Miracle-dz/UniFAR-FTUs huggingface dataset:
Evolution of alanine:glyoxylate aminotransferase 1 peroxisomal and mitochondrial targeting. A survey of its subcellular distribution in the livers of various representatives of the classes Mammalia, Aves and Amphibia.

As part of a wider study on the molecular evolution of alanine:glyoxylate aminotransferase 1 (AGT1) intracellular compartmentalization, we have determined the subcellular distribution of immunoreactive AGT1, using postembedding protein A-gold immunoelectron microscopy, in the livers of various members of the classes Mammalia, Aves, and Amphibia. As far as organellar distribution is concerned, three categories could be distinguished. In members of the first category (type I), all, or nearly all, of the immunoreactive AGT1 was concentrated within the peroxisomes. In the second category (type II), AGT1 was found more evenly distributed in both peroxisomes and mitochondria. In the third category (type III), AGT1 was localized mainly within the mitochondria with much lower, but widely variable, amounts in the peroxisomes. Type I animals include the human, two great apes (gorilla, orangutan), two Old World monkeys (anubis baboon, Japanese macaque), a New World monkey (white-faced Saki monkey), a lago, morph (European rabbit), a bat (Seba's short-tailed fruit bat), two caviomorph rodents (guinea pig, orange-rumped agouti), and two Australian marsupials (koala, Bennett's wallaby). Type II animals include two New World monkeys (common marmoset, cotton-top tamarin), three prosimians (brown lemur, fat-tailed dwarf lemur, pygmy slow loris), five rodents (a hybrid crested porcupine, Colombian ground squirrel, laboratory rat, laboratory mouse, golden hamster), an American marsupial (grey short-tailed opossum), and a bird (raven). Type III animals include the large tree shrew, three insectivores (common Eurasian mole, European hedgehog, house shrew), four carnivores (domestic cat, ocelot, domestic dog, polecat ferret), and an amphibian (common frog). In addition to these categories, some animals (e.g. guinea pig, common frog) possessed significant amounts of cytosolic AGT1. Whereas the subcellular distribution of AGT1 in some orders (e.g. Insectivora and Carnivora) did not appear to vary markedly between the different members, in other orders (e.g. Primates, Rodentia and Marsupialia) it fluctuated widely between the different species. Phylogenetic analysis indicates that the subcellular distribution of AGT1 has changed radically on numerous occasions during the evolution of mammals. The new observations presented in this paper are compatible with our previous demonstration of a relationship between AGT1 subcellular distribution and either present or putative ancestral dietary habit, and our previous suggestion that the molecular evolution of the AGT gene has been markedly influenced by dietary selection pressure.
Progressive resistance training in patients with shoulder impingement syndrome: a randomized controlled trial.

OBJECTIVE To assess pain, function, quality of life, and muscle strength in patients with shoulder impingement syndrome who participated in muscle strengthening exercises. METHODS A total of 60 patients diagnosed with shoulder impingement syndrome were selected from the clinics of the Federal University of São Paulo and randomly distributed into experimental and control groups. Patients were evaluated regarding pain, function, quality of life, muscle strength, and the number of antiinflammatory drugs and analgesics taken. Patients then participated in the progressive resistance training program for the musculature of the shoulder, which was held twice a week for 2 months, while the control group remained on a waiting list. RESULTS Sixty patients were randomly allocated to the experimental group (21 women and 9 men, mean age 56.3 years) and control group (25 women and 5 men, mean age 54.8 years). Patients from the experimental group showed an improvement from 4.2 cm to 2.4 cm on a 10-cm visual analog scale (P < 0.001) regarding pain at rest and from 7.4 cm to 5.2 cm (P < 0.001) regarding pain during movement. Function went from 44.0 to 33.2 (P < 0.007) using the Disabilities of the Arm, Shoulder, and Hand assessment and domains from the Short Form 36. There was a statistically significant difference in improvement in pain and function between patients in the experimental group and those in the control group (P < 0.05). CONCLUSION The progressive resistance training program for the musculature of the shoulder in patients with shoulder impingement syndrome was effective in reducing pain and improving function and quality of life.
Cardiac Outcome Prevention Effectiveness of Glucocorticoids in Acute Decompensated Heart Failure: COPE-ADHF Study

