Miracle-dz/UniFAR-FTUs huggingface dataset:
Chitosan: a highly efficient renewable and recoverable bio-polymer catalyst for the expeditious synthesis of α-amino nitriles and imines under mild conditions

Commercial chitosan – without any post-modification with active Bronsted or Lewis acid centers – was found to be a highly efficient renewable and recoverable bio-polymer catalyst for the rapid and convenient synthesis of α-amino nitriles or imines from aromatic aldehydes and amines under mild reaction conditions at room temperature in high to quantitative yields. The α-amino nitrile derivatives were prepared through the Strecker reaction using trimethylsilyl cyanide (TMSCN) and catalyzed by chitosan as a heterogeneous bifunctional organocatalyst.
EFFECTS OF CALCIUM/MAGNESIUM QUOTIENTS AND NICKEL IN THE GROWTH MEDIUM ON GROWTH AND NICKEL ACCUMULATION IN PISTACIA ATLANTICA

We selected two serpentine (ultramafic) and non-serpentine populations of P. atlantica and a cultivar of P. vera cv. ‘Badami’, to compare their responses to two growth limiting factors of serpentine soils: low calcium (Ca)/ magnesium (Mg) quotients and high concentrations of nickel (Ni). A solution culture system using perlite as a neutral substrate was used for growing the plants. Growth and elemental composition of plants then were analyzed. All populations/species proved to be excluders of Ni but, interestingly the excluding ability of P. vera to prevent translocation of Ni from root to shoot was higher than that of both populations of P. atlantica. The plants of serpentine population of P. atlantica were more resistant to lower Ca/Mg quotients and higher concentrations of Ni. We suggest that the growth and exclusion responses of the tested plants to Ca/Mg quotients and Ni result from adaptations to their natural substrates, ultramafic or saline soils.
Exposure to Perfluoroalkyl Substances and Mortality for COVID-19: A Spatial Ecological Analysis in the Veneto Region (Italy)

Background: In the context of the COVID-19 pandemic, there is interest in assessing if per- and polyfluoroalkyl substances (PFAS) exposures are associated with any increased risk of COVID-19 or its severity, given the evidence of immunosuppression by some PFAS. The objective of this paper is to evaluate at the ecological level if a large area (Red Zone) of the Veneto Region, where residents were exposed for decades to drinking water contaminated by PFAS, showed higher mortality for COVID-19 than the rest of the region. Methods: We fitted a Bayesian ecological regression model with spatially and not spatially structured random components on COVID-19 mortality at the municipality level (period between 21 February and 15 April 2020). The model included education score, background all-cause mortality (for the years 2015–2019), and an indicator for the Red Zone. The two random components are intended to adjust for potential hidden confounders. Results: The COVID-19 crude mortality rate ratio for the Red Zone was 1.55 (90% Confidence Interval 1.25; 1.92). From the Bayesian ecological regression model adjusted for education level and baseline all-cause mortality, the rate ratio for the Red Zone was 1.60 (90% Credibility Interval 0.94; 2.51). Conclusion: In conclusion, we observed a higher mortality risk for COVID-19 in a population heavily exposed to PFAS, which was possibly explained by PFAS immunosuppression, bioaccumulation in lung tissue, or pre-existing disease being related to PFAS.
Variation of Lignin Monomeric Composition During Kraft Pulping of Eucalyptus globulus Heartwood and Sapwood

Abstract Heartwood and sapwood samples from Eucalyptus globulus were characterized by Py-GC/MS and GC-FID in respect to composition and content of lignin. The pyrolysis lignin-derived compounds were assembled by groups: “syringol,” “S-aldehydes,” “S-ketones,” “S-alcohols,” and “C11H12O3” (S-units); “guaiacol,” “eugenol,” “G-aldehydes,” “G-ketones,” “G-alcohols,” and “others” (G-units); “phenol” and “H-aldehydes” (H-units). Heartwood and sapwood had similar lignin content in an extractive-free basis (23.7% and 23.0%, respectively) and in lignin composition (S-units, 76.0% vs. 76.3%; G-units, 22.0% vs. 21.0%; H-units, 1.9% vs. 2.7%; S/G ratio 3.5 and 3.6). The wood samples were kraft pulped under isothermal conditions at 130°C, 150°C and 170°C and several cooking times. Heartwood and sapwood behaved similarly. At 130°C the delignification was slow with no significant selectivity in respect to lignin composition. At 150°C and 170°C the S-units were more susceptible to reaction and comparatively more removed, inducing a decrease of S/G ratio to 0.6. The main products to be extracted belong to “syringol” and “S-aldehydes,” while the residual lignin in pulps was enriched in “guaiacol,” “eugenol” (G-units), and “phenol” (H-units).
The Prisoner’s Dilemma paradigm provides a neurobiological framework for the social decision cascade

