Miracle-dz/UniFAR-FTUs huggingface dataset:
Bovine cells expressing bovine herpesvirus 1 (BHV-1) glycoprotein IV resist infection by BHV-1, herpes simplex virus, and pseudorabies virus

We expressed the bovine herpesvirus 1 (BHV-1) glycoprotein IV (gIV) in bovine cells. The protein expressed was identical in molecular mass and antigenic reactivity to the native gIV protein but was localized in the cytoplasm. Expressing cells were partially resistant to BHV-1, herpes simplex virus, and pseudorabies virus, as shown by a 10- to 1,000-fold-lower number of plaques forming on these cells than on control cells. The level of resistance depended on the level of gIV expression and the type and amount of challenge virus. These data are consistent with previous reports by others that cellular expression of the BHV-1 gIV homologs, herpes simplex virus glycoprotein D, and pseudorabies virus glycoprotein gp50 provide partial resistance against infection with these viruses. We have extended these findings by showing that once BHV-1 enters gIV-expressing cells, it replicates and spreads normally, as shown by the normal size of BHV-1 plaques and the delayed but vigorous synthesis of viral proteins. Our data are consistent with the binding of BHV-1 gIV to a cellular receptor required for initial penetration by all three herpesviruses and interference with the function of that receptor molecule.
Radiochemotherapy versus Radiochemotherapy plus Surgery in Stage IIB Cervical Cancer. A Phase III Single Institution Randomized Trial

Journal of Radiotheraphy & Medical Oncology December 2014 Vol.20 No 2: 47-53 Address for correspondence: Patricia Şuteu Prof. Dr. Ion Chiricuţă Oncology Institute Str. Republicii nr. 34-36 400015 Cluj-Napoca, Romania Email: patricia.suteu@gmail.com Background: In the Prof. Dr. Ion Chiricuţă Oncology Institute, treatment of stage IIB cervical cancer usually comprises surgery after radiochemotherapy (RCT). Aim: To compare the overall survival (OS), disease-free survival (DFS) and treatment failures after exclusive RCT versus RCT+surgery in patients with stage IIB cervical cancer included in a phase IIb single institution randomized trial. Material and methods: During September 2006November 2010, 111 patients with histologically confirmed cervical cancer stage IIB were randomly assigned in 2 arms: 59 in arm A with RCT+surgery and 52 in arm B with exclusive RCT. Treatment failure was defined as local recurrence, lymph node metastasis (lombo-aortic, supraclavicular) or organ metastasis. Results: The median age was 47 years and the median follow-up was 66.3 months. Eleven patients (9.9%) died: 6 (10.16%) in arm A, 5 (9.61%) in arm B; 2 deaths were not cervical-cancer related. The 5-year OS was 92% in arm A and 89% in arm B (p=0.6). The 5-year DFS rates were 88% in arm B and 89% in arm A (p=0.76). There were 12 (11%) treatment failures: 6 (10.16%) in arm A and 6 (11.53%) in arm B (p=0.82). Local recurrence was observed in 4 (7.69%) cases in arm B and one (1.69%) case in arm A. Distant metastases occurred in 5 patients (8.47%) in arm A and 2 (3.84%) in arm B. Conclusions: Despite a higher local recurrence rate in patients without surgery, there are no statistically significant differences between the two treatment modalities, regarding OS, DFS and treatment failure.
Mobile game-based learning in secondary education: engagement, motivation and learning in a mobile city game

Using mobile games in education combines situated and active learning with fun in a potentially excellent manner. The effects of a mobile city game called Frequency 1550, which was developed by The Waag Society to help pupils in their first year of secondary education playfully acquire historical knowledge of medieval Amsterdam, were investigated in terms of pupil engagement in the game, historical knowledge, and motivation for History in general and the topic of the Middle Ages in particular. A quasi-experimental design was used with 458 pupils from 20 classes from five schools. The pupils in 10 of the classes played the mobile history game whereas the pupils in the other 10 classes received a regular, project-based lesson series. The results showed those pupils who played the game to be engaged and to gain significantly more knowledge about medieval Amsterdam than those pupils who received regular project-based instruction. No significant differences were found between the two groups with respect to motivation for History or the Middle Ages. The impact of location-based technology and game-based learning on pupil knowledge and motivation are discussed along with suggestions for future research.
L'indépendance du commissaire aux comptes : cadre conceptuel et analyse empirique

