Miracle-dz/UniFAR-FTUs huggingface dataset:
Involvement of the larynx motor area in singing-voice perception: a TMS study†

Recent evidence has reported that the motor system has a role in speech or emotional vocalization discrimination. In the present study we investigated the involvement of the larynx motor representation in singing perception. Twenty-one non-musicians listened to short tones sung by a human voice or played by a machine and performed a categorization task. Thereafter continuous theta-burst transcranial magnetic stimulation was applied over the right larynx premotor area or on the vertex and the test administered again. Overall, reaction times (RTs) were shorter after stimulation over both sites. Nonetheless and most importantly, RTs became longer for sung than for “machine” sounds after stimulation on the larynx area. This effect suggests that the right premotor region is functionally involved in singing perception and that sound humanness modulates motor resonance.
Examining similarities and differences among parent-teacher reports of Spanish-English productive vocabulary.

PURPOSE The purposes of the present study were to (a) explore the relationship between parent and teacher reports of children's bilingual (Spanish-English) productive vocabulary and (b) examine similarities and differences among parent-teacher reports. Word categories were examined to determine the nature of similarities and differences. METHOD Parents and teachers of eleven Spanish-English bilinguals ( Mage = 44.5 months) completed the MacArthur-Bates Communicative Development Inventory upper extension and an experimental version of a congruent Spanish form at 2 time points. Percent agreement, kappa coefficient, and Spearman's rho were employed to estimate overall interrater agreement and agreement on specific word categories. RESULTS Results indicated inconsistent levels of overall agreement across measures and forms. Higher levels of parent-teacher agreement were observed on Spanish forms at either time point using Spearman's rho coefficient and kappa, whereas percent agreement was higher on English forms. Limited overlap of high agreement between parents and teachers was found on word categories across indices. Unique contributions of reporters were observed. CONCLUSION This work underscores the utility of multiple informants of bilingual children's productive vocabulary. Combined and unique contributions of parent and teacher reporters may inform the language development of preschool-age bilingual children as productive vocabulary skills develop and change.
Evidence for the Mitochondrial Lactate Oxidation Complex in Rat Neurons: Demonstration of an Essential Component of Brain Lactate Shuttles

To evaluate the presence of components of a putative Intracellular Lactate Shuttle (ILS) in neurons, we attempted to determine if monocarboxylate (e.g. lactate) transporter isoforms (MCT1 and -2) and lactate dehydrogenase (LDH) are coexpressed in neuronal mitochondria of rat brains. Immunohistochemical analyses of rat brain cross-sections showed MCT1, MCT2, and LDH to colocalize with the mitochondrial inner membrane marker cytochrome oxidase (COX) in cortical, hippocampal, and thalamic neurons. Immunoblotting after immunoprecipitation (IP) of mitochondria from brain homogenates supported the histochemical observations by demonstrating that COX coprecipitated MCT1, MCT2, and LDH. Additionally, using primary cultures from rat cortex and hippocampus as well as immunohistochemistry and immunocoprecipitation techniques, we demonstrated that MCT2 and LDH are coexpressed in mitochondria of cultured neurons. These findings can be interpreted to mean that, as in skeletal muscle, neurons contain a mitochondrial lactate oxidation complex (mLOC) that has the potential to facilitate both intracellular and cell-cell lactate shuttles in brain.
Inactivation or Loss of TTP Promotes Invasion in Head and Neck Cancer via Transcript Stabilization and Secretion of MMP9, MMP2, and IL-6

