Miracle-dz/UniFAR-FTUs huggingface dataset:
How optimal life history changes with the community size-spectrum

This paper derives optimal life histories for fishes or other animals in relation to the size spectrum of the ecological community in which they are both predators and prey. Assuming log-linear size-spectra and well known scaling laws for feeding and mortality, we first construct the energetics of the individual. From these we find, using dynamic programming, the optimal allocation of energy between growth and reproduction as well as the trade-off between offspring size and numbers. Optimal strategies were found to be strongly dependent on size spectrum slope. For steep size spectra (numbers declining rapidly with size), determinate growth was optimal and allocation to somatic growth increased rapidly with increasing slope. However, restricting reproduction to a fixed mating season changed optimal allocations to give indeterminate growth approximating a von Bertalanffy trajectory. The optimal offspring size was as small as possible given other restrictions such as newborn starvation mortality. For shallow size spectra, finite optimal maturity size required a decline in fitness for large size or age. All the results are compared with observed size spectra of fish communities to show their consistency and relevance.
Cheek tooth morphology and ancient mitochondrial DNA of late Pleistocene horses from the western interior of North America: Implications for the taxonomy of North American Late Pleistocene Equus

Horses were a dominant component of North American Pleistocene land mammal communities and their remains are well represented in the fossil record. Despite the abundant material available for study, there is still considerable disagreement over the number of species of Equus that inhabited the different regions of the continent and on their taxonomic nomenclature. In this study, we investigated cheek tooth morphology and ancient mtDNA of late Pleistocene Equus specimens from the Western Interior of North America, with the objective of clarifying the species that lived in this region prior to the end-Pleistocene extinction. Based on the morphological and molecular data analyzed, a caballine (Equus ferus) and a non-caballine (E. conversidens) species were identified from different localities across most of the Western Interior. A second non-caballine species (E. cedralensis) was recognized from southern localities based exclusively on the morphological analyses of the cheek teeth. Notably the separation into caballine and non-caballine species was observed in the Bayesian phylogenetic analysis of ancient mtDNA as well as in the geometric morphometric analyses of the upper and lower premolars. Teeth morphologically identified as E. conversidens that yielded ancient mtDNA fall within the New World stilt-legged clade recognized in previous studies and this is the name we apply to this group. Geographic variation in morphology in the caballine species is indicated by statistically different occlusal enamel patterns in the specimens from Bluefish Caves, Yukon Territory, relative to the specimens from the other geographic regions. Whether this represents ecomorphological variation and/or a certain degree of geographic and genetic isolation of these Arctic populations requires further study.
Language Development in Deaf Infants Following Cochlear Implantation

Objective—To evaluate the benefits of cochlear implantation in infancy and compare them to those obtained in children implanted at a slightly older age.Material and Methods—Using standard language measurement tools, including the Grammatical Analysis of Elicited Language—Presentence Level (GAEL-P) and the Reynell Developmental Language Scales, progress was documented in a child who received a cochlear implant in infancy and compared to that achieved in children implanted at older ages. A new measurement tool, the Visual Habituation Procedure, was used to document early skills and the results were compared to those obtained in normal-hearing infants.Results—By the age of 2 years the subject implanted in infancy achieved scores on the GAEL-P which were nearly equivalent to those achieved at the age of 51/2 years by children implanted at later ages. Age-equivalent scores on the Reynell Developmental Language Scales were achieved by the subject implanted in infancy and the ability to discriminate speech patterns was demonstrated using the Visual Habituation Procedure.Conclusion—This report demonstrates enhanced language development in an infant who received a cochlear implant at the age of 6 months.
Effects of chronic nanoparticulate silver exposure to adult and juvenile sheepshead minnows (Cyprinodon variegatus)

The use of nanoparticulate silver (AgNP) is increasingly widespread and recently has been shown to have a plausible release route into aquatic environments. To date, relatively little research has examined the effects of AgNP on estuarine fish. The authors present data indicating that chronic exposure to low levels of AgNP induces significant adverse effects in both juvenile and adult sheepshead minnows (Cyprinodon variegarus; SHMs). Chronic exposure to low levels of AgNP produced significant increases in tissue burdens in both juvenile and adult SHMs, resulting in significant thickening of epithelia gill tissue and in dramatically altered gene expression profiles. The results do not appear to be attributable to the release of silver ions through particle dissolution. The alteration in gene expression was greatest in adult gonads, but no evidence of AgNP‐related dysfunction was found at the tissue level. In contrast, the authors found a significant effect on gill morphology, but very little evidence of effect on gill transcription profiles. Environ. Toxicol. Chem. 2012;31:160–167. © 2011 SETAC
Methacholine bronchial responsiveness and variations in lung function among workers exposed to flour.

