Miracle-dz/UniFAR-FTUs huggingface dataset:
Postural Compensation for Unilateral Vestibular Loss

Postural control of upright stance was investigated in well-compensated, unilateral vestibular loss (UVL) subjects compared to age-matched control subjects. The goal was to determine how sensory weighting for postural control in UVL subjects differed from control subjects, and how sensory weighting related to UVL subjects’ functional compensation, as assessed by standardized balance and dizziness questionnaires. Postural control mechanisms were identified using a model-based interpretation of medial–lateral center-of-mass body-sway evoked by support-surface rotational stimuli during eyes-closed stance. The surface-tilt stimuli consisted of continuous pseudorandom rotations presented at four different amplitudes. Parameters of a feedback control model were obtained that accounted for each subject’s sway response to the surface-tilt stimuli. Sensory weighting factors quantified the relative contributions to stance control of vestibular sensory information, signaling body-sway relative to earth-vertical, and proprioceptive information, signaling body-sway relative to the surface. Results showed that UVL subjects made significantly greater use of proprioceptive, and therefore less use of vestibular, orientation information on all tests. There was relatively little overlap in the distributions of sensory weights measured in UVL and control subjects, although UVL subjects varied widely in the amount they could use their remaining vestibular function. Increased reliance on proprioceptive information by UVL subjects was associated with their balance being more disturbed by the surface-tilt perturbations than control subjects, thus indicating a deficiency of balance control even in well-compensated UVL subjects. Furthermore, there was some tendency for UVL subjects who were less able to utilize remaining vestibular information to also indicate worse functional compensation on questionnaires.
Localized 13C NMR Spectroscopy in the Human Brain of Amino Acid Labeling from d‐[1‐13C]Glucose

Abstract: Cerebral metabolism of d[1‐13C]glucose was studied with localized 13C NMR spectroscopy during intravenous infusion of enriched [1‐13C]glucose in four healthy subjects. The use of three‐dimensional localization resulted in the complete elimination of triacylglycerol resonance that originated in scalp and subcutaneous fat. The sensitivity and resolution were sufficient to allow 4 min of time‐resolved observation of label incorporation into the C3 and C4 resonances of glutamate and C4 of glutamine, as well as C3 of aspartate with lower time resolution. [4‐13C]Glutamate labeled rapidly reaching close to maximum labeling at 60 min. The label flow into [3‐13C]glutamate clearly lagged behind that of [4‐13C]glutamate and peaked at t = 110–140 min. Multiplets due to homonuclear 13C‐13C coupling between the C3 and C4 peaks of the glutamate molecule were observed in vivo. Isotopomer analysis of spectra acquired between 120 and 180 min yielded a 13C isotopic fraction at C4 glutamate of 27 ± 2% (n = 4), which was slightly less than one‐half the enrichment of the C1 position of plasma glucose (63 ± 1%), p < 0.05. By comparison with an external standard the total amount of [4‐13C]glutamate was directly quantified to be 2.4 ± 0.1 µmol/ml‐brain. Together with the isotopomer data this gave a calculated brain glutamate concentration of 9.1 ± 0.7 µmol/ml, which agrees with previous estimates of total brain glutamate concentrations. The agreement suggests that essentially all of the brain glutamate is derived from glucose in healthy human brain.
Unusual general error locator polynomial for the (23, 12, 7) golay code

For algebraic decoding of the (23, 12, 7) Golay code, this letter proposes a new error locator polynomial, called the unusual general error locator polynomial, whose coefficients are expressed as a sum of powers of their previous ones. Because of this special property, the determination of such a polynomial can be terminated earlier, and the number of errors occurred can be recognized at the same time.
The Influences of Riparian Vegetation on Bank Failures of a Small Meadow-Type Meandering River

The outer banks of meadow-type meandering river bends in the source zone of the Yellow River are especially vulnerable to bank failure. This study aims to understand how vegetation affects bank stability and the mechanism of bank failure, especially via a prediction of the width of a collapsed block of small rivers through a proposed bank stability equilibrium as well as field sampling. Soil and vegetation properties were surveyed at four sites near the riverbank in 2013–2016. It was found that the failed blocks had, on average, a dimension of 0.865 m (width) by 0.817 m (thickness) by 2.228 m (length). The variability in the size of all the failed blocks was attributed predominantly to the roots of plants. Block thickness could be logarithmically predicted by root length at R2 ≥ 0.76. The block width predicted from the proposed equilibrium equation deviated from in situ measurements by approximately 22.1%, a discrepancy highly subject to the overestimation of root reinforcement using Wu’s model. By reducing the coefficient of Wu’s model from 1.2 to 0.85, the proposed equilibrium equation was reliable to predict the width of bank collapse. However, its applicability to other study areas needs to be verified in further studies.
Rapid screening of commercially available herbal products for the inhibition of major human hepatic cytochrome P450 enzymes using the N-in-one cocktail

