Miracle-dz/UniFAR-FTUs huggingface dataset:
Self-similar signed growth-fragmentations

Growth-fragmentation processes model the evolution of positive masses which undergo binary divisions. The aim of this paper is twofold. First, we extend the theory of growth-fragmentation processes to allow signed mass. Among others, we introduce genealogical martingales and establish a spinal decomposition for the associated cell system, following arXiv:1605.00581. Then, we study a particular family of such self-similar signed growth-fragmentation processes which arise when cutting half-planar excursions at horizontal levels. When restricting this process to the positive masses, we recover part of the family introduced by Bertoin, Budd, Curien and Kortchemski in arXiv:1605.00581.
IRON IS REQUIRED FOR THE INDUCTION OF ROOT FERRIC CHELATE REDUCTASE ACTIVITY IN IRON-DEFICIENT TOMATO

Two mutants of tomato and their corresponding wild-type genotypes, Tfer/TFER and chloronerva/Bonner Beste, were grown in nutrient solution under conditions leading to iron (Fe) deficiency. Iron deficiency caused decreases in growth, leaf chlorosis, and changes in the morphology of roots. Ferric chelate reductase activities of whole roots were generally lower in Fe-deficient plants than in control, Fe-sufficient plants. Plants grown for 7 days without Fe, however, had transient increases in whole root ferric chelate reductase activity after the addition of small amounts of Fe (2 μM) to the nutrient solution. Also, adding sequential 0.5 μM Fe pulses to the nutrient solution led to high whole root ferric chelate reductase activities. Similar results were obtained with a protocol using excised root tips instead of whole root systems to measure ferric chelate reductase activities. The protocol using root tips generally gave higher ferric chelate reductase rates than the method using whole roots, due to the localized expression of the enzyme in the distal root zones.
Risk factors for tissue expander infection in scar reconstruction: a retrospective cohort study of 2374 consecutive cases

Abstract Background Tissue expansion is used for scar reconstruction owing to its excellent clinical outcomes; however, the complications that emerge from tissue expansion hinder repair. Infection is considered a major complication of tissue expansion. This study aimed to analyze the perioperative risk factors for expander infection. Methods A large, retrospective, single-institution observational study was carried out over a 10-year period. The study enrolled consecutive patients who had undergone tissue expansion for scar reconstruction. Demographics, etiological data, expander-related characteristics and postoperative infection were assessed. Univariate and multivariate logistic regression analysis were performed to identify risk factors for expander infection. In addition, we conducted a sensitivity analysis for treatment failure caused by infection as an outcome. Results A total of 2374 expanders and 148 cases of expander infection were assessed. Treatment failure caused by infection occurred in 14 expanders. Multivariate logistic regression analysis identified that disease duration of ≤1 year (odds ratio (OR), 2.07; p < 0.001), larger volume of expander (200–400 ml vs <200 ml; OR, 1.74; p = 0.032; >400 ml vs <200 ml; OR, 1.76; p = 0.049), limb location (OR, 2.22; p = 0.023) and hematoma evacuation (OR, 2.17; p = 0.049) were associated with a high likelihood of expander infection. Disease duration of ≤1 year (OR, 3.88; p = 0.015) and hematoma evacuation (OR, 10.35; p = 0.001) were so related to high risk of treatment failure. Conclusions The rate of expander infection in patients undergoing scar reconstruction was 6.2%. Disease duration of <1 year, expander volume of >200 ml, limb location and postoperative hematoma evacuation were independent risk factors for expander infection.
Psychological Impact of Alopecia Areata

