Miracle-dz/UniFAR-FTUs huggingface dataset:
Effects of Binaural Beat Stimulation in Adults with Stuttering

In recent decades, several studies have demonstrated a link between stuttering and abnormal electroencephalographic (EEG) β-power in cortex. Effects of exposure to binaural stimuli were studied in adults with stuttering (AWS, n = 6) and fluent participants (n = 6) using EEG, ECG, and speech analysis. During standard reading tasks without stimulation, in controls but not in the AWS group, EEG β-power was significantly higher in the left hemisphere than in the right hemisphere. After stimulation, the power of the β-band in AWS participants in the left hemisphere increased 1.54-fold. The average β-band power within the left frontotemporal area and temporoparietal junction of the cortex after stimulation in AWS participants shows an increase by 1.65-fold and 1.72-fold, respectively. The rate of disfluency dropped significantly immediately after stimulation (median 74.70% of the baseline). Similarly, the speech rate significantly increased immediately after stimulation (median 133.15%). We show for the first time that auditory binaural beat stimulation can improve speech fluency in AWS, and its effect is proportional to boost in EEG β-band power in left frontotemporal and temporoparietal junction of cortex. Changes in β-power were detected immediately after exposure and persisted for 10 min. Additionally, these effects were accompanied by a reduction in stress levels.
The language-related cerebro-cerebellar pathway in humans: a diffusion imaging–based tractographic study

Background The cerebellum and cerebral cortex form the most important cortico-cerebellar system in the brain. However, diffusion magnetic resonance imaging (MRI)-based tractography of the connecting white matter between the cerebellum and cerebral cortex, which support language function, has not been extensively reported on. This work aims to serve as a guideline for facilitating the analysis of white matter tracts along the language-related cerebro-cerebellar pathway (LRCCP), which includes the corticopontine, pontocerebellar, corticorubral, rubroolivary, olivocerebellar, and dentatorubrothalamic tracts. Methods The LRCCP templates were developed via processing the high-resolution, population-averaged atlas available in the Human Connectome Project (HCP)-1065 dataset (2017 Q4, 1,200-subject release) in DSI Studio. The deterministic tracking was performed with the manually selected regions of interest (ROIs) on this atlas according to prior anatomic knowledge. Templates were then applied to the MRI datasets of 30 health participants acquired from a single hospital to verify the practicability of the tracking. The diffusion tensor and shape analysis metrics were calculated for all LRCCP tracts. Differences in the tracking metrics between the left and right hemispheres were compared, and the related white matter asymmetry was discussed. Results The LRCCP templates were successfully created and applied to healthy participants for quantitative analysis. Significantly higher mean fractional anisotropy (FA) values were discovered on the left (L) corticorubral tract [L, 0.43±0.02 vs. right (R), 0.41±0.02; P<0.01] and left dentatorubrothalamic tract (L, 0.47±0.02 vs. R, 0.46±0.02; P<0.01). Significant differences in tract volume and streamline number were observed between the corticopontine, corticorubral, and dentatorubrothalamic tracts. The size of the right corticopontine and corticorubral tracts were smaller, and both had smaller streamline numbers and innervation areas when compared with the contralateral sides. The R dentatorubrothalamic tract showed a larger volume (R, 23,582.47±4,160.71 mm3 vs. L, 19,821.27±2,983.91 mm3; P<0.01) and innervation area (R, 2,117.37±433.98 mm2 vs. L, 1,610.00±356.19 mm2; P<0.01) than did the L side. No significant differences were observed in the rubroolivary tracts. Conclusions This work suggests the feasibility of applying tractography templates of the LRCCP to quantitatively evaluate white matter properties associated with language function. Lateralized diffusion metrics were observed in preliminary experiments. LRCCP tractography-based research may provide a potential quantitative method to better understanding neuroplasticity.
Discriminatory Ability and Clinical Utility of the AJCC7 and AJCC8 Staging Systems for Breast Cancer in a Middle-Income Setting