OBJECTIVES Methacholine bronchial responsiveness and variations in the pulmonary function of workers exposed to wheat flour and a reference group were compared. METHODS Each subject [140 men exposed to flour (bakers and pastry makers) and 77 controls] completed a standardized questionnaire. Bronchial responsiveness was quantified by measuring the slope between percentage decrements in forced expiratory volume in 1 second (FEV1) and cumulative methacholine dose. FEV1 and peak expiratory flow (PEF) were recorded four times a day for 15 days using a handheld electronic spirometer. The variability in the FEV1 and PEF readings was expressed as variation coefficients (100 x standard deviation/mean). RESULTS The mean duration of exposure to flour was 14 (SD 9) years. Rhinitis was significantly more common in the exposed group than in the control group (30.7% versus 11.7%, P = 0.001). The mean FEV1 and PEF did not significantly differ between the two groups. The slope of the dose-response to methacholine and the variation coefficients were lower among the unexposed nonsmokers than among the exposed workers and smokers. The differences were significant for the exposed smokers. The two variation coefficients correlated with each other (r = 0.82) but not with the slope of the methacholine challenge. Conclusions Occupational exposure to flour and smoking increase bronchial responsiveness, as measured by the slope of the dose-response to methacholine and the variation coefficients of airflow. However, methacholine bronchial responsiveness and the variability of lung function do not measure exactly the same aspect of airway behavior.
Improving water resilience with more perennially based agriculture

ABSTRACT Land conversion from natural to managed ecosystems, while necessary for food production, continues to occur at high rates with significant water impacts. Further, increased rainfall variability exposes agricultural systems to impacts from flood and drought events. In many regions, water limitations are overcome through technological approaches such as irrigation and tile drainage, which may not be sustainable in the long term. A more sustainable approach to combat episodes of floods and droughts is to increase soil water storage and the overall green water efficiency of agroecosystems. Agricultural practices that promote “continuous living cover,” such as perennial grasses, agroforestry and cover crops, can improve water management relative to annual crop systems. Such practices ensure living roots in agricultural systems throughout the year and offer an approach to agroecosystem design that mimics ecological dynamics of native perennial vegetation. We review how these practices have been shown to improve elements of the water balance in a range of environments, with an emphasis on increased soil hydrologic function. A specific focus on the agriculturally intensive state of Iowa provides insight into how land use centered on agroecological principles affords greater water resilience, for individual farms as well as for broader community and ecosystem health.
The effectiveness of multi-component goal setting interventions for changing physical activity behaviour: a systematic review and meta-analysis

ABSTRACT Drawing from goal setting theory (Latham & Locke, 1991; Locke & Latham, 2002; Locke et al., 1981), the purpose of this study was to conduct a systematic review and meta-analysis of multi-component goal setting interventions for changing physical activity (PA) behaviour. A literature search returned 41,038 potential articles. Included studies consisted of controlled experimental trials wherein participants in the intervention conditions set PA goals and their PA behaviour was compared to participants in a control group who did not set goals. A meta-analysis was ultimately carried out across 45 articles (comprising 52 interventions, 126 effect sizes, n = 5912) that met eligibility criteria using a random-effects model. Overall, a medium, positive effect (Cohen's d(SE) = . 552(.06), 95% CI = . 43–. 67, Z = 9.03, p < . 001) of goal setting interventions in relation to PA behaviour was found. Moderator analyses across 20 variables revealed several noteworthy results with regard to features of the study, sample characteristics, PA goal content, and additional goal-related behaviour change techniques. In conclusion, multi-component goal setting interventions represent an effective method of fostering PA across a diverse range of populations and settings. Implications for effective goal setting interventions are discussed.
Design Considerations for Memristive Crossbar Physical Unclonable Functions

