Miracle-dz/UniFAR-FTUs huggingface dataset:
Proporção sexual de embriões bovinos PIV 60 D após TETF de acordo com o estágio de desenvolvimento embrionário inovulado

In view of its wide and consolidated sale of bovine embryos and because it has the world’s largest herd, Brazil currently occupies an important position in the worldwide scenario of in vitro production (IVP) of embryos. However, sex ratio deviations have been frequently reported for IVP embryos. The objective of this study was to evaluate the pregnancy rates and fetal sex of IVP bovine embryos 60 days after fixed-time embryo transfer (FTET). Nellore females (Bos taurus indicus, n=2,920) were used as oocyte donors and 30,912 crossbred cows (Bos taurus indicus x Bos taurus taurus) were used as recipients. Of these recipients, 11,341 were submitted to fetal sexing at 60 days of gestation. No difference (P>0.05) in pregnancy rate or embryo loss was observed between stages of embryo development at the time of FTET (early blastocyst, blastocyst, and expanded blastocyst). Regarding the sex of the products obtained, there was a higher percentage of male embryos in the blastocyst and expanded blastocyst stages and a higher percentage of female embryos in the early blastocyst stage. It should be noted that the results obtained for embryos in the blastocyst and expanded blastocyst stages are highly reliable, considering that a significant number of embryos in these stages were transferred. The results obtained for embryos in the early blastocyst stage should be seen with caution in view of the reduced number of embryos in this stage.
EVALUATION OF EMBRYOS DERIVED FROM IN VITRO FERTILIZED OOCYTES RECONSTRUCTED BY MEIOSIS-II CHROMOSOME TRANSPLANTATION FROM AGED MICE TO OOPLASMS OF YOUNG MICE

Background: To assess embryos derived by the transfer of meiosis-II chromosomes (M-II-t) from aged mice oocytes into ooplasms from younger mice to overcome the problem of age-related decline in female fertility. Materials and Methods: The developmental capacity, karyotype, and ultrastructure of reconstructed oocytes derived from meiosis-II chromosome transplantation from aged mice into the ooplasms of young mice by piezo-micromanipulation were assessed. Results: The survival rate of enucleated young oocytes was 54% and the percent of fertilized reconstructed oocytes was 23%. The rate of embryo development to the two-cell stage after cultivation was 40%. Since 82.4% of the analyzed embryos derived from reconstructed oocytes had condensed nuclei, it was not possible to analyze their chromosomal integrity. However, 17.6% of analyzable reconstructed old oocyte derived embryos (old-ODEs), had normal diploid sets of chromosomes. Major structural differences were not observed between young, old, and M-II-t derived two-cell embryos. Conclusion: Our findings suggested that ooplasms from younger mice may overcome ageassociated problems in older mice.
Genetic Variation in Total Carotene, Iron, and Zinc Contents of Maize and Cassava Genotypes

Deficiencies of vitamin A, iron, and zinc are widespread in sub-Saharan Africa, where the diets are mainly plant-based and the intakes of animal products are low. The overall objective of this investigation was to determine the extent of genetic variation of these micronutrients in 16 yellow-seeded improved maize varieties, 109 maize inbred lines (60 from mid-altitude and 49 from lowland/savannah agroecologies), and 162 cassava clones resistant to the cassava mosaic disease. The yellow-seeded improved maize varieties were analysed for physical and chemical characteristics and total carotene content; the maize inbred lines and cassava clones were analysed for iron and zinc content. The results showed statistically significant and large genotypic differences in total carotene content among the 16 yellow-seeded improved, open-pollinated maize varieties. The total carotene content ranged from 143 to 278 μg/g. Significant genotypic variation was also observed for iron and zinc concentrations in maize inbred lines and cassava storage roots. Iron concentration ranged from 15 to 159 ppm for mid-altitude and from 14 to 134 ppm for lowland maize inbred lines; zinc concentration ranged from 12 to 96 ppm for mid-altitude inbreds and from 24 to 96 ppm for lowland inbred lines. For cassava storage roots, the range was 4 to 95 ppm for iron and 4 to 18 ppm for zinc. A strong and positive relationship was observed between iron and zinc concentrations for both mid-altitude and lowland maize inbred lines, but this relationship was weak for the cassava clones. The potential exists for improving carotene, iron, and zinc contents in maize and cassava genotypes through plant-breeding.
Transmission Electron Microscopic Examination of the Healing Power Effect of Milled Teeth Versus Beta- Tri Calcium Phosphate Grafted in Calvarial Bone Defect in Rats.

