Miracle-dz/UniFAR-FTUs huggingface dataset:
Bioassay and Scanning Electron Microscopic Observations Reveal High Virulence of Entomopathogenic Fungus, Beauveria bassiana, on the Onion Maggot (Diptera: Anthomyiidae) Adults

Abstract When flies were dipped in 1 × 108 conidia/ml conidia suspensions and then kept in the incubator (22 ± 1 °C, 70 ± 5% RH), scanning electron microscope observations revealed that, at 2 h, the majority of adhering Beauveria bassiana conidia were attached to either the wing surface or the interstitial area between the macrochaetae on the thorax and abdomen of the onion maggot adults. Germ tubes were being produced and had oriented toward the cuticle by 18 h. Penetration of the insect cuticle had occurred by 36 h, and by 48 h, germ tubes had completely penetrated the cuticle. Fungal mycelia had emerged from the insect body and were proliferating after 72 h. The superficial area and structure of the wings and macrochaetae may facilitate the attachment of conidia and enable effective penetration. The susceptibility of adults to 12 isolates, at a concentration of 1 × 107 conidia/ml, was tested in laboratory experiments. Eight of the more potent strains caused in excess of 85% adult mortality 8 d post inoculation, while the median lethal time (LT50) of these strains was <6 d. The virulence of the more effective strains was further tested, and the median lethal concentrations (LC50) were calculated by exposing adults to doses ranging from 103–107 conidia/ml. The lowest LC50 value, found in the isolate XJWLMQ-32, for the adults was 3.87 × 103 conidia/ml. These results demonstrate that some B. bassiana strains are highly virulent to onion maggot adults and should be considered as potential biocontrol agents against the adult flies.
Multi-resolution analysis using integrated microscopic configuration with local patterns for benign-malignant mass classification

In this paper, Curvelet based local attributes, Curvelet-Local configuration pattern (C-LCP), is introduced for the characterization of mammographic masses as benign or malignant. Amid different anomalies such as micro- calcification, bilateral asymmetry, architectural distortion, and masses, the reason for targeting the mass lesions is due to their variation in shape, size, and margin which makes the diagnosis a challenging task. Being efficient in classification, multi-resolution property of the Curvelet transform is exploited and local information is extracted from the coefficients of each subband using Local configuration pattern (LCP). The microscopic measures in concatenation with the local textural information provide more discriminating capability than individual. The measures embody the magnitude information along with the pixel-wise relationships among the neighboring pixels. The performance analysis is conducted with 200 mammograms of the DDSM database containing 100 mass cases of each benign and malignant. The optimal set of features is acquired via stepwise logistic regression method and the classification is carried out with Fisher linear discriminant analysis. The best area under the receiver operating characteristic curve and accuracy of 0.95 and 87.55% are achieved with the proposed method, which is further compared with some of the state-of-the-art competing methods.
Effects of cold stress on immune responses and body weight of chicken lines divergently selected for antibody responses to sheep red blood cells.

Effects of cold stress (CS) on the immune system of chicken lines divergently selected for high (H line) and low (L line) antibody responses to SRBC next to a randombred control (C) line were studied. Three- to four-week-old growing chicks of the three lines were feed-restricted at 80% ad libitum and subjected to CS at 10 degrees C continuously for 7, 5, 3, 1, or 0 d prior to immunization with keyhole limpet hemocyanin (KLH). Specific and natural antibodies were measured in the three chicken lines subjected to or not subjected to various durations of CS prior to immunization. In addition to antibodies we also measured in vitro lymphocyte proliferation as a measure of cell-mediated immunity (CMI), zymosan-induced reactive oxygen intermediates (ROI) production as a measure of phagocytosis, and BW gain as a measure of production trait. In general, significantly higher antibody responses to KLH and natural antigens were found in the H line as compared to the other two lines. Specific antibody responses to KLH were not significantly affected by CS, but an acute transient increase in natural antibody titers to ovalbumin was found in H line birds subjected to 1 d of CS, which was not found in C or L line birds. On the other hand, an acute significant increase in natural antibody titers to lipopolysaccharide (LPS) was found in C and L line birds subjected to 1 d CS but not in H line birds. Cold stress enhanced the ROI production. In addition, 7 d of CS significantly enhanced cellular immunity in vitro, but no significant line effects with respect to cellular immunity were found. BW gain was negatively affected by CS, especially when CS was applied for longer periods. We concluded that birds responded immediately to CS with enhanced innate (phagocyte and natural antibody) immunity, irrespective of genetic background. When CS is prolonged, the cellular adaptive immune response is affected also. Although reallocation of energy was not measured, our data suggested that under limited conditions (e.g., restricted feeding) with simultaneous stress (e.g., CS), growth and cellular immunity were more sensitive than thermoregulation and humoral immunity. With respect to vital life traits, thermoregulation may have first priority followed by adaptive cellular immunity, humoral immunity, and BW gain. The relationships between immune responses and adaptation to stress are discussed.
The effect of dietary phytase on growth performance and phosphorus utilization of broiler chicks.

