Miracle-dz/UniFAR-FTUs huggingface dataset:
The Effects of Epidural Block on the Distribution of Lymphocyte Subsets and Natural-Killer Cell Activity in Patients with and without Pain

Although epidural anesthesia prevents immune suppression during surgery, no reports have elucidated how epidural block affects immune response in nonsurgical patients. We examined changes in proportion of lymphocyte subsets and in natural-killer (NK) cell activity in patients with and without pain. Fifteen patients with pain (Pain group) and 15 preoperative patients without pain (Preoperative group) received three different treatments in random order: epidural block with 7 mL 1% lidocaine, epidural injection of an identical volume of normal saline, and IV injection of 1 mg/kg lidocaine. Blood samples were drawn before and after 30, 60, and 120 min of treatment. During epidural block at 30 and 60 min, both groups showed significantly decreased epinephrine, norepinephrine, and cortisol levels, and the proportion of NK cells decreased, whereas the CD4+/CD8+ ratio increased significantly. NK cell activity in both groups decreased significantly at 30 and 60 min. At 120 min, the variables had all returned to preblock values. During treatments with saline and IV lidocaine, neither group showed significant changes in any of the above variables. We conclude that epidural block causes a transient and significant alteration of lymphocyte subsets and NK cell activity regardless of pain status. Implications Epidural block causes a transient and significant alteration of lymphocyte subsets and natural-killer cell activity regardless of pain status. Our results indicate that local sympathetic nerve block may be important in modulating an immune response.
Effects of salinity on the survival and aggression of the invasive Rio Grande cichlid (Herichthys cyanoguttatus)

Abstract The spread of non-native Rio Grande cichlids (Herichthys cyanoguttatus) in southeast Louisiana includes brackish habitats. We studied the effects of three different salinity levels on the biology of juvenile H. cyanoguttatus for 13 months to determine the potential of this species to spread through local estuaries. The highest salinity tolerated was 30.0 psu, and these fish did not survive acclimation to the 32 psu treatment. Fish in brackish conditions grew slower than fish in freshwater conditions, indicating a potential long-term detriment to juvenile fish living in brackish conditions. Aggression levels were notably higher for fish in brackish (15 psu) vs. freshwater conditions. This persisted through the entire experiment even after acclimation back to freshwater. This study indicates that higher salinity habitats in Louisiana can be tolerated by this species. It also raises a question about the effect of higher salinities on aggressive behavior.
Direct evidence for biased gene diversity estimates from dominant random amplified polymorphic DNA (RAPD) fingerprints

The relevance of using dominant random amplified polymorphic DNA (RAPD) fingerprints for estimating population differentiation was investigated when typically small population sample sizes were used. Haploid sexual tissues were first used to determine genotypes at RAPD loci for 75 eastern white pines (Pinus strobus L.) representing five populations. Dominant RAPD fingerprints were then inferred from genotypic data for each individual at each locus, and gene diversity estimates from both sources of data were compared. Genotypic information at RAPD loci indicated little or no differentiation among populations, similar to allozyme loci. However, estimates of population differentiation derived from dominant RAPD fingerprints according to various common methods of analysis were generally inflated, especially when all fragments were considered. Simulations showed that an increase in loci sampling and population sample sizes did not significantly alleviate the biases observed.
FACTORS MODIFYING HOST RESISTANCE TO VIRAL INFECTION

The resistance of mice to encephalomyocarditis (EMC) virus was markedly decreased by prior exposure to whole body X-irradiation. In contrast to non-irradiated controls, the course of EMC virus infection in X-irradiated animals was characterized by (a) an enhanced mortality, (b) shortening of the incubation period, (c) higher levels of virus in the blood during the viremic phase and persistence of the viremia until death, (d) failure to develop detectable serum levels of neutralizing antibody, and (e) the earlier appearance and higher levels of virus in brain and heart tissue. The level of interferon in the serum during the course of infection was similar in both groups. The administration of relatively small quantities of anti-EMC virus neutralizing antibody to X-irradiated mice during the early phases of the infection with EMC virus restored their resistance to levels comparable to nonirradiated animals. An alteration of local organ defense mechanisms in the central nervous system could not be demonstrated. It is proposed that (a) the inability of the X-irradiated animal to elaborate specific neutralizing antibody was a critical determinant in their failure to clear the viremia, (b) this increase in the level and duration of the viremic phase resulted in the exposure of target organs to a greater inoculum of virus, and (c) the enhanced mortality observed in irradiated mice reflected this greater target organ involvement. The experimental model presented, therefore, suggests that the immunologic response is a critical determinant of host resistance during this primary systemic virus infection.
Survival and Cause-Specific Mortality of Corsac and Red Foxes in Mongolia

