Miracle-dz/UniFAR-FTUs huggingface dataset:
Hostility and cardiovascular reactivity during marital interaction.

OBJECTIVE Prior studies demonstrate that hostile persons respond to social stressors with heightened cardiovascular responses. This study examined the effects of individual differences in hostility and two experimentally manipulated social stressors on cardiovascular reactivity during marital interaction. METHODS Sixty couples participated in a discussion task under conditions of high or low evaluative threat and while either agreeing or disagreeing with each other. Individual differences in hostility were assessed with the Buss-Perry Aggression Questionnaire. Participants' appraisal of their spouses' behavior during the interaction task was assessed with a standardized measure. Systolic and diastolic blood pressure and heart rate responses were recorded. RESULTS Among husbands, hostility was associated with greater systolic blood pressure reactivity under high, but not low, threat. Appraisals suggested that this might be due to husbands' efforts to assert dominance in the interaction. Wives' hostility scores were unrelated to cardiovascular reactivity, but wives disagreeing with hostile husbands showed greater heart rate reactivity. CONCLUSIONS Heightened cardiovascular reactivity to stressful marital interactions among hostile men provides additional evidence of the viability of this psychophysiologic mechanism as a link between hostility and health. The lack of effects among wives suggests sex differences in the social psychophysiology of hostility. Interpersonal concepts and methods are useful in the study of psychosocial risk factors and mechanisms.
Chondrogenic ATDC5 cells: An optimised model for rapid and physiological matrix mineralisation

The development of chondrogenic cell lines has led to major advances in the understanding of how chondrocyte differentiation is regulated, and has uncovered many signalling pathways and gene regulatory mechanisms required to maintain normal function. ATDC5 cells are a well established in vitro model of endochondral ossification; however, current methods are limited for mineralisation studies. In this study we demonstrate that culturing cells in the presence of ascorbic acid and 10 mM β-glycerophosphate (βGP) significantly increases the rate of extracellular matrix (ECM) synthesis and reduces the time required for mineral deposition to occur to 15 days of culture. Furthermore, the specific expression patterns of Col2a1 and Col10a1 are indicative of ATDC5 chondrogenic differentiation. Fourier transform-infrared spectroscopy analysis and transmission electron microscopy (TEM) showed that the mineral formed by ATDC5 cultures is similar to physiological hydroxyapatite. Additionally, we demonstrated that in cultures with βGP, the presence of alkaline phosphatase (ALP) is required for this mineralisation to occur, further indicating that chondrogenic differentiation is required for ECM mineralisation. Together, these results demonstrate that when cultured in the presence of ascorbic acid and 10 mM βGP, ATDC5 cells undergo chondrogenic differentiation and produce a physiological mineralised ECM from Day 15 of culture onwards. The rapid and novel method for ATDC5 culture described in this study is a major improvement compared with currently published methods and this will prove vital in the pursuit of underpinning the molecular mechanisms responsible for poor linear bone growth observed in a number of chronic diseases such as cystic fibrosis, chronic kidney disease, rheumatological conditions and inflammatory bowel disease.
Analysis of Group Randomized Trials with Multiple Binary Endpoints and Small Number of Groups

The group randomized trial (GRT) is a common study design to assess the effect of an intervention program aimed at health promotion or disease prevention. In GRTs, groups rather than individuals are randomized into intervention or control arms. Then, responses are measured on individuals within those groups. A number of analytical problems beset GRT designs. The major problem emerges from the likely positive intraclass correlation among observations of individuals within a group. This paper provides an overview of the analytical method for GRT data and applies this method to a randomized cancer prevention trial, where multiple binary primary endpoints were obtained. We develop an index of extra variability to investigate group-specific effects on response. The purpose of the index is to understand the influence of individual groups on evaluating the intervention effect, especially, when a GRT study involves a small number of groups. The multiple endpoints from the GRT design are analyzed using a generalized linear mixed model and the stepdown Bonferroni method of Holm.
I.T. changes : an exploration of the relationship between motivation, trust, and resistance to change in information technology