Objectives: to evaluate the effect of milled teeth versus beta tricalcium phosphate bone graft material on new bone formation at the cell level using transmission electron microscope Materials and methods: Forty-five adult male albino rats, were divided into three main groups (n=15); control and two experimental groups. Under general anesthesia, 1.5 cm incision was done exposing the cranial bone. Then two noncritical size bone defects were created one in each parital sides of the rat calvarial bone. In Group I (control group): the bilateral calvarial bony defects were left to heal spontaneously. In Group II the bilateral calvarial bony defects completely filled with β-TCP. In Group III: the bilateral calvarial bony defects completely filled with tooth ash. Five rats from each group were sacrificed after 7, 15, and 30 days postoperatively. Results: tooth ash group: showed more new bone formation. Different types of cells appeared more active: multiple lymphocytes, fibroblast, osteoprogenitor cells, osteoblasts. Multinucleated osteoclasts with prominent vacuolated cytoplasm and ruffled border in Howship’s lacunae were clearly seen. At day 30, disappearing of the tooth ash and infiltration of different types of cells; osteoprogenitor cells, bone lining cells, and osteoblasts while β-TCP particles were still seen in the sections. Conclusion: Bone activity, formation and maturity were ahead in tooth ash filled calvarial bony defects. Tooth ash had a role in the stimulation of osteoblastic activity in matrix formation and its mineralization.
The Development of a Regression Model to Predict Object Transfer Power in Older Adults.

Castillo, DC, Strand, KL, Oh, J, Eltoukhy, M, Totillo, MC, and Signorile, JF. The development of a regression model to predict object transfer power in older adults. J Strength Cond Res XX(X): 000-000, 2020-Declines in mechanical power affect independence in older adults; however, no practical clinical method exists to assess peak power (PP) and average power (AP) during transfer tasks in this population. Therefore, predictive models were developed and validated during performance of an existing transfer assessment, the gallon-jug shelf-transfer (GJST) test. Twenty-one independent-living older women (age = 74.8 ± 5.6) and men (age = 73.8 ± 4.5) participated in the development phase. Peak power and AP were computed using data from three-dimensional movement analyses while subjects moved five 1-gallon jugs from a low (0.59 m) to high shelf (1.43 m) as quickly as possible. Stepwise linear regression models using test duration, subject height, and age produced equations with high R values for PP (0.655-0.701; p < 0.0001) and AP (0.703-0.759; p < 0.0001). However, regression and Bland-Altman analyses showed models with declining agreement as power values increased. Therefore, analyses were repeated using a quadratic model, showing stronger predictive capacity (PP: R = 0.786; AP: R = 0.878; p < 0.0001). Validity of this model was evaluated in a second sample of 30 older women (age = 69.9 ± 4.7) and men (age = 70.7 ± 4.3). Computed GJST AP and PP were compared with power produced during dominant arm chest press and distance during the seated medicine ball throw. Generalizability of these models was also confirmed through cross-validation analyses. Our results indicate mechanical power in older adults can be accurately measured using the quadratic model, with test duration as the independent variable. This model provides a simple, safe, and inexpensive assessment tool that can be administered by clinicians to improve diagnostic and therapeutic processes in older persons.
Do Different Ascertainment Techniques Identify the Same Individuals as Sarcopenic in the Canadian Longitudinal Study on Aging?

Sarcopenia is associated with poor health outcomes such as disability, institutionalization, and mortality. Efforts to manage sarcopenia clinically have been hindered by challenges in determining how to ascertain sarcopenia status correctly. The objective of this project was to assess the agreement between the different methods of ascertaining sarcopenia recommended by expert groups.
Host Synthesized Carbohydrate Antigens on Viral Glycoproteins as “Achilles’ Heel” of Viruses Contributing to Anti-Viral Immune Protection