Le commissaire aux comptes est le garant vis-a-vis des tiers de la qualite de l'information comptable et financiere produite par l'entreprise sous la responsabilite des dirigeants. Pour garder sa credibilite vis-a-vis des tiers, le commissaire aux comptes a l'obligation d'etre et de paraitre independant. L independance est definie comme la capacite de l'auditeur a resister aux pressions de toute nature pour prendre des decisions en conformite avec la loi comptable. La recherche contribue a presenter dans un premier cadre conceptuel les facteurs susceptibles d'avoir une incidence sur l'independance percue du commissaire aux comptes par les utilisateurs de l'information financiere. Les differents facteurs etudies concernent l'auditeur, le cabinet d'audit et l'environnement. Dans un deuxieme cadre conceptuel, les facteurs susceptibles d'avoir une influence sur le comportement de l'auditeur face a une situation de mise en cause de son independance ont ete etudies. Les variables sont de nature individuelle (le stade de developpement moral cognitif, le "locus of control" et la croyance dans un monde juste) et organisationnelles (culture du cabinet d'audit, mise en place de procedures internes, qualite de la communication au sein de l'equipe d'audit).
Extended-release tramadol (tramadol ER) in the treatment of chronic low back pain.

BACKGROUND This study evaluated the safety and efficacy of tramadol ER 300 mg and 200 mg versus placebo once daily in the treatment of chronic low back pain, using an open-label run-in followed by, without washout, a randomized controlled study design. METHODS Adults with scores > or = 40 on a pain intensity visual analog scale (VAS; 0 = no pain; 100 = extreme pain) received open-label tramadol ER, initiated at 100 mg once daily and titrated to 300 mg once daily during a three-week open-label run-in. Patients completing run-in were randomized to receive tramadol ER 300 mg, 200 mg, or placebo once daily for 12 weeks. RESULTS Of 619 patients enrolled, 233 (38 percent) withdrew from the run-in, primarily because of adverse event (n = 128) or lack of efficacy (n = 41). A total of 386 patients were then randomized to receive either 300 mg (n = 128), 200 mg (n = 129), or placebo (n = 129). Following randomization, mean scores for pain intensity VAS since the previous visit, averaged over the 12-week study period, increased more in the placebo group (12.2 mm) than in the tramadol ER 300-mg (5.2 mm, p = 0.009) and 200-mg (7.8 mm, p = 0.052) groups. Secondary efficacy scores for current pain intensity VAS, patient global assessment, Roland Disability Index, and overall sleep quality improved significantly (p < or = 0.029 each) in the tramadol ER groups compared with placebo. The most common adverse events during the double-blind period were nausea, constipation, headache, dizziness, insomnia, and diarrhea. CONCLUSIONS In patients who tolerated and obtained pain relief from tramadol ER, continuation of tramadol ER treatment for 12 weeks maintained pain relief more effectively than placebo. Adverse events were similar to those previously reported for tramadol ER.
Financing Multiple Heterogeneous Suppliers in Assembly Systems: Buyer Finance vs. Bank Finance

Buyer finance has been practiced by manufacturers/assemblers for years; however, few papers have investigated the efficacy of buyer finance in an assembly system with multiple suppliers. This paper fills the literature gap by comparing buyer finance with bank finance in a supply chain with one assembler and multiple heterogeneous capital-constrained component suppliers. We characterize the equilibrium solutions for different financing schemes (i.e., buyer finance, bank finance, and no finance). We show that in buyer finance the assembler should charge the suppliers the lowest possible interest rate, which may be even below its own unit capital opportunity cost, leading to interest losses in financing suppliers. However, the assembler can benefit more from enhanced inventory backup and lower component purchasing prices resulting from the low buyer-finance interest rate. We further compare the two financing schemes from the perspectives of the assembler, the borrowing and nonborrowing suppliers, and the who.
Weight Growth Velocity and Postnatal Growth Failure in Infants 501 to 1500 Grams: 2000–2013

