Miracle-dz/UniFAR-FTUs huggingface dataset:
From Tweets to Polls: Linking Text Sentiment to Public Opinion Time Series

We connect measures of public opinion measured from polls with sentiment measured from text. We analyze several surveys on consumer conﬁdence and political opinion over the 2008 to 2009 period, and ﬁnd they correlate to sentiment word frequencies in contempora- neous Twitter messages. While our results vary across datasets, in several cases the correlations are as high as 80%, and capture important large-scale trends. The re- sults highlight the potential of text streams as a substi- tute and supplement for traditional polling. consumer conﬁdence and political opinion, and can also pre- dict future movements in the polls. We ﬁnd that temporal smoothing is a critically important issue to support a suc- cessful model.
Computer-assisted reader software versus expert reviewers for polyp detection on CT colonography.

OBJECTIVE The purpose of our study was to assess the sensitivity of computer-assisted reader (CAR) software for polyp detection compared with the performance of expert reviewers. MATERIALS AND METHODS A library of colonoscopically validated CT colonography cases were collated and separated into training and test sets according to the time of accrual. Training data sets were annotated in consensus by three expert radiologists who were aware of the colonoscopy report. A subset of 45 training cases containing 100 polyps underwent batch analysis using ColonCAR version 1.2 software to determine the optimum polyp enhancement filter settings for polyp detection. Twenty-five consecutive positive test data sets were subsequently interpreted individually by each expert, who was unaware of the endoscopy report, and before generation of the annotated reference via an unblinded consensus interpretation. ColonCAR version 1.2 software was applied to the test cases, at optimized polyp enhancement filter settings, to determine diagnostic performance. False-positive findings were classified according to importance. RESULTS The 25 test cases contained 32 nondiminutive polyps ranging from 6 to 35 mm in diameter. The ColonCAR version 1.2 software identified 26 (81%) of 32 polyps compared with an average sensitivity of 70% for the expert reviewers. Eleven (92%) of 12 polyps > or = 10 mm were detected by ColonCAR version 1.2. All polyps missed by experts 1 (n = 4) and 2 (n = 3) and 12 (86%) of 14 polyps missed by expert 3 were detected by ColonCAR version 1.2. The median number of false-positive highlights per case was 13, of which 91% were easily dismissed. CONCLUSION ColonCAR version 1.2 is sensitive for polyp detection, with a clinically acceptable false-positive rate. ColonCAR version 1.2 has a synergistic effect to the reviewer alone, and its standalone performance may exceed even that of experts.
Groundwater Quality and Suitability for Different Uses in the Saloum Area of Senegal

Hydrogeochemical analyses were conducted on groundwater sampled from the Saloum aquifer, in southern Senegal. The objective was to identify the chemical processes that control hydrochemistry and to assess the quality of groundwater for determining its suitability for drinking and agricultural purposes. Water samples were collected from 79 wells during the dry season in May 2012, and were subjected to analysis for chemical characteristics (major ions), pH, electrical conductivity (EC) and total dissolved solid (TDS). The dominant hydrochemical facies observed for the groundwater samples are NaCl and CaHCO3. Gibbs plot depicts predominance of rock water interaction and evaporation processes controlling the water chemistry. Percentage of Na+, Residual Sodium Carbonate (RSC), Total Hardness (TH) and Sodium Adsorption Ratio (SAR) values were calculated. The results were compared with the standard guideline values recommended by the World Health Organization and agricultural water standards. The TDS in groundwater is less than 1200 mg/L and SAR values are less than 10. RSC values overall are less than 1.25 meq/L. Results show that the groundwater in the area has generally a low hardness and is fresh (95%) to brackish. The majority of groundwater samples are appropriate for domestic uses. The indexes for water irrigation compared with standard limits revealed that most of the Saloum groundwater samples fall in the suitable range for irrigation.
Comparison of outer membrane protein subtypes of Haemophilus influenzae type b isolates from healthy children in the general population and from diseased patients