Two experiments were conducted to evaluate the effect of dietary phytase and increasing levels of available phosphorus (P(av)) on the growth performance and phosphorus metabolism of broiler chicks. In both experiments, graded levels of P provided by dicalcium phosphate and of phytase were added to a low-P corn-soybean meal basal diet. In Experiment 1, diets providing . 21, . 29, . 37, and . 44% P(av) without phytase; . 21% P(av) plus . 05, . 10, or . 30% phytase; and . 29% P(av) plus . 10% phytase were each fed to four groups of seven chicks, 3 days of age. In Experiment 2, diets providing P(av) levels of . 32, . 38, and . 44% and phytase levels of . 5, 1.0, and 1.5% (250, 500, and 750 units/kg) in a factorial arrangement were each fed to four groups of eight chicks, 5 days of age. In Experiment 1, increasing dietary P(av), but not phytase, increased feed intake, weight gain, feed conversion, plasma inorganic P, tibia and toe ash, and tibia breaking strength (P < or = .05). Plasma inorganic P responded quadratically to increasing dietary phytase. In Experiment 2, feed intake and weight gain were increased by elevating the level of P(av), but not by phytase. Toe and tibia ash and plasma inorganic P were increased by dietary phytase and increasing levels of P(av) (P < or = .01). Tibia breaking strength was improved (P < or = .05) by dietary phytase but not by increasing levels of P(av). The P excretion was elevated (P < or = .01) by increasing levels of P(av) and was decreased by supplemental phytase (P < or = .05). (ABSTRACT TRUNCATED AT 250 WORDS)
Formulation and characterization of Methotrexate loaded sodium alginate chitosan Nanoparticles

The aim of the present work was to formulate nanoparticles for Methotrexate drug. Methotrexate is an anticancer, disease modifying anti rheumatic drug, and BCS Class – III drug having high solubility and low permeability. Nanoparticles were prepared by ionotropic pregelation method using Box Behnen Formula. The concentration of chitosan (X1),concentration of sodium alginate (X2) and concentration of Methotrexate (X3) were chosen as independent variables while particle size, drug entrapment efficiency and percentage drug release at 36 th hour, was taken as dependent variables. The dissolution profile of selected formulations was fitted to zero order, first order, Higuchi and Korsemayer Peppas models to ascertain the kinetic modeling of drug release. The prepared formulations were further evaluated for characterization like surface morphology, particle size distribution, zetapotential and drug excipient interaction study by Fourier Transformer Infra Red Spectroscopy, Differential Scanning Calorimetry and X-ray Diffraction. All independent variables were found to significantly influence the particle size, entrapment efficiency and percentage of drug release. The in- vitro drug release profile showed that the suitability of sodium alginate-chitosan loaded nanoparticles in controlled release of methotrexate for prolonged time.
Encapsulation of Red Cabbage (Brassica oleracea L. var.capitata L. f. rubra) Anthocyanins by Spray Drying using Different Encapsulating Agents

This study aimed to evaluate the influence of the drying air temperature (140 and 160°C) and the concentration of encapsulating agents gum Arabic and polydextrose (10 and 15%) on the physicochemical characteristics of the red cabbage extract obtained through extraction in acidulated water and drying using a spray dryer. The anthocyanin retention, antioxidant activity, water activity, solubility, color and microstructure of the final product were analyzed. Results showed that increase in the temperature did not cause significant changes in the anthocyanin quantity and antioxidant activity. The microscopic analysis revealed that for both the encapsulating agents, the absence of fissures and porosity in the particle surfaces produced powder with high solubility in water. The principal component analyses showed a strong correlation between the anthocyanin content and the antioxidant activity (r = 0.82) and luminosity (r = 0.81).
Reference values of hand-grip dynamometry and the relationship between low strength and mortality in older Chileans

