Miracle-dz/UniFAR-FTUs huggingface dataset:
Skillful seasonal prediction of Yangtze river valley summer rainfall

China suffers from frequent summer floods and droughts, but seasonal forecast skill of corresponding summer rainfall remains a key challenge. In this study, we demonstrate useful levels of prediction skill over the Yangtze river valley for summer rainfall and river flows using a new high resolution forecast system. Further analysis of the sources of predictability suggests that the predictability of Yangtze river valley summer rainfall corresponds to skillful prediction of rainfall in the deep tropics and around the Maritime Continent. The associated dynamical signals favor increased poleward water vapor transport from South China and hence Yangtze river valley summer rainfall and river flow. The predictability and useful level of skill demonstrated by this study imply huge potential for flooding and drought related disaster mitigation and economic benefits for the region based on early warning of extreme climate events.
The Management of Oral Anticoagulant Therapy: The Patient’s Point of View

Summary The aims of this study were to investigate on the general adhesion of the patients to oral anticoagulant therapy, and particularly on the quality of life of our patients, the doctor-patient relationship and the Centre-patient relationship. For this purpose we administered a questionnaire containing 17 main questions each with a maximum of 4 secondary questions. The questionnaire was administered to two groups of 127 and 137 oral anticoagulated patients (127 males and 137 females, mean age 55 ± 19 years), followed at two Anticoagulation Clinics, in two Italian cities, Cagliari (Sardinia) and Padua (North East Italy). The cities differed in the number of patients monitored and the management modalities of anticoagulation. The results show that oral anticoagulant therapy does not limit the life-style of the patients. Only 11% of the patients complain of limitations to their daily life. Fifty-two percent believe their health has improved, and 87% are not afraid of negative consequences. The doctor-patient relationship is considered very important by 96% of patients. Seventy-eight percent refer to the Anticoagulation Clinic also for other health problems, 93% consider it important to be assessed by the doctor at the Anticoagulation Clinic, while 83% believe the doctor should always hand out the results personally. We conclude that in general oral anticoagulant therapy is accepted by the majority of patients, in spite of the need for periodic monitoring. The doctor-patient relationship should be taken into account, even in the case of a monitored, computer-assisted method of dose-adjustment.
Patterns of internal and external tetraethylammonium block in four homologous K+ channels.

Tetraethylammonium (TEA) is a small ion that is thought to block open K+ channels by binding either to an internal or to an external site. For this reason, it has been used to probe the ion conduction pathway or pore of K+ channel mutants and a K+ channel chimera. The results suggested that the region between transmembrane segments 5 and 6 (S5-S6 linker) was involved in the formation of both the internal and the external TEA binding sites and the K+ conduction pathway. Therefore, we compared internal and external TEA block of the currents expressed in Xenopus oocytes injected with RNAs from four related K+ channel clones, DRK1, RCK1, RCK2, and r-NGK2, which have only subtle structural differences in the S5-S6 linker. r-NGK2 was the most sensitive to external TEA and the least sensitive to internal TEA application. For DRK1 the profile was reversed. RCK1 was blocked equally well from either side, whereas RCK2 was more strongly blocked by internal TEA. The internal block was voltage dependent, whereas the external block was virtually voltage independent. As predicted from block of whole-oocyte currents, internal TEA produced a slow block of DRK1 and RCK2 single-channel currents but had almost no effect on r-NGK2 single-channel currents. Tetrapentylammonium produced a stronger block than TEA at the internal site, and the block was relieved by inward K+ currents, therefore suggesting that the internal TEA binding site is located within the K+ conduction pathway. These results, together with the TEA block of single-channel currents, establish what has until now been inferred by extrapolation from other studies, i.e., that TEA is an open-channel blocker in K+ channel clones. DRK1 mutants with extensive amino- and carboxyl-terminal deletions showed the same blocking profile as the parent DRK1. We conclude that TEA blocks these K+ channels at two sites, which define the inner and outer mouths of the channel pores. Comparison of the primary amino acid sequences in the S5-S6 linker suggests which residues may be responsible for the different patterns of TEA block.
Quantitative Relationships of Site to Site Interaction in Escherichia coli d-3-Phosphoglycerate Dehydrogenase Revealed by Asymmetric Hybrid Tetramers*