Introduction Alopecia areata is one of the commonest causes of nonscarring alopecia. Since hair is a vital part with very high cosmetic concern, hair loss might have a significant negative impact on patient's life. Hence, we aimed this to investigate depression and anxiety in patients with alopecia areata. Methods In this cross-sectional study, a total of 75 consecutive eligible patients of alopecia areata were interviewed over one-year period in the dermatology outpatient department. We recorded the relevant history and examination details in the present proforma. Nepali versions of Beck Depression Inventory and Beck Anxiety Inventory were used for the assessment of depression and anxiety, respectively. Data analysis was done with Statistical Package for the Social Sciences version 11.5. Results Among 75 patients, the prevalence of depression and anxiety were 66.7% and 73.3%, respectively, with median depression score = 5 (IQR = 0.0–10.0) and median anxiety score = 5 (IQR = 0.0–11.0). Out of all depressed patients, 82.0% had minimal and 18.0% had moderate depression. However, none of them had severe depression. Likewise, out of all patients with anxiety, 89.0% had mild and 11.0% had moderate anxiety, but none of them had severe anxiety. Conclusion Anxiety and depression are common psychological problems in patients with alopecia areata. Because of their direct impact on treatment outcome, we, treating dermatologist, must be aware of them, and we should counsel our patients for consultation with the psychiatrist on time for their maximum benefit.
Bond strength according to the moment of fiber post cutting fixed with self-adhesive cement to the root dentin

Background The fiber posts require a cut in the coronal portion to adjust it to the available clinical space. The cutting of posts cemented may generate tension via bur vibrations of drill on the bonding interface, with the possibility of decreasing the bond strength. Thus, this study aimed to evaluate if the moment of cutting the fiber posts has an effect on its bond strength when fixed with self-adhesive resin cement. Material and Methods Thirty-six bovine teeth were randomly divided into three groups after endodontic treatment and post space preparation (n = 12): IAC- the fiber posts were cutting immediately after cementation; ACR - the fiber posts were cutting after coronal reconstruction with resin; Control - the fiber posts were not cut. The fiber posts were cemented with self-adhesive cement (RelyX U200 - 3M ESPE). After 24 h, the teeth were sectioned perpendicularly and the push-out test was performed in a universal testing machine at a speed of 0.5 mm/min, until failure. Data were analyzed using two-way ANOVA and Tukey’s post-hoc test. Results The effect of moment of fiber posts cutting (p = 0.44) and the interaction between the factors moment of post cutting and third root (p = 0.81) had no significant. The root third factor showed a significant effect (p = 0.01). The bond strength in the apical third was significantly lower than in the middle (p = 0.00) and coronal (p = 0.01) thirds. Conclusions The moment of post cutting has no effect on the bond strength of fiber posts fixed with self-adhesive cement to the root canal. Key words:Fiber post, self-adhesive resin cement, push-out bond strength, operative dentistry.
Bioengineering Approaches to Accelerate Clinical Translation of Stem Cell Therapies Treating Osteochondral Diseases

The osteochondral tissue is an interface between articular cartilage and bone. The diverse composition, mechanical properties, and cell phenotype in these two tissues pose a big challenge for the reconstruction of the defected interface. Due to the availability and inherent regenerative therapeutic properties, stem cells provide tremendous promise to repair osteochondral defect. This review is aimed at highlighting recent progress in utilizing bioengineering approaches to improve stem cell therapies for osteochondral diseases, which include microgel encapsulation, adhesive bioinks, and bioprinting to control the administration and distribution. We will also explore utilizing synthetic biology tools to control the differentiation fate and deliver therapeutic biomolecules to modulate the immune response. Finally, future directions and opportunities in the development of more potent and predictable stem cell therapies for osteochondral repair are discussed.
Estimation of transpiration of the 'Valencia' orange young plant using thermal dissipation probe method

Most studies on measures of transpiration of plants, especially woody fruit, relies on methods of heat supply in the trunk. This study aimed to calibrate the Thermal Dissipation Probe Method (TDP) to estimate the transpiration, study the effects of natural thermal gradients and determine the relation between outside diameter and area of xylem in 'Valencia' orange young plants. TDP were installed in 40 orange plants of 15 months old, planted in boxes of 500 L, in a greenhouse. It was tested the correction of the natural thermal differences (DTN) for the estimation based on two unheated probes. The area of the conductive section was related to the outside diameter of the stem by means of polynomial regression. The equation for estimation of sap flow was calibrated having as standard lysimeter measures of a representative plant. The angular coefficient of the equation for estimating sap flow was adjusted by minimizing the absolute deviation between the sap flow and daily transpiration measured by lysimeter. Based on these results, it was concluded that the method of TDP, adjusting the original calibration and correction of the DTN, was effective in transpiration assessment.
Coronavirus disease-19 (COVID-19) associated with acute pancreatitis: case report