Over a 12-month period we obtained throat cultures from 1,448 children less than 5 years of age attending well-child clinics and identified 24 carriers of Haemophilus influenzae type b (1.7%). The outer membrane protein subtypes of the strains from the carriers were compared to the subtypes of isolates from 50 patients with Haemophilus type b disease hospitalized in St. Louis, Mo. , during the same period (1981 to 1982), and the latter were compared to the subtypes of isolates from 51 patients hospitalized between 1977 and 1980. There were no significant differences in the frequencies of the five most common subtypes (1L, 1H, 2L, 2H, and 3L), comparing isolates from the carriers to those from the patients. However, 5 of the 24 throat isolates had the unusual 13L subtype compared with only 1 of the 50 invasive isolates (P = 0.02). The lower frequency of 13L strains among the invasive isolates suggests that type b isolates with this subtype may be less pathogenic than type b isolates with other subtypes. Subtype 2L strains accounted for only 2% of recent cerebrospinal fluid or blood isolates, compared with 22% of those from 1977 to 1980 (P = 0.02). Subtype 1H and 3L strains together accounted for 73%, compared with 47% of the earlier ones (P = 0.02). Thus, temporal shifts may also occur in the subtype distribution of Haemophilus type b strains causing invasive disease in a community.
Comparison of Prevalence and Antimicrobial Susceptibilities of Campylobacter spp. Isolates from Organic and Conventional Dairy Herds in Wisconsin

ABSTRACT The prevalence and antimicrobial susceptibilities of Campylobacter spp. isolates from bovine feces were compared between organic and conventional dairy herds. Thirty organic dairy herds, where antimicrobials are rarely used for calves and never used for cows, were compared with 30 neighboring conventional dairy farms, where antimicrobials were routinely used for animals for all ages. Fecal specimens from 10 cows and 10 calves on 120 farm visits yielded 332 Campylobacter isolates. The prevalence of Campylobacter spp. in organic and conventional farms was 26.7 and 29.1%, and the prevalence was not statistically different between the two types of farms. Campylobacter prevalence was significantly higher in March than in September, higher in calves than in cows, and higher in smaller farms than in large farms. The rates of retained placenta, pneumonia, mastitis, and abortion were associated with the proportion of Campylobacter isolation from fecal samples. The gradient disk diffusion MIC method (Etest) was used for testing susceptibility to four antimicrobial agents: ciprofloxacin, gentamicin, erythromycin, and tetracycline. Two isolates were resistant to ciprofloxacin, and none of isolates was resistant to gentamicin or erythromycin. Resistance to tetracycline was 45% (148 of 332 isolates). Tetracycline resistance was found more frequently in calves than in cows (P = 0.042), but no difference was observed between organic and conventional farms. When we used Campylobacter spp. as indicator bacteria, we saw no evidence that restriction of antimicrobial use on dairy farms was associated with prevalence of resistance to ciprofloxacin, gentamicin, erythromycin, and tetracycline.
EFFECT OF NPK FERTILIZATION ON BULB YIELD AND QUALITY OF ONION UNDER RECLAIMED CALCAREOUS SOIL CONDITIONS

