Miracle-dz/UniFAR-FTUs huggingface dataset:
A Tactile-Based Framework for Active Object Learning and Discrimination using Multimodal Robotic Skin

In this letter, we propose a complete probabilistic tactile-based framework to enable robots to autonomously explore unknown workspaces and recognize objects based on their physical properties. Our framework consists of three components: 1) an active pretouch strategy to efficiently explore unknown workspaces; 2) an active touch learning method to learn about unknown objects based on their physical properties (surface texture, stiffness, and thermal conductivity) with the least number of training samples; and 3) an active touch algorithm for object discrimination, which selects the most informative exploratory action to apply to the object, so that the robot can efficiently distinguish between objects with a few number of actions. Our proposed framework was experimentally evaluated using a robotic arm equipped with multimodal artificial skin. The robot with the active pretouch method reduced the uncertainty of the workspace up to 30% and 70% compared to uniform and random strategies, respectively. By means of the active touch learning algorithm, the robot used 50% fewer samples to achieve the same learning accuracy than the baseline methods. By taking advantage of the prior knowledge obtained during the learning process, the robot actively discriminated objects with an improvement of 10% recognition accuracy compare to the random action selection approach.
Imaging Anyons with Scanning Tunneling Microscopy

Anyons are exotic quasiparticles with fractional charge that can emerge as fundamental excitations of strongly interacting topological quantum phases of matter. Unlike ordinary fermions and bosons, they may obey non-Abelian statistics—a property that would help realize fault-tolerant quantum computation. Non-Abelian anyons have long been predicted to occur in the fractional quantum Hall (FQH) phases that form in two-dimensional electron gases in the presence of a large magnetic field, such as the ν=5/2 FQH state. However, direct experimental evidence of anyons and tests that can distinguish between Abelian and non-Abelian quantum ground states with such excitations have remained elusive. Here, we propose a new experimental approach to directly visualize the structure of interacting electronic states of FQH states with the STM. Our theoretical calculations show how spectroscopy mapping with the STM near individual impurity defects can be used to image fractional statistics in FQH states, identifying unique signatures in such measurements that can distinguish different proposed ground states. The presence of locally trapped anyons should leave distinct signatures in STM spectroscopic maps, and enables a new approach to directly detect—and perhaps ultimately manipulate—these exotic quasiparticles.
Toxoplasma gondii disrupts β1 integrin signaling and focal adhesion formation during monocyte hypermotility

The motility of blood monocytes is orchestrated by the activity of cell-surface integrins, which translate extracellular signals into cytoskeletal changes to mediate adhesion and migration. Toxoplasma gondii is an intracellular parasite that infects migratory cells and enhances their motility, but the mechanisms underlying T. gondii–induced hypermotility are incompletely understood. We investigated the molecular basis for the hypermotility of primary human peripheral blood monocytes and THP-1 cells infected with T. gondii. Compared with uninfected monocytes, T. gondii infection of monocytes reduced cell spreading and the number of activated β1 integrin clusters in contact with fibronectin during settling, an effect not observed in monocytes treated with lipopolysaccharide (LPS) or Escherichia coli. Furthermore, T. gondii infection disrupted the phosphorylation of focal adhesion kinase (FAK) at tyrosine 397 (Tyr-397) and Tyr-925 and of the related protein proline-rich tyrosine kinase (Pyk2) at Tyr-402. The localization of paxillin, FAK, and vinculin to focal adhesions and the colocalization of these proteins with activated β1 integrins were also impaired in T. gondii–infected monocytes. Using time-lapse confocal microscopy of THP-1 cells expressing enhanced GFP (eGFP)–FAK during settling on fibronectin, we found that T. gondii–induced monocyte hypermotility was characterized by a reduced number of enhanced GFP-FAK–containing clusters over time compared with uninfected cells. This study demonstrates an integrin conformation–independent regulation of the β1 integrin adhesion pathway, providing further insight into the molecular mechanism of T. gondii–induced monocyte hypermotility.
Modeling Continuous Prognostic Factors in Survival Analysis: Implications for Tumor Staging and Assessing Chemotherapy Effect in Osteosarcoma

