Miracle-dz/UniFAR-FTUs huggingface dataset:
Indigenous lactobacilli strains of food and human sources reverse enteropathogenic E. coli O26:H11-induced damage in intestinal epithelial cell lines: effect on redistribution of tight junction proteins.

The aim of the study was to investigate the neutralizing effect of lactobacilli isolated from indigenous food and human sources on enteropathogenic Escherichia coli (EPEC) O26 : H11-induced epithelial barrier dysfunction in vitro. This was assessed by transepithelial electrical resistance (TEER) and permeability assays using intestinal cell lines, HT-29 and Caco-2. Furthermore, the expression and distribution of tight junction (TJ) proteins were analysed by qRT-PCR and immunofluorescence assay, respectively. The nine strains used in the study were from different species viz. Lactobacillus fermentum, Lactobacillushelveticus, Lactobacillus salivarius and Lactobacillus plantarum. All strains were able to reverse the decrease in TEER and corresponding increase in permeability across E. coli-infected monolayers. Maximum reversal was observed after 18 h [up to 93.8±2.0 % by L. rhamnosus GG followed by L. fermentum IIs11.2 (92.6±2.2 %) and L. plantarum GRI-2 (91.9±0.9 %)] of lactobacilli exposure following EPEC O26 : H11 infection. All strains were able to redistribute the TJ proteins to the cell periphery either partially or completely. Moreover, L. helveticus FA-7 was also able to significantly increase the mRNA expression of ZO-1 and claudin-1 (2.5-fold and 3.0-fold, respectively; P<0.05). The rapid reversal observed by these strains could be mostly because of the redistribution rather than increased mRNA expression of TJ proteins. In conclusion, L. helveticus FA-7, L. fermentum FA-1 and L. plantarum GRI-2 were good in all the aspects studied, and the other strains were good in some aspects. L. helveticus FA-7, L. fermentum FA-1 and L. plantarum GRI-2 can therefore be used for potential therapeutic purpose against intestinal epithelial dysfunction.
Values and behavior: Validating the refined value theory in Russia

Researchers recently introduced a refined theory of 19 basic human values. They demonstrated its utility and discriminant validity through associations with attitudes and beliefs, but not with behaviors. We assess the discriminant and predictive validity of the theory by examining associations of each value with everyday behaviors in a Russian sample. Two hundred sixty-six respondents reported their values and the frequency with which they performed each of the 85 everyday behaviors during the past year. We derived indexes of 19 latent value factors and of 19 latent behavior factors using confirmatory factor analysis. A confirmatory multidimensional scaling analysis arrayed the values, excepting benevolence, on the circular motivational continuum of the theory. Structural equation modeling analyses supported the discriminant and predictive validity of the theory. Of the 19 values, 18 correlated more positively with the behavior chosen a priori as likely to express it than with any other behavior, and all values correlated negatively with behaviors chosen to express motivationally opposed values. The patterns of correlation between the values and behaviors approximated the sinusoid curve implied by the motivational continuum of values in almost all cases. The study suggests that the same motivational compatibilities and conflicts that structure value relations largely organize relations among value-expressive behaviors. The study examines moderation of value–behavior relations by gender and tests the normative pressure explanation of variation in the strength of value–behavior relations across value domains. Copyright © 2014 John Wiley & Sons, Ltd.
Hip3 Interacts with the HIRA Proteins Hip1 and Slm9 and Is Required for Transcriptional Silencing and Accurate Chromosome Segregation*