BACKGROUND: Very low birth weight infants often gain weight poorly and demonstrate growth failure during the initial hospitalization. Although many of the major morbidities experienced by these infants during their initial NICU stays have decreased in recent years, it is unclear whether growth has improved. METHODS: We studied 362 833 infants weighing 501 to 1500 g without major birth defects born from 2000 to 2013 and who were hospitalized for 15 to 175 days at 736 North American hospitals in the Vermont Oxford Network. Average growth velocity (GV; g/kg per day) was computed by using a 2-point exponential model on the basis of birth weight and discharge weight. Postnatal growth failure and severe postnatal growth failure were defined as a discharge weight less than the 10th and third percentiles for postmenstrual age, respectively. RESULTS: From 2000 to 2013, average GV increased from 11.8 to 12.9 g/kg per day. Postnatal growth failure decreased from 64.5% to 50.3% and severe postnatal growth failure from 39.8% to 27.5%. The interquartile ranges for the hospitals participating in 2013 were as follows: GV, 12.3 to 13.4 g/kg per day; postnatal growth failure, 41.1% to 61.7%; and severe postnatal growth failure, 19.4% to 36.0%. Adjusted and unadjusted estimates were nearly identical. CONCLUSIONS: For infants weighing 501 to 1500 g at birth, average GV increased and the percentage with postnatal growth failure decreased. However, in 2013, half of these infants still demonstrated postnatal growth failure and one-quarter demonstrated severe postnatal growth failure.
Interval cancers after negative colonoscopy: population-based case-control study

Objective The risk of colorectal cancer after a previous negative colonoscopy is very low. Nevertheless, interval cancers occur. We aimed to assess the characteristics and predictors of interval cancers after negative colonoscopy. Methods A population-based case-control study was conducted in Southern Germany in 2003–7. Sociodemographic and tumour characteristics were compared among 78 patients with interval cancers occurring 1–10 years after a negative colonoscopy and 433 colorectal cancers detected at screening. In addition, the indication for the preceding negative colonoscopy and its completeness were compared between patients with interval cancers and 515 controls with a preceding negative colonoscopy. Results 56.4% of interval cancers occurred among women compared with 33.7% of cases detected by screening (p=0.0001). After adjustment for covariates, female sex (OR 2.28, 95% CI 1.35 to 3.83) and location in the caecum or ascending colon (OR 1.98, 95% CI 1.17 to 3.35) were independently associated with occurrence of interval cancers. The preceding negative colonoscopy was more commonly conducted because of a positive faecal occult blood test (26.0% vs 12.9%, p=0.009) and was more often incomplete (caecum not reached: 18.1% vs 6.7%, p=0.001) among interval cancer cases than among controls. Characteristics of the preceding negative colonoscopy strongly and independently associated with occurrence of interval cancers were follow-up of a positive faecal occult blood test among men (OR 5.49, 95% CI 2.10 to 14.35) and incompleteness among women (OR 4.38, 95% CI 1.69 to 11.30). Conclusions The observed patterns suggest that a substantial proportion of interval cancers are due to neoplasms missed at colonoscopy and are potentially preventable by enhanced performance of colonoscopy.
Provenance and age of bacteria-like structures on mid-Palaeozoic plant fossils