Extent of response to neoadjuvant chemotherapy, tumor size, and patient age are important prognostic variables for patients with osteosarcoma, but applying information from these continuous variables in survival models is difficult. Dichotomization is usually inappropriate and alternative statistical techniques should be considered instead. Nonlinear multivariable regression methods (restricted cubic splines and fractional polynomials) were applied to data from the National Cancer Database to model continuous prognostic factors for overall survival from localized, high-grade osteosarcoma of the appendicular and nonspinal skeleton following neoadjuvant chemotherapy and surgical resection (N=2493). The assumption that log hazard ratios were linear in relation to these continuous prognostic factors was tested using likelihood ratio tests of model deviance and Wald tests of spline coefficients. Log hazard ratios for increasing patient age were linear over the range of 4 to 80 years, but showed evidence for variation in the coefficient over elapsed follow-up time. Tumor size also showed a linear relationship with log hazard over the range of 1 to 30 cm. Hazard ratios for chemotherapy effect profoundly deviated from log-linear (P<0.004), with significantly decreased hazard for death from baseline for patients with ≥90% tumor necrosis (hazard ratio, 0.32; 95% confidence interval, 0.20-0.52; P<0.0001). Important implications of these results include: (1) ≥90% tumor necrosis defines good chemotherapy response in a clinically useful manner; (2) staging osteosarcoma by dichotomizing tumor size is inappropriate; and (3) patient age can be modeled as a linear effect on the log hazard ratio in prognostic models with the caveat that risk may change over duration of the analysis.
Amination of black liquor and the application in the ready-mixed wet mortar

ABSTRACT In order to extend the application of black liquor (BL), amino group was introduced in lignin through Mannich reaction. The structure of the aminated black liquor (ABL) was characterized with FT-IR, elemental analysis, the zeta potential and the inherent viscosity. The foam generated by ABL was more stable, for the surface tension was lower. The results of the mortar test indicated that the water-retention rate of the fresh mortar incorporated with 0.3 wt% ABL was 89.1%; the consistency loss was about 39.7% after 4 h. When the dosage was less than 0.3 wt%, ABL could increase the bond strength of the hardened mortars. The results showed that ABL could be used as an effective ready-mixed wet mortar admixture. This study not only provided a new method to develop new mortar admixture, but also alleviated the pollution of BL.
Obstetrical, pregnancy and socio-economic predictors for new-onset severe postpartum psychiatric disorders in primiparous women

Background Childbirth is a potent trigger for the onset of psychiatric illness in women including postpartum depression (PPD) and postpartum psychosis (PP). Medical complications occurring during pregnancy and/or childbirth have been linked to postpartum psychiatric illness and sociodemographic factors. We evaluated if pregnancy and obstetrical predictors have similar effects on different types of postpartum psychiatric disorders. Method A population-based cohort study using Danish registers was conducted in 392 458 primiparous women with a singleton delivery between 1995 and 2012 and no previous psychiatric history. The main outcome was first-onset postpartum psychiatric episodes. Incidence rate ratios (IRRs) were calculated for any psychiatric contact in four quarters for the first year postpartum. Results PPD and postpartum acute stress reactions were associated with pregnancy and obstetrical complications. For PPD, hyperemesis gravidarum [IRR 2.69, 95% confidence interval (CI) 1.93–3.73], gestational hypertension (IRR 1.84, 95% CI 1.33–2.55), pre-eclampsia (IRR 1.45, 95% CI 1.14–1.84) and Cesarean section (C-section) (IRR 1.32, 95% CI 1.13–1.53) were associated with increased risk. For postpartum acute stress, hyperemesis gravidarum (IRR 1.93, 95% CI 1.38–2.71), preterm birth (IRR 1.51, 95% CI 1.30–1.75), gestational diabetes (IRR 1.42, 95% CI 1.03–1.97) and C-section (IRR 1.36, 95% CI 1.20–1.55) were associated with increased risk. In contrast, risk of PP was not associated with pregnancy or obstetrical complications. Conclusions Pregnancy and obstetrical complications can increase the risk for PPD and acute stress reactions but not PP. Identification of postpartum women requiring secondary care is needed to develop targeted approaches for screening and treatment. Future work should focus on understanding the contributions of psychological stressors and underlying biology on the development of postpartum psychiatric illness.
Patterns of False Memory in Patients with Huntington's Disease

