Miracle-dz/UniFAR-FTUs huggingface dataset:
Experimental evidence that even minor livestock trampling has severe effects on land snail communities in forest remnants

Summary Land-use intensification is increasing dramatically in production systems world-wide. Livestock production is an important component of production land use, and increases in livestock densities have had a wide range of negative consequences. The off-site effects of livestock grazing and trampling on native vegetation adjacent to pastoral land have received less attention than on-farm effects. Moreover, where significant ecological effects of livestock spillover have been identified, the mechanistic determinants of these effects have not typically been investigated. Here, we tested the mechanistic drivers of livestock trampling effects on land snail communities in forest remnants using simulated trampling under field conditions. We used a factorial combination of leaf-litter manipulation and trampling treatments to partition different causal drivers of livestock impacts on land snail communities and related them to five environmental variables that are altered by livestock. We show that even very low frequency trampling caused severe changes to land snail communities. Land snail density, even under the lowest trampling frequency, declined by an average of 42 individuals m−2 and land snail species richness decreased by an average of 10 species per plot compared with control plots. The underlying drivers of changes in land snail communities varied, but were primarily linked to leaf-litter mass, rather than soil compaction. Synthesis and applications. Overall, these results suggest that even minimal disturbance by livestock has large effects on land snail communities, but the underlying drivers of these effects require further investigation in longer duration and more intensive studies. Our results provide strong support for livestock exclusion as an important management tool for native forest remnants embedded within production landscapes.
Dominance rank but not body size influences female reproductive success in mountain gorillas

According to life history theory, natural selection has shaped trade-offs for allocating energy among growth, reproduction and maintenance to maximize individual fitness. In social mammals body size and dominance rank are two key variables believed to influence female reproductive success. However, few studies have examined these variables together, particularly in long-lived species. Previous studies found that female dominance rank correlates with reproductive success in mountain gorillas (Gorilla beringei beringei), which is surprising given they have weak dominance relationships and experience seemingly low levels of feeding competition. It is not currently known whether this relationship is primarily driven by a positive correlation between rank and body size. We used the non-invasive parallel laser method to measure two body size variables (back breadth and body length) of 34 wild adult female mountain gorillas, together with long-term dominance and demography data to investigate the interrelationships among body size, dominance rank and two measures of female reproductive success (inter-birth interval N = 29 and infant mortality N = 64). Using linear mixed models, we found no support for body size to be significantly correlated with dominance rank or female reproductive success. Higher-ranking females had significantly shorter inter-birth intervals than lower-ranking ones, but dominance rank was not significantly correlated with infant mortality. Our results suggest that female dominance rank is primarily determined by factors other than linear body dimensions and that high rank provides benefits even in species with weak dominance relationships and abundant year-round food resources. Future studies should focus on the mechanisms behind heterogeneity in female body size in relation to trade-offs in allocating energy to growth, maintenance and lifetime reproductive success.
Semi-Automatic Classification and Duplicate Detection From Human Loss News Corpus

Automatic news repository collection systems involve a news crawler that extracts news from different news portals, subsequently, these news need to be processed to figure out the category of a news article e.g. sports, politics, showbiz etc. In this process there are two main challenges first one is to place a news article under the right category of news, while the second one is to detect a duplicate news, i.e. when the news are being extracted from multiple sources, it is highly probable to get the same news from many different portals, resulting into duplicate news; failing to which may result into inconsistent statistics obtained after pre-processing the news text. This problem becomes more pertinent when we deal with human loss news involving crime, accident etc. related news articles. As the system may count the same news many times resulting into misleading statistics. In order to address these problems, this research presents the following contributions. Firstly, a news corpus comprising of human loss news of different categories has been developed by gathering data from different sources of well-known and authentic news websites. The corpus also includes a number of duplicate news. Secondly, a comparison of different classification approaches has been conducted to empirically find out the best suitable text classifier for the categorization of different sub-categories of human loss news. Lastly, methods have been proposed and compared to detect duplicate news from the corpus by involving different pre-processing techniques and widely used similarity measures, cosine similarity, and Jaccard’s coefficient. The results show that conventional text classifiers are still relevant and perform well in text classification tasks as MNB has given 89.5% accurate results. While, Jaccard coefficient exhibits much better results than Cosine similarity for duplicate news detection with different pre-processing variations with an average accuracy of 83.16%.
The evolution of communal roosting in birds: origin and secondary losses