Change is an organizational inevitability. There are few fields that undergo change more rapidly than information technology. Keeping up with the pace of change in a field so inclined toward change may take a unique toll on workers in information technology. Yet, little has been done to investigate workers' orientations toward change in this turbulent field. Accordingly, this research explores attitudes toward change and some possible related characteristics among individuals who work in the field of information technology. The primary purpose of this study was to explore the nature of resistance to change in information technology. The secondary purpose of this study was to discover potential relationships between resistance to change and several well-known motivational variables, specifically empowerment, engagement, and workaholism. Trust was included in this model as well because it has been shown to relate to both motivation and resistance to change and because trust is generally understood to be a characteristic that eases interaction and reduces transaction costs. This study used a web-based survey to collect responses from individuals employed in two medium-sized information technology organizations. Responses were analyzed using correlational, regression, path, and factor analyses to analyze participants' responses. Results indicated that resistance to change is a factor in information technology. Also, two of three motivational characteristics were related negatively to resistance to change. Trust was related negatively to resistance to change and positively to the same two motivational characteristics, but did not mediate the relationship between these variables. These findings are discussed in terms of their relevance to the study of information technology as they suggest possible implications for organizational functioning, individual well-being, technology adoption, coping, and innovation.
Learning Large Scale Common Sense Models of Everyday Life

Recent work has shown promise in using large, publicly available, hand-contributed commonsense databases as joint models that can be used to infer human state from day-to-day sensor data. The parameters of these models are mined from the web. We show in this paper that learning these parameters using sensor data (with the mined parameters as priors) can improve performance of the models significantly. The primary challenge in learning is scale. Since the model comprises roughly 50,000 irregularly connected nodes in each time slice, it is intractable either to completely label observed data manually or to compute the expected likelihood of even a single lime slice. We show how to solve the resulting semi-supervised learning problem by combining a variety of conventional approximation techniques and a novel technique for simplifying the model called context-based pruning. We show empirically that the learned model is substantially better at interpreting sensor data and an detailed analysis of how various techniques contribute to the performance.
Specification of Optic Nerve Oligodendrocyte Precursors by Retinal Ganglion Cell Axons

Cell fate commitment in the developing CNS frequently depends on localized cell–cell interactions. In the avian visual system the optic nerve oligodendrocytes are derived from founder cells located at the floor of the third ventricle. Here we show that the induction of these founder cells is directly dependent on signaling from the retinal ganglion cell (RGC) axons. The appearance of oligodendrocyte precursor cells (OPCs) correlates with the projection of RGC axons, and early eye removal dramatically reduces the number of OPCs. In vitro signaling from retinal neurites induces OPCs in responsive tissue. Retinal axon induction of OPCs is dependent on sonic hedgehog (Shh) and neuregulin signaling, and the inhibition of either signal reduces OPC induction in vivo and in vitro. The dependence of OPCs on retinal axonal cues appears to be a common phenomenon, because ocular retardation (orJ) mice lacking optic nerve have dramatically reduced OPCs in the midline of the third ventricle.
Old and new challenges in using species diversity for assessing biodiversity

Although the maintenance of diversity of living systems is critical for ecosystem functioning, the accelerating pace of global change is threatening its preservation. Standardized methods for biodiversity assessment and monitoring are needed. Species diversity is one of the most widely adopted metrics for assessing patterns and processes of biodiversity, at both ecological and biogeographic scales. However, those perspectives differ because of the types of data that can be feasibly collected, resulting in differences in the questions that can be addressed. Despite a theoretical consensus on diversity metrics, standardized methods for its measurement are lacking, especially at the scales needed to monitor biodiversity for conservation and management purposes. We review the conceptual framework for species diversity, examine common metrics, and explore their use for biodiversity conservation and management. Key differences in diversity measures at ecological and biogeographic scales are the completeness of species lists and the ability to include information on species abundances. We analyse the major pitfalls and problems with quantitative measurement of species diversity, look at the use of weighting measures by phylogenetic distance, discuss potential solutions and propose a research agenda to solve the major existing problems.
EEG Evidence for Shunt Requirement During Carotid Endarterectomy: Optimal EEG Derivations With Respect to Frequency Bands and Anesthetic Regimen