The glycans on enveloped viruses are synthesized by host-cell machinery. Some of these glycans on zoonotic viruses of mammalian reservoirs are recognized by human natural antibodies that may protect against such viruses. These antibodies are produced mostly against carbohydrate antigens on gastrointestinal bacteria and fortuitously, they bind to carbohydrate antigens synthesized in other mammals, neutralize and destroy viruses presenting these antigens. Two such antibodies are: anti-Gal binding to α-gal epitopes synthesized in non-primate mammals, lemurs, and New World monkeys, and anti-N-glycolyl neuraminic acid (anti-Neu5Gc) binding to N-glycolyl-neuraminic acid (Neu5Gc) synthesized in apes, Old World monkeys, and many non-primate mammals. Anti-Gal appeared in Old World primates following accidental inactivation of the α1,3galactosyltransferase gene 20–30 million years ago. Anti-Neu5Gc appeared in hominins following the inactivation of the cytidine-monophosphate-N-acetyl-neuraminic acid hydroxylase gene, which led to the loss of Neu5Gc <6 million-years-ago. It is suggested that an epidemic of a lethal virus eliminated ancestral Old World-primates synthesizing α-gal epitopes, whereas few mutated offspring lacking α-gal epitopes and producing anti-Gal survived because anti-Gal destroyed viruses presenting α-gal epitopes, following replication in parental populations. Similarly, anti-Neu5Gc protected few mutated hominins lacking Neu5Gc in lethal virus epidemics that eliminated parental hominins synthesizing Neu5Gc. Since α-gal epitopes are presented on many zoonotic viruses it is suggested that vaccines elevating anti-Gal titers may be of protective significance in areas endemic for such zoonotic viruses. This protection would be during the non-primate mammal to human virus transmission, but not in subsequent human to human transmission where the virus presents human glycans. In addition, production of viral vaccines presenting multiple α-gal epitopes increases their immunogenicity because of effective anti-Gal-mediated targeting of vaccines to antigen presenting cells for extensive uptake of the vaccine by these cells.
Suppression of ovarian hormones in adolescent rats has no effect on anxiety‐like behaviour or c‐fos activation in the amygdala

In humans, sex differences in mood disorders emerge during adolescence, with prevalence rates being consistently higher in females than males. It has been hypothesised that exposure to endogenous ovarian hormones during adolescence enhances the susceptibility of females to mood disorders from this stage of life onwards. However, experimental evidence in favour of this hypothesis is lacking. In the present study, we examined the long‐term effects of suppressing adolescent gonadal hormone levels in a group of female Lister‐hooded rats via administration of a gonadotrophin‐releasing hormone antagonist (Antide; administered on postnatal day [PND] 28 and 42) compared to control females and males (n = 14 per group). We predicted that, in adulthood, Antide‐treated female rats would exhibit more male‐like behaviour than control females in novel environments (elevated‐plus maze, open field and light‐dark box), in response to novel objects and novel social partners, and in an acoustic startle task. Progesterone and luteinising hormone assays (which were conducted on blood samples collected on PND 55/56 and 69/70) confirmed that the hypothalamic‐pituitary‐gonadal axis was temporarily suppressed by Antide treatment. In addition, Antide‐treated females were found to exhibit a modest pubertal delay, as measured by vaginal opening, which was comparable in length to the pubertal delay that has been induced by adolescent exposure to alcohol or stress in previous studies of female rats. However, Antide‐treated females did not substantially differ from control females on any of the behavioural tests, despite the evidence for predicted sex differences in some measures. Following the acoustic startle response task, all subjects were culled and perfused, and c‐Fos staining was conducted in the medial and basolateral amygdala, with the results showing no significant differences in cell counts between the groups. These findings suggest that ovarian hormone exposure during adolescence does not have long‐term effects on anxiety‐related responses in female rats.
Diversity and Abundance of Microbial Communities in UASB Reactors during Methane Production from Hydrolyzed Wheat Straw and Lucerne

The use of straw for biofuel production is encouraged by the European Union. A previous study showed the feasibility of producing biomethane in upflow anaerobic sludge blanket (UASB) reactors using hydrolyzed, steam-pretreated wheat straw, before and after dark fermentation with Caldicellulosiruptor saccharolyticus, and lucerne. This study provides information on overall microbial community development in those UASB processes and changes related to acidification. The bacterial and archaeal community in granular samples was analyzed using high-throughput amplicon sequencing. Anaerobic digestion model no. 1 (ADM1) was used to predict the abundance of microbial functional groups. The sequencing results showed decreased richness and diversity in the microbial community, and decreased relative abundance of bacteria in relation to archaea, after process acidification. Canonical correspondence analysis showed significant negative correlations between the concentration of organic acids and three phyla, and positive correlations with seven phyla. Organic loading rate and total COD fed also showed significant correlations with microbial community structure, which changed over time. ADM1 predicted a decrease in acetate degraders after a decrease to pH ≤ 6.5. Acidification had a sustained effect on the microbial community and process performance.
Sympathetic innervation of inguinal white adipose tissue in the mouse