Three main benefits are thought to underlie communal roosting in birds: a reduction in thermoregulation demands, a decrease in predation risk, and an increase in foraging efficiency. I investigated interspecific variation in communal roosting tendencies across categories of several ecological factors to examine the relevance of each functional hypothesis in the evolutionary transition to communal roosting and the secondary reversal to solitary roosting habits. The study phylogenetic tree included 30 families and 437 species. Evolutionary transitions to communal roosting occurred more often on branches with flocking species and with larger species but were not associated with diet, territoriality, geographical area, or time of day. The association with flocking activities suggests that increased foraging efficiency, a factor thought to operate through the formation of flocks, may have been a key factor in the origin of avian communal roosting. However, several transitions to communal roosting occurred on branches with nonflocking species, indicating that foraging efficiency may not be the only factor involved in the evolution of communal roosting. Secondary losses of communal roosting habits occurred on several branches, with a concomitant loss of flocking behavior and a tendency to exhibit territorial behavior and nocturnal foraging. Secondary losses suggest that communal roosting is costly to perform and maintain and may be lost when an asocial selection regime operates. The large number of exceptions to the above patterns may force a reevaluation of current functional hypotheses about communal roosting in birds.
Analysis of Weld Cracking in a Low-Pressure Steam Pipe

A weld cracking of the outlet pipe occurred during the operation of a low-pressure steam super-heater in the purification device. It was found that many cracks were perpendicular to the weld, which affected the equipment safe operation. In order to investigate the failure cause, the samples containing weld and cracks in the outlet pipe were cut. The experiments, including chemical composition analysis, mechanical properties testing, scanning electron microscope observation, energy spectrum analysis and metallographic analysis, were performed. The results showed that the corrosion products had loose structure, mainly consisting of iron, sodium and phosphorus oxides. The metallographic results of the fracture section indicated that there existed a mixed cracks of trans-granular and inter-granular mode, along with stepped crack characteristics. Therefore, it is believed that the weld transverse cracking in the outlet pipe may be resulted by both of alkali stress corrosion cracking and the hydrogen induced cracking. According to the failure cause analysis, the corresponding suggestions are given, such as welding, operation process and inspection.
Characteristics of Modified β‐Cyclodextrin Bound to Cellulose Powder

Monochlorotriazinyl-β-cyclodextrin (MCT-β-CD) was covalently bonded to cellulose powder. The amount of MCT-β-CD bonded to cellulose could be determined by infrared spectroscopy. The coupling reaction was characterized as a physical adsorption of the MCT-β-CD on the cellulose powder followed by an apparently zero order chemical reaction. The reaction rate constant was found to be k = 6.43 . 10 -4 ± 0.11 . 10 -4 g g -1 s -1 . The immobilized cyclodextrin was able to include and release d-limonene as a model flavor compound. The maximum molar inclusion ratio was 0.85, which is the same inclusion ratio as for d-limonene in native β-cyclodextrin. The release rates of d-limonene included in the fixed MCT-β-CD were monitored at various relative humidities and 50 °C. The release kinetics could be modeled using the Avrami equation. These results demonstrate that flavors as well as other hydrophobic compounds can be included and released from MCT-p-CD immobilized on cellulose.
Inclusion of Limited Amounts of Extruded Legumes Plus Cereal Mixes in Normocaloric or Obesogenic Diets for Rats: Effects on Lipid Profile

Overweight and obesity are regarded as world epidemics and are major risk factors for a number of chronic diseases, including diabetes, cardiovascular diseases, and cancer. Two new highly palatable extruded mixes based on rice and pea (Pisum sativum) or kidney bean (Phaseolus vulgaris) meals were incorporated into normocaloric or obesogenic diets for rats at a low inclusion level (25%). Our purpose was to evaluate the effects of dietary incorporation of this new food ingredient on lipid profile. Organs (heart, liver, kidneys, spleen, stomach, small intestine, colon, cecum) and visceral fat relative weights were different (p < 0.01) from controls for animals fed the obesogenic diets and in rats fed extruded diets with respect to controls. Faecal excretion of bile acids was higher (p < 0.01) for rats fed extruded mixes compared with controls. The inclusion of extruded mixes replacing part of the casein in the control diet lowered liver cholesterol and triglycerides (p < 0.001) and plasma low-density lipoprotein (LDL; p < 0.01) values, although plasma high-density lipoprotein (HDL) was unaltered. Both the inclusion of extruded mixes and the use of obesogenic diets resulted in significantly (p < 0.001) different long chain fatty acid (LCFA) profiles in liver and visceral fat. Incorporating extruded legume plus cereal mixes beneficially influenced lipid metabolism, and would therefore deserve closer attention in human intervention studies, particularly with adolescents. To our knowledge, this is the first report on the nutritional and physiological effects of extruded legume plus cereal mixes.
Aflatoxigenesis induced in Aspergillus flavus by oxidative stress and reduction by phenolic antioxidants from tree nuts.