Self-administration of complementary products concurrently with conventional medication is increasingly common. The potential for cytochrome P450 (CYP) inhibition requires investigation. The N-in-one assay with ten probe substrates for nine CYPs was used with human liver microsomes to investigate ten products. CYP inhibition was measured in a single liquid chromatography-tandem mass spectrometry (LC/MS-MS) analysis. Estimated IC50-values were determined for the extracts that produced significant inhibition (less than 100 μg ml−1). Inhibition of CYP2C19 by dong quai (IC50 = 13.7–14.3 μg ml−1 for the methanolic extract) and CYP2D6 by goldenseal (IC50 = 6.7 and 6.3 μg ml−1 for the aqueous and methanolic extracts, respectively), are of particular concern as the potential for adverse interactions is high. The inhibition of CYP2C8 by horsetail (IC50 = 93 μg ml−1 for the aqueous extract) requires further investigation, as the potential for concurrent use with products that require CYP2C8 for metabolism is significant. CYP3A4 inhibition varied depending on the probe reaction being monitored. The earlier reported findings of inhibition by black cohosh, goldenseal and gotu kola were confirmed. The present work has shown that the N-in-one cocktail is a rapid and reliable method that can be used as an initial screen to help prioritize products that require more detailed investigations and it can also be applied to monitor product variability.
Dialysis‐dependent renal failure at diagnosis continues to be associated with very poor outcome in multiple myeloma – response to Murphy et al

The study by Murphy et al supports the observation made by several groups regarding the benefit of the novel agents in both young and elderly patients affected by multiple myeloma (MM) (Kumar et al, 2008; Ludwig et al, 2008; Turesson et al, 2010; Pozzi et al, 2013). Their single institution data collected over 18 years in 262 patients shows an improvement in overall survival (OS) starting from 1995 with an OS not yet reached in the period 2007–2012, after the introduction of bortezomib in their clinical practice. However the study clearly highlights renal insufficiency as a very poor prognostic factor, with a median OS shorter than 1 year in patients requiring dialysis. In the past few years many attempts have been made to classify and stratify patients based on various refined biological characteristics, however, as clearly stated here, the clinical presentation, particularly organ damage, still represents a negative prognostic factor that not even modern medicine has been able to overcome. The introduction of the International Staging System Criteria (ISS) (Greipp et al, 2005) only indirectly takes renal function into account, while the Durie and Salmon Criteria differentiates stage ‘A’ and ‘B’ MM based on kidney damage (Durie & Salmon, 1975). However Durie-Salmon ‘B’ stage is based on a creatinine cut-off point of 177 lmol/l and it is unable to better differentiate between moderate and severe impairment of renal damage requiring dialysis. It is also unable to predict the response to the treatment and reversibility of the organ damage, between possibly transitory kidney impairment due to dehydration, hyperuricaemia and hypercalacemia, and cast nephropathy. In this subset of MM patients it would be beneficial to introduce further parameters in the staging system (i.e. glomerular filtrate; type of light chain) in order to better stratify the risks and prevent treatment-related toxicity. For this reason, ad hoc clinical trials for this group of patients are strongly needed (Haynes et al, 2012). Finally, the Murphy study highlights the selection of patients enrolled in clinical trials and the necessity to evaluate the survival in the population of every day clinical practice, together with the need to develop high resolution analysis from data collected by cancer registers. Moreover, early diagnosis, compared with late or misdiagnosis, especially for light chains MM, is mandatory to prevent severe organ damage.
Flexible multi-agent decision making under time pressure

