Miracle-dz/UniFAR-FTUs huggingface dataset:
Cauchy-Schwarz divergence-based distributed fusion with poisson random finite sets

This paper presents a new approach towards statistical fusion of multi-source information. Our solution is formulated in the context of fusing the Poisson finite random set posteriors returned by multiple local PHD filters at sensor nodes of a distributed multi-sensor multi-object estimation system. The most common measure used for information gain in stochastic multi-source information fusion is Kullback-Leibler divergence (KLD) which leads to the well-known Generalised Covariance Intersection (GCI) rule for sensor fusion. We present the idea of using Cauchy-Schwarz divergence instead of KLD and derive a closed-form solution for fusion of multiple Poisson posteriors. Simulation results show that our method performs favourably against GCI fusion rule in terms of overall tracking performance.
Adapting and Implementing Open Dialogue in the Scandinavian Countries: A Scoping Review

abstract Open Dialogue is a resource-oriented mental health approach, which mobilises a crisis-struck person's psychosocial network resources. This scoping review 1) identifies the range and nature of literature on the adoption of Open Dialogue in Scandinavia in places other than the original sites in Finland, and 2) summarises this literature. We included 33 publications. Most studies in this scoping review were published as “grey” literature and most grappled with how to implement Open Dialogue faithfully. In the Scandinavian research context, Open Dialogue was mainly described as a promising and favourable approach to mental health care.
Circulatory Arrest, Brain Arrest and Death Determination

Technological advances, particularly in the capacity to support, replace or transplant failing organs, continue to challenge and refine our understanding of human death. Given the ability to reanimate organs before and after death, both inside and outside of the body, through reinstitution of oxygenated circulation, concepts related to death of organs (e.g. cardiac death) are no longer valid. This paper advances the rationale for a single conceptual determination of death related to permanent brain arrest, resulting from primary brain injury or secondary to circulatory arrest. The clinical characteristics of brain arrest are the permanent loss of capacity for consciousness and loss of all brainstem functions. In the setting of circulatory arrest, death occurs after the arrest of circulation to the brain rather than death of the heart. Correspondingly, any intervention that resumes oxygenated circulation to the brain after circulatory arrest would invalidate the determination of death.
Self-Guided Psychological Treatment for Depressive Symptoms: A Meta-Analysis

Background A number of trials have examined the effects of self-guided psychological intervention, without any contact between the participants and a therapist or coach. The results and sizes of these trials have been mixed. This is the first quantitative meta-analysis, aimed at organizing and evaluating the literature, and estimating effect size. Method We conducted systematic literature searches in PubMed, PsycINFO and Embase up to January 2010, and identified additional studies through earlier meta-analyses, and the references of included studies. We identified seven randomized controlled trials that met our inclusion criteria, with a total of 1,362 respondents. The overall quality of the studies was high. A post-hoc power calculation showed that the studies had sufficient statistical power to detect an effect size of d = 0.19. Results The overall mean effect size indicating the difference between self-guided psychological treatment and control groups at post-test was d = 0.28 (p<0.001), which corresponds to a NNT of 6.41. At 4 to 12 months follow-up the effect size was d = 0.23. There was no indication for significant publication bias. Conclusions We found evidence that self-guided psychological treatment has a small but significant effect on participants with increased levels of depressive symptomatology.
CuLDA_CGS: solving large-scale LDA problems on GPUs

GPUs have benefited many ML algorithms. However, we observe that the performance of existing Latent Dirichlet Allocation(LDA) solutions on GPUs are not satisfying. We present CuLDA_CGS, an efficient approach to accelerate large-scale LDA problems. We delicately design workload partition and synchronization mechanism to exploit multiple GPUs. We also optimize the algorithm from the sampling algorithm, parallelization, and data compression perspectives. Experiment evaluations show that compared with the state-of-the-art LDA solutions, CuLDA_CGS outperforms them by a large margin (up to 7.3X) on a single GPU.
Pre-operative Prediction of Difficult Laparoscopic Cholecystectomy.

