Miracle-dz/UniFAR-FTUs huggingface dataset:
Alcohol’s Effects on the Risk for Coronary Heart Disease

Several studies have indicated that moderate drinkers have a lower risk of both nonfatal myocardial infarction and fatal heart disease than do abstainers. To determine whether alcohol truly prevents coronary heart disease or whether other factors may contribute to this observed relationship, researchers conducted a systematic literature review and a combined analysis (i.e., meta-analysis) of 42 published studies. This analysis found that consumption of up to two drinks per day can promote changes in the levels of molecules that reduce the risk of heart disease while also increasing the levels of certain molecules that promote heart disease. Alcohol also may affect the risk of heart disease by acting on other various other molecules involved in a variety of physiological processes related to heart disease. Finally, the relationship between alcohol consumption and heart disease may be modulated by genetic factors.
Characterization of Interlayer Sliding Deformation for Individual Multiwalled Carbon Nanotubes Using Electrostatically Actuated Nanotensile Testing Device

We have developed an in situ scanning electron microscopy (SEM) nanomaterial manipulation system, including a newly designed electrostatically actuated nanotensile testing device (EANAT), in order to investigate the mechanical characteristics of multiwalled carbon nanotubes (MWCNTs) synthesized by atmospheric pressure-chemical vapor deposition. The new EANAT can measure uniaxial tensile displacement of nanomaterials using a capacitive displacement sensor incorporated into a cantilever motion amplification system. The resolution of the measurement displacement was 0.28 nm at the minimum. The nanomaterial manipulation system allows for an individual MWCNT to be picked up from a substrate and to be attached to an EANAT. The stress-strain relationships for the individual MWCNTs were successfully obtained from the nanotensile tests, and Young's moduli were estimated to be in the range from 338 to 623 GPa. The deformation of individual MWCNTs under uniaxial loading was accompanied by repeated stick-slip and hard sticking events like telescopic motion. The shear strength at a stick-slip event during interlayer sliding of MWCNTs under tensile loading was directly derived from the shear interaction force in the tensile load-displacement curves and SEM observations. On the basis of the single-shot extraction model, the shear strength was estimated to be an average of 78 MPa greater than that for high-quality crystalline graphite, which might be caused by the hard sticking between layers.
Multiple Origins of Elytral Reticulation Modifications in the West Palearctic Agabus bipustulatus Complex (Coleoptera, Dytiscidae)

The Agabus bipustulatus complex includes one of Europe's most widely distributed and common diving beetles. This complex, which is known for its large morphological variation, has a complex demographic and altitudinal variation in elytral reticulation. The various depth of the reticulation imprint, both in smaller and larger meshes, results in both mat and shiny individuals, as well as intermediate forms. The West Palearctic lowland is inhabited by a sexually dimorphic form, with shiny males and mat females. In mountain regions, shiny individuals of both sexes are found intermixed with mat individuals or in pure populations in central and southern areas, whereas pure populations of mat individuals are exclusively found in the northern region at high altitude. Sexual selection is proposed as a driving force in shaping this variation. However, the occurrence of different types of reticulation in both sexes and disjunct geographical distribution patterns suggest an additional function of the reticulation. Here we investigate the phylogeographical history, genetic structure and reticulation variation of several named forms within the Agabus bipustulatus complex including A. nevadensis. The molecular analyses recognised several well-supported clades within the complex. Several of the named forms had two or more independent origins. Few south European populations were uniform in reticulation patterns, and the males were found to display large variation. Reticulation diversity and population genetic variability were clearly correlated to altitude, but no genetic differences were detected among populations with mixed or homogenous forms. Observed reduction in secondary reticulation in female and increased variance in male at high altitude in South Europe may be explained by the occurrence of an additional selective force, beside sexual selection. The combined effect of these selective processes is here demonstrated in an extreme case to generate isolation barriers between populations at high altitudes. Here we discuss this selective force in relation to thermal selection.
Machine learning-based jamming detection for IEEE 802.11: Design and experimental evaluation