Two field experiments were achieved with onion cv. Giza 20 at Nubaria Agricultural Research Station Farm during the two consecutive winter seasons of 2003/2004 and 2004/2005, to assess growth, yield and bulb quality response to nine different combinations of NPK fertilization (T1 = 60:00:00 NPK kg/fed. T2 = 90:00:00 NPK kg/fed. T3 = 120:00:00 NPK kg/fed. T4 = 60:30:00 NPK kg/fed. T5 = 90:30:00 NPK kg/fed. T6 = 120:30:00 NPK kg/fed. T7 = 60:30:24 NPK kg/fed. T8 = 90:30:24 NPK kg/fed. and T9 = 120:30:24 NPK kg/fed.) under reclaimed calcareous soil conditions. The combinations of NPK significantly affected most important bulb characteristics in this study. The positive effect of NPK addition was observed during the two seasons in the following characters; number of days to maturity, average bulb weight, marketable yield, total yield, and percentage of single and double bulbs. However, it is noticed only in one growing season on number of leaves, total soluble solids (T.S.S) contents of mature bulb and percentage of bolters, with the exception of plant height and percentage of sprouted bulbs (after six months of storage period) traits which did not show any significant effect under any NPK combination. High N rates treatments as T3 (120:00:00 NPK kg/fed.) and T6 (120:30:00 NPK kg/fed.) increased the number of days to bulb maturity viz. delayed bulbs maturity. While, low N rates treatments as T4 (60:30:00 NPK kg/fed.) and T7 J.Agric. &Env.Sci.Alex.Univ.,Egypt Vol.6 (1)2007 226 (60:30:24 NPK kg/fed.) decreased the number of days to
Mapping of Glucocorticoid Receptor DNA Binding Domain Surfaces Contributing to Transrepression of NF-κB and Induction of Apoptosis*

Glucocorticoids (GCs) function, in part, through the ability of the glucocorticoid receptor (GR) to activate gene expression and in part through the transrepression of AP-1 and NF-κB. Here we characterize the effect of GR DNA binding domain (DBD) mutations, previously analyzed for changes in the ability to activate gene expression or transrepress AP-1. We have identified a GR mutant capable of distinguishing between transrepression of NF-κB and AP-1. Using circular dichroism spectroscopy, we show that this mutation does not appreciably alter GR DBD conformation, suggesting that functional differences between the mutant and wild type protein are the result of an alteration of a specific interaction surface. These data suggest that transrepression of NF-κB and AP-1 occurs through distinct protein-protein interactions and argue against the hypothesis that transrepression occurs through competition for a single coactivator protein. Introduction of these mutations into GC-resistant CEM lymphoblastic T cells restored dexamethasone (DEX)-mediated apoptosis as did wild type GR regardless of whether these mutants were transrepression or activation defective. Thus, DEX-mediated apoptosis in transformed T cells is more complex than originally appreciated.
Knockdown of a Rice Stelar Nitrate Transporter Alters Long-Distance Translocation But Not Root Influx1[W][OA]

Root nitrate uptake is well known to adjust to the plant’s nitrogen demand for growth. Long-distance transport and/or root storage pools are thought to provide negative feedback signals regulating root uptake. We have characterized a vascular specific nitrate transporter belonging to the high-affinity Nitrate Transporter2 (NRT2) family, OsNRT2.3a, in rice (Oryza sativa ssp. japonica ‘Nipponbare’). Localization analyses using protoplast expression, in planta promoter-β-glucuronidase assay, and in situ hybridization showed that OsNRT2.3a was located in the plasma membrane and mainly expressed in xylem parenchyma cells of the stele of nitrate-supplied roots. Knockdown expression of OsNRT2.3a by RNA interference (RNAi) had impaired xylem loading of nitrate and decreased plant growth at low (0.5 mm) nitrate supply. In comparison with the wild type, the RNAi lines contained both nitrate and total nitrogen significantly higher in the roots and lower in the shoots. The short-term [15N]NO3− influx (5 min) in entire roots and NO3− fluxes in root surfaces showed that the knockdown of OsNRT2.3a in comparison with the wild type did not affect nitrate uptake by roots. The RNAi plants showed no significant changes in the expression of some root nitrate transporters (OsNRT2.3b, OsNRT2.4, and OsNAR2.1), but transcripts for nia1 (nitrate reductase) had increased and OsNRT2.1 and OsNRT2.2 had decreased when the plants were supplied with nitrate. Taken together, the data demonstrate that OsNRT2.3a plays a key role in long-distance nitrate transport from root to shoot at low nitrate supply level in rice.
Semantics of templates in a compositional framework for building logics