A set of asymmetric hybrid tetramers of Escherichia coli d-3-phosphoglycerate dehydrogenase (PGDH) have been made by gene co-expression and KSCN-induced dimer exchange. These tetramers contain varied numbers of active sites and effector binding sites arranged in different orientations within the tetramer. They reveal that PGDH displays half-of-the-sites activity with respect to its active sites and that the two sites that are active at any particular time lie in subunits on either side of the nucleotide binding domain interface. Half-of-the-sites functionality is also observed for the effector even though all four sites eventually bind effector. That is, only two effector sites need to be occupied for maximum inhibition. Binding of the last two effector molecules does not contribute functionally to inhibition of activity. Furthermore, positive cooperativity of inhibition of activity by the effector is completely dependent on the positive cooperativity of binding of the effector. Binding of the first effector molecule produces a conformational change that essentially completely inhibits the active site within the subunit to which it binds and produces an approximate 33% inhibition of the active site in the subunit to which it is not bound. Binding of the second effector at the opposite regulatory domain interface completes the inhibition of activity. This simple relationship defines the positional and quantitative influence of effector ligand binding on activity and can be used to predict the maximum level of inhibition of individual hybrid tetramers. In addition, the site-specific quantitative relationship of effector binding to individual active sites can be used to model the inhibition profile with relatively good agreement. These simple rules for the site to site interaction in PGDH provide significant new insight into the mechanism of allostery of this enzyme.
Exogenous effects and endogenous production of endothelin in cardiac myocytes: potential significance in heart failure.

Increased plasma concentrations of endothelin have been identified in patients and animals with severe congestive heart failure (CHF). However, whether and to what extent increased endothelin (ET) concentrations influence left ventricular (LV) myocyte contractility, ET-receptor subtype density, and endogenous ET production with the development of CHF remains unclear. Accordingly, myocyte contractile function, response to ET, sarcolemmal ET-receptor density, and myocyte ET production were examined in pigs following the development of pacing-induced CHF (240 beats/min, 3 wk, n = 8) and in controls (n = 8). With CHF, plasma ET increased over threefold. In the presence of ET (10-500 pM), myocyte contractility increased in a dose-dependent manner in control myocytes but decreased in CHF myocytes. For example, in the presence of 200 pM ET, velocity of shortening increased by 32.8 +/- 2.3 microns/s in controls but decreased by 8.3 +/- 2.2 microns/s with CHF. LV sarcolemmal ET-receptor density was primarily of the ETA-receptor subtype in controls (96 +/- 1.0%) and was unchanged with CHF. In quiescent myocyte preparations, control myocytes secreted ET (2.29 +/- 0.45 amol.cell-1.h-1), which was similar in CHF myocytes. These findings suggest that the production of ET may have important and potentially differential effects on contractile function with the development of CHF.
Emotional functioning in anorexia nervosa patients: Adolescents compared to adults

Studies concerning eating disorder patients have revealed the presence of alexithymia, depressive, and anxiety disorders. We compared these aspects of emotional functioning in two groups of anorexia nervosa (AN) patients: adolescents vs. adults. Forty‐eight adolescent anorexia nervosa patients (ADO) and 23 adult anorexia nervosa patients (ADU) completed a battery of tasks and questionnaires to measure these different aspects of emotional functioning and to control for differences of a more general cognitive nature. Both groups showed marked resemblance; both had high alexithymia scores and performed worse on emotional tasks measuring aspects of alexithymia. Furthermore, both groups showed high percentages of depressive and anxiety disorders, with the ADU group scoring only higher on specific and social phobia than the ADO group. Adult and adolescent AN patient groups do not differ substantially with respect to emotional functioning. Depression and Anxiety 19:35–42, 2004. © 2004 Wiley‐Liss, Inc.
Effect of home-based light treatment on persons with dementia and their caregivers