INTRODUCTION Laparoscopic cholecystectomy is one of the most common operation performed. Though LC have become safer and easier at times it can be difficult. Difficult cases can result in prolonged operative time, bleeding, bile spillage, conversion to open technique and bile duct injury resulting in unplanned prolonged hospital stay, increase in estimated cost to the patients and for the surgeon it leads to increased stress during operation and time pressure to complete the operative list. Identification of difficult cases has potential advantages for surgeons, patients and their relatives. We aim to develop and validate a scoring system to predict difficult LC preoperatively. METHODS Prospective study. History, physical examination, abdominal ultrasound and biochemical parameters were included to develop a scoring system. Hundred patients undergoing LC were included and preoperative scores were calculated preoperatively to predict difficult LC which was compared with operative assessment. RESULTS Sensitivity and specificity of the preoperative scoring for difficult case was 53.8 % and 89.2 % respectively with PPV of 63.64 % and NPV of 84.62%. Only three parameters (history of acute cholecystitis, gall bladder wall thickness and contracted gall bladder) were statistically significant to predict difficult LC individually. Area under ROC curve was 0.779 (95 % CI, 0.657-0.883). CONCLUSIONS Preoperative scoring system can be used to predict difficult LC. Surgeons can plan operation based on predicted difficulty. Patients and relatives can be counselled preoperatively for the possibility of difficult operation, prolonged hospital stay and increased cost in predicted difficult case.
Age-based normative data for a computerized dynamic posturography system that uses a virtual visual surround environment

Abstract Background: Computerized dynamic posturography (CDP) is the gold standard to differentiate between sensory, motor, and central adaptive impairments to postural control. Objective: To obtain normative values in healthy adults age 20–69 for a CDP system that uses a full-field dynamic visual surround. This is in contrast to the mechanically movable visual surround used in traditional CDP systems. Methods: Fifty healthy adults divided into five age groups were tested during the three test protocols for CDP: sensory organization test (SOT), motor control test (MCT), and adaptation test (ADT). Outcomes were compared across age groups and to published normative CDP values. Repeatability was assessed in five different subjects (23–30 years old) on 2 days, 1 week apart. Results: Most outcomes were comparable to published norms with notable differences in SOT condition 4 and ADT. SOT composite and conditions 4–6, all MCT translations, and ADT toes up showed moderate to good repeatability (r = 0.60 to 0.99). Age group and gender differences were not substantial. Conclusions: Some but not all CDP outcomes with a virtual visual environment were comparable to published norms. The differences are likely related to the virtual surround having a more compelling effect on balance even in conditions with a stationary surround.
The complete mitochondrial genome sequence of the wild Huoba Tibetan sheep of the Qinghai-Tibetan Plateau in China

Abstract The wild Huoba Tibetan sheep belongs to the subfamily Caprinae, which distributes in Huoba Town of Tibet Autonomous Region, China. In the present work, we report the complete mitochondrial genome sequence of wild Huoba Tibetan sheep for the first time. The total length of the mitogenome is 16 621 bp, consisting of 13 protein-coding genes, 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a non-coding control region (D-loop region). As in other mammals, most mitochondrial genes are encoded on the heavy strand. Its overall base composition is A: 33.64%, T: 27.32%, C: 25.90%, and G: 13.14%, A + T (61.96%) was higher than G + C (39.04%). The phylogenetic relationships was analyzed using the complete mitogenome sequence, results show that wild Huoba Tibetan sheep should be a different species differ from the Ovis aries. These information provide an important data for further study on protection of genetic resources and the taxonomy of Caprinae.
Three New Structures of Left-Handed RadA Helical Filaments: Structural Flexibility of N-Terminal Domain Is Critical for Recombinase Activity