Aim This study was aimed to set reference values of hand-grip strength by age and sex and validate cut points for risk of functional limitation and mortality in older Chileans. Methods This was a pooled analysis of four studies including 6,426 people ≥60 years of nondependent community-dwelling Chileans. After exclusion criteria, the final sample included 5,250 subjects, from whom 2,193 were followed to study all-cause mortality associated with low hand-grip strength. Face-to-face interviews registering sociodemographic characteristics, self-reported chronic diseases, and functional limitations were conducted. Anthropometric measurements and observed mobility were performed by trained professionals. Hand-grip strength was measured with a hand dynamometer T-18 (Country Technology, Inc.) before 2008 or with JAMAR brand from 2008 onwards. Percentiles were calculated through descriptive analysis and quantile regression models for specific groups of age and sex. Adjusted Cox regression hazard models for mortality risk according to low dynamometry condition and covariates were developed. Results We deliver reference values of hand-grip strength for older Chileans proposing the 25th percentile as the cut-off point for low dynamometry risk: men ≤27 kg, women ≤15 kg. Low hand-grip strength was associated with Instrumental Activities of Daily Living limitations (p=0.001), and altered physical performance evaluated through the Timed Up and Go test (p=0.0001), grasping (p=0.001), bending (p<0.0001), and lifting (p<0.0001). After Cox proportional hazard regression models were assessed with a median follow-up of 9.2 years, the adjusted risk of all-cause mortality associated with a hand-grip strength lower than the 25th percentile in older Chileans showed a hazard ratio of 1.39 (95% confidence interval: 1.13–1.71). Conclusion The cut-off points of dynamometry validated for the older Chileans allow the incorporation in the geriatric evaluation in primary health care of an easy-to-use, inexpensive indicator to identify older adults at risk of sarcopenia, frailty, and dismobility. In addition this also helps to optimize the evaluation of intervention strategies focused on the maintenance of functionality.
Microstructure and Mechanical Properties of High Manganese Steel Processed by Cold Working and Aging at 4.2 K

High manganese steel is a promising choice as a jacket material for Nb3Sn superconducting magnet due to the low thermal expansion, high strength combined with good ductility. One kind of high manganese steel with the Mn content of about 21% was developed for reviewing the mechanical properties at 4.2 K. In this paper, the mechanical performances of the developed high Mn steel in solution annealed as well as in cold worked and aged condition were tested. Influences from cold working and aging processes on microstructure and mechanical properties were analyzed.
Cognitive outcomes of pediatric stroke

ABSTRACT A limited number of longitudinal studies have investigated long-term neuropsychological development in the pediatric stroke population. This study retrospectively examines cognitive outcomes in 41 children with a history of stroke, with reference to age at stroke, laterality, region and mechanism of stroke. In the course of recovery, neuropsychological measures of intellectual functioning and memory were administered at two time points, whilst executive functioning, attention and academic skills were administered at one time point. As predicted, children with stroke performed significantly worse compared to normative expectations on all neuropsychological measures. Up to two thirds of children scored in the borderline impaired and impaired ranges on at least one domain of cognition. Performance on intellectual and memory assessment remained relatively stable over time. Younger age at stroke was found to be associated with poorer intellectual functioning. No effects of laterality of stroke on neuropsychological performance over time were found. Children with subcortical stroke demonstrated a greater improvement in immediate memory over time than children with cortical stroke. These findings reveal that children with stroke display long-term cognitive difficulties that typically remain stable over time. Attention and academic skills are particularly vulnerable to impairment. Further evidence that age at stroke is a significant factor in terms of cognitive outcome is provided, in support of the “early vulnerability” position.
Bordetella holmesii: Lipid A Structures and Corresponding Genomic Sequences Comparison in Three Clinical Isolates and the Reference Strain ATCC 51541

