Miracle-dz/UniFAR-FTUs huggingface dataset:
In Vitro Analysis of Histology, Mechanics, and Safety of Radiation-free Pre-hydrated Human Acellular Dermal Matrix

Purpose Acellular dermal matrix (ADM) supports tissue expanders or implants in implant-based breast reconstruction. The characteristics of ADM tissue are defined by the manufacturing procedure, such as decellularization, preservation, and sterilization, and are directly related to clinical outcomes. This study aimed to compare the properties of a new pre-hydrated-ADM (H-ADM-low) obtained using a decellularization reagent reduction process with a low concentration of detergent with those of radiation-sterilized H-ADM and freeze-dried ADM (FD-ADM). Methods ADMs were evaluated in terms of structure, mechanical quality, and cytotoxicity using histochemical staining, tensile strength testing, and in vitro cell viability analysis. Results The tissue structure of H-ADM-low (CGDERM ONE-STEP) was similar to that of native skin despite complete decellularization. By contrast, in FD-ADM, the tissue structure was damaged by the freeze-drying process, and radiation-sterilized H-ADM showed a compact fibrillar arrangement. Furthermore, matrix components such as collagen and elastin were preserved in H-ADM-low, whereas a loss of elastin fibers with fragmented distribution was observed in radiation-sterilized H-ADMs. H-ADM-low's tensile strength (58.84 MPa) was significantly greater than that of FD-ADM (38.60 MPa) and comparable with that of radiation-sterilized H-ADMs. The residual detergent content in H-ADM-low (47.45 mg/L) was 2.67-fold lower than that of H-ADM decellularized with a conventional detergent concentration (126.99 mg/mL), and this finding was consistent with the cell viability results (90.7% and 70.7%, respectively), indicating that H-ADM-low has very low cytotoxicity. Conclusions H-ADM-low produced through aseptic processes retains the original tissue structure, demonstrates excellent mechanical properties, and does not affect cell viability. Therefore, this newer H-ADM is suitable for use in implant-based breast reconstruction.
Multimorbidity patterns among COVID-19 deaths: proposal for the construction of etiological models

ABSTRACT Objectives. To describe patterns of multimorbidity among fatal cases of COVID-19, and to propose a classification of patients based on age and multimorbidity patterns to begin the construction of etiological models. Methods. Data of Colombian confirmed deaths of COVID-19 until June 11, 2020, were included in this analysis (n=1488 deaths). Relationships between COVID-19, combinations of health conditions and age were explored using locally weighted polynomial regressions. Results. The most frequent health conditions were high blood pressure, respiratory disease, diabetes, cardiovascular disease, and kidney disease. Dyads more frequents were high blood pressure with diabetes, cardiovascular disease or respiratory disease. Some multimorbidity patterns increase probability of death among older individuals, whereas other patterns are not age-related, or decrease the probability of death among older people. Not all multimorbidity increases with age, as is commonly thought. Obesity, alone or with other diseases, was associated with a higher risk of severity among young people, while the risk of the high blood pressure/diabetes dyad tends to have an inverted U distribution in relation with age. Conclusions. Classification of individuals according to multimorbidity in the medical management of COVID-19 patients is important to determine the possible etiological models and to define patient triage for hospitalization. Moreover, identification of non-infected individuals with high-risk ages and multimorbidity patterns serves to define possible interventions of selective confinement or special management.
Medical Foods: Science, Regulation, and Practical Aspects. Summary of a Workshop

ABSTRACT On August 13–14, 2019, the Healthcare Nutrition Council and the ASN held the Medical Foods Workshop: Science, Regulation, and Practical Aspects. Medical food products help patients manage their disease and improve their quality of life. Yet many hurdles exist to getting patients new products. In this workshop, participants addressed some of these hurdles, with specific emphasis on topics like the statutory term distinctive nutritional requirements, the regulatory term modification of the diet alone, the role of clinical guidelines, the requirement that medical foods be used under medical supervision, and differentiation of foods for special dietary use from medical foods, as well as product innovation and future research. Real-world examples were discussed for intractable epilepsy, diabetes, end-stage renal disease, and inflammatory bowel disease.
Sulforaphane Attenuates Isoproterenol-Induced Myocardial Injury in Mice

