg Grating

Detonation velocity is an important parameter for explosive, and it is crucial for many fields such as dynamic chemistry burn models, detonation propagation prediction, explosive performance estimation, and so on. Dual-channel detonation velocity measurement method and system are described. The CFBG sensors are pasted both on the surface and in the center of the explosive cylinder. The length of CFBG sensors is measured via the hot-tip probe method. The light intensity reflected from the CFBG sensors attached to the explosive is transformed to voltage, and the voltage–time is then measured with the oscilloscope. According to the five experiments results, the relative standard uncertainty of detonation velocity is below 1%.
CD28 Costimulation Is Essential for Human T Regulatory Expansion and Function1

The costimulatory requirements required for peripheral blood T regulatory cells (Tregs) are unclear. Using cell-based artificial APCs we found that CD28 but not ICOS, OX40, 4-1BB, CD27, or CD40 ligand costimulation maintained high levels of Foxp3 expression and in vitro suppressive function. Only CD28 costimulation in the presence of rapamycin consistently generated Tregs that consistently suppressed xenogeneic graft-vs-host disease in immunodeficient mice. Restimulation of Tregs after 8–12 days of culture with CD28 costimulation in the presence of rapamycin resulted in >1000-fold expansion of Tregs in <3 wk. Next, we determined whether other costimulatory pathways could augment the replicative potential of CD28-costimulated Tregs. We observed that while OX40 costimulation augmented the proliferative capacity of CD28-costimulated Tregs, Foxp3 expression and suppressive function were diminished. These studies indicate that the costimulatory requirements for expanding Tregs differ from those for T effector cells and, furthermore, they extend findings from mouse Tregs to demonstrate that human postthymic Tregs require CD28 costimulation to expand and maintain potent suppressive function in vivo.
Effects of STC1 overexpression on tumorigenicity and metabolism of hepatocellular carcinoma

Stanniocalcin-1 (STC1) is a paracrine factor associated with inflammation and carcinogenesis. Using clinicopathological data, we previously reported that a greater expression of STC1 in hepatocellular carcinoma (HCC) was significantly correlated with smaller tumor size. The underlying mechanism on the correlation is not known. In this study, using a metastatic HCC cell-line (MHCC-97L, P) and lentiviral vector mediated-STC1 overexpression, the inoculation of STC1-overexpressing MHCC-97L (S1) cells in a nude mice xenograft model demonstrated reductions in tumor mass and volume. As compared with P cells, S1 cells exhibited epithelial phenotype with significantly lower plating efficiency and reduced migratory and proliferative potential. Using coulter counter for cell-sizing, S1 cells (17.6 μm) were significantly smaller than P cells (19.6 μm). Western blot analysis revealed that S1 cells exhibited reduced expression level of phosphorylated ribosomal protein S6 (p-rpS6). Moreover, an inhibition of the upstream kinase p70S6K was evident with the dephosphorylation of Thr389 in the linker domain of the kinase. The inhibition of p70S6K/p-rpS6 pathway was accompanied with reduced cellular ATP level and increase of p-AMPK in S1 cells. Significantly lower rates of glycolysis and extracellular O2 consumption in S1 cells exhibited a lower cellular energy status. Since a faster rate of ATP production is essential to support cancer growth and metastasis, the present study identified the effect of STC1-overexpression on reducing energy metabolism, leading to an activation of AMPK pathway but an inhibition of p70S6K/p-rpS6 signaling to reduce tumor growth.
Short-Term Depression of Axonal Spikes at the Mouse Hippocampal Mossy Fibers and Sodium Channel-Dependent Modulation

