Miracle-dz/UniFAR-FTUs huggingface dataset:
Spatiotemporal Changes in Active Layer Thickness under Contemporary and Projected Climate in the Northern Hemisphere

AbstractVariability of active layer thickness (ALT) in permafrost regions is critical for assessments of climate change, water resources, and engineering applications. Detailed knowledge of ALT variations is also important for studies on ecosystem, hydrological, and geomorphological processes in cold regions. The primary objective of this study is therefore to provide a comprehensive 1971–2000 climatology of ALT and its changes across the entire Northern Hemisphere from 1850 through 2100. To accomplish this, in situ observations, the Stefan solution based on a thawing index, and the edaphic factor (E factor) are employed to calculate ALT. The thawing index is derived from (i) the multimodel ensemble mean of 16 models from phase 5 of the Coupled Model Intercomparison Project (CMIP5) over 1850–2005, (ii) three representative concentration pathways (RCP2.6, RCP4.5, and RCP8.5) for 2006–2100, and (iii) Climatic Research Unit (CRU) gridded observations for 1901–2014. The results show significant spatial variab.
Correlation Between Residual Displacement and Osteonecrosis of the Femoral Head Following Cannulated Screw Fixation of Femoral Neck Fractures

AbstractThe aim of the study was to introduce a new method for measuring the residual displacement of the femoral head after internal fixation and explore the relationship between residual displacement and osteonecrosis with femoral head, and to evaluate the risk factors associated with osteonecrosis of the femoral head in patients with femoral neck fractures treated by closed reduction and percutaneous cannulated screw fixation.One hundred and fifty patients who sustained intracapsular femoral neck fractures between January 2011 and April 2013 were enrolled in the study. All were treated with closed reduction and percutaneous cannulated screw internal fixation. The residual displacement of the femoral head after surgery was measured by 3-dimensional reconstruction that evaluated the quality of the reduction. Other data that might affect prognosis were also obtained from outpatient follow-up, telephone calls, or case reviews. Multivariate logistic regression analysis was applied to assess the intrinsic relationship between the risk factors and the osteonecrosis of the femoral head.Osteonecrosis of the femoral head occurred in 27 patients (18%). Significant differences were observed regarding the residual displacement of the femoral head and the preoperative Garden classification. Moreover, we found more or less residual displacement of femoral head in all patients with high quality of reduction based on x-ray by the new technique. There was a close relationship between residual displacement and ONFH.There exists limitation to evaluate the quality of reduction by x-ray. Three-dimensional reconstruction and digital measurement, as a new method, is a more accurate method to assess the quality of reduction. Residual displacement of the femoral head and the preoperative Garden classification were risk factors for osteonecrosis of the femoral head. High-quality reduction was necessary to avoid complications.
Wavelet-Based Compressed Sensing for SAR Tomography of Forested Areas

Synthetic aperture radar (SAR) tomography is a 3-D imaging modality that is commonly tackled by spectral estimation techniques. Thus, the backscattered power along the cross-range direction can be readily obtained by computing the Fourier spectrum of a stack of multibaseline measurements. In addition, recent work has addressed the tomographic inversion under the framework of compressed sensing, thereby recovering sparse cross-range profiles from a reduced set of measurements. This paper differs from previous publications, in that it focuses on sparse expansions in the wavelet domain while working with the second-order statistics of the corresponding multibaseline measurements. In this regard, we elaborate on the conditions under which this perspective is applicable to forested areas and discuss the possibility of optimizing the acquisition geometry. Finally, we compare this approach with traditional nonparametric ones and validate it by using fully polarimetric L-band data acquired by the Experimental SAR (E-SAR) sensor of the German Aerospace Center (DLR).
5 Bacteria of potential health concern

5.1 INTRODUCTION Organisms detected by the heterotrophic plate count (HPC) are ubiquitous in drinking-water. In order to assess the basis of confidence in existing measurements, particularly of the HPC, we have to reexamine the current role of potential waterborne bacteria in human disease. In this chapter, we therefore consider the following groups of bacteria of concern: • commensal bacteria; • recognized pathogens; • emerging bacteria; and • bioterrorist threat agents. The key factor in assessing the utility of the HPC will be whether it will provide a trigger for the successful investigation for these agents.
Association of Hepatitis C Virus Infection with Type II Diabetes in Ethiopia: A Hospital-Based Case-Control Study

