Miracle-dz/UniFAR-FTUs huggingface dataset:
Auricular Surface Aging: Comparing Two Methods that Assess Morphological Change in the Ilium with Bayesian Analyses

Modern standards in forensic anthropology require rigorous testing and evaluation of methods used for aging skeletal remains. Age estimation has been criticized for bias, inaccuracy, and population specificity; issues which are minimized by the application of Bayesian methodology. Using Bayesian statistics, we compare the Lovejoy et al. (Am J Phys Anthropol, 68, 1985, 15) (original) and Buckberry and Chamberlain (Am J Phys Anthropol, 119, 2002, 231) (revised) auricular surface aging methods. Transition analysis parameters derived from American males (n = 372), in combination with a Thai male (N = 37) informative prior, statistically model age in Portuguese males (n = 221). Cumulative binomial tests assess the accuracy of the generated age ranges. Overall, the application of transition analysis and Bayesian statistics significantly improved age estimation with both methods (also outperforming Suchey‐Brooks pubic symphysis aging). Moreover, the accuracy of the original method was low without statistical modeling, whereas the revised method can be applied accurately without further statistical analysis. Additionally, reference tables for aging Portuguese males are provided.
Urine Cotinine Should Be Involved in Initial Evaluation of Tinnitus in Adolescents

Objectives Smoking is associated with hearing loss, while the correlation between tinnitus and smoking is not fully elucidated. This study aimed to evaluate risk factors of tinnitus in adolescents in terms of smoking, and we identified a rectifiable parameter that can be serially monitored. Methods A cross-sectional study was conducted using data from the Korea National Health and Nutrition Examination Survey, with 2,782 participants aged 12 to 18 years, from 2008 through 2011. Participants with history of ear disease, hearing loss, and inadequate responses to questionnaires were excluded. We investigated the prevalence of tinnitus and tinnitus-related annoyance by questionnaire and sought potential risk factors in blood and urine tests and smoking history. Results The prevalence of tinnitus in the 12- to 18-year-old population was 17.5%, with 3.3% reporting tinnitus-related annoyance. On univariate analysis, the prevalence of tinnitus increased with age (P<0.001) and was higher among girls (P=0.012). Blood tests and urinalysis showed significant correlation between tinnitus and red blood cell count, alkaline phosphatase levels, and urine cotinine (P=0.002, P<0.001, P=0.018, respectively). In multivariate analysis, the urine cotinine level was the only parameter associated with tinnitus (odds ratio, 1.000; 95% confidence interval, 0.999 to 1.000; P=0.038). Smoking was also significantly correlated with tinnitus (P=0.043), and amount of smoking with tinnitus-related annoyance (P=0.045). However, current smoking and past smoking were not correlated with tinnitus. Conclusion Urine cotinine may be a rectifiable marker for management of tinnitus in adolescents. This suggests that smoking cessation should be incorporated in the management of tinnitus in adolescents.
Online Estimation of Time-Varying Volatility Using a Continuous-Discrete LMS Algorithm

The following paper addresses a problem of inference in financial engineering, namely, online time-varying volatility estimation. The proposed method is based on an adaptive predictor for the stock price, built from an implicit integration formula. An estimate for the current volatility value which minimizes the mean square prediction error is calculated recursively using an LMS algorithm. The method is then validated on several synthetic examples as well as on real data. Throughout the illustration, the proposed method is compared with both UKF and offline volatility estimation.
A clinical study of corticotomy-facilitated anterior teeth retraction in bimaxillary protrusion patients

