Miracle-dz/UniFAR-FTUs huggingface dataset:
Boosting Gabor Feature Classifier for Face Recognition Using Random Subspace

Gabor feature has been widely viewed as a good representation method for face recognition. AdaBoost is an excellent machine learning technique. Learning Gabor feature based classifier using AdaBoost is one of the best face recognition algorithms. However, dimensionality of Gabor feature space usually is very high, which makes the training program need huge memory or else take a very long time to run. In this paper, we propose a method which not only can solve the problem but also can improve recognition accuracy. Several subspaces with moderate size are randomly generated from original high dimensional Gabor feature space. Then strong classifier is trained in every random subspace (T. Kam Ho, 1998) respectively and the outputs of multiple classifiers are combined in the final decision. Experimental results demonstrate that the method saves a great amount of training time, and achieves an exciting recognition rate of 97.91% on the FERET Fb test set
A SOM algorithm based procedure for MRI image processing under significant Rician noise

In this paper, a self-organizing map (SOM) based procedure is proposed for MRI image processing. Such images are usually corrupted by Rician noise generated during the image formation processing due to the nature of MRI technique. Rician noise is non-additive, signal dependent, and highly nonlinear, significantly different from those commonly discussed in images. These features make it very difficult to separate the signal from noise. A SOM algorithm is carefully applied to accurate MRI image processing by taking the decent Rician noise feature into consideration, resulting in a novel procedure for denosing and segmentation. The procedure is intuitively developed and justified, and demonstrated using simulation examples on a typical knee cartilage MRI image.
Comparing Flickr tags to a geomorphometric classification

User Generated Content (UGC), for example, in the form of geotagged Flickr images provides us with new ways to explore the naive geography of landforms. Here, we compare descriptions elicited from Flickr tags to a geomorphometric classification based on slope, convexity and texture. Slope appears to influence tags most, with tags describing more natural objects being used more in steeper areas. Whilst these results are perhaps not surprising, they suggest that UGC has potential for collecting more nuanced data which will allow us to explore more qualitatively the way in which landscapes are described.
RAC 1 activity and intracellular ROS modulate the migratory potential of MCF-7 cells through a NADPH oxidase and NF j B-dependent mechanism

In the present study, we demonstrated that changes in Rac1 activity associated with the production of intracellular ROS modulate the migratory properties in MCF-7 and T47D human mammary cell lines. We also described that the NFjB pathway exerts a downstream control on the expression of the ROS-dependent cellular migratory potential. These results emphasize the importance of redox balance in the acquisition of malignancy and support previous data sustaining that an oxidative environment predisposes cells to activate signal-transduction pathways actively involved in cellular oncogenesis. Our data also provides evidence that NADPH oxidase could constitute the main source of intracellular ROS in response to changes in Rac1 activity. We suggest that Rac1 plays a role in cellular migration not only limited to its known function in reorganization of the actin cytoskeleton, but also as part of the intracellular machinery that controls the redox balance.
A randomized protocol for signing contracts

Randomized protocols for signing contracts, certified mail, and flipping a coin are presented. The protocols use a 1-out-of-2 oblivious transfer subprotocol which is axiomatically defined. The 1-out-of-2 oblivious transfer allows one party to transfer exactly one secret, out of two recognizable secrets, to his counterpart. The first (second) secret is received with probability one half, while the sender is ignorant of which secret has been received. An implementation of the 1-out-of-2 oblivious transfer, using any public key cryptosystem, is presented.
Simple, rapid and accurate genotyping-by-sequencing from aligned whole genomes with ArrayMaker

