Miracle-dz/UniFAR-FTUs huggingface dataset:
Algorithms for large-scale internet measurements

As the Internet has grown in size and importance to society, it has become increasingly difficult to generate global metrics of interest that can be used to verify proposed algorithms or monitor performance. This dissertation tackles the problem by proposing several novel algorithms designed to perform Internet-wide measurements using existing or inexpensive resources. We initially address distance estimation in the Internet, which is used by many distributed applications. We propose a new end-to-end measurement framework called Turbo King (T-King) that uses the existing DNS infrastructure and, when compared to its predecessor King, obtains delay samples without bias in the presence of distant authoritative servers and forwarders, consumes half the bandwidth, and reduces the impact on caches at remote servers by several orders of magnitude. Motivated by recent interest in the literature and our need to find remote DNS nameservers, we next address Internet-wide service discovery by developing IRLscanner, whose main design objectives have been to maximize politeness at remote networks, allow scanning rates that achieve coverage of the Internet in minutes/hours (rather than weeks/months), and significantly reduce administrator complaints. Using IRLscanner and 24-hour scan durations, we perform 20 Internet-wide experiments using 6 different protocols (i.e., DNS, HTTP, SMTP, EPMAP, ICMP and UDP ECHO). We analyze the feedback generated and suggest novel approaches for reducing the amount of blowback during similar studies, which should enable researchers to collect valuable experimental data in the future with significantly fewer hurdles. We finally turn our attention to Intrusion Detection Systems (IDS), which are often tasked with detecting scans and preventing them; however, it is currently unknown how likely an IDS is to detect a given Internet-wide scan pattern and whether there exist sufficiently fast stealth techniques that can remain virtually undetectable at large-scale. To address these questions, we propose a novel model for the window-expiration rules of popular IDS tools (i.e., Snort and Bro), derive the probability that existing scan patterns (i.e., uniform and sequential) are detected by each of these tools, and prove the existence of stealth-optimal patterns.
A Robust Salient Region Extraction Based on Color and Texture Features

— In current common research reports, salient regions are usually defined as those regions that could present the main meaningful or semantic contents. However, there are no uniform saliency metrics that could describe the saliency of implicit image regions. Most common metrics take those regions as salient regions, which have many abrupt changes or some unpredictable characteristics. But, this metric will fail to detect those salient useful regions with flat textures. In fact, according to human semantic perceptions, color and texture distinctions are the main characteristics that could distinct different regions. Thus, we present a novel saliency metric coupled with color and texture features, and its corresponding salient region extraction methods. In order to evaluate the corresponding saliency values of implicit regions in one image, three main colors and multi-resolution Gabor features are respectively used for color and texture features. For each region, its saliency value is actually to evaluate the total sum of its Euclidean distances for other regions in the color and texture spaces. A special synthesized image and several practical images with main salient regions are used to evaluate the performance of the proposed saliency metric and other several common metrics, i.e., scale saliency, wavelet transform modulus maxima point density, and important index based metrics. Experiment results verified that the proposed saliency metric could achieve more robust performance than those common saliency metrics.
Characterization of a de novo balanced t(4;20)(q33;q12) translocation in a patient with mental retardation

CHD6 is an ATP‐dependent chromatin‐remodeling enzyme, which has been implicated as a crucial component for maintaining and regulating chromatin structure. CHD6 belongs to the largest subfamily, subfamily III (CHD6–9), of the chromodomain helicase DNA (CHD‐binding protein) family of enzymes (CHD1–9). Here we report on a female patient with a balanced translocation t(4;20)(q33;q12) presenting with severe mental retardation and brachydactyly of the toes. We identified the translocation breakpoint in intron 27 of CHD6 at 20q12, while the 4q33 breakpoint was intergenic. Northern blot analysis demonstrated the CHD6 mRNA in the patient's lymphoblastoid cells was decreased to ∼50% of the control cells. To investigate the cellular mechanism of diseases resulting from decreased CHD subfamily III proteins, we knocked down CHD6 or CHD7 by RNA interference in HeLa cells and analyzed chromosome alignment. The both CHD6‐ and CHD7‐knockdown cells showed increased frequency of misaligned chromosomes on metaphase plates. Moreover, an elevated frequency of aneuploidy, the major cause of miscarriages and mental retardation, was observed in patients with CHD6 and CHD7 haploinsufficiency. These results suggest that CHD6 and CHD7 play important roles in chromatin assembly during mitosis and that mitotic delay and/or impaired cell proliferation may be associated with pathogenesis of the diseases caused by CHD6 or CHD7 mutations. © 2010 Wiley‐Liss, Inc.
Detection of Topic Change in IRC Chat Logs