Background. Chronic hepatitis C virus (HCV) has become the global “epidemic” with an estimated 123 million people currently infected worldwide. As the same time diabetes is also rapidly emerging as a global health care problem that threatens to reach pandemic levels by 2030. Objective. To investigate the magnitude of HCV infection in type II diabetes as compared to controls. Methodology. A case control study design was conducted at Jimma University Specialized Hospital from May to June 2010. A total of 604 study subjects were included in this study. Sociodemographic and risk factor data were collected by questionnaire. From serum sample, HCVAb screening was done by rapid antibody screening test. Liver functioning tests and total cholesterol tests were done by Dr. Lange LP 800 spectrophotometer. Results. The prevalence of HCV in type II diabetes and nondiabetic controls was 9.9% and 3.3%, respectively. In multivariate analysis, HCV seropositives have high risk of developing diabetes as compared with seronegatives (AOR = 2.997, 95% CI: (1.08, 8.315)). Conclusion. In this study, we found a positive association between past HCV infection and type II diabetes. As we did not perform HCV RNA test, we could not assess the association with HCV viremia.
Experimental Validation of Quantitative Coronary Arteriography for Determining Pressure-Flow Characteristics of Coronary Stenosis

The applicability of classic fluid dynamic equations to tapering stenoses in vasoactive, flexible coronary arteries in vivo and the validity of quantitative coronary arteriography was tested by comparing experimentally measured and x-ray-predicted pressure gradients at equal flows for left circumflex stenoses in five dogs chronically instrumented with a balloon. occluder, flow probe, and proximal and distal catheters for.injection of contrast media or recording distal coronary pressure. Arterial borders on cut-film orthogonal arteriograms were digitized and computer processed into a three-dimensional reconstruction of the stenosis. The total pressure gradient was calculated from stenosis dimensions using classic fluid dynamic equations. Over the full range of flow, the correlation of x-ray-predicted and experimentally measured pressure gradient for 51 separate stenoses was y = 1.11x ± 0.75, r = 0.95, p < 0.001, with a standard deviation about the regression line of 9.4 mm Hg and with 95% of x-ray-predicted values falling within ± 18.5 mm Hg of the experimentally measured values (95.% confidence limits). Mean experimentally measured and x-ray-predicted pressure gradients were 10.1 7.7 mm Hg (± SD) and 10.9 ± 5.6 mmn Hg at low flow and 48.2 ± 23.1 mm Hg and 55.8 ± 28.8 mm Hg at high flow, respectively. The mean difference was 3.9 ± 4.3 mm Hg at rest flow and 11.9 ± 10.5 mm Hg at high flow. For all data over the entire range of flows, the frequency distribution of differences between x-ray-predicted and experimentally measured gradients was a bell-shaped curve with a peak, or mean difference, of ± 4 mm Hg, a standard deviation of ± 9.8 mm Hg and 95% confidence limits for individual values of ± 19.6 mm Hg. These data demonstrate the validity of applying classic fluid dynamic theory to tapering stenoses in vivo. Quantitative coronary arteriography on the average or in individual instances approximately predicts the pressure gradient-flow characteristics of coronary arterial stenoses in intact animals. However, as indicated by the above measures of variability, there is considerable scatter in x-ray predictions that limits its applicability to individual clinical cases. We believe that this scatter is a result of difficulties in visually tracing arterial borders on arteriograms and can most likely be reduced by automatic border recognition techniques.
A Robot Control System Integrating Reactive Control, Reasoning, and Execution Monitoring

We present a robot control system that integrates robust reactive control with efficient reasoning about actions and execution monitoring. On the reactive level, the robot is controlled using a hierarchy of low-level behaviors. On the high level, a logical representation of the world enables the robot to reason about the state of the world and to plan action sequences. If the execution of an action fails, probabilistic information on the state of the world based on the robot’s sensors are used to update the logic-based representation of the world. High-level reasoning then allows to infer possible explanations and to recover from the failure situation. The proposed system is evaluated using a set of realistic office-delivery scenarios.
Antidepressant activity: contribution of brain microdialysis in knock-out mice to the understanding of BDNF/5-HT transporter/5-HT autoreceptor interactions

