Miracle-dz/UniFAR-FTUs huggingface dataset:
Quantitative Analysis of the Ellipsoid Zone Intensity in Phenotypic Variations of Intermediate Age-Related Macular Degeneration.

Purpose Reduction of the ellipsoid zone (EZ) intensity has been reported in eyes with age-related macular degeneration (AMD). This study determined whether overall EZ intensity, in retinal locations undisturbed by pathologic features, is associated with the presence of clinical features, which are known important phenotypic risk factors for disease progression, large drusen, reticular pseudodrusen (RPD), and pigmentary abnormalities. Methods A horizontal B-scan through the foveola on spectral-domain optical coherence tomography (SD-OCT) was performed in both eyes of 75 participants with bilateral intermediate AMD and 10 age-similar control participants. Eyes with AMD were classified as per the presence of large drusen, RPD, and hyperpigmentary changes. The relative EZ intensity profile, up to an eccentricity of 3400 μm, was averaged over seven 1000-μm retinal segments. The association between relative EZ intensity profile over seven retinal segments and AMD pathologic features was analyzed. Results The average relative EZ intensities were significantly reduced in eyes with intermediate AMD compared to normal eyes (P ≤ 0.025) and with increasing age (P ≤ 0.020). On multivariate analyses, only the presence of hyperpigmentary changes and increasing age were significantly associated with reduced overall relative intensities (P ≤ 0.024), but not the presence of large drusen or RPD (P ≥ 0.115). Conclusions The presence of hyperpigmentary change in the macula in association with large drusen, not large drusen alone, nor large drusen with RPD, was significantly associated with a generalised reduction in EZ intensity. Quantitative assessment of the relative EZ intensity may serve as an effective biomarker of disease severity and progression.
Microencapsulation of Leydig cells: a system for testosterone supplementation.

The use of testosterone supplementation for elderly men has increased markedly over the last decade due to a recognized gradual decline in serum testosterone, which may lead to decreased bone mass, muscle strength, and libido. Testosterone supplementation is also used widely to treat some forms of erectile dysfunction, androgen deficiency, and infertility. However, long-term exogenous testosterone therapy has been associated with several complications, such as fluid retention, nitrogen retention, and hypertension. Due to these problems, alternate treatment modalities, involving more physiological and longer-acting systems for androgen delivery, have been pursued. Alginate-poly-L-lysine-encapsulated Leydig cell microspheres were used as a novel method for the delivery of testosterone in vivo. Encapsulated Leydig cells, which were stimulated with human chorionic gonadotropin, secreted high levels of testosterone in culture. Unencapsulated cells injected i.p. or s.c. failed to produce any testosterone levels, even with human chorionic gonadotropin stimulation. Castrated rats that were administered encapsulated Leydig cells i.p. or s.c. maintained a serum testosterone level between 0.23 and 0.51 ng/ml. Similar levels of testosterone were obtained for 43 d when the encapsulated Leydig cells were injected s.c. (0.28-0.48 ng/ml). Approximately 10% of a normal adult rat Leydig cell population was injected into each castrated animal; however, this resulted in serum testosterone levels of up to 40% of normal. Clinically, testosterone is usually delivered for supplementation and not for full replacement therapy. Therefore, the findings of this study suggest that microencapsulated Leydig cells may be a viable option as a therapeutic modality involving testosterone supplementation.
RMV Antenna Selection Algorithm for Massive MIMO

Massive multiple-input multiple-output (MIMO) has shown its great capabilities in improving spectral efficiency and energy efficiency, yet the high complexity and cost of hardware are huge challenges. In massive MIMO, antenna selection (AS) is still an effective way to decrease the number of radio frequency chains. In this letter, the AS problem in massive MIMO systems is studied with the consideration of maximizing the channel capacity. To eliminate the limitation of the traditional square maximum-volume (SMV) AS method, the theory of rectangular maximum-volume (RMV) submatrices is introduced. An AS algorithm based on RMV method is also developed for massive MIMO, which can be regarded as a postprocessing of the results of SMV method. Based on the result obtained from SMV method, the proposed algorithm can select a rectangular submatrix with maximum-volume from the channel matrix. Finally, the numerical simulations are presented to show the validity of the proposed RMV method.
A GAP WITH A DEFICIT OF LARGE GRAINS IN THE PROTOPLANETARY DISK AROUND TW Hya