SUMMARY Whole-genome sequencing has revolutionized the study of genetics. Genotyping-by-sequencing is now a viable method of genotyping, yet the bioinformatics involved can be daunting if not prohibitive for some laboratories. Here we present ArrayMaker, a user-friendly tool that extracts accurate single nucleotide polymorphism genotypes at pre-defined loci from whole-genome alignments and presents them in a standard genotyping format compatible with association analysis software and datasets genotyped on commercial array platforms. Using this tool, geneticists with only basic computing ability can genotype samples at any desired list of markers, facilitating genome-wide association analysis, fine mapping, candidate variant assessment, data sharing and compatibility of data sourced from multiple technologies. AVAILABILITY AND IMPLEMENTATION ArrayMaker is licensed under The MIT License and can be freely obtained at https://github.com/cw2014/ArrayMaker/. The program is implemented in Perl and runs on Linux operating systems. SUPPLEMENTARY INFORMATION Supplementary data are available at Bioinformatics online. CONTACT cali.willet@sydney.edu. au.
FOG Random Drift Signal Denoising Based on the Improved AR Model and Modified Sage-Husa Adaptive Kalman Filter

In order to reduce the influence of fiber optic gyroscope (FOG) random drift error on inertial navigation systems, an improved auto regressive (AR) model is put forward in this paper. First, based on real-time observations at each restart of the gyroscope, the model of FOG random drift can be established online. In the improved AR model, the FOG measured signal is employed instead of the zero mean signals. Then, the modified Sage-Husa adaptive Kalman filter (SHAKF) is introduced, which can directly carry out real-time filtering on the FOG signals. Finally, static and dynamic experiments are done to verify the effectiveness. The filtering results are analyzed with Allan variance. The analysis results show that the improved AR model has high fitting accuracy and strong adaptability, and the minimum fitting accuracy of single noise is 93.2%. Based on the improved AR(3) model, the denoising method of SHAKF is more effective than traditional methods, and its effect is better than 30%. The random drift error of FOG is reduced effectively, and the precision of the FOG is improved.
Learning to Solve Arithmetic Word Problems with Verb Categorization

This paper presents a novel approach to learning to solve simple arithmetic word problems. Our system, ARIS, analyzes each of the sentences in the problem statement to identify the relevant variables and their values. ARIS then maps this information into an equation that represents the problem, and enables its (trivial) solution as shown in Figure 1. The paper analyzes the arithmetic-word problems “genre”, identifying seven categories of verbs used in such problems. ARIS learns to categorize verbs with 81.2% accuracy, and is able to solve 77.7% of the problems in a corpus of standard primary school test questions. We report the first learning results on this task without reliance on predefined templates and make our data publicly available. 1
“They never listen”: towards a grounded theory of the role played by trusted adults in the spiritual lives of children

This qualitative study addresses the lack of research into the role of trusted adults in the spiritual lives of children. Semi-structured interviews were conducted with nine children from a British primary school and the data analysed using a grounded theory approach. Six categories were identified outlining the reciprocal relationship of unavailability and withholding between children and their trusted adults and how children made sense of spirituality in the absence of explicit guidance. It was found that the children had little opportunity for negotiating a shared understanding or experience of spirituality with adults and, as a result, either preserved an isolated and secret sense of spirituality or accepted what they observed to be their trusted adults' stance. The practical and theoretical implications of the children's responses in the absence of trusted adults are discussed and recommendations are made for practice and future research.
Compressing polygon mesh geometry with parallelogram prediction

We present a generalization of the geometry coder by Touma and Gotsman (1998) to polygon meshes. We let the polygon information dictate where to apply the parallelogram rule that they use to predict vertex positions. Since polygons tend to be fairly planar and fairly convex, it is beneficial to make predictions within a polygon rather than across polygons. This, for example, avoids poor predictions due to a crease angle between polygons. Up to 90 percent of the vertices can be predicted this way. Our strategy improves geometry compression by 10 to 40 percent depending on (a) how polygonal the mesh is and (b) on the quality (planarity/convexity) of the polygons.
Optimized Encodings for Consistent Query Answering via ASP from Different Perspectives