Abstract The corsac fox (Vulpes corsac) and red fox (Vulpes vulpes) range widely across northern and central Asia and may be declining in many regions due to overhunting and other causes. However, details of the fundamental causes of survival and mortality of both species remain largely unquantified, but may be crucial for understanding interspecific relationships and developing effective conservation actions. We studied a radiomarked population of sympatric corsac and red foxes in central Mongolia to quantify survival and cause-specific mortality rates from April 2005 to April 2007. Survival probability was 0.34 for corsacs (n = 18) and 0.46 for red foxes (n = 17) and did not vary by year within or between each species. Among both foxes, mortality occurred mainly from hunting by humans, but also from predation by larger canids and unknown causes. Our results suggest that illegal human hunting represents the principal source of mortality for both species and that a recently initiated ranger patrol program in the study area did not affect fox survival. As such, more stringent protective measures will likely be necessary to halt declines of both foxes. Our results also suggest that interference competition occurs between species as red foxes killed but did not consume corsacs. Our results will be useful for developing science-based management strategies to protect foxes in Mongolia, and in understanding the competitive relationships between them.
Antagonistic Effect of Trichoderma Against Fusarium moniliformae the Causal of Sugarcane Wilt

Antagonism by six Trichoderma isolates viz., TCVSI-1, TCVSI-3, TCVSI-4, TCVSI-5, TCVSI-8 and TCVSI-10 to F. moniliformae - a pathogen causing wilt disease in sugarcane was examined in vitro. Four concentrations of Liquid Culture Filtrate (LCF) of these Trichoderma species were tested against mycelial growth (MG). The Percent Inhibition of Mycelial Growth (PIMG) recorded high by LCF of TCVSI- 1 (39.70), TCVSI-1 (48.86), TCVSI-1 (58.78) and TCVSI-3 (86.26), followed by TCVSI-5 (33.59), TCVSI-3 (38.17), TCVSI-3 (53.44) and TCVSI-5 (82.44) in 25, 50, 75 and 100% concentrations respectively. In method- 1, the lowest colony diameter was recorded by TCVSI-3 i.e. 13.33 mm, which is at par with TCVSI-1 (13.67 mm) and in control (34.00 mm). The highest PIMG was recorded in TCVSI-3 (60.78), followed by TCVSI-1 (59.80). In method-2, the highest colony diameter was recorded by TCVSI-5 (44.27 mm), followed by TCVSI-1 (41.98 mm) and TCVSI-3 (41.22 mm) and lowest colony diameter was recorded TCVSI-5 (24.33 mm), followed by TCVSI-1 (25.33 mm) and TCVSI-3 (25.67 mm). Present study showed that the different Trichoderma isolates have good antagonistic effect on the MG of F. moniliformae.
Modelled spatial distribution of marine fish and projected modifications in the North Atlantic Ocean

The objectives of this work were to examine the past, current and potential influence of global climate change on the spatial distribution of some commercially exploited fish and to evaluate a recently proposed new ecological niche model (ENM) called nonparametric probabilistic ecological niche model (NPPEN). This new technique is based on a modified version of the test called Multiple Response Permutation Procedure (MRPP) using the generalized Mahalanobis distance. The technique was applied in the extratropical regions of the North Atlantic Ocean on eight commercially exploited fish species using three environmental parameters (sea surface temperature, bathymetry and sea surface salinity). The numerical procedure and the model allowed a better characterization of the niche (sensu Hutchinson) and an improved modelling of the spatial distribution of the species. Furthermore, the technique appeared to be robust to incomplete or bimodal training sets. Despite some potential limitations related to the choice of the climatic scenarios (A2 and B2), the type of physical model (ECHAM 4) and the absence of consideration of biotic interactions, modelled changes in species distribution explained some current observed shifts in dominance that occurred in the North Atlantic sector, and particularly in the North Sea. Although projected changes suggest a poleward movement of species, our results indicate that some species may not be able to track their climatic envelope and that climate change may have a prominent influence on fish distribution during this century. The phenomenon is likely to trigger locally major changes in the dominance of species with likely implications for socio‐economical systems. In this way, ENMs might provide a new management tool against which changes in the resource might be better anticipated.
The henicopid centipede Haasiella (Chilopoda: Lithobiomorpha): new species from Australia, with a morphology-based phylogeny of Henicopidae

Paralamyctes (Haasiella) Pocock, 1901 (= Wailamyctes Archey, 1917) includes three described species from New Zealand and its Subantarctic Islands. Australian species of P. (Haasiella) include P. (H.) subicolus n. sp. from Tasmania and a clade composed of P. (H.) cammooensis n. sp. from Queensland and New South Wales, P. (H.) ginini n. sp. from New South Wales and the Australian Capital Territory, and an allied species from Tasmania. Monophyly of P. (Haasiella) and the membership of a P. (H.) cammooensis Group are supported by parsimony analysis of morphological characters. A grouping of P. (Haasiella) and P. (Thingathinga) as retrieved by molecular data analysis is also found in minimal length cladograms based on morphology. The dataset incorporates new information on several previously poorly known henicopids, including the types of Lamyctopristus Attems, 1928, and Analamyctes Chamberlin, 1955.
Basking behaviour in two sympatric herbivorous lizards (Liolaemidae: Phymaturus) from the Payunia volcanic region of Argentina