Adipose tissue plays an important role in metabolic homeostasis and its prominent role as endocrine organ is now well recognized. Adipose tissue is controlled via the sympathetic nervous system (SNS). New viral, molecular‐genetic tools will soon allow a more detailed study of adipose tissue innervation in metabolic function, yet, the precise anatomical extent of preganglionic and postganglionic inputs to the inguinal white adipose tissue (iWAT) is limited. Furthermore, several viral, molecular‐genetic tools will require the use of cre/loxP mouse models, while the available studies on sympathetic iWAT innervation were established in larger species. In this study, we generated a detailed map for the sympathetic innervation of iWAT in male and female mice. We adapted iDISCO tissue clearing to process large, whole‐body specimens for an unprecedented view of the natural abdominal SNS. Combined with pseudorabies virus retrograde tracing from the iWAT, we defined the preganglionic and postganglionic sympathetic input to iWAT. We used fluorescence‐guided anatomical dissections of sympathetic nerves in reporter mice to further clarify that postganglionic axons connect to iWAT via lateral cutaneous rami (dorsolumbar iWAT portion) and the lumbar plexus (inguinal iWAT portion). Importantly, these rami carry axons that branch to iWAT, as well as axons that travel further to innervate the skin and vasculature, and their functional impact will require consideration in denervation studies. Our study may serve as a comprehensive map for future experiments that employ virally driven neuromodulation techniques to predict anatomy‐based viral labeling.
Three New Alien Taxa for Europe and a Chorological Update on the Alien Vascular Flora of Calabria (Southern Italy)

Knowledge on alien species is needed nowadays to protect natural habitats and prevent ecological damage. The presence of new alien plant species in Italy is increasing every day. Calabria, its southernmost region, is not yet well known with regard to this aspect. Thanks to fieldwork, sampling, and observing many exotic plants in Calabria, here, we report new data on 34 alien taxa. In particular, we found three new taxa for Europe (Cascabela thevetia, Ipomoea setosa subsp. pavonii, and Tecoma stans), three new for Italy (Brugmansia aurea, Narcissus ‘Cotinga’, and Narcissus ‘Erlicheer’), one new one for the Italian Peninsula (Luffa aegyptiaca), and 21 new taxa for Calabria (Allium cepa, Asparagus setaceus, Bassia scoparia, Beta vulgaris subsp. vulgaris, Bidens formosa, Casuarina equisetifolia, Cedrus atlantica, Chlorophytum comosum, Cucurbita maxima subsp. maxima, Dolichandra unguis-cati, Fagopyrum esculentum, Freesia alba, Juglans regia, Kalanchoë delagoënsis, Passiflora caerulea, Portulaca grandiflora, Prunus armeniaca, Prunus dulcis, Solanum tuberosum, Tradescantia sillamontana, and Washingtonia filifera). Furthermore, we provide the first geolocalized record of Araujia sericifera, the confirmation of Oxalis stricta, and propose a change of status for four taxa (Cenchrus setaceus, Salpichroa origanifolia, Sesbania punicea, and Nothoscordum gracile) for Calabria. The updated knowledge on the presence of new alien species in Calabria, in Italy and in Europe could allow for the prevention of other new entries and to eliminate this potential ecological threat to natural habitats.
Analysis of Saccharomyces cerevisiae Mec1 and Rad9 functions in the DNA Damage Response

