Miracle-dz/UniFAR-FTUs huggingface dataset:
Fumagillin, a Mycotoxin of Aspergillus fumigatus: Biosynthesis, Biological Activities, Detection, and Applications

Fumagillin is a mycotoxin produced, above all, by the saprophytic filamentous fungus Aspergillus fumigatus. This mold is an opportunistic pathogen that can cause invasive aspergillosis, a disease that has high mortality rates linked to it. Its ability to adapt to environmental stresses through the production of secondary metabolites, including several mycotoxins (gliotoxin, fumagillin, pseurotin A, etc.) also seem to play an important role in causing these infections. Since the discovery of the A. fumigatus fumagillin in 1949, many studies have focused on this toxin and in this review we gather all the information currently available. First of all, the structural characteristics of this mycotoxin and the different methods developed for its determination are given in detail. Then, the biosynthetic gene cluster and the metabolic pathway involved in its production and regulation are explained. The activity of fumagillin on its target, the methionine aminopeptidase type 2 (MetAP2) enzyme, and the effects of blocking this enzyme in the host are also described. Finally, the applications that this toxin and its derivatives have in different fields, such as the treatment of cancer and its microsporicidal activity in the treatment of honeybee hive infections with Nosema spp. , are reviewed. Therefore, this work offers a complete review of all the information currently related to the fumagillin mycotoxin secreted by A. fumigatus, important because of its role in the fungal infection process but also because it has many other applications, notably in beekeeping, the treatment of infectious diseases, and in oncology.
The Impact of Having One Parent Absent on Children’ Food Consumption and Nutrition in China

The rapid economic and social development in the past decades has greatly increased the societal acceptance of divorce and non-marital pregnancies in China, which leads to a soaring number of single-parent children. This paper aimed to investigate the impact of having one parent absent on children’ food consumption and nutrition status. We extracted 1114 children from a longitudinal household survey data in China, all of which were observed twice. Using the Propensity Score Matching and Difference-in-Difference methods, we found that being raised by one parent does not have a negative effect on children’s food consumption and nutrition intake. On the contrary, single-parent families tend to provide more food to their children as a compensation for the absence of one parent and this compensation effect offsets the negative impact caused by declined family income. Particularly, urban, rich families had stronger compensation effect than other families with low and middle incomes.
Evaluating Alternatives to Zinc-Bacitracin Antibiotic Growth Promoter in Broilers: Physiological and Meat Quality Responses

Simple Summary In the Global South, the indiscriminate use of antibiotic growth promoters (AGP) in chicken diets continues to pose a threat to human health. However, since infectious disease burden in these regions is high, withdrawing the use of AGP without alternatives would result in proliferation of infections with serious consequences for food and nutrition security and human health. The effectiveness of different combinations of alternative feed additives (a probiotic, live Bacillus subtilis), an organic acid mixture (benzoic and fumaric acids), a protease enzyme, and chelated minerals (Cu, Zn and Mn) was assessed in broiler chickens. When fed on diets containing these alternative feed additives, broilers had similar feed utilization efficiency and growth performance as those fed on an AGP. These findings show that there is potential to replace zinc-bacitracin AGP in broiler diets with feed additives that do not promote antimicrobial resistance and thus deliver safe poultry products. Abstract This study evaluated different combinations of a probiotic (Bacillus licheniformis), an organic acid mixture (benzoic and fumaric acids), a protease enzyme, and chelated minerals (Cu, Zn, and Mn) as alternatives to zinc-bacitracin antibiotic. Eight hundred Cobb 500 chicks (42.02 ± 2.207 g liveweight) were distributed into 40 pens to which five diets: 1. Commercial broiler diet with no antibiotics (CON); 2. CON + zinc-bacitracin antibiotic (ZnB); 3. CON + chelated minerals + protease enzyme (MinEnz); 4. CON + chelated minerals + protease + organic acids (MinEnzOrg); and 5. CON + chelated minerals + protease + probiotic (MinEnzPro) were allocated. Probiotic, minerals, protease enzyme, and organic acids were included in diets at 0.2 g/kg, 0.3 g/kg, 0.5 g/kg, and 5 g/kg, respectively. Diets promoted a similar feed intake, weight gain, and feed conversion ratio. Birds on MinEnz had the highest basophil content (2.04 × 109/L), while those on ZnB had the highest alanine aminotransferase (8.50 IU/L). Chickens on MinEnz had the heaviest spleens and the largest proventriculi. Meat from CON birds had the highest water holding capacity (22.32%) and cooking losses (27.15%). We concluded that the investigated combinations of feed additives could replace ZnB in broiler diets as they promoted similar growth performance and carcass characteristics.
Flexible and Transparent Substrates Based on Gold Nanoparticles and TiO2 for in Situ Bioanalysis by Surface-Enhanced Raman Spectroscopy