Almonds, pistachios, and walnuts grown in California have an aggregate value of over $3.3 billion, with a large proportion of the crop being exported. Mycotoxin contamination affects this value, because importing nations, and in particular the European Community (EC), apply strict regulatory levels for aflatoxins, formed by infection of the product by Aspergillus species. Conformance with such limits can best be achieved by capitalising on natural resistance factors inherent to the nuts. Differential resistance of tree nut species to aflatoxin formation, with walnuts being least susceptible, led to research which established that the hydrolysable tannins in walnut pellicle were responsible for this effect. This observation has now been extended to show that the addition to Aspergillus flavus growth media of natural antioxidants present in tree nuts, such as hydrolysable tannins, flavonoids and phenolic acids, decrease maximum aflatoxin by as much as 99.8%. There is evidence that aflatoxin formation is exa.
Combined approach based on principal component analysis and canonical discriminant analysis for investigating hyperspectral plant response

Hyperspectral (HS) data represents an extremely powerful means for rapidly detecting crop stress and then aiding in the rational management of natural resources in agriculture. However, large volume of data poses a challenge for data processing and extracting crucial information. Multivariate statistical techniques can play a key role in the analysis of HS data, as they may allow to both eliminate redundant information and identify synthetic indices which maximize differences among levels of stress. In this paper we propose an integrated approach, based on the combined use of Principal Component Analysis (PCA) and Canonical Discriminant Analysis (CDA), to investigate HS plant response and discriminate plant status. The approach was preliminary evaluated on a data set collected on durum wheat plants grown under different nitrogen (N) stress levels. Hyperspectral measurements were performed at anthesis through a high resolution field spectroradiometer, ASD FieldSpec HandHeld, covering the 325-1075 nm region. Reflectance data were first restricted to the interval 510-1000 nm and then divided into five bands of the electromagnetic spectrum [green: 510-580 nm; yellow: 581-630 nm; red: 631-690 nm; red-edge: 705-770 nm; near-infrared (NIR): 771-1000 nm]. PCA was applied to each spectral interval. CDA was performed on the extracted components to identify the factors maximizing the differences among plants fertilised with increasing N rates. Within the intervals of green, yellow and red only the first principal component (PC) had an eigenvalue greater than 1 and explained more than 95% of total variance; within the ranges of red-edge and NIR, the first two PCs had an eigenvalue higher than 1. Two canonical variables explained cumulatively more than 81% of total variance and the first was able to discriminate wheat plants differently fertilised, as confirmed also by the significant correlation with aboveground biomass and grain yield parameters. The combined approach proved to be effective, being able to synthesise the redundant radiometric information in a reduced number of indicators of plant nutritional status, which could be utilized to delineate homogeneous within-field areas to be submitted to site-specific fertilization.
Left Distal Radial Artery Access Site in Primary Percutaneous Coronary Intervention: Is It Safe?

Background: Left distal radial artery access site has emerged as a new technique for coronary angiography procedures. Aims: We aimed at assessing its applicability as an alternative way for primary percutaneous coronary interventions in ST-elevation myocardial infarction. Study Design: Retrospective observational cohort study. Methods: Left distal radial artery was used as an access site in 30 consecutive ST-elevation myocardial infarction patients for primary coronary intervention. It was used by experienced operators who were unaware of the study. All patients had a prominent pulse in their left forearm and distal radial artery. Each patient’s left arm was gently bent into his/her right groin with comfortable position of the hand. The operator/s stood at the right side of the patient where both could make the arterial puncture. Demographic features and complications were recorded during the hospital stay. Results: Mean age of patients was 58 years with a male gender predominance of 87%. Fifteen patients were diagnosed of Inferior elevation myocardial infarction, 14 patients of Anterior, and one of Lateral elevation myocardial infarction. The most common culprit artery was the left anterior descending coronary artery (14 patients). Six patients were in KILLIP class II on admission and only one with Anterior elevation myocardial infarction was in severe pulmonary edema (KILLIP III) during intervention. All the procedures were successfully contemplated with 6 French Judkins catheters. Brachial spasm occurred in one patient which was resolved with intra-arterial nitrate. Transfemoral approach was changed to left distal radial access in 4 patients due to severe bilateral iliac artery disease. Mean puncture time was 37.36 seconds. There was no radial occlusion, hematoma, hand neurologic deficit or bleeding. Patients were discharged on an average duration of 4.2 days. Conclusion: Left distal radial artery can be used as an alternative safe and feasible access site for successful primary coronary interventions provided that it is performed by experienced operators.
CD8α is an activation marker for a subset of peripheral CD4 T cells