Autonomous agents need considerable computational resources to perform rational decision making. These demands are even more severe when other agents are present in the environment. In these settings, the quality of an agent's alternative behaviors depends not only on the state of the environment, but also on the actions of other agents, which in turn depend on the others' beliefs about the world, their preferences, and further on the other agents' beliefs about others, and so on. The complexity becomes prohibitive when large number of agents are present and when decisions have to be made under time pressure. In this paper, we investigate strategies intended to tame the computational burden by using offline computation in conjunction with online reasoning. We investigate two approaches. First, we use rules compiled offline to constrain alternative actions considered during online reasoning. This method minimizes overhead, but is not sensitive to changes in real-time demands of the situation at hand. Second, we use performance profiles computed offline and the notion of urgency (i.e., the value of time) computed online to choose the amount of information to be included during online deliberation. This method can adjust to various levels of real-time demands, but incurs some overhead associated with iterative deepening. We test our framework with experiments in a simulated anti-air defense domain. The experiments show that both procedures are effective in reducing computation time while offering good performance under time pressure.
Membrane and cytoskeletal changes associated with IgE-mediated serotonin release from rat basophilic leukemia cells

Binding of antigen to IgE-receptor complexes on the surface of RBL-2H3 rat basophilic leukemia cells is the first event leading to the release of cellular serotonin, histamine, and other mediators of allergic, asthmatic, and inflammatory responses. We have used dinitrophenol- conjugated bovine serum albumin (DNP-BSA) as well as the fluorescent antigen, DNP-B-phycoerythrin, and the electron-dense antigen, DNP-BSA- gold, to investigate dynamic membrane and cytoskeletal events associated with the release of [3H]serotonin from anti-DNP-IgE-primed RBL-2H3 cells. These multivalent antigens bind rapidly to cell surface IgE-receptor complexes. Their distribution is initially uniform, but within 2 min DNP-BSA-gold is found in coated pits and is subsequently internalized. Antigen internalization occurs in the presence and absence of extracellular Ca2+. The F-actin content of the detergent- extracted cell matrices analyzed by SDS PAGE decreases during the first 10-30 s of antigen binding and then increases by 1 min to almost double the control levels. A rapid and sustained increase is also observed when total F-actin is quantified by flow cytometry after binding of rhodamine-phalloidin. The antigen-stimulated increase in F-actin coincides with (and may cause) the transformation of the cell surface from a finely microvillous to a highly folded or plicated topography. Other early membrane responses include increased cell spreading and a 2- 3-fold increase in the uptake of fluorescein-dextran by fluid pinocytosis. The surface and F-actin changes show the same dependence on DNP-protein concentration as stimulated [3H]serotonin release; and both the membrane responses and the release of mediators are terminated by the addition of the non-cross-linking monovalent ligand, DNP-lysine. These data indicate that the same antigen-stimulated transduction pathway controls both the membrane/cytoskeletal and secretory events. However, the membrane and actin responses to IgE-receptor cross-linking are independent of extracellular Ca2+ and are mimicked by phorbol myristate acetate, whereas ligand-dependent mediator release depends on extracellular Ca2+ and is mimicked by the Ca2+ ionophore A23187.
Transmission of Burkholderia cepacia Complex: Evidence for New Epidemic Clones Infecting Cystic Fibrosis Patients in Italy

ABSTRACT To analyze national prevalence, genomovar distribution, and epidemiology of the Burkholderia cepacia complex in Italy, 225 putative B. cepacia complex isolates were obtained from 225 cystic fibrosis (CF) patients attending 18 CF centers. The genomovar status of these isolates was determined by a polyphasic approach, which included whole-cell protein electrophoresis and recA restriction fragment length polymorphism (RFLP) analysis. Two approaches were used to genotype B. cepacia complex isolates: BOX-PCR fingerprinting and pulsed-field gel electrophoresis (PFGE) of genomic macrorestriction fragments. A total of 208 (92%) of 225 isolates belonged to the B. cepacia complex, with Burkholderia cenocepacia as the most prevalent species (61.1%). Clones delineated by PFGE were predominantly linked to a single center; in contrast, BOX-PCR clones were composed of isolates collected either from the same center or from different CF centers and comprised multiple PFGE clusters. Three BOX-PCR clones appeared of special interest. One clone was composed of 17 B. cenocepacia isolates belonging to recA RFLP type H. These isolates were collected from six centers and represented three PFGE clusters. The presence of insertion sequence IS1363 in all isolates and the comparison with PHDC reference isolates identified this clone as PHDC, an epidemic clone prominent in North American CF patients. The second clone included 22 isolates from eight centers and belonged to recA RFLP type AT. The genomovar status of strains with the latter RFLP type is not known. Most of these isolates belonged to four different PFGE clusters. Finally, a third clone comprised nine B. pyrrocinia isolates belonging to recA RFLP type Se13. They represented three PFGE clusters and were collected in three CF centers.
Evaluation of left atrial volume and function in systemic sclerosis patients using speckle tracking and real-time three-dimensional echocardiography