Purpose: Invasion is the critical step in progression of a precancerous lesion to squamous cell carcinoma of the head and neck (HNSCC). Invasion is regulated by multiple proinflammatory mediators. Tristetraprolin (TTP) is an mRNA-degrading protein that regulates multiple proinflammatory mediators. TTP may serve as an excellent treatment target. Rap1 is a ras-like oncoprotein that induces critical signaling pathways. In this study, the role of rap1 in TTP-mediated invasion was investigated. Experimental Design: Using complementary approaches, we modulated TTP and altered expression of interleukin (IL)-6 and matrix metalloproteinase (MMP) 2/9, which were quantified by ELISA and zymogram. Invasion was evaluated in vitro using the oral-cancer-equivalent (OCE) three-dimensional model and in vivo in the chick chorioallantoic membrane (CAM). The role of rap1 and p38 were established using knockdown strategies. Results: Downregulation of TTP significantly increased invasion via secretion of MMP9/2 and IL-6. In the novel OCE and CAM invasion models of HNSCC, cells with downregulated TTP destroyed the basement membrane to invade the underlying connective tissue. Rap1 induces p38 mitogen-activated protein kinase (p38)-mediated inactivation of TTP. Inactive TTP enhances transcript stability via binding to the 3′-untranslated region (UTR). High IL-6 and MMP9 are prognostic for poor clinical outcomes in patients with HNSCC. Conclusions: Targeting the rap1-p38-TTP cascade is an attractive novel treatment strategy in HNSCC to concurrently suppress multiple mediators of invasion. Clin Cancer Res; 19(5); 1169–79. ©2012 AACR.
Optical and neural anisotropy in peripheral vision

Optical blur in the peripheral retina is known to be highly anisotropic due to nonrotationally symmetric wavefront aberrations such as astigmatism and coma. At the neural level, the visual system exhibits anisotropies in orientation sensitivity across the visual field. In the fovea, the visual system shows higher sensitivity for cardinal over diagonal orientations, which is referred to as the oblique effect. However, in the peripheral retina, the neural visual system becomes more sensitive to radially-oriented signals, a phenomenon known as the meridional effect. Here, we examined the relative contributions of optics and neural processing to the meridional effect in 10 participants at 0°, 10°, and 20° in the temporal retina. Optical anisotropy was quantified by measuring the eye's habitual wavefront aberrations. Alternatively, neural anisotropy was evaluated by measuring contrast sensitivity (at 2 and 4 cyc/deg) while correcting the eye's aberrations with an adaptive optics vision simulator, thus bypassing any optical factors. As eccentricity increased, optical and neural anisotropy increased in magnitude. The average ratio of horizontal to vertical optical MTF (at 2 and 4 cyc/deg) at 0°, 10°, and 20° was 0.96 ± 0.14, 1.41 ± 0.54 and 2.15 ± 1.38, respectively. Similarly, the average ratio of horizontal to vertical contrast sensitivity with full optical correction at 0°, 10°, and 20° was 0.99 ± 0.15, 1.28 ± 0.28 and 1.75 ± 0.80, respectively. These results indicate that the neural system's orientation sensitivity coincides with habitual blur orientation. These findings support the neural origin of the meridional effect and raise important questions regarding the role of peripheral anisotropic optical quality in developing the meridional effect and emmetropization.
The molecular requirements for LAT‐mediated differentiation and the role of LAT in limiting pre‐B cell expansion

Successful recombination of the heavy‐chain locus in developing B cells results in the expression of the pre‐BCR, which induces the proliferation and expansion of pre‐B cells. To avoid uncontrolled proliferation, pre‐BCR signals transmitted via the adaptor protein SLP‐65 (SH2‐domain‐containing leukocyte protein of 65 kDa) lead to the down‐regulation of pre‐BCR expression and to pre‐B cell differentiation. Here, we show that, similarly to SLP‐65, the adaptor protein LAT (linker for activation of T cells) limits pre‐B cell proliferation and reduces the potential of a tumorgenic pre‐B cell line to develop leukemia in immune‐deficient mice. We further show that the four distal tyrosines are required for LAT activity in pre‐B cells. Mutation at Y136 completely abolishes LAT activity, whereas single point‐mutations at Y175, Y195 or Y235 impair, but do not block, LAT‐induced pre‐B cell differentiation. As LAT is also expressed in human pre‐B cells, our results suggest that LAT cooperates with SLP‐65 to promote the differentiation and control the proliferation of both murine and human pre‐B cells.
Kindergarten Prevention of Dyslexia

This study examined the effects of training in phonological awareness on kindergarten children. Comparisons of children at risk (i.e., children with initially low levels of metalinguistic ability) with initially average and advanced children revealed that training gains were similar for all of these groups. Furthermore, training had comparable long-term effects on reading and spelling in Grades 1 and 2 for each group. In fact, the trained children at risk showed better reading and spelling performance than a randomly selected control group. Although considerable individual differences in training effectiveness were found within the group of at-risk children, there was clear evidence that the training program substantially reduced the risk of becoming dyslexic in school.
Venezuelan Equine Encephalitis Virus Induces Apoptosis through the Unfolded Protein Response Activation of EGR1