Jamming is a well-known reliability threat for mass-market wireless networks. With the rise of safety-critical applications this is likely to become a constraining issue in the future. Thus, the design of accurate jamming detection algorithms becomes important to react to ongoing jamming attacks. With respect to experimental work, jamming detection has been mainly studied for sensor networks. However, many safety-critical applications are also likely to run over 802.11-based networks where the proposed approaches do not carry over. In this paper we present a jamming detection approach for 802.11 networks. It uses metrics that are accessible through standard device drivers and performs detection via machine learning. While it allows for stand-alone operation, it also enables cooperative detection. We experimentally show that our approach achieves remarkably high detection rates in indoor and mobile outdoor scenarios even under challenging link conditions.
Fat Tissue Accretion in Children and Adolescents: Interplay between Food Responsiveness, Gender, and the Home Availability of Snacks

The appetitive trait “food responsiveness” is assumed to be a risk factor for adiposity gain primarily in obesogenic environments. So far, the reported results are inconsistent in school-aged children, possibly because these studies did not take into account important moderators such as gender and the food-environment. In order to better inform caregivers, clinicians and the developers of targeted obesity-prevention interventions on the conditions in which food responsiveness precedes adiposity gain, the current study investigated if this relationship is stronger in girls and in children exposed to a higher home availability of energy-dense snacks. Age- and sex-independent Fat and Lean Mass Index z-scores were computed based on air-displacement plethysmography at baseline and after 2 years in a community sample of 129 children (48.8% boys) aged 7.5–14 years at baseline. Parents reported at baseline on children's food responsiveness and the home availability of energy-dense snacks. Food responsiveness was a significant predictor of increases in Fat Mass Index z-scores over 2 years in girls but not boys. The home availability of energy-dense snacks did not significantly moderate the relation of food responsiveness with Fat Mass Index z-score changes. The results suggest that food responsiveness precedes accelerated fat tissue accretion in girls, and may inform targeted obesity-prevention interventions. Further, future research should investigate to which food-environmental parameters children high in food responsiveness mainly respond.
Optimal Calibration in Immunoassay and Inference on the Coefficient of Variation

This thesis examines and develops statistical methods for design and analysis with applications in immunoassay and other analytical techniques. In immunoassay, concentrations of components in clinical samples are measured using antibodies. The responses obtained are related to the concentrations in the samples. The relationship between response and concentration is established by fitting a calibration curve to responses of samples with known concentrations, called calibrators or standards. The concentrations in the clinical samples are estimated, through the calibration curve, by inverse prediction. The optimal choice of calibrator concentrations is dependent on the true relationship between response and concentration. A locally optimal design is conditioned on a given true relationship. This thesis presents a novel method that accounts for the variation in the true relationships by considering unconditional variances and expected values. For immunoassay, it is suggested that the average coefficient of variation in inverse predictions be minimised. In immunoassay, the coefficient of variation is the most common measure of variability. Several clinical samples or calibrators may share the same coefficient of variation, although they have different expected values. It is shown here that this phenomenon can be a consequence of a random variation in the dispensed volumes, and that inverse regression is appropriate when the random variation is in concentration rather than in response. An estimator of a common coefficient of variation that is shared by several clinical samples is proposed, and inferential methods are developed for common coefficients of variation in normally distributed data. These methods are based on McKay's chi-square approximation for the coefficient of variation. This study proves that McKay's approximation is noncentral beta distributed, and that it is asymptotically normal with mean n - 1 and variance slightly smaller than 2(n - 1).
Round window application of an active middle ear implant (AMEI) system in congenital oval window atresia