Sleep disorders are problematic for persons with dementia and their family caregivers. This randomized controlled trial with crossover evaluated the effects of an innovative blue-white light therapy on 17 pairs of home-dwelling persons with dementia and their caregivers. Subjects with dementia received blue-white light and control (‘red-yellow’ light) for six weeks separated by a four-week washout. Neither actigraphic nor most self-reported sleep measures significantly differed for subjects with dementia. For caregivers, both sleep and role strain improved. No evidence of retinal light toxicity was observed. Six weeks of modest doses of blue-white light appear to improve sleep in caregivers but not in persons with dementia. Greater or prolonged circadian stimulation may be needed to determine if light is an effective treatment for persons with dementia.
Marker-Based Estimates Reveal Significant Nonadditive Effects in Clonally Propagated Cassava (Manihot esculenta): Implications for the Prediction of Total Genetic Value and the Selection of Varieties

In clonally propagated crops, nonadditive genetic effects can be effectively exploited by the identification of superior genetic individuals as varieties. Cassava (Manihot esculenta Crantz) is a clonally propagated staple food crop that feeds hundreds of millions. We quantified the amount and nature of nonadditive genetic variation for three key traits in a breeding population of cassava from sub-Saharan Africa using additive and nonadditive genome-wide marker-based relationship matrices. We then assessed the accuracy of genomic prediction for total (additive plus nonadditive) genetic value. We confirmed previous findings based on diallel crosses that nonadditive genetic variation is significant for key cassava traits. Specifically, we found that dominance is particularly important for root yield and epistasis contributes strongly to variation in cassava mosaic disease (CMD) resistance. Further, we showed that total genetic value predicted observed phenotypes more accurately than additive only models for root yield but not for dry matter content, which is mostly additive or for CMD resistance, which has high narrow-sense heritability. We address the implication of these results for cassava breeding and put our work in the context of previous results in cassava, and other plant and animal species.
Executive Memory Dysfunctions Following Mild Traumatic Brain Injury

ObjectivesTo explore the contribution of executive dysfunctions to mnemonic problems in adults with mild traumatic brain injury (MTBI). DesignProspective quasiexperimental between-groups design. ParticipantsNinety-nine persons with MTBI were compared to 90 control group participants matched for gender, age, and education. SettingTwo Canadian brain injury rehabilitation programs. Main Outcome MeasureCalifornia Verbal Learning Test. ResultsParticipants with MTBI showed a significant deficit in free recall on the California Verbal Learning Test but performed similarly to the comparison group on the recognition task. Furthermore, the participants with MTBI were less likely to use semantic clustering as a memorizing strategy and made more intrusion errors and false-positive errors on the recognition task. ConclusionsWhile the scores for the participants with MTBI are only slightly lower than the norm, they demonstrate that MTBI has a negative effect on mnemonic performance. The results are explained in terms of a deficit in registration/retrieval processes rather than a malfunction of the storage processes. This supports the initial hypothesis that executive dysfunctions are detrimental to the quality of mnemonic functions in patients with MTBI.
DNA/chitosan nanocomplex as a novel drug carrier for doxorubicin

The present study was to investigate the potentials of DNA/chitosan nanocomplexes as a carrier for small drug delivery. Two highly water-soluble chitosans (87 kDa and 18 kDa) were prepared and labeled with fluorescein isothiocyanate (FITC). DNA/chitosan nanocomplexes were prepared by mixing salmon testes DNA and the FITC labeled chitosan (FITC-chitosan) and their biophysical properties and biodistribution in vivo were then investigated. The molecular weight of chitosan and the ratio of the positive amino group of chitosan to the negative phosphate group of DNA (N/P ratio) influenced the physical properties of the nanocomplexes. The fluorescence intensity of both types of the free FITC-chitosan decreased rapidly within 4 hr post-injection. In contrast, the DNA/chitosan nanocomplexes were accumulated in the liver and kidneys and remained at a relatively high stable level in these tissues and in blood up to 24 hr post-injection. This study also assessed the stability of the anti-cancer drug doxorubicin (DOX) when it was conjugated to chitosan to form a chitosan-doxorubicin conjugate (chi-DOX), which was then mixed with DNA to form a DNA/chitosan-doxorubicin nanocomplex (DNA/chi-DOX). Both the chi-DOX and DNA/chi-DOX complexes exerted cytotoxic effects on HeLa, HepG2, QGY-7703, and L02 cells, while the non-malignant L02 cells were less sensitive to the DNA-containing complex than to the chi-DOX complex, suggesting possible selectivity. Studies in tumor-bearing animals demonstrated that DNA/chi-DOX could efficiently deliver doxorubicin to the tumor and liver, implying that the DNA/chitosan nanocomplex may represent a novel drug carrier.
No exit: an evaluation of measures of physician attrition.