RecA family proteins, including bacterial RecA, archaeal RadA, and eukaryotic Dmc1 and Rad51, mediate homologous recombination, a reaction essential for maintaining genome integrity. In the presence of ATP, these proteins bind a single-strand DNA to form a right-handed nucleoprotein filament, which catalyzes pairing and strand exchange with a homologous double-stranded DNA (dsDNA), by as-yet unknown mechanisms. We recently reported a structure of RadA left-handed helical filament, and here present three new structures of RadA left-handed helical filaments. Comparative structural analysis between different RadA/Rad51 helical filaments reveals that the N-terminal domain (NTD) of RadA/Rad51, implicated in dsDNA binding, is highly flexible. We identify a hinge region between NTD and polymerization motif as responsible for rigid body movement of NTD. Mutant analysis further confirms that structural flexibility of NTD is essential for RadA's recombinase activity. These results support our previous hypothesis that ATP-dependent axial rotation of RadA nucleoprotein helical filament promotes homologous recombination.
What next after basal insulin? Treatment intensification with lixisenatide in Asian patients with type 2 diabetes mellitus

There is increasing evidence that the pathophysiology of type 2 diabetes mellitus (T2DM) in Asian patients differs from that in Western patients, with early phase insulin deficiencies, increased postprandial glucose excursions, and increased sensitivity to insulin. Asian patients may also experience higher rates of gastrointestinal adverse events associated with glucagon‐like peptide‐1 receptor agonists (GLP‐1RAs), such as nausea and vomiting, compared with their Western counterparts. These factors should be taken into consideration when selecting therapy for basal insulin treatment intensification in Asian patients. However, the majority of studies to establish various agents for treatment intensification in T2DM have been conducted in predominantly Western populations, and the levels of evidence available in Chinese or Asian patients are limited. This review discusses the different mechanisms of action of short‐acting, prandial, and long‐acting GLP‐1RAs in addressing hyperglycemia, and describes the rationale and available clinical data for basal insulin in combination with the short‐acting prandial GLP‐1RA lixisenatide, with a focus on treatment of Asian patients with T2DM.
Adolescents: Contraceptive Knowledge and Use, a Brazilian Study

The purpose of this study was to identify the knowledge and use of contraceptive methods by female adolescent students. The study was cross-sectional and quantitative, using a semi-structured questionnaire that was administered to 12- to 19-year-old female students in Maceió, Brazil. A representative and randomized sample was calculated, taking into account the number of hospital admissions for curettage. This study was approved by the Human Research Ethics Committee, and Epi InfoTM software was used for data and result evaluation using the mean and chi-square statistical test. Our results show that the majority of students know of some contraceptive methods (95.5%), with the barrier/hormonal methods being the most mentioned (72.4%). Abortion and aborting drugs were inaccurately described as contraceptives, and 37.9% of the sexually active girls did not make use of any method. The barrier methods were the most used (35.85%). A significant association was found in the total sample (2,592) between pregnancy and the use of any contraceptive method. This association was not found, however, in the group having an active sexual life (559). The study points to a knowledge of contraceptive methods, especially by teenagers who have already been pregnant, but contraceptives were not adequately used. The low use of chemical methods of contraception brings the risk of pregnancy. Since abortion and aborting drugs were incorrectly cited as contraceptive methods, this implies a nonpreventive attitude towards pregnancy.
Seasonality of nitrogen partitioning (non-structural vs structural) in the leaves and woody tissues of tropical eucalypts experiencing a marked dry season

