Miracle-dz/UniFAR-FTUs huggingface dataset:
Thunbergia laurifolia extract ameliorates cognitive and emotional deficits in olfactorectomized mice

Abstract Context: Thunbergia laurifolia Lindl. (Acanthaceae) is a Thai medicinal plant used for the detoxification of poison which is likely to be beneficial for the treatment of cognitive deficits including Alzheimer's disease. Objective: To elucidate the effects of Thunbergia laurifolia leaf extract (TLL) on cognitive dysfunction and depression-like behavior in olfactory bulbectomized mice (OBX). Materials and methods: OBX mice were treated daily with TLL at the dose of 250 and 500 mg/kg, tacrine, and imipramine, on the day after 10 d of OBX operation. The effects of TLL on cognitive and depression-like behavior of the animals were analyzed. After completing behavioral experiments, the expression levels of cholinergic marker genes encoding ChAT and muscarinic M1 receptor were quantitatively analyzed. Results: TLL and tacrine reduced OBX-induced cognitive deficits in the object recognition test (ORT) with the time spent for the novel object two times longer than that of the familiar object. Moreover, TLL at the dose of 500 mg/kg and imipramine ameliorated depression-like behavior in the tail suspension test (TST) by reducing the duration of immobility from 25.18% to 3.16% and from 25.18% to 6.48%, respectively. TLL at the dose of 250 and 500 mg/kg reversed the OBX-induced down-regulation of ChAT mRNA expression in the hippocampus from 0.12 to 0.17 and 0.24, respectively, while the down-regulation of mRNA expression of muscarinic M1 receptor was also reversed by TLL from 0.23 to 0.38 and 0.48, respectively. Conclusions: TLL ameliorates non-spatial short-term memory deficits in OBX mice, and has the potential to exhibit an antidepressant-like action.
TRANSPORT OF THE DOPAMINE D 2 AGONIST PRAMIPEXOLE BY RAT ORGANIC CATION TRANSPORTERS OCT 1 AND OCT 2 IN KIDNEY

We investigated the mechanism of renal tubular secretion of the dopamine D2 receptor agonist pramipexole in rats, focusing on organic cation transporters 1 and 2. The uptake of [C]pramipexole by Xenopus oocytes injected with complementary RNA of either rat organic cation transporter (rOCT) 1 or rOCT2 was significantly higher than that by water-injected oocytes: the kinetic parameters, Km and Vmax, of pramipexole uptake were 49.5 M and 234 pmol/60 min/oocyte for rOCT1, and 16.9 M and 12.8 pmol/60 min/oocyte for rOCT2. Pramipexole was taken up into kidney slices in a timeand concentration-dependent manner, and Eadie-Hofstee plots revealed the involvement of two saturable components. The kinetic parameters, Km1 and Vmax1, of the high-affinity component were 12.9 M and 10.7 nmol/15 min/g kidney, respectively. The uptake of [C]pramipexole by rOCT1, rOCT2, and kidney slices was inhibited by procainamide and corticosterone, which are selective inhibitors of rOCT1 and rOCT2, respectively. The IC50 values of procainamide and corticosterone for the uptake of [C]pramipexole by rOCT1, rOCT2, and kidney slices were 7.7, 167.0, and 47.0 M and 163.7, 10.7, and 47.7 M, respectively. These results demonstrate that both rOCT1 and rOCT2 are involved in the renal uptake of pramipexole across the basolateral membrane of the proximal tubular
Quartz Solubility in the Two‐Phase Region of the NaCl‐H2O System: An Experimental Study With Application to the Piccard Hydrothermal Field, Mid‐Cayman Rise