The development of isoproterenol- (ISO-) induced oxidative stress in the myocardium results in myocardial necrosis. Sulforaphane (SFN-0.4% of sulforaphane from standardized broccoli sprout extract) possesses chemoprotective, antidiabetic, and antibacterial activities and is also active against cardiovascular-related problems due to its antioxidant properties. This study was designed to investigate the cardioprotective effect of SFN against isoproterenol-induced myocardial injury in mice. Healthy male Swiss albino mice weighing 20–30 g were used in this study. These mice were randomly divided into five groups (n = 6). All the mice in the experimental groups received isoproterenol (5 mg/kg bw, via i.p.) consecutively for 2 days. The mice were treated with SFN (4 mg/kg bw) and α-tocopherol (TCF) (10 mg/kg bw) by oral gavage for 1-7 days as pre- and posttreatment for the prophylactic and treatment groups, respectively. On day 10, the following parameters were studied: heart weight to body weight ratio, antioxidant parameters, and cardiac markers; and mitochondrial enzymes were estimated for cardioprotection. Administration of isoproterenol in mice showed an increased level of serum cardiac markers and heart mitochondrial ATPase enzymes. An increased level of myocardial thiobarbituric acid-reactive substance and decreased levels of endogenous antioxidant enzymes indicated that oxidative stress is induced by isoproterenol in the myocardium. The administration of SFN in mice restored the levels of all biochemical parameters to near-normal levels. Histopathological studies further confirmed the protective effect of sulforaphane. This study concluded that treatment with SFN boosts the endogenous antioxidant activity and prevents isoproterenol-induced myocardial injury.
Prognostic Value of Autophagy-related Proteins in Human Gastric Cancer

Purpose Autophagy-related proteins (ATG) play a crucial role in autophagy. Recently, the functions of autophagy in cancer have been gathering attention. However, the prognostic value of ATGs in gastric cancer (GC) has not been explored. Methods The Kaplan–Meier plotter (KM plotter) online database was used to examine the value of ATGs gene expression levels in overall survival (OS) prediction in GC patients with different clinical stage, differentiation, gender, HER2 status, and therapeutic strategy. In vitro experiments applied VE-822, an effective GC treatment, to assess cell migration and proliferation in gastric mucosa epithelial cells, and real-time PCR was used to measure alterations of autophagy-related gene expression. Results High ATG3, ATG4C, ATG5, and ATG10 mRNA levels were associated with good OS, while increased ATG4B, ATG7, ATG12, ATG16L1, and TECPR1 mRNA levels related to unfavorable OS in patients with GC. ATG12 overexpression had different effects on OS due to high levels of heterogeneity. High ATG12 expression was correlated with good OS in female patients with GC and with bad OS for male patients. Additionally, the increased ATG12 expression was more likely to get a satisfactory OS in patients who underwent surgery alone but was associated with poor OS for patients treated with 5-FU adjuvant. In addition, elevated TECPR1 expression was related to favorable OS for patients with poorly differentiated type, while for patients with moderate differentiation, it was relevant to poor OS. The in vitro experiments showed that berzosertib could significantly inhibit the migration and proliferation of human gastric mucosa epithelial cells, and further real-time PCR assessment of ATG expressions partially coincided with the bioinformation analysis above. Conclusion These results indicate that individual ATGs have unique prognostic significance interpreted using Kaplan–Meier plotter analysis and in vitro experiments, and this may help guide clinical therapeutic strategy and promote OS by individualizing therapy for GC patients.
Application of electrochemical reactor divided by cellulosic membrane for optimized simultaneous removal of phenols, chromium, and ammonia from tannery effluents

