Miracle-dz/UniFAR-FTUs huggingface dataset:
Tumor-Associated Glycans and Their Role in Gynecological Cancers: Accelerating Translational Research by Novel High-Throughput Approaches

Glycans are important partners in many biological processes, including carcinogenesis. The rapidly developing field of functional glycomics becomes one of the frontiers of biology and biomedicine. Aberrant glycosylation of proteins and lipids occurs commonly during malignant transformation and leads to the expression of specific tumor-associated glycans. The appearance of aberrant glycans on carcinoma cells is typically associated with grade, invasion, metastasis and overall poor prognosis. Cancer-associated carbohydrates are mostly located on the surface of cancer cells and are therefore potential diagnostic biomarkers. Currently, there is increasing interest in cancer-associated aberrant glycosylation, with growing numbers of characteristic cancer targets being detected every day. Breast and ovarian cancer are the most common and lethal malignancies in women, respectively, and potential glycan biomarkers hold promise for early detection and targeted therapies. However, the acceleration of research and comprehensive multi-target investigation of cancer-specific glycans could only be successfully achieved with the help of a combination of novel high-throughput glycomic approaches.
Contrast enhanced ultrasonography (CEUS) in the characterization of tumor microcirculation. Validation of the procedure in the animal experimental model.

AIM The aims of this study are the development of a contrast enhanced ultrasonography (CEUS) protocol for rats' evaluation and the assessment of the potential benefits of CEUS in Walker 256 tumor rats. MATERIAL AND METHOD In the study were used 36 albino Wistar rats grafted subcutaneously with Walker 256 tumor. The implementation of the ultrasound (US) guided injection technique (30 subjects - group A) was performed between 4 to 8 weeks after implantation. The contrast agent (CA) - Sono Vue (Bracco) - was administered either into the lateral vein of the tail or directly into the heart under US guidance. The US validation, focusing on CEUS (6 subjects - group B) was realized at 4 to 6 weeks after implantation. The US procedures aimed to obtain morphological (2D), vascular (color Doppler and pulsed Doppler) and angiospecific functional data (CEUS). The Vevo 2100 equipment was used for US and Time Intensity Curves (TIC) were analyzed with Sonoliver (TomTec). The tumor specimens which were resected after the last study underwent a pathology exam. RESULTS A number of 23 successfully CEUS explorations were performed in 17 subjects (11 in group A and 6 in group B). Nineteen rats could not be evaluated (in 8 cases the tumor was not viable; 4 subjects died during CA administration; in 4 cases the administration line could not be obtained). In group B, CEUS was performed in 6 subjects at 4 weeks after implantation and in 5 subjects at 6 weeks. The statistical analysis of the TIC parameters identified significant differences between the Time to Peak, mean Transit Time and Rise Time parameters of the muscles and those of the tumor. CONCLUSIONS CEUS was easily implemented on the studied tumor model and is adequate for the evaluation of tumor vascularity. US guided intracardiac administration of the CA is an easy and reproducible procedure. If the examination is performed at defined time intervals it detects the alterations within the tumor circulatory bed.
Impact of Plasma Oxidized Low-Density Lipoprotein Removal on Atherosclerosis

Background— Several clinical studies of statin therapy have demonstrated that lowering low-density lipoprotein (LDL) cholesterol prevents atherosclerotic progression and decreases cardiovascular mortality. In addition, oxidized LDL (oxLDL) is suggested to play roles in the formation and progression of atherosclerosis. However, whether lowering oxLDL alone, rather than total LDL, affects atherogenesis remains unclear. Methods and Results— To clarify the atherogenic impact of oxLDL, lectin-like oxLDL receptor 1 (LOX-1), an oxLDL receptor, was expressed ectopically in the liver with adenovirus administration in apolipoprotein E–deficient mice at 46 weeks of age. Hepatic LOX-1 expression enhanced hepatic oxLDL uptake, indicating functional expression of LOX-1 in the liver. Although plasma total cholesterol, triglyceride, and LDL cholesterol levels were unaffected, plasma oxLDL was markedly and transiently decreased in LOX-1 mice. In controls, atherosclerotic lesions, detected by Oil Red O staining, were markedly increased (by 38%) during the 4-week period after adenoviral administration. In contrast, atherosclerotic progression was almost completely inhibited by hepatic LOX-1 expression. In addition, plasma monocyte chemotactic protein-1 and lipid peroxide levels were decreased, whereas adiponectin was increased, suggesting decreased systemic oxidative stress. Thus, LOX1 expressed in the livers of apolipoprotein E–deficient mice transiently removes oxLDL from circulating blood and possibly decreases systemic oxidative stress, resulting in complete prevention of atherosclerotic progression despite the persistence of severe LDL hypercholesterolemia and hypertriglyceridemia. Conclusions— OxLDL has a major atherogenic impact, and oxLDL removal is a promising therapeutic strategy against atherosclerosis.
Nondrug-related aspect of treating Ekbom disease, formerly known as restless legs syndrome

