Miracle-dz/UniFAR-FTUs huggingface dataset:
Repression of inflammatory responses in the absence of DNA binding by the glucocorticoid receptor

The glucocorticoid receptor (GR) acts both as a transcription factor itself on genes carrying GR response elements (GREs) and as a modulator of other transcription factors. Using mice with a mutation in the GR, which cannot activate GRE promoters, we examine whether the important anti‐inflammatory and immune suppressive functions of glucocorticoids (GCs) can be established in this in vivo animal model. We find that most actions are indeed exerted in the absence of the DNA‐binding ability of the GR: inhibition of the inflammatory response of locally irritated skin and of the systemic response to lipopolysaccharides. GCs repress the expression and release of numerous cytokines both in vivo and in isolated primary macrophages, thymocytes and CD4+ splenocytes. A transgenic reporter gene controlled by NF‐κB exclusively is also repressed, suggesting that protein– protein interaction with other transcription factors such as NF‐κB forms the basis of the anti‐inflammatory activity of GR. The only defect of immune suppression detected so far concerns the induced apoptosis of thymocytes and T lymphocytes.
General Medical and Specialty Mental Health Service Use for Major Depression

Objective: While major depression is common, many depressed persons receive, at best, inadequate treatment. A first step in remedying inadequate detection and treatment of major depression requires understanding the pathways into treatment—from situations of no care, to disease recognition, to referral and appropriate treatment—as well as identifying factors associated with movement between these several stages. Methods: Using the Epidemiologic Catchment Area sample, we identified factors associated with treatment in the general medical or mental health specialist section, or no treatment in a subsample of individuals with current major depression. Results: Strikingly, one-fourth of the sample received no services, over half received care in the general medical sector, and only one-fifth accessed a mental health specialist. Among those receiving any health services (general or mental), men and respondents reporting suicidal symptoms were at risk of receiving no care, while perceived poor health and a cluster of core depressive symptoms were associated with increased odds of service use (general or mental). Among respondents receiving general medical services, perceived poor health, core depressive symptoms, a history of depression, and comorbid mental conditions increased the odds of treatment in the specialty mental health sector. Conclusions: The findings emphasize the need for public health initiatives to 1) improve detection and movement into treatment among those at risk of receiving no care; and 2) insure that, once within the health care system, the processes of primary care treatment and specialty referrals conform to evidence-based treatment guidelines.
Evaluation of Performance of Several Established Pitch Detection Algorithms in Pathological Voices

Robust pitch estimation is important in many areas of speech processing. In voice pathology, diverse statistics extracted form pitch estimation were commonly used to test voice quality. In this study, we compared several established pitch detection algorithms (PDAs) for verification of adequacy of the PDAs. In the database of total pathological voices of 99 and normal voices of 30, an analysis of errors related with pitch detection was evaluated between pathological and normal voices, or among the types of pathological voices. Pitch errors of all PDAs used in this study more or less showed some changes between pathological and normal voices. According to the results of pitch errors, gross pitch error showed some increases in cases of pathological voices; especially excessive increase in PDA based on nonlinear time-series. In an analysis of types of pathological voices classified by aperiodicity and the degree of chaos, the more voice has aperiodic and chaotic, the more growth of pitch errors increased. Consequently, it is required to survey the severity of tested voice in order to obtain accurate pitch estimates.
Enhancement of Saporin Toxicity Against U937 Cells by Gypsophila Saponins

Saporin, a type I ribosome-inactivating protein (RIP), removes an adenine residue from the 28S ribosomal RNA as part of a process that leads to inhibition of protein synthesis. As a result, saporin has been shown to exert a strong toxicity in the immune system against macrophages. However, studies have shown that macrophage-like U937 cells are fully resistant against low concentrations of unmodified and his-tagged saporin solutions (6 pM) that normally kill macrophages and APC. In the studies reported here, we noted that with these cells, these RIP solutions only became highly cytotoxic when they were used in a combined treatment with Gypsophila saponins. We determined that this cytotoxicity was the result of an induction of apoptosis triggered by the now-internalized saporin molecules that had previously remained outside of these cells. The results here indicate that the Gypsophila saponins induce, in some manner yet to be fully defined, a stimulation of the endocytosis of saporin by these cells.
Vehicle Detection in High-Resolution Aerial Images via Sparse Representation and Superpixels