ABSTRACT Venezuelan equine encephalitis virus (VEEV) is a previously weaponized arthropod-borne virus responsible for causing acute and fatal encephalitis in animal and human hosts. The increased circulation and spread in the Americas of VEEV and other encephalitic arboviruses, such as eastern equine encephalitis virus and West Nile virus, underscore the need for research aimed at characterizing the pathogenesis of viral encephalomyelitis for the development of novel medical countermeasures. The host-pathogen dynamics of VEEV Trinidad donkey-infected human astrocytoma U87MG cells were determined by carrying out RNA sequencing (RNA-Seq) of poly(A) and mRNAs. To identify the critical alterations that take place in the host transcriptome following VEEV infection, samples were collected at 4, 8, and 16 h postinfection and RNA-Seq data were acquired using an Ion Torrent PGM platform. Differential expression of interferon response, stress response factors, and components of the unfolded protein response (UPR) was observed. The protein kinase RNA-like endoplasmic reticulum kinase (PERK) arm of the UPR was activated, as the expression of both activating transcription factor 4 (ATF4) and CHOP (DDIT3), critical regulators of the pathway, was altered after infection. Expression of the transcription factor early growth response 1 (EGR1) was induced in a PERK-dependent manner. EGR1−/− mouse embryonic fibroblasts (MEFs) demonstrated lower susceptibility to VEEV-induced cell death than isogenic wild-type MEFs, indicating that EGR1 modulates proapoptotic pathways following VEEV infection. The influence of EGR1 is of great importance, as neuronal damage can lead to long-term sequelae in individuals who have survived VEEV infection. IMPORTANCE Alphaviruses represent a group of clinically relevant viruses transmitted by mosquitoes to humans. In severe cases, viral spread targets neuronal tissue, resulting in significant and life-threatening inflammation dependent on a combination of virus-host interactions. Currently there are no therapeutics for infections cause by encephalitic alphaviruses due to an incomplete understanding of their molecular pathogenesis. Venezuelan equine encephalitis virus (VEEV) is an alphavirus that is prevalent in the Americas and that is capable of infecting horses and humans. Here we utilized next-generation RNA sequencing to identify differential alterations in VEEV-infected astrocytes. Our results indicated that the abundance of transcripts associated with the interferon and the unfolded protein response pathways was altered following infection and demonstrated that early growth response 1 (EGR1) contributed to VEEV-induced cell death.
Neuroleptics antagonize a calcium-activated potassium channel in airway smooth muscle

We examined the effect of neuroleptics on Ca-activated K channels from dog airway smooth muscle cells. Because these agents inhibit a variety of other Ca-mediated processes, it seemed possible that they might also inhibit Ca-activated K channels. In excised, inside-out patches, several neuroleptics potently and reversibly inhibited the K channel from the internal but not the external surface of the patch. Measurements of the effect on open probability and open- and closed- state durations support a simple kinetic model in which neuroleptics bind to and block the open channel. Inhibition by neuroleptics was moderately voltage dependent, with blockers less potent at hyperpolarizing voltages. The relationship between voltage and the dissociation constant for the blocker suggests that the binding site is one-third of the way across the channel's electrical field. Equilibrium dissociation constants for the drug-channel complex were: haloperidol, 1.0 +/- 0.1 microM; trifluoperazine, 1.4 +/- 0.1 microM; thioridazine, 2.4 +/- 0.1 microM; and chlorpromazine, 2.0 microM. This rank-order potency is different from their potency as calmodulin inhibitors, which suggests that neuroleptics bind to the channel rather than a calmodulin- channel complex.
Effects of the Processing Parameters on the Forming Quality of Stainless Steel Parts by Selective Laser Melting

