Miracle-dz/UniFAR-FTUs huggingface dataset:
Does a CBIR system really impact decisions of physicians in a clinical environment?

Content-based image retrieval systems are employed in several areas. One of the most prominent area is the medical field, due to the huge volume of digital images daily generated in healthcare institutions employed for decision making. There are several works applying CBIR techniques over medical images. However, the great majority of them do not verify whether the systems are actually considered by the specialists as a pontential aid in a real environment. In order to fill this research void in the literature, this work explores user experiments in a CBIR system involving resident physicians and radiologists. To do so, we developed a CBIR system according to requirements provided by the specialists and employed a methodology to analyze the effectiveness of the system for supporting them in clinical routine. The methodology aims at evaluating the system's impact in the user's decision, inquiring the specialists about the image classification and their degree of certainty in different situations using the system. By analyzing the obtained results we can argue that the proposed methodology joined with our medical CBIR system presented a high acceptance and viability rate regarding the radiologists interests in the clinical practice domain, providing a novel approach to analyze CBIR systems under realistic conditions.
Isotopic ages of selected magmatic rocks from King George Island (West Antarctica ) controlled by magnetostratigraphy

Isotopic and palaeomagnetic studies were carried out in the central part of King George Island. Selected mafic to intermediate igneous rocks were sampled for this purpose. Single-grain U-Pb dating of zircons from basalts to dacites was controlled by a whole rock 40Ar-39Ar data and the magnetostratigraphy. Five magmatic activity phases were distinguished in the SE coast of King George Island. The oldest, late Cretaceous (Campanian) phase represented by basalts of the Uchatka Point Formation are followed by the early to middle Eocene (~53–43 Ma) phase documented by the lava flows whose ages decrease from SW to NE. Next younger magmatic activity phases were recorded by the lava flows or vertical intrusions emplaced in the late Eocene (~37–35 Ma), late Oligocene (~28–25 Ma) and late Pliocene to Holocene. The early to middle Eocene magmatic activity phase was the most extensive, producing the largest volume of magma in the study area. The new age determinations allow a more precise and credible stratigraphic correlation of the interbeds of sedimentary rocks observed in some places within the magmatic succession. The glacial provenance of the Hervľ Cove diamictite is not obvious. It might represent a mountain river environment. Intense volcanic activity could be additional factor modelling the climate conditions of Antarctica in Paleogene
Evaluation of near-surface soil water status through the inversion of soil–canopy radiative transfer models in the reflective optical domain

Knowledge of the spatial and temporal variability of surface soil water content (SWC) is important to understand the linkage between hydrological, ecological and geological processes in a region. Optical Earth observation (EO) data offer the possibility to retrieve surface soil water information, since an overall decrease of soil reflectance corresponds to increasing SWC. Sensitivity analysis of the combined leaf (PROSPECT) and canopy (SAILH) reflectance models (PROSAIL) to soil reflectance variations was carried out, and remote sensing and ground data from different experimental agricultural sites (ESA Spectra Barrax Campaigns (SPARC) 2004, ESA Airborne SAR and Optic Campaigns (AgriSAR) 2006 and participatory multi-level EO-assisted tools for irrigation water management and agricultural decision-support (PLEIADeS) 2007) were exploited. A simple look-up table (LUT) inversion technique was implemented to estimate canopy and soil variables. High negative relationships (r = −0.87) between the soil reflectance factor of the model and the measured SWC were found for several crop types and different locations exhibiting a low fractional vegetation cover (fCover). Even though quantification of SWC is difficult, the method could be useful to obtain relative SWC information, especially before the start and at the beginning of the growing season. Furthermore, the physically based estimation approach offers the possibility of getting information about soil and canopy characteristics concurrently from optical EO data. The methodology presented in this article may also represent a suitable complement in the retrieval of SWC from active microwave.
Stochastic Approach to Binary Matrix Partitioning for Phylogenetic Networks