To function during social interactions, we must be able to consider and coordinate our actions with other people’s perspectives. This process unfolds from decision-making, to anticipation of that decision’s consequences, to feedback about those consequences, in what can be described as a “cascade” of three phases. The iterated Prisoner’s Dilemma (iPD) task, an economic-exchange game used to illustrate how people achieve stable cooperation over repeated interactions, provides a framework for examining this “social decision cascade”. In the present study, we examined neural activity associated with the three phases of the cascade, which can be isolated during iPD game rounds. While undergoing functional magnetic resonance imaging (fMRI), 31 adult participants made a) decisions about whether to cooperate with a co-player for a monetary reward, b) anticipated the co-player’s decision, and then c) learned the co-player’s decision. Across all three phases, participants recruited the temporoparietal junction (TPJ) and the dorsomedial prefrontal cortex (dmPFC), regions implicated in numerous facets of social reasoning such as perspective-taking and the judgement of intentions. Additionally, a common distributed neural network underlies both decision-making and feedback appraisal; however, differences were identified in the magnitude of recruitment between both phases. Furthermore, there was limited evidence that anticipation following the decision to defect evoked a neural signature that is distinct from the signature of anticipation following the decision to cooperate. This study is the first to delineate the neural substrates of the entire social decision cascade in the context of the iPD game.
Edge-Based Decentralized Adaptive Pinning Synchronization of Complex Networks Under Link Attacks

This article studies the pinning synchronization problem with edge-based decentralized adaptive schemes under link attacks. The link attacks considered here are a class of malicious attacks to break links between neighboring nodes in complex networks. In such an insecure network environment, two kinds of edge-based decentralized adaptive update strategies (synchronous and asynchronous) on coupling strengths and gains are designed to realize the security synchronization of complex networks. Moreover, by virtue of the edge pinning technique, the corresponding secure synchronization problem is considered under the case where only a small fraction of coupling strengths and gains is updated. These designed adaptive strategies do not require any global information, and therefore, the obtained results in this article are developed in a fully decentralized framework. Finally, a numerical example is provided to verify the availability of the achieved theoretical outcomes.
Symptomatic features and prognosis of 932 hospitalized COVID-19 patients in Wuhan.

BACKGROUND COVID-19 has caused an ongoing worldwide pandemic. Much remains unknown about detailed symptomatic features of COVID-19 onset and rehabilitation. METHODS In this retrospective cohort study, 932 hospitalized patients with COVID-19 in Wuhan were enrolled, including 52 severe cases and 880 non-severe cases. The symptomatic features were analyzed and compared between the severe and non-severe groups. All patients were followed up 3 months after discharge. RESULTS Of the 932 patients, fever (60%), cough (50.8%), and fatigue (36.4%) were the most common symptoms, followed by anorexia (21.8%) and dyspnea (19.2%). The median duration of fever was 7 days, which was characterized by persistent low fever. The median duration of cough was 17 days, characterized by dry cough without sputum. Most dyspnea occurred on the fourth day after illness onset, with a median duration of 16 days. The incidences of taste loss and olfactory disturbance were only 6.2% and 3.1%, respectively. After adjusting age and gender, multivariate regression analysis showed that fever lasting for more than 5 days (OR 1.90, 95%CI 1.00-3.62, P = 0.0498), anorexia at onset (2.61, 1.26-5.40, P = 0.0096), and modified Medical Research Council level above grade 2 when dyspnea occurred (14.19, 7.01-28.71, P < 0.0001) were symptomatic risk factors for severe COVID-19. Through follow-up, cough (6.2%), dyspnea (7.2%), fatigue (1.8%), olfactory and taste disorders (1.5%) were the significant remaining symptoms. CONCLUSIONS COVID-19 caused clusters of symptoms with multiple systems involved. Certain symptomatic characteristics have predictive value for severe COVID-19. Short-term follow-up showed that most patients had a good prognosis.
HTLV‐1 oncovirus‐host interactions: From entry to the manifestation of associated diseases