The SARS-CoV-2 primarily attacks the respiratory system and the most common symptoms include cough, shortness of breath, and fever. However, its tropism for the digestive system has been demonstrated and its clinical digestive manifestations are increasingly recognized. Nevertheless, little attention has been paid to pancreatic lesions included in SARS-CoV-2 infection. This case describes the presentation of acute pancreatitis as a complication associated with SARS-CoV-2 infection and the importance of looking for this complication in any patient with COVID-19. Data was collected from a patient admitted with COVID-19 to intensive care in July 2020. The patient was diagnosed with acute pancreatitis associated with SARS-CoV-2. Other causes of acute pancreatitis were excluded for both patients (including alcohol, obstruction/gallstones, drugs, trauma, hypertriglyceridemia, hypercalcemia). This case highlights acute pancreatitis as a complication associated with COVID-19 and highlights the importance of measuring lipasemia and performing an abdominal computed tomography (CT) scan in patients with COVID-19.
Pediatric Mandible Reconstruction: Controversies and Considerations

Summary Mandibular reconstruction in pediatric patients has some unique considerations. The method of reconstruction has to factor in the growth potential of the neo-mandible, the native mandible, and the donor site. The condyle is considered the main growth center of the mandible. Current literature indicates that fibula, iliac crest, and scapula osseous flaps do not have the ability to grow. Costochondral grafts exhibit growth because of the costal cartilage component, although the growth is unpredictable. Preservation of the mandibular periosteum can result in spontaneous bone regeneration. Fibula bone harvest in a child mandates close follow-up till skeletal maturity, to monitor for ankle instability and valgus deformity. Dental rehabilitation maintains occlusal relationships, which promotes normal maxillary development. Elective hardware removal should be considered to facilitate future dental implant placement and possible revision procedures. After completion of growth, if occlusion or symmetry is not satisfactory, secondary procedures can be performed, including distraction osteogenesis, orthognathic-type bone sliding operations, and segmental ostectomy.
Evolution of dust porosity through coagulation and shattering in the interstellar medium

The properties of interstellar grains, such as grain size distribution and grain porosity, are affected by interstellar processing, in particular, coagulation and shattering, which take place in the dense and diffuse interstellar medium (ISM), respectively. In this paper, we formulate and calculate the evolution of grain size distribution and grain porosity through shattering and coagulation. For coagulation, we treat the grain evolution depending on the collision energy. Shattering is treated as a mechanism of forming small compact fragments. The balance between these processes are determined by the dense-gas mass fraction $\eta_\mathrm{dense}$, which determines the time fraction of coagulation relative to shattering. We find that the interplay between shattering supplying small grains and coagulation forming porous grains from shattered grains is fundamentally important in creating and maintaining porosity. The porosity rises to 0.7--0.9 (or the filling factor 0.3--0.1) around grain radii $a\sim 0.1~\mu$m. We also find that, in the case of $\eta_\mathrm{dense}=0.1$ (very efficient shattering with weak coagulation) porosity significantly enhances coagulation, creating fluffy submicron grains with filling factors lower than 0.1. The porosity enhances the extinction by 10--20 per cent at all wavelengths for amorphous carbon and at ultraviolet wavelengths for silicate. The extinction curve shape of silicate becomes steeper if we take porosity into account. We conclude that the interplay between shattering and coagulation is essential in creating porous grains in the interstellar medium and that the resulting porosity can impact the grain size distributions and extinction curves.
Clinical epidemiology and mortality risk factors of gastric cancer in a sub-Saharan African setting: a retrospective analysis of 120 cases in Yaoundé (Cameroon)