Hydrothermal experiments were performed at elevated temperature (420–500 °C) and pressure (31.0–51.0 MPa) in the NaCl‐H2O system to measure quartz solubility in coexisting vapor and liquid and extend the calibrated range of the Si‐Cl geothermobarometer. In the vapor, the density‐based equations for quartz solubility of Fournier (1983, http://doi.org/10.1016/0016‐7037(83)90279‐X) and Von Damm et al. (1991, http://doi.org/10.2475/ajs.291.10.977) agree well with the experimental data, while the equation of Fournier (1983) also accurately predicts SiO2(aq) concentrations in the liquid. Importantly, the equations of Fournier (1983) and Von Damm et al. (1991) were calibrated based on quartz solubility in single phase fluids (no coexisting vapor‐liquid) at higher pressure than investigated here. The new experimental data therefore extend the pressure range of the density‐equations and demonstrate that quartz solubility in either vapor or liquid can be treated independently as a function of temperature, pressure, and fluid density. The Si‐Cl geothermobarometer indicates that fluids venting from Piccard reach 540 ± 15 °C, 62.5 ± 3.0 MPa. These are the hottest and deepest conditions yet recorded by an actively venting seafloor hydrothermal fluid. Based on the calculated enthalpy differences between the subsurface fluid and that venting at the seafloor, approximately one third of the heat extracted at depth is lost during conductive cooling of the hydrothermal fluid. Incorporating the heat lost during conductive cooling into the overall budget at Piccard yields a flux of 100 ± 37 MW and an associated hydrothermal fluid flux of 1.2 ± 0.4 × 109 kg/year. The newly calibrated Si‐Cl geothermobarometer provides important constraints for accurate determination of heat and mass fluxes at axial vent sites.
Dissolved gases in perennially ice-covered lakes of the McMurdo Dry Valleys, Antarctica

Measurements of dissolved N2, O2, Ar, CO2, and CH4 were made in perennially ice-covered Lake Hoare. Results confirm previous reports that O2 concentrations in the upper water column exceed atmospheric equilibrium and that N2 and Ar are supersaturated throughout the water column. The mean supersaturation of N2 was found to be 2.0 (±0.37) and Ar was 3.8 (±1.1). The ratios of N2/Ar (20.3 ±3.8), and O2/Ar (22.5 ±4.0) at the ice-water interface are consistent with those previously measured, suggesting that bubble formation is the main process for removing gas from the lake. However, the saturations of N2 and Ar greatly exceed those previously predicted for degassing by bubble formation only at the ice-water interface. The data support the hypothesis that removal of gas by bubbles occurs in the water column to a depth of 11 m in Lake Hoare. CO2 concentration increases from near zero at the ice-water interface to 80–100 times saturation at and below the chemocline at c. 28 m. There is considerable variability in the gas concentrations throughout the water column; samples separated in depth by one metre may vary by more than 50% in gas content. It is likely that this phenomenon results from the lack of turbulent mixing in the water column. Methane (c. 2 μg 1−1) was detected below the chemocline and immediately above the sediment/water interface at a depth of 30 m. Samples from lakes Vanda, Joyce, and Miers, also show supersaturations of O2, N2, and Ar at levels similar to levels found in Lake Hoare.
Two membrane protein fractions from rat central myelin with inhibitory properties for neurite growth and fibroblast spreading

Lack of neurite growth in optic nerve explants in vitro has been suggested to be due to nonpermissive substrate properties of higher vertebrate central nervous system (CNS) white matter. We have searched for surface components in CNS white matter, which would prevent neurite growth. CNS, but not peripheral nervous system (PNS) myelin fractions from rat and chick were highly nonpermissive substrates in vitro. We have used an in vitro spreading assay with 3T3 cells to quantify substrate qualities of membrane fractions and of isolated membrane proteins reconstituted in artificial lipid vesicles. CNS myelin nonpermissiveness was abolished by treatment with proteases and was not associated with myelin lipid. Nonpermissive proteins were found to be membrane bound and yielded highly nonpermissive substrates upon reconstitution into liposomes. Size fractionation of myelin protein by SDS-PAGE revealed two highly nonpermissive minor protein fractions of Mr 35 and 250-kD. Removal of 35- and of 250-kD protein fractions yielded a CNS myelin protein fraction with permissive substrate properties. Supplementation of permissive membrane protein fractions (PNS, liver) with low amounts of 35- or of 250-kD CNS myelin protein was sufficient to generate highly nonpermissive substrates. Inhibitory 35- and 250-kD proteins were found to be enriched in CNS white matter and were found in optic nerve cell cultures which contained highly nonpermissive, differentiated oligodendrocytes. The data presented demonstrate the existence of membrane proteins with potent nonpermissive substrate properties. Distribution and properties suggest that these proteins might play a crucial inhibitory role during development and regeneration in CNS white matter.
Frequency Domain Measures of Heart Period Variability and Mortality After Myocardial Infarction