A data integration system provides transparent access to different data sources by suitably combining their data, and providing the user with a unified view of them, called global schema. However, source data are generally not under the control of the data integration process, thus integrated data may violate global integrity constraints even in presence of locally-consistent data sources. In this scenario, it may be anyway interesting to retrieve as much consistent information as possible. The process of answering user queries under global constraint viola- tion is called consistent query answering (CQA). Several notions of CQA have been proposed, e.g. depending on whether the information in the database is as- sumed to be sound or complete. This paper provides a contribution in this setting; it uniforms solutions coming from different perspectives under a common core and provides some optimizations designed to identify and isolate the inefficient part of the computation of consistent answers. The effectiveness of the approach is evidenced by experimental results reported in the paper.
Using Program Analysis to Synthesize Sensor Spoofing Attacks

In a sensor spoofing attack, an adversary modifies the physical environment in a certain way so as to force an embedded system into unwanted or unintended behaviors. This usually requires a thorough understanding of the system's control logic. The conventional methods for discovering this logic are manual code inspection and experimentation. In this paper, we design a directed, compositional symbolic execution framework that targets software for the popular MSP430 family of microcontrollers. Using our framework, an analyst can generate traces of sensor readings that will drive an MSP430-based embedded system to a chosen point in its code. As a case study, we use our system to generate spoofed wireless signals used as sensor inputs into AllSee, a recently proposed low-cost gesture recognition system. We then experimentally confirm that AllSee recognizes our adversarially synthesized signals as "gestures. "
The Maven repository dataset of metrics, changes, and dependencies

We present the Maven Dependency Dataset (MDD), containing metrics, changes and dependencies of 148,253 jar files. Metrics and changes have been calculated at the level of individual methods, classes and packages of multiple library versions. A complete call graph is also presented which includes call, inheritance, containment and historical relationships between all units of the entire repository. In this paper, we describe our dataset and the methodology used to obtain it. We present different conceptual views of MDD and we also describe limitations and data quality issues that researchers using this data should be aware of.
Classification of Minor Stroke: Intra- and Inter-Observer Reliability

Background: The Oxfordshire Community Stroke Project (OCSP) and Trial of ORG 10172 in Acute Stroke Treatment (TOAST) classifications are widely used for the assessment of major ischaemic stroke. We explored their intra- and inter-observer reliability in the classification of outpatient minor stroke. Methods: Four physicians of differing seniority and training backgrounds classified minor stroke using clinical data from 90 patients. Results: For both the OCSP and TOAST classifications, the intra-observer reliability varied from moderate to excellent (κ = 0.48–0.83). The inter-observer reliability was good (κ = 0.64) for the OCSP and moderate (κ = 0.42) for the TOAST. Thus, neither classification was consistently reliable. Conclusions: Our results may reflect the limited validity of these classifications in a typical minor stroke outpatient population and variable observer expertise.
Effectiveness and safety of dabigatran versus acenocoumarol in ‘real-world’ patients with atrial fibrillation

Aims Randomized trials showed non-inferior or superior results of the non-vitamin-K-antagonist oral anticoagulants (NOACs) compared with warfarin. The aim of this study was to assess the effectiveness and safety of dabigatran (direct thrombin inhibitor) vs. acenocoumarol (vitamin K antagonist) in patients with atrial fibrillation (AF) in daily clinical practice. Methods and results In this observational study, we evaluated all consecutive patients who started anticoagulation because of AF in our outpatient clinic from 2010 to 2013. Data were collected from electronic patient charts. Primary outcomes were stroke or systemic embolism and major bleeding. Propensity score matching was applied to address the non-randomized design. In total, 920 consecutive AF patients were enrolled (442 dabigatran, 478 acenocoumarol), of which 2 × 383 were available for analysis after propensity score matching. Mean follow-up duration was 1.5 ± 0.56 year. The mean calculated stroke risk according to the CHA2DS2-VASc score was 3.5%/year in dabigatran vs. 3.7%/year acenocoumarol-treated patients. The actual incidence rate of stroke or systemic embolism was 0.8%/year [95% confidence interval (CI): 0.2–2.1] vs. 1.0%/year (95% CI: 0.4–2.1), respectively. Multivariable analysis confirmed this lower but non-significant risk in dabigatran vs. acenocoumarol after adjustment for the CHA2DS2-VASc score [hazard ratio (HR)dabigatran = 0.72, 95% CI: 0.20–2.63, P = 0.61]. According to the HAS-BLED score, the mean calculated bleeding risk was 1.7%/year in both groups. Actual incidence rate of major bleeding was 2.1%/year (95% CI: 1.0–3.8) in the dabigatran vs. 4.3%/year (95% CI: 2.9–6.2) in acenocoumarol. This over 50% reduction remained significant after adjustment for the HAS-BLED score (HRdabigatran = 0.45, 95% CI: 0.22–0.93, P = 0.031). Conclusion In ‘real-world’ patients with AF, dabigatran appears to be as effective, but significantly safer than acenocoumarol.
Simultaneous water and lipid suppression for in vivo brain spectroscopy in humans