Abstract Conclusion: Application of the Vibrant Soundbridge to the round window (RW) membrane can be utilized as an efficient therapy for congenital oval window (OW) atresia. Objective: To report the surgical technique and auditory outcome of an active middle ear implant (AMEI) system used in patients with congenital OW atresia. Methods: Nine subjects with congenital OW atresia (six males and three females, ranging in age from 5.5 to 25 years, average 12.5 years) were implanted with an AMEI (Vibrant Soundbridge) at the round window (RW-Vibroplasty). Five cases were diagnosed as having isolated congenital OW atresia while four patients presented with combined external/middle ear malformation. Results: An improvement of 30 dB in average pure-tone air conduction thresholds (0.5–4 kHz) was achieved, with the high frequencies showing greater results. The subjects achieved postoperative speech recognition scores of 80–100% on the Computerized Mandarin Speech Test System (CMSTS) sentence test. Bone conduction thresholds were confirmed as stable in all subjects postoperatively. Decline in auditory benefit was noticed in two subjects, who then underwent revision surgery. One of these revision surgery patients then experienced stable hearing recovery, while the other patient’s hearing declined.
Six-color intravital two-photon imaging of brain tumors and their dynamic microenvironment

The majority of intravital studies on brain tumor in living animal so far rely on dual color imaging. We describe here a multiphoton imaging protocol to dynamically characterize the interactions between six cellular components in a living mouse. We applied this methodology to a clinically relevant glioblastoma multiforme (GBM) model designed in reporter mice with targeted cell populations labeled by fluorescent proteins of different colors. This model permitted us to make non-invasive longitudinal and multi-scale observations of cell-to-cell interactions. We provide examples of such 5D (x,y,z,t,color) images acquired on a daily basis from volumes of interest, covering most of the mouse parietal cortex at subcellular resolution. Spectral deconvolution allowed us to accurately separate each cell population as well as some components of the extracellular matrix. The technique represents a powerful tool for investigating how tumor progression is influenced by the interactions of tumor cells with host cells and the extracellular matrix micro-environment. It will be especially valuable for evaluating neuro-oncological drug efficacy and target specificity. The imaging protocol provided here can be easily translated to other mouse models of neuropathologies, and should also be of fundamental interest for investigations in other areas of systems biology.
STUDY OF THE KINETICS AND MECHANISMS OF THERMAL DECOMPOSITION OF MOROCCAN TARFAYA OIL SHALE AND ITS KEROGEN

In this research, thermal characteristics and kinetic parameters of Tarfaya oil shale and its kerogen samples were determined by thermogravimetry (TG/DTG) under non-isothermal heating conditions. The pyrolysis experiments were performed increasing the temperature up to 1273 K at heating rates of 2, 10, 20 and 50 K/min in an inert atmosphere of nitrogen. The mass loss curve showed that pyrolysis of kerogen took place mainly in the range of 433–873 K. At higher temperatures there was a significant mass loss due to decomposition of mineral matter. It has been found that for oil shale and its kerogen analysed using the TG/DTG, the increase in the heating rate shifts the maximum rate loss to a higher temperature. Kissinger-Akahira-Sunose, Friedman, FlynnWall-Ozawa and Coats–Redfern methods were used to determine the apparent activation energies of materials' degradation. The analyses of the process mechanism by the methods of Criado et al. and Coats-Redfern showed that the most probable model for the pyrolysis process of organic matter of oil shale agrees with the diffusion model (D4 mechanism), and the thermal degradation process of isolated kerogen corresponds to a mechanism involving a simple norder model (F1 mechanism). The apparent activation energies for the organic matter of oil shale and isolated kerogen were 80–87 and 69–76 kJ/mol, respectively. A single kinetic expression is valid over the temperature range of kerogen pyrolysis between 433 and 873 K. In addition, the results indicate that the removal of mineral matter affected the kinetics and mechanism established for kerogen in oil shale.
The Currency Union Effect on Trade: Early Evidence from Emu

In this paper we estimate the early effect of the European Monetary Union (EMU) on trade. We use a panel data set that includes the most recent information on bilateral trade for 22 developed countries from 1992 through 2002. During this period 12 European countries formally entered into a currency union. This is a unique event that allows us to study the effect of currency union among a relatively homogeneous group of industrial countries. Controlling for a host of other factors, we find that the effect of EMU on bilateral trade between member countries ranges between 5 and 10 percent, when compared to trade between all other pairs of countries, and between 9 and 20 percent, when compared to trade among non-EMU countries. In addition, we find no evidence of trade diversion. If anything, our results suggest that monetary union increases trade not just with EMU countries, but also with the rest of the world.
Lithospheric Architecture and Mantle Metasomatism Linked to Iron Oxide Cu‐Au Ore Formation: Multidisciplinary Evidence from the Olympic Dam Region, South Australia