Objectives: To compare the retraction period between corticotomy-facilitated en-masse retraction and conventional en-masse retraction orthodontic treatment (control group); and to evaluate the facial profile changes in bimaxillary protrusion patients who are treated with corticotomy-facilitated en-masse retraction. Methods: The sample consisted of 1 male and 6 females nongrowing patients (average age = 20.10  1.85 years) with Class I bimaxillary protrusion who had the treatment plan required extract 4 first premolars to reduce lips protrusion. After leveled and aligned until completed on 0.016” X 0.022” stainless steel wire, the samples were treated with corticotomy and bone graft. Two weeks later, retracted canine and anterior teeth with T-loop until the space were closed. Lateral cephalograms were taken before (T1) and after retraction (T2). The retraction period of the corticotomy-facilitated en-masse retraction group was compared with the control group (7 females, average age = 22.40  2.37 years). The facial profile change was analyzed for difference between before and after retraction soft tissue variables, upper lip to E line and lower lip to E line. Mann-Whitney U test and Wilcoxon Signed Rank test were used for statistical analysis, respectively. Results: In all patients, incisor and canine retraction was completed. The retraction period in corticotomy-facilitated en-masse retraction group showed less than conventional en-masse retraction group. (p < 0.05). The soft tissue changes were significant, whereas the upper lip to E line and lower lip to E line moved posteriorly -2.5  0.71 mm and -5.7  1.25 mm; p < 0.05, respectively. Conclusions: The results of this study show that corticotomy-facilitated orthodontic treatment was retracted upper and lower six anterior teeth more rapidly than the conventional orthodontic treatment. This technique also improved the facial profile, decreased upper and lower lips protrusion in bimaxillary protrusion patients.
Tracing the destiny of mesenchymal stem cells from embryo to adult bone marrow and white adipose tissue via Pdgfrα expression

ABSTRACT Mesenchymal stem cells (MSCs) are somatic stem cells that can be derived from adult bone marrow (BM) and white adipose tissue (WAT), and that display multipotency and self-renewal capacity. Although MSCs are essential for tissue formation and have already been used in clinical therapy, the origins and markers of these cells remain unknown. In this study, we first investigated the developmental process of MSCs in mouse embryos using the gene encoding platelet-derived growth factor receptor α (Pdgfra) as a marker. We then traced cells expressing Pdgfra and other genes (brachyury, Sox1 and Pmx1) in various mutant mouse embryos until the adult stage. This tracing of MSC origins and destinies indicates that embryonic MSCs emerge in waves and that almost all adult BM MSCs and WAT MSCs originate from mesoderm and embryonic Pdgfrα-positive cells. Furthermore, we demonstrate that adult Pdgfrα-positive cells are involved in some pathological conditions. Summary: By using mutant mice to trace mesenchymal stem cell (MSC) origins, this work provides preliminary data needed for the safe and successful application of MSCs for clinical use.
Validity of Real-Time Data Generated by a Wearable Microtechnology Device

Abstract Weaving, D, Whitehead, S, Till, K, and Jones, B. Validity of real-time data generated by a wearable microtechnology device. J Strength Cond Res 31(10): 2876–2879, 2017—The purpose of this study was to investigate the validity of global positioning system (GPS) and micro-electrical-mechanical-system (MEMS) data generated in real time through a dedicated receiver. Postsession data acted as the criterion as it is used to plan the volume and intensity of future training and is downloaded directly from the device. Twenty-five professional rugby league players completed 2 training sessions wearing an MEMS device (Catapult S5, firmware version: 5.27). During sessions, real-time data were collected through the manufacturer receiver and dedicated software (Openfield v1.14), which was positioned outdoors at the same location for every session. The GPS variables included total-, low- (0–3 m·s−1), moderate- (3.1–5 m·s−1), high- (5.1–7 m·s−1), and very high-speed (>7.1 m·s−1) distances. Micro-electrical-mechanical-system data included total session PlayerLoad. When compared to postsession data, mean bias for total-, low-, moderate-, high-, and very high-speed distances were all trivial, with the typical error of the estimate (TEE) small, small, trivial, trivial and small, respectively. Pearson correlation coefficients for total-, low-, moderate-, high- and very-high-speed distances were nearly perfect, nearly perfect, perfect, perfect, and nearly perfect, respectively. For PlayerLoad, mean bias was trivial, whereas TEE was moderate and correlation nearly perfect. Practitioners should be confident that when interpreting real-time speed-derived metrics, the data generated in real-time are comparable with those downloaded directly from the device postsession. However, practitioners should refrain from interpreting accelerometer-derived data (i.e., PlayerLoad) or acknowledge the moderate error associated with this real-time measure.
Barriers and facilitators of obesity management in families of youth with emotional and behavioral disorders