This paper presents a study of vehicle detection from high-resolution aerial images. In this paper, a superpixel segmentation method designed for aerial images is proposed to control the segmentation with a low breakage rate. To make the training and detection more efficient, we extract meaningful patches based on the centers of the segmented superpixels. After the segmentation, through a training sample selection iteration strategy that is based on the sparse representation, we obtain a complete and small training subset from the original entire training set. With the selected training subset, we obtain a dictionary with high discrimination ability for vehicle detection. During training and detection, the grids of histogram of oriented gradient descriptor are used for feature extraction. To further improve the training and detection efficiency, a method is proposed for the defined main direction estimation of each patch. By rotating each patch to its main direction, we give the patches consistent directions. Comprehensive analyses and comparisons on two data sets illustrate the satisfactory performance of the proposed algorithm.
An introduction to the Barell body region by nature of injury diagnosis matrix

Introduction: The Barell body region by nature of injury diagnosis matrix standardizes data selection and reports, using a two dimensional array (matrix) that includes all International Classification of Diseases (ICD)-9-CM codes describing trauma. Aim: To provide a standard format for reports from trauma registries, hospital discharge data systems, emergency department data systems, or other sources of non-fatal injury data. This tool could also be used to characterize the patterns of injury using a manageable number of clinically meaningful diagnostic categories and to serve as a standard for casemix comparison across time and place. Concept: The matrix displays 12 nature of injury columns and 36 body region rows placing each ICD-9-CM code in the range from 800 to 995 in a unique cell location in the matrix. Each cell includes the codes associated with a given injury. The matrix rows and columns can easily be collapsed to get broader groupings or expanded if more specific sites are required. The current matrix offers three standard levels of detail through predefined collapsing of body regions from 36 rows to nine rows to five rows. Matrix development: This paper presents stages in the development and the major concepts and properties of the matrix, using data from the Israeli national trauma registry, and from the US National Hospital Discharge Survey. The matrix introduces new ideas such as the separation of traumatic brain injury (TBI), into three types. Injuries to the eye have been separated from other facial injuries. Other head injuries such as open wounds and burns were categorized separately. Injuries to the spinal cord and spinal column were also separated as are the abdomen and pelvis. Extremities have been divided into upper and lower with a further subdivision into more specific regions. Hip fractures were separated from other lower extremity fractures. Forthcoming developments: The matrix will be used for the development of standard methods for the analysis of multiple injuries and the creation of patient injury profiles. To meet the growing use of ICD-10 and to be applicable to a wider range of countries, the matrix will be translated to ICD-10 and eventually to ICD-10-CM. Conclusion: The Barell injury diagnosis matrix has the potential to serve as a basic tool in epidemiological and clinical analyses of injury data.
Coordinated optimization control method of transmission and distribution network

Due to a large number of distributed generators and controllable devices approached to distribution network, the traditional optimization control method, which separates the transmission and the distribution system, is not applicable. This paper presented a voltage optimization method combining transmission and distribution networks. The method considered the differences between transmission network and distribution network in the control means. Established a single phase reactive power optimization model to the transmission system, which can be solved by the primal dual interior point algorithm rapidly, and three-phase reactive power optimization model to the distribution network, whose exact solution can be got by the semi-definite programming theory. By the iteration of the power and the voltage at the boundary between the both networks, the reactive power and voltage of the whole network can reach the optimal state. The results of simulation proved that the method can make full use of all controllable resources, and realize the coordinated control of voltage and reactive power in the whole system.
Differentiation of Mycobacterium bovis isolates from animals by DNA typing