The role of lithospheric architecture and the mantle in the genesis of iron oxide copper‐gold (IOCG) deposits is controversial. Using the example of the Precambrian Gawler Craton (South Australia), which hosts the giant Olympic Dam IOCG deposit, we integrate geophysical data (seismic tomography and magnetotellurics) with geological and geochemical data to develop a new interpretation of the lithospheric setting of these deposits. Spatially, IOCG deposits are located above the margin of a mantle lithospheric zone with anomalously high electrical conductivities (resistivity <10 ohm.m, top at ~100–150 km depth), low seismic shear‐wave velocities (horizontal component, Vsh < 4.6 km/s), and unusually high ratios of compressional‐ to shear‐wave velocities (Vp/Vsh > 1.80). The high conductivity cannot be explained by water‐bearing olivine‐rich rock alone. Relatively fertile and metasomatized peridotitic mantle with additional high‐Vp/Vs phases, for example, clinohumite, hydrous garnet, and/or phlogopite, could explain the anomalous velocity and conductivity. The top of this high‐Vp/Vsh zone marks a midlithospheric discontinuity at ~100–130 km depth that is interpreted to reflect locally orthopyroxene‐rich mantle. A sub‐Moho zone with high Vp/Vsh at ~40–80 km depth correlates spatially with primitive Nd isotope signatures and arc‐related ~1,620–1,610 Ma magmatism and is interpreted as the eclogitic root of a magmatic arc. Mafic volcanics contemporaneous with ~1,590 Ma IOCG mineralization have geochemistry suggesting derivation from subduction‐modified lithospheric mantle. We suggest that Olympic Dam formed inboard of a continental margin in a postsubduction setting, related to foundering of previously refertilized and metasomatized lithospheric mantle. Deposits formed during the switch from compression to extension, following delamination‐related uplift and exhumation.
Selectivity of Direct Methanol Fuel Cell Membranes

Sulfonic acid-functionalized polymer electrolyte membranes alternative to Nafion® were developed. These were hydrocarbon systems, such as blend sulfonated polyetheretherketone (s-PEEK), new generation perfluorosulfonic acid (PFSA) systems, and composite zirconium phosphate–PFSA polymers. The membranes varied in terms of composition, equivalent weight, thickness, and filler and were investigated with regard to their methanol permeation characteristics and proton conductivity for application in direct methanol fuel cells. The behavior of the membrane electrode assemblies (MEA) was investigated in fuel cell with the aim to individuate a correlation between membrane characteristics and their performance in a direct methanol fuel cell (DMFC). The power density of the DMFC at 60 °C increased according to a square root-like function of the membrane selectivity. This was defined as the reciprocal of the product between area specific resistance and crossover. The power density achieved at 60 °C for the most promising s-PEEK-based membrane-electrode assembly (MEA) was higher than the benchmark Nafion® 115-based MEA (77 mW·cm−2 vs. 64 mW·cm−2). This result was due to a lower methanol crossover (47 mA·cm−2 equivalent current density for s-PEEK vs. 120 mA·cm−2 for Nafion® 115 at 60 °C as recorded at OCV with 2 M methanol) and a suitable area specific resistance (0.15 Ohm cm2 for s-PEEK vs. 0.22 Ohm cm2 for Nafion® 115).
Human exonuclease 1 and BLM helicase interact to resect DNA and initiate DNA repair