OBJECTIVE To validate physicians' self-reported intentions to leave clinical practice and the American Medical Association (AMA) Masterfile practice status variable as measures of physician attrition, and to determine predictors of intention to leave, and actual departure from, clinical practice. DATA SOURCES Survey of specialist physicians in urban California (1998); the AMA Physician Masterfile (2001); and direct ascertainment of physician practice status (2001). STUDY DESIGN Physicians' intention to leave clinical practice by 2001 (self-reported in 1998) was tested as a measure of each physician's actual practice status in 2001 (directly ascertained). Physician practice status according to the 2001 AMA Masterfile was also tested as a measure of physicians' actual practice status in 2001. Multivariate regression was used to predict both physicians' intentions to leave clinical practice and their actual departure. DATA COLLECTION/EXTRACTION METHODS AMA Masterfile data on 2001 practice status were obtained for 967 of 968 physician respondents to the 1998 survey. Actual practice status for 2001 was directly ascertained for 957. PRINCIPAL FINDINGS The sensitivity of Masterfile practice status as a measure of actual departure from clinical practice was 9.0 percent, and the positive predictive value was 52.9 percent. Allowing for a two-year reporting lag did not change this substantially. Self-reported intention to leave clinical practice had a sensitivity of 73.3 percent and a positive predictive value of 35.4 percent as a measure of actual departure from practice. The strongest predictor of both intention to leave clinical practice and actual departure from practice was older age. Physician dissatisfaction had a strong association (OR=5.6) with intention to leave clinical practice, but was not associated with actual departure from practice. CONCLUSIONS Our findings call into question the accuracy of both AMA Masterfile data and physicians' self-reported intentions to leave as measures of physician attrition from clinical practice. Research using these measures should be interpreted with caution. Self-reported intention to leave practice may be more of a proxy for dissatisfaction than an accurate predictor of actual behavior.
Systemic and forearm vascular resistance changes after upright bicycle exercise in man.

1. Blood pressure, cardiac function and forearm blood flow following voluntary maximal upright bicycle exercise were studied in thirteen normal volunteers in a cross‐over design against a control day. 2. After exercise there was a short‐lived (5‐10 min) increase in systolic blood pressure, peak aortic blood velocity and aortic acceleration suggesting a persistence of the positive inotropic influence of exercise. 3. Systemic vasodilation, which was seen immediately exercise stopped, lasted at least 60 min. This was associated with a reduction in diastolic blood pressure for the whole hour. After 30 min systolic blood pressure was also reduced. Heart rate and cardiac output were still significantly elevated and systemic vascular resistance still reduced at 60 min post‐exercise. 4. A non‐exercising limb vascular bed (forearm) showed a marked vasodilation for 1 h after predominately leg exercise indicating the presence of a vasodilatory influence affecting vascular beds other than the exercising muscle groups.
Adoption of increasing block tariffs (IBTs) among urban water utilities in major cities in China

Abstract Increasing block tariffs (IBTs) have been officially endorsed by the Chinese government since 1998, but by the end of 2013, fewer than half of the country’s 36 major cities had adopted IBTs as the tariff structure for their water utilities. Our study examines the main factors affecting these cities’ decisions on whether or not to adopt IBTs, considering both general characteristics of the cities and characteristics of their water utilities. A discrete-time hazard model is used for empirical analysis. Results show that factors most likely to affect a major city’s decision on IBT adoption include the city’s economic development as measured by growth rate of GDP; changes in the relative importance of the domestic water sector; the city’s wastewater treatment rate and leakage rate; and business structure of the water utility.
Modeling time‐varying effects with generalized and unsynchronized longitudinal data