Numerous studies have shown that internal nitrogen (N) translocation in temperate tree species is governed by photoperiod duration and temperature. For tropical tree species, the seasonality of rainfall is known to affect growth and foliage production, suggesting that efficient internal N recycling also occurs throughout the year. We tested this hypothesis by comparing the N budgets and N partitioning (non-structural vs structural N) in the different organs of 7-year-old Eucalyptus urophylla (S.T. Blake) × E. grandis (W. Hill ex Maiden) trees from a plantation in coastal Congo on poor sandy soil. The trees were sampled at the end of the dry season and late in the rainy season. Lower N concentrations and N investment in the non-structural fraction were observed in leaves during the dry season, which indicates resorption of non-structural N from senescing leaves. Stem wood, which contributes to about 60% of the total biomass of the trees, accumulated high amounts of non-structural N at the end of the dry season, most of which was remobilized during the following rainy season. These results support the hypothesis of efficient internal N recycling, which may be an important determinant for the growth potential of eucalypts on N-poor soils. Harvesting trees late in the rainy season when stem wood is depleted in non-structural N should be recommended to limit the export of nutrients off-site and to improve the sustainability of tropical eucalypt plantations.
Bloch Waves in an Arbitrary Two-Dimensional Lattice of Subwavelength Dirichlet Scatterers

We study waves governed by the planar Helmholtz equation, propagating in an infinite lattice of subwavelength Dirichlet scatterers, the periodicity being comparable to the wavelength. Applying the method of matched asymptotic expansions, the scatterers are effectively replaced by asymptotic point constraints. The resulting coarse-grained Bloch-wave dispersion problem is solved by a generalised Fourier series, whose singular asymptotics in the vicinities of scatterers yield the dispersion relation governing modes that are strongly perturbed from plane-wave solutions existing in the absence of the scatterers; there are also empty-lattice waves that are only weakly perturbed. Characterising the latter is useful in interpreting and potentially designing the dispersion diagrams of such lattices. The method presented, that simplifies and expands on Krynkin & McIver [Waves Random Complex, 19 347 2009], could be applied in the future to study more sophisticated designs entailing resonant subwavelength elements distributed over a lattice with periodicity on the order of the operating wavelength.
25(OH)D levels in trained versus sedentary university students at 64° north

ABSTRACT Purpose: 25-hydroxyvitamin D (25[OH]D) deficiency is associated with compromised bone mineralisation, fatigue, suppressed immune function and unsatisfactory skeletal muscle recovery. We investigated the risk of 25(OH)D insufficiency or deficiency in endurance athletes compared to sedentary non-athletes living at 64° north. Methods: University student-athletes (TS) and sedentary students (SS) volunteered to participate in this study. TS engaged in regular exercise while SS exercised no more than 20 minutes/week. Metabolic Equivalent of Task (MET) scores for participants were determined. Vitamin D intake was assessed using the National Cancer Institute’s 24-hour food recall (ASA24). Fasting plasma 25(OH)D levels were quantified via enzyme-linked immunosorbent assay. Results: TS reported higher activity levels than SS as assessed with MET-minutes/week and ranking of physical activity levels (p < 0.05). The reported mean daily intake of vitamin D was higher in TS compared to SS (p < 0.05) while 25(OH)D plasma levels were lower in TS than in SS (p < 0.05). In total, 43.8% of the TS were either insufficient (31.3%) or deficient (12.5%) in 25(OH)D, while none of the SS were insufficient and 13.3% were deficient. Conclusion: TS are at increased risk of 25(OH)D insufficiency or deficiency compared to their sedentary counterparts residing at the same latitude, despite higher vitamin D intake.
Simultaneous Estimation of Risk and Time Preferences Among Small‐Scale Cattle Farmers in West Africa

This study investigates risk and time preferences of small-holder cattle farmers in West Africa. We apply a discounted utility model and jointly estimate a prospect theory-based utility function and a quasi-hyperbolic discounting function using a maximum likelihood method. Results show that West African farmers are less loss-averse and are more patient than suggested by comparable studies in Asian developing countries. The main factors influencing farmers' risk and time preferences are cattle herd size and net revenue from sales of cattle products.
Dynamics of Nearby Groups of Galaxies: the role of the cosmological constant