The error-free repair of double-stranded DNA breaks by homologous recombination requires processing of broken ends. These processed ends are substrates for assembly of DNA strand exchange proteins that mediate DNA strand invasion. Here, we establish that human BLM helicase, a member of the RecQ family, stimulates the nucleolytic activity of human exonuclease 1 (hExo1), a 5′→3′ double-stranded DNA exonuclease. The stimulation is specific because other RecQ homologs fail to stimulate hExo1. Stimulation of DNA resection by hExo1 is independent of BLM helicase activity and is, instead, mediated by an interaction between the 2 proteins. Finally, we show that DNA ends resected by hExo1 and BLM are used by human Rad51, but not its yeast or bacterial counterparts, to promote homologous DNA pairing. This in vitro system recapitulates initial steps of homologous recombination and provides biochemical evidence for a role of BLM and Exo1 in the initiation of recombinational DNA repair.
Intestinal permeability, gut-bacterial dysbiosis, and behavioral markers of alcohol-dependence severity

Significance Alcohol-dependent subjects frequently develop emotional symptoms that contribute to the persistence of alcohol drinking. These subjects are also characterized by gastrointestinal disturbances. In this study, we showed that alcohol-dependent subjects with altered intestinal permeability had also altered gut-microbiota composition and activity and remained with high scores of depression, anxiety, and alcohol craving after a short-term detoxification program. These results are consistent with the existence of a gut–brain axis in alcohol dependence, in which the gut microbiota could alter the gut-barrier function and influence behavior in alcohol dependence. Therefore, this study opens a previously unidentified field of research for the treatment and the management of alcohol dependence, targeting the gut microbiota. Alcohol dependence has traditionally been considered a brain disorder. Alteration in the composition of the gut microbiota has recently been shown to be present in psychiatric disorders, which suggests the possibility of gut-to-brain interactions in the development of alcohol dependence. The aim of the present study was to explore whether changes in gut permeability are linked to gut-microbiota composition and activity in alcohol-dependent subjects. We also investigated whether gut dysfunction is associated with the psychological symptoms of alcohol dependence. Finally, we tested the reversibility of the biological and behavioral parameters after a short-term detoxification program. We found that some, but not all, alcohol-dependent subjects developed gut leakiness, which was associated with higher scores of depression, anxiety, and alcohol craving after 3 wk of abstinence, which may be important psychological factors of relapse. Moreover, subjects with increased gut permeability also had altered composition and activity of the gut microbiota. These results suggest the existence of a gut–brain axis in alcohol dependence, which implicates the gut microbiota as an actor in the gut barrier and in behavioral disorders. Thus, the gut microbiota seems to be a previously unidentified target in the management of alcohol dependence.
Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium)

Cotton is remarkable among our major crops in that four species were independently domesticated, two allopolyploids and two diploids. In each case thousands of years of human selection transformed sparsely flowering, perennial shrubs into highly productive crops with seeds bearing the vastly elongated and abundant single-celled hairs that comprise modern cotton fiber. The genetic underpinnings of these transformations are largely unknown, but comparative gene expression profiling experiments have demonstrated up-regulation of profilin accompanying domestication in all three species for which wild forms are known. Profilins are actin monomer binding proteins that are important in cytoskeletal dynamics and in cotton fiber elongation. We show that Gossypium diploids contain six profilin genes (GPRF1–GPRF6), located on four different chromosomes (eight chromosomes in the allopolyploid). All but one profilin (GPRF6) are expressed during cotton fiber development, and both homeologs of GPRF1–GPRF5 are expressed in fibers of the allopolyploids. Remarkably, quantitative RT-PCR and RNAseq data demonstrate that GPRF1–GPRF5 are all up-regulated, in parallel, in the three independently domesticated cottons in comparison with their wild counterparts. This result was additionally supported by iTRAQ proteomic data. In the allopolyploids, there This usage of novel should be fine, since it refers to a novel evolutionary process, not a novel discovery has been novel recruitment of the sixth profilin gene (GPRF6) as a result of domestication. This parallel up-regulation of an entire gene family in multiple species in response to strong directional selection is without precedent and suggests unwitting selection on one or more upstream transcription factors or other proteins that coordinately exercise control over profilin expression.