Objective Increased false memory recognition in patients with Huntington's disease (HD) has been widely reported; however, the underlying memory constructive processes remain unclear. The present study explored gist memory, item-specific memory, and monitoring ability in patients with HD. Method Twenty-five patients (including 13 patients with mild HD and 12 patients with moderate-to-severe HD) and 30 healthy comparison participants (HC) were recruited. We used the Deese-Roediger-McDermott (DRM) paradigm to investigate participants' false recognition patterns, along with neuropsychological tests to assess general cognitive function. Results Both mild and moderate-to-severe patients with HD showed significant executive functioning and episodic memory impairment. On the DRM tasks, both HD patient groups showed significantly impaired performance in tasks assessing unrelated false recognition and item-specific memory as compared to the HC group; moderate-to-severe patients performed more poorly than mild patients did. Only moderate-severe patients exhibited significantly poorer related false recognition index scores than HCs in the verbal DRM task; performance of HD patient groups was comparable to the HC group on the pictorial DRM task. Conclusions It appears that diminished verbatim memory and monitoring ability are early signs of cognitive decline during the HD course. Conversely, gist memory is relatively robust, with only partial decline during advanced-stage HD. Our findings suggest that medial temporal lobe function is relatively preserved compared to that of frontal-related structures in early HD. Thus, gist-based memory rehabilitation programs might be beneficial for patients with HD.
The Potential of Phytomelatonin as a Nutraceutical

Phytomelatonin (plant melatonin) is chemically related to the amino acid tryptophan and has many diverse properties. Phytomelatonin is an interesting compound due to its outstanding actions at the cellular and physiological level, especially its protective effect in plants exposed to diverse stress situations, while its vegetable origin offers many opportunities because it is a natural compound. We present an overview of its origin, its action in plants in general (particularly in plant species with high levels of phytomelatonin), and its possibilities for use as a nutraceutical with particular attention paid to the beneficial effects that it may have in human health. The differences between synthetic melatonin and phytomelatonin, according to its origin and purity, are presented. Finally, the current market for phytomelatonin and its limits and potentials are discussed.
Toward an optimal convolutional neural network for traffic sign recognition

Convolutional Neural Networks (CNN) beat the human performance on German Traffic Sign Benchmark competition. Both the winner and the runner-up teams trained CNNs to recognize 43 traffic signs. However, both networks are not computationally efficient since they have many free parameters and they use highly computational activation functions. In this paper, we propose a new architecture that reduces the number of the parameters 27% and 22% compared with the two networks. Furthermore, our network uses Leaky Rectified Linear Units (ReLU) as the activation function that only needs a few operations to produce the result. Specifically, compared with the hyperbolic tangent and rectified sigmoid activation functions utilized in the two networks, Leaky ReLU needs only one multiplication operation which makes it computationally much more efficient than the two other functions. Our experiments on the Gertman Traffic Sign Benchmark dataset shows 0:6% improvement on the best reported classification accuracy while it reduces the overall number of parameters 85% compared with the winner network in the competition.
Mechanical forces stimulate endothelial microparticle generation via caspase-dependent apoptosis-independent mechanism