Ekbom disease (EKD), formerly known as restless legs syndrome (RLS) has affected and bothered many people over the centuries. It is one of the most prevalent neurological disorders in Europe and North-America, affecting about 10% of the population. The main characteristics are the strong urge to move, accompanied or caused by uncomfortable, sometimes even distressing, paresthesia of the legs, described as a “creeping, tugging, pulling” feeling. The symptoms often become worse as the day progresses, leading to sleep disturbances or sleep deprivation, which leads to decreased alertness and daytime functions. Numerous studies have been conducted assessing the efficacy of dopaminergic drugs, opioids, and other pharmacologic agents in alleviating EKD symptoms. However, there is also a growing body of evidence demonstrating the effectiveness of nonpharmacologic treatments including life style changes, physical activity programs, pneumatic compression, massage, near-infrared light therapy, and complementary therapies. The working mechanisms behind these alternatives are diverse. Some increase blood flow to the legs, therefore reducing tissue hypoxia; some introduce an afferent counter stimulus to the cortex and with that “close the gate” for aberrant nerve stimulations; some increase dopamine and nitric oxide and therefore augment bio-available neurotransmitters; and some generate endorphins producing an analgesic effect. The advantages of these treatments compared with pharmacologic agents include less or no side effects, no danger of augmentation, and less cost.
Quantitation of erbB2 positivity for evaluation of high-risk patients

BACKGROUND. Because trastuzumab therapy is expected to be effective in a large fraction of erbB2 (HER-2/neu) overexpressing breast cancers, it is important to find the optimal method for evaluation of erbB2 positivity, and the patient group at greatest risk of dying without this therapy. AIM. We evaluated erbB2 immunopositivity in breast cancer with the aim of finding a high-risk group for primary trastuzumab therapy. METHODS. Three hundred and seventeen samples were evaluated with an immunostaining index. Optimal cut point was systematically tested, and the effect of bcl-2 status on survival in the high-risk group was studied. RESULTS. Among N+ patients the index value 1.5 reflected the biggest difference in survival. There was a significant correlation between erbB2 positivity and bcl-2 negativity. ErbB2 was a prognosticator among postmenopausal, N+, and postmenopausal N+ patients. In multivariate analysis, erbB2 was the best prognosticator among postmenopausal N+ patients. Six out of seven N+ patients with erbB2 index 1.5 or above died including all postmenopausal patients. Bcl-2 positivity was associated with longer survival in the erbB2 positive patient group. CONCLUSIONS. The most obvious patients for primary trastuzumab therapy in breast cancer are N+ patients with high erbB2 immunostaining index (> 1.5) and bcl-2 negative immunostaining. In our material 2% of all breast cancer patients fell in this category. This patient group should be selected for testing trastuzumab in the primary treatment.
Functional role of laminin α1 chain during cerebellum development

We had developed a conditional Laminin α 1 knockout-mouse model (Lama1cko) bypassing embryonic lethality of Lama1 deficient mice to study the role of this crucial laminin chain during late developmental phases and organogenesis. Here, we report a strong defect in the organization of the adult cerebellum of Lama1cko mice. Our study of the postnatal cerebellum of Lama1cko animals revealed a disrupted basement membrane correlated to an unexpected excessive proliferation of granule cell precursors in the external granular layer (EGL). This was counteracted by a massive cell death occurring between the postnatal day 7 (P7) and day 20 (P20) resulting in a net balance of less cells and a smaller cerebellum. Our data show that the absence of Lama1 has an impact on the Bergmann glia scaffold that aberrantly develops. This phenotype is presumably responsible for the observed misplacing of granule cells that may explain the overall perturbation of the layering of the cerebellum and an aberrant folia formation.
C-Reactive Protein in Peripheral Blood of Patients with Chronic and Aggressive Periodontitis, Gingivitis, and Gingival Recessions