(1) Background: Differences in access to biomarker testing and cancer treatment in resource-limited settings may affect the clinical utility of the AJCC8 staging system compared to the anatomical AJCC7 system. (2) Methods: A total of 4151 Malaysian women who were newly diagnosed with breast cancer from 2010 to 2020 were followed-up until December 2021. All patients were staged using the AJCC7 and AJCC8 systems. Overall survival (OS) and relative survival (RS) were determined. Concordance-index was used to compare the discriminatory ability between the two systems. (3) Results: Migration from the AJCC7 to AJCC8 staging system resulted in the downstaging of 1494 (36.0%) patients and the upstaging of 289 (7.0%) patients. Approximately 5% of patients could not be staged using the AJCC8 classification. Five-year OS varied between 97% (Stage IA) and 66% (Stage IIIC) for AJCC7, and 96% (Stage IA) and 60% (Stage IIIC) for AJCC8. Concordance-indexes for predicting OS using the AJCC7 and AJCC8 models were 0.720 (0.694–0.747) and 0.745 (0.716–0.774), and for predicting RS they were 0.692 (0.658–0.728) and 0.710 (0.674–0.748), respectively. (4) Conclusions: Given the comparable discriminatory ability between the two staging systems in predicting the stage-specific survival of women with breast cancer in the current study, the continued use of the AJCC7 staging system in resource-limited settings seems pragmatic and justifiable.
Mixtures of Mycotoxins, Phytoestrogens, and Other Secondary Metabolites in Whole-Plant Corn Silages and Total Mixed Rations of Dairy Farms in Central and Northern Mexico

Mycotoxins and endocrine disruptors such as phytoestrogens can affect cattle health, reproduction, and productivity. Most studies of mycotoxins in dairy feeds in Mexico and worldwide have been focused on a few (regulated) mycotoxins. In contrast, less known fungal toxins, phytoestrogens, and other metabolites have been neglected and underestimated. This study analyzed a broad spectrum (>800) of mycotoxins, phytoestrogens, and fungal, plant, and unspecific secondary metabolites in whole-plant corn silages (WPCSs) and total mixed rations (TMRs) collected from 19 Mexican dairy farms. A validated multi-metabolite liquid chromatography/electrospray ionization–tandem mass spectrometric (LC/ESI–MS/MS) method was used. Our results revealed 125 of >800 tested (potentially toxic) secondary metabolites. WPCSs/TMRs in Mexico presented ubiquitous contamination with mycotoxins, phytoestrogens, and other metabolites. The average number of mycotoxins per TMR was 24, ranging from 9 to 31. Fusarium-derived secondary metabolites showed the highest frequencies, concentrations, and diversity among the detected fungal compounds. The most frequently detected mycotoxins in TMRs were zearalenone (ZEN) (100%), fumonisin B1 (FB1) (84%), and deoxynivalenol (84%). Aflatoxin B1 (AFB1) and ochratoxin A (OTA), previously reported in Mexico, were not detected. All TMR samples tested positive for phytoestrogens. Among the investigated dietary ingredients, corn stover, sorghum silage, and concentrate proportions were the most correlated with levels of total mycotoxins, fumonisins (Fs), and ergot alkaloids, respectively.
Case-Based and Quantum Classification for ERP-Based Brain–Computer Interfaces

Low transfer rates are a major bottleneck for brain–computer interfaces based on electroencephalography (EEG). This problem has led to the development of more robust and accurate classifiers. In this study, we investigated the performance of variational quantum, quantum-enhanced support vector, and hypergraph case-based reasoning classifiers in the binary classification of EEG data from a P300 experiment. On the one hand, quantum classification is a promising technology to reduce computational time and improve learning outcomes. On the other hand, case-based reasoning has an excellent potential to simplify the preprocessing steps of EEG analysis. We found that the balanced training (prediction) accuracy of each of these three classifiers was 56.95 (51.83), 83.17 (50.25), and 71.10% (52.04%), respectively. In addition, case-based reasoning performed significantly lower with a simplified (49.78%) preprocessing pipeline. These results demonstrated that all classifiers were able to learn from the data and that quantum classification of EEG data was implementable; however, more research is required to enable a greater prediction accuracy because none of the classifiers were able to generalize from the data. This could be achieved by improving the configuration of the quantum classifiers (e.g., increasing the number of shots) and increasing the number of trials for hypergraph case-based reasoning classifiers through transfer learning.
Salinity Moderated the Toxicity of Zinc Oxide Nanoparticles (ZnO NPs) towards the Early Development of Takifugu obscurus