Saccharomyces cerevisiae Rad9 is required for an effective DNA damage response throughout the cell cycle. Assembly of Rad9 on chromatin after DNA damage is promoted by histone modifications that create docking sites for Rad9 recruitment, allowing checkpoint activation. Rad53 phosphorylation is also dependent upon BRCT-directed Rad9 oligomerization; however, the crosstalk between these molecular determinants and their functional significance are poorly understood. Here we report that, in the G1 and M phases of the cell cycle, both constitutive and DNA damage-dependent Rad9 chromatin association require its BRCT domains. In G1 cells, GST or FKBP dimerization motifs can substitute to the BRCT domains for Rad9 chromatin binding and checkpoint function. Conversely, forced Rad9 dimerization in M phase fails to promote its recruitment onto DNA, although it supports Rad9 checkpoint function. In fact, a parallel pathway, independent on histone modifications and governed by CDK1 activity, allows checkpoint activation in the absence of Rad9 chromatin binding. CDK1-dependent phosphorylation of Rad9 on Ser11 leads to specific interaction with Dpb11, allowing Rad53 activation and bypassing the requirement for the histone branch. Citation: Granata M, Lazzaro F, Novarina D, Panigada D, Puddu F, et al. (2010) Dynamics of Rad9 Chromatin Binding and Checkpoint Function Are Mediated by Its Dimerization and Are Cell Cycle–Regulated by CDK1 Activity. PLoS Genet 6(8): e1001047. doi:10.1371/journal.pgen. 1001047 Editor: Gregory P. Copenhaver, The University of North Carolina at Chapel Hill, United States of America Received December 24, 2009; Accepted July 2, 2010; Published August 5, 2010 Copyright: 2010 Granata et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Funding: This work was supported by grants from AIRC and Fondazione Cariplo to PP and MM-F, the European Union FP6 Integrated Project DNA repair contract number 512113 to PP and NFL, a NUIG college fellowship to RK, and a Science Foundation Ireland Principal Investigator award 07/IN1/B958 to NFL. CMA was supported by Fundação para a Ciência e a Tecnologia (SFRH/BD/42128/2007, Portugal). The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript. Competing Interests: The authors have declared that no competing interests exist. * E-mail: marco.muzifalconi@unimi.it (MM-F); paolo.plevani@unimi.it (PP) . These authors contributed equally to this work.
Effects of short-term supplementation with selenised yeast on milk production and composition of lactating cows

The work described was conducted to provide Se-fortified milk protein for cancer research using animal models by CSIRO Health Sciences and Nutrition. Sixty spring-calving cows grazing perennial pasture at a herbage allowance of 40 kg DM/cow/day were supplemented with crushed barley grain and a formulated concentrate containing selenised yeast. The effects of the selenium supplement (25 mg Se/day) on milk production, selenium concentration in milk and somatic cell counts were determined by comparison with 60 cows consuming a similar diet without the selenised yeast. There were no effects of short-term selenium supplementation on milk production, the concentrations of protein, fat or lactose in milk or on somatic cell counts. The selenium concentration in bulk milk samples increased from 10.3 to 128.3 μg/L from day 0 to day 9 of the treatment period. These results are discussed in relation to practical approaches to producing milk with enhanced selenium concentrations to meet human nutritional requirements or to be used for preventative health purposes.
MSH2 shapes the meiotic crossover landscape in relation to interhomolog polymorphism in Arabidopsis

During meiosis, DNA double‐strand breaks undergo interhomolog repair to yield crossovers between homologous chromosomes. To investigate how interhomolog sequence polymorphism affects crossovers, we sequenced multiple recombinant populations of the model plant Arabidopsis thaliana. Crossovers were elevated in the diverse pericentromeric regions, showing a local preference for polymorphic regions. We provide evidence that crossover association with elevated diversity is mediated via the Class I crossover formation pathway, although very high levels of diversity suppress crossovers. Interhomolog polymorphism causes mismatches in recombining molecules, which can be detected by MutS homolog (MSH) mismatch repair protein heterodimers. Therefore, we mapped crossovers in a msh2 mutant, defective in mismatch recognition, using multiple hybrid backgrounds. Although total crossover numbers were unchanged in msh2 mutants, recombination was remodelled from the diverse pericentromeres towards the less‐polymorphic sub‐telomeric regions. Juxtaposition of megabase heterozygous and homozygous regions causes crossover remodelling towards the heterozygous regions in wild type Arabidopsis, but not in msh2 mutants. Immunostaining showed that MSH2 protein accumulates on meiotic chromosomes during prophase I, consistent with MSH2 regulating meiotic recombination. Our results reveal a pro‐crossover role for MSH2 in regions of higher sequence diversity in A. thaliana.