Selective Laser Melting (SLM) can produce high-performance metal parts with complex structures. However, it’s difficult to control the processing parameters, because many factors involves. From the perspective of the molten pool, the study focuses on the effects of processing parameters, including scanning speed, laser power, scanning space, layer thickness, and scanning strategies, on the surface quality, the balling effect, the density of SLM parts, by conducting experiments of single track, single layer and block forming. The results show that the quality of the molten pool is affected by laser power and scanning speed. Scanning drove in the strategy of “jumping and turning”，a smooth surface and a less balling effect will be obtained. The thicker the powder layer is, the lower density will be obtained. The optimal parameters from series of experiments are: laser power of 98W; scanning speed of 90mm/s; scanning space of 0.07mm; layer thickness of 0.1mm; and scanning strategy of “jumping and turning”.
Characterization of the microtubule-activated ATPase of brain cytoplasmic dynein (MAP 1C)

We recently found that the brain cytosolic microtubule-associated protein 1C (MAP 1C) is a microtubule-activated ATPase, capable of translocating microtubules in vitro in the direction corresponding to retrograde transport. (Paschal, B. M., H. S. Shpetner, and R. B. Vallee. 1987b. J. Cell Biol. 105:1273-1282; Paschal, B. M., and R. B. Vallee. 1987. Nature [Lond.]. 330:181-183.). Biochemical analysis of this protein (op. cit.) as well as scanning transmission electron microscopy revealed that MAP 1C is a brain cytoplasmic form of the ciliary and flagellar ATPase dynein (Vallee, R. B., J. S. Wall, B. M. Paschal, and H. S. Shpetner. 1988. Nature [Lond.]. 332:561-563). We have now characterized the ATPase activity of the brain enzyme in detail. We found that microtubule activation required polymeric tubulin and saturated with increasing tubulin concentration. The maximum activity at saturating tubulin (Vmax) varied from 186 to 239 nmol/min per mg. At low ionic strength, the Km for microtubules was 0.16 mg/ml tubulin, substantially lower than that previously reported for axonemal dynein. The microtubule-stimulated activity was extremely sensitive to changes in ionic strength and sulfhydryl oxidation state, both of which primarily affected the microtubule concentrations required for half- maximal activation. In a number of respects the brain dynein was enzymatically similar to both axonemal and egg dyneins. Thus, the ATPase required divalent cations, calcium stimulating activity less effectively than magnesium. The MgATPase was inhibited by metavandate (Ki = 5-10 microM for the microtubule-stimulated activity), 1 mM NEM, and 1 mM EHNA. In contrast to other dyneins, the brain enzyme hydrolyzed CTP, TTP, and GTP at higher rates than ATP. Thus, the enzymological properties of the brain cytoplasmic dynein are clearly related to those of other dyneins, though the brain enzyme is unique in its substrate specificity and in its high sensitivity to stimulation by microtubules.
Higher Frequency of Diploidy in Young-Onset Microsatellite-Stable Colorectal Cancer

Purpose: Colorectal carcinoma (CRC) can be divided into two nonoverlapping groups: those that are chromosomally unstable but microsatellite stable (MSS CIN+) and those that are chromosomally stable but microsatellite unstable (MSI CIN−). However, a third group with neither chromosome nor microsatellite instability (MSS CIN−) makes a substantial contribution to the total CRC burden. The clinicopathologic features of MSS CIN− CRC are not well delineated. We assessed the relationship between age and chromosomal instability (CIN) status as measured by ploidy and allelic imbalance in a series of MSS tumors. Experimental Design: We studied a prospectively collected series of CRC patients at Mayo Clinic Rochester. A total of 84 samples of MSS CRC in patients ≤50 years old were identified between 1994 and 1997. A consecutive series of 90 MSS CRC in patients ≥65 years old served as a comparison group. CIN status was assessed using two techniques: ploidy analysis by flow cytometry and small chromosome changes as measured by genomewide fractional allelic imbalance. Results: CRC in the young-onset group was more likely to involve the rectum and to be high stage. MSS tumors in the young-onset group were more often diploid (46%) than those in older patients (26%; P = 0.006). This difference was maintained in the subset of MSS CRC that were high stage (42% versus 18%; P = 0.02) and in rectal cancers (50% versus 23%; P = 0.04). Conclusion: A greater proportion of young patients with MSS CRC has diploid tumors than patients who develop MSS CRC over age 65.
Field performance of subterranean clover germplasm in relation to severity of Cercospora disease