The fission yeast HIRA proteins Hip1 and Slm9 are members of an evolutionarily conserved family of histone chaperones that are implicated in nucleosome assembly. Here we have used single-step affinity purification and mass spectrometry to identify factors that interact with both Hip1 and Slm9. This analysis identified Hip3, a previously uncharacterized 187-kDa protein, with similarity to S. cerevisiae Hir3. Consistent with this, cells disrupted for hip3+ exhibit a range of growth defects that are similar to those associated with loss of Hip1 and Slm9. These include temperature sensitivity, a cell cycle delay, and synthetic lethality with cdc25-22. Furthermore, genetic analysis also indicates that disruption of hip3+ is epistatic with mutation of hip1+ and slm9+. Mutation of hip3+ alleviates transcriptional silencing at several heterochromatic loci, including in the outer (otr) centromeric repeats, indicating that Hip3 is required for the integrity of pericentric heterochromatin. As a result, loss of Hip3 function leads to high levels of minichromosome loss and an increased frequency of lagging chromosomes during mitosis. Importantly, the function of Hip1, Slm9, and Hip3 is not restricted to constitutive heterochromatic loci, since these proteins also repress the expression of a number of genes, including the Tf2 retrotransposons.
The Worldwide Variation in Avian Clutch Size across Species and Space

Traits such as clutch size vary markedly across species and environmental gradients but have usually been investigated from either a comparative or a geographic perspective, respectively. We analyzed the global variation in clutch size across 5,290 bird species, excluding brood parasites and pelagic species. We integrated intrinsic (morphological, behavioural), extrinsic (environmental), and phylogenetic effects in a combined model that predicts up to 68% of the interspecific variation in clutch size. We then applied the same species-level model to predict mean clutch size across 2,521 assemblages worldwide and found that it explains the observed eco-geographic pattern very well. Clutches are consistently largest in cavity nesters and in species occupying seasonal environments, highlighting the importance of offspring and adult mortality that is jointly expressed in intrinsic and extrinsic correlates. The findings offer a conceptual bridge between macroecology and comparative biology and provide a global and integrative understanding of the eco-geographic and cross-species variation in a core life-history trait.
An Introduction to the Event-Related Potential Technique

The event-related potential (ERP) technique in cognitive neuroscience allows scientists to observe human brain activity that reflects specific cognitive processes. In An Introduction to the Event-Related Potential Technique, Steve Luck offers the first comprehensive guide to the practicalities of conducting ERP experiments in cognitive neuroscience and related fields, including affective neuroscience and experimental psychopathology. The book can serve as a guide for the classroom or the laboratory and as a reference for researchers who do not conduct ERP studies themselves but need to understand and evaluate ERP experiments in the literature. It summarizes the accumulated body of ERP theory and practice, providing detailed, practical advice about how to design, conduct, and interpret ERP experiments, and presents the theoretical background needed to understand why an experiment is carried out in a particular way. Luck focuses on the most fundamental techniques, describing them as they are used in many of the world's leading ERP laboratories. These techniques reflect a long history of electrophysiological recordings and provide an excellent foundation for more advanced approaches. The book also provides advice on the key topic of how to design ERP experiments so that they will be useful in answering questions of broad scientific interest. This reflects the increasing proportion of ERP research that focuses on these broader questions rather than the "ERPology" of early studies, which concentrated primarily on ERP components and methods. Topics covered include the neural origins of ERPs, signal averaging, artifact rejection and correction, filtering, measurement and analysis, localization, and the practicalities of setting up the lab.
Oscillatory Behavior of Neutrophils under Opposing Chemoattractant Gradients Supports a Winner-Take-All Mechanism