In this research we introduce the problem of the binary matrix partitioning in a biological context. Our idea is to use SNP matrix to construct a set of phylogenetic networks to retrieve underlying biological meanings and dependencies. We emphasize stochastic methods for matrix clustering and briefly describe the search algorithm. It will allow us to perform fast distributed search on huge biological data for calculating person’s similarity.
Evaluation of Hands-free Human-Robot Interaction Using a Head Gesture Based Interface

Within this work, we present a usability study on head motion and head gesture based human-robot interaction. The hands-free interface has been developed to support disabled people who cannot use their upper limbs. The presented pilot study was carried out with 24 able-bodied subjects at the age from 19 to 67 years. The subjects controlled an assistive robot with head motions and head gestures to perform several pick and place tasks. The evaluation has been carried out objectively as well as subjectively. The interaction design has been proven successful and assessed overall positive by the subjects.
The Vicência meteorite fall: A new unshocked (S1) weakly metamorphosed (3.2) LL chondrite

The Vicência meteorite, a stone of 1.547 kg, fell on September 21, 2013, at the village Borracha, near the city of Vicência, Pernambuco, Brazil. It was recovered immediately after the fall, and our consortium study showed it to be an unshocked (S1) LL3.2 ordinary chondrite. The LL group classification is based on the bulk density (3.13 g cm−3); the chondrule mean apparent diameter (0.9 mm); the bulk oxygen isotopic composition (δ17O = 3.768 ± 0.042‰, δ18O = 5.359 ± 0.042‰, Δ17O = 0.981 ± 0.020‰); the content of metallic Fe,Ni (1.8 vol%); the Co content of kamacite (1.73 wt%); the bulk contents of the siderophile elements Ir and Co versus Au; and the ratios of metallic Fe0/total iron (0.105) versus total Fe/Mg (1.164), and of Ni/Mg (0.057) versus total Fe/Mg. The petrologic type 3.2 classification is indicated by the beautifully developed chondritic texture, the standard deviation (~0.09) versus mean Cr2O3 content (~0.14 wt%) of ferroan olivine, the TL sensitivity and the peak temperature and peak width at half maximum, the cathodoluminescence properties of chondrules, the content of trapped 132Xetr (0.317 × 10−8cm3STP g−1), and the Raman spectra for organic material in the matrix. The cosmic ray exposure age is ~72 Ma, which is at the upper end of the age distribution of LL group chondrites. The meteorite is unusual in that it contains relatively large, up to nearly 100 μm in size, secondary fayalite grains, defined as olivine with Fa>75, large enough to allow in situ measurement of oxygen and Mn‐Cr isotope systematics with SIMS. Its oxygen isotopes plot along a mass‐dependent fractionation line with a slope of ~0.5 and Δ17O of 4.0 ± 0.3‰, and are similar to those of secondary fayalite and magnetite in the unequilibrated chondrites EET 90161, MET 96503, and Ngawi. These data suggest that secondary fayalite in Vicência was in equilibrium with a fluid with a Δ17O of ~4‰, consistent with the composition of the fluid in equilibrium with secondary magnetite and fayalite in other unequilibrated ordinary chondrites. Secondary fayalite and the chondrule olivine phenocrysts in Vicência are not in isotopic equilibrium, consistent with low‐temperature formation of fayalite during aqueous alteration on the LL parent body. That alteration, as dated by the 53Mn‐53Cr chronology age of secondary fayalite, took place 4.0−1.1+1.4 Ma after formation of CV CAIs when anchored to the quenched angrite D'Orbigny.
Dispersion Based Similarity for Mining Similar Papers in Citation Network

Measuring "similarity" has been established as afundamental problem and has been widely studied. In thispaper we propose a novel approach for establishing similarityin context of citation network. With the rapidly growing sizeof academic literature, the problem of finding similar researchpapers has become a challenging task. Research papers in acitation network often form communities based on an underlyingconcept. Our research shows that dispersion based similaritymeasure can be used as a strong measure for finding similarpapers based on similar connectivity in those communities andstructural relevance of the citation network. Our results showthat our approach works better than other conventional link-based similarity measures both quantitatively and qualitatively. One of the direct benefits of this research is to support the highlyspecialized information needs of a scholarly researcher workingin a specialized field of research.
Electrowetting on dielectric experiments using graphene