Human T lymphotropic virus type‐1 (HTLV‐1) is a well‐known human oncovirus, associated with two life‐threatening diseases, adult T cell leukaemia/lymphoma (ATL) and HTLV‐1 associated myelopathy/tropical spastic paraparesis (HAM/TSP). The study of this oncogenic virus is significant from two different aspects. First, HTLV‐1 can be considered as a neglected public health problem, which may spread slowly worldwide. Second, the incidence of HTLV‐1 associated diseases due to oncogenic effects and deterioration of the immune system towards autoimmune diseases are not fully understood. Furthermore, knowledge about viral routes of transmission is important for considering potential interventions, treatments or vaccines in endemic regions. In this review, novel characteristics of HTLV‐1, such as the unusual infectivity of virions through the virological synapse, are discussed in the context of the HTLV‐1 associated diseases (ATL and HAM/TSP).
Epidemiology of biopsy-confirmed giant cell arteritis in southern Sweden—an update on incidence and first prevalence estimate

Abstract Objective To characterize the epidemiology of temporal artery biopsy-positive (TAB+) GCA, including trends in incidence, seasonal variation and prevalence in Skåne, the southernmost region of Sweden. Methods All histopathology reports of TABs from 1997 through 2019 were reviewed to identify patients diagnosed with TAB+ GCA. Incidence rates based on the 23-year period and the point-prevalence at 31 December 2014 were determined. An alternative prevalence calculation included only TAB+ GCA patients living in the study area and receiving immunosuppressant therapy on the point-prevalence date. Results One thousand three hundred and sixty patients were diagnosed with TAB+ GCA (71% female). The average annual incidence 1997–2019 was 13.3 (95% CI: 12.6, 14.0) per 100 000 inhabitants aged ≥50 years and was higher in females (17.8; 95% CI: 16.7, 18.9) than in males (8.2; 95% CI: 7.4, 9.0). The age- and sex-standardized incidence declined from 17.3 in 1997 to 8.7 in 2019, with incidence ratio (IR) of 0.98 per year (95% CI: 0.98, 0.99). A seasonal variation was observed with higher incidence during spring than winter [IR = 1.19 (95% CI: 1.03, 1.39)]. The overall point-prevalence of TAB+ GCA was 127.1/100 000 (95% CI: 117, 137.3) and was 75.5 (95% CI: 67.7, 83.3) when including only patients receiving immunosuppressants. Conclusion Over the past 2 decades, the incidence of biopsy-confirmed GCA has decreased by ∼2% per year. Still, a high prevalence of GCA on current treatment was observed. More cases are diagnosed during spring and summer than in the winter.
Appropriate aglycone modification significantly expands the glycan substrate acceptability of α1,6-fucosyltransferase (FUT8).

The α1,6-fucosyltransferase, FUT8, is the sole enzyme catalyzing the core-fucosylation of N-glycoproteins in mammalian systems. Previous studies using free N-glycans as acceptor substrates indicated that a terminal β1,2-GlcNAc moiety on the Man-α1,3-Man arm of N-glycan substrates is required for efficient FUT8-catalyzed core-fucosylation. In contrast, we recently demonstrated that, in a proper protein context, FUT8 could also fucosylate Man5GlcNAc2 without a GlcNAc at the non-reducing end. We describe here a further study of the substrate specificity of FUT8 using a range of N-glycans containing different aglycones. We found that FUT8 could fucosylate most of high-mannose and complex-type N-glycans, including highly branched N-glycans from chicken ovalbumin, when the aglycone moiety is modified with a 9-fluorenylmethyloxycarbonyl (Fmoc) moiety or in a suitable peptide/protein context, even if they lack the terminal GlcNAc moiety on the Man-α1,3-Man arm. FUT8 could also fucosylate paucimannose structures when they are on glycoprotein substrates. Such core-fucosylated paucimannosylation is a prominent feature of lysosomal proteins of human neutrophils and several types of cancers. We also found that sialylation of N-glycans significantly reduced their activity as substrate of FUT8. Kinetic analysis demonstrated that Fmoc aglycone modification could either improve the turnover rate or decrease the Km value depending on the nature of the substrates, thus significantly enhancing the overall efficiency of FUT8 catalyzed fucosylation. Our results indicate that an appropriate aglycone context of N-glycans could significantly broaden the acceptor substrate specificity of FUT8 beyond what has previously been thought.
Effects of Platelet Rich Plasma and Amniotic Cell Culture Medium on Wound Healing Following Experimental Animal Tracheal Injury Model: A Comparative Study