Hardware security has emerged as a field concerned with issues such as integrated circuit (IC) counterfeiting, cloning, piracy, and reverse engineering. Physical unclonable functions (PUF) are hardware security primitives useful for mitigating such issues by providing hardware-specific fingerprints based on intrinsic process variations within individual IC implementations. As technology scaling progresses further into the nanometer region, emerging nanoelectronic technologies, such as memristors or RRAMs (resistive random-access memory), have become interesting options for emerging computing systems. In this article, using a comprehensive temperature dependent model of an HfOx (hafnium-oxide) memristor, based on experimental measurements, we explore the best region of operation for a memristive crossbar PUF (XbarPUF). The design considered also employs XORing and a column shuffling technique to improve reliability and resilience to machine learning attacks. We present a detailed analysis for the noise margin and discuss the scalability of the XbarPUF structure. Finally, we present results for estimates of area, power, and delay alongside security performance metrics to analyze the strengths and weaknesses of the XbarPUF. Our XbarPUF exhibits nearly ideal (near 50%) uniqueness, bit-aliasing and uniformity, good reliability of 90% and up (with 100% being ideal), a very small footprint, and low average power consumption ≈104μW.
How inter-city high-speed rail influences tourism arrivals: evidence from social media check-in data

This paper attempts to investigate the impacts of inter-city high-speed rail (HSR) on tourism arrivals by employing a novel data of check-ins generated from social media. This type of check-in data collected in a case study (Hangzhou, China) reveals its high correlation with tourism activities and is feasible to act as a proxy of real tourism arrivals. A nonlinear regression model is developed to discover the temporal redistribution of tourism arrivals caused by HSR on weekends and holidays. Results show that Nanjing–Hangzhou HSR can significantly raise the number of visitors from Nanjing with a growth of 29.44% on Saturdays and 41.72% on Sundays. Further analysis on hourly distribution of these check-ins on weekends detects early arrival on Friday nights and longer stay on Sunday afternoons after HSR operates. Moreover, negative effect of seasonal climate change on tourism is also alleviated by HSR. This paper verifies the effectiveness of social media check-in data in tourism research and proposes practicable methodologies to quantitatively analyse this type of data.
Subcellular localization of an intermediate filament protein and its mRNA in glial cells

Eucaryotic mRNAs are generally localized in the cell body, where most protein synthesis occurs. We have found that mRNAs encoding the glial intermediate filament protein are spatially distributed in the glial cell cytoplasm close to the location of the glial filaments. Whereas the glial filament protein mRNA was located predominantly in the distal process, actin mRNA was found almost exclusively in the apical portion of the glial cell. This pattern of mRNA localization might provide a mechanism for synthesis of proteins in specific subcellular compartments by mRNA translation locally.
Interleukin-10 Improves Outcome and Alters Proinflammatory Cytokine Expression after Experimental Traumatic Brain Injury

Traumatic injury to the central nervous system initiates inflammatory processes that are implicated in secondary tissue damage. These processes include the synthesis of proinflammatory cytokines, leukocyte extravasation, vasogenic edema, and blood-brain barrier breakdown. Interleukin-10 (IL-10), a cytokine with antiinflammatory properties, negatively modulates proinflammatory cascades at multiple levels. We examined the hypothesis that IL-10 treatment can improve outcome in a clinically relevant model of traumatic brain injury (TBI). IL-10 was administered via different routes and dosing schedules in a lateral fluid-percussion model of TBI in rats. Intravenous administration of IL-10 (100 micrograms) at 30 min before and 1 h after TBI improved neurological recovery and significantly reduced TNF expression in the traumatized cortex at 4 h after injury. Such treatment was associated with lower IL-1 expression in the injured hippocampus, and to a lesser extent, in the injured cortex. Subcutaneous IL-10 administration (100 micrograms) at 10 min, 1, 3, 6, 9, and 12 h after TBI also enhanced neurological recovery. In contrast, intracerebroventricular administration of IL-10 (1 or 6 micrograms) at 15 min, 2, 4, 6, and 8 h after TBI was not beneficial. These results indicate that IL-10 treatment improves outcome after TBI and suggest that this improvement may relate, in part, to reductions in proinflammatory cytokine synthesis.
Influence of percutaneous transluminal angioplasty on transcutaneous oxygen pressure in patients with peripheral arterial occlusive disease.