Flexible and transparent substrates are emerging as low cost and easy-to-operate support for surface-enhanced Raman spectroscopy (SERS). In particular, in situ SERS detection approach for surface characterization in transmission modality can be efficiently employed for non-invasive analysis of non-planar surfaces. Here we propose a new methodology to fabricate a homogenous, transparent, and flexible SERS membrane by the assistance of a thin TiO2 porous layer deposited on the PDMS surface, which supports the uniform loading of gold nanoparticles over large area. The substrate was first characterized for homogeneity, sensitivity and repeatability using a model molecule for SERS, i.e., 7-mercapto-4-methylcoumarin. Satisfactory intra-substrate uniformity and inter-substrates repeatability was achieved, showing an RSD of 10%, and an analytical sensitivity down to 10 nM was determined with an EF of 3.4 × 105 ± 0.4 × 105. Furthermore, SERS detection of pyrimethanil (PMT), a commonly employed pesticide in crops for human consumption, was performed in situ, exploiting the optical transparency of the device, using both model surfaces and non-flat bio-samples. PMT contamination at the phytochemical concentration levels corresponding to commonly used infield doses was successfully detected on the surface of the yellow Ficus benjiamina leaves, supporting the use of this substrate for food safety in-field application.
Bloodstream Infections and Malaria as Causes of Fever among Adult Medical Patients at a Referral Hospital in Malawi

Background and Aims: In Sub-Saharan Africa management of adult patients with febrile illness consists very often of empirical antibacterial and ant malarial treatment. This study examines the frequency, species identification and antibiotic susceptibility of bacterial Original Research Article International Journal of TROPICAL DISEASE & Health, 4(2): 182-193, 2014 183 isolates from blood and determines the frequency of malaria and the proportion of verified malaria cases among presumptively treated patients at a Malawian hospital. Study Design: This is a cross-sectional survey. Place and Duration of Study: Patients were enrolled at the Medical Department of Kamuzu Central Hospital, a referral hospital in Lilongwe, Malawi, between October 2010 and March 2011. Methodology: Patients ≥18 years with an axillary temperature ≥37.5°C were included. Blood cultures, malaria rapid diagnostic tests (RDTs), thick blood smears and HIV testing were performed. Results: 180 patients (58.3% female, median age: 31 years) were enrolled. Out of 157 patients, 89 (56.7%) tested HIV positive. Bacteremia was found in 19 (10.6%) patients including 6 (31.6%) Streptococcus pneumoniae, 6 (31.6%) Escherichia coli and 5 (26.3%) Salmonella enterica (4 Salmonella enterica serotype Typhimurium and 1 Salmonella enterica serotype Typhi). S. typhimurium and E. coli isolates showed frequent resistance to chloramphenicol, ampicillin and cotrimoxazole. Ceftriaxone was given to 110 (61.1%) patients. Malaria was confirmed by positive smear and/or positive RDT(s) in 57 (31.7%) cases. Presumptive antimalarial treatment was administered to 120 (66.7%) patients, however only 54 (45%) of these tested malaria positive. Conclusion: Empirical treatment of bloodstream infections should be based on antibiotic susceptibility of common local pathogens. Clinically suspected malaria should be confirmed by using malaria diagnostic testing before treatment. The use of malaria RDTs has to be carefully supervised and adherence to test results is advisable.
Facile Preparation and Highly Efficient Catalytic Performances of Pd-Cu Bimetallic Catalyst Synthesized via Seed-Mediated Method