Abstract There is a growing need for abstractions in logic specification languages such as FO(·) and ASP. One technique to achieve these abstractions are templates (sometimes called macros). While the semantics of templates are virtually always described through a syntactical rewriting scheme, we present an alternative view on templates as second order definitions. To extend the existing definition construct of FO(·) to second order, we introduce a powerful compositional framework for defining logics by modular integration of logic constructs specified as pairs of one syntactical and one semantical inductive rule. We use the framework to build a logic of nested second order definitions suitable to express templates. We show that under suitable restrictions, the view of templates as macros is semantically correct and that adding them does not extend the descriptive complexity of the base logic, which is in line with results of existing approaches.
Seasonal Variability of the Cold Pool Over the Mid-Atlantic Bight Continental Shelf

The Mid-Atlantic Bight (MAB) Cold Pool is a distinctive cold (lower than 10 ∘C) and relatively fresh (lower than 34 practical salinity unit) water mass. It is located over the middle and outer shelf of the MAB, below the seasonal thermocline, and is attached to the bottom. Following this definition, we put forward a method that includes three criteria to capture and quantify Cold Pool characteristics, based on a 50-year (1958–2007) high-resolution regional ocean model hindcast. The seasonal climatology of the Cold Pool and its properties are investigated during its onset-peak-decline cycle. Three stages of the Cold Pool event are defined according to its evolution and characteristics. The Cold Pool cores travel along the 60-m isobath starting south of the New England shelf to the Hudson Shelf Valley at a speed of 2–3 cm/s. Furthermore, the northern extent of the Cold Pool retreats about 2.6 times faster than the southern extent during the summer progression. The heat balance of near-bottom waters over the MAB and Georges Bank is computed and it is found that the heat advection, rather than vertical diffusion, dominates the resulting spatial patterns of warming. Possible origins of the Cold Pool are investigated by performing a lead-lag correlation analysis. Results suggest that the Cold Pool originates not only from local remnants of winter water near the Nantucket Shoals, but has an upstream source traveling in the spring time from the southwestern flank of the Georges Bank along the 80-m isobath. Plain Language Summary The Mid-Atlantic Bight (MAB) Cold Pool is a bottom-trapped relatively cold and fresh water mass over the middle and outer continental shelf. It is a seasonal thermal feature that emerges during spring and summer when the water column is warmer at the surface. We use three criteria to quantify the Cold Pool and investigate its seasonal evolution of properties. We find the Cold Pool typically experiences an onset-peak-decline cycle during a year. Its coldest part travels along the 60-m isobath at a speed of 2–3 cm/s from the south of the Nantucket Shoals to the Hudson Shelf Valley. During its seasonal collapse, the northern and southern boundaries retreat at different speeds, with the northern boundary retreating 2.6 times faster. In order to investigate relative importance of vertical mixing and advection of heat, we build a heat balance of the water column below 30 m depth. Results suggest that vertical mixing is the main reason for the warming in the Cold Pool, however, horizontal and vertical advection of heat that regulates the spatial difference in warming rates of the Cold Pool. We further discuss the possible origins of the Cold Pool.
Identifying uncertain words within an utterance via prosodic features

We describe an experiment that investigates whether subutterance prosodic features can be used to detect uncertainty at the word-level. That is, given an utterance that is classified as uncertain, we want to determine which word or phrase the speaker is uncertain about. We have a corpus of utterances spoken under varying degrees of certainty. Using combinations of sub-utterance prosodic features we train models to predict the level of certainty of an utterance. On a set of utterances that were perceived to be uncertain, we compare the predictions of our models for two candidate ‘target word’ segmentations: (a) one with the actual word causing uncertainty as the proposed target word, and (b) one with a control word as the proposed target word. Our best model correctly identifies the word causing the uncertainty rather than the control word 91% of the time. Index Terms: prosody, spoken language understanding, uncertainty, emotion detection.
A Novel Method for Evaluating the Cardiotoxicity of Traditional Chinese Medicine Compatibility by Using Support Vector Machine Model Combined with Metabonomics

