Miracle-dz/UniFAR-FTUs huggingface dataset:
Retinal Neurovascular Impairment in Patients with Essential Hypertension: An Optical Coherence Tomography Angiography Study

Purpose To investigate retinal neurovascular structural changes in patients with essential hypertension. Methods This observational cross-sectional study consisted of 199 right eyes from 169 nondiabetic essential hypertensive patients, divided into groups as follows: group A, 113 patients with hypertensive retinopathy (HTNR); group B, 56 patients without HTNR; and a control group of 30 healthy subjects. Peripapillary retinal nerve fiber layer (RNFL), radial peripapillary segmented (RPC), ganglion cell–inner plexiform layer (GC-IPL), and superficial (SVP) and deep (DVP) vascular plexus density at the macula (6 × 6 mm2) were measured by optical coherence tomography angiography (OCTA). Results DVP density was significantly reduced in groups A and B compared to the control group (group A DVP, P = 0.001; group B DVP P = 0.002). GC-IPL, RNFL thickness, and RPC and SVP density in group A were significantly decreased compared to the control group or group B (all P < 0.05). In hypertensive patients, GC-IPL and RNFL thickness were negatively correlated with severity of HTNR (GC-IPL, r = –0.331, P < 0.001; RNFL, r = –0.583, P < 0.001) and level of home blood pressure monitoring (HBPM) (GC-IPL, r = –0.160, P = 0.050; RNFL, r = –0.282, P = 0.001) and were positively correlated with SVP (GC-IPL, r = 0.267, P = 0.002; RNFL, r = 0.361, P < 0.001) and RPC density (GC-IPL, r = 0.298, P < 0.001; RNFL, r = 0.663, P < 0.001). Among subjects with grade 2 or 3 retinopathy, the superior RNFL was significantly thinner in patients with high HBPM level than in those with normal HBPM level (grade 2, P = 0.016; grade 3, P = 0.006). Conclusions Reduction of retinal vessel density and RNFL thickness is observed in patients with HTNR and is inversely associated with level of HBPM.
Risk of Breast Cancer in Women with Mastitis: A Retrospective Population-Based Cohort Study

Background and objectives: Breast cancer is a common cancer in women and has been the fourth leading cause of death in Taiwanese women. Risk factors for breast cancer include family history of breast cancer, genetic factors, and not breastfeeding. Several studies have reported an association between repeated inflammation at a young age, especially among lactating women, and cancer; however, the number of studies about the association of mastitis and breast cancer in nonlactating women is still limited. Therefore, the aim of this study was to determine the relationship between mastitis in women aged ≥40 years and breast cancer. Materials and Methods: This was a retrospective cohort study design. The data source was the Longitudinal Health Insurance Database 2010 (LHID 2010), comprising data collected by Taiwan’s National Health Insurance program. Cases of newly diagnosed mastitis in women aged ≥40 years (ICD-9-CM code = 611.0) were selected from the years 2010 to 2012. Women not diagnosed with mastitis were selected as the control group, and their data for the years 2009 to 2013 were obtained through the database. In addition, the non-mastitis group was matched 1:10 by age. Results: A total of 8634 participants were selected from the LHID 2010, which included 734 cases with mastitis and 7900 cases without mastitis. After adjustment for age, hypertension, hyperlipidemia, diabetes, hypothyroidism, and autoimmune diseases, the Cox proportional hazard model showed that patients with mastitis had a higher risk of breast cancer (aHR = 3.71, 95% CI = 1.9–7.02) compared with the non-mastitis group. The Kaplan–Meier curve also showed that women with mastitis had a higher risk of developing breast cancer. Conclusions: This study confirmed that women with mastitis have a higher risk of developing breast cancer. Therefore, women aged ≥40 years could reduce breast cancer risk by taking precautions to prevent mammary gland infection and mastitis.
Mir-193b Regulates the Differentiation, Proliferation, and Apoptosis of Bovine Adipose Cells by Targeting the ACSS2/AKT Axis