We report ∼3 au resolution imaging observations of the protoplanetary disk around TW Hya at 145 and 233 GHz with the Atacama Large Millimeter/submillimeter Array. Our observations revealed two deep gaps (∼25%–50%) at 22 and 37 au and shallower gaps (a few percent) at 6, 28, and 44 au, as recently reported by Andrews et al. The central hole with a radius of ∼3 au was also marginally resolved. The most remarkable finding is that the spectral index between bands 4 and 6 peaks at the 22 au gap. The derived power-law index of the dust opacity is ∼1.7 at the 22 au gap and decreases toward the disk center to ∼0. The most prominent gap at 22 au could be caused by the gravitational interaction between the disk and an unseen planet with a mass of ≲1.5 MNeptune, although other origins may be possible. The planet-induced gap is supported by the fact that is enhanced at the 22 au gap, indicating a deficit of ∼millimeter-sized grains within the gap due to dust filtration by a planet.
Finding the experts in the crowd: Validity and reliability of crowdsourced measures of children’s gradient speech contrasts

ABSTRACT Perceptual ratings aggregated across multiple nonexpert listeners can be used to measure covert contrast in child speech. Online crowdsourcing provides access to a large pool of raters, but for practical purposes, researchers may wish to use smaller samples. The ratings obtained from these smaller samples may not maintain the high levels of validity seen in larger samples. This study aims to measure the validity and reliability of crowdsourced continuous ratings of child speech, obtained through Visual Analog Scaling, and to identify ways to improve these measurements. We first assess overall validity and interrater reliability for measurements obtained from a large set of raters. Second, we investigate two rater-level measures of quality, individual validity and intrarater reliability, and examine the relationship between them. Third, we show that these estimates may be used to establish guidelines for the inclusion of raters, thus impacting the quality of results obtained when smaller samples are used.
A new half-cycle phasor estimation algorithm

Phasor estimation algorithms for protective relaying are required to filter out unwanted components from the input signals and retain only the components of interest. The components to be removed include harmonics and the decaying-exponential transient (dc offset) component. They affect the accuracy and the speed of convergence of the phasor estimation algorithms to a great extent. This paper presents a new technique, which effectively removes the harmonics and the decaying dc component present in the input signals, within half a cycle of the power system frequency. This is achieved by means of a simple computational procedure using three off-line look-up tables. The proposed algorithm has been tested for a wide variety of signals to assess its performance. The performance is also compared with the two most popular half-cycle phasor estimation algorithms; the half-cycle least error squares algorithms and the mimic plus half-cycle Fourier algorithm. The test results show that the proposed relaying algorithm has a faster convergence and better accuracy compared to these previously proposed algorithms. The results also indicate that the proposed algorithm converges to its final value within half a cycle of the power system frequency as compared to the other two algorithms, which take more than half a cycle to converge, when a decaying dc component is present in the input.
Object Relations and Emotional Processing Deficits Among Psychiatric Outpatients

The aim of this study was to investigate the association between object relations and emotional processing deficits among a general sample of psychiatric outpatients. The sample consisted of 104 patients consecutively referred to 2 outpatient clinics. Participants completed measures of object relations, emotional processing deficits, and general psychiatric distress. After controlling for the effect of current symptom distress, we found that object relations impairment was significantly associated with emotional processing deficits relating to unregulated emotions, signs of unprocessed emotions, and emotion suppression. These findings support the notion that patients with impoverished mental structures possess maladaptive strategies for modulating intense affects.
Sexual reproductive biology of a colonial rotifer Sinantherina socialis (Rotifera: Monogononta): do mating strategies vary between colonial and solitary rotifer species?

In many aquatic invertebrates including monogonont rotifers, sex provides genetic variation and dormant stages that allow for dispersal in time and space. While the reproductive biology of some solitary monogonont rotifer species is known, little is known concerning mating behaviors in colonial rotifers. Coloniality poses unique challenges to the typical mating behavior of solitary rotifers. For instance, most species engage in circling behavior, where the male swims in close proximity to the female. In colonial forms, access to a particular female may be hindered by nearby colony mates. Here, we provide descriptions of (1) male morphology, (2) mating behavior, and (3) types of eggs of the widespread colonial rotifer Sinantherina socialis, and discuss modifications in mating strategies as a consequence of coloniality. Two important differences from mating patterns documented in solitary rotifers were found in S. socialis. First, duration of circling phase of mating is protracted for males encountering small colonies of females as compared to solitary females. Males encountering single females removed from their colonies behave similarly to those of solitary species. Second, duration of copulation in S. socialis is the shortest reported for any rotifer species. Endogamy might occur in this species as sons copulate with their sisters and mothers, at least under laboratory conditions. Examples of behaviors are available in linked video clips.
Surface-based Comparisons of Macaque and Human Cortical Organization In : From Monkey Brain to Human Brain