We attack the problem of topic segmentation in the domain of Internet Relay Chat logs. In this process, we examine the previous work in text segmentation using a variety of methods. After considering the pros and cons of the methods, we employ Text Tiling, pause detection, and latent semantic analysis because they did not require the usage of large pre-tagged corpora. With these systems in place, we consider the properties and problems that exist when considering the domain of internet chat. To this end, we examine our re-sults and show them to be fair at best.
MayAnd at SemEval-2016 Task 5: Syntactic and word2vec-based approach to aspect-based polarity detection in Russian

This paper describes aspect-based polarity detection system for Russian, used in aspectbased sentiment analysis task (ABSA) of SemEval-2016 (Task 5, subtask 1, slot 3). The system consists of two independent classifiers: for opinion target expressions and for implicit opinion target mentions. We introduce a set of standard unigram features together with more sophisticated ones: based on sentence syntactic structure and based on lemmas vector representation. Being applied to Russian restaurant reviews, our system achieved best quality among four participants.
fMRI and Brain Activation after Sport Concussion: A Tale of Two Cases

Sport-related concussions are now recognized as a major public health concern: the number of participants in sport and recreation is growing, possibly playing their games faster, and there is heightened public awareness of injuries to some high-profile athletes. However, many clinicians still rely on subjective symptom reports for the clinical determination of recovery. Relying on subjective symptom reports can be problematic, as it has been shown that some concussed athletes may downplay their symptoms. The use of neuropsychological (NP) testing has enabled clinicians to measure the effects and extent of impairment following concussion more precisely, providing more objective metrics for determining recovery. Nevertheless, there is a remaining concern that brain abnormalities may exist beyond the point at which individuals achieve recovery in self-reported symptoms and cognition measured by NP testing. Our understanding of brain recovery after concussion is important, not only from a neuroscience perspective, but also from the perspective of clinical decision-making for safe return-to-play. A number of advanced neuroimaging tools, including blood oxygen level dependent functional magnetic resonance imaging (fMRI), have independently yielded early information on abnormal brain functioning. In the two cases presented in this article, we report contrasting brain activation patterns and recovery profiles using fMRI. Importantly, fMRI was conducted using adapted versions of the most sensitive computerized NP tests administered in our current clinical practice to determine impairments and recovery after sport-related concussion. One of the cases is consistent with the concept of lagging brain recovery.
Recent progress in reproduction of whale oocytes

Summary Whale oocytes recovered from follicles can be matured in vitro. Whale sperm and mature oocytes can be used for in vitro fertilization (IVF), and IVF embryos have the ability to develop to morula stage. Whale sperm injected into bovine or mouse oocytes can activate the oocytes and form pronucleus. Interspecies somatic cell nuclear transfer embryos have been reconstructed with whale somatic cell nucleus and enucleated bovine or porcine oocytes, and interspecies cloned embryos can develop in vitro. This paper reviews recent progress in maturation, fertilization and development of whale oocytes.
Knowledge and observations in the situation calculus