Why antidepressants vary in terms of efficacy is currently unclear. Despite the leadership of selective serotonin reuptake inhibitors (SSRIs) in the treatment of depression, the precise neurobiological mechanisms involved in their therapeutic action are poorly understood. A better knowledge of molecular interactions between monoaminergic system, pre- and post-synaptic partners, brain neuronal circuits and regions involved may help to overcome limitations of current treatments and identify new therapeutic targets. Intracerebral in vivo microdialysis (ICM) already provided important information about the brain mechanism of action of antidepressants first in anesthetized rats in the early 1990s, and since then in conscious wild-type or knock-out mice. The principle of ICM is based on the balance between release of neurotransmitters (e.g., monoamines) and reuptake by selective transporters [e.g., serotonin transporter for serotonin 5-hydroxytryptamine (5-HT)]. Complementary to electrophysiology, this technique reflects pre-synaptic monoamines release and intrasynaptic events corresponding to ≈80% of whole brain tissue content. The inhibitory role of serotonergic autoreceptors infers that they limit somatodendritic and nerve terminal 5-HT release. It has been proposed that activation of 5-HT1A and 5-HT1B receptor sub-types limits the antidepressant-like activity of SSRIs. This hypothesis is based partially on results obtained in ICM experiments performed in naïve, non-stressed rodents. The present review will first remind the principle and methodology of ICM performed in mice. The crucial need of developing animal models that display anxiety and depression-like behaviors, neurochemical and brain morphological phenotypes reminiscent of these mood disorders in humans, will be underlined. Recently developed genetic mouse models have been generated to independently manipulate 5-HT1A auto and heteroreceptors and ICM helped to clarify the role of the pre-synaptic component, i.e., by measuring extracellular levels of neurotransmitters in serotonergic nerve terminal regions and raphe nuclei. Finally, we will summarize main advantages of using ICM in mice through recent examples obtained in knock-outs (drug infusion through the ICM probe allows the search of a correlation between changes in extracellular neurotransmitter levels and antidepressant-like activity) or alternatives (infusion of a small-interfering RNA suppressing receptor functions in the mouse brain). We will also focus this review on post-synaptic components such as brain-derived neurotrophic factor in adult hippocampus that plays a crucial role in the neurogenic and anxiolytic/antidepressant-like activity of chronic SSRI treatment. Limitations of ICM will also be considered.
Effects of oseltamivir treatment on duration of clinical illness and viral shedding and household transmission of influenza virus.

BACKGROUND Large clinical trials have demonstrated the therapeutic efficacy of oseltamivir against influenza. We assessed the indirect effectiveness of oseltamivir in reducing secondary household transmission in an incident cohort of influenza index patients and their household members. METHODS We recruited index outpatients whose rapid test results were positive for influenza from February through September 2007 and January through September 2008. Household contacts were followed up for 7-10 days during 3-4 home visits to monitor symptoms. Nose and throat swabs were collected and tested for influenza by reverse-transcription polymerase chain reaction or viral culture. RESULTS We followed up 384 index patients and their household contacts. Index patients who took oseltamivir within 24 h of symptom onset halved the time to symptom alleviation (adjusted acceleration factor, 0.56; 95% confidence interval [CI], 0.42-0.76). Oseltamivir treatment was not associated with statistically significant reduction in the duration of viral shedding. Household contacts of index patients who had taken oseltamivir within 24 h of onset had a nonstatistically significant lower risk of developing laboratory-confirmed infection (adjusted odds ratio, 0.54; 95% CI, 0.11-2.57) and a marginally statistically significant lower risk of clinical illness (adjusted odds ratio, 0.52; 95% CI, 0.25-1.08) compared with contacts of index patients who did not take oseltamivir. CONCLUSIONS Oseltamivir treatment is effective in reducing the duration of symptoms, but evidence of household reduction in transmission of influenza virus was inconclusive.
PHARMACOKINETIC AND TISSUE DISTRIBUTION STUDIES OF THE PHOTOSENSITIZER bis(DI‐ISOBUTYLOCTADECYLSILOXY)SILICON 2,3‐NAPHTHALOCYANINE (isoBOSINC) IN NORMAL AND TUMOR‐BEARING RATS