Visual Abstract Axonal spike is an important upstream process of transmitter release, which directly impacts on release probability from the presynaptic terminals. Despite the functional significance, possible activity-dependent modulation of axonal spikes has not been studied extensively, partly due to inaccessibility of the small structures of axons for electrophysiological recordings. In this study, we tested the possibility of use-dependent changes in axonal spikes at the hippocampal mossy fibers, where direct recordings from the axon terminals are readily feasible. Hippocampal slices were made from mice of either sex, and loose-patch clamp recordings were obtained from the visually identified giant mossy fiber boutons located in the stratum lucidum of the CA3 region. Stimulation of the granule cell layer of the dentate gyrus elicited axonal spikes at the single bouton which occurred in all or none fashion. Unexpected from the digital nature of spike signaling, the peak amplitude of the second spikes in response to paired stimuli at a 50-ms interval was slightly but reproducibly smaller than the first spikes. Repetitive stimuli at 20 or 100 Hz also caused progressive use-dependent depression during the train. Notably, veratridine, an inhibitor of inactivation of sodium channels, significantly accelerated the depression with minimal effect on the initial spikes. These results suggest that sodium channels contribute to use-dependent depression of axonal spikes at the hippocampal mossy fibers, possibly by shaping the afterdepolarization (ADP) following axonal spikes. Prolonged depolarization during ADP may inactivate a fraction of sodium channels and thereby suppresses the subsequent spikes at the hippocampal mossy fibers.
The perilipin‐like PPE15 protein in Mycobacterium tuberculosis is required for triacylglycerol accumulation under dormancy‐inducing conditions

Mycobacterium tuberculosis (Mtb) causes latent tuberculosis infection in one‐third of the world population and remains quiescent in the human body for decades. The dormant pathogen accumulates lipid droplets containing triacylglycerol (TAG). In mammals, perilipin regulates lipid droplet homeostasis but no such protein has been identified in Mtb. We identified an Mtb protein (PPE15) that showed weak amino acid sequence identities with mammalian perilipin‐1 and was upregulated in Mtb dormancy. We generated a ppe15 gene‐disrupted mutant of Mtb and examined its ability to metabolically incorporate radiolabeled oleic acid into TAG, accumulate lipid droplets containing TAG and develop phenotypic tolerance to rifampicin in two in vitro models of dormancy including a three‐dimensional human granuloma model. The mutant showed a significant decrease in the biosynthesis and accumulation of lipid droplets containing TAG and in its tolerance of rifampicin. Complementation of the mutant with a wild‐type copy of the ppe15 gene restored the lost phenotypes. We designate PPE15 as mycobacterial perilipin‐1 (MPER1). Our findings suggest that the MPER1 protein plays a critical role in the homeostasis of TAG ‐containing lipid droplets in Mtb and influences the entry of the pathogen into a dormant state.
A generic diagnosis protocol for the monitoring of induction motors based on multiple statistical references in the torque-speed plane

This article introduces an original and generic monitoring protocol suitable to build robust references for the diagnosis of mechanical drives. In a general way, an efficient diagnosis scheme is related to the ability of properly separate healthy and faulty operations. However, during healthy working, the level of a fault indicator may significantly vary with the load characteristics or the system's operating point. Consequently, a threshold-based distinction between healthy and faulty operation may be blurred by operating point changes in the torque-speed plane. This issue is however little discussed in literature and most diagnosis schemes are designed for a system whose behaviour is well known and for specific operating conditions. An innovative diagnosis strategy is therefore presented in this article to overcome these limitations. It is based on two principles : an adequate segmentation of the torque-speed plane and the design of multiple statistical references. They are built during healthy conditions by means of statistical tools and enable an efficient diagnosis, independent of load and speed conditions. After a detailed description of this method, experimental results demonstrate its performance for the detection of a mechanical unbalance occurring in an electro-mechanical system, regardless of the operating conditions.
A hybird cascade H-bridge seven-level converter for active power filter

In this paper, a three-phase four-wire shunt active power filter (APF) is studied. In order to reduce voltage stress of power devices and improve the performance and practicality of APF in high voltage and capacity occasions, a hybrid cascade H-bridge seven-level converter is adopted as the main circuit of the APF. In system control, DC-link total voltage control is realized by transferring active power between AC and DC side. Meanwhile, a voltage distribution control method is employed which forcefully ensure the ratio of 1:2 between the two DC voltages of cascaded cells without any auxiliary circuit. Finally, simulation and experiment are implemented to verify the correctness of the theory and the results demonstrate an excellent compensation performance of the proposed APF.
Computer-animated stimuli to measure motion sensitivity: constraints on signal design in the Jacky dragon