The insertion sequence IS6110 and the direct repeat (DR) specific to tuberculosis complex mycobacteria and the highly repeated DNA sequence, the polymorphic GC-rich repeat sequence (PGRS), were systematically used to identify restriction fragment length polymorphisms (RFLPs) within 210 isolates of Mycobacterium bovis. The isolates were primarily of bovine origin, but isolates from badgers, feral deer, sheep, humans, and a pig were included. The RFLP probes IS6110, DR, and PGRS individually identified 17, 18, and 18 different RFLP types, respectively, but in combination these probes identified a total of 39 different M. bovis RFLP types. The recommendations (J. D. A. van Embden, M. D. Cave, J. T. Crawford, J. W. Dale, K. D. Eisenach, B. Gicquel, P. W. M. Hermans, C. Martin, R. McAdam, T. M. Shinnick, and P. M. Small, J. Clin. Microbiol. 31:406-409, 1993) for a standardized RFLP analysis for M. tuberculosis were adapted to facilitate gel documentation, image analysis, and construction of a database of RFLP types. In the present study the same M. bovis RFLP types were evident in the various animal species included, indicating that the strains were not host restricted. Application of these techniques to defined field studies should help elucidate more accurately aspects of the epidemiology of bovine tuberculosis in different countries.
Hodgkin Reed–Sternberg cells express 15‐lipoxygenase‐1 and are putative producers of eoxins in vivo

Classical Hodgkin lymphoma has unique clinical and pathological features and tumour tissue is characterized by a minority of malignant Hodgkin Reed–Sternberg cells surrounded by inflammatory cells. In the present study, we report that the Hodgkin lymphoma‐derived cell line L1236 has high expression of 15‐lipoxygenase‐1 and that these cells readily convert arachidonic acid to eoxin C4, eoxin D4 and eoxin E4. These mediators were only recently discovered in human eosinophils and mast cells and found to be potent proinflammatory mediators. Western blot and immunocytochemistry analyses of L1236 cells demonstrated that 15‐lipoxygenase‐1 was present mainly in the cytosol and that the enzyme translocated to the membrane upon calcium challenge. By immunohistochemistry of Hodgkin lymphoma tumour tissue, 15‐lipoxygenase‐1 was found to be expressed in primary Hodgkin Reed–Sternberg cells in 17 of 20 (85%) investigated biopsies. The enzyme 15‐lipoxygenase‐1, however, was not expressed in any of 10 biopsies representing nine different subtypes of non‐Hodgkin lymphoma. In essence, the expression of 15‐lipoxygenase‐1 and the putative formation of eoxins by Hodgkin Reed–Sternberg cells in vivo are likely to contribute to the inflammatory features of Hodgkin lymphoma. These findings may have important diagnostic and therapeutic implications in Hodgkin lymphoma. Furthermore, the discovery of the high 15‐lipoxygenase‐1 activity in L1236 cells demonstrates that this cell line comprises a useful model system to study the chemical and biological roles of 15‐lipoxygenase‐1.
Clinical decision rules for children with minor head injury: a systematic review

Introduction Clinical decision rules aid clinicians with the management of head injured patients. This study aimed to identify clinical decision rules for children with minor head injury and compare their diagnostic accuracy for detection of intracranial injury (ICI) and injury requiring neurosurgical intervention (NSI). Methods Relevant studies were identified by an electronic search of key databases. Papers in English were included with a cohort of at least 20 children suffering minor head injury (GCS 13–15). Studies of a decision rule derived to identify patients at risk of ICI or NSI had to include a proportion of the cohort undergoing imaging. Study quality was assessed using the QUADAS checklist. Results 16 publications, representing 14 cohorts, with 79 740 patients were included. Only four rules were tested in more than one cohort. Of the validated rules the paediatric emergency care applied research network (PECARN) rule was most consistent (sensitivity 98%; specificity 58%). For neurosurgical injury all had high sensitivity (98–100%) but the children's head injury algorithm for the prediction of important clinical events (CHALICE) rule had the highest specificity (86%) in its derivation cohort. Conclusion Of the current decision rules for minor head injury the PECARN rule appears the best for children and infants, with the largest cohort, highest sensitivity and acceptable specificity for clinically significant ICI. Application of this rule in the UK would probably result in an unacceptably high rate of CT scans per injury, and continued use of the CHALICE-based NICE guidelines represents an appropriate alternative.
Deep-sea image enhancement using multi-scale retinex with reverse color loss for autonomous underwater vehicles