With the rapid development of industry, the problem of environmental pollution has become increasingly prominent. Exploring and preparing green, efficient, and low cost catalysts has become the key challenge for scientists. However, some conventional preparation methods are limited by conditions, such as cumbersome operation, high energy consumption, and high pollution. Here, a simple and efficient seed-mediated method was designed and proposed to synthesize a highly efficient bimetallic catalyst for catalyzing nitro compounds. A Pd-Cu bimetallic composite (BCM) can be prepared by synthesizing the original seed crystal of precious metal palladium, then growing the mature nanocrystalline palladium and supporting the transition metal copper. Importantly, after eight consecutive catalytic cycles, the conversion of the catalyzed 2-NA was 84%, while the conversion of the catalyzed 4-NP was still 72%. And the catalytic first order rates of 2-NA and 4-NP constants were 0.015 s−1, and 0.069 s−1, respectively. Therefore, current research of nanocomposites catalyst showed great significance for serious environmental pollution problems and the protection of living environment, providing a new idea for the preparation of new bimetallic catalytic materials.
Polarization of Macrophages in Human Adipose Tissue is Related to the Fatty Acid Spectrum in Membrane Phospholipids

Residential macrophages in adipose tissue play a pivotal role in the development of inflammation not only within this tissue, but also affect the proinflammatory status of the whole body. Data on human adipose tissue inflammation and the role of macrophages are rather scarce. We previously documented that the proportion of proinflammatory macrophages in human adipose tissue correlates closely with non-HDL cholesterol concentrations. We hypothesized that this is due to the identical influence of diet on both parameters and decided to analyze the fatty acid spectrum in cell membrane phospholipids of the same individuals as a parameter of the diet consumed. Proinflammatory and anti-inflammatory macrophages were isolated from human adipose tissue (n = 43) and determined by flow cytometry as CD14+CD16+CD36high and CD14+CD16−CD163+, respectively. The spectrum of fatty acids in phospholipids in the cell membranes of specimens of the same adipose tissue was analyzed, and the proportion of proinflammatory macrophage increased with the proportions of palmitic and palmitoleic acids. Contrariwise, these macrophages decreased with increasing alpha-linolenic acid, total n-3 fatty acids, n-3/n-6 ratio, and eicosatetraenoic acid. A mirror picture was documented for the proportion of anti-inflammatory macrophages. The dietary score, obtained using a food frequency questionnaire, documented a positive relation to proinflammatory macrophages in individuals who consumed predominantly vegetable fat and fish, and individuals who consumed diets based on animal fat without fish and nut consumption. he present data support our hypothesis that macrophage polarization in human visceral adipose tissue is related to fatty acid metabolism, cell membrane composition, and diet consumed. It is suggested that fatty acid metabolism might participate also in inflammation and the risk of developing cardiovascular disease.
A clinicopathological study of ALS with L126S mutation in the SOD1 gene presenting with isolated inferior olivary hypertrophy

We report an autopsy case of amyotrophic lateral sclerosis with L126S mutation in the superoxide dismutase 1 (SOD1) gene (SOD1). The patient was a 69‐year‐old Japanese man without relevant family history, who initially presented with slow progressive muscle weakness of the lower extremities without upper motor neuron signs, and died of respiratory failure 6 years after the onset. Neuropathological examination revealed a loss of lower motor neurons and degeneration of Clarke's column commensurate with that of the posterior spinocerebellar tract and the middle root zone of the posterior column. The primary motor area was minimally affected. Characteristic SOD1‐immunopositive neuronal intracytoplasmic inclusions, mixed with neurofilament accumulation, were present in the affected areas. Isolated inferior olivary hypertrophy was observed, but did not involve the contralateral dentate nucleus, or the ipsilateral red nucleus and central tegmental tract, where no neuronal inclusions were found. In combination with data from a previous autopsy case, this study suggests that the L126S mutation may cause focal neuronal degeneration in the brainstem.
Targeting Pseudomonas aeruginosa in the Sputum of Primary Ciliary Dyskinesia Patients with a Combinatorial Strategy Having Antibacterial and Anti-Virulence Potential

In primary ciliary dyskinesia (PCD) patients, Pseudomonas aeruginosa is a major opportunistic pathogen, frequently involved in chronic infections of the lower airways. Infections by this bacterial species correlates with a worsening clinical prognosis and recalcitrance to currently available therapeutics. The antimicrobial peptide, lin-SB056-1, in combination with the cation chelator ethylenediaminetetraacetic acid (EDTA), was previously demonstrated to be bactericidal against P. aeruginosa in an artificial sputum medium. The purpose of this study was to validate the anti-P. aeruginosa activity of such a combination in PCD sputum and to evaluate the in vitro anti-virulence effects of EDTA. In combination with EDTA, lin-SB056-1 was able to significantly reduce the load of endogenous P. aeruginosa ex vivo in the sputum of PCD patients. In addition, EDTA markedly reduced the production of relevant bacterial virulence factors (e.g., pyocyanin, proteases, LasA) in vitro by two representative mucoid strains of P. aeruginosa isolated from the sputum of PCD patients. These results indicate that the lin-SB056-1/EDTA combination may exert a dual antimicrobial and anti-virulence action against P. aeruginosa, suggesting a therapeutic potential against chronic airway infections sustained by this bacterium.
Experimental Challenges for Reduced Genomes: The Cell Model Escherichia coli