Abstract Identifying perceptual thresholds is critical for understanding the mechanisms that underlie signal evolution. Using computer-animated stimuli, we examined visual speed sensitivity in the Jacky dragon Amphibolurus muricatus, a species that makes extensive use of rapid motor patterns in social communication. First, focal lizards were tested in discrimination trials using random-dot kinematograms displaying combinations of speed, coherence, and direction. Second, we measured subject lizards’ ability to predict the appearance of a secondary reinforcer (1 of 3 different computer-generated animations of invertebrates: cricket, spider, and mite) based on the direction of movement of a field of drifting dots by following a set of behavioural responses (e.g., orienting response, latency to respond) to our virtual stimuli. We found an effect of both speed and coherence, as well as an interaction between these 2 factors on the perception of moving stimuli. Overall, our results showed that Jacky dragons have acute sensitivity to high speeds. We then employed an optic flow analysis to match the performance to ecologically relevant motion. Our results suggest that the Jacky dragon visual system may have been shaped to detect fast motion. This pre-existing sensitivity may have constrained the evolution of conspecific displays. In contrast, Jacky dragons may have difficulty in detecting the movement of ambush predators, such as snakes and of some invertebrate prey. Our study also demonstrates the potential of the computer-animated stimuli technique for conducting nonintrusive tests to explore motion range and sensitivity in a visually mediated species.
The Chemistry of Plant–Microbe Interactions in the Rhizosphere and the Potential for Metabolomics to Reveal Signaling Related to Defense Priming and Induced Systemic Resistance

Plant roots communicate with microbes in a sophisticated manner through chemical communication within the rhizosphere, thereby leading to biofilm formation of beneficial microbes and, in the case of plant growth-promoting rhizomicrobes/-bacteria (PGPR), resulting in priming of defense, or induced resistance in the plant host. The knowledge of plant–plant and plant–microbe interactions have been greatly extended over recent years; however, the chemical communication leading to priming is far from being well understood. Furthermore, linkage between below- and above-ground plant physiological processes adds to the complexity. In metabolomics studies, the main aim is to profile and annotate all exo- and endo-metabolites in a biological system that drive and participate in physiological processes. Recent advances in this field has enabled researchers to analyze 100s of compounds in one sample over a short time period. Here, from a metabolomics viewpoint, we review the interactions within the rhizosphere and subsequent above-ground ‘signalomics’, and emphasize the contributions that mass spectrometric-based metabolomic approaches can bring to the study of plant-beneficial – and priming events.
Automated differentiation between meningioma and healthy brain tissue based on optical coherence tomography ex vivo images using texture features

Abstract. Brain tissue analysis is highly desired in neurosurgery, such as tumor resection. To guarantee best life quality afterward, exact navigation within the brain during the surgery is essential. So far, no method has been established that perfectly fulfills this need. Optical coherence tomography (OCT) is a promising three-dimensional imaging tool to support neurosurgical resections. We perform a preliminary study toward in vivo brain tumor removal assistance by investigating meningioma, healthy white, and healthy gray matter. For that purpose, we utilized a commercially available OCT device (Thorlabs Callisto) and measured eight samples of meningioma, three samples of healthy white, and two samples of healthy gray matter ex vivo directly after removal. Structural variations of different tissue types, especially meningioma, can already be seen in the raw OCT images. Nevertheless, an automated differentiation approach is desired, so that neurosurgical guidance can be delivered without a-priori knowledge of the surgeon. Therefore, we employ different algorithms to extract texture features and apply pattern recognition methods for their classification. With these postprocessing steps, an accuracy of nearly 98% was found.