Simple Summary Several studies have shown that miR-193b plays an important role in preadipocyte differentiation. Herein, we explored the role of bta-miR-193b in adipocyte development, using EdU, flow cytometry, CCK-8, RT-qPCR, Western blotting, and oil red O staining. The result showed that bta-miR-193b could regulate the proliferation, differentiation and apoptosis of adipocytes. The dual-fluorescent reporter vector experiments showed that bta-miR-193b directly targeted ACSS2, and the regulatory function of ACSS2 is opposite to that of miR-193b. Meanwhile, we demonstrated that ACSS2 could significantly promote the expression of AKT and pAKT proteins. In conclusion, our research provides new insights that confirm that bta-miR-193b inhibits bovine adipose cell proliferation, and promotes apoptosis by negative regulation of the ACSS2/AKT pathway. Abstract The precise functions and molecular mechanisms of microRNAs (miRNAs) in adipocytes are primarily unknown. Studies have demonstrated that miR-193b plays a pivotal role in the differentiation of preadipocytes. Herein, we evaluated the effects of bta-miR-193b on the growth and development of adipocytes, using the EdU cell proliferation method, flow cytometry analysis, CCK-8 assay, RT-qPCR, Western blotting, and oil red O staining. We observed that the overexpression of bta-miR-193b significantly affected the differentiation, proliferation, and apoptosis of adipocytes. The results of the dual-fluorescent reporter vector experiments demonstrated that bta-miR-193b directly targeted Acyl-CoA synthetase short-chain family member 2 (ACSS2). Additionally, the effects of ACSS2 overexpression on the proliferation and apoptosis in adipose cells were the opposite of those induced by bta-miR-193b. We also demonstrated that ACSS2 can significantly promote the expression of AKT and pAKT proteins. Therefore, this study presents a novel mechanism by which bta-miR-193b regulates adipocyte development by targeting ACSS2.
Benthic community responses to invasion by the golden mussel, Limnoperna fortunei Dunker: biotic homogenization vs environmental driving forces

Abstract. The goal of our study was to investigate the interaction between the invasive mussel Limnoperna fortunei and benthic invertebrate communities at different spatial scales and under different environmental conditions. We analyzed the effects of L. fortunei on benthic invertebrate communities at different downstream distances (meters) from mussel beds and compared these trends in 2 rivers characterized by dissimilar chemical disturbance levels. In areas distant from L. fortunei beds, invertebrate composition at the 2 rivers differed strongly, probably in response to different levels of environmental pollution. In areas near L. fortunei beds, invertebrate composition at the 2 rivers was similar, suggesting that golden mussels have strong homogenizing effects on faunal makeup. We also found that facilitation was species specific and, in contrast to the general paradigm, weaker (rather than stronger) under more stressful conditions. Our results show that understanding the effects of L. fortunei requires accounting for scale- and species-specific effects.
The Role of Competition in Plant Communities in Arid and Semiarid Regions

The importance, and even the existence, of competition among plants in arid ecosystems has often been questioned. An influential statement of Shreve (113) asserted that interspecific competition does not occur in deserts, and Went (145) denied that competition between desert plants occurs at all. Neither provided evidence for his assertions, although Shreve pointed out the diversity of habits and phenologies found among desert species. He may have been responding to the strong emphasis placed on competition by Clements and his followers (e.g. 27). The importance of competition in natural communities has recently been debated (28, 109, 127). These reviews suggested that terrestrial plant communities are among the communities in which competition is relatively important. However, the majority of studies upon which this conclusion is based were made in humid regions. Grime (53) suggested that competition is less important in "high stress" habitats (in which he included dry habitats), but he presented little evidence from true arid or semiarid environments. This paper reviews the available evidence for competition in plant communities in arid and semiarid regions; as is demonstrated, competition certainly occurs in these communities and involves many different species. In several instances it appears to be important in the determination of community structure. Competition may be less frequent in these communities, though not less important on that account. This review also addresses several other questions concerning the role of competition in these communities, including: the role of competition in determining the absence, or presence and abundance, of species in a community, and their spatial arrangement; which
Modeling diadromous fish loss from historical data: Identification of anthropogenic drivers and testing of mitigation scenarios

Diadromous fishes have drastically declined over the last century, especially in Europe. Several authors have highlighted the role of large dams in this decline, but in fact, its causes are potentially multiple and cumulative, including degradation of local environmental conditions and widespread fragmentation of hydrographic networks associated with the pervasive establishment of smaller barriers. Consequently, there is a need to improve the identification and prioritization of the drivers of diadromous species loss in order to identify and apply the most appropriate conservation and restoration measures. In this study, we used both historical sources (from mid-18th to early 20th century) and current data to quantify the long-term loss of diadromous taxa over 555 sites throughout the French river network. Then, we modeled the effects of several anthropogenic pressures (e.g. barriers, water quality, hydrological and river morphological alterations) on diadromous taxon loss. Lastly, we assessed the potential consequences of four different scenarios of anthropogenic pressure reduction. Due to uncertainties in historical sources, some species were grouped into taxa leading to a potential underestimation of actual species extinctions. Despite this limitation, our results showed that the decline in diadromous assemblages is widespread but with contrasting magnitudes depending on site locations. The maximum height and density of barriers appeared as the major factors of taxon loss. Over the scenarios tested, we observed that exclusively improving local conditions have much more limited effects than restoring river continuity. Focusing actions on large dam removal did not show the strongest responses compared to removing medium and small-sized barriers. For effective and sustainable restoration of diadromous fish assemblage, (1) historical occurrences of diadromous fishes should be used as an indicator for assessing recovery, and (2) undertaken measures must be adapted to each basin to target and limit the number of barriers to remove while allowing diadromous fish recovery.
Knowledge Graph Convolutional Networks for Recommender Systems