We studied several aspects of the thermal biology of two coexisting saxicolous species of the genus Phymaturus (Liolaemidae) at the Payunia, a volcanic region in Argentina where harsh conditions prevail. We marked individuals in grids and assessed the environmental conditions when the individuals showed their maximum activity (i.e. when more than 50% of marked individuals were active), the time spent basking, and the postural behaviour in relation to different cloudiness conditions. We found that temperatures recorded when the species exhibit their peaks of activity were higher for Phymaturus payuniae, the smaller species, during the summer at one of the three studied sites. Phymaturus roigorum exhibited the longest basking periods, but during these longer periods cloudy conditions prevailed. Both species adopted a head-up posture when conditions were sunny and a head-down posture when under cloudy conditions. This is the first contribution where thermal aspects of two sympatric species of Phymaturus are evaluated.
Seasonal assessment of the reproductive cycle and energy reserves of male bats Sturnira lilium (Chiroptera: Phyllostomidae)

Abstract Bats play an important role in regulating ecosystems, and seasonality has great influence on their reproductive cycle and storage status of bodily energy reserves. Aiming at a better understanding of the dynamics of these processes, male little yellow-shouldered bats (Sturnira lilium) were captured during both the dry and rainy seasons and their reproductive and metabolic patterns were established. Testes were processed histologically for morphometric analysis by light microscopy. Plasma glucose and testosterone concentrations were determined, as well as liver and muscle glycogen, lipids, and protein. Data showed little variation in testicular morphometrical parameters and also in body energy reserves between the seasons evaluated. We conclude that occasional season variations in bodily energy reserves in S. lilium do not seem to present a major influence on testicular morphometry in this species, which may reflect a successful adaptation of S. lilium to its habitats.
Transformações de dados em experimentos com abobrinha italiana em ambiente protegido

The interest in horticulture is the production of marketable fruit. In such experiments , phytomass and the number of fruits are commonly measured variables. However, these variables have a particular characteristic related to their absence or presence at harvest time. This attribute is represented by zero values for these variables, generating some variability and affecting the variance analysis. This work aimed to define an appropriate data transformation for the variables observed in experiments with the zucchini culture, realized in protected environment, designed to stabilize the variability values generated by the presence of zeros in harvest multiple fruit. The analysis was based on experiments with the zucchini culture ,using the family of the Box-Cox transformation, with an adaptation made by YAMAMURA (1999). It was concluded that for experiments with zucchini, assessing the phytomass and number of fruits, the square square root transformation is indicated. The same was observed with the reduction in variability and normal errors, observed in all experiments. The use of the method was not efficient to make the variances homocedastic.
Size of the local species pool determines invasibility of a C4‐dominated grassland

The size of the local species pool (i.e., species surrounding a community capable of dispersal into that community) and other dispersal limitations strongly influence native plant community composition. However, the role that the local species pool plays in determining the invasibility of communities by exotic plants remains to be evaluated. We hypothesized that the richness and abundance of exotic species would be greater in C4-dominated grassland communities if the local species pool included a larger proportion of exotic species. We also predicted that an increase in the exotic species pool would increase the invasibility of sites thought to be resistant to invasion (annually burned grassland). To test these hypotheses, study plots were established within two long-term ( > 20 yr) fire experiments at a tallgrass prairie preserve in NE Kansas (USA). Study plots were surrounded by either a small pool of exotic species (small species pool (SSP) plots; six species) or a larger exotic species pool (large species pool (LSP) plots; 18 species). We found that richness and absolute cover of exotic species were significantly (P < 0.001) lower (~ 70 and 90%, respectively) in annually burned compared to unburned plots, regardless of the size of the exotic species pool. As predicted, exotic species richness was higher (P < 0.001) for LSP plots (3.9 per 250 m2) than for SSP plots (0.7 per 250 m2); however, absolute cover was unaffected by the size of the exotic species pool. In the absence of fire, plots with a LSP had four times as many exotic species than SSP plots. An increase in the local exotic species pool also increased the invasibility of annually burned grassland. Indeed, richness of exotic plant species in annually burned LSP plots did not differ from unburned plots with a SSP, indicating that a larger pool of exotic species countered the negative effects of fire. These findings have important implications for predicting how the invasion of plant communities may respond to human-induced global changes, such as habitat fragmentation. Community characteristics or factors such as frequent fires in grasslands may impart resistance to invasions by exotic species in large, intact ecosystems. However, when a large pool of exotic species is present, frequent fire may not be sufficient to limit the invasions of exotic plants in fragmented landscapes.
A task-specific deep-learning-based denoising approach for myocardial perfusion SPECT