Microparticle release by vascular endothelium has been implicated in various cardiovascular pathologies. Ventilator-induced lung injury (VILI) is a life-threatening complication of mechanical ventilation at high tidal volumes associated with excessive mechanical stretch of pulmonary vascular endothelial cells. However, a role of VILI-relevant levels of cyclic stretch in microparticle generation by vascular endothelium remains unknown. We report microparticle formation by human pulmonary endothelial cells exposed to pathologic, but not physiologic, levels of mechanical stress. Stretch-induced microparticle generation was not affected by cell co-treatment with inflammatory agents thrombin or bacterial wall lipopolysacharide. Neither the basal nor the pathologic cyclic stretch-induced microparticle production was affected by Rho kinase and calpain inhibitors, but were instead abolished by caspase inhibitor. In contrast to lipopolysacharide, pathologic mechanical strain did not significantly induce apoptosis in pulmonary endothelial cells. These results show for the first time that mechanical strain of pulmonary endothelial cells at levels relevant to high tidal volume mechanical ventilation is a potent activator of microparticle formation, which requires caspase activity; however, this mechanism is independent of apoptosis. These results suggest a novel mechanism that may contribute to VILI-associated vascular dysfunction.
A new view of transcriptome complexity and regulation through the lens of local splicing variations

Alternative splicing (AS) can critically affect gene function and disease, yet mapping splicing variations remains a challenge. Here, we propose a new approach to define and quantify mRNA splicing in units of local splicing variations (LSVs). LSVs capture previously defined types of alternative splicing as well as more complex transcript variations. Building the first genome wide map of LSVs from twelve mouse tissues, we find complex LSVs constitute over 30% of tissue dependent transcript variations and affect specific protein families. We show the prevalence of complex LSVs is conserved in humans and identify hundreds of LSVs that are specific to brain subregions or altered in Alzheimer's patients. Amongst those are novel isoforms in the Camk2 family and a novel poison exon in Ptbp1, a key splice factor in neurogenesis. We anticipate the approach presented here will advance the ability to relate tissue-specific splice variation to genetic variation, phenotype, and disease. DOI: http://dx.doi. org/10.7554/eLife.11752. 001
An Analysis Of Internal Strains In UnidirectionalAnd Chopped Graphite Fibre CompositesBased On X-ray Diffraction And Micro RamanSpectroscopy Measurements

In this paper, the method for the determination of internal strains in polymer matrix composites from the strain measurements in the embedded sensors has been examined. Two types of strain sensors embedded in either chopped graphite fibre/epoxy matrix composite or unidirectional graphite fibre/polyimide matrix composite were investigated. For the chopped fibre composite, we used Kevlar49 fibres (~10μm in diameter) as strain sensors, while aluminium inclusions with diameters ranging from 1 to 20μm were embedded in the unidirectional composite. Both composite plates with embedded sensors were subjected to external loads generated by a four-point bending fixture. Strains inside the sensors were measured using either x-ray diffraction (XRD) or micro Raman spectroscopy (MRS). A model based on the equivalent inclusion method (EIM) was used to extract the internal strains in composites from the measured strains inside the embedded sensors. It has been demonstrated that the geometrical features and the material properties of the embedded strain sensors may affect the accuracy of the extraction of the composite internal strains. The average interactions between the sensors were found to have only a minor effect on the strain determination in a composite.
A phase I/II trial of vorinostat (SAHA) in combination with rituximab‐CHOP in patients with newly diagnosed advanced stage diffuse large B‐cell lymphoma (DLBCL): SWOG S0806

Loss of major histocompatibility Class II expression (MHCII) in diffuse large B‐cell lymphoma (DLBCL) correlates with decreased survival. MHCII transcription is in part regulated by histone acetylation. We tested the hypothesis that combination of histone deacetylase inhibitor (HDACI) with standard chemotherapy would improve outcomes in DLBCL in part through increased MHCII expression. S0806 was a single arm phase I/II trial of vorinostat given at 400 mg po daily on days 1‐9 (subsequently amended to days 1‐5 due to toxicity), combined with R‐CHOP given on day 3 of a 21‐day cycle for 8 cycles, with primary phase II endpoint of 2‐year progression free survival (PFS). With 72 evaluable patients, at median follow up of 3 years, 2‐year PFS estimate was 73%, and OS estimate was 86%. Considering that the regimen fell short of predefined efficacy improvement and was associated with high rates of febrile neutropenia (38%) and sepsis (19%), it cannot be recommended for general use. Consistent with our hypothesis, patients with low MCHII expression on S0806 had numerically superior outcomes compared to those from trial S0433 which did not use an HDACI, but the difference was not statistically significant. Current studies are focused on finding biomarkers of response to HDACI.
UVA1 impairs the repair of UVB‐induced DNA damage in normal human melanocytes