Introduction: Newly emerging evidence showed that glucocorticoids could potentiate natriuretic peptides' action by increasing the density of natriuretic peptide receptor A, leading to a potent diuresis and a renal function improvement in patients with acute decompensated heart failure (ADHF). Therefore, glucocorticoid therapy may be used in patients with ADHF. Methods: One hundred two patients with ADHF were randomized to receive glucocorticoids or standard treatment. Change from baseline in serum creatinine (SCr) at day 7 and cardiovascular death within 30 days were recorded. The study was terminated early because of slow site initiation and patient enrolment. Results: Glucocorticoid therapy seemed to be well tolerated. There was a remarkable SCr reduction after 7 days treatment. The change from baseline in SCr is −0.14 mg/dL in glucocorticoid group versus −0.02 mg/dL in standard treatment group (P < 0.05). Although sample size is limited, a cardiovascular death reduction at 30 days was observed in glucocorticoid group with odds ratio of 0.26 (3 deaths in glucocorticoid vs. 10 deaths in standard treatment group, P < 0.05). The survival benefit associated with glucocorticoid therapy persisted during the follow-up. Patient-assessed dyspnea and physician-assessed global clinical status were also improved in glucocorticoid group. Conclusions: Limited data indicate that glucocorticoid therapy may be used safely in patients with ADHF in short term. Glucocorticoid therapy did not cause heart failure deterioration. Further investigations are warranted.
Gadolinium nanoparticles and contrast agent as radiation sensitizers

The goal of the present study was to evaluate and compare the radiosensitizing properties of gadolinium nanoparticles (NPs) with the gadolinium contrast agent (GdCA) Magnevist® in order to better understand the mechanisms by which they act as radiation sensitizers. This was determined following either low energy synchrotron irradiation or high energy gamma irradiation of F98 rat glioma cells exposed to ultrasmall gadolinium NPs (GdNPs, hydrodynamic diameter of 3 nm) or GdCA. Clonogenic assays were used to quantify cell survival after irradiation in the presence of Gd using monochromatic x-rays with energies in the 25 keV–80 keV range from a synchrotron and 1.25 MeV gamma photons from a cobalt-60 source. Radiosensitization was demonstrated with both agents in combination with X-irradiation. At the same concentration (2.1 mg mL−1), GdNPS had a greater effect than GdCA. The maximum sensitization-enhancement ratio at 4 Gy (SER4Gy) was observed at an energy of 65 keV for both the nanoparticles and the contrast agent (2.44 ± 0.33 and 1.50 ± 0.20, for GdNPs and GdCA, respectively). At a higher energy (1.25 MeV), radiosensitization only was observed with GdNPs (1.66 ± 0.17 and 1.01 ± 0.11, for GdNPs and GdCA, respectively). The radiation dose enhancements were highly ‘energy dependent’ for both agents. Secondary-electron-emission generated after photoelectric events appeared to be the primary mechanism by which Gd contrast agents functioned as radiosensitizers. On the other hand, other biological mechanisms, such as alterations in the cell cycle may explain the enhanced radiosensitizing properties of GdNPs.
Bacterial Association in the Gastrointestinal Tract of Beagle Dogs

Nine male beagle dogs, housed in either a conventional or locked environment for 2.5 years, were killed, and the bacterial flora present in various regions of each gastrointestinal tract was assessed by culture techniques, light microscopy, and scanning electron microscopy. All dogs possessed a complex microflora in their colons; in almost every dog anaerobes predominated. The highest number of bacteria cultured was 1010/g (dry weight) of tissue and contents; highest counts obtained with a Petroff-Hauser counting chamber were 1010/ml (wet weight). Although there was a consistency in the detectable genera, there were also noticeable differences in the flora of dogs housed under different environmental conditions. These differences included qualitative and quantitative changes in the flora as well as alterations in the distribution and localization of microorganisms along the gastrointestinal tract and in the crypts of Lieberkuhn. No bacterial layers were detected on the surfaces of stomach or proximal bowel in any of the dogs. Dogs housed in a conventional, open, environment had bacteria that occurred in layers on their ceca and colons and in their crypts of Lieberkuhn; however, dogs housed under “locked” environmental conditions did not possess them or had them less frequently. Dogs removed from the locked environment and kept (30 days) in conventional housing conditions were the only ones with detectable segmented filamentous microbes in their ilea. This study shows that the microbial flora does not simplify when dogs are housed in a locked environment. Indeed, it may increase in complexity and cause alterations in the bacterial flora that is associated closely with gastrointestinal epithelial cells and crypts of Lieberkuhn.
Environment-related and host-related factors affecting the occurrence of lice on rodents in Central Europe