Bordetella holmesii can cause invasive infections but can also be isolated from the respiratory tract of patients with whooping-cough like symptoms. For the first time, we describe the lipid A structure of B. holmesii reference strain ATCC 51541 (alias NCTC12912 or CIP104394) and those of three French B. holmesii clinical isolates originating from blood (Bho1) or from respiratory samples (FR4020 and FR4101). They were investigated using chemical analyses, gas chromatography–mass spectrometry (GC–MS), and matrix-assisted laser desorption ionization–mass spectrometry (MALDI–MS). The analyses revealed a common bisphosphorylated β-(1→6)-linked d-glucosamine disaccharide with hydroxytetradecanoic acid in amide linkages. Similar to B. avium, B. hinzii and B. trematum lipids A, the hydroxytetradecanoic acid at the C-2′ position are carrying in secondary linkage a 2-hydroxytetradecanoic acid residue resulting of post-traductional biosynthesis modifications. The three clinical isolates displayed characteristic structural traits compared to the ATCC 51541 reference strain: the lipid A phosphate groups are more or less modified with glucosamine in the isolates and reference strain, but the presence of 10:0(3-OH) is only observed in the isolates. This trait was only described in B. pertussis and B. parapertussis strains, as well as in B. petrii isolates by the past. The genetic bases for most of the key structural elements of lipid A were analyzed and supported the structural data.
Major satellite repeat RNA stabilize heterochromatin retention of Suv39h enzymes by RNA-nucleosome association and RNA:DNA hybrid formation

The Suv39h1 and Suv39h2 histone lysine methyltransferases are hallmark enzymes at mammalian heterochromatin. We show here that the mouse Suv39h2 enzyme differs from Suv39h1 by containing an N-terminal basic domain that facilitates retention at mitotic chromatin and provides an additional affinity for major satellite repeat RNA. To analyze an RNA-dependent interaction with chromatin, we purified native nucleosomes from mouse ES cells and detect that Suv39h1 and Suv39h2 exclusively associate with poly-nucleosomes. This association was attenuated upon RNaseH incubation and entirely lost upon RNaseA digestion of native chromatin. Major satellite repeat transcripts remain chromatin-associated and have a secondary structure that favors RNA:DNA hybrid formation. Together, these data reveal an RNA-mediated mechanism for the stable chromatin interaction of the Suv39h KMT and suggest a function for major satellite non-coding RNA in the organization of an RNA-nucleosome scaffold as the underlying structure of mouse heterochromatin. DOI: http://dx.doi. org/10.7554/eLife.25293. 001
Fine mapping and single nucleotide polymorphism effects estimation on pig chromosomes 1, 4, 7, 8, 17 and X

Fine mapping of quantitative trait loci (QTL) from previous linkage studies was performed on pig chromosomes 1, 4, 7, 8, 17, and X which were known to harbor QTL. Traits were divided into: growth performance, carcass, internal organs, cut yields, and meat quality. Fifty families were used of a F2 population produced by crossing local Brazilian Piau boars with commercial sows. The linkage map consisted of 237 SNP and 37 microsatellite markers covering 866 centimorgans. QTL were identified by regression interval mapping using GridQTL. Individual marker effects were estimated by Bayesian LASSO regression using R. In total, 32 QTL affecting the evaluated traits were detected along the chromosomes studied. Seven of the QTL were known from previous studies using our F2 population, and 25 novel QTL resulted from the increased marker coverage. Six of the seven QTL that were significant at the 5% genome-wide level had SNPs within their confidence interval whose effects were among the 5% largest effects. The combined use of microsatellites along with SNP markers increased the saturation of the genome map and led to smaller confidence intervals of the QTL. The results showed that the tested models yield similar improvements in QTL mapping accuracy.
Effect of Activating Agent on the Preparation of Bamboo-Based High Surface Area Activated Carbon by Microwave Heating