We present a powerful new account of multiagent knowledge in the situation calculus and an effective reasoning procedure for handling knowledge queries. Our approach generalizes existing work by reifying the observations made by each agent as the world evolves, allowing for agents that are partially or completely unaware of some of the actions that have occurred. This also enables agents to reason effectively about knowledge using only their internal history of observations, rather than requiring a full history of the world. The result is a more robust and flexible account of knowledge suitable for use in partially-observable multiagent domains.
Cost estimation of Advance Reservations over Queued jobs: a Quantitative Study

A grid is a geographically distributed resource sharing environment across multiple organizations. The most typical grid resources are clusters with high performance/cost ratio. In general, these clusters are shared as non-dedicated grid resources since local users may run their jobs simultaneously. Local jobs are usually queued and processed in a batch mode with uncertain waiting time, while grid jobs always require advance reservations with guaranteed resource allocation. In this paper, we provide quantitative analysis on the impact of advance reservations over queued jobs, in terms of job waiting time and resource utilization, respectively. It is observed that advance reservations will lead to longer job waiting time and lower resource utilization. That is to say, advance reservations should cost more than queued jobs. In this work, based on quantitative experimental results, an empirical formula for cost estimation of advance reservations over queued jobs is presented. It is suggested that compared with queued jobs, advance reservations should be doubly charged to compensate resource utilization loss. If the notice time of an advance reservation is short below a threshold, additional cost should be applied further since queue waiting time is increased.
Application of Computational Intelligence Method in Petroleum geomechanics Characterization

Petroleum geomechanics characterization refers to the process of quantitatively assigning geomechanical parameters using all available field data. In this paper, an attempt is made to develop a computational intelligence method that integrates genetic algorithm (GA) and artificial neural network (ANN). Through this method, these geomechanical parameters such as horizontal in situ stresses, fracture aperture and joint spacing are determined based on the borehole displacements during drilling well. In the hybrid ANN–GA model, GA can automatically identify geomechanical parameters as neural inputs from monitored borehole displacements, and the ANN is trained to learn the complex relationship between geomechanical parameters and target borehole displacements. Data from numerical experiments on petroleum wells are used in verification of the proposed computational intelligence method for geomechanics characterization. The study of numerical experiment illustrates that the proposed computational intelligence method has the ability to generate reliable results.
Coolcams: power-efficient TCAMs for forwarding engines

Ternary content-addressable memories (TCAMs) are becoming very popular for designing high-throughput forwarding engines on routers: they are fast, cost-effective and simple to manage. However, a major drawback of TCAMs is their high power consumption. This paper presents architectures and algorithms for making TCAM-based routing tables more power efficient. The proposed architectures and algorithms are simple to implement, use commodity TCAMs, and provide worst-case power consumption guarantees (independent of routing table contents).
On the limit of superhydrophobicity: defining the minimum amount of TiO2 nanoparticle coating

Fabrication of superhydrophobic surfaces in large scale has been in high interest for several years, also titanium oxide nanostructures having been applied for the purpose. Optimizing the amount and structure of the TiO2 material in the coating will play a key role when considering upscaling. Here, we take a look at fabricating the superhydrophobic surface in a one-step roll-to-roll pilot scale process by depositing TiO2 nanoparticles from a Liquid Flame Spray onto a moving paperboard substrate. In order to find the minimum amount of nanomaterial still sufficient for creating superhydrophobicity, we varied nanoparticle production rate, flame distance from the substrate and line speed. Since the deposited amount of material sideways from the flame path was seen to decrease gradually, spatial analysis enabled us to consistently determine the minimum amount of TiO2 nanoparticles on the substrate needed to achieve superhydrophobicity. Amount as low as 20–30 mg m−2 of TiO2 nanoparticles was observed to be sufficient. The scanning electron microscopy revealed that at this amount, the surface was covered with nanoparticles only partially, but still sufficiently to create a hierarchical structure to affect wetting significantly. Based on XPS analysis, it became apparent that TiO2 gathers hydrocarbons on the surface to develop the surface chemistry towards hydrophobic, but below the critical amount of TiO2 nanoparticles, the chemistry could not enable superhydrophobicity anymore. While varying the deposited amount of TiO2, besides the local spatial variance of the coating amount, also the overall yield was studied. Within the text matrix, a yield up to 44% was achieved. In conclusion, superhydrophobicity was achieved at all tested line speeds (50 to 300 m min−1), even if the amount of TiO2 varied significantly (20 to 230 mg m−2).
An improvement of fraisse's sufficient condition for hamiltonian graphs