Introduction in sub-Saharan Africa, there is scare published data on cancer in general and gastric cancer in particular. Methods we conducted a multicenter retrospective analysis of the medical records of patients followed for gastric cancer in 5 hospital departments in the city of Yaoundé (Cameroon) over 6 years. Results we recorded a total of 120 patients with a mean age of 53.4 ± 13.7 years. There were 62 females (51.7%). The most common risk factors for gastric cancer in our patients was Helicobacter pylori infection (59 cases, 49.1%). Seventy-six patients (63.3%) consulted within 1 to 6 months of symptoms on set at the forefront of which chronic epigastralgia (74.1%). At endoscopy, the tumor was mostly located at the antrum and was locally advanced or metastatic in 25.8% and 58.4 of cases respectively. Adenocarcinoma was the main histologic type found in 105 (87.5%) cases. Curative treatment could only be implemented in 26.7% of patients. We noted a total of 85 deaths (70.8%) with a mean survival time of 5.91 ± 7.51 months. Survival rate at 3 and 5 years was 10.1% and 4.6%, respectively. On multivariable analysis, variables independently associated with overall survival included: WHO stage 3 performance status (p = 0.042), palpable epigastric mass on examination (p = 0.042), pyloric localization (p = 0.007), and liver metastasis (p = 0.012). Conclusion clinical epidemiology of gastric cancer in our study is comparable to those of other African studies with a predominance of locally advanced/metastatic forms. Prognosis is grim with diagnostic delay behind all of the identified mortality risk factors.
ANCA-Associated Intrahepatic Duct Injury Associated with Levamisole-Adulterated Cocaine

Damage to the liver or kidney can occur through direct toxic effects; however, damage can also be drug-induced immune-mediated. Levamisole-adulterated cocaine (LAC) is known to cause antineutrophil cytoplasmic antibody- (ANCA-) associated vasculitis and glomerulonephritis leading to acute kidney injury and end-stage renal disease. It remains unclear whether LAC is associated with hepatic duct damage. Here, we report a case with biopsy-proven evidence of intrahepatic duct damage months after being diagnosed with ANCA-associated crescentic and sclerosing glomerulonephritis caused by LAC use. This case represents the first report of LAC-induced ANCA-associated hepatic duct cholestasis in the setting of previous LAC-induced ANCA-positive glomerulonephritis.
Where2Act: From Pixels to Actions for Articulated 3D Objects

One of the fundamental goals of visual perception is to allow agents to meaningfully interact with their environment. In this paper, we take a step towards that long-term goal – we extract highly localized actionable information related to elementary actions such as pushing or pulling for articulated objects with movable parts. For example, given a drawer, our network predicts that applying a pulling force on the handle opens the drawer. We propose, discuss, and evaluate novel network architectures that given image and depth data, predict the set of actions possible at each pixel, and the regions over articulated parts that are likely to move under the force. We propose a learning-from-interaction framework with an online data sampling strategy that allows us to train the network in simulation (SAPIEN) and generalizes across categories. Check the website for code and data release.
Probiotic Properties of Lactobacillus helveticus and Lactobacillus plantarum Isolated from Traditional Pakistani Yoghurt

Probiotic bacteria are of utmost importance owing to their extensive utilisation in dairy products and in the prevention of various intestinal diseases. The objective of this study was to assess the probiotic properties of bacteriocin-producing isolates of Lactobacillus helveticus and Lactobacillus plantarum isolated from traditional Pakistani yoghurt. In this study, ten bacteriocin-producing isolates were selected to screen for the probiotic property. The isolates showed resistance to acidic pH (6-6.5), bile salt (0.01-1%), and 1-7% NaCl salt and showed good growth at acidic pH and antibacterial activity against ten different foodborne pathogens. Interestingly, these isolates were proved to be effective against Actinobacter baumannii but least effective against Klebsiella pneumoniae and Pseudomonas aeruginosa. A few isolates were found to be resistant to some antibiotics like vancomycim, gentamycin, erythromycin, streptomycin, and clindamycin. Our results provide strong evidence in favour of traditional Pakistani yoghurts as a potential source of bacteriocin-producing bacteria with an added benefit of the probiotic property. Specifically, LBh5 was considered a good probiotic isolate as compared to other isolates used in the study. Further extensive research should be done on isolation and characterisation of probiotic isolates from local fermented foods, and then, these isolates should be used in the development of probiotic enriched food supplements in Pakistan.
Cross-Domain Joint Dictionary Learning for ECG Inference From PPG