While youth with emotional and behavioral disorders experience increased rates of obesity, few obesity interventions exist that are tailored to their needs. Qualitative methods were employed to elucidate obesity management practices in this population. In all, 56 participants (i.e. 21 youths with emotional and behavioral disorders, 20 caregivers of youth with emotional and behavioral disorders, and 15 mental health providers) were recruited from community mental health centers. Participants completed a demographic form and semi-structured interview regarding obesity-related behaviors. Barriers (e.g. psychiatric symptoms) and facilitators (e.g. social support) to obesity management were identified. These results highlight preferred intervention components for this unique population.
Effects of a Peganum harmala (Zygophyllaceae) preparation for root canal disinfection

The aim of this study was to determine the antimicrobial capacity, minimum inhibitory concentration (MIC), and cytotoxic effects of a Peganum harmala seed extract in comparison to 5.25% sodium hypochlorite (NaOCl). The oral pathogen Enterococcus faecalis was used to evaluate the antimicrobial capacity, and the MIC values were determined through serial dilution. Inhibition zones were measured in millimeter, and the data were analyzed statistically by analysis of variance and the Tukey HSD test. For cytotoxicity testing, P. harmala seed extract and 5.25% NaOCl solution were incubated with L929 fibroblast cells. After 1, 24, and 72 hr of incubation, cells were stained and the optical density determined with an enzyme‐linked immunosorbent assay (ELISA) reader. Data were analyzed with Chi‐Square statistical test. The significance level was set at p < . 05. There was no significant difference between the antimicrobial capacity of 5.25% NaOCl and the P. harmala extract (p > .05; MIC 4 μg/ml). The Microculture Tetrazolium (MTT) assay test showed that the cytotoxic effects of the P. harmala extract were significantly lower than 5.25% NaOCl (p < .05). The results show that 5.25% NaOCl and P. harmala seed extract have similar antimicrobial activity against Enterococcus faecalis; but P. harmala, which shows reduced cytotoxicity, should be considered for further investigation as a safe, phytotherapeutic, intracanal irrigant.
An Analysis of Unglazed Transpired Solar Collectors Based on Exergetic Performance Criteria

In this paper, an exergetic performance analysis of unglazed transpired collectors (UTC), as well as an exergetic optimization of a typical UTC is performed. A steady-state model is used to calculate heat transfers and pressure drop through perforated plate and back wall. In order to maximize the exergy efficiency, the optimization procedure is carried out for some important parameters including plate hole diameter and hole pitch. The maximum efficieny of 5.42% is obtained. In spite of all thermal performance advantages, the UTC acts less effective in exergetic performance. Other parameters such as incident solar radiation, approach velocity, plate hole diameter and pitch are examined in the parametric study.
Human-Associated Bacteroides spp. and Human Polyomaviruses as Microbial Source Tracking Markers in Hawaii

