Miracle-dz/UniFAR-FTUs huggingface dataset:
Mycotoxins, trace elements, and phthalates in marketed rice of different origin and exposure assessment

ABSTRACT The aim of this study was to determine levels of 11 mycotoxins, 10 trace elements, and 6 phthalates in rice samples from Serbian and Chinese market. Mycotoxins were not detected in any of the analysed rice samples. Results revealed similar median levels for following elements: Mn, 17.5 and 15.7 mg kg−1; Fe, 2.47 and 2.12 mg kg−1; Cu, 1.95 and 1.59 mg kg−1 in marketed samples from Serbia and China, respectively. Median concentration of Ni in Serbian marketed samples was 1.9 times higher than in Chinese ones. The median levels (µg kg−1) of phthalates ranged from 1.2 (benzylbutyl phthalate [BBP]) – 566 (di(2-ethyl-hexyl) phthalate [DEHP]) and 1.7 (BBP) – 348 (DEHP) in Serbian and Chinese marketed samples, respectively. The results were used to assess daily exposure of Serbian and Chinese adult consumers. The calculated target hazard quotients indicated that the potential risk attributable to the analysed contaminants in rice samples should not be of concern neither for the Serbian nor the Chinese consumers.
Right Colectomy for Cancer: A Matched Comparison of Three Different Surgical Approaches

ABSTRACT Purpose. The standard approach to right colon cancer resection is still a matter of debate and includes laparoscopy, open midline incision, or open transverse incision. We aimed this study to compare the short- and long-term results of laparoscopic right-colectomy with those provided by the open approaches. Methods. Of the 176 patients who underwent right-colectomy at our Department for nonmetastatic colon cancer, 40 patients treated by laparoscopy, 40 treated by transverse incisions, and 40 treated by midline incisions were selected and matched using the propensity score method. Short-term results included: operating time, morbidity rate, number of lymph-nodes harvested (LNH), patients’ recovery features, and costs. Long-term results included: disease-specific survivals and the rate of incisional hernias. The sub-groups were compared using t-test and Chi-square tests, whereas the Kaplan-Meier method was used to assess survivals. Results. Laparoscopies were the longer procedures, providing similar morbidity rates and LNH in comparison with the open approaches. Laparoscopy provided a faster return to oral intake and a shorter use of analgesics comparing with the midline approach; however, it showed only a minor consumption of analgesics in comparison with transverse laparotomy. There were no differences in the hospital stay and the long-term results were comparable between sub-groups. Costs analysis documented minor but not significant surgical expenses for the transverse approach. Conclusions. Laparoscopy was documented safe, with similar morbidity rates and long-term results comparing with open surgery. Laparoscopy provided better functional short-term results comparing with the midline approach, but only small differences with respect to the transverse incision approach.
Magnetic resonance imaging characteristics of ischemic brain infarction over time in a canine stroke model

This study describes magnetic resonance imaging (MRI) results and changes in lateral ventricular size over time in a canine ischemic stroke model. T1- and T2-weighted (T1W, T2W) imaging and fluid-attenuated inversion recovery (FLAIR) sequence MRI were performed at 3 h and 3, 8, and 35 days after brain infarct induction. Diffusion-weighted imaging (DWI) and apparent diffusion coefficient (ADC) mapping were performed at 8 and 35 days. A total of 29 brain lesions were induced successfully in 12 of 14 beagle dogs. At 3 h, T2W and FLAIR detected hyperintense lesions in three randomly selected dogs. On T1W, all lesions appeared hypointense to isointense at 3 h, isointense (18/29) or hypointense (11/29) at 3 days, hypointense to isointense with peripheral hyperintensity (24/26) at 8 days, and hypointense (18/26) at 35 days. Infarcts on DWI/ADC were hypointense to isointense centrally, with the periphery hyperintense/hyperintense (17/26) at 8 days and hypointense/hyperintense (19/26) at 35 days. A marked increase in lateral ventricular size was observed in dogs with cerebral infarcts. In conclusion, T2W and FLAIR were useful for detecting early stage (3 h to 3 days) brain infarction. T1W and DWI were useful for detecting neuronal necrosis and providing supplemental information for phase evaluation.
Evolutionary Origin, Gradual Accumulation and Functional Divergence of Heat Shock Factor Gene Family with Plant Evolution

Plants, as sessile organisms, evolved a complex and functionally diverse heat shock factor (HSF) gene family to cope with various environmental stresses. However, the limited evolution studies of the HSF gene family have hindered our understanding of environmental adaptations in plants. In this study, a comprehensive evolution analysis on the HSF gene family was performed in 51 representative plant species. Our results demonstrated that the HSFB group which lacks a typical AHA activation domain, was the most ancient, and is under stronger purifying selection pressure in the subsequent evolutionary processes. While, dramatic gene expansion and functional divergence occurred at evolution timescales corresponding to plant land inhabit, which contribute to the emergence and diversification of the HSFA and HSFC groups in land plants. During the plant evolution, the ancestral functions of HSFs were maintained by strong purifying pressure that acted on the DNA binding domain, while the variable oligomerization domain and motif organization of HSFs underwent functional divergence and generated novel subfamilies. At the same time, variations were further accumulated with plant evolution, and this resulted in remarkable functional diversification among higher plant lineages, including distinct HSF numbers and selection pressures of several HSF subfamilies between monocots and eudicots, highlighting the fundamental differences in different plant lineages in response to environmental stresses. Taken together, our study provides novel insights into the evolutionary origin, pattern and selection pressure of plant HSFs and delineates critical clues that aid our understanding of the adaptation processes of plants to terrestrial environments.
The area of real contact and the shear strength of monomolecular layers of a boundary lubricant