Let G be a k-connected graph of order n. For an independent set c, let d(S) be the number of vertices adjacent to at least one vertex of S and > let i(S) be the number of vertices adjacent to at least |S| vertices of S. We prove that if there exists some s, 1 ≤ s ≤ k, such that ΣxiEX d(X\{Xi}) > s(n−1) – k[s/2] – i(X)[(s−1)/2] holds for every independetn set X ={x0, x1 xs} of s + 1 vertices, then G is hamiltonian. Several known results, including Fraisse's sufficient condition for hamiltonian graphs, are dervied as corollaries.
Epidemiology and Outcome of Acute Kidney Injury According to Pediatric Risk, Injury, Failure, Loss, End-Stage Renal Disease and Kidney Disease: Improving Global Outcomes Criteria in Critically Ill Children—A Prospective Study*

Objective: We aimed to investigate the epidemiology, risk factors, and short- and medium-term outcome of acute kidney injury classified according to pediatric Risk, Injury, Failure, Loss, End-Stage Renal Disease, and Kidney Disease: Improving Global Outcomes criteria in critically ill children. Design: Prospective observational cohort study. Setting: Two eight-bed PICUs of a tertiary-care university hospital. Patients: A heterogeneous population of critically ill children. Interventions: None. Measurements and Main Results: Demographic, clinical, laboratory, and outcome data were collected on all patients admitted to the PICUs from August 2011 to January 2012, with at least 24 hours of PICU stay. Of the 214 consecutive admissions, 160 were analyzed. The prevalence of acute kidney injury according to pediatric Risk, Injury, Failure, Loss, End-Stage Renal Disease and Kidney Disease: Improving Global Outcomes criteria was 49.4% vs. 46.2%, respectively. A larger proportion of acute kidney injury episodes was categorized as Kidney Disease: Improving Global Outcomes stage 3 (50%) compared with pediatric Risk, Injury, Failure, Loss, End-Stage Renal Disease F (39.2%). Inotropic score greater than 10 was a risk factor for acute kidney injury severity. About 35% of patients with acute kidney injury who survived were discharged from the PICU with an estimated creatinine clearance less than 75 mL/min/1.73 m2 and one persisted with altered renal function 6 months after PICU discharge. Age 12 months old or younger was a risk factor for estimated creatinine clearance less than 75 mL/min/1.73 m2 at PICU discharge. Acute kidney injury and its severity were associated with increased PICU length of stay and longer duration of mechanical ventilation. Eleven patients died; nine had acute kidney injury (p < 0.05). The only risk factor associated with death after multivariate adjustment was Pediatric Risk of Mortality score greater than or equal to 10. Conclusions: Acute kidney injury defined by both pediatric Risk, Injury, Failure, Loss, End-Stage Renal Disease and Kidney Disease: Improving Global Outcomes criteria was associated with increased morbidity and mortality, and may lead to long-term renal dysfunction.
Electrochemical performances and volume variation of nano-textured silicon thin films as anodes for lithium-ion batteries

Electrochemical behaviors of nano-textured silicon thin film (NTSTF) coated with Al2O3 or Cu layers as anodes for lithium-ion batteries have been investigated. The cyclic performance of NTSTF electrodes is superior to dense Si thin films. The NTSTF with a 5 nm thick Cu coating layer shows superior cyclic performance and rate performance to other NTSTF samples. The volume changes of NTSTF electrodes after the first cycle and the tenth cycle have been investigated. This series of electrodes shows an anisotropic volume variation: the height does not change but the diameter does expand. This finding shows the feasibility of dealing with the vertical expansion and contraction of Si-based powder electrodes in Li-ion batteries.
Central ventilatory and cardiovascular actions of trout gastrin-releasing peptide (GRP) in the unanesthetized trout