Summary Currently there is no consensus on the derivations that should be used for EEG monitoring during carotid endarterectomy (CEA). The aim of this study was to determine which derivations distinguish the best between patients requiring a shunt and patients who do not need a shunt. Four predefined frequency bands and two regimens for general anesthesia (isoflurane versus propofol) were used. EEG data (16 channels) were obtained from 152 EEGs recorded during carotid endarterectomy. Analog EEG signals of preclamp and clamp periods of 100 seconds were digitized to compute power spectra. Changes in power during clamping were calculated for all possible derivations in four predefined frequency bands and were expressed as Z-scores. For each derivation, the area under the receiver operating characteristics curve was calculated. Derivations with the greatest area under the receiver operating characteristics curve were considered to distinguish the best between the shunt and the nonshunt groups formed in retrospect on the basis of consensus between three independent and experienced board-certified electroencephalographers. The two different anesthetic regimens resulted in different patterns of EEG changes because of clamping. The optimal derivations to differentiate between the shunt and the nonshunt groups also differed for the two anesthetic regimens, although for both conditions, anterior head regions were especially preferred. The optimal derivations are given for each anesthetic regimen.
A chart review of morbidity patterns among adult patients attending primary care setting in urban Odisha, India: An International Classification of Primary Care experience

Introduction: Disease burden estimations based on sound epidemiological research provide the foundation for designing health services. Patients visiting a primary care often present with symptoms and signs. Understanding the burden is crucial for developing countries including India. The project aimed to record the reasons for encounter (RFE) at primary care settings for estimating the burden at the health-care facility. Methodology: This cross-sectional study was undertaken at four urban health dispensaries of Bhubaneswar, Odisha, with the aim to explore the prevailing patterns of diseases among patients attending these facilities. Data collection spanned from May to October 2012. At each center, patients' information on age, sex, religion, and presenting illness was extracted from the outpatient records over these time period. Data were entered and analyzed in SPSS version 20, and the International Classification of Primary Care-2 was used for coding the illnesses. Results: In total, 2249 patient's records were extracted over 12 weeks. Out of them, 1241 (55.2%) were male with mean age of 41.8 (±15.8) years vis-à -vis 38.2 (±14.1) years for females. Around 151 (6.7%) had 2 or more symptoms or conditions. Overall, the most common categories were general and unspecified followed by digestive-related symptoms in both sexes. The most common symptoms among males were fever (11.4%), heart burn (8.1%), and vertigo or dizziness (3.6%). Similar pattern was seen among females. Respiratory (17.0%) and cardiovascular (10.2%) problems were the most common RFEs among males and females. The most common RFEs for acute care among males and females were fever, allergic rhinitis, upper respiratory tract infection, and acute bronchitis. Leading RFEs for chronic care among males were hypertension uncomplicated, heart burn, low back pain, whereas among females, hypertension and heartburn were mostly seen. Conclusion: Primary care settings are experiencing both communicable and non-communicable diseases along with injuries. Understanding the distribution of the diseases are essential to design appropriate service package at primary care.
Cardiac susceptibility artifacts arising from the heart‐lung interface