A method to achieve simultaneous water and lipid suppression is described. The key feature of the new dual suppression technique is the use of the well‐known hyperbolic secant (HS) waveform as a 90° saturation pulse. Two HS pulses with opposite frequency offsets are employed either sequentially or simultaneously to saturate resonance frequencies corresponding to water and lipid, while leaving the target spins untouched. The excitation bandwidth is controlled by the frequency sweep and offset of each pulse, while varying the pulse length controls the transition bandwidth. An example of the use of the dual saturation method in in vivo magnetic resonance spectroscopic imaging of the human brain is presented. Magn Reson Med, 2005. © 2005 Wiley‐Liss, Inc.
Study of Titan’s Upper and Lower Atmosphere : An Experimental Approach

Titan is the only moon in the SolarSystem to possess its own dense and gravitationallybound atmosphere, and is even larger than planetMercury. Its rocky diameter is a mere 117 km shy ofGanymede’s. If we were to scoop up a 1 cm3 sam-ple from Titan’s upper atmosphere, we would findtwo dominant molecules: molecular nitrogen N2 andmethane CH4. Should we look a bit more carefully,we would find many neutral molecules and positiveand negative ion compounds. These chemical speciesare the outcome of processes resulting from ener-getic radiation reaching Titan’s upper atmosphere,breaking apart the initial N2 and CH4. A cascadeof subsequent reactions will trigger the formationof new gas phase products more and more com-plex. Eventually, these products mainly contain-ing hydrogen, carbon and nitrogen will form largefractal aggregates composing the opaque haze en-shrouding the surface of Titan. This haze is whatgives Titan such a unique brownish hue. Most ofthe photochemically-produced volatiles will eventu-ally condense in the lower atmosphere, where theymay aggregate to form micrometer-sized icy parti-cles and clouds. During my PhD, I have focusedmy studies on (i) the gas phase reactivity of aerosolprecursors in experimental conditions analogous toTitan’s upper atmosphere (Chapters 3 & 4), and (ii)the end of life of some of the products as they con-dense in the lower and colder atmosphere (Chapter5). I used two experiments to address these respec-tive issues: the PAMPRE plasma reactor, located atLATMOS, UVSQ, Guyancourt, France, and the Ac-quabella chamber at the Jet Propulsion Laboratory,California Institute of Technology, Pasadena, USA.In this manuscript, I present my work on the neutraland positive ion reactivity in the PAMPRE plasmadischarge, as well as ice photochemistry results usinglaser irradiation in near-UV wavelengths.
Connectivity of the Primate Superior Colliculus Mapped by Concurrent Microstimulation and Event-Related fMRI