Introduction In his pioneering architectonic studies of primate cerebral cortex, Brodmann (1905, 1909) described a rich mosaic of anatomically distinct cortical areas in both humans and monkeys. He identified 28 neocortical areas in the Old World monkey and 46 in human, and he used corresponding terminology for most of these areas on the supposition that the similarities in architecture reflected evolutionary homologies. Subsequent studies leave little doubt that the primary sensory and motor areas and their immediate neighbors are indeed homologous in monkeys and humans. On the other hand, the evolutionary relationships are much less clear for most of the remaining expanse of neocortex, mainly because Brodmann’s partitioning schemes for both species have been subject to extensive revision over the ensuing century. These revisions are based on many different lines of experimental evidence and are very much a work in progress; consensus has yet to be reached regarding the basic arrangement of cortical areas over most of neocortex in either species. Depending on the criteria used for identifying areas (itself a contentious issue), the total number of cortical areas may approach or exceed 100 areas in the macaque and an even larger number in humans, i.e., double or triple the number enumerated by Brodmann (Van Essen, 2003).
Dietary factors and biomarkers involved in the methylenetetrahydrofolate reductase genotype-colorectal adenoma pathway.

BACKGROUND & AIMS Methylenetetrahydrofolate reductase (MTHFR) is involved in intracellular folate homeostasis and metabolism. We assessed 2 polymorphisms in the MTHFR gene (C677T and A1298C) in relation to colorectal adenoma recurrence and conducted analyses to investigate their joint effects with plasma and dietary markers of folate status. METHODS We prospectively analyzed data from 1598 individuals genotyped for the C677T polymorphism and 1583 with data on A1298C. RESULTS Among nonusers of multivitamin supplements, compared with wild-type carriage, higher odds of recurrence were observed for those with the 677 TT variant (odds ratio [OR], 1.66; 95% confidence interval [CI], 1.04-2.63) and a nonsignificant increase was observed among those with the 1298 CC variant (OR, 1.50; 95% CI, 0.93-2.40). Diplotype analyses among nonusers of multivitamins showed that individuals who carry the MTHFR 677TT_1298AA or 677CC_1298CC combination were significantly more likely to have a recurrence compared with those with the double wild-type (OR, 2.05 for TT_AA and 1.85 for CC_CC). Higher odds of recurrence were observed among participants with low folate intake or plasma folate and the 677 TT or 1298 CC variants compared with those with lower levels and the wild-type or heterozygous genotypes. Stronger associations were shown for the combination of high homocysteine and the 677 TT variant (OR, 2.29; 95% CI, 1.00-5.26) but not the 1298 CC variant (OR, 1.09; 95% CI, 0.39-3.01). CONCLUSIONS We propose that the effect of the MTHFR genotypes on increasing risk of adenoma recurrence in the presence of a low folate status is through their increase in homocysteine concentrations, which in turn could result in DNA hypomethylation via pathways involving S-adenosylhomocysteine.
Aqueous infusions of mediterranean herbs exhibit antioxidant activity towards iron promoted oxidation of phospholipids, linoleic acid, and deoxyribose

Reactive oxygen species (ROS) have been widely known to inflict biological damage upon a variety of biological sites. The ability to counteract any such activity has been the subject of this work, in an attempt to comprehend prooxidant metal ion induced oxidation and its possible physiological consequences. Five Mediterranean aqueous herb infusions have been employed in the investigation of possible pro/antioxidant activity promoted by prooxidant iron ions. In the presence of phospholipid liposomes or linoleic acid micelles or 2-deoxy-d-ribose, it was shown that all of the aqueous infusions used exhibited antioxidant activity in comparison to the iron control. The antioxidant activity, studied on 2-deoxy-d-ribose, at three concentration levels in each herb, appears to be dose dependent, albeit non-linear. The total polyphenol content of the investigated herb infusions, however, does not directly correlate with the observed antioxidant activity. The variable, yet effective, antioxidant capacity of the aqueous infusions indicates that their antioxidant components can quench ROS generating activity, brought on different substrates and likely arisen by variable mechanisms involving different ROS.
Increased Dosage of DYRK1A and Brain Volumetric Alterations in a YAC Model of Partial Trisomy 21

A yeast artificial chromosome (YAC) transgenic murine model of partial trisomy 21 overexpressing five human genes—including DYRK1A, which encodes a serine threonine kinase involved in cell cycle control—has been shown to present an increase in brain weight. We analyzed this new phenotype by measuring total and regional brain volumes at different ages, using a 7 Tesla magnetic resonance imaging volumetric approach. Volumetric measurements showed a total volume increase of 13.6% in adult mice. Changes in brain morphogenesis were already visible at a very early postnatal stage (postnatal days 2–7). Region‐specific changes were characterized from postnatal day 15 to 5 months. These results, made it possible to define region‐specific effects of DYRK1A overexpression, with the strongest increase seen in the thalamus–hypothalamus area (24%). Anat Rec, 291:254–262, 2008. © 2008 Wiley‐Liss, Inc.
Synthesis of alkoxy-substituted diaryl compounds and correlation of ring separation with inhibition of tubulin polymerization: differential enhancement of inhibitory effects under suboptimal polymerization reaction conditions.