Introduction: Prolonged inflammation after tracheal injury invariably results in a degree of stenosis. The topical application of platelet-rich plasma (PRP) and human amniotic fluid-derived cell culture medium (ACCM) have been shown to promote wound healing. The effects of PRP and amniotic cell culture medium (Gibco AmnioMAX - II ) were investigated in a rat model through morphometric, histological, and biochemical parameters. Material & Methods: Thirty-two male Sprague Dawley rats were included in the study: 4 rats provided for the preparation of PRP. Three groups of 7 rats were divided into PRP and ACCM groups, a control and a sham group respectively. A transverse incision on the ventral aspect of the third trachea spanning half of the tracheal circumference was performed. The incision was repaired with 7/0 polypropylene in the sham group. In the control group, 0.5 ml saline solution was applied on to the repaired injury site. In the other two groups, 0.5 mL PRP or ACCM were applied topically on the tracheal repair. Tissue samples were harvested 30 days after surgery for morphometric measurements and biochemical analyses for oxidative stress markers, IL-1beta, IL-6, and VEGF. Connective tissue thickness was evaluated histologically. Statistical analysis included the Mann-Whitney U and Kruskal Wallis tests. Results: A notable difference was detected (P = 0,025) in cartilage segment length measurements of the trachea between the ACCM group and the sham and control groups (P < 0.03). A significant difference was found in the analysis of TAS, TOS, and OSI values between the study groups and the control and sham groups (P < 0.005). There were also differences in IL1-beta and IL-6 levels between ACCM and PRP groups (P < 0.05). For the same parameters, the differences were significant between the PRP and, sham and control groups (P = 0,004 and P = 0,002 respectively), and between the ACCM and, sham and control groups (P = 0,003 and P = 0,002 respectively). VEGF values demonstrated a significant difference between the PRP and sham group (P = 0,002), and between ACCM and sham/control groups (p=0,002 for both), the highest VEGF value was in ACCM group while the lowest value was in the sham group. In the histological assessment of connective tissue, a significant difference was observed between ACCM and the other groups. Conclusion: Amniotic fluid-derived cell culture medium shows less oxidative stress status than the other applications. ACCM is more effective on inflammatory and angiogenetic processes. Connective tissue thickness results were consistent with those biochemical and morphologic results. Additionally, a significant difference was observed in histological data between ACCM and PRP. Overall, ACCM proved to be efficient on tracheal healing. These effects can be attributed to the abundance of growth factors in both PRP and amniotic fluid-derived cell culture medium (ACCM).
Mental health disorder symptom prevalence and rates of help-seeking among University-Enrolled, emerging adults

Abstract Objective. Examine mental health symptom prevalence and rates of campus services utilization among Black male, White male and Black female college students. Participants. 2500 students from an ongoing, student survey at a public university; launched in 2011. Methods. Measures included data for anxiety and depressive symptoms and utilization of campus health services (counseling center, health services, etc.). Descriptive analyses determined prevalence and utilization rates. Mann Whitney U tests compared prevalence. Chi-squared tests compared utilization rates. Results. Anxiety prevalence: greater than 60% of students from each ethnic group reported symptoms; reporting rates decreased significantly for Black men (49.6%); p < 0.001. Depression prevalence: greater than 80% reported symptoms; there were significant differences in reporting between Black men and Black women (72.7% vs. 87.1%, p < 0.001). Utilization: Black men utilized counseling services less than White men (20.4% vs. 37.8%, p = 0.024). Conclusion. Black men report depressive and anxiety symptoms but underutilize campus health resources.
Water quality and plankton densities in mixed shrimp-mangrove forestry farming systems in Vietnam