To alleviate sparsity and cold start problem of collaborative filtering based recommender systems, researchers and engineers usually collect attributes of users and items, and design delicate algorithms to exploit these additional information. In general, the attributes are not isolated but connected with each other, which forms a knowledge graph (KG). In this paper, we propose Knowledge Graph Convolutional Networks (KGCN), an end-to-end framework that captures inter-item relatedness effectively by mining their associated attributes on the KG. To automatically discover both high-order structure information and semantic information of the KG, we sample from the neighbors for each entity in the KG as their receptive field, then combine neighborhood information with bias when calculating the representation of a given entity. The receptive field can be extended to multiple hops away to model high-order proximity information and capture users' potential long-distance interests. Moreover, we implement the proposed KGCN in a minibatch fashion, which enables our model to operate on large datasets and KGs. We apply the proposed model to three datasets about movie, book, and music recommendation, and experiment results demonstrate that our approach outperforms strong recommender baselines.
A study of the diversity and geographical variation in numbers of leg-bearing segments in centipedes (Chilopoda: Geophilomorpha) in north-western Europe

Five species of geophilomorphs, Strigamia maritima (Leach, 1817), Geophilus flavus (De Geer, 1778), Geophilus truncorum Bergsoe and Meinert, 1866, Geophilus proximus C. L. Koch, 1847, and Pachymerium ferrugineum (C. L. Koch, 1835), from various sample sites in north-western Europe were examined for numbers of leg-bearing segments. Where data was adequate, mean segment numbers were correlated with latitudinal gradients for each species. Solely in S. maritima and some populations of P. ferrugineum did the results show a highly significant geographic pattern towards more leg-bearing segments in southern populations of both sexes. As concerns G. proximus, we presented for the first time a remarkable geographic shift towards an increased number of pairs of legs in northern populations. Contrary to the conventional geographic pattern, we found that G. flavus and G. truncorum did not exhibit a north–south increase or decrease in segment number. Although there was no general/universal evidence supporting the occurrence of a significant regression slope between mean segment number and latitude/temperature, more information shows that the overall region-to-region segment variation was highly significant in both sexes. In S. maritima and P. ferrugineum mean segment number was correlated with the north–south temperature cline. The same was not observed in G. proximus. Parthenogenesis in G. proximus, and a series of ecological characteristics such as habitat preferences, spatial distribution, and fragmented populations could explain the presence or absence of a geographic patterning of segment number variation along a latitudinal cline. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 100, 899–909.
Anthropometric Prediction Equations for Estimating Muscle Mass of Elderly Women

Muscle Mass (MM) has an important role in health and physical performance. There are many MM prediction equations, but none is formulated in Indonesia. This study aimed to develop Anthropometric Equations (AE) prediction for MM. A cross sectional study was used to formulate AE prediction through multiple regression analysis. The significance of observed differences between predicted and actual MM was tested by t test while level of agreement was assessed by Bland Altman plot. A significant correlation was found between MM and height, body mass index, calf/arm/waist circumferences, and waist hip ratio (p<0.05). Regression anal¬ysis indicated that age, height, and Mid Arm Circumference (MAC) contributed significantly to MM. The resulting equation was MM (kg) = -10.22+(-.097x age)+(0.16xheight)+(0.30xMAC). There was no significant difference between actual and predicted MM results, and both had significant correlation. These results suggest that age, AP related to MM and AE provide valid prediction of MM for healthy elderly women in Jakarta.
The Effect of Resveratrol on Mitochondrial Function in Myoblasts of Patients with the Common m.3243A>G Mutation

Mitochondrial function is essential for ATP-supply, especially in response to different cellular stressors. Increased mitochondrial biogenesis resulting from caloric restriction (CR) has been reported. Resveratrol (RSV) is believed to mimic the physiological effects of CR mainly via a sirtuin (SIRT) 1-dependent pathway. The effect of RSV on the physiological function of mitochondrial respiratory complexes was evaluated using a Seahorse XF96. Myoblasts of five patients harboring the m.3243A>G mutation and five controls were analyzed. The relative expression of several genes involved in mitochondrial biogenesis was evaluated for a better understanding of the coherent mechanisms. Additionally, media-dependent effects of nutritional compounds and hormonal restrictions (R) on myoblasts from patients and controls in the presence or absence of RSV were investigated. Culturing of myoblasts under these conditions led to an upregulation of almost all the investigated genes compared to normal nutrition. Under normal conditions, there was no positive effect of RSV on mitochondrial respiration in patients and controls. However, under restricted conditions, the respiratory factors measured by Seahorse were improved in the presence of RSV. Further studies are necessary to clarify the involved mechanisms and elucidate the controversial effects of resveratrol on SIRT1 and SIRT3 expression.
Gas6 Induces Myelination through Anti-Inflammatory IL-10 and TGF-β Upregulation in White Matter and Glia