Abstract Bis(di‐isobutyl octadecylsiloxy)silicon 2,3‐naphthalocyanine (isoBOSINC) is a representative of a group of naphthalocyanine derivatives with spectral and photophysical properties that make them attractive candidates for photodynamic therapy (PDT). Tissue distributions were studied in normal and in tumor‐bearing rats as a function of time following intravenous injection of isoBOSINC as a suspension in 10% Tween 80 in saline. The dose studied was 0.25 mg/kg of body weight. The compound isoBOSINC was isolated from several tissues and organs, as well as tumors and peritumoral muscles and skin, and quantitated by a high‐performance liquid chromatographic technique. The tumor model, an N‐(4‐[5‐nitro‐2‐furyl)‐2‐thiazolyl)formamide (FANFT)‐induced urothelial cell carcinoma, was transplanted into the hind legs of Fischer 344 rats. The dye was retained in tumors at higher concentrations than in all tissues and organs examined, except for spleen and liver. The highest concentration ratio of dye in tumor versus peritumoral muscle (24.5) occurred 9 h after injection. Serum clearance of isoBOSINC showed similar kinetic behavior for both groups of rats, with a t1/2 of elimination of ∼ 10 h. At 7 and 14 days postinjection, the levels of dye found in testes were generally higher than in most other tissues, except spleen and liver. Concentrations of isoBOSINC were either very low or not detectable in rat brain. Trace amounts of the dye were excreted in the urine, and by day 14 approximately 17% of the dose was accounted for in the feces. The significant levels of the drug in tumors, as well as the excellent ratios of tumor‐to‐muscle concentration observed, have promising implications for PDT of tumors.
Common foot problems in diabetic foot clinic.

OBJECTIVE To study common foot problems presented in diabetic foot clinic. MATERIAL AND METHOD A retrospectively review of out patient department records and diabetic foot evaluation forms of patients who visited the diabetic foot clinic at King Chulalongkorn Memorial Hospital between 2004 and 2006. RESULTS Of all diabetic patients, 70 men and 80 women with the average age of 63.8 years were included in this study. About 32% of all reported cases had lower extremity amputation in which the toe was the most common level. Foot problems were evaluated and categorized in four aspects, dermatological, neurological, musculoskeletal, and vascular, which were 67.30%, 79.3%, 74.0%, and 39.3% respectively. More than half of the patients had skin dryness, nail problem and callus formation. Fifty six percent had the abnormal plantar pressure area, which was presented as callus. The great toe was the most common site of callus formation, which was correlated with gait cycle. The current ulcer was 18.8%, which was presented mostly at heel and great toe. Three-fourth of the patients (75.3%) had lost protective sensation, measured by the 5.07 monofilament testing. The most common problem found in musculoskeletal system was limited motion of the joint (44.0%). Claw toe or hammer toe were reported as 32.0% whereas the other deformities were bunnion (12.0%), charcot joint (6.0%) and flat feet (5.3%). The authors classified patients based on category risk to further lower extremity amputation into four groups. Forty-seven percent had highest risk for having further amputation because they had lost protective sensation from monofilament testing, previous current ulcer, or history of amputation. Only half of the patients had previous foot care education. CONCLUSION Multidisciplinary diabetic foot care including patient education (proper foot care and footwear), early detection, effective management of foot problems, and scheduled follow-up must be emphasized to prevent diabetes-related lower extremities amputation.
Sonographic Evaluation of Cervical Lymphadenopathy; Comparison of Metastatic and Reactive Lymph Nodes in Patients With Head and Neck Squamous Cell Carcinoma Using Gray Scale and Doppler Techniques