Neutrophils constitute the largest class of white blood cells and are the first responders in the innate immune response. They are able to sense and migrate up concentration gradients of chemoattractants in search of primary sites of infection and inflammation through a process known as chemotaxis. These chemoattractants include formylated peptides and various chemokines. While much is known about chemotaxis to individual chemoattractants, far less is known about chemotaxis towards many. Previous studies have shown that in opposing gradients of intermediate chemoattractants (interleukin-8 and leukotriene B4), neutrophils preferentially migrate toward the more distant source. In this work, we investigated neutrophil chemotaxis in opposing gradients of chemoattractants using a microfluidic platform. We found that primary neutrophils exhibit oscillatory motion in opposing gradients of intermediate chemoattractants. To understand this behavior, we constructed a mathematical model of neutrophil chemotaxis. Our results suggest that sensory adaptation alone cannot explain the observed oscillatory motion. Rather, our model suggests that neutrophils employ a winner-take-all mechanism that enables them to transiently lock onto sensed targets and continuously switch between the intermediate attractant sources as they are encountered. These findings uncover a previously unseen behavior of neutrophils in opposing gradients of chemoattractants that will further aid in our understanding of neutrophil chemotaxis and the innate immune response. In addition, we propose a winner-take-all mechanism allows the cells to avoid stagnation near local chemical maxima when migrating through a network of chemoattractant sources.
Digestive utilization of goat and cow milk fat in malabsorption syndrome

We studied the effects of goat and cow milk fat on the digestive utilization of this nutrient and on some of the biochemical parameters that are related to the metabolism of lipids, using rats with a resection of 50% of the distal small intestine and control animals (transected). The fat content in all the diets was 10% but the lipid quality was varied: the standard diet was based on olive oil, while the other two diets included fat obtained from lyophilized goat milk and cow milk, respectively. The digestive utilization of the fat was lower in the resected animals than in the transected ones for all three diets studied. In both resected and transected animals, the apparent digestibility coefficient (ADC) of the fat was greater with the standard diet (olive oil) than with diets whose fat content was provided by goat or cow milk. The digestive utilization of the fat was greater in the transected and resected rats receiving a diet of goat's milk (rich in medium-chain triglycerides) than those given a cow-milk-based diet, and more closely approached the values obtained for olive oil. The consumption of goat milk reduced levels of cholesterol while levels of triglycerides, HDL, GOT and GPT remained within the normal ranges, for both transected and resected animals. The advantageous effect of goat milk on the metabolism of lipids with respect to cow milk suggests that the former should be included in the diet in cases of malabsorption syndrome.
Analysing teacher professional development through professional dialogue: an investigation into a university–school partnership project on enquiry learning

Although extensive research has been carried out on university–school partnerships, there is a lack of evidence and discussion about how universities or external parties may promote professional development through professional dialogue in schools. Based on a two-year university–school partnership project on enquiry learning, this study aims at empowering teachers to cultivate students’ ability in enquiry learning through professional dialogue. The findings show that the university support team created the fundamental basis for professional dialogue by conveying information regarding enquiry learning, introducing new pedagogies, conducting lesson observations and reviewing school-based teaching materials. In addition, the support team sustained the dialogue by promoting collaborative work, including analysing students’ assignments and configuring ways to address diverse student needs with the teachers. Through professional dialogue, the teachers in this study were able to familiarise themselves with enquiry learning and gain confidence in adopting new pedagogies to facilitate student learning.
Prophylactic Creatine Administration Mediates Neuroprotection in Cerebral Ischemia in Mice

Creatine mediates remarkable neuroprotection in experimental models of amyotrophic lateral sclerosis, Huntington's disease, Parkinson's disease, and traumatic brain injury. Because caspase-mediated pathways are shared functional mechanistic components in these diseases, as well as in ischemia, we evaluated the effect of creatine supplementation on an experimental stroke model. Oral creatine administration resulted in a remarkable reduction in ischemic brain infarction and neuroprotection after cerebral ischemia in mice. Postischemic caspase-3 activation and cytochrome c release were significantly reduced in creatine-treated mice. Creatine administration buffered ischemia-mediated cerebral ATP depletion. These data provide the first direct correlation between the preservation of bioenergetic cellular status and the inhibition of activation of caspase cell-death pathways in vivo. An alternative explanation to our findings is that creatine is neuroprotective through other mechanisms that are independent of mitochondrial cell-death pathways, and therefore postischemic ATP preservation is the result of tissue spearing. Given its safety record, creatine might be considered as a novel therapeutic agent for inhibition of ischemic brain injury in humans. Prophylactic creatine supplementation, similar to what is recommended for an agent such as aspirin, may be considered for patients in high stroke-risk categories.
TRANSFORMASI MASYARAKAT PETANI MRANGGEN MENUJU MASYARAKAT INDUSTRI