Objective: The aim of the present study was to evaluate left atrial (LA) volume and functions using real-time three-dimensional echocardiography (RT3DE) and speckle tracking in systemic sclerosis (SSc) patients. Methods: The study was designed as a cross-sectional observational study. We studied 41 consecutive SSc patients (38 females, mean age: 49.5±11.6 years) and 38 healthy controls (35 females, mean age: 48.5±10.8 years). Patients with evidence or history of cardiovascular disease and patients with risk factors as hypertension, diabetes and chronic renal failure were excluded from the study. All study subjects underwent standard echocardiography; LA speckle tracking and RT3DE was performed to assess LA volume and phasic functions. Differences between numeric variables were tested using the independent sample Student’s t-test or Mann-Whitney U test, where appropriate. Results: There were no significant differences between SSC patients and controls regarding left ventricular (LV) systolic functions and two-dimensional (2-D) atrial diameters. Presence of LV diastolic dysfunction (LVDD) was evaluated and graded according to recommendations of the American Society of Echocardiography. Accordingly, LVDD was observed to be significantly more frequent in SSc patients; 16 SSc patients (39%) and 5 controls (12.8%) were observed to have LVDD (p=0.007). With regard to results obtained from RT3DE, LA maximum, minimum, and before atrial contraction volumes were significantly higher (40.5±14.6 vs. 32.6±8.9, 15.5±8.4 vs. 9.9±3.5 and 28.7±11.7 vs. 21.4±7.0 mL respectively, p<0.05 for all), whereas LA active emptying fraction, LA total emptying fraction, LA expansion index, and passive emptying fraction values were significantly (47.1±12.0 vs. 52.9±10.1%, 62.8±10.5 vs. 69.5±6.7%, 187.5±76.0 vs. 246.6±96.0, 29.6±9.3 vs. 34.4±11.0% respectively, p<0.05 for all) in SSc patients than in controls. In addition, regarding results obtained from speckle tracking echocardiography, atrial peak-systolic longitudinal strain (e), early negative strain rate (SR), late negative SR, and peak positive SR values were observed to be significantly lower in SSc patients. Conclusion: LA volumes were significantly increased, and LA reservoir, conduit, and contractile functions were significantly impaired in SSc patients compared with controls. LA volume and functional analyses with RT3DE and speckle tracking may facilitate the recognition of subtle LA dysfunction in SSc patients.
PERMIAN TO LOWER CRETACEOUS PLATE TECTONICS AND ITS IMPACT ON THE TECTONO-STRATIGRAPHIC DEVELOPMENT OF THE WESTERN AUSTRALIAN MARGIN

The post-Lower Permian succession of the Perth Basin and Westralian Superbasin can be directly related to the plate tectonic evolution of the Gondwanan Super-continent. In the Late Permian to Albian the northern edge of Gondwana continued to break into microplates that migrated to the north and were accreted into what is today the southeastern Asia (Burma–China) region. These separation events are recorded as a series of stratigraphically distinct transgressions (corresponding to the initial stretching of the asthenosphere and acceleration of subsidence rates) followed by rapid regressions (when new oceanic crust was emplaced in thinned continental crust causing uplifts of large continental masses). Because the events are synchronous across large regions, and may be identified from specific log and seismic signatures, the intensity of stratigraphically related transgressive/regressive cycles varies, depending on the distance from the break-up centres and these cycles allow the identification of regionally significant megasequences even in undrilled areas. The tectonic evolution and resulting stratigraphy can be described by eight plate tectonic events: Visean (Carboniferous) break-up of the southeastern Asia (Simao, Indochina and South China); Kungurian (uppermost Early Permian) break-up of Qiangtang and Sibumasu; Lowermost Norian uplift due to Bowen Orogeny in eastern Australia; Hettangian break-up of Mangkalihat (northeastern Borneo); Oxfordian break-up of Argo/West Burma, and Sikuleh (Western Sumatra); Kimmeridgian break-up of the West Sulawesi microplate; Tithonian break-up of Paternoster-Meratus (central Borneo); and Valanginian break-up of Greater India/India. These events should be identifiable in all Australian Phanerozoic basins and beyond, potentially providing a template for a synchronisation of the Permian to Early Cretaceous stratigraphy.
Electron distribution in iron octaethyloxophlorin complexes. Importance of the Fe(III) oxophlorin trianion form in the bis-pyridine and bis-imidazole complexes.