PURPOSE To determine in a prospective controlled trial the effect of percutaneous transluminal angioplasty (PTA) on skin oxygen supply and microcirculation as measured by means of transcutaneous oxygen pressure in patients with disabling lower-limb ischemia compared with that in patients who underwent intraarterial angiography for the assessment of disabling lower-limb ischemia. MATERIALS AND METHODS Thirty-four patients (17 men, 17 women; mean age, 68.6 years +/- 9.8 [SD]) with peripheral arterial occlusive disease (PAOD) (claudication, n = 15; critical ischemia, n = 19) underwent transcutaneous oxygen pressure measurement at the dorsum of the foot 1 day before PTA, during PTA, 1 day after PTA, and 6 weeks after PTA. Measurements were obtained with the patient in the supine and erect sitting positions, as well as after exercise. Thirty-one patients (21 men, 10 women; mean age, 68.5 years +/- 9.3) with symptomatic PAOD who were undergoing intraarterial angiography served as the control group. RESULTS Mean pressure before PTA was 31.6 mm Hg +/- 24 in the supine position, 50.8 mm Hg +/- 22 in the sitting position, and 22.2 mm Hg +/- 23 after exercise. Immediately after PTA, a significant increase to 34 mm Hg +/- 20 in the supine position was noted (P <.05). One day after PTA, pressure was 37.3 mm Hg +/- 20 for the supine position and 52 mm Hg +/- 20 for the sitting position. Six weeks after treatment, a further significant increase to 43.9 mm Hg +/- 19 in the supine position, 61 mm Hg +/- 15 in the sitting position, and 44.7 mm Hg +/- 24 after exercise was noted (P <.05). In the control group, a significant pressure decrease immediately after and 1 day after angiography was noted (P <.05). Measurements returned to baseline at 6 weeks follow-up. CONCLUSION PTA has a positive effect on oxygen supply to the skin in patients with PAOD. Conversely, intraarterial angiography in patients with PAOD deteriorates skin microcirculation temporarily.
Validation of a Standardized Method for Enumerating Circulating Endothelial Cells and Progenitors: Flow Cytometry and Molecular and Ultrastructural Analyses

Purpose: Antigenic overlap among circulating endothelial cells (CEC) and progenitors (CEP), platelets, and other blood cells led to the need to develop a reliable standardized method for CEC and CEP quantification. These cells are emerging as promising preclinical/clinical tools to define optimal biological doses of antiangiogenic therapies and to help stratify patients in clinical trials. Experimental Design: We report the experimental validation of a novel flow cytometry method that precisely dissects CEC/CEP from platelets and other cell populations and provides information about CEC/CEP viability. Results: Sorted DNA/Syto16+CD45−CD31+CD146+ CECs, investigated by electron microscopy, were found to be bona fide endothelial cells by the presence of Weibel-Palade bodies. More than 75% of the circulating mRNAs of the endothelial-specific gene, VE-cadherin, found in the blood were present in the sorted population. CECs were 140 ± 171/mL in healthy subjects (n = 37) and 951 ± 1,876/mL in cancer patients (n = 78; P < 0.0001). The fraction of apoptotic/necrotic CECs was 77 ± 14% in healthy subjects and 43 ± 23% in cancer patients (P < 0.0001). CEPs were 181 ± 167/mL in healthy donors and 429 ± 507/mL in patients (P = 0.00019). Coefficients of variation were 4 ± 4% (intrareader), 17 ± 4% (interreader), and 17 ± 7% (variability over 0-72 h), respectively. Parallel samples were frozen by a standardized protocol. After thawing, coefficients of variation were 12 ± 8% (intrareader), 16 ± 10% (interreader), and 26 ± 16% (variability over 0-14 days of frozen storage), respectively. Conclusions: This procedure enumerates a truly endothelial cell population with limited intrareader and interreader variability. It appears possible to freeze samples for large-scale CEC enumeration during clinical trials. This approach could be enlarged to investigate other angiogenic cell populations as well.
Caries risk assessment and prevention: strategies for Head Start, Early Head Start, and WIC.