Abstract The present work attempts to convert bamboo into a high surface area activated carbon via microwave heating. Different chemical activating agents such as KOH, NaOH, K2CO3 and Na2CO3 were utilized to identify a most suitable activating agent. Among the activating agents tested KOH was found to generate carbon with the highest porosity and surface area. The effect of KOH/C ratio on the porous nature of the activated carbon has been assessed. An optimal KOH/C ratio of 4 was identified, beyond which the surface area as well as the pore volume were found to decrease. At the optimized KOH/C ratio the surface area and the pore volume were estimated to be 3,441 m2/g and 2.093 ml/g, respectively, with the significant proportion of which being microporous (62.3%). Activated carbon prepared under the optimum conditions was further characterized using Fourier transform infrared spectroscopy (FTIR) and scanning electron microscope (SEM). Activated carbons with so high surface area and pore volume are very rarely reported, which could be owed to the nature of the precursor and the optimal conditions of mixture ratio adopted in the present work.
Whole-blood incubation with the Neisseria meningitidis lpxL1 mutant induces less pro-inflammatory cytokines than the wild type, and IL-10 reduces the MyD88-dependent cytokines

Levels of bacterial LPS, pro-inflammatory cytokines and IL-10 are related to the severity of meningococcal septicaemia. Patients infected with a Neisseria meninigitidis lpxL1 mutant (Nm-mutant) with penta-acylated lipid A present with a milder meningococcal disease than those infected with hexa-acylated Nm wild type (Nm-wt). The aim was to compare the pro-inflammatory responses after ex vivo incubation with the heat-inactivated Nm-wt or the Nm-mutant in citrated whole blood, and the modulating effects of IL-10. Concomitantly, we measured intracellular IL-6, IL-8 and TNF-α to elucidate which cell types were responsible for the pro-inflammatory responses. Incubation with Nm-wt (106/ml;107/ml;108/ml) resulted in a dose-dependent increase of the MyD88-dependent pro-inflammatory cytokines (IL-1β, IL-6, IL-8, TNF-α), which were mainly derived from monocytes. In comparison, only 108/ml of the Nm-mutant significantly increased the concentration of these cytokines. The MyD88-independent cytokines (IP-10, RANTES) were evidently increased after incubation with the Nm-wt but were unaffected by the Nm-mutant. Co-incubation with IL-10 significantly reduced the concentrations of the MyD88-dependent cytokines induced by both the Nm-wt and the Nm-mutant, whereas the MyD88-independent cytokines were almost unaffected. In summary, the Nm-mutant is a weaker inducer of the MyD88-dependent/independent cytokines than the Nm-wt in whole blood, and IL-10 attenuates the Nm-stimulated increase in MyD88-dependent pro-inflammatory cytokines.
The experience of anesthesia during kidney transplantation with robot assisted laparoscopic surgery

Objective: Renal transplantation is the most commonly used method to improve the quality of life of patients with end-stage renal failure. Kidney transplantation began in our hospital in 2016 with robot-assisted laparoscopic surgery (RALS). Here, we retrospectively compared the RALS technique and open surgery with respect to anesthesia management during kidney transplant operations done in our clinic. Methods: Anesthesia management, the duration of the operation and of vascular anastomosis, the amount of fluid delivered perioperatively, amount of urine, and diuretic requirements were investigated retrospectively in cases of renal transplantation (Group O, open surgical technique, n = 22; Group R, RALS technique, n = 14). Blood gas values, and lactate, bicarbonate, glucose, and electrolyte levels, were examined preoperatively after extubation. Results: The durations of surgery and vascular anastomosis were significantly longer in Group R than in Group O ( p 0.05). Conclusions: The surgical superiority of RALS technique is known. However, anesthesia management in this patient group is difficult due to the risk of the Trendelenburg position and pneumoperitoneum.
On the Strategy and Behavior of Bitcoin Mining with N-attackers

Selfish mining is a well-known mining attack strategy discovered by Eyal and Sirer in 2014. After that, the attackers' strategy has been further discussed by many other works, which analyze the strategy and behavior of a single attacker. The extension of the strategy research is greatly restricted by the assumption that there is only one attacker in the blockchain network, since, in many cases, a proof of work blockchain has multiple attackers. The attackers can be independent of others instead of sharing information and attacking the blockchain as a whole. In this paper, we will establish a new model to analyze the miners' behavior in a proof of work blockchain with multiple attackers. Based on our model, we extend the attackers' strategy by proposing a new strategy set publish-n. Meanwhile, we will also review other attacking strategies such as selfish mining and stubborn mining in our model to explore whether these strategies work or not when there are multiple attackers. The performances of different strategies are compared using relative stale block rate of the attackers. In a proof of work blockchain model with two attackers, strategy publish-n can beat selfish mining by up to 26.3%.