Structures, termed microbioids, comforming to bacteria in size and shape (e.g. rods, spheres, chains and clusters of spheres) have been observed by field emission scanning electron microscopy (FE-SEM) on coalified Silurian and Lower Devonian spores, sporangia, cuticles and coprolites. Some were sectioned for transmission electron microscopy. The elemental composition of both microbioids and ‘substrates’ was investigated using a X-ray microanalysis system. These analyses combined with comparative studies on recent bacteria and cyanobacteria were undertaken to evaluate the biogenicity, nature and age of the microbioids. Spheres with a Si signature (0.03–0.5 μm diameter) and assumed composed of silica are interpreted as artefacts produced abiotically during the extraction procedures. A similar origin is proposed for hollow spheres that are composed of CaF2. These occur singly, in short chains simulating filaments, and in clusters. Considerable differences in size (0.2–2.0 μm diameter) and appearance relate to local variation in the chemical environment during extraction. Spheres (0.2–1.5 μm diameter), that lack a mineral signature, with a framboidal surface ornament and occur within sporangia are identified as by-products of spore development. A biotic origin is also postulated for C-containing rod-shaped structures (>3.1 μm long, <1.4 μm wide), some with collapsed surfaces, although comparisons with living bacteria indicate recent contamination. More elongate rod-shaped microbioids (<8.6 μm long, 1.2 μm wide) have been identified as detrital rutile crystals (TiO2). Minute naviculate structures (<2.2 μm long) resembling diatoms are of unknown origin but are probably composed of thorium hydroxide. Unmineralized filaments of cyanobacterial morphology are recent contaminants. Some of the sporangia and spore masses are partially covered by associations of fragmented sheets, interconnecting strands, rods and spheres that are interpreted as dehydrated biofilms. Being unmineralized they are probably also of recent origin, although they might have survived wild-fire along with the charcoalified mesofossils. Many of the structures illustrated here were initially identified casually as bacteria on the small fossils extracted for biodiversity studies using well-tried, conventional, palaeobotanical techniques. Our subsequent more detailed analyses have shown how such processes can produce artefacts that are morphological analogues of mineralized bacteria, leave residues that mimic bacterial shapes and, despite some efforts such as storage in dilute HCl to eliminate living bacteria, introduce contamination. They reinforce previous concerns that verification of the biogenicity and syngenicity of bacterial-like objects in ancient Earth and extra-terrestrial rocks should not only rely on size and morphological look-alikes, but must encompass a thorough understanding of fossilization processes and extraction techniques plus, ideally, other measures of biogenicity (e.g. biomarkers) and syngenicity.
The Association of Delayed Corneal Surface and Visual Recovery After Corneal Transplantation With Longer Donor Storage Time-A Prospective Analysis

PurposeThis study aimed to assess the influence of donor corneal storage time on endothelial cell count (ECC), corneal epithelial recovery, and visual rehabilitation after corneal transplantation in the first postoperative year. DesignA collaborative prospective study involving a local eye bank and a tertiary ophthalmic unit was conducted. MethodsDonor cornea buttons were stored in Optisol-GS (Chiron Ophthalmics Inc, Irvine, Calif) storage media for a maximum of 14 days before transplantation. Before corneal distribution, the eye bank collected information on death-to-harvesting time, death-to-surgery time, donor central corneal thickness, and donor ECC at various time points. Subjects who underwent penetrating keratoplasty and endothelial keratoplasty were recruited and monitored for 1 year. Postoperative epithelial healing, visual acuity, ECC, and hospital stay were evaluated. ResultsThirty-one eyes of 31 patients completed the study. There was a significant positive correlation between donor storage time and epithelial healing (Spearman &rgr; = 0.39, P = 0.031). Faster epithelial healing was significantly correlated with posttransplantation visual improvements at months 1, 3, and 6 and shorter hospital stay (Spearman &rgr; = 0.74, P < 0.001). Mean ECC loss was 23.8% at 12 months posttransplantation. There was no significant correlation between storage time and ECC loss preoperatively and posttransplantation. ConclusionsThe duration of graft storage in Optisol-GS storage media up to 14 days had no significant effects on long-term visual acuity and ECC postoperatively. Shorter storage time had significant correlation with earlier epithelial healing and faster visual rehabilitation.
Basis of phenotypic variability in sporadic Creutzfeldt–Jakob disease

Objective: To determine the correlation of clinical and pathologic features with prion protein (PrP) gene polymorphism at codon 129 and with biochemical characteristics of the protease-resistant PrP (PrPres) in sporadic Creutzfeldt–Jakob disease (CJD). Methods: Clinical data acquisition, determination of the codon 129 genotype of the PrP gene, brain pathologic study, and immunoblot analysis of crude brain extracts were carried out in 14 patients. Results: The first group of 10 subjects showed the classic clinical triad, with dementia, myoclonus, and periodic sharp waves on EEG. None of the subjects had amyloid plaques, but PrP immunoreactivity was of diffuse synaptic type in the cerebellar cortex. All subjects were methionine–methionine at codon 129 and the PrPres had a biochemical profile of type 1 (unglycosylated band of 21.5 kD). A second group of three patients showed cerebellar ataxia and later dementia. Periodic sharp waves on EEG were absent. PrP amyloid plaques predominated in the cerebellar cortex, along with diffuse PrP immunoreactivity. These subjects were valine–valine at codon 129 and had a type 2 PrPres (unglycosylated band of 19.4 kD). In the last patient cerebellar ataxia and dementia appeared simultaneously. Many Kuru-type plaques were present in the cerebellar cortex; many PrP amyloid plaques were present in the basal ganglia. This patient was methionine-valine at codon 129 and the PrPres was of type 1. Conclusions: The codon 129 genotype is only one of the factors determining CJD phenotype, and the biochemical pattern of PrP has no direct correlation with this phenotype.
Cell-type Specific Recognition of RGD- and Non-RGD-containing Cell Binding Domains in Fibrillin-1 (*)