ABSTRACT Identification of sources of fecal contaminants is needed to (i) determine the health risk associated with recreational water use and (ii) implement appropriate management practices to mitigate this risk and protect the environment. This study evaluated human-associated Bacteroides spp. (HF183TaqMan) and human polyomavirus (HPyV) markers for host sensitivity and specificity using human and animal fecal samples collected in Hawaii. The decay rates of those markers and indicator bacteria were identified in marine and freshwater microcosms exposed and not exposed to sunlight, followed by field testing of the usability of the molecular markers. Both markers were strongly associated with sewage, although the cross-reactivity of the HF183TaqMan (also present in 82% of canine [n = 11], 30% of mongoose [n = 10], and 10% of feline [n = 10] samples) needs to be considered. Concentrations of HF183TaqMan in human fecal samples exceeded those in cross-reactive animals at least 1,000-fold. In the absence of sunlight, the decay rates of both markers were comparable to the die-off rates of enterococci in experimental freshwater and marine water microcosms. However, in sunlight, the decay rates of both markers were significantly lower than the decay rate of enterococci. While both markers have their individual limitations in terms of sensitivity and specificity, these limitations can be mitigated by using both markers simultaneously; ergo, this study supports the concurrent use of HF183TaqMan and HPyV markers for the detection of sewage contamination in coastal and inland waters in Hawaii. IMPORTANCE This study represents an in-depth characterization of microbial source tracking (MST) markers in Hawaii. The distribution and concentrations of HF183TaqMan and HPyV markers in human and animal fecal samples and in wastewater, coupled with decay data obtained from sunlight-exposed and unexposed microcosms, support the concurrent application of HF183TaqMan and HPyV markers for sewage contamination detection in Hawaii waters. Both markers are more conservative and more specific markers of sewage than fecal indicator bacteria (enterococci and Escherichia coli). Analysis of HF183TaqMan (or newer derivatives) is recommended for inclusion in future epidemiological studies concerned with beach water quality, while better concentration techniques are needed for HPyV. Such epidemiological studies can be used to develop new recreational water quality criteria, which will provide direct information on the absence or presence of sewage contamination in water samples as well as reliable measurements of the risk of waterborne disease transmission to swimmers.
Oxytocin reactivity during intergroup conflict in wild chimpanzees

Significance Warfare is one of the most pervasive problems among human societies, and understanding mechanisms involved in in-group cooperation and favoritism is of paramount importance. Wild chimpanzees share key features of humans’ intergroup conflict, in terms of in-group coordination, coalitionary support, and out-group hostility. The hormone oxytocin may regulate humans’ intergroup conflict, although tests in natural settings are lacking. We found strong evidence that, like in humans, oxytocin is involved in chimpanzee intergroup conflict. Both intergroup conflict anticipation and participation involved high urinary oxytocin levels, irrespective of intragroup affiliations or potential threat by rivals. These results are indicative of similar physiological processes involved in intergroup violence and intragroup support in both species, likely supporting behavior that is adaptive during intergroup conflicts. Intergroup conflict is evident throughout the history of our species, ubiquitous across human societies, and considered crucial for the evolution of humans’ large-scale cooperative nature. Like humans, chimpanzee societies exhibit intragroup coordination and coalitionary support during violent intergroup conflicts. In both species, cooperation among group members is essential for individuals to gain access to benefits from engaging in intergroup conflict. Studies suggest that a contributive mechanism regulating in-group cooperation during intergroup conflicts in humans involves the neuropeptide hormone oxytocin, known to influence trust, coordination, and social cognition, although evidence from natural settings is lacking. Here, applying a noninvasive method, we investigate oxytocinergic system involvement during natural intergroup conflicts in wild chimpanzees. We found that chimpanzees of both sexes had significantly higher urinary oxytocin levels immediately before and during intergroup conflict compared with controls. Also, elevated hormone levels were linked with greater cohesion during intergroup conflicts, rather than with the level of potential threat posed by rival groups, intragroup affiliative social interactions, or coordinated behavior alone. Thus, the oxytocinergic system, potentially engendering cohesion and cooperation when facing an out-group threat, may not be uniquely human but rather a mechanism with evolutionary roots shared by our last common ancestor with chimpanzees, likely expediting fitness gains during intergroup conflict.
Astrocyte-derived interleukin-15 exacerbates ischemic brain injury via propagation of cellular immunity