Penelitian ini bertujuan untuk mendeskripsikan dan menganalisis (1) bagaimana pertanian masyarakat menghadapi industrialisasi yang terjadi di Mranggen, (2) bagaimana perubahan nilai-nilai sosial-religius petani, (3) apakah agama masih dianggap sebagai publik hidup dan kehidupan pribadi dalam masyarakat. Hasil adalah bahwa: pertama, industrialisasi di Mranggen dimulai sejak tahun 1995 dengan pembentukan berbagai industri. Untuk petani, industrialisasi adalah berkat karena tanahnya lebih mahal dan dia bisa pergi haji dengan menjual tanahnya. Untuk pengangguran dan perempuan, itu adalah untuk mendapatkan pekerjaan. Untuk masyarakat secara seorang pedagang baru, itu adalah kesempatan untuk menjajakan barang dagangan. untuk lokal pemerintah, itu adalah sebagai kesuksesan pembangunan ekonomi dan pendapatan daerah. Kedua, transformasi masyarakat menjadi masyarakat industri membawa perubahan di Mranggen: in infrastruktur, pembangunan perumahan, serta modernisasi pertanian, sehingga mempersempit bidang pekerja pertanian. Ketiga, nilai pertumbuhan baru di masyarakat industri, agama masih memiliki tempat suci di depan umum hidup dan kehidupan pribadi
Adaptive Responses to Progressive Drought Stress in Two Populus cathayana Populations

The young, vegetatively propagated cuttings of Populus cathayana Rehder were exposed to a progressive drought stress for 12 weeks in a greenhouse to characterize the physiological and biochemical basis of drought adaptation in woody plants. Two contrasting populations were employed in our study, which were from the wet and dry climate regions in western China, respectively. The results showed that the adaptive responses of P. cathayana to drought were affected by drought intensity and poplar genotype (population). The progressive drought stress significantly inhibited plant growth, increased carotenoid contents and, at the same time, accumulated soluble sugars and free proline in the plants of both populations tested. On the other hand, the gradually increasing drought also induced antioxidative systems including the increase of the activities of superoxide dismutase (SOD) and guaiacol peroxidase (POD). Moreover, there were different responses to progressive drought stress between the two contrasting populations. Compared with the wet climate population, the dry climate population had lower shoot height and growth rate, higher free proline content, and more efficient photoprotective system (such as higher carotenoid content and Car/Chl) and antioxidant system (such as higher POD activity), as a result of drought stress. These results suggest that the dry climate population possesses better drought tolerance than the wet climate population. The differences in drought tolerance may be closely related with efficient photoprotective system, accumulation of the osmoprotectant proline as well as the increased capacity of the antioxidative system to scavenge reactive oxygen species, and the consequent suppressed level of lipid peroxidation under drought conditions.
Developing, Piloting, and Validating an Instrument to Measure Young Learners’ Aptitude

This study aimed to develop, pilot, and validate an aptitude test for Hungarian learners of English. A literature review on the construct and tests of aptitude is followed by two parts: a pilot phase on the development of a new aptitude test and a main study involving 419 12-year-old children in 10 schools. Data were collected on the aptitude test, English proficiency tests, and a measure of learners’ motivation. The article explores how aptitude scores relate to learners’ performances on the proficiency measure, motivation, gender, school achievements, and grades in English. The results of a multiple-regression analysis indicate that the variable of language aptitude explained over 20% of the variation in English language performance, thus proving to be the best predictor of outcomes.
Forced wetting and hydrodynamic assist