ZnO nanoparticles (ZnO NPs) have been applied in a wide range of fields due to their unique properties. However, their ecotoxicological threats are reorganized after being discharged. Their toxic effect on anadromous fish could be complicated due to the salinity fluctuations during migration between freshwater and brackish water. In this study, the combined impact of ZnO NPs and salinity on the early development of a typical anadromous fish, obscure puffer (Takifugu obscurus), was evaluated by (i) observation of the nanoparticle characterization in salt solution; (ii) quantification of the toxicity to embryos, newly hatched larvae, and larvae; and (iii) toxicological analysis using biomarkers. It is indicated that with increased salinity level in brackish water (10 ppt), the toxicity of ZnO NPs decreased due to reduced dissolved Zn2+ content, leading to higher hatch rate of embryos and survival rate of larvae than in freshwater (0 ppt). The irregular antioxidant enzyme activity changes are attributed to the toxic effects of nanoparticles on CAT (catalase), but further determination is required. The results of present study have the significance to guide the wildlife conservation of Takifugu obscurus population.
Seismic Rays and Ray Intensities in Inhomogeneous Anisotropic Media

Summary A ray series expansion for seismic body waves propagating in inhomogeneous anisotropic media is studied. Methods for calculation of rays and amplitude coefficients of the ray series are suggested. A seismic ray is described by a system of ordinary differential equations of first order which can be solved by standard numerical techniques. Another system of ordinary differential equations can be used to compute amplitude coefficients. The method may be applied to general anisotropic media in which the elastic parameters are arbitrary continuous functions of all three co-ordinates.
X-Ray Selected Type 2 QSOs and Their Host Galaxies

Abstract We present a large sample of X-ray selected type 2 QSOs from the XMM–COSMOS survey. Type 2 QSOs are luminous AGN whose central engines are obscured by large amounts of gas and dust. The selection criteria we have used are based on high X-ray luminosity (LX > 1044 erg s−1) and heavy obscuration (NH > 1022 cm−2). We derived stellar masses and star-formation rate estimates for the host galaxies from the best fit of the observed photometry. Type 2 QSOs are generally hosted in massive galaxies with on-going star formation.
The Regioselective Conjugation of the 15-nt Thrombin Aptamer with an Optimized Tripeptide Sequence Greatly Increases the Anticoagulant Activity of the Aptamer

Currently, oligonucleotide therapy has emerged as a new paradigm in the treatment of human diseases. In many cases, however, therapeutic oligonucleotides cannot be used directly without modification. Chemical modification or the conjugation of therapeutic oligonucleotides is required to increase their stability or specificity, improve their affinity or inhibitory characteristics, and address delivery issues. Recently, we proposed a conjugation strategy for a 15-nt G-quadruplex thrombin aptamer aimed at extending the recognition interface of the aptamer. In particular, we have prepared a series of designer peptide conjugates of the thrombin aptamer, showing improved anticoagulant activity. Herein, we report a new series of aptamer–peptide conjugates with optimized peptide sequences. The anti-thrombotic activity of aptamer conjugates was notably improved. The lead conjugate, TBA–GLE, was able to inhibit thrombin-induced coagulation approximately six-fold more efficiently than the unmodified aptamer. In terms of its anticoagulant activity, the TBA–GLE conjugate approaches NU172, one of the most potent G-quadruplex thrombin aptamers. Molecular dynamics studies have confirmed that the principles applied to the design of the peptide side chain are efficient instruments for improving aptamer characteristics for the proposed TBA conjugate model.
Interlayer coupling within individual submicron magnetic elements

The interlayer coupling and magnetization reversal of patterned, submicron Co/Au/Ni nanostructures, shaped as diamonds, ellipses, and rectangles, have been investigated using off-axis electron holography and micromagnetic simulations. Antiferromagnetic coupling between the ferromagnetic layers, attributed to the strong Co demagnetization field, was visualized directly. Simulated hysteresis loops overall showed reasonable agreement with the experimental results. Local structural imperfections may be responsible for small discrepancies between the observed magnetization states of the patterned elements and the simulations.
The Effect of In Vitro Digestion on Polyphenolic Compounds and Antioxidant Properties of Sorghum (Sorghum bicolor (L.) Moench) and Sorghum-Enriched Pasta