CRP is a plasma protein that reflects a measure of the acute phase response to inflammation and is one of the markers of choice in monitoring this response. CRP can be used for the prediction and early detection of periodontal disease. The aim of this study was to compare and evaluate the systemic levels of CRP in the peripheral blood samples of patients with chronic and aggressive periodontitis, gingivitis, and gingival recessions and compare them with periodontal clinical parameters. All patients (N = 158) were examined prior to the initiation of periodontal treatment. Patients were divided into four groups. Group A consisted of 26 patients with aggressive periodontitis, Group B consisted of 111 patients with chronic periodontitis, Group C consisted of 13 patients with gingivitis, and Group D consisted of 8 patients with gingival recessions. Our study results indicate that CRP levels increase subsequently with the severity of the periodontal disease and that the bleeding on probing index showed much better positive correlation with the CRP levels compared to the pocket depth index in both periodontitis patients groups, especially in aggressive periodontitis patients.
Rotation and Radial Motion Thresholds Support a Two-Stage Model of Differential-Motion Analysis

Lower motion thresholds for rotational and radial flow have been measured for stimuli consisting of four closely packed circular apertures, each containing patches of drifting grating or plaid. Detection and direction thresholds were measured for gratings and plaids as a function of the relative orientation of the pattern components. There was a similarity between both types of threshold, supporting the existence of specialised rotation and radial-flow detectors. Further, thresholds increased with the relative component orientation for both gratings and plaids. This suggests that component information from a first stage, tuned spatiotemporally and to orientation, is being used directly to compute the optic flow in a two-stage process. A model based on this architecture is described by means of simple template receptive-field arrays with separable temporal and spatial tuning at the first stage.
In ovo evaluation of FloraMax®‐B11 on Marek's disease HVT vaccine protective efficacy, hatchability, microbiota composition, morphometric analysis, and Salmonella enteritidis infection in broiler chickens

&NA; Three experiments were conducted to evaluate the effect of in ovo administration of FloraMax®‐B11 (FM) on Marek's disease (MD) herpesvirus of turkeys (HVT) vaccine protective efficacy, hatchability, microbiota composition, morphometric analysis, and Salmonella enteritidis (SE) infection in chickens. Experiment 1 consisted of 3 trials. In trials 1 and 2, d 18 White Leghorn 15I5x71 embryos were randomly distributed in 4 groups: 1) HVT vaccinated in ovo and no Marek's disease virus (MDV) challenge; 2), HVT + FM vaccinated in ovo and no MDV challenge; 3) HVT vaccinated in ovo and challenge with virulent MDV (vMDV; strain 583A); and 4), HVT + FM vaccinated in ovo and challenge with vMDV. Trial 3 was designed exactly the same as Experiment 1 but chicks were challenged with very virulent MDV (vvMDV; strains Md5 and 612). Birds were monitored until 8 wk of age, and tested for MD incidence. Experiment 2 consisted of 3 trials. In each trial, d 18 broiler embryos were injected in ovo with either saline or FM to measure hatchability and gastrointestinal bacterial composition. In Experiment 3, d 18 broiler embryos were injected in ovo with either saline or FM. All chickens that hatched were orally gavaged with SE at hatch and kept for 7 d to monitor post‐hatch BW. No significant difference (P > 0.05) between MD percentage in birds vaccinated with HVT alone or HVT + FM were observed in Experiment 1. In Experiment 2, probiotic did not negatively affect hatchability, but did reduce lactose positive Gram‐negative bacteria. Further, increase in BW was associated with higher villi surface area in the ileum in chickens that received the probiotic as well as a significant reduction in the SE incidence in Experiment 3. These results suggest that in ovo administration of FM does not negatively impact the ability of HVT to protect against MD or hatchability of chickens, but improves BW during the first 7 d of life and decreases SE recovery in chickens.
The Acceptance of Product Recommendations from Web-Based Word-of-Mouth Systems: Effects of Information, Informant and System Characteristics