We report electrowetting on dielectric (EWOD) experiments using graphene; a transparent, flexible and stretchable nanomaterial. Graphene sheets were synthesized by chemical vapor deposition, and transferred to various substrates (including glass slides and PET films). Reversible contact angle changes were observed on the Teflon-coated graphene electrode with both AC and DC voltages. Nyquist plots of the EWOD reveal that the graphene electrode has higher capacitive impedance than gold electrodes under otherwise identical conditions, suggesting a lower density of pin-holes and defects in the Teflon/graphene electrode than in the Teflon/gold electrode. Furthermore, we have observed reduced electrolysis of the electrolyte and smaller leakage current in the dielectric layer (Teflon) on graphene electrodes than on Au electrodes at the same Teflon thickness and applied voltage. We expect that the improved EWOD properties using graphene as an electrode material will open the door to various applications, including flexible displays and droplet manipulation in three-dimensional microfluidics.
PLZF Expression during Colorectal Cancer Development and in Normal Colorectal Mucosa according to Body Size, as Marker of Colorectal Cancer Risk

Promyelocytic leukemia zinc finger protein (PLZF) is a protein involved in various signaling, growth regulatory, and differentiation pathways, including development/function of some T cells. Here, we aimed at the detection of PLZF during colorectal carcinogenesis, using immunofluorescence, and at the evaluation of the colocalization of PLZF with CD2 and CD56 positive cells (T, γ δ, NK, and NKT cells), using confocal-microscopy, along colorectal carcinogenesis, since its earliest stages, that is, dysplastic aberrant crypt foci (ACF). Furthermore, we analyzed PLZF in the normal colonic mucosa (NM) according to anthropometric parameters of the subject. NM exhibited strong CD56 fluorescent staining. This infiltration was lost in both ACF and colorectal carcinoma (CRC), while PLZF presence increased from NM to ACF and CRC. Strong association was found between CD56+ colonic mucosa cell infiltration and body mass index. Interestingly, an increased stromal PLZF-reactivity was present in NM of obese subjects. This study shows that overexpression of PLZF and exclusion of NK cells in dysplastic microenvironment are very early events in the stepwise sequence leading to CRC and that lower levels of CD56+ cells in NM, together with increased levels of PLZF+ cells, can be a reflection of colon cancer risk due to obesity.
Long-term impact of cardiac resynchronization therapy in mild heart failure: 5-year results from the REsynchronization reVErses Remodeling in Systolic left vEntricular dysfunction (REVERSE) study.

BACKGROUND The benefit of cardiac resynchronization therapy (CRT) among patients with mild heart failure (HF), reduced left ventricular (LV) function and wide QRS is well established. We studied the long-term stability of CRT. METHODS REVERSE was a randomized, double-blind study on CRT in NYHA Class I and II HF patients with QRS ≥120 ms and left ventricular ejection fraction (LVEF) ≤40%. After the randomized phase, all were programmed to CRT ON and prospectively followed through 5 years for functional capacity, echocardiography, HF hospitalizations, mortality, and adverse events. We report the results of the 419 patients initially assigned to CRT ON. FINDINGS The mean follow-up time was 54.8 ± 13.0 months. After 2 years, the functional and LV remodelling improvements were maximal. The 6-min hall walk increased by 18.8 ± 102.3 m and the Minnesota and Kansas City scores improved by 8.2 ± 17.8 and 8.2 ± 17.2 units, respectively. The mean decrease in left ventricular end-systolic volume index and left ventricular end-diastolic volume index was 23.5 ± 34.1 mL/m(2) (P < 0.0001) and 25.4 ± 37.0 mL/m2 (P < 0.0001) and the mean increase in LVEF 6.0 ± 10.8% (P < 0.0001) with sustained improvement thereafter. The annualized and 5-year mortality was 2.9 and 13.5% and the annualized and 5-year rate of death or first HF hospitalization 6.4, and 28.1%. The 5-year LV lead-related complication rate was 12.5%. CONCLUSION In patients with mild HF, CRT produced reverse LV remodelling accompanied by very low mortality and need for heart failure hospitalization. These effects were sustained over 5 years. Cardiac resynchronization therapy in addition to optimal medical therapy produces long-standing clinical benefits in mild heart failure. CLINICAL TRIAL REGISTRATION Clinicaltrials.gov identifier NCT00271154.
Using Statistics in Lexical Analysis