Cardiac MRI studies often show susceptibility artifacts along the inferoapical myocardial margin in both human and in vivo animal experiments at field strengths of 1.5T and greater. This study was designed to determine the cause of these artifacts in porcine myocardium at 3T. Gradient echo images were obtained under various anatomic and physiologic conditions to systematically study potential sources of local susceptibility gradients. Lung resection in the open‐chested, euthanized swine was the only intervention that eliminated the artifact. The data suggest that in the porcine model, the heart‐lung interface is the primary cause of these artifacts. Magn Reson Med 45:341–345, 2001. © 2001 Wiley‐Liss, Inc.
Detection and Discrimination of Relative Spatial Phase by V1 Neurons

Edge-like and line-like features result from spatial phase congruence, the local phase agreement between harmonic components of a spatial waveform. Psychophysical observations and models of early visual processing suggest that human visual feature detectors are specialized for edge-like and line-like phase congruence. To test whether primary visual cortex (V1) neurons account for such specificity, we made tetrode recordings in anesthetized macaque monkeys. Stimuli were drifting equal-energy compound gratings composed of four sinusoidal components. Eight congruence phases (one-dimensional features) were tested, including line-like and edge-like waveforms. Many of the 137 single V1 neurons (recorded at 45 sites) could reliably signal phase congruence by any of several response measures. Across neurons, the preferred spatial feature had only a modest bias for line-like waveforms. Information-theoretic analysis showed that congruence phase was temporally encoded in the frequency band present in the stimuli. The most sensitive neurons had feature discrimination thresholds that approached psychophysical levels, but typical neurons were substantially less sensitive. In single V1 neurons, feature discrimination exhibited various dependences on the congruence phase of the reference waveform. Simple cells were over-represented among the most sensitive neurons and on average carried twice as much feature information as complex cells. However, the distribution of the indices of optimal tuning and discrimination of relative phase was indistinguishable in simple and complex cells. Our results suggest that phase-sensitive pooling of responses is required to account for human psychophysical performance, although variation in feature selectivity among nearby neurons is considerable.
The Commit Size Distribution of Open Source Software

With the growing economic importance of open source, we need to improve our understanding of how open source software development processes work. The analysis of code contributions to open source projects is an important part of such research. In this paper we analyze the size of code contributions to more than 9,000 open source projects. We review the total distribution and distinguish three categories of code contributions using a size-based heuristic: single focused commits, aggregate team contributions, and repository refactorings. We find that both the overall distribution and the individual categories follow a power law. We also suggest that distinguishing these commit categories by size will benefit future analyses.
Academic Impact of a Public Electronic Health Database: Bibliometric Analysis of Studies Using the General Practice Research Database

Background Studies that use electronic health databases as research material are getting popular but the influence of a single electronic health database had not been well investigated yet. The United Kingdom's General Practice Research Database (GPRD) is one of the few electronic health databases publicly available to academic researchers. This study analyzed studies that used GPRD to demonstrate the scientific production and academic impact by a single public health database. Methodology and Findings A total of 749 studies published between 1995 and 2009 with ‘General Practice Research Database’ as their topics, defined as GPRD studies, were extracted from Web of Science. By the end of 2009, the GPRD had attracted 1251 authors from 22 countries and been used extensively in 749 studies published in 193 journals across 58 study fields. Each GPRD study was cited 2.7 times by successive studies. Moreover, the total number of GPRD studies increased rapidly, and it is expected to reach 1500 by 2015, twice the number accumulated till the end of 2009. Since 17 of the most prolific authors (1.4% of all authors) contributed nearly half (47.9%) of GPRD studies, success in conducting GPRD studies may accumulate. The GPRD was used mainly in, but not limited to, the three study fields of “Pharmacology and Pharmacy”, “General and Internal Medicine”, and “Public, Environmental and Occupational Health”. The UK and United States were the two most active regions of GPRD studies. One-third of GRPD studies were internationally co-authored. Conclusions A public electronic health database such as the GPRD will promote scientific production in many ways. Data owners of electronic health databases at a national level should consider how to reduce access barriers and to make data more available for research.
The response of meat ducks from 15 to 35 d of age to gossypol from cottonseed meal