The post treatment of simulated tannery wastewater was evaluated in an electrochemical oxidation process under galvanostatic conditions. A continuous flow reactor divided by a cellulosic membrane consisted of Ti/SnO2–Sb anodes and iron cathodes was used. Central composite design and response surface methodology (RSM) were applied to investigate the effects of six operational parameters, namely initial concentration of total phenols (TPh), total chromium (TCr), total ammonia nitrogen (TAN), flow rate (Q), current intensity (I), and electrode surface area (A). Effectiveness of the innovative cellulosic membrane was proven by considerable pH variations in the anolyte and catholyte chambers. A faster removal rate was observed for TPh and TAN, followed by TCr. The treatment level was very sensitive to Q and I in the studied ranges. RSM showed the removal efficiencies of 78.14%, 63.42%, and 86.09% for TPh, TCr, and TAN, respectively, are achieved under optimal conditions with consumption of only 9.03 kWh m−3 electrical energy. Chlorinated compounds such as chloroform, 2,4-dichlorophenol, and chlorobenzene were detected as the degradation intermediates. According to the obtained results, electrolysis in the divided cell with cellulosic membrane is a practical, cost-effective method for advanced treatment of tannery effluents.
Genetic Variability, Heritability, and Clustering Pattern Exploration of Bambara Groundnut (Vigna subterranea L. Verdc) Accessions for the Perfection of Yield and Yield-Related Traits

Bambara groundnut (Vigna subterranea L. Verdc.) is considered an emerging crop for the future and known as a crop for the new millennium. The core intention of this research work was to estimate the variation of landraces of Bambara groundnut considering their 14 qualitative and 27 numerical traits, to discover the best genotype fitted in Malaysia. The findings of the ANOVA observed a highly significant variation (p ≤ 0.01) for all the traits evaluated. There was a substantial variation (7.27 to 41.21%) coefficient value, and 14 out of the 27 numerical traits noted coefficient of variation (CV) ≥ 20%. Yield (kg/ha) disclosed positively strong to perfect high significant correlation (r = 0.75 to 1.00; p ≤ 0.001) with traits like fresh pod weight, dry pod weight, and dry seed weight. The topmost PCV and GCV values were estimated for biomass dry (41.09%) and fresh (40.53%) weight with high heritability (Hb) and genetic advance (GA) Hb = 95.19%, GA = 80.57% and Hb = 98.52%, GA = 82.86%, respectively. The topmost heritability was recorded for fresh pod weight (99.89%) followed by yield (99.75%) with genetic advance 67.95% and 62.03%, respectively. The traits with Hb ≥ 60% and GA ≥ 20% suggested the least influenced by the environment as well as governed by the additive genes and direct selection for improvement of such traits can be beneficial. To estimate the genetic variability among accessions, the valuation of variance components, coefficients of variation, heritability, and genetic advance were calculated. To authenticate the genetic inequality, an unweighted pair group produced with arithmetic mean (UPGMA) and principal component analysis was executed based on their measurable traits that could be a steadfast method for judging the degree of diversity. Based on the UPGMA cluster analysis, constructed five distinct clusters and 44 accessions from clusters II and IV consider an elite type of genotypes that produce more than one ton yield per hectare land with desirable traits. This study exposed an extensive disparity among the landraces and the evidence on genetic relatives will be imperative in using the existing germplasm for Bambara groundnut varietal improvement. Moreover, this finding will be beneficial for breeders to choose the desirable numerical traits of V. subterranea in their future breeding program.
Mechanistic studies of acetolactate decarboxylase

Acetolactate decarboxylase (ALDC) is a bacterial enzyme of the butanediol fermentation pathway that decarboxylates (S)-acetolactate into (R)-acetoin. Remarkably this enzyme also catalyses the decarboxylation of the opposite enantiomer, (R)-acetolactate, to give the same product, (R)-acetoin. It is unusual for an enzyme to convert racemic substrate into an enantiomerically pure product. This unusual stereochemical control has led to extensive study of the ALDC mechanism and the hypothesis that ALDC catalyses the rearrangement of (R)-acetolactate into (S)-acetolactate prior to decarboxylation. The research presented in this thesis sought to gain insight into the molecular mechanism of the ALDC catalysed reaction by using a combination of kinetic and structural techniques. Bacillus subtilis alsD encoding ALDC was cloned into an expression vector and a series of active site mutants were prepared. The activity of mutant AlsD were determined using a circular dichroism based assay, which identified that the two active site glutamates and a basic residue are required for catalysis. A series of chiral transition state analogues were prepared in a two-step synthesis to give enantiomerically enriched 2,3-dihydroxy-2-methylbutanoic acid in reasonable yields. Three of the compounds were identified as competitive inhibitors, co-crystallised with Bacillus brevis ALDC and structures solved to 1.1-1.6 A. These structures, coupled with inhibition studies and site-directed mutagenesis, provide an improved understanding of the molecular processes involved in the stereoselective decarboxylation of acetolactate. A mechanism for the transformation of each enantiomer of acetolactate is proposed.
MECHANISMS OF PHOSPHATE SORPTION BY SOILS AND HYDROUS FERRIC OXIDE GEL