Water quality and plankton densities were monitored in shrimp ponds at 12 mixed shrimp-mangrove forestry farms in Ca Mau province, southern Vietnam, to detail basic water chemistry and assess whether conditions are suitable for shrimp culture. In general, water quality was not optimal for shrimp culture. In particular, ponds were shallow (mean ± 1SE, 50.5 ± 2.8 cm), acidic (pH < 6.5), had high suspended solids (0.3 ± 0.03 g l-1), low chlorophyll a/phytoplankton concentrations (0.2 ± 0.05 μg l-1 and 8600 ± 800 cells l-1 respectively) and low dissolved oxygen (DO) levels (3.7 ± 0.15 mg l-1). Eight out of the 12 farms sampled had potentially acid sulphate soils (pH < 4.2). Salinity, DO and pH were highly variable over short time-periods (hours); DO in particular was reduced to potentially lethal levels (1-2 mg l-1). Seasonal variations in water chemistry and plankton communities (i.e. salinity, DO, phosphate, temperature, phytoplankton and zooplankton densities) appear to be driven by differences in rainfall patterns. The presence or absence of mangroves on internal pond levees ('mixed' versus 'separate' farms) and the source of pond water (rivers versus canals) were of lesser importance in determining water quality patterns and plankton biomass. Zooplankton and macrobenthos densities were sufficient to support the current (low) stocking densities of shrimp. However, natural food sources are not adequate to support increases in production by stocking hatchery reared post larvae. Increasing productivity by fertilization and/or supplemental feeding has the potential for adverse water quality and would require improvements to water management practices. Some practical strategies for improving water quality and plankton densities are outlined.
Tofacitinib for the Treatment of Ulcerative Colitis: Analysis of Nonmelanoma Skin Cancer Rates From the Ulcerative Colitis Clinical Program

Abstract Background Tofacitinib is an oral, small molecule Janus kinase inhibitor for the treatment of ulcerative colitis (UC). We present integrated analyses of nonmelanoma skin cancer (NMSC) incidence in the tofacitinib UC clinical program. Methods Nonmelanoma skin cancer events were evaluated from 3 randomized, placebo-controlled studies: 2 identical, 8-week induction studies (NCT01465763, NCT01458951), a 52-week maintenance study (NCT01458574), and an open-label, long-term extension study (NCT01470612). Cohorts analyzed were: Induction, Maintenance, and Overall (patients receiving ≥1 dose of tofacitinib 5 mg or 10 mg twice daily [BID]). An independent adjudication committee reviewed potential NMSC. Proportions and incidence rates (IRs; unique patients with events per 100 patient-years of exposure) for NMSC were evaluated. A Cox proportional hazards model was used for risk factor analysis. Results Nonmelanoma skin cancer was evaluated for 1124 patients (2576.4 patient-years of tofacitinib exposure; ≤6.8 years’ treatment). In the Induction Cohort, NMSC IR was 0.00 for placebo and 1.26 for 10 mg BID. Nonmelanoma skin cancer IR was 0.97 for placebo, 0.00 for 5 mg BID and 1.91 for 10 mg BID in the Maintenance Cohort, and 0.73 (n = 19) in the Overall Cohort. No NMSC was metastatic or led to discontinuation. In the Overall Cohort, Cox regression identified prior NMSC (hazard ratio [HR], 9.09; P = 0.0001), tumor necrosis factor inhibitor (TNFi) failure (3.32; P = 0.0363), and age (HR per 10-year increase, 2.03; P = 0.0004) as significant independent NMSC risk factors. Conclusions For patients receiving tofacitinib, NMSC occurred infrequently. Older age, prior NMSC, and TNFi failure, which are previously reported NMSC risk factors in patients with UC, were associated with increased NMSC risk.
An update on levosimendan in acute cardiac care: applications and recommendations for optimal efficacy and safety

ABSTRACT Introduction: In the 20 years since its introduction to the palette of intravenous hemodynamic therapies, the inodilator levosimendan has established itself as a valuable asset for the management of acute decompensated heart failure. Its pharmacology is notable for delivering inotropy via calcium sensitization without an increase in myocardial oxygen consumption. Areas covered: Experience with levosimendan has led to its applications expanding into perioperative hemodynamic support and various critical care settings, as well as an array of situations associated with acutely decompensated heart failure, such as right ventricular failure, cardiogenic shock with multi-organ dysfunction, and cardio-renal syndrome. Evidence suggests that levosimendan may be preferable to milrinone for patients in cardiogenic shock after cardiac surgery or for weaning from extracorporeal life support and may be superior to dobutamine in terms of short-term survival, especially in patients on beta-blockers. Positive effects on kidney function have been noted, further differentiating levosimendan from catecholamines and phosphodiesterase inhibitors. Expert opinion:Levosimendan can be a valuable resource in the treatment of acute cardiac dysfunction, especially in the presence of beta-blockers or ischemic cardiomyopathy. When attention is given to avoiding or correcting hypovolemia and hypokalemia, an early use of the drug in the treatment algorithm is preferred.