Background: Cervical lymphadenopathy could be seen in several pathologic processes. An accurate differentiation between these conditions is of utmost importance to select an appropriate therapy and assess the prognosis. Gray scale and Doppler are appropriate sonographic techniques for evaluating internal and external features of lymph nodes. Although, various criteria have been proposed to differentiate metastatic lymph nodes from benign ones, the most valuable and specific sonographic features are still under dispute. Objectives: The present study was designed to determine valuable sonographic features for differentiating metastasis from benign nodes using gray scale and Doppler sonography. Patients and Methods: A prospective diagnostic study was performed on 63 patients with head and neck squamous cell carcinoma (SCC) treated and referred to surgery clinic of Hazrat Rasoul Akram hospital from November 2010 to June 2012 with complaint of palpable cervical lymph node. All patients’ necks were scanned multidirectionally by gray-scale and Doppler techniques. After sonography, lymph nodes were biopsied and investigated to find out whether they were metastatic or reactive. Finally, demographic, sonographic and pathologic data were statistically analyzed by SPSS ver. 16 software using t-test, a nonparametric test and ROC analysis. Ninety five percent confidence interval was considered for all parameters. Results: The study included 41 males and 22 females with a mean age of 57.56 ± 13.79 years. The number of metastatic lymph nodes was 47, while the remaining 16 were reactive. There were significant differences in length (P = 0.037), width (P = 0.001), resistance index (P < 0.001), pulsatility index (P < 0.001) and systolic velocity (P < 0.001) of metastatic and reactive lymph nodes. Cut points for resistive and pulsatility indexes and systolic velocity were calculated as 0.695, 1.35 and 16.5, respectively. The most valuable factor for defining a lymph node as metastatic was circulation pattern with accuracy, sensitivity and specificity of 94%, 85% and 93%, respectively. Conclusion: Gray scale sonography in combination with Doppler sonography could be a trustworthy technique in differentiating metastatic lymph nodes from reactive ones. Although, circulation pattern had a higher diagnostic accuracy in the present study, combination of sonographic characteristics could be more beneficial in differentiating metastatic cervical nodes from reactive ones.
Comparison of Minimum Current Estimate and Dipole Modeling in the Analysis of Simulated Activity in the Human Visual Cortices

Magnetoencephalographic(MEG) data are typically interpreted using source models because of the nonunique inverse problem. Although single current dipoles, adequately representing local active areas, can be identified accurately, multiple and overlapping sources form a challenge for MEG modeling. We tested the performances of multidipole modeling and minimum current estimate (MCE) in the analysis of complicated source configurations. Simulated current sources were placed to physiologically meaningful areas of the human visual cortices. Ten volunteers from the laboratory staff analyzed four different simulations with both dipole modeling and MCE without prior information of the sources. In general, the same sources were found using both modeling methods. The subjects tended to report more false sources with MCE than with dipole model, in part due to their inexperience with the method. Dipole model was more accurate than MCE both in time and space for nonsimultaneous sources but both methods performed similarly when sources overlapped in time. For all source configurations, considerably smaller source amplitudes were reported with MCE than with dipole model.
The Alleviation of Heat Damage to Photosystem II and Enzymatic Antioxidants by Exogenous Spermidine in Tall Fescue

Tall fescue (Festuca arundinacea Schreb) is a typical cool-season grass that is widely used in turf and pasture. However, high temperature as an abiotic stress seriously affects its utilization. The objective of this study was to explore the effect of spermidine (Spd) on heat stress response of tall fescue. The samples were exposed to 22°C (normal condition) or 44°C (heat stress) for 4 h. The results showed that exogenous Spd partially improved the quality of tall fescue leaves under normal temperature conditions. Nevertheless, after heat stress treatment, exogenous Spd significantly decreased the electrolyte leakage of tall fescue leaves. Spd also profoundly reduced the H2O2 and O2⋅- content and increased antioxidant enzymes activities. In addition, PAs can also regulate antioxidant enzymes activities including SOD, POD, and APX which could help to scavenge ROS. Moreover, application of Spd could also remarkably increase the chlorophyll content and had a positive effect on the chlorophyll α fluorescence transients under high temperature. The Spd reagent enhanced the performance of photosystem II (PSII) as observed by the JIP-test. Under heat stress, the Spd profoundly improved the partial potentials at the steps of energy bifurcations (PIABS and PItotal) and the quantum yields and efficiencies (φP0, δR0, φR0, and γRC). Exogenous Spd could also reduce the specific energy fluxes per QA- reducing PSII reaction center (RC) (TP0/RC and ET0/RC). Additionally, exogenous Spd improved the expression level of psbA and psbB, which encoded the proteins of PSII core reaction center complex. We infer that PAs can stabilize the structure of nucleic acids and protect RNA from the degradation of ribonuclease. In brief, our study indicates that exogenous Spd enhances the heat tolerance of tall fescue by maintaining cell membrane stability, increasing antioxidant enzymes activities, improving PSII, and relevant gene expression.