Advances on underwater optical imaging has been rampant recently because of numerous applications it offers and the increasing use of underwater vehicles. Unfortunately, due to the inherent property of light in water, images tend to be hazy, have non-uniform illumination and colors get distorted. Retinex algorithms were formulated for dynamic range compression and tonal rendition to fix the illumination and color distortion problem. Multi-scale Retinex, an extension of the original Retinex algorithm, has been proven to enhance images. However, Retinex Theory is based on human visual system in air medium. Due to this, light attenuation is not considered. Through Beer-Lambert Law, the light attenuation percentage can be estimated and added back to the original image in a process the researchers call Reverse Color Loss. Thus, combining Multi-scale Retinex and Reverse Color Loss, an enhancement algorithm for deep-sea application for the use of AUVs is proposed.
Indices Used in Differentiation of Thalassemia Trait from Iron Deficiency Anemia in Pediatric Population: Are They Reliable?

Background: Iron deficiency (IDA) and beta thalassemia trait (TT) are the most common causes of hypochromia and microcytosis. Many indices have been defined to quickly discriminate these similar entities via parameters obtained from automated blood cell analyzers. However, studies in the pediatric age group are scarce and their results are controversial. Methods: We calculated eight discrimination indices [Mentzer Index (MI), England and Fraser Index (E&F), Srivastava Index (S), Green and King Index (G&K), Shine and Lal Index (S&L), red blood cell (RBC) count, RBC distribution width, and red blood cell distribution width Index (RDWI)] in 100 patients. We calculated sensitivity (SENS), specificity (SPEC), positive and negative predictive value (PPV and NPV), and Youden's Index (YI) of each discrimination index. Results: None of the discrimination indices showed a SENS and SPEC of 100%. The highest SENS was obtained with S&L (87.1%), while the highest SPEC was obtained with E&F formula (100%). The highest YI value was obtained with E&F formula (58.1%). Conclusion: In our study, none of the formulas appears reliable in discriminating between TT and IDA patients. The evaluation of iron status and measurement of hemoglobin A2 (HbA2) remain the most reliable investigations to differentiate between TT and IDA patients.
Morbidity and mortality rates in a NOVA SCOTIA First Nations Community, 1996-1999.

BACKGROUND Despite an abundance of data and analysis of First Nations morbidity and mortality rates, accurate data have not been available to serve the First Nations community in Eastern Canada. METHODS Data for Eskasoni, the largest Mi'kmaq community, were obtained for 1996 through 1999 and Cape Breton and Nova Scotia were used as regional and provincial reference populations respectively. Age-adjusted relative risks (AARR) were calculated for overall mortality and disease-specific hospital admissions. RESULTS Eskasoni's mortality AARR was greater than 1.0 in 3 of the 4 years studied, although the data may understate Eskasoni's mortality rates. Eskasoni's total admission AARRs were significantly greater than the two reference populations. Neoplasm admission rates were generally lower, while circulatory disease admission AARRs were significantly higher. A rise in diabetic admission rates was noted with the AARR reaching statistical significance in the final years of the study. Respiratory disease was the leading cause of hospitalization with significantly greater rates of admission than regional or provincial rates. Pneumonia and influenza accounted for more than one half of respiratory admissions. Infectious disease admissions were more prevalent in Eskasoni while rates of liver disease were generally low. CONCLUSION Results suggest that members of the largest Mi'kmaq band are at greater risk for a number of disease categories and health promotion should be targeted toward respiratory ailments, circulatory disease and diabetic management. Further analysis, however, remains an important priority.
Light microscopic immunocytochemical study of fibrous sheath and outer dense fiber formation in the rat spermatid