The exact correlation between melanoma and sun‐light is still a controversially debated issue. Although natural sunlight contains various ratios of UVA and UVB, most investigators so far focused on the effects of single solar wavebands and neglected possible interactions. Therefore, in this study primary human melanocytes of three donors were simultaneously exposed to physiologic doses of UVA1 and UVB. Effects on apoptosis were analysed using annexin V assays and cell death ELISAs, and effects on DNA damage were investigated using southwestern slot blots. While UVA1 did not influence UVB‐induced apoptosis, UVA1 impaired the repair of UVB‐induced cyclobutane pyrimidine dimers (CPD) as the amount of CPD was 1.8 times higher in UVA1 + UVB than in UVB only exposed melanocytes six hours after irradiation. We conclude that UVA1 might contribute to melanomagenesis as it partially inhibits the repair of UVB‐induced CPD in human melanocytes while it does not affect UVB‐mediated apoptosis.
A CCII‐based wide frequency range square waveform generator

In this paper, we propose a novel current‐mode solution suitable for the square waveform generation. The designed oscillator, which utilizes only two positive second‐generation current conveyors as active blocks, six resistors and a capacitor, is based on a current differentiation, instead of voltage integration, typical of developed solutions both in voltage‐mode and in current‐mode approaches, so avoiding circuit limitations due to the node saturation effects. The proposed circuit has been designed, as an integrated solution at transistor level, in a standard CMOS technology, with low‐voltage (± 1V) and low‐power (430µW) characteristics. Simulation results have confirmed the good circuit behaviour, also for working temperature drifts, showing good linearity in a wide oscillation frequency range, which can be independently adjusted through either capacitive (in the range pF − µF) or resistive (in the range M Ω–G Ω) external passive components. Waiting for the chip fabrication, preliminary measurements have been performed using a laboratory breadboard employing the CCII with AD844 commercial component and sample capacitors and resistors. The experimental results have shown good agreement with both simulations and theoretical expectations. Copyright © 2011 John Wiley & Sons, Ltd.
Chlorophyll-a Concentration Retrieval in the Optically Complex Waters of the St. Lawrence Estuary and Gulf Using Principal Component Analysis

Empirical methods based on band ratios to infer chlorophyll-a concentration by satellite do not perform well over the optically complex waters of the St. Lawrence Estuary and Gulf. Using a dataset of 93 match-ups, we explore an alternative method relying on empirical orthogonal functions (EOF) to develop an algorithm that relates the satellite-derived remote sensing reflectances to in situ chlorophyll-a concentration for the Sea-viewing Wide Field-of-view Sensor (SeaWiFS). Results show that an accuracy of 41% at retrieving chlorophyll-a concentration can be reached using the EOF method compared to 140% for the widely-used Ocean Chlorophyll 4 (OC4v4) empirical algorithm, 53% for the Garver-Siegel-Maritorena (GSM01) and 54% for the Generalized Inherent Optical Property (GIOP) semi-analytical algorithms. This result is possible because the EOF approach is able to extract region-specific radiometric features from the satellite remote sensing reflectances that are related to absorption properties of optical components (water, coloured dissolved organic matter and chlorophyll-a) using the visible SeaWiFS channels. The method could easily be used with other ocean-colour satellite sensors (e.g., MODIS, MERIS, VIIRS, OLCI) to extend the time series for the St. Lawrence Estuary and Gulf waters.