A number of cytostatic compounds (2-4, 7, and 8), which can be described as "diaryl", inhibit tubulin polymerization, cause cells to accumulate in mitotic arrest, and competitively inhibit the binding of colchicine to tubulin. They differ, however, in the separation of the two aryl moieties. To attempt to understand this variability we prepared a series of analogues modeled on 3 and 4 ("benzodioxole series") and on 7 and 8 ("combretastatin series") which differed only in the number of methylene units (ranging from none to four) separating the aryl moieties. These compounds were evaluated for their effects on tubulin polymerization, colchicine binding, and the growth of L1210 murine leukemia cells. In terms of inhibitory effects on tubulin polymerization, for the combretastatin series there was an optimal separation of the two phenyl rings by a two-carbon bridge (compound 24), with progressively decreasing inhibitory activity when the separation was by one carbon (20), three carbons (25), or four carbons (28) (the biphenyl analogue 16 was inactive). The benzodioxole series, however, did not permit us to generalize this finding, because the least active agents prepared (39 and 40) had a two-carbon bridge, while those with one- (5 and 6) and three-carbon (46 and 47) bridges were nearly equivalent in potency. Submicromolar IC50 values for inhibition of L1210 cell growth were only obtained for compounds 20 (IC50, 0.2 microM), 24 (0.07 microM), and 25 (0.4 microM). While evaluating the effects of these agents on tubulin polymerization, we noted with the combretastatin series and with several standard agents that apparent potency (in terms of IC50 values) was always lower if the reaction was performed at 30 degrees C, with 0.25 mM MgCl2, than at 37 degrees C, with 1.0 mM MgCl2. This enhancement of IC50 values in the former system as compared with the latter was particularly dramatic for the less active agents (e.g., 28) as compared with the more active (e.g. 24).
Chewing-side Preference is Involved in Differential Cortical Activation Patterns during Tongue Movements after Bilateral Gum-chewing: a Functional Magnetic Resonance Imaging Study

Contralateral dominance in the activation of the primary sensorimotor cortex (S1/M1) during tongue movements (TMs) has been shown to be associated with a chewing-side preference (CSP). However, little is known about its interaction with chewing-related cortical activation. Functional magnetic resonance imaging was performed before and after gum-chewing in six subjects who exhibited a left CSP to determine the relationship between the CSP and activation patterns in the S1/M1 during TMs. Before the subjects chewed the gum, activation foci were found in the bilateral S1/M1. In the left hemisphere, both signal intensity and the area of activation significantly increased during TMs within 10 min after subjects chewed gum. Moreover, this augmented activation significantly decreased within 20 min during tongue protrusion and leftward movement. In the right hemisphere, there were no marked changes during TMs. These results suggest that bilateral gum-chewing enhances activation of the S1/M1 ipsilateral to the CSP during TMs.
Structural characterization of the interactions of optimized product inhibitors with the N-terminal proteinase domain of the hepatitis C virus (HCV) NS3 protein by NMR and modelling studies.

The interactions of peptide inhibitors, obtained by the optimization of N-terminal cleavage products of natural substrates, with the protease of human hepatitis C virus (HCV) are characterized by NMR and modelling studies. The S-binding region of the enzyme and the bound conformation of the ligands are experimentally determined. The NMR data are then used as the experimental basis for modelling studies of the structure of the complex. The S-binding region involves the loop connecting strands E2 and F2, and appears shallow and solvent-exposed. The ligand binds in an extended conformation, forming an antiparallel beta-sheet with strand E2 of the protein, with the P1 carboxylate group in the oxyanion hole.
Association of socioeconomic status with consumption of cigarettes, illicit drugs, and alcohol

ABSTRACT Introduction and Aims: Socioeconomic Status (SES) is considered as one of the important factors associated with use of various drugs. The present study aimed to investigate the effect of SES on cigarette smoking, alcohol use, drug use, and passive exposure to opium and cigarette smoke. Design and Methods: In this study, which is part of a multicenter case-control study, the research hypothesis was checked among controls who had referred to hospitals. Data were collected through a questionnaire and laboratory tests to determine the actual consumers of opium and other illicit drugs. Then, the data were analyzed using STATA 13. Result: This study was performed on 364 individuals within the age range of 30 to 75 years. More than 55% of the participants had a history of life-time consumption of cigarettes and hookah as well as alcohol and drugs. The results revealed an inverse relationship between SES and life-time consumption of hookah and alcohol. Furthermore, individuals with higher SES were more likely to deny their drug use. Discussion and Conclusions: The results revealed little robust evidence supporting the assumption that SES level can have an important effect on illicit drug use. On the other hand, the participants’ characteristics could have a prominent effect on precise evaluation of the relationship between SES and drug use. Further multicenter studies are needed with samples diversified in terms of age and ethnicity to identify these confounding relationships.