Traditional biochemical and histopathological tests have been used to evaluate the safety of traditional Chinese medicine (TCM) compatibility for a long time. But these methods lack high sensitivity and specificity. In the previous study, we have found ten biomarkers related to cardiotoxicity and established a support vector machine (SVM) prediction model. Results showed a good sensitivity and specificity. Therefore, in this study, we used SVM model combined with metabonomics UPLC/Q-TOF-MS technology to build a rapid and sensitivity and specificity method to predict the cardiotoxicity of TCM compatibility. This study firstly applied SVM model to the prediction of cardiotoxicity in TCM compatibility containing Aconiti Lateralis Radix Praeparata and further identified whether the cardiotoxicity increased after Aconiti Lateralis Radix Praeparata combined with other TCM. This study provides a new idea for studying the evaluation of the cardiotoxicity caused by compatibility of TCM.
Serum Malondialdehyde Concentration and Glutathione Peroxidase Activity in a Longitudinal Study of Gestational Diabetes

Aims The main goal of this study was to evaluate the presence of oxidative damage and to quantify its level in gestational diabetes. Methods Thirty-six healthy women and thirty-six women with gestational diabetes were studied in the three trimesters of pregnancy regarding their levels of oxidative stress markers. These women were diagnosed with diabetes in the second trimester of pregnancy. Blood glucose levels after 100g glucose tolerance test were higher than 190, 165 or 145 mg/dl, 1, 2 or 3 hours after glucose intake. Results The group of women with gestational diabetes had higher serum malondialdehyde levels, with significant differences between groups in the first and second trimester. The mean values of serum glutathione peroxidase activity in the diabetic women were significantly lower in the first trimester. In the group of women with gestational diabetes there was a negative linear correlation between serum malondialdehyde concentration and glutathione peroxidase activity in the second and third trimester. Conclusions In this observational and longitudinal study in pregnant women, the alterations attributable to oxidative stress were present before the biochemical detection of the HbA1c increase. Usual recommendations once GD is detected (adequate metabolic control, as well as any other normally proposed to these patients) lowered the concentration of malondialdehyde at the end of pregnancy to the same levels of the healthy controls. Serum glutathione peroxidase activity in women with gestational diabetes increased during the gestational period.
Current approach to diagnosis and treatment of delirium after cardiac surgery

Delirium after cardiac surgery remains a common occurrence that results in significant short- and long-term morbidity and mortality. It continues to be underdiagnosed given its complex presentation and multifactorial etiology; however, its prevalence is increasing given the aging cardiac surgical population. This review highlights the perioperative risk factors, tools to assist in diagnosing delirium, and current pharmacological and nonpharmacological therapy options.
Changes in Diapered and Nondiapered Infant Skin Over the First Month of Life

Abstract: Time‐ and site‐dependent differences in epidermal barrier properties were investigated over the first 28 days of life in healthy term newborn infants. Diapered and nondiapered skin sites were contrasted to the volar forearm of adults (mothers). Thirty‐one term infants were evaluated in the hospital on postnatal day 1 and at home on days 4, 7, 14, 21, and 28 for a total of six visits. Measurements included baseline skin hydration, continuous capacitive reactance, peak water sorption, rate of water desorption, skin pH, skin temperature, and environmental conditions. Changes in epidermal barrier properties over the first 4 weeks of life included an increase in surface hydration, a decrease in transepidermal water movement under occlusion, a decrease in surface water desorption rate, and a decrease in surface pH. Diapered and nondiapered regions were indistinguishable at birth but exhibited differential behavior over the first 14 days, with the diapered region showing a higher pH and increased hydration. Maternal measurements remained constant throughout the period. We conclude that healthy newborn skin undergoes progressive changes in epidermal barrier properties over the first 28 days. Adult skin testing does not replicate newborn skin during the first month of life.