The fibrillins are large glycoprotein components of 10-nm microfibrils found in the extracellular matrix of most tissues. Microfibrils play a role in elastic fiber assembly and serve to link cells to elastic fibers in the extracellular matrix. To determine whether fibrillin-1 specifically interacts with receptors on cells from fibrillin-rich tissues, we evaluated whether two cell types that produce different types of fibrillin can adhere to purified fibrillin-1 in cell adhesion assays. Our results indicate that both cell types attach and spread on fibrillin-1 and that the RGD sequence in the fourth 8-cysteine motif mediates this interaction. Fibroblast attachment to fibrillin-1 was sensitive to inhibition by antibodies to the αvβ3 receptor and by peptides encoding the RGD sequence in fibrillin-1 and the second RGD sequence in fibrillin-2. In contrast, adhesion of auricular chondroblasts to fibrillin-1 was only partially inhibited by these reagents, suggesting that some cell types recognize a second, non-RGD binding site within the fibrillin molecule. These findings confirm and extend ultrastructural studies that suggest a direct interaction between microfibrils and the cell surface and provide a functional explanation for how this association occurs.
Variation in mangrove forest structure and sediment characteristics in Bocas del Toro, Panama

Mangrove forest structure and sediment characteristics were examined in the extensive mangroves of Bocas del Toro, Republic of Panama. Forest structure was characterized to determine if spatial vegetation patterns were repeated over the Bocas del Toro landscape. Using a series of permanent plots and transects we found that the forests of Bocas del Toro were dominated by Rhizophora maugle with very few individuals of Avicennia germinans and Laguncularia racemosa. Despite this low species diversity, there was large variation in forest structure and in edaphic conditions (salinity, concentration of available phosphorus, Eh and sulphide concentration). Aboveground biomass varied 20-fold, from 6.8 Mg ha(-1) in dwarf forests to 194.3 Mg ha(-1) in the forests fringing the land. But variation in forest structure was predictable across the intertidal zone. There was a strong tree height gradient from seaward fringe (mean tree height 3.9 m), decreasing in stature in the interior dwarf forests (mean tree height 0.7 m), and increasing in stature in forests adjacent to the terrestrial forest (mean tree height 4.1 m). The predictable variation in forest structure emerges due to the complex interactions among edaphic and plant factors. Identifying predictable patterns in forest structure will aid in scaling up the ecosystem services provided by mangrove forests in coastal landscapes.
Predictors of treatment failure in multiple drug-resistant falciparum malaria: results from a 42-day follow-up of 224 patients in eastern Thailand.

We report here the results of a 42-day follow-up of 224 patients treated with mefloquine for uncomplicated falciparum malaria in Eastern Thailand. The risk of treatment failure among the 209 patients who completed the follow-up was 57% (95% confidence interval [CI] = 50,64). The daily risk of treatment failure, estimated through an exponential survival function, was constant during the follow-up period and equal to 1.9%. Five patient characteristics were found to be independent and important predictors of treatment failure in a Cox proportional hazards model: a young age (adjusted hazard ratio [AHR] for an increase of 10 years of age = 0.75 [95% CI = 0.62, 0.90]); a history of at least three documented mefloquine treatments in the past year (AHR = 1.89 [95% CI = 1.10, 3.24]); a parasitemia count > 100,000/microliter (AHR = 1.80 [95% CI = 1.16, 2.80]); and a history of diarrhea in the first two days after treatment (AHR = 1.51 [95% CI = 0.99, 2.31]). A hemoglobin level < or = 10 g/dl on the day of consultation was also a predictor of treatment failure, but only among patients who had been treated for malaria in the past 120 days (AHR = 4.38 [95% CI = 1.55, 12.1]). These latter patients may have become anemic while they were unsuccessfully treated with mefloquine for an infection by a multiple drug-resistant strain in the past 120 days. (ABSTRACT TRUNCATED AT 250 WORDS)