We propose novel estimation approaches for generalized varying coefficient models that are tailored for unsynchronized, irregular and infrequent longitudinal designs/data. Unsynchronized longitudinal data refer to the time‐dependent response and covariate measurements for each individual measured at distinct time points. Data from the Comprehensive Dialysis Study motivate the proposed methods. We model the potential age‐varying association between infection‐related hospitalization status and the inflammatory marker, C‐reactive protein, within the first 2 years from initiation of dialysis. We cannot directly apply traditional longitudinal modeling to unsynchronized data, and no method exists to estimate time‐varying or age‐varying effects for generalized outcomes (e.g., binary or count data) to date. In addition, through the analysis of the Comprehensive Dialysis Study data and simulation studies, we show that preprocessing steps, such as binning, needed to synchronize data to apply traditional modeling can lead to significant loss of information in this context. In contrast, the proposed approaches discard no observation; they exploit the fact that although there is little information in a single subject trajectory because of irregularity and infrequency, the moments of the underlying processes can be accurately and efficiently recovered by pooling information from all subjects using functional data analysis. We derive subject‐specific mean response trajectory predictions and study finite sample properties of the estimators. Copyright © 2013 John Wiley & Sons, Ltd.
Asymmetrical Behavioral Response Towards Two Boron Toxicants Depends on the Ant Species (Hymenoptera: Formicidae)

ABSTRACT Urban ants are a worldwide critical household pests, and efforts to control them usually involve the use of alimentary baits containing slow-acting insecticides. A common toxicant used is boron, either as borax or boric acid. However, the presence of these compounds can affect the consumption of baits by reducing their acceptance and ingestion. Moreover, as feeding motivation varies widely, according not only to food properties but also to colony conditions, bait consumption might be diminished further in certain situations. In this study, we compared the feeding response of ants toward two boron toxic baits (boric acid and borax) in low motivation situations that enhance any possible phago-deterrence the baits may produce. Most studies investigating bait ingestion evaluate whole nests or groups of ants; here, we analyzed the individual ingestion behavior and mortality of the Argentine ant, Linepithema humile (Mayr), and the carpenter ant, Camponotus mus (Roger), for two boron baits, to detect which compound generates a higher rejection in each of these species. Although these two species have similar feeding habits, our results showed that ants under low motivation conditions reduced the acceptance and consumption of the toxic baits asymmetrically. While L. humile mostly rejected the borax, C. mus rejected the boric acid. These results denote the importance of considering the preference of each species when developing a pest management strategy.
Desmin‐related myopathy with mallory body–like inclusions is caused by mutations of the selenoprotein N gene

Desmin‐related myopathies (DRMs) are a heterogeneous group of muscle disorders, morphologically defined by intrasarcoplasmic aggregates of desmin. Mutations in the desmin and the α‐B crystallin genes account for approximately one third of the DRM cases. The genetic basis of the other forms remain unknown, including the early‐onset, recessive form with Mallory body–like inclusions (MB‐DRMs), first described in five related German patients. Recently, we identified the selenoprotein N gene (SEPN1) as responsible for SEPN‐related myopathy (SEPN‐RM), a unique early‐onset myopathy formerly divided in two different nosological categories: rigid spine muscular dystrophy and the severe form of classical multiminicore disease. The finding of Mallory body–like inclusions in two cases of genetically documented SEPN‐RM led us to suspect a relationship between MB‐DRM and SEPN1. In the original MB‐DRM German family, we demonstrated a linkage of the disease to the SEPN1 locus (1p36), and subsequently a homozygous SEPN1 deletion (del 92 nucleotide −19/+73) in the affected patients. A comparative reevaluation showed that MB‐DRM and SEPN‐RM share identical clinical features. Therefore, we propose that MB‐DRM should be categorized as SEPN‐RM. These findings substantiate the molecular heterogeneity of DRM, expand the morphological spectrum of SEPN‐RM, and implicate a necessary reassessment of the nosological boundaries in early‐onset myopathies. Ann Neurol 2004