A method has been developed by which molecularly smooth surfaces may be placed together and the area of contact formed between them measured. Selected sheets of mica were cleaved to be free from cleavage steps on both sides of the sheets. These were bowed up and mounted as crossed cylinders in an apparatus in which normal and tangential loads could be applied. The area of contact formed between the surfaces has been examined using multiple-beam interference techniques. Examination of the hue and intensity of the central region of the interferograms enables a separation of the mica sheets to be detected even if this is of only a few ångströms. This means that the boundary of the region of contact may be determined with a greater precision than has hitherto been possible. Fringes of equal chromatic order provide a sensitive means for the detection of small particles of accidental contamination and have been used to show when the contact is intimate over the whole region. Normal and tangential forces have been applied to the mica specimens, both when in a clean condition and when covered with a monomolecular layer of calcium stearate. The area of contact was observed simultaneously. The area and the force required to shear it being known, the shear strength of the junctions has been calculated. The damage occurring during the process has been examined using reflexion electron microscopy. At certain values of the tangential force smooth sliding takes place on the lubricated surfaces and no surface damage can be detected. Further increase of the tangential force produces a rapid slip causing fragments to be torn out of the surface and some damage occurs. No smooth sliding was detected on unlubricated surfaces of mica and the damage produced during the slip was extensive. The force required to shear the junction formed between clean smooth mica surfaces is very high. A value of 10 Kg/mm2has been obtained. For the monomolecular layers of calcium stearate the value obtained is about forty times lower but is by no means negligible. This means that a considerable force is required to shear a film of boundary lubricant and accounts for the otherwise unexplained observation that when metals are lubricated with a single molecular layer of soap or fatty acid the frictional force is reduced by only a factor of 10 while the wear decreases by a factor of 10000 or more.
The carbon cycle in Mexico: past, present and future of C stocks and fluxes

Abstract. We modeled the carbon (C) cycle in Mexico with a process-based approach. We used different available products (satellite data, field measurements, models and flux towers) to estimate C stocks and fluxes in the country at three different time frames: present (defined as the period 2000–2005), the past century (1901–2000) and the remainder of this century (2010–2100). Our estimate of the gross primary productivity (GPP) for the country was 2137 ± 1023 TgC yr−1 and a total C stock of 34 506 ± 7483 TgC, with 20 347 ± 4622 TgC in vegetation and 14 159 ± 3861 in the soil. Contrary to other current estimates for recent decades, our results showed that Mexico was a C sink over the period 1990–2009 (+31 TgC yr−1) and that C accumulation over the last century amounted to 1210 ± 1040 TgC. We attributed this sink to the CO2 fertilization effect on GPP, which led to an increase of 3408 ± 1060 TgC, while both climate and land use reduced the country C stocks by −458 ± 1001 and −1740 ± 878 TgC, respectively. Under different future scenarios, the C sink will likely continue over the 21st century, with decreasing C uptake as the climate forcing becomes more extreme. Our work provides valuable insights on relevant driving processes of the C cycle such as the role of drought in drylands (e.g., grasslands and shrublands) and the impact of climate change on the mean residence time of soil C in tropical ecosystems.
A Multi-Band Body-Worn Distributed Radio-Frequency Exposure Meter: Design, On-Body Calibration and Study of Body Morphology

A multi-band Body-Worn Distributed exposure Meter (BWDM) calibrated for simultaneous measurement of the incident power density in 11 telecommunication frequency bands, is proposed. The BDWM consists of 22 textile antennas integrated in a garment and is calibrated on six human subjects in an anechoic chamber to assess its measurement uncertainty in terms of 68% confidence interval of the on-body antenna aperture. It is shown that by using multiple antennas in each frequency band, the uncertainty of the BWDM is 22 dB improved with respect to single nodes on the front and back of the torso and variations are decreased to maximum 8.8 dB. Moreover, deploying single antennas for different body morphologies results in a variation up to 9.3 dB, which is reduced to 3.6 dB using multiple antennas for six subjects with various body mass index values. The designed BWDM, has an improved uncertainty of up to 9.6 dB in comparison to commercially available personal exposure meters calibrated on body. As an application, an average incident power density in the range of 26.7–90.8 μW·m−2 is measured in Ghent, Belgium. The measurements show that commercial personal exposure meters underestimate the actual exposure by a factor of up to 20.6.
Steady γ-Ray Effects on the Performance of PPP-BOTDA and TW-COTDR Fiber Sensing