Genome reduction, as a top-down approach to obtain the minimal genetic information essential for a living organism, has been conducted with bacterial cells for decades. The most popular and well-studied cell models for genome reduction are Escherichia coli strains. As the previous literature intensively introduced the genetic construction and application of the genome-reduced Escherichia coli strains, the present review focuses the design principles and compares the reduced genome collections from the specific viewpoint of growth, which represents a fundamental property of living cells and is an important feature for their biotechnological application. For the extended simplification of the genomic sequences, the approach of experimental evolution and concern for medium optimization are newly proposed. The combination of the current techniques of genomic construction and the newly proposed methodologies could allow us to acquire growing Escherichia coli cells carrying the extensively reduced genome and to address the question of what the minimal genome essential for life is.
Fall Detection Using Multiple Bioradars and Convolutional Neural Networks

A lack of effective non-contact methods for automatic fall detection, which may result in the development of health and life-threatening conditions, is a great problem of modern medicine, and in particular, geriatrics. The purpose of the present work was to investigate the advantages of utilizing a multi-bioradar system in the accuracy of remote fall detection. The proposed concept combined usage of wavelet transform and deep learning to detect fall episodes. The continuous wavelet transform was used to get a time-frequency representation of the bio-radar signal and use it as input data for a pre-trained convolutional neural network AlexNet adapted to solve the problem of detecting falls. Processing of the experimental results showed that the designed multi-bioradar system can be used as a simple and view-independent approach implementing a non-contact fall detection method with an accuracy and F1-score of 99%.
Microtubule-Dependent Trafficking of Alphaherpesviruses in the Nervous System: The Ins and Outs

The Alphaherpesvirinae include the neurotropic pathogens herpes simplex virus and varicella zoster virus of humans and pseudorabies virus of swine. These viruses establish lifelong latency in the nuclei of peripheral ganglia, but utilize the peripheral tissues those neurons innervate for productive replication, spread, and transmission. Delivery of virions from replicative pools to the sites of latency requires microtubule-directed retrograde axonal transport from the nerve terminus to the cell body of the sensory neuron. As a corollary, during reactivation newly assembled virions must travel along axonal microtubules in the anterograde direction to return to the nerve terminus and infect peripheral tissues, completing the cycle. Neurotropic alphaherpesviruses can therefore exploit neuronal microtubules and motors for long distance axonal transport, and alternate between periods of sustained plus end- and minus end-directed motion at different stages of their infectious cycle. This review summarizes our current understanding of the molecular details by which this is achieved.
Imaging Modalities for Diagnosis of Deep Pelvic Endometriosis: Comparison between Trans-Vaginal Sonography, Rectal Endoscopy Sonography and Magnetic Resonance Imaging. A Head-to-Head Meta-Analysis