Ninety six genotypes, including 14 cultivars, of Trifolium subterraneum var. subterraneum and var. yanninicum were screened in the field for resistance to Cercospora (Cercospora zebrina). Seven genotypes, 84S43-13, 84S43-15, EP132Sub-E, 84Y32-59, 83Y83-23, 84Y32-42 and 83Y79-20, were totally resistant to Cercospora disease. A further 26 genotypes, including the cvv. Meteora and Napier, had an incidence of Cercospora of <1 (0–10 scale) and no consequent leaf collapse from the disease (score 0; 0-10 scale), while 15 genotypes had incidence scores between 1 and 2 without any leaf collapse evident. There was excellent overall correlation between Cercospora incidence and leaf collapse across the genotypes tested, with both strong quadratic (y = -0.17x2 + 2.50x + 1.33; R2 =0.89) and linear (y = 0.96x+ 1.63; R2 =0.82) components to this relationship. There was circumstantial evidence of ecogeographical differences for Cercospora resistance among ecotypes collected from different regions. Of eight overseas introductions with Cercospora incidence scores of <2 and a Cercospora leaf collapse score of 0, six were from Sardinia and one each were from Portugal and Greece. In contrast, all seven Sicilian ecotypes had Cercospora incidence scores of 7.75 or greater. The high degree of resistance observed in many of the genotypes to Cercospora highlights the existence of many exce llent sources of resistance that could be exploited in breeding and development programmes to minimise production losses in Australian subterranean clover pastures.
Shortwave Radiative Impacts from Aerosol Effects on Marine Shallow Cumuli

The net shortwave radiative impact of aerosol on simulations of two shallow marine cloud cases is investigated using a Monte Carlo radiative transfer model. For a shallow cumulus case, increased aerosol concentrations are associated not only with smaller droplet sizes but also reduced cloud fractions and cloud dimensions, a result of evaporation-induced mixing and a lack of precipitation. Three-dimensional radiative transfer (3DRT) effects alter the fluxes by 10%–20% from values calculated using the independent column approximation for these simulations. The first (Twomey) aerosol indirect effect is dominant but the decreased cloud fraction reduces the magnitude of the shortwave cloud forcing substantially. The 3DRT effects slightly decrease the sensitivity of the cloud albedo to changes in droplet size under an overhead sun for the two ranges of cloud liquid water paths examined, but not strongly so. A popular two-stream radiative transfer approximation to the cloud susceptibility overestimates the more directly calculated values for the low liquid-water-path clouds within pristine aerosol conditions by a factor of 2 despite performing well otherwise, suggesting caution in its application to the cloud albedos within broken cloud fields. An evaluation of the influence of cloud susceptibility and cloud fraction changes to a “domain” area-weighted cloud susceptibility found that the domain cloud albedo is more likely to increase under aerosol loading at intermediate aerosol concentrations than under the most pristine conditions, contrary to traditional expectations. The second simulation (cumulus penetrating into stratus) is characterized by higher cloud fractions and more precipitation. This case has two regimes: a clean, precipitating regime where cloud fraction increases with increasing aerosol, and a more polluted regime where cloud fraction decreases with increasing aerosol. For this case the domain-mean cloud albedo increases steadily with aerosol loading under clean conditions, but increases only slightly after the cloud coverage decreases. Three-dimensional radiative transfer effects are mostly negligible for this case. Both sets of simulations suggest that aerosol-induced cloud fraction changes must be considered in tandem with the Twomey effect for clouds of small dimensions when assessing the net radiative impact, because both effects are drop size dependent and radiatively significant.
Texture Image Retrieval Using Novel Non-separable Filter Banks Based on Centrally Symmetric Matrices

Though millions of images are stored in a large digital image library today, the user can not access or make full use of these image information unless the digital image library is well organized in order to allow efficient browsing, searching and retrieval. Thus, research in image retrieval has been an active discipline since 70's last century. Image retrieval is a typical problem of pattern recognition, consisting of two parts: extracting features (EF) and similarity measurement (SM). In this paper, we develop new non-separable filter banks based on the centrally symmetric matrices, and apply them to extract the features of texture images. Compared to tensor product wavelets, our new filter banks can capture more directional texture information, which is helpful for texture image retrieval. Experiments show that our novel non-separable filter banks are satisfiable and achieve a better retrieval effectiveness than Daubechies wavelets