OBJECTIVES This review updates the evidence regarding caries risk assessment for infants, toddlers, and preschool children and formulates recommendations for preventive strategies for WIC, Head Start, and Early Head Start. METHODS Literature on caries risk assessment and preventive strategies for infants, toddlers, and preschool children were reviewed and synthesized. Recommendations for WIC, Head Start, and Early Head Start were made based on the review. RESULTS Individual caries risk for children in WIC, Head Start, and Early Head Start should be based on: (1) previous caries experience, (2) precavity lesions, (3) visible plaque, and (4) perceived risk by examiners. Recommended preventive strategies for WIC and Head Start populations include: (1) daily toothbrushing in Head Start centers using fluoridated toothpaste; (2) fluoride varnish application to children enrolled in WIC, Head Start, and Early Head Start; (3) use of chlorhexidine gels and varnishes (following FDA approval); and (4) increased use of sealants on children with precavity pit and fissure lesions. CONCLUSIONS Early screening, risk assessment, and preventive programs in WIC, Head Start, and Early Head Start populations hold a great deal of promise for preventing dental decay in high-risk children.
A Quantitative Study of Academic Library Administrators Using Bolman and Deal's Leadership Orientation Framework

Patrick Pauken, Advisor The Bolman and Deal (1984, 2003) leadership orientation framework was used in this quantitative study to determine library administrator frame preference and what effects the following independent variables have on frame preference: administrator role, total years of administrator experience, and self-perception of effectiveness in current position. Portions of the Bolman and Deal (1990) Leadership Orientation Instrument-Self (LOI-Self) were used. The survey was sent to 627 library administrators at 120 higher education institutions in Michigan and Ohio. There were 328 usable responses for a 54% response rate. More women (68%) than men (32%) participated in the survey. Most participants were White (90%). The academic library administrators in this sample had a single primary frame preference for the human resources frame using the cut score of 32. The upper-level administrators preferred the human resources frame followed by the structural, political, and symbolic frames. The middle-level academic library administrators preferred the human resources frame followed by the structural, symbolic, and political. Four three-way (2x2x3) ANOVAs were conducted. Administrator role was broken down by upper level-administrators (deans, directors, associate/assistant deans, associate/assistant directors) and middle-level administrators (chairs, coordinators, heads, managers, supervisors and team leaders). Total years of administrator experience was categorized by those with fewer than 15 years of experience and those with 15 or more years of experience while self-perception of effectiveness in current position was categorized by moderate, high, and highest. Inferential statistics revealed no statistical significance for any of the interaction effects. However, selfperception of effectiveness in current position as a main effect was statistically significant across
Self-association and Chaperone Activity of Hsp27 Are Thermally Activated*

The small heat shock protein 27 (Hsp27) is an oligomeric, molecular chaperone in vitro. This chaperone activity and other physiological roles attributed to Hsp27 have been reported to depend on the state of self-association. In the present work, we have used sedimentation velocity experiments to demonstrate that the self-association of Hsp27 is independent of pH and ionic strength but increases significantly as the temperature is increased from 10 to 40 °C. The largest oligomers formed at 10 °C are ∼8-12 mer, whereas at 40 °C oligomers as large as 22-30 mer are observed. Similarly, the chaperone activity of Hsp27 as indicated by its ability to inhibit dithiothreitol-induced insulin aggregation also increases with increased temperature, with a particularly sharp increase in activity as temperature is increased from 34 to 43 °C. Similar studies of an Hsp27 triple variant that mimics the behavior of the phosphorylated protein establish that this protein has greatly diminished chaperone activity that responds minimally to increased temperature. We conclude that Hsp27 can exploit a large number of oligomerization states and that the range of oligomer size and the magnitude of chaperone activity increase significantly as temperature is increased over the range that is relevant to the physiological heat shock response.