BackgroundWe studied 715 patients 2 weeks after myocardial infarction to establish the associations between six frequency domain measures of heart period variability (HPV) and mortality during 4 years of follow-up. Methods and ResultsEach measure of HPV had a significant and at least moderately strong univariate association with all-cause mortality, cardiac death, and arrhythmic death. Power in the lower-frequency bands–ultra low frequency (ULF) and very low frequency (VLF) power–had stronger associations with all three mortality end points than power in the higher-frequency bands-low frequency (LF) and high frequency (HF) power. The 24-hour total power also had a significant and strong association with all three mortality end points. VLF power was the only variable that was more strongly associated with arrhythmic death than with cardiac death or all-cause mortality. In multivariate Cox regression models using a step-up approach to evaluate the independent associations between frequency domain measures of heart period variability and death of all causes, ULF power was selected first (i.e., was the single component with the strongest association). Adding VLF or LF power to the Cox regression model significantly improved the prediction of outcome. With both ULF and VLF power in the Cox regression model, the addition of the other two components, LF and HF power, singly or together, did not significantly improve the prediction of all-cause mortality. We explored the relation between the heart period variability measures and all-cause mortality, cardiac death, and arrhythmic death before and after adjusting for five previously established postinfarction risk predictors: age, New York Heart Association functional class, rales in the coronary care unit, left ventricular ejection fraction, and ventricular arrhythmias detected in a 24-hour Holter ECG recording ConclusionsAfter adjustment for the five risk predictors, the association between mortality and total, ULF, and VLF power remained significant and strong, whereas LF and HF power were only moderately strongly associated with mortality. The tendency for VLF power to be more strongly associated with arrhythmic death than with all-cause or cardiac death was still evident after adjusting for the five covariates. Adding measures of HPV to previously known predictors of risk after myocardial infarction identifies small subgroups with a 2.5-year mortality risk of approximately 50%.
A dynamical and kinematical model of the Galactic stellar halo and possible implications for galaxy formation scenarios

We re-analyse the kinematics of the system of blue horizontal branch field (BHBF) stars in the Galactic halo (in particular the outer halo), fitting the kinematics with the model of radial and tangential velocity dispersions in the halo as a function of galactocentric distance r proposed by Sommer-Larsen, Flynn & Christensen (1994), using a much larger sample (almost 700) of BHBF stars. The basic result is that the character of the stellar halo velocity ellipsoid changes markedly from radial anisotropy at the sun to tangential anisotropy in the outer parts of the Galactic halo (r greater than approx 20 kpc). Specifically, the radial component of the stellar halo's velocity ellipsoid decreases fairly rapidly beyond the solar circle, from approx 140 +/- 10 km/s at the sun, to an asymptotic value of 89 +/- 19 km/s at large r. The rapid decrease in the radial velocity dispersion is matched by an increase in the tangential velocity dispersion, with increasing r. Our results may indicate that the Galaxy formed hierarchically (partly or fully) through merging of smaller subsystems - the 'bottom-up' galaxy formation scenario, which for quite a while has been favoured by most theorists and recently also has been given some observational credibility by HST observations of a potential group of small galaxies, at high redshift, possibly in the process of merging to a larger galaxy (Pascarelle et al 1996).
Exposure to phthalate esters.