The objective of this study was to investigate the responses of meat ducks of 15 to 35 d of age to free gossypol (FG) from cottonseed meal (CSM) and to establish the maximum limits of dietary FG concentration based on growth performance, blood parameters, and tissue residues of gossypol. Nine hundred 15-d-old ducks were randomly allocated to 5 treatments with 10 cages/treatment and 18 ducks/cage on the basis of BW. Five isonitrogenous and isocaloric experimental diets were formulated on a digestible amino acid basis to produce diets in which 0% (without FG), 25% (36 mg FG/kg), 50% (75 mg FG/kg), 75% (111 mg FG/kg), and 100% (153 mg FG/kg) of protein from soybean meal were replaced by that from CSM. Increasing dietary FG content, BW, and ADG decreased (linearly, P < 0.05, except for ADG of days 29 to 35), and F/G linearly increased (P < 0.05). At 35 d, blood hemoglobin, mean corpuscular hemoglobin, and mean corpuscular hemoglobin concentration linearly decreased (P < 0.05), while serum total protein, albumin, and globulin content linearly decreased (P < 0.05), and the residue of gossypol in liver, kidney, heart, breast, and leg muscle linearly increased (P < 0.001) with increases in dietary FG concentration. Ducks fed 36 mg FG/kg (5.83% CSM of diet) diet had a normal histological structure of liver, and muscle (breast and leg) had no residue of gossypol. The maximum limit of dietary FG concentration was estimated to range from a low of 36 mg/kg to maximize serum globulin concentration to a high of 124 mg/kg to minimize feed intake for 22 to 28d on the basis of a quadratic broken-line model.
Integrated AI in Space: The Autonomous Sciencecraft on Earth Observing One

The Earth Observing One spacecraft has been under the control of AI software for several years - experimentally since 2003 and since November 2004 as the primary operations system. This software includes: model-based planning and scheduling, procedural execution, and event detection software learned by support vector machine (SVM) techniques. This software has enabled a 100x increase in the mission science return per data downlinked and a >$1M/year reduction in operations costs. In this paper we discuss the AI software used, the impact of the software, and lessons learned with implications for future AI research.
Nitrous oxide fluxes from tropical peat with different disturbance history and management

Abstract. Tropical peatlands are one of the most important terrestrial ecosystems in terms of impact on the atmospheric greenhouse gas composition. Currently, greenhouse gas emissions from tropical peatlands following disturbances due to deforestation, drainage or wildfire are substantial. We quantified in situ nitrous oxide (N2O) fluxes during both dry and wet seasons using a closed chamber method at sites that represented differing land uses and land use change intensities in Central Kalimantan, Indonesia. Cumulative N2O fluxes were compared with carbon dioxide (CO2) and methane (CH4) fluxes. The mean N2O flux rates (N2O-N &plusmn: SD, mg m−2 h−1) varied as follows: drained forest (0.112 ± 0.293) > agricultural peat at the Kalampangan site (0.012 ± 0.026) > drained burned peat (0.011 ± 0.018) > agricultural peat at the Marang site (0.0072 ± 0.028) > undrained forest (0.0025 ± 0.053) > clear-felled, drained, recovering forest (0.0022 ± 0.021). The widest N2O flux range was detected in the drained forest (max. 2.312 and min. −0.043 mg N2O-N m−2 h−1). At the other flux monitoring sites the flux ranges remained at about one tenth that of the drained forest site. The highest N2O emission rates were observed at water tables close to the peat surface where also the flux range was widest. Annual cumulative peat surface N2O emissions (expressed in CO2 equivalents as a percentage of the total greenhouse gas (N2O, CO2 and CH4) emissions) were 9.2 % at highest, but typically ~1 %. Average N2O fluxes and also the total of monitored GHG emissions were highest in drainage-affected forest which is characterized by continuous labile nitrogen availability from vegetation, and water tables typically below the surface.