The formation of the fibrous sheath (FS) and outer dense fibers (ODF), two major cytoskeletal components of the tail of spermatozoa, was analyzed in the seminiferous epithelium by immunoperoxidase techniques applied to paraffin‐embedded testicular sections. Antibodies were prepared from purified FS and ODF fractions and from major 75 and 14.4 kDa FS polypeptides and major 32‐26 14.4 kDa ODF polypeptides. The immunostaining results showed that the production of FS and ODF proteins appeared to be exclusive to step 9‐19 spermatids and lasted over the duration of a full cycle of the seminiferous epithelium, or 12.8 days. During this period there was seemingly an initial lag of short duration between the synthesis and assembly of FS and ODF proteins followed by a long process of coordinated activity. Peak cytoplasmic immunoreactivity was reached in step 15 for FS proteins and midstep 16 for ODF proteins and and remained elevated thereafter for approximately 80 hr for both FS and ODF proteins. The immunoreactivity was more uniform and diffused for FS proteins and granulated or clumpy for ODF proteins. Assembly of FS proteins along the axoneme proceeded in a distal to proximal direction while for ODF proteins assembly proceeded in a proximal to distal direction. The main route of elimination of residual cytoplasmic FS and ODF proteins appeared to take place through the cytoplasmic droplets and residual bodies, respectively. There appeared to be no variation in step reactivity between the major ODF polypeptides tested and only minor variation in step reactivity between the major FS polypeptides tested. However, although the 14.4 kDa polypeptides of FS and ODF share antigenic determinants, they do not appear to be identical, because they presented different immunolocalizations during spermiogenesis and different directions of assembly along the axoneme.
A randomized controlled clinical trial of edentulous patients treated with immediately loaded implant-supported mandibular fixed prostheses.

PURPOSE A 1-year blinded two-arm parallel randomized controlled clinical trial was conducted to test the null hypothesis that immediate loading of four dental implants between the mental foramina with a fixed prosthesis has no benefits compared with the conventional loading technique in terms of implant success and clinical function. MATERIALS AND METHODS Forty-five patients, completely edentulous in the mandibles seeking implant-supported prostheses at the Faculty of Dentistry, University of Toronto, were recruited. Four TiUnite dental implants (NobelBiocare®, Göteborg, Sweden) were placed following the one-stage surgical protocol. Immediately after surgery, the patients were randomly assigned to either study arms by a third independent party. In the experimental arm (EA), existing mandibular denture was converted into an interim implant-supported fixed bridge (ISFB) on the same day of surgery. In the control arm (CA), the mandibular denture was hollowed out and relined with a soft tissue reline. The implants were loaded with the permanent ISFB at least 3 months postsurgery. Patients were assessed by a calibrated independent investigator at 2, 6, and 12 months following completion of treatment. RESULTS A total of one hundred sixty implants were placed. Due to anatomical limitations, one patient was excluded from the study. Four patients in the EA did not receive intervention as allocated and were transferred to the CA. Implant success rate was comparable between the two arms and exceeded 96%. Marginal bone loss was statistically significantly more in the immediate loading arm, -0.296 mm versus -0.037 mm (intention to treat: p = .002; per protocol: p = .021). The relatively early intervention and insertion of the final prosthesis in the immediate arm, when bone healing and remodeling process had not yet been completed, might explain the difference in the amount of bone loss. CONCLUSION Immediate loading of four dental implants with a fixed prosthesis in the edentulous mandible is a feasible treatment option and leads to a substantial improvement in perceived oral health status.