The apportionment of electrons between iron and the porphyrinic macrocycle in complexes of octaethyloxophlorin (H3OEPO) has been a vexing problem. In particular, for (Py)2Fe(OEPO), which is an important intermediate in heme degradation, three resonance structures involving Fe(III), Fe(II), or Fe(I), respectively, have been considered. To clarify this matter, the electronic and geometric structures of (Py)2Fe(III)(OEPO), (Im)2Fe(III)(OEPO). 2THF, and (Im)2Fe(III)(OEPO). 1.6CHCl3 have been examined by single-crystal X-ray diffraction, measurement of magnetic moments as a function of temperature, and EPR and NMR spectral studies. The results clearly show that both complexes exist in the Fe(III)/oxophlorin trianion form rather than the Fe(II)/oxophlorin radical form previously established for (2,6-xylylNC)(2)Fe(II)(OEPO.). In the solid state from 10 to 300 K, (Py)2Fe(III)(OEPO) exists in the high-spin (S = 5/2) state with the axial ligands in parallel planes, a planar porphyrin, and long axial Fe-N distances. However, in solution it exists predominantly in a low-spin (S = 1/2) form. In contrast, the structures of (Im)2Fe(III)(OEPO). 2THF and (Im)2Fe(III)(OEPO). 1.6CHCl3 consist of porphyrins with a severe ruffled distortion, axial ligands in nearly perpendicular planes, and relatively short axial Fe-N distances. The crystallographic, magnetic, EPR, and NMR results all indicate that (Im)2Fe(III)(OEPO) exists in the low-spin Fe(III) form in both the solid state and in solution.
Computing Moments of First Passage Times to a Subset of States in Markov Chains

This paper presents a relatively efficient and accurate method to compute the moments of first passage times to a subset of states in finite ergodic Markov chains. With the proposed method, the moment computation problem is reduced to the solution of a linear system of equations with the right-hand side governed by a novel recurrence for computing the higher-order moments. We propose using a form of the Grassmann--Taksar--Heyman (GTH) algorithm to solve these linear equations. Due to the form of the linear systems involved, the proposed method does not suffer from the drawbacks associated with GTH in a row-wise sparse implementation.
In vivo and In vitro Cancer Cell Growth Chronic Administration of Valproic Acid Inhibits Prostate

Valproic acid (VPA) is an established drug in the long-term therapy of seizure disorders. Recently, VPA has been associated with anticancer activity, an effect thought to be mediated through the inhibition of cellular histone deacetylase 1. We investigated the effect of various doses of VPA (0, 1.2, and 5.0 mmol/L) administered either acutely or chronically on histone acetylation, p21 gene expression, androgen receptor expression, prostate-specific antigen (PSA) expression, and cell survival and proliferation in prostate cancer cell lines. We also studied the effect of chronic VPA on tumor xenograft growth in vivo . Our results show that acute treatment (3 days) VPA can increase net histone H3 acetylation and up-regulate p21, AR, and cytosolic PSA expression. Interestingly, the effects on AR and PSA are reversed with chronic teatment. In addition, acute VPA reduces cell survival but has no effect on the subsequent proliferation of surviving cells following drug withdrawal. However, when VPA is chronically administered (10-14 days) to prostate cancer cells, even lower doses of VPA result in marked decreases in the net proliferation rate, correlating with increased caspase-2 and caspase-3 activation. These effects are evident in both androgen receptor-positive (LNCaP and C4-2) and androgen receptor-negative (DU145 and PC3) prostate cancer cells. Moreover, chronic VPA treatment results in statistically significant reduction of tumor xenograft growth in vivo . We conclude that acute treatment has nominal effects on prostate cancer cell survival and proliferation, but chronic VPA results in profound decreases in proliferation, independently of androgen regulation. (Cancer Res 2006; 66(14): 7237-44)