Rat CD4 T lymphocytes express CD8α upon activation. Here, we show that double‐positive cells express CD8α α homodimers, and we study their phenotype and function. Most activated CD4+ lymphocytes expressing CD8α are recent thymic emigrants. Accordingly, most activated CD4 single‐positive thymocytes express CD8α, and thymectomy and aging decrease the frequency of CD4+CD8α+ lymphocytes. However, CD8 induction is not restricted to CD4+ recent thymic emigrants. CD4+CD8α+ and CD4+CD8α–cells were generated in vitro from naive or from primed donors and, to study their function, were transferred to normal rats. Both cell types helped primary humoral responses, but only CD4+CD8α– cells promoted secondary responses. Thus, memory CD4 T cells mediating antibody responses and some naive CD4+ lymphocytes do not express CD8α. In addition, CD4+CD8α+ cells produce mainly Th1 cytokines while CD4+CD8α– cells produce IL‐10 and showed a sustained proliferative response. Hence, CD8α expressionafter activation distinguishes two distinct CD4 T cell subsets.
Softness and weight from shape: Material properties inferred from local shape features

Object shape is an important cue to material identity and for the estimation of material properties. Shape features can affect material perception at different levels: at a microscale (surface roughness), mesoscale (textures and local object shape), or megascale (global object shape) level. Examples for local shape features include ripples in drapery, clots in viscous liquids, or spiraling creases in twisted objects. Here, we set out to test the role of such shape features on judgments of material properties softness and weight. For this, we created a large number of novel stimuli with varying surface shape features. We show that those features have distinct effects on softness and weight ratings depending on their type, as well as amplitude and frequency, for example, increasing numbers and pointedness of spikes makes objects appear harder and heavier. By also asking participants to name familiar objects, materials, and transformations they associate with our stimuli, we can show that softness and weight judgments do not merely follow from semantic associations between particular stimuli and real-world object shapes. Rather, softness and weight are estimated from surface shape, presumably based on learned heuristics about the relationship between a particular expression of surface features and material properties. In line with this, we show that correlations between perceived softness or weight and surface curvature vary depending on the type of surface feature. We conclude that local shape features have to be considered when testing the effects of shape on the perception of material properties such as softness and weight.
Nutritional Status and Bone Microarchitecture in a Cohort of Systemic Sclerosis Patients

Systemic sclerosis (SSc) is a connective tissue disease characterized by initial microvascular damage, immune system activation and progressive fibrosis with insufficiency of internal organs. Gastrointestinal (GI) involvement is characterized by atrophy of the smooth muscle and small bowel hypomotility, mainly resulting from an autonomic nerve dysfunction. These modifications significantly affect gut transit and nutrient absorption, thus leading to malnutrition deficit induced by malabsorption. Nutritional deficit induced by malabsorption might also lead to bone alterations. This study aims to evaluate the relationship between malnutrition and bone status. Thirty-six postmenopausal female patients fulfilling the ACR 2013 criteria for SSc underwent dual-energy X-ray absorptiometry scan (DXA) to detect quantitative lumbar spine bone mineral density (BMD) and trabecular bone score (TBS) analysis to detect bone quality. Data from DXA also allow to assess body composition and provide several quantitative parameters, including free fat mass index (FFMI) that identifies the patient with malnutrition (values <15 kg/m2 in women and 17 kg/m2 in men), according to the ESPEN criteria. Body mass index (BMI) was calculated for all SSc patients and every patient completed a diary reporting GI symptoms. Two groups of SSc patients with or without diagnosed malnutrition according to FFMI parameter were identified. Malnourished SSc patients showed significantly lower weight (p = 0.01) and BMI (p = 0.001), as well as lower serum levels of hemoglobin (p = 0.009), albumin (p = 0.002), PTH (p = 0.02) and 25OH-vitamin D (p = 0.008). DXA analysis showed significantly lower lumbar L1-L4 T-score (p = 0.009) and BMD values (p = 0.029) in malnourished SSc patients. Consistently, TBS values were significantly lower in malnourished patients (p = 0.008) and correlated with BMD (at any site) and serum albumin levels (p = 0.02). In addition, FFMI positively correlated with bone parameters as well as with symptoms of intestinal impairment in malnourished SSc patients. Finally, GI symptoms significantly correlated with BMD but not with TBS. This pilot study shows that in malnourished SSc patients (2015 ESPEN criteria: FFMI<15 kg/m2), an altered bone status significantly correlates with GI involvement, in terms of symptoms being mainly due to intestinal involvement together with the presence of selected serum biomarkers of malnutrition.