Summary Data for the sorption of added inorganic phosphate (P) by contrasting soils and iron oxide gel were resolved by a method of successive approximation of the Langmuir sorption constants. Three distinct Langmuir equations described the overall isotherm irrespective of the experimental conditions used. Free energies of sorption (ΔG) for a particular region were similar for each soil and for iron oxide gel under all experimental conditions. In contrast, the sorption maximum for each region was influenced by the sorbent and experimental conditions. Because of the pronounced similarities in their P sorption characteristics iron oxide gel was used as a model surface for P sorption by soils. Three mechanisms for P sorption by iron oxide gel and by soils are proposed: (i) chemisorption at protonated surface sites, (ii) chemisorption by replacement of surface hydroxyls, and (iii) a more-physical sorption of P as a potential-determining ion.
Morphometric characterization of Kacang goats raised in lowland and highland areas of Jambi Province, Indonesia

Objective: The objective of this study was to characterize Kacang goats (aged 1–2 years) in the highland (group 1) and lowland (group 2) areas of Jambi Province based on their body measurements and body indices. Materials and Methods: A total of 320 goats were collected from lowland (n = 160), and highland (n = 160) areas with sex proportions of 80 bucks and 80 does for each area. Eight body measurements and 12 body indices were used to characterize the Kacang goats from different areas. Results: The research showed that each animal group had one principal component (PC) for body measurements and four PCs for body indices. Thus, the body measurement of rump height (RH) and the body indices of area index, weight index, and thoracic development were suggested as the variables to distinguish the Kacang goats from different areas. However, the canonical correlation (rc) value in the study was approximately 0.30 (low). Therefore, about 59.4% (lowland) and 60.6% (highland) of Kacang goats were characterized by the body measurements, and the body indices were indicated approximately 48.8% (lowland) and 61.2% (highland) of Kacang goats. A cluster analysis of the four Kacang populations revealed that Kacang goats in this study were grouped into a first cluster (Kerinci) and a second cluster (Muaro Jambi, Batanghari, and Sungai Penuh). Conclusion: It is concluded that body measurements and body indices cannot characterize the Kacang goats from lowland and highland areas.
Human Mesenchymal Stem Cells: The Present Alternative for High-Incidence Diseases, Even SARS-Cov-2

Mesenchymal stem cells (MSCs), defined as plastic adherent cells with multipotent differentiation capacity in vitro, are an emerging and valuable tool to treat a plethora of diseases due to their therapeutic mechanisms such as their paracrine activity, mitochondrial and organelle transfer, and transfer of therapeutic molecules via exosomes. Nowadays, there are more than a thousand registered clinical trials related to MSC application around the world, highlighting MSC role on difficult-to-treat high-incidence diseases such as the current COVID-19, HIV infections, and autoimmune and metabolic diseases. Here, we summarize a general overview of MSCs and their therapeutic mechanisms; also, we discuss some of the novel clinical trial protocols and their results as well as a comparison between the number of registries, countries, and search portals.
Buoyant vortex rings

It is pointed out that there is a fundamental difference in the behaviour of vortex rings projected upwards, according as they do or do not contain fluid which is lighter than the surroundings. A theory based on the perfect fluid approximation is developed to describe the motion of buoyant rings in a uniform fluid. The essential assumption is that the circulation remains constant with time while the buoyancy force acts to increase the impulse of a ring. This leads to the prediction that increasing the buoyancy will give a greater rate of expansion and a lower velocity of rise. The theory is extended to the case of a ring rising through a stably stratified fluid having a constant density gradient; in this case increasing the buoyancy should lead to a lower final height. The predictions of the theory have been verified by carrying out experiments in the laboratory with small vortex rings formed in water, using methylated spirits and salt to produce the density differences. The observations suggest that substantially the same analysis may be applicable to phenomena on a larger scale in the atmosphere; the velocity and final height of an explosion cloud should be determined by the buoyancy and circulation generated near the ground and the stability conditions of the atmosphere.
GROWTH AND YIELD MODELS FOR YOUNG STANDS OF Tectona grandis IN TANGARÁ DA SERRA, MATOGROSSO, BRAZIL