The inverse problem of inferring clinical gold-standard electrocardiogram (ECG) from photoplethysmogram (PPG) that can be measured by affordable wearable Internet of Healthcare Things (IoHT) devices is a research direction receiving growing attention. It combines the easy measurability of PPG and the rich clinical knowledge of ECG for long-term continuous cardiac monitoring. The prior art for reconstruction using a universal basis, such as discrete cosine transform (DCT), has limited fidelity for uncommon ECG shapes due to the lack of representative power. To better utilize the data and improve data representation, we design two dictionary learning frameworks, the cross-domain joint dictionary learning (XDJDL), and the label-consistent XDJDL (LC-XDJDL), to further improve the ECG inference quality and enrich the PPG-based diagnosis knowledge. Building on the K-SVD technique, the proposed joint dictionary learning frameworks extend the expressive power by optimizing simultaneously a pair of signal dictionaries for PPG and ECG with the transforms to relate their sparse codes and disease information. The proposed models are evaluated with a variety of PPG and ECG morphologies from two benchmark datasets that cover various age groups and disease types. The results show the proposed frameworks achieve better inference performance than previous methods with average Pearson coefficients being 0.88 using XDJDL and 0.92 using LC-XDJDL, suggesting an encouraging potential for ECG screening using PPG based on the proactively learned PPG-ECG relationship. By enabling the dynamic monitoring and analysis of the health status of an individual, the proposed frameworks contribute to the emerging digital twins paradigm for personalized healthcare.
Ultrasonic techniques to obtain dental pulp from impacted third molars

Background In the dental clinic impacted teeth are frequent findings, especially upper and lower third molars, leading to their exodontia. Among surgical techniques piezosurgery is advantageous for delicate structures in the oral cavity. Extracted teeth, usually discarded, have been revalued as biological material, providing living tissues with possible applications in regenerative dentistry. The aim was to compare cross-section methods of upper included third molars by ultrasonic piezoelectric technique to obtain dental pulp, with diamond-coated tip (DT) against titanium nitride-coated tip (TN), according to the pulp tissue cell viability and the section surface characteristics. Material and Methods Patients attending dental consultation were evaluated. Upper third molars (n= 24) were avulsed from 15 patients with exodontia indication, age 18-26 years old, who agreed to participate of the study. Third molars were cross-sectioned at amelocemental junction level with piezoelectric device using DT or TN inserts. Pulps were mechanic and enzymatically treated, and tissue viability determined by Trypan Blue test. Sectioned teeth were visualized using Scanning Electron Microscope (SEM). Ethical principles of biomedical research were respected; all patients gave their informed consent. Results Viability of pulp tissue was 84.71% not associated to sex (p= 0.141) nor to teeth position, upper right third molar or upper left third molar (p= 0.580). According to the insert used, pulp tissue viability was 85.21% with TN, similar to 84.00% with DT (p= 0.611). By SEM, cut performed by TN insert showed smooth and uniform surfaces, while DT insert surfaces were irregular, porous, with fissures. Conclusions Piezosurgery applied to cross-section upper third molars with both types of inserts showed differences in the cut surfaces but similar effectiveness regarding preservation of pulp tissue with high viability, thus, they could be allocated for further cellular developments. Key words:Impacted teeth, third molars, piezosurgery, regenerative dentistry.
Production of hydrogen by ethanol steam reforming over nickel–metal oxide catalysts prepared via urea–nitrate combustion method

A series of Ni/MgO catalysts have been prepared by a urea–nitrate combustion method, studied for the ethanol steam reforming, and compared with Ni/ZnO and Ni/Al2O3. The results show that Ni/MgO is superior to the latter two types of catalysts, especially in terms of H2 yield. Influential factors, including Ni loading, temperature, water‐to‐ethanol molar ratio, and liquid hourly space velocity, are investigated with the Ni/MgO catalyst. The conversions are always complete at temperatures above 773 K, regardless of the changes of the other reaction conditions. The hydrogen yield increases with increasing temperature and H2O/C2H5OH molar ratios, with up to 75% being obtained at 873 K, liquid hourly space velocity (LHSV) of 5.0 ml g–1 h–1 and H2O/C2H5OH molar ratio of 10. Copyright © 2010 John Wiley & Sons, Ltd.