The study examines the consumer’s acceptance of product recommendations from web-based word-of-mouth systems (WWOMS). Conceptualizing WWOMS as an informant-mediated persuasive environment that comprises many communication elements and drawing on the accessibility-diagnosticity model and the theories of informant-mediated communications, this study identifies the critical roles of WWOMS information diagnosticity and WWOMS informant expertise and trustworthiness and their antecedents in influencing the consumer’s acceptance/rejection of WWOMS recommendations. It also examines the effects of unique WWOMS mechanisms such as helpfulness indicators and informant status indicators. An experiment was carried out to test the propositions empirically. Theoretically, this study fills the current knowledge void regarding the consumer’s processing and usage of information and recommendation from WWOMS. It also enhances the word-of-mouth literature by contributing new insights of electronic WOM. Practically, the paper sheds light on how to design WWOMS to promote recommendation acceptance and electronic transactions.
An active rectifier with optimal flip timing for the internal capacitor for piezoelectric vibration energy harvesting

This paper presents an active rectifier, which aims to extract maximum power from piezoelectric generators for vibration energy harvesting. A nonlinear impedance matching scheme called Synchronized Switch Harvesting on Inductor (SSHI) is highly effective [1]. However, control of the internal capacitor flip timing is complicated to result in a complex controller or suboptimal flip timing. We proposed an active rectifier based on the series SSHI configuration [2]. It ensures an optimal capacitor flip timing, yet the controller is simple to dissipate low power and hence achieve high efficiency. One potential problem of the series SSHI scheme is a non-robust operation due to parasitics and a variety of characteristics of the piezoelectric generators. We present an improved rectifier, which address the problem. The improved rectifier is designed in 0.25 μm BiCMOS process. Post-layout simulation results indicate robust operation and high efficiency of 93%, which is comparable to the original design in [2] and far higher than other existing SSHI rectifiers reported.
Controls on spatial and temporal variations in sand delivery to salmonid spawning riffles

Fine sediment infiltration into gravel interstices is known to be detrimental to incubating salmonid embryos. Infiltration into spawning riffles can show large spatial variations at the scale of a morphological unit and over time, with significant implications for embryo survival. Furthermore, some process‐based infiltration studies, and incubation‐to‐emergence models assume that fines are delivered to redds via suspension rather than bedload. This process‐based 12‐month study examined spatial patterns of predominantly sand infiltration into gravels in an upland trout stream, using infiltration baskets. An assessment of Rouse numbers for infiltrated sand indicated that it was transported predominantly as bedload at flow peaks. Clear temporal and spatial patterns existed, with highest rates of infiltration strongly associated with higher discharges (r2 = 0.7, p < .05). Seasonal variations in the delivery of different grain sizes were also a feature, with enhanced contributions of 0.5–2 mm sediment during elevated winter flows and 0.125–0.5 mm sediment during spring and summer; the latter is potentially harmful to the later stages of embryo incubation. Clear spatial patterns were also evident across riffles, with highest rates of infiltration tending to occur in areas of lower relative roughness—the areas competent to transport sand for longer periods. Incubation‐to‐emergence models should take into consideration spatial patterns of fine sediment dynamics at the pool–riffle scale, to improve prediction.
Hydrocephalus, Situs Inversus, Chronic Sinusitis, and Male Infertility in DNA Polymerase λ-Deficient Mice: Possible Implication for the Pathogenesis of Immotile Cilia Syndrome

ABSTRACT A growing number of DNA polymerases have been identified, although their physiological function and relation to human disease remain mostly unknown. DNA polymerase λ (Pol λ; also known as Pol β2) has recently been identified as a member of the X family of DNA polymerases and shares 32% amino acid sequence identity with DNA Pol β within the polymerase domain. With the use of homologous recombination, we generated Pol λ−/− mice. Pol λ−/− mice develop hydrocephalus with marked dilation of the lateral ventricles and exhibit a high rate of mortality after birth, although embryonic development appears normal. Pol λ−/− mice also show situs inversus totalis and chronic suppurative sinusitis. The surviving male, but not female, Pol λ−/− mice are sterile as a result of spermatozoal immobility. Microinjection of sperm from male Pol λ−/− mice into oocytes gives rise to normal offspring, suggesting that the meiotic process is not impaired. Ultrastructural analysis reveals that inner dynein arms of cilia from both the ependymal cell layer and respiratory epithelium are defective, which may underlie the pathogenesis of hydrocephalus, situs inversus totalis, chronic sinusitis, and male infertility. Sensitivity of Pol λ−/− cells to various kinds of DNA damage is indistinguishable from that of Pol λ+/+ cells. Collectively, Pol λ−/− mice may provide a useful model for clarifying the pathogenesis of immotile cilia syndrome.
Identifying Crosscutting Concerns Using Fan-In Analysis