Wetting is a prerequisite for coating a uniform layer of liquid onto a solid. Wetting failure and air entrainment set the ultimate limit to coating speed. It is well known in the coating art that this limit can be postponed by manipulating the coating flow to generate what has been termed “hydrodynamic assist,” but the underlying mechanism is unclear. Experiments have shown that the conditions that postpone air entrainment also reduce the apparent dynamic contact angle, suggesting a direct link, but how the flow might affect the contact angle remains to be established. Here, we use molecular dynamics to compare the outcome of steady forced wetting with previous results for the spontaneous spreading of liquid drops and apply the molecular-kinetic theory of dynamic wetting to rationalize our findings and place them on a quantitative footing. The forced wetting simulations reveal significant slip at the solid-liquid interface and details of the flow immediately adjacent to the moving contact line. Our results confirm that the local, microscopic contact angle is dependent not simply only on the velocity of wetting but also on the nature of the flow that drives it. In particular, they support an earlier suggestion that during forced wetting, an intense shear stress in the vicinity of the contact line can assist surface tension forces in promoting dynamic wetting, thus reducing the velocity-dependence of the contact angle. Hydrodynamic assist then appears as a natural consequence of wetting that emerges when the contact line is driven by a strong and highly confined flow. Our theoretical approach also provides a self-consistent model of molecular slip at the solid-liquid interface that enables its magnitude to be estimated from dynamic contact angle measurements. In addition, the model predicts how hydrodynamic assist and slip may be influenced by liquid viscosity and solid-liquid interactions.
Role of external irradiation in high-risk resected colon cancer.

BACKGROUND/AIM The best therapeutic modality for colon cancer "one of the most common malignancies of human being" is surgical resection of primary tumor. Adjuvant chemotherapy can help surgery to have a higher control and survival rate in high-risk resected patients, but the role of radiation therapy is the place of debate. This study was carried out to evaluate the possible role of adjuvant radiotherapy in such cases. MATERIALS AND METHODS This retrospective trial evaluated 65 eligible patients with surgically resected high-risk colon carcinoma (serosal and/or lymph node involvement), from May 1986 to February 2000. The patients were categorized into two groups. The first group was treated with chemotherapy alone and the other with chemo-radiotherapy. Chemotherapy included 5.FU 500 mg/m2sub/5days for 6-8 courses and radiotherapy consisted 45-55 Gy with 1.5-2 Gy/fraction. Minimum follow-up was 36 months. RESULTS Mean event-free survival was 140 and 101 months in chemotherapy and combined-therapy groups, respectively (P = 0.099). Local recurrence rate was detected as 9.7% in the chemotherapy arm and 23.5% in the combined-therapy arm (P > 0.1). Treatment-related morbidity and mortality has been significantly higher in the radiation arm (P < 0.001). CONCLUSION Postoperative external radiation as adjuvant treatment does not improve local control of the patients with colon carcinoma.
Index Cohesive Force Analysis Reveals That the US Market Became Prone to Systemic Collapses Since 2002

Background The 2007–2009 financial crisis, and its fallout, has strongly emphasized the need to define new ways and measures to study and assess the stock market dynamics. Methodology/Principal Findings The S&P500 dynamics during 4/1999–4/2010 is investigated in terms of the index cohesive force (ICF - the balance between the stock correlations and the partial correlations after subtraction of the index contribution), and the Eigenvalue entropy of the stock correlation matrices. We found a rapid market transition at the end of 2001 from a flexible state of low ICF into a stiff (nonflexible) state of high ICF that is prone to market systemic collapses. The stiff state is also marked by strong effect of the market index on the stock-stock correlations as well as bursts of high stock correlations reminiscence of epileptic brain activity. Conclusions/Significance The market dynamical states, stability and transition between economic states was studies using new quantitative measures. Doing so shed new light on the origin and nature of the current crisis. The new approach is likely to be applicable to other classes of complex systems from gene networks to the human brain.