SUMMARY We studied the effects of environment- (habitat, season) and host-related (sex, body mass) factors on the occurrence of four species of lice (Insecta:Phthiraptera:Anoplura) on six rodent species (Rodentia:Muridae). We asked how these factors influence the occurrence of lice on an individual host and whether different rodent–louse associations demonstrate consistent trends in these effects. We found significant effects of at least one environment-related and at least one host-related factor on the louse occurrence in five of six host–louse associations. The effect of habitat was significant in two associations with the occurrence of lice being more frequent in lowland than in mountain habitats. The effect of season was significant in five associations with a higher occurrence of infestation during the warm season in four associations and the cold season in one association. Host sex affected significantly the infestation by lice in three associations with a higher frequency of infestation in males. Host body mass affected the occurrence of lice in all five associations, being negative in wood mice and positive in voles. In conclusion, lice were influenced not only by the host- but also by environment-related factors. The effects of the latter could be mediated via life history parameters of a host.
African American women and men at high and low risk for hypertension: a signal detection analysis of NHANES III, 1988-1994.

BACKGROUND African Americans have some of the highest rates of hypertension in the world. This study identified subgroups of U.S. African American women and men with particularly high and low rates of hypertension. METHODS Data are presented for 1,911 Black women and 1,657 Black men, ages 25-84 from the Third National Health and Nutrition Examination Survey, 1988-1994. Signal detection methodology identified high and low risk subgroups; stratified analyses characterized the population of hypertensives. RESULTS We identified 12 distinct subgroups with highly variable rates of hypertension (11-78%). The two groups with the highest rates of hypertension (>70% hypertensive) were more likely to be middle aged or older, less educated, overweight or obese (>80%), physically inactive (50%), and to have diabetes (28 and 100% diabetic). The two groups with the lowest hypertension rates (<18% hypertensive) were more likely to be younger, but were also overweight or obese (>50%). Among hypertensives, those who were uncontrolled and not on antihypertensive medications were distinguished by their male gender, younger age, and infrequent contact with a physician. CONCLUSIONS Hypertension rates vary substantially within African Americans, illustrating the need for effective weight management, diabetes control, and increased access to health care for those at highest risk.
Rab3A negatively regulates activity‐dependent modulation of exocytosis in bovine adrenal chromaffin cells

Members of the Rab family of monomeric GTPases have been implicated in vesicle trafficking, and Rab3A, located on synaptic vesicles in neurones and secretory vesicles in neuroendocrine cells, is likely to be involved in vesicle fusion leading to neurotransmitter release. A hydrolysis‐deficient mutant of Rab3A, Rab3AQ81L, has been shown to potently inhibit hormone release. Here we show that the inhibition of hormone release by Rab3AQ81L is activity‐dependent. Bovine adrenal chromaffin cells were induced to express Rab3AQ81L and green fluorescent protein by adenoviral gene transfer of a bicistronic construct. Fluorescent cells were stimulated with single depolarizations and trains of depolarizing pulses in whole cell perforated patch clamp recordings, and exocytosis was detected with cell capacitance measurements and carbon fibre amperometry. When single depolarizations were used to evoke exocytosis, cells expressing Rab3AQ81L showed a 50% reduction in response amplitude. When trains of brief depolarizations (10 or 40 ms) were used to evoke exocytosis, responses rapidly declined to zero in cells expressing Rab3AQ81L. Wild‐type Rab3A had effects similar to Rab3AQ81L, causing significant inhibition of exocytosis only during repetitive stimulation. Expression of Rab5A did not alter exocytosis evoked by single depolarizations or repetitive stimulation. Applying a long duration depolarization in the middle of a stimulus train revealed that exocytotic efficacy (capacitance increase per amount of calcium influx) was not decreased in Rab3AQ81L‐expressing cells. Instead, the activity‐dependent increase in exocytotic efficacy observed in control cells did not occur in Rab3AQ81L‐expressing cells. Our results suggest that Rab3A in the GTP bound conformation prevents activity‐dependent facilitation.
Transcription-coupled repair of oxidative DNA damage in human cells: mechanisms and consequences.