Summary Gastrin-releasing peptide (GRP), a neuropeptide initially isolated from porcine stomach, shares sequence similarity with bombesin. GRP and its receptors are present in the brains and peripheral tissues of several species of teleost fish, but little is known about the ventilatory and cardiovascular effects of this peptide in these vertebrates. The goal of this study was to compare the central and peripheral actions of picomolar doses of trout GRP on ventilatory and cardiovascular variables in the unanesthetized rainbow trout. Compared to vehicle, intracerebroventricular (ICV) injection of GRP (1–50 pmol) significantly elevated the ventilation rate (ƒV) and the ventilation amplitude (VAMP), and consequently the total ventilation (VTOT). The maximum hyperventilatory effect of GRP (VTOT: +225%), observed at a dose of 50 pmol, was mostly due to its stimulatory action on VAMP (+170%) rather than ƒV (+20%). In addition, ICV GRP (50 pmol) produced a significant increase in mean dorsal aortic blood pressure (PDA) (+35%) and in heart rate (ƒH) (+25%). Intra-arterial injections of GRP (5–100 pmol) were without sustained effect on the ventilatory variables but produced sporadic and transient increases in ventilatory movement at doses of 50 and 100 pmol. At these doses, GRP elevated PDA by +20% but only the 50 pmol dose significantly increased HR (+15%). In conclusion, our study suggests that endogenous GRP within the brain of the trout may act as a potent neurotransmitter and/or neuromodulator in the regulation of cardio-ventilatory functions. In the periphery, endogenous GRP may act as locally-acting and/or circulating neurohormone with an involvement in vasoregulatory mechanisms.
Functional and anatomical characterization of brown adipose tissue in heart failure with blood oxygen level dependent magnetic resonance

Recent studies have suggested that brown adipose tissue (BAT) plays an important role in obesity, insulin resistance and heart failure. The characterization of BAT in vivo, however, has been challenging. No technique to comprehensively image BAT anatomy and function has been described. Moreover, the impact on BAT of the neuroendocrine activation seen in heart failure has only recently begun to be evaluated in vivo. The aim of this study was to use MRI to characterize the impact of heart failure on the morphology and function of BAT.
Remodelling of the respiratory network in a mouse model of Rett syndrome depends on brain‐derived neurotrophic factor regulated slow calcium buffering

Rett syndrome caused by MeCP2 mutations is a devastating neurodevelopmental disorder accompanied by severe breathing irregularities. Using transduction of organotypic slices from model MeCP2–/y mice with neuron‐specific calcium sensor protein D3cpv, we examined the slow calcium buffering in neurons in pre‐Bötzinger complex (preBötC), a component of the complex respiratory network. Examination of wild‐type (WT) and MeCP2 null mice showed clear differences in the spatial organisations of neurons in preBötC and also in the disturbances in calcium homeostasis in mutant mice during early postnatal development. Deregulated calcium buffering in MeCP2–/y neurons was indicated by increased amplitude and kinetics of depolarisation‐induced calcium transients. Both effects were related to an insufficient calcium uptake into the endoplasmic reticulum that was restored after pretreatment with brain‐derived neurotrophic factor (BNDF). Conversely, the inhibition of BDNF signalling in WT neurons produced disturbances similar to those observed in MeCP2–/y mice. Brief hypoxia and calcium release from internal stores induced global calcium increases, after which the processes of many MeCP2–/y neurons were retracted, an effect that was also corrected by pretreatment with BDNF. The data obtained point to a tight connection between calcium homeostasis and long‐term changes in neuronal connectivity. We therefore propose that calcium‐dependent retraction of neurites in preBötC neurons can cause remodelling of the neuronal network during development and set up the conditions for appearance of breathing irregularities in Rett model mice.