The American Chemistry Council Phthalate Esters Panel read with great interest the paper by Blount et al. (1) regarding urinary levels of phthalate ester metabolites in a sample set of the Third National Health and Nutrition Examination Survey (NHANES III) population. We have known for some time of this research, and have provided whatever information and assistance we could to the Centers for Disease Control and Prevention (CDC). The paper presents some interesting and informative data on the likely exposure levels of phthalate esters, which are summarized below: • We believe that the data are analytically sound in that the CDC measured a physiologically relevant metabolite of the phthalate monoester as opposed to many investigators who have measured phthalate diester in biological samples (blood and tissues) as a biomonitor of exposure. Measurement of phthalate diesters in biological samples is highly subject to false positives from laboratory contamination. • The CDC data measure urinary concentrations of phthalate monoesters, not the daily intake of phthalate esters. Although these measurements establish a good basis for biomonitoring, further calculations are needed to relate them to doses (below which we do not expect to see effects) developed from animal toxicology studies, such as U.S. Environmental Protection Agency (U.S. EPA) reference doses (RfDs), in order to place them into the risk assessment paradigm. Studies being conducted by the U.K. Ministry of Agriculture, Food, and Fisheries provide a key piece of information, namely, the molar ratio of phthalate ester metabolite in the urine of human volunteers given known amounts of phthalate ester (2). With this information, the CDC data can be converted to intake levels using the equation below by substituting the creatinine-corrected concentrations of monoester and a maximum output of 20 mg creatinine/kg/day for an adult female (range of 11–20 mg creatinine/kg/day) (3).
Isolation and Characterization of Electrochemically Active Subsurface Delftia and Azonexus Species

Continental subsurface environments can present significant energetic challenges to the resident microorganisms. While these environments are geologically diverse, potentially allowing energy harvesting by microorganisms that catalyze redox reactions, many of the abundant electron donors and acceptors are insoluble and therefore not directly bioavailable. Extracellular electron transfer (EET) is a metabolic strategy that microorganisms can deploy to meet the challenges of interacting with redox-active surfaces. Though mechanistically characterized in a few metal-reducing bacteria, the role, extent, and diversity of EET in subsurface ecosystems remains unclear. Since this process can be mimicked on electrode surfaces, it opens the door to electrochemical techniques to enrich for and quantify the activities of environmental microorganisms in situ. Here, we report the electrochemical enrichment of microorganisms from a deep fractured-rock aquifer in Death Valley, California, USA. In experiments performed in mesocosms containing a synthetic medium based on aquifer chemistry, four working electrodes were poised at different redox potentials (272, 373, 472, 572 mV vs. SHE) to serve as electron acceptors, resulting in anodic currents coupled to the oxidation of acetate during enrichment. The anodes were dominated by Betaproteobacteria from the families Comamonadaceae and Rhodocyclaceae. A representative of each dominant family was subsequently isolated from electrode-associated biomass. The EET abilities of the isolated Delftia strain (designated WE1–13) and Azonexus strain (designated WE2–4) were confirmed in electrochemical reactors using working electrodes poised at 522 mV vs. SHE. The rise in anodic current upon inoculation was correlated with a modest increase in total protein content. Both genera have been previously observed in mixed communities of microbial fuel cell enrichments, but this is the first direct measurement of their electrochemical activity. While alternate metabolisms (e.g. nitrate reduction) by these organisms were previously known, our observations suggest that additional ‘hidden’ interactions with external electron acceptors are also possible. Electrochemical approaches are well positioned to dissect such extracellular interactions that may be prevalent in the subsurface.
Synaptic Metaplasticity through NMDA Receptor Lateral Diffusion

Lateral diffusion of glutamate receptors was proposed as a mechanism for regulating receptor numbers at synapses and affecting synaptic functions, especially the efficiency of synaptic transmission. However, a direct link between receptor lateral diffusion and change in synaptic function has not yet been established. In the present study, we demonstrated NMDA receptor (NMDAR) lateral diffusion in CA1 neurons in hippocampal slices by detecting considerable recovery of spontaneous or evoked EPSCs from the block of (+)-MK-801 [(+)-5-methyl-10,11-dihydro-5H-dibenzo [a,d] cyclohepten-5,10-imine maleate], an irreversible NMDAR open-channel blocker. We observed changes on both the number and the composition of synaptic NMDAR on recovery. More importantly, after the recovery, long-term potentiation (LTP)-producing protocol induced only LTD (long-term depression) instead of LTP. In contrast, a complete recovery from competitive NMDAR blocker d,l-AP-5 was observed without subsequent changes on synaptic plasticity. Our data suggest a revised model of NMDAR trafficking wherein extrasynaptic NMDARs, mostly NR1/NR2B receptors, move laterally into synaptic sites, resulting in altered rule of synaptic modification. Thus, CA1 synapses exhibit a novel form of metaplasticity in which the direction of synaptic modification can be reverted through subtype-specific lateral diffusion of NMDA receptors.
Which Patients with Giant Cell Arteritis Will Develop Cardiovascular or Cerebrovascular Disease? A Clinical Practice Research Datalink Study