The Gas6–TAM (Tyro3, Axl, Mer) ligand–receptor system is believed to promote central nervous system (CNS) (re)myelination and glial cell development. An additional important function of Gas6–TAM signalling appears to be the regulation of immunity and inflammation, which remains to be fully elucidated in the CNS. Here, we characterised the expression of TAM receptors and ligands in individual CNS glial cell types, observing high expression of Gas6 and the TAM receptors, Mer and Axl, in microglia, and high expression of Tyro3 in astrocytes. We also investigated the effect of Gas6 on the inflammatory cytokine response in the optic nerve and in mixed glial cell cultures from wildtype and single TAM receptor knockout mice. In wildtype and Mer-deficient cultures, Gas6 significantly stimulated the expression of the anti-inflammatory/pro-repair cytokines interleukin 10 (IL-10) and transforming growth factor β (TGF-β), whereas this effect was absent in either Tyro3 or Axl knockout cultures. Furthermore, Gas6 caused upregulation of myelin basic protein (MBP) expression in optic nerves, which was blocked by a neutralising antibody against IL-10. In conclusion, our data show that microglia are both a major source of Gas6 as well as an effector of Gas6 action in the CNS through the upregulation of anti-inflammatory and pro-repair mediators. Furthermore, the presence of both Axl and Tyro3 receptors appears to be necessary for these effects of Gas6. In addition, IL-10, alongside suppressing inflammation and immunity, mediates the pro-myelinating mechanism of Gas6 action in the optic nerve. Therefore, Gas6 may present an attractive target for novel therapeutic interventions for demyelinating as well as neuroinflammatory disorders of the CNS.
Allometric scaling patterns among the human coronary artery tree, myocardial mass, and coronary artery flow

Human coronary artery tree is a physiological transport system for oxygen and vital materials through a hierarchical vascular network to match the energy demands of myocardium, which has the highest oxygen extraction ratio among body organs and heavily depends on the blood flow for its energy supply. Therefore, it would be reasonable to expect that the key design principle of this arterial network is to minimize energy expenditure, which can be described by allometric scaling law. We enrolled patients who underwent coronary computed tomography angiography without obstructive lesion. The cumulative arterial length (L), volume (V), and diameter (D) in relation to the artery‐specific myocardial mass (M) were assessed. Flow rate (Q) was computed using quantitative flow ratio (QFR) measurement in patients who underwent invasive angiography. A total of 638 arteries from 43 patients (mean age 61 years, male gender 65%) were analyzed. A significant power‐law relationship was found among L–M, V–M, D–M, V–L, D–L, and V–D, and also among Q–M, Q–L, Q–V, and Q–D in 106 arteries interrogated with QFR (p < .001, all). Our results suggest that the fundamental design principle of the human coronary arterial network may follow allometric scaling law.
Parenting Together: Understanding the Shared Context of Positive Parenting Among Low-Income Black Families

This study examined the relations between family demographics and positive parenting dimensions among urban-residing, low-income, Black caregiving dyads. Participants were 100 co-caregivers affiliated with a Head Start program and reporting on 50 preschool-aged children. Given that the parenting context for the caregiver pairs was not independent, multilevel dyadic analysis was employed to determine demographic predictors of positive parenting dimensions as measured by the emically derived Black Parenting Strengths in Context scale. Findings illuminated associations between combinations of adult/child characteristics (e.g., nativity, parental employment status, child gender) and the five dimensions of positive parenting measured (i.e., Fostering Connectedness; Racial and Cultural Pride; Involvement at School; Religious and Spiritual Practices; Behavioral Responsiveness and Guidance). Findings suggest implications for future research and theory involving Black family life—specifically the need to examine parenting by considering the combined effects of individual and shared family characteristics—and for designing parent support efforts that recognize family roles and heritages, and that leverage the strengths of and heterogeneity among the multiple caregivers in the lives of young children.
Teaching kinematic graphs in an undergraduate course using an active methodology mediated by video analysis

This work address the preconceptions of first year engineering students about the kinematic graphs and the outcomes of a pedagogical strategy that relies on Predict – Observe – Explain learning method mediated by a video analysis software. The whole learning procedure was accompanied by a written material as students’ worksheets which enabled a formal record of the students’ conceptions throughout the process. The Test of Understanding of Kinematics Graphs was utilized to evaluate the students’ preconceptions and learning gains. It was found that first year engineering students had serious difficulties in drawing and interpreting kinematic graphs. Although interpretation of graphs and the understanding of the velocity and acceleration concepts improved, the preconceptions were quite resilient.