(context) Different cosmological data are consistent with an accelerated expansion produced by an exotic matter-energy component, dubbed "dark-energy''. A cosmological constant is a possibility since it satisfies most of the observational constraints. (aims) In this work, the consequences of such a component in the dynamics of groups of galaxies is investigated, aiming to detect possible effects in scales of the order of few Mpc. (methods) The Lemaitre-Tolman model was modified by the inclusion of the cosmological constant term and, from the numerical solution of the equations of motion, a velocity-distance relation was obtained. This relation depends on two parameters: the central core mass and the Hubble parameter. The non-linear fit of such a relation to available data permitted to obtain masses for five nearby groups of galaxies and for the Virgo cluster as well as estimates of the Hubble constant. (results) The analysis of the present results indicates that the velocity-distance relation derived from the modified Lemaitre-Tolman model as well as that derived from the "canonical'' model give equally acceptable fits to the existent data. As a consequence, any robust conclusion on the effects of the cosmological constant in the dynamics of groups could be established. The mean value of the Hubble parameter derived from the present study of local flows is H_0 = 65\pm 7 km/s/Mpc.
Cardiovascular outcomes trial with anacetrapib in subjects with high cardiovascular risk – are major benefits REVEALed?

ABSTRACT Introduction: The actions of the cholesteryl ester transfer protein (CETP) inhibitors (torcetrapib, dalcetrapib and evacetrapib) include increasing high-density lipoprotein (HDL) cholesterol, but they do not reduce cardiovascular outcomes in subjects with high cardiovascular risk. Anacetrapib also inhibits CETP, increases HDL cholesterol and lowers low-density lipoprotein (LDL) cholesterol. Areas covered: This evaluation is of the REVEAL (Randomized Evaluation of the Effects of Anacetrapib through Lipid Modification) trial, which was a cardiovascular outcomes trial with anacetrapib in subjects with high cardiovascular risk. Consideration is given as to whether increasing HDL cholesterol, lowering LDL cholesterol or other mechanisms/factors underlying the positive outcome with this CETP inhibitor. Expert opinion: After three years, the REVEAL trial with anacetrapib, demonstrated cardiovascular benefits, but not a reduction in coronary artery deaths. The reductions were not significant in years one and two. Thus, in my opinion, the benefits of anacetrapib were not major, and may not apply in ‘real’ world populations where adherence to medicines is lower than in REVEAL. Also, lowering LDL cholesterol and off-target mechanisms of anacetrapib may have contributed to any beneficial and/or toxic effects. Anacetrapib has a good safety profile.
Distinct Microbial Limitations in Litter and Underlying Soil Revealed by Carbon and Nutrient Fertilization in a Tropical Rainforest

Human-caused alterations of the carbon and nutrient cycles are expected to impact tropical ecosystems in the near future. Here we evaluated how a combined change in carbon (C), nitrogen (N) and phosphorus (P) availability affects soil and litter microbial respiration and litter decomposition in an undisturbed Amazonian rainforest in French Guiana. In a fully factorial C (as cellulose), N (as urea), and P (as phosphate) fertilization experiment we analyzed a total of 540 litterbag-soil pairs after a 158-day exposure in the field. Rates of substrate-induced respiration (SIR) measured in litter and litter mass loss were similarly affected by fertilization showing the strongest stimulation when N and P were added simultaneously. The stimulating NP effect on litter SIR increased considerably with increasing initial dissolved organic carbon (DOC) concentrations in litter, suggesting that the combined availability of N, P, and a labile C source has a particularly strong effect on microbial activity. Cellulose fertilization, however, did not further stimulate the NP effect. In contrast to litter SIR and litter mass loss, soil SIR was reduced with N fertilization and showed only a positive effect in response to P fertilization that was further enhanced with additional C fertilization. Our data suggest that increased nutrient enrichment in the studied Amazonian rainforest can considerably change microbial activity and litter decomposition, and that these effects differ between the litter layer and the underlying soil. Any resulting change in relative C and nutrient fluxes between the litter layer and the soil can have important consequences for biogeochemical cycles in tropical forest ecosystems.