The objective of this study was to adjust and evaluate growth and yield models for young stands of Tectona grandis (aged less than 6 years), located in Tangara da Serra, Mato Grosso, Brazil. Thus, 50 permanent plots with at least five successive measurements were used. After the analysis, it was verified that the alternative model is more precise than the Clutters model.
Effects of iron oxidation state on viscosity, lunar composition 15555

The viscous flow behavior of lunar composition 15555, which contains about 22.5 wt % FeO, has been determined over a range of temperature from 620° to 700°C and from 1215° to 1400°C. The material was synthesized under mildly reducing conditions to simulate the Fe2+ /total Fe ratio of the lunar environment. The effect of iron oxidation state on flow behavior in the high-viscosity region has been evaluated for specimens of the 15555 composition having Fe2+/ total Fe ratios of 0.94, 0.76, and 0.20. Change of the Fe2+ concentration ratio from 0.94 to 0.76 had no observable effect on the viscosity; change of the ratio from 0.76 to 0.20 resulted in a dramatic increase in viscosity by some 3 orders of magnitude at a given temperature but did not change the form of the variation of viscosity with temperature. The flow behavior is discussed and related to the structural features of the glasses.
Nitrogen fertilizer value of feedlot manure for irrigated corn production

Abstract The efficient use of cattle manure nutrients for crop production is important to achieve economical farming and to protect water quality, but the nutrient availability, especially nitrogen (N), of stockpiled manure in semi‐arid environments under irrigation needs to be defined so that appropriate rates of application can be determined. The first year's effects of cattle feedlot manure on corn production in northwestern New Mexico were evaluated in a field study. Variable rates of N from cattle manure were compared with N from urea in 1992 and 1993. Corn yields and N uptake were increased by increasing N fertilizer and manure application from 7,210 to 12,177 kg ha‐1 in 1992, and from 9,555 to 11,966 kg ha‐1 in 1993. The grain yields were also highly correlated (R2=0.94) with corn tissue total nitrogen (TN). Two kg of manure‐N were equivalent to 1 kg of urea‐N in terms of plant uptake and yield response in the first year of manure application. No significant movement of nitrate occurred in the top .
Processes affecting isotopes in precipitation of an arid region

The isotopic composition of precipitation has been measured in samples simultaneously collected during individual precipitation events at two neighbouring high-altitude stations (Houxia at 2100 m a.s.l. and Gaoshan at 3545 m a.s.l.) in the Tianshan Mts. , northwest China. The observed changes of δ18O (δ2H) and deuterium excess with surface air temperature, altitude and season have been evaluated to derive information on the effects of subcloud evaporation and moisture recycling on the formation of precipitation and its isotopic composition under arid climatic conditions. Consulting the long-term monthly averages of ‘d’ excess and temperature of the nearest GNIP station Wulumuqi, a striking similarity was found with the results of the two high-altitude stations concerning the relation between ‘d’ excess and temperature. The ‘d’ excess-temperature plot of the Wulumuqi data shows an hysteresis effect which appears to signify seasonal changes in the interplay between subcloud evaporation and moisture recycling. Finally, for the first time a negative altitude gradient of the d excess has been found for all stations including two more GNIP stations in northwest China but far away from the study area. This ‘inverse altitude effect’ may manifest a decrease of the recycled fraction in air moisture with altitude.
Oil blob populations and mobilization of trapped oil in unconsolidated packs

Residual oil was obtained by waterflooding, under water-wet conditions, in unconsolidated packs of glass spheres at low capillary numbers. Trapped oil blobs were mobilized in a sequence of decreasing size with subsequent increases in capillary number. The larger blobs, which extend over many adjacent pores, fission repeatedly upon mobilization and the smaller daughter blobs are restranded. There is negligible oil production until the blob population has been reduced to single pore blobs (singlets). Thus, the critical capillary number for mobilization of significant amounts of oil in unconsolidated bead packs is not related to the original blob size population, but rather to the conditions necessary for mobilization of singlets.