The computational tools available for studying machine-readable corpora are at present still rather primitive. In the more advanced lexicographic organizations, there are concordancing programs (see figure below), which are basically KWIC (key word in context (Aho et al., 1988, p. 122), (Salton, 1989, p. 384)) indexes with additional features such as the ability to extend the context, sort leftwards as well as rightwards, and so on. There is very little interactive software. The lack of interactive software is perhaps part of the reason why dictionaries produced in the United States pay little attention to machine-readable corpora, and are based on collections of selected citations, augmented by introspection, rather than analysis of whole texts. The situation is somewhat different in Britain. British lexicographers, especially those working on dictionaries for foreign learners, are beginning to depend heavily on machine-readable corpora. They use these corpora and the basic concordancing tool mentioned above to fill in detailed syntactic descriptions (prompting a move, that will probably dominate lexicography in the 1990s, towards more thorough descriptions of lexical syntax). In the Cobuild project of the 1980s, for example, the typical procedure was that a lexicographer was given the concordances for a word or group of words, marked up the printout with colored pens in order to identify the salient senses, and then wrote syntactic descriptions and definitions.
Stochastic Optimization of Multi Reservoir Systems Using a Heuristic Algorithm: Case Study From India

A general algorithm developed for stochastic optimization of multireservoir systems is used to determine optimal operational policies for five of the major reservoirs of the Parambikulam-Aliyar irrigation and power project in India. A closed-loop suboptimal policy was determined for the stochastic inflow, deterministic demand problem, subject to storage and cumulative release constraints imposed by an interstate water-sharing agreement. The closed-loop policies were further used to determine optimal rule curves for the major reservoirs. A comparison of the simulated optimal policies and the past performance of the project demonstrates the utility of the derived policies determined with the proposed algorithm.
Connections of the Pallial Telencephalon in the Senegal Bichir, Polypterus

The connections of the dorsal telencephalon (pallium) of the Senegal bichir (Polypterus senegalus) were investigated in order to test the hypothesis that the simple everted pallium of polypterid fishes is directly comparable to the evaginated pallium of most vertebrates. Neuroanatomical tracers (DiI or biotinylinated dextran amines) were injected into the three traditionally recognized divisions of the bichir pallium to determine their afferent and efferent connections. The connections were corroborated with injections into regions identified as projecting to, or receiving input from, one or more pallial divisions. The results suggest that the bichir pallium consists not of three, but only two primary divisions: a dorsomedial one and a dorsolateral one. This reinterpretation refutes the hypothesis of a direct one-to-one comparison with the tripartite pallium of most vertebrates. Homologues of the bichir dorsomedial and dorsolateral pallium are recognized in the lateral and medial pallium of anuran amphibians, respectively. The pallium of bichirs is compared to that of derived ray-finned fishes as a link between derived ray-finned fishes and other vertebrates. The available information on the connections of the pallium of teleosts suggests that only the olfactory recipient (pars posterior) of the pallium can be directly compared to bichirs and amphibians and that the remaining divisions of the pallium in teleosts are uniquely derived features of the teleost telencephalon.
OPI-JSA at SemEval-2017 Task 1: Application of Ensemble learning for computing semantic textual similarity