Objective. To evaluate the risk of cerebrovascular disease and cardiovascular disease (CVD) in patients with giant cell arteritis (GCA), and to identify predictors. Methods. The UK Clinical Practice Research Datalink 1991–2010 was used for a parallel cohort study of 5827 patients with GCA and 37,090 age-, sex-, and location-matched controls. A multivariable competing risk model (non-cerebrovascular/CV-related death as the competing risk) determined the relative risk [subhazard ratio (SHR)] between patients with GCA compared with background controls for cerebrovascular disease, CVD, or either. Each cohort (GCA and controls) was then analyzed individually using the same multivariable model, with age and sex now present, to identify predictors of CVD or cerebrovascular disease. Results. Patients with GCA, compared with controls, had an increased risk SHR (95% CI) of cerebrovascular disease (1.45, 1.31–1.60), CVD (1.49, 1.37–1.62), or either (1.47, 1.37–1.57). In the GCA cohort, predictors of “cerebrovascular disease or CVD” included increasing age, > 80 years versus < 65 years (1.98, 1.62–2.42), male sex (1.20, 1.05–1.38), and socioeconomic status, most deprived quintile versus least deprived (1.34, 1.01–1.78). These predictors were also present within the non-GCA cohort. Conclusion. Patients with GCA are more likely to develop cerebrovascular disease or CVD than age-, sex-, and location-matched controls. In common with the non-GCA cohort, patients who are older, male, and from the most deprived compared with least deprived areas have a higher risk of cerebrovascular disease or CVD. Further work is needed to understand how this risk may be mediated by specific behavioral, social, and economic factors.
Prevalence of Hearing Loss in US Children and Adolescents: Findings From NHANES 1988-2010

Importance There have been concerns about increasing levels of hearing impairment in children and adolescents, especially in relation to noise exposure, because even mild levels of hearing loss can affect educational outcomes. Objective To further characterize changes in prevalence of hearing loss and noise exposures in the US pediatric population over time. Design, Setting, and Participants This is a retrospective analysis of demographic and audiometric data from the Third National Health and Nutrition Examination Survey (NHANES III, 1988-1994), NHANES 2005-2006, NHANES 2007-2008, and NHANES 2009-2010. The NHANES are nationally representative survey data sets collected and managed by the US National Center for Health Statistics, and this study includes a total of 7036 survey participants ages 12 to 19 years with available audiometric measurements. Exposures Hearing-related behaviors and risk factors such as history of ear infections, noise exposures, firearm use, and hearing protection use. Main Outcomes and Measures Level of hearing loss measured by pure-tone audiometry, as well as high-frequency and low-frequency hearing loss and noise-induced threshold shifts. Results Overall, data from 7036 survey participants ages 12 to 19 years with available audiometric measurements were analyzed. The prevalence of hearing loss increased from NHANES III to NHANES 2007-2008 (17.0% to 22.5% for >15 dB hearing loss; absolute difference, 5.5%; 95% CI, 6.1%-10.3%) but decreased in the NHANES 2009-2010 to 15.2% (absolute difference, 7.2%; 95% CI, 2.0%-12.4%) with no significant overall secular trend identified. There was an overall rise in exposure to loud noise or music through headphones 24 hours prior to audiometric testing from NHANES III to NHANES 2009-2010. However, noise exposure, either prolonged or recent, was not consistently associated with an increased risk of hearing loss across all surveys. The most recent survey cycle showed that nonwhite race/ethnicity and low socioeconomic status are independent risk factors for hearing loss. Conclusions and Relevance This analysis did not identify significant changes in prevalence of hearing loss in US youth ages 12 to 19 years over this time period despite increases in reported noise exposures. No consistent associations were shown between noise exposure and hearing loss, though there was an association between racial/ethnic minority status and low socioeconomic status and increased risk of hearing loss. Ongoing monitoring of hearing loss in this population is necessary to elucidate long-term trends and identify targets for intervention.