Transcription-Coupled Repair of Oxidative DNA Damage in Human Cells: Mechanisms and Consequences Susan Tsutakawa and Priscilla K. Cooper* Life Sciences Division, Lawrence Berkeley National Laboratory, University of California, Berkeley, CA 94720 Running Title: Transcription-Coupled Repair of Oxidative Damage * To whom correspondence should be addressed: Priscilla K. Cooper Life Sciences Division, Mail Stop 74-157 Lawrence Berkeley National Laboratory 1 Cyclotron Road Berkeley, CA 94720 Tel: (510) 486-7346 Fax: (510) 486-6816 Email: pkcooper@lbl.gov
Molecular Cytogenetics of Human Single Pronucleated Zygotes

The aim of the present study was to use fluorescence in situ hybridization to analyze the chromosome status of zygotes with a single pronucleus from in vitro fertilization (IVF) and intracytoplasmic sperm injection (ICSI) treatment cycles. In addition, we performed immunocytochemical detection of nuclear lamins and histone H3 trimethylated at lysine-9, Me(3)H3K9. Zygotes were processed 24 hours after insemination or injection to assure the absence of asynchrony. In opposition to previous results, we observed 2 pronuclei in 16 of 18 IVF zygotes and 40 of 64 ICSI zygotes, suggesting premature pronuclear breakdown. In IVF and ICSI zygotes, the rate of normal diploidy was only 6 of 16 and 27 of 56, respectively, suggesting that monopronucleated zygotes should not be used in assisted reproductive treatments. The possible mechanisms are discussed and compared to previous studies of monopronucleated zygotes.
Risk factors for breast cancer in Turkish women with early pregnancies and long-lasting lactation--a case-control study.

A hospital-based case-control study was carried out among 504 women with breast cancer and 610 controls to analyse the risk factors for breast cancer in Turkey. Adjusted odds ratios (ORs) and 95% confidence intervals (CIs) for each risk factor were obtained from logistic regression analysis. Risk factors for breast cancer were found to be long-term lactation (> or = 5 years versus never OR 0.31, 95% CI 0.12-0.79), young age at menarche (< 15 years versus > or = 15 OR 1.72, 95% CI 1.30-2.28), late age at first full-term pregnancy (> or = 30 versus < 20 OR 2.86, 95% CI 1.32-6.21), oral contraceptive use (ever versus never OR 1.51, 95% CI 1.10-2.08), positive family history (positive versus negative OR 2.81, 95% CI 1.35-5.82), and menstrual irregularity (yes versus no OR 1.61, 95% CI 1.05-2.49). The results of the present study will lead to a better understanding of the risk factors for breast cancer in a developing country.
Ultrasound-guided foam sclerotherapy: safety and efficacy