Semantic Textual Similarity (STS) evaluation assesses the degree to which two parts of texts are similar, based on their semantic evaluation. In this paper, we describe three models submitted to STS SemEval 2017. Given two English parts of a text, each of proposed methods outputs the assessment of their semantic similarity. We propose an approach for computing monolingual semantic textual similarity based on an ensemble of three distinct methods. Our model consists of recursive neural network (RNN) text auto-encoders ensemble with supervised a model of vectorized sentences using reduced part of speech (PoS) weighted word embeddings as well as unsupervised a method based on word coverage (TakeLab). Additionally, we enrich our model with additional features that allow disambiguation of ensemble methods based on their efficiency. We have used Multi-Layer Perceptron as an ensemble classifier basing on estimations of trained Gradient Boosting Regressors. Results of our research proves that using such ensemble leads to a higher accuracy due to a fact that each member-algorithm tends to specialize in particular type of sentences. Simple model based on PoS weighted Word2Vec word embeddings seem to improve performance of more complex RNN based auto-encoders in the ensemble. In the monolingual English-English STS subtask our Ensemble based model achieved mean Pearson correlation of . 785 compared with human annotators.
Iterative Cross-Correlation Analysis of Resting State Functional Magnetic Resonance Imaging Data

Seed-based cross-correlation analysis (sCCA) and independent component analysis have been widely employed to extract functional networks from the resting state functional magnetic resonance imaging data. However, the results of sCCA, in terms of both connectivity strength and network topology, can be sensitive to seed selection variations. ICA avoids the potential problems due to seed selection, but choosing which component(s) to represent the network of interest could be subjective and problematic. In this study, we proposed a seed-based iterative cross-correlation analysis (siCCA) method for resting state brain network analysis. The method was applied to extract default mode network (DMN) and stable task control network (STCN) in two independent datasets acquired from normal adults. Compared with the networks obtained by traditional sCCA and ICA, the resting state networks produced by siCCA were found to be highly stable and independent on seed selection. siCCA was used to analyze DMN in first-episode major depressive disorder (MDD) patients. It was found that, in the MDD patients, the volume of DMN negatively correlated with the patients' social disability screening schedule scores.
Real-Time Web Scale Event Summarization Using Sequential Decision Making

We present a system based on sequential decision making for the online summarization of massive document streams, such as those found on the web. Given an event of interest (e.g. "Boston marathon bombing"), our system is able to filter the stream for relevance and produce a series of short text updates describing the event as it unfolds over time. Unlike previous work, our approach is able to jointly model the relevance, comprehensiveness, novelty, and timeliness required by time-sensitive queries. We demonstrate a 28.3% improvement in summary F1 and a 43.8% improvement in time-sensitive F1 metrics.
LogLuv Encoding for Full-Gamut, High-Dynamic Range Images

The human eye can accommodate luminance in a single view over a range of about 10,000:1 and is capable of distinguishing about 10,000 colors at a given brightness. By comparison, typical computer monitors have a luminance range less than 100:1 and cover about half of the visible color gamut. Despite this difference, most digital image formats are geared to the capabilities of conventional displays, rather than the characteristics of human vision. In this paper, we propose a compact encoding suitable for the transfer, manipulation, and storage of high dynamic range color images. This format is a replacement for conventional RGB images, and encodes color pixels as log luminance values and CIE (u',v') chromaticity coordinates. We have implemented and distributed this encoding as part of the standard TIFF I/O library available by anonymous ftp. After explaining our encoding, we describe its use within TIFF and present some techniques for handling high dynamic range pixels, and demonstrate with an example image.
Palaeomagnetic Evidence for the Transitional Behaviour of the Geomagnetic Field

Summary A definition of transition intervals based on the definition of Normal, Intermediate and Reversed pole positions proposed by Wilson, Dagley and MCormack is used to select data for comparison with two models of the transitional geomagnetic field. The data for twenty-three transition intervals reported by various authors are reviewed. The diversity of pole paths and common westerly trends lend support to the model in which the non-dipole field becomes dominant during the transition (Larson et al.). However, certain similarities and the sharp east-west changes of longitude support a purely dipole model with an independently inverting equatorial dipole but there is no common pole path nor even a preferred sector of the globe as suggested by Creer and Ispir. Neither model is preferred and a combination of a three-component dipole and non-dipole fields may be needed. Much evidence indicates that the field passes through a minimum during a transition and the observed magnitudes suggest that the nondipole field decreases also. A possible link between inversions and tectonic activity is suggested by the detail recorded in some transitions while the fact that there are more transitions from the reversed mode of the field than from the normal mode implies that the two modes are not equally stable.