Aspect mining is a reverse engineering process that aims at finding crosscutting concerns in existing systems. This article proposes an aspect mining approach based on determining methods that are called from many different places, and hence have a high fan-in, which can be seen as a symptom of crosscutting functionality. The approach is semiautomatic, and consists of three steps: metric calculation, method filtering, and call site analysis. Carrying out these steps is an interactive process supported by an Eclipse plug-in called FINT. Fan-in analysis has been applied to three open source Java systems, totaling around 200,000 lines of code. The most interesting concerns identified are discussed in detail, which includes several concerns not previously discussed in the aspect-oriented literature. The results show that a significant number of crosscutting concerns can be recognized using fan-in analysis, and each of the three steps can be supported by tools.
Extra‐cerebral oxygenation influence on near‐infrared‐spectroscopy‐determined frontal lobe oxygenation in healthy volunteers: a comparison between INVOS‐4100 and NIRO‐200NX

Frontal lobe oxygenation (ScO2) is assessed by spatially resolved near‐infrared spectroscopy (SR‐NIRS) although it seems influenced by extra‐cerebral oxygenation. We aimed to quantify the impact of extra‐cerebral oxygenation on two SR‐NIRS derived ScO2.
Hedging Your Bets: Explaining Executives' Market Labeling Strategies in Nanotechnology

Executives use market labels to position their firms within market categories. Yet this activity has been given scarce attention in the extant literature that widely assumes that market labels are simple, prescribed classification brackets that accurately represent firms' characteristics. By examining how and why executives use the nanotechnology label, we uncover three strategies: claiming, disassociating, and hedging. Comparing these strategies to firms' technological capabilities, we find that capabilities alone do not explain executives' label use. Instead, the data show that these strategies are driven by executives' aspiration to symbolically influence their firms' market categorization. In particular, executives' perception of the label's ambiguity, their avoidance of perceived credibility gaps, and their assessment of the label's signaling value shape their labeling strategies. In contrast to extant research, which suggests that executives should aim for coherence, we find that many executives hedge their affiliation with a nascent market label. Thus, our study shows that in ambiguous contexts, noncommitment to a market category may be a particularly prevalent strategy.
Effects of growth hormone supplementation on left ventricular morphology and myocyte function with the development of congestive heart failure.

BACKGROUND Release of growth hormone (GH), putatively through alterations in insulin growth factor-1 (IGF-1) levels, has been implicated to influence left ventricular (LV) myocardial structure and function. The objective of this study was to determine contributory mechanisms by which GH supplementation may influence LV function with the development of congestive heart failure (CHF). METHODS AND RESULTS Pigs were assigned to the following groups: (1) chronic pacing at 240 bpm for 3 weeks (n = 10), (2) chronic pacing and GH supplementation (200 microg x kg(-1) x d(-1), n = 10), and (3) controls (n = 8). GH treatment increased IGF-1 plasma levels by nearly 2.5-fold throughout the pacing protocol. In the untreated pacing CHF group, LV fractional shortening was reduced and peak wall stress increased. In the pacing CHF and GH groups, LV fractional shortening was higher and LV wall stress lower than untreated CHF values. Steady-state myocyte velocity of shortening was reduced with pacing CHF and was unchanged from CHF values with GH treatment. In the presence of 25 nmol/L isoproterenol, the change in myocyte shortening velocity was reduced in the untreated CHF group and increased in the GH-treated group. LV sarcoplasmic reticulum Ca(2+)-ATPase abundance was reduced with pacing CHF but was normalized with GH treatment. CONCLUSIONS Short-term GH supplementation improved LV pump function in pacing CHF as a result of favorable effects on LV remodeling and contractile processes. Thus, GH supplementation may serve as a novel therapeutic modality in developing CHF.