Deep-learning (DL)-based methods have shown significant promise in denoising myocardial perfusion SPECT images acquired at low dose. For clinical application of these methods, evaluation on clinical tasks is crucial. Typically, these methods are designed to minimize some fidelity-based criterion between the predicted denoised image and some reference normal-dose image. However, while promising, studies have shown that these methods may have limited impact on the performance of clinical tasks in SPECT. To address this issue, we use concepts from the literature on model observers and our understanding of the human visual system to propose a DL-based denoising approach designed to preserve observer-related information for detection tasks. The proposed method was objectively evaluated on the task of detecting perfusion defect in myocardial perfusion SPECT images using a retrospective study with anonymized clinical data. Our results demonstrate that the proposed method yields improved performance on this detection task compared to using low-dose images. The results show that by preserving task-specific information, DL may provide a mechanism to improve observer performance in low-dose myocardial perfusion SPECT.
Molecular phylogeny and diversification history of Prosopis (Fabaceae: Mimosoideae)

The genus Prosopis is an important member of arid and semiarid environments around the world. To study Prosopis diversification and evolution, a combined approach including molecular phylogeny, molecular dating, and character optimization analysis was applied. Phylogenetic relationships were inferred from five different molecular markers (matK-trnK, trnL-trnF, trnS-psbC, G3pdh, NIA). Taxon sampling involved a total of 30 Prosopis species that represented all Sections and Series and the complete geographical range of the genus. The results suggest that Prosopis is not a natural group. Molecular dating analysis indicates that the divergence between Section Strombocarpa and Section Algarobia plus Section Monilicarpa occurred in the Oligocene, contrasting with a much recent diversification (Late Miocene) within each of these groups. The diversification of the group formed by species of Series Chilenses, Pallidae, and Ruscifoliae is inferred to have started in the Pliocene, showing a high diversification rate. The moment of diversification within the major lineages of American species of Prosopis is coincident with the spreading of arid areas in the Americas, suggesting a climatic control for diversification of the group. Optimization of habitat parameters suggests an ancient occupation of arid environments by Prosopis species. © 2008 The Linnean Society of London, Biological Journal of the Linnean Society, 2008, 93, 621–640.
Triiodothyronine influences digesta kinetics and methane yield in sheep

Methane yield from ruminants is positively correlated with mean retention time (MRT) of digesta, which is known to be influenced by the hormone triiodothyronine (T3). We hypothesised that a decrease in the MRT in the rumen in response to administration of a T3 solution to sheep would reduce their methane yield. To test this hypothesis, 10 mature Merino wethers were injected with T3 (300 µg) on two different protocols (daily; n = 5 and every second day; n = 5) and the effect on daily methane yield, digesta MRT, DM digestibility, rumen volatile fatty acid concentrations, microbial protein output and plasma T3 concentrations studied. Compared with when injected with saline (control), injection of sheep with T3 every second day resulted in decreased methane yield (P 0.05). DM digestibility was not affected by injection of T3 every second day but water intake (P < 0.05) and urine output (P < 0.01) were increased. When sheep were injected with T3 daily, changes were only observed in plasma T3 concentration (P < 0.001) and volume of CO2 produced (P < 0.05). The results indicate that increasing plasma concentration of the thyroid hormone T3 within physiological levels reduces digesta retention time, especially retention time in the hindgut and leads to a reduction in enteric methane yield. Further work is warranted to assess whether plasma T3 concentrations may be indicative of enteric methane yield.
Knowledge production and learning for sustainable forest management on the ground: Pan-European landscapes as a time machine

Summary While sustainable forest management (SFM) policy processes are well developed, implementation on the ground remains a challenge. Given the diversity of biophysical conditions, economic histories and governance systems on the European continent, regionally and temporally adapted and adaptive solutions are needed for both social and ecological systems. To illustrate this, we apply (1) a biographic forest and woodland history approach to central Sweden’s Bergslagen region, where boreal sustained yield forestry was widely applied first and (2) a comparative case study approach using five European landscapes that represent different forest history phases in Scotland, Germany, Ukraine and Russia. Additionally, we illustrate the need to learn from reference landscapes for natural forest and cultural woodland systems such as in economically remote regions in Romania, Russia and on the Iberian Peninsula. We conclude that there is great opportunity for innovative knowledge production about both governance and management for different SFM dimensions based on comparisons among concrete landscapes. In addition, there is a need to develop local place-based social learning processes that are characterized by a focus on a geographical area, commitment to SFM policy visions and collaborative approaches to development that include both ecological and social systems.