Background Neuroanatomical studies investigating the connectivity of brain areas have heretofore employed procedures in which chemical or viral tracers are injected into an area of interest, and connected areas are subsequently identified using histological techniques. Such experiments require the sacrifice of the animals and do not allow for subsequent electrophysiological studies in the same subjects, rendering a direct investigation of the functional properties of anatomically identified areas impossible. Methodology/Principal Findings Here, we used a combination of microstimulation and fMRI in an anesthetized monkey preparation to study the connectivity of the superior colliculus (SC). Microstimulation of the SC resulted in changes in the blood oxygenation level-dependent (BOLD) signals in the SC and in several cortical and subcortical areas consistent with the known connectivity of the SC in primates. Conclusions/Significance These findings demonstrates that the concurrent use of microstimulation and fMRI can be used to identify brain networks for further electrophysiological or fMRI investigation.
Packet Centric vs. Radio Centric Link Layer Approaches: A Quantitative Analysis

A well-known concept to adapt the transmitted pay- load to the current channel capacity is to perforin segmentation of the uncoded user payload. A new cross layer approach to hybrid ARQ was introduced that performs first channel coding and then segmentation of coded bits. In this paper, we denote the traditional approach as radio centric, while the latter is denoted as packet centric. By changing the order of coding and segmentation, it is possible to overcome the conflicting first requirements of link adaptation and hybrid ARQ in terms of packet size. Although the packet centric concept is not introduced here for the first time, a detailed performance analysis has been lacking so far. This paper presents a study that explores the characteristics of the packet centric approach in more detail and provides performance results and a comparison with the traditional approach. The new method is compared to the radio centric approach by means of a theoretical model and a cellular network simulator. It is shown that users with a weak channel can benefit from the former, leading to some gain in capacity.
Embryonic markers of cone differentiation

Purpose Photoreceptor cells are born in two distinct phases of vertebrate retinogenesis. In the mouse retina, cones are born primarily during embryogenesis, while rod formation occurs later in embryogenesis and early postnatal ages. Despite this dichotomy in photoreceptor birthdates, the visual pigments and phototransduction machinery are not reactive to visual stimulus in either type of photoreceptor cell until the second postnatal week. Several markers of early cone formation have been identified, including Otx2, Crx, Blimp1, NeuroD, Trβ2, Rorβ, and Rxrγ, and all are thought to be involved in cellular determination. However, little is known about the expression of proteins involved in cone visual transduction during early retinogenesis. Therefore, we sought to characterize visual transduction proteins that are expressed specifically in photoreceptors during mouse embryogenesis. Methods Eye tissue was collected from control and phosducin-null mice at embryonic and early postnatal ages. Immunohistochemistry and quantitative reverse transcriptase-PCR (qPCR) were used to measure the spatial and temporal expression patterns of phosducin (Pdc) and cone transducin γ (Gngt2) proteins and transcripts in the embryonic and early postnatal mouse retina. Results We identified the embryonic expression of phosducin (Pdc) and cone transducin γ (Gngt2) that coincides temporally and spatially with the earliest stages of cone histogenesis. Using immunohistochemistry, the phosducin protein was first detected in the retina at embryonic day (E)12.5, and cone transducin γ was observed at E13.5. The phosducin and cone transducin γ proteins were seen only in the outer neuroblastic layer, consistent with their expression in photoreceptors. At the embryonic ages, phosducin was coexpressed with Rxrγ, a known cone marker, and with Otx2, a marker of photoreceptors. Pdc and Gngt2 mRNAs were detected as early as E10.5 with qPCR, although at low levels. Conclusions Visual transduction proteins are expressed at the earliest stages in developing cones, well before the onset of opsin gene expression. Given the delay in opsin expression in rods and cones, we speculate on the embryonic function of these G-protein signaling components beyond their roles in the visual transduction cascade.
Testing non-wearable fall detection methods in the homes of older adults

In this paper, we describe two longitudinal studies in which fall detection sensor technology was tested in the homes of older adults. The first study tested Doppler radar, a two-webcam system, and a depth camera system in ten apartments for two years. This continuous data collection allowed us to investigate the real-world setting of target users and compare the advantages and limitations of each sensor modality. Based on this study, the depth camera was chosen for a current ongoing study in which depth camera systems have been installed in 94 additional older adult apartments. We include a discussion of the different sensor systems, the pros and cons of each, and results of the fall detection and false alarms in the older adult homes.