Ultrasound-guided foam sclerotherapy (UGFS) may be defined as the instillation into a vein of a sclerosing agent that has been rendered foam in order to occlude the target vein. There has been a gradual evolution from liquid sclerotherapy to UGFS in recent years for the ablation of insufficient superficial veins, although reports of sclerosis of abnormal lower extremity veins using UGFS have appeared in the world literature since 1950. Momentum for this treatment modality was accelerated by Tessari’s description of an easy method by which stable foam can be produced. Based on reports describing broad international experience, UGFS is enjoying widespread acceptance in the treatment of patients with superficial venous insufficiency. Foam is produced by agitating a gas with a liquid detergent sclerosant, most commonly via connecting devices between two syringes. Foam produced for injection should be durable, yet once injected quickly disintegrates to protect against gas embolization. Air has been most commonly employed as the gas, but carbon dioxide (CO2) or gas combining carbon dioxide and oxygen (O2) may have certain advantages with regard to foam solubility. Polidocanol and sodium tetradecyl sulphate are most commonly used to produce foam. Foam can be instilled via indwelling catheter or by direct needle puncture, and has become an efficient complement or alternative to microphlebectomy, endovenous thermal ablation or stripping. All clinical, aetiological, anatomical and pathological elements C2–6 patients have been treated with UGFS, and success has been achieved in treating such disease processes as truncal and nontruncal venous insufficiency, groin recurrence, venous malformations, sciatic nerve varices and perforatoring veins. Reports of successful vein ablation using UGFS have varied, and investigation continues to improve efficacy. Foam sclerotherapy is generally regarded as safe, although infrequent or rare complications such as deep vein thrombosis, visual disturbances, headache and neurological events have been reported. Having also been described with liquid sclerotherapy, such adverse events are nearly always of limited duration and clinical significance, but because of the incidence of right-to-left shunts (30% or higher), study of these events and methods to reduce incidence is ongoing. It is believed by most that efficacy, simplicity, economy and serial applications make UGFS an attractive and efficient treatment modality in the armamentarium of the phlebologist. Many of these concepts are explored in this Special Edition. The editor would like to thank all contributors for their outstanding work in making this Special Issue of Phlebology a valuable resource for phlebologists worldwide.
OF THE EXPERIMENTAL ANALYSIS OF BEHAVIOR COGNITION , BEHA VIOR , AND THE EXPERIMENTAL ANALYSIS OF BEHA VIOR

A case history illustrates how one research program in the experimental analysis of behavior evolved somewhat differently from the modal research program represented in this journal. A chief issue that seems to be responsible for this difference is the role attributed to theory in behavioral research: Skinner's views on the nature and function of theory and on the nature of observation combine to produce a certain kind of picture of behavior. The classic conception of reinforcement contingencies is tied to this particular picture. But this picture may be incompatible with, and certainly is different from, other possible pictures. Reinforcement contingencies that place greater emphasis on the local temporal patterning of behavior seem tied to some of these alternative pictures of what behavior is. These other pictures encourage a wide range of theoretical approaches, including cognitive ones, various kinds of mathematical analyses, and computer-simulation methods to characterize entire behavior streams. In the future, perhaps the experimental analysis of behavior will accept a somewhat different range of views on the nature and function of theory, a correspondingly different set of experimental methods, and alternative ways of talking about behavior.
Modulation of cardiac macrophages by phosphatidylserine-presenting liposomes improves infarct repair

Herein we investigated a new strategy for the modulation of cardiac macrophages to a reparative state, at a predetermined time after myocardial infarction (MI), in aim to promote resolution of inflammation and elicit infarct repair. The strategy employed intravenous injections of phosphatidylserine (PS)-presenting liposomes, mimicking the anti-inflammatory effects of apoptotic cells. Following PS-liposome uptake by macrophages in vitro and in vivo, the cells secreted high levels of anti-inflammatory cytokines [transforming growth factor β (TGFβ) and interleukin 10 (IL-10)] and upregulated the expression of the mannose receptor—CD206, concomitant with downregulation of proinflammatory markers, such as tumor necrosis factor α (TNFα) and the surface marker CD86. In a rat model of acute MI, targeting of PS-presenting liposomes to infarct macrophages after injection via the femoral vein was demonstrated by magnetic resonance imaging (MRI). The treatment promoted angiogenesis, the preservation of small scars, and prevented ventricular dilatation and remodeling. This strategy represents a unique and accessible approach for myocardial infarct repair.
Fertility and Pregnancy Complications in Women With Autosomal Dominant Polycystic Kidney Disease

Fertility and pregnancy complications were assessed in 137 women at risk of having inherited the gene for autosomal dominant polycystic kidney disease. Seventy-six (55%) of these subjects were found to have polycystic kidney disease (multiple renal cysts). The remaining 61 women served as controls. The prevalence of fertility, spontaneous abortion, stillbirth, and symptoms consistent with urinary tract infection were not different in the two groups. However, the frequency of hypertension first diagnosed during pregnancy (with or without preeclampsia or eclampsia) and the frequency of pregnancy-unrelated hypertension were higher in women with polycystic kidney disease. No evidence was found that pregnancy had an adverse effect on the natural course of polycystic kidney disease. The incidence of renal failure was not higher in women with polycystic kidney disease who had three or more pregnancies than in women of similar ages who had two, one, or no pregnancies.