The phenol content of sorghum is a unique feature among all cereal grains; hence this fact merits the special attention of scientists. It should be remembered that before polyphenols can be used in the body, they are modified within the digestive tract. In order to obtain more accurate data on the level and activity of tested ingredients after ingestion and digestion in the in vivo digestive tract, in vitro simulated digestion may be used. Thus, the aim of this study was to determine the content of polyphenols, flavonoids, and individual phenolic acids, as well as the antiradical properties, of sorghum and sorghum-enriched pasta before and after in vitro simulated gastrointestinal digestion. We observed that the total content of polyphenols decreased after gastric digestion of sorghum, and slightly increased after duodenal digestion. Moreover, the flavonoid content decreased after the first stage of digestion, while antioxidant properties increased after the first stage of digestion and slightly decreased after the second stage. The digestion of polyphenolics in sorghum is completely different to that in pasta—both in varieties with, and without, the addition of sorghum. For pasta, the content of total polyphenols and flavonoids, and free radical scavenging properties, decrease after each stage of digestion.
A Revised Conceptual Model of the Tropical Marine Boundary Layer. Part III: Bragg Scattering Layer Statistical Properties

AbstractThis paper examines the structure and variability of the moisture field in the tropical marine boundary layer (TMBL) as defined by Bragg scattering layers (BSLs) observed with S-band radar. Typically, four to five BSLs were present in the TMBL, including the transition layer at the top of the surface-based mixed layer. The transition-layer depth (~350 m) exhibited a weak diurnal cycle because of changes in the mixed-layer depth. BSLs and the “clear” layers between them each had a median thickness of about 350 m and a lifetime over the radar of 8.4 h, with about 25% having lifetimes longer than 20 h. More (fewer) BSLs were present when surface winds had a more southerly (northerly) component. Both BSLs and clear layers increased in depth with increasing rain rates, with the rainiest days producing layers that were about 100 m thicker than those on the driest days. The analyses imply that the relative humidity (RH) field in the TMBL exhibits layering on scales observable by radar. Satellite and wind.
A Global Study of the 3:1 Resonance Neighborhood: A Search for Unstable Asteroids

The recent discovery of two asteroids with unstable orbits in the neighborhood of the 5 : 2 resonance raises the question whether there exist unstable asteroids in the neighborhood of the more important 3 : 1 asteroidal resonance. The two asteroids have short dynamical lifetimes of about 10 and 50 Myr. Semimajor-axis drift due to the Yarkovsky effect can explain their existence in such a short-lived orbit. Since this effect is not specific to the 5 : 2 resonance, a natural question is whether there exist short-lived asteroids near other resonance borders. This question is interesting because by studying such objects we can better understand the production of near-Earth asteroids (NEAs) via the collision and Yarkovsky processes. We search for short-lived asteroids in the neighborhood of the 3 : 1 resonance. The borders of this resonance and the positions of the asteroids with respect to them are determined by using the mean elliptic planar restricted three-body problem and a method that invokes the concept of a "representative plane. " A semianalytical global study of the orbits for this nonlinear dynamical system is made through this convenient plane. The limit between the circulation and libration or chaotic orbits in this simple problem is taken as the edge of the resonance. We then choose 41 numbered asteroids that are closest to the resonance borders and have inclinations smaller than 10°. The orbits of these asteroids are numerically integrated using the full equations of motion in the gravitational field of the Sun and the planets Jupiter, Saturn, Mars, Earth, and Venus. We find that about 40% of the studied asteroids enter into the 3 : 1 resonance within 100 Myr and are subsequently dynamical eliminated. The existence of a nonnegligible number of asteroids in the 3 : 1 resonance neighborhood implies that a process must be continually acting to replenish this region. We suggest that these asteroids may have wandered to the resonance borders through small semimajor-axis displacements due to the Yarkovsky effect. This result also confirms that asteroids are continually feeding the chaotic 3 : 1 resonance region and consequently the Mars crossers and NEA population.
Toxicological Assessments of a Pandemic COVID-19 Vaccine—Demonstrating the Suitability of a Platform Approach for mRNA Vaccines