Significance Ischemic stroke is a leading cause of death and disability worldwide. Evidence indicates the detrimental effects of lymphocyte infiltration into the ischemic brain. However, a knowledge gap exists relating to the brain-specific cellular constituents and environmental factors that dictate the phenotype and function of infiltrating lymphocytes. Astrocytes bridge interactions between ischemic neurons and lymphocytes. We show that brain ischemia induces robust up-regulation of astrocytic interleukin-15 (IL-15). The present study was directed toward understanding the role of astrocyte-derived factors such as IL-15 in stroke. We discovered that astrocytic IL-15 is necessary and sufficient to amplify cell-mediated immune responses that promote ischemic brain injury. These results provide definitive evidence on the role of astrocyte-derived IL-15 in ischemic brain injury. Astrocytes are believed to bridge interactions between infiltrating lymphocytes and neurons during brain ischemia, but the mechanisms for this action are poorly understood. Here we found that interleukin-15 (IL-15) is dramatically up-regulated in astrocytes of postmortem brain tissues from patients with ischemic stroke and in a mouse model of transient focal brain ischemia. We generated a glial fibrillary acidic protein (GFAP) promoter-controlled IL-15–expressing transgenic mouse (GFAP–IL-15tg) line and found enlarged brain infarcts, exacerbated neurodeficits after the induction of brain ischemia. In addition, knockdown of IL-15 in astrocytes attenuated ischemic brain injury. Interestingly, the accumulation of CD8+ T and natural killer (NK) cells was augmented in these GFAP–IL-15tg mice after brain ischemia. Of note, depletion of CD8+ T or NK cells attenuated ischemic brain injury in GFAP–IL-15tg mice. Furthermore, knockdown of the IL-15 receptor α or blockade of cell-to-cell contact diminished the activation and effector function of CD8+ T and NK cells in GFAP–IL-15tg mice, suggesting that astrocytic IL-15 is delivered in trans to target cells. Collectively, these findings indicate that astrocytic IL-15 could aggravate postischemic brain damage via propagation of CD8+ T and NK cell-mediated immunity.
Antibacterial Activity of Triterpene Acids and Semi-Synthetic Derivatives against Oral Pathogens

Triterpene acids (ursolic, oleanoic, gypsogenic, and sumaresinolic acids) isolated from Miconia species, along with a mixture of ursolic and oleanolic acids and a mixture of maslinic and 2-α-hydroxyursolic acids, as well as ursolic acid derivatives were evaluated against the following microorganisms: Streptococcus mutans, Streptococcus mitis, Streptococcus sanguinis, Streptococcus salivarius, Streptococcus sobrinus, and Enterococcus faecalis, which are potentially responsible for the formation of dental caries in humans. The microdilution method was used for the determination of the minimum inhibitory concentration (MIC) during the evaluation of the antibacterial activity. All the isolated compounds, mixtures, and semi-synthetic derivatives displayed activity against all the tested bacteria, showing that they are promising antiplaque and anticaries agents. Ursolic and oleanolic acids displayed the most intense antibacterial effect, with MIC values ranging from 30 μg/mL to 80 μg/mL. The MIC values of ursolic acid derivatives, as well as those obtained for the mixture of ursolic and oleanolic acids showed that these compounds do not have higher antibacterial activity when compared with the activity observed with either ursolic acid or oleanolic acid alone. With regard to the structure-activity relationship of triterpene acids and derivatives, it is suggested that both hydroxy and carboxy groups present in the triterpenes are important for their antibacterial activity against oral pathogens.
Coping with heat: behavioural and physiological responses of savanna elephants in their natural habitat

Abstract Most of southern Africa's elephants inhabit environments where environmental temperatures exceed body temperature, but we do not know how elephants respond to such environments. We evaluated the relationships between apparent thermoregulatory behaviour and environmental, skin and core temperatures for tame savanna elephants (Loxodonta africana) that were free-ranging in the hot parts of the day, in their natural environment. Environmental temperature dictated elephant behaviour within a day, with potential consequences for fine-scale habitat selection, space use and foraging. At black globe temperatures of ~30°C, elephants adjusted their behaviour to reduce environmental heat load and increase heat dissipation (e.g. shade use, wetting behaviour). Resting, walking and feeding were also influenced by environmental temperature. By relying on behavioural and autonomic adjustments, the elephants maintained homeothermy, even at environmental temperatures exceeding 40°C. Elephants clearly have the capacity to deal with extreme heat, at least in environments with adequate resources of forage, water and shade. Future conservation actions should provide for the thermoregulatory, resource and spatial needs of elephants.