Objectives: A meta-analysis, with a head-to-head approach, was carried out to compare the three most common techniques for a deep pelvic endometriosis (DPE) diagnosis. We focused on: transvaginal-sonography (TVS), magnetic-resonance imaging (MRI), and rectal-endoscopy-sonography (RES). Methods: Electronic databases were searched from their inception until December 2018. All prospective and well-defined retrospective studies carried out in tertiary referral centers were considered. This review was reported following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) and Synthesizing Evidence from Diagnostic Accuracy Tests (SEDATE) guidelines. We considered only papers in which at least two imaging modalities were compared in the same set of patients (head-to-head approach). Meta-analysis of diagnostic test accuracy (DTA) was performed separately for each location of interest. Bivariate or univariate approach has been applied when appropriate. We analyze the DTA of TVS vs. MRI, TVS vs. RES, and MRI vs. RES. Results: Our meta-analysis (17 studies included) showed high-to-moderate DTA of TVS for all endometriosis locations (apart from recto-vaginal septum (RVS)) that were not statistically different from MRI and RES for those localized in the posterior compartment. RES results were more accurate than MRI for RS lesions but less accurate than TVS for other pelvic locations, except for RVS. Conclusions: All approaches provide good accuracy with specific strong points. Ultrasonography demonstrated a diagnostic accuracy not inferior to MRI and RES; therefore, it must be considered the primary approach for DPE diagnosis. MRI has to be considered as a valuable approach in settings where highly skilled sonographers are not available. Keypoints: (1) We confirmed the non-inferiority of TVS compared to MRI and RES for the diagnosis of specific pelvic anatomic location of endometriosis lesions. (2) Ultrasonography could be considered the primary approach for DPE diagnosis (less invasive than RES and less expensive than MRI). (3) MRI has to be considered as a valuable approach in settings where skilled sonographers are not available.
Is targeted biopsy really needed when performing systematic prostate biopsy to raise the detection rate for prostate cancer in patients with prostate-specific antigen ≤10 ng/mL?

Abstract Targeted biopsy with multiparametric magnetic resonance imaging and hypoechoic lesions on transrectal ultrasound has been implemented to increase prostate cancer detection rate. We compared the detection abilities of systematic prostate biopsy, hypoechoic lesion-targeted biopsy (HL-TBx), and cognitive magnetic resonance imaging-targeted biopsy (MRI-TBx) in patients with suspected prostate cancer. Between September 2014 and August 2016, 193 patients with a prostate-specific antigen level of 3 to 10 ng/mL underwent HL-TBx or MRI-TBx. In patients who refused magnetic resonance imaging examination before prostate biopsy, HL-TBx was performed. We compared cancer detection rates and pathologic outcomes between systematic prostate biopsy and HL-TBx or MRI-TBx. The cancer detection rates for HL-TBx and MRI-TBx were 40.8% and 43.8%, respectively, without a significant difference (P = .683). Of the 81 patients diagnosed with prostate cancer, most patients (77 patients, 95.1%) were diagnosed with prostate cancer by systematic prostate biopsy. The detection ability for prostate cancer was significantly better for systematic prostate biopsy than for HL-TBx or MRI-TBx (P < .001). The detection abilities for clinically significant prostate cancer similar between HL-TBx and systematic prostate biopsy. Systematic prostate biopsy alone should be recommended for detection prostate cancer in patients with a prostate-specific antigen ≤10 ng/mL.
Graphene Oxide@3D Hierarchical SnO2 Nanofiber/Nanosheets Nanocomposites for Highly Sensitive and Low-Temperature Formaldehyde Detection

In this work, we reported a formaldehyde (HCHO) gas sensor with highly sensitive and selective gas-sensing performance at low operating temperature based on graphene oxide (GO)@SnO2 nanofiber/nanosheets (NF/NSs) nanocomposites. Hierarchical SnO2 NF/NSs coated with GO nanosheets showed enhanced sensing performance for HCHO gas, especially at low operating temperature. A series of characterization methods, including X-ray diffraction (XRD), Field emission scanning electron microscopy (FE-SEM), Transmission electron microscope (TEM), X-ray photoelectron spectroscopy (XPS) and Brunauer–Emmett–Teller (BET) were used to characterize their microstructures, morphologies, compositions, surface areas and so on. The sensing performance of GO@SnO2 NF/NSs nanocomposites was optimized by adjusting the loading amount of GO ranging from 0.25% to 1.25%. The results showed the optimum loading amount of 1% GO in GO@SnO2 NF/NSs nanocomposites not only exhibited the highest sensitivity value (Ra/Rg = 280 to 100 ppm HCHO gas) but also lowered the optimum operation temperature from 120 °C to 60 °C. The response value was about 4.5 times higher than that of pure hierarchical SnO2 NF/NSs (Ra/Rg = 64 to 100 ppm). GO@SnO2 NF/NSs nanocomposites showed lower detection limit down to 0.25 ppm HCHO and excellent selectivity against interfering gases (ethanol (C2H5OH), acetone (CH3COCH3), methanol (CH3OH), ammonia (NH3), methylbenzene (C7H8), benzene (C6H6) and water (H2O)). The enhanced sensing performance for HCHO was mainly ascribed to the high specific surface area, suitable electron transfer channels and the synergistic effect of the SnO2 NF/NSs and GO nanosheets network.