The emergence of SARS-CoV-2 at the end of 2019 required the swift development of a vaccine to address the pandemic. Nonclinical GLP-compliant studies in Wistar Han rats were initiated to assess the local tolerance, systemic toxicity, and immune response to four mRNA vaccine candidates encoding immunogens derived from the spike (S) glycoprotein of SARS-CoV-2, encapsulated in lipid nanoparticles (LNPs). Vaccine candidates were administered intramuscularly once weekly for three doses at 30 and/or 100 µg followed by a 3-week recovery period. Clinical pathology findings included higher white blood cell counts and acute phase reactant concentrations, lower platelet and reticulocyte counts, and lower RBC parameters. Microscopically, there was increased cellularity (lymphocytes) in the lymph nodes and spleen, increased hematopoiesis in the bone marrow and spleen, acute inflammation and edema at the injection site, and minimal hepatocellular vacuolation. These findings were generally attributed to the anticipated immune and inflammatory responses to the vaccines, except for hepatocyte vacuolation, which was interpreted to reflect hepatocyte LNP lipid uptake, was similar between candidates and resolved or partially recovered at the end of the recovery phase. These studies demonstrated safety and tolerability in rats, supporting SARS-CoV-2 mRNA-LNP vaccine clinical development.
A Transgenic 5xFAD-M Line of Mice for Dendritic Spine Morphology Analysis in Alzheimer’s Disease

Cognitive impairments are closely related to synaptic loss in Alzheimer’s disease (AD). Functional changes in synaptic contacts are reflected in dendritic spine morphology. Visualization of neurons for morphological studies in vivo is complicated by the fixed brain slice staining or expensive adeno-associated virus injections. We created a transgenic 5xFAD-M line of mice with AD-associated mutations and expressed GFP protein in single neurons of the brain. This mouse model of AD is a useful tool for the simplified visualization of the hippocampal neurons’ morphology in vivo without additional staining manipulations. The progressive elimination of mushroom spines was demonstrated in 5xFAD-M mice between 4 and 5 months of age. Five-month-old 5xFAD-M male and female mice showed change both in the total density and the mushroom spines number compared to sex-matched control. We conclude 5xFAD-M mice can be a useful AD model for studying the mechanisms of synaptic pathology under neurodegenerative conditions and evaluating the effects of potential therapeutic agents on spine morphology as crucial aspect of memory loss in AD.
Metabolism as a New Avenue for Hepatocellular Carcinoma Therapy

Hepatocellular carcinoma is today the sixth leading cause of cancer-related death worldwide, despite the decreased incidence of chronic hepatitis infections. This is due to the increased diffusion of metabolic diseases such as the metabolic syndrome, diabetes, obesity, and nonalcoholic steatohepatitis (NASH). The current protein kinase inhibitor therapies in HCC are very aggressive and not curative. From this perspective, a shift in strategy toward metabolic therapies may represent a promising option. Here, we review current knowledge on metabolic dysregulation in HCC and therapeutic approaches targeting metabolic pathways. We also propose a multi-target metabolic approach as a possible new option in HCC pharmacology.
Impact of the RF Power on the Copper Nitride Films Deposited in a Pure Nitrogen Environment for Applications as Eco-Friendly Solar Absorber

This material can be considered to be an interesting eco-friendly choice to be used in the photovoltaic field. In this work, we present the fabrication of Cu3N thin films by reactive radio-frequency (RF) magnetron sputtering at room temperature, using nitrogen as the process gas. Different RF power values ranged from 25 to 200 W and gas pressures of 3.5 and 5 Pa were tested to determine their impact on the film properties. The morphology and structure were exhaustively examined by Atomic Force Microscopy (AFM), Fourier Transform Infrared (FTIR) and Raman Spectroscopies and X-ray Diffraction (XRD), respectively. The AFM micrographs revealed different morphologies depending on the total pressure used, and rougher surfaces when the films were deposited at the lowest pressure; whereas FTIR and Raman spectra exhibited the characteristics bands related to the Cu-N bonds of Cu3N. Such bands became narrower as the RF power increased. XRD patterns showed the (100) plane as the preferred orientation, that changed to (111) with the RF power, revealing a worsening in structural quality. Finally, the band gap energy was estimated from transmission spectra carried out with a Perkin Elmer 1050 spectrophotometer to evaluate the suitability of Cu3N as a light absorber. The values obtained demonstrated the capability of Cu3N for solar energy conversion applications, indicating a better film performance under the sputtering conditions 5.0 Pa and RF power values ranged from 50 to 100 W.