We investigated the evolution of the performances of Pulse Pre Pump-Brillouin Time Domain Analysis (PPP-BOTDA) and Tunable Wavelength Coherent Optical Time Domain Reflectometry (TW-COTDR) fiber-based temperature and strain sensors when the sensing optical fiber is exposed to two γ-ray irradiation conditions: (i) at room temperature and a dose rate of 370 Gy(SiO2)/h up to a total ionizing dose (TID) of 56 kGy; (ii) at room temperature and a dose rate of 25 kGy(SiO2)/h up to a TID of 10 MGy. Two main different classes of single-mode optical fibers have been tested in situ, radiation-tolerant ones: fluorine-doped or nitrogen-doped core fibers, as well as Telecom-grade germanosilicate ones. Brillouin and Rayleigh Sensitivities of N-Doped fibers were not reported yet, and these characterizations pave the way for a novel and alternative sensing scheme. Moreover, in these harsh conditions, our results showed that the main parameter affecting the sensor sensitivity remains the Radiation Induced Attenuation (RIA) at its operation wavelength of 1550 nm. RIA limits the maximal sensing range but does not influence the measurement uncertainty. F-doped fiber is the most tolerant against RIA with induced losses below 8 dB/km after a 56 kGy accumulated dose whereas the excess losses of other fibers exceed 22 dB/km. Both Rayleigh and Brillouin signatures that are exploited by the PPP-BOTDA and the TW-COTDR remain unchanged (within our experimental uncertainties). The strain and temperature coefficients of the various fibers under test are not modified by radiations, at these dose/dose rate levels. Consequently, this enables the design of a robust strain and temperature sensing architecture for the monitoring of radioactive waste disposals.
Doxycycline Ameliorates the Susceptibility to Aortic Lesions in a Mouse Model for the Vascular Type of Ehlers-Danlos Syndrome

The vascular form of Ehlers-Danlos syndrome (vEDS), a rare disease with grave complications resulting from rupture of major arteries, is caused by mutations of collagen type III [α1 chain of collagen type III (COL3A1)]. The only, recently proven, preventive strategy consists of the reduction of arterial wall stress by β-adrenergic blockers. The heterozygous (HT) Col3a1 knockout mouse has reduced expression of collagen III and recapitulates features of a mild presentation of the disease. The objective of this study was to determine whether changing the balance between synthesis and degradation of collagen by chronic treatment with doxycycline, a nonspecific matrix metalloproteinase (MMP) inhibitor, could prevent the development of vascular pathology in HT mice. After 3 months of treatment with doxycycline or placebo, 9-month-old HT or wild-type (WT) mice were subjected to surgical stressing of the aorta. A 3-fold increase in stress-induced aortic lesions found in untreated HT mice 1 week after intervention (cumulative score 4.5 ± 0.87 versus 1.3 ± 0.34 in WT, p < 0.001) was fully prevented in the doxycycline-treated group (1.1 ± 0.56, p < 0.001). Untreated HT mice showed increased MMP-9 activity in the carotid artery and decreased collagen content in the aorta; however, in doxycycline-treated animals there was normalization to the levels observed in WT mice. Doxycycline treatment inhibits the activity of tissue MMP and attenuates the decrease in the collagen content in aortas of mice haploinsufficient for collagen III, as well as prevents the development of stress-induced vessel pathology. The results suggest that doxycycline merits clinical testing as a treatment for vEDS.
Piglet colibacillosis diagnosis based on multiplex polymerase chain reaction and immunohistochemistry of paraffin-embedded tissues

Enterotoxigenic Escherichia coli (ETEC) causes diarrhea in pigs, referred to as colibacillosis. The aim of this study was to optimize multiplex polymerase chain reaction (PCR) and immunohistochemistry (IHC) analyses of paraffin-embedded material to detect pathogenic E. coli strains causing colibacillosis in pigs. Multiplex PCR was optimized for fimbriae (F18, F4, F6, F5, and F41) and toxins (types A and B heat-stable toxins [STaP and STb], heat-labile toxin [LT], and type 2 Shiga toxin [STx2e]), and IHC was optimized for an anti-E. coli polyclonal antibody. Samples (132) from pigs received between 2006 and 2014 with clinical and histopathological diagnoses of colibacillosis were analyzed. E. coli was detected by IHC in 78.7%, and at least one virulence factor gene was detected in 71.2%. Pathogenic strains of ETEC with at least one fimbria and one toxin were detected in 40% of the samples in multiplex PCR. The most frequent virulence types were F18-STaP (7.5%), F18-STaP-STb (5.7%), and F4-STaP (3.8%). A statistically significant association was noted between virulence factors F4, F18, STaP, and STb and positive immunostaining results. Colibacillosis diagnosis through multiplex PCR and IHC of paraffin-embedded tissues is a practical approach, as samples can be fixed and stored for long periods before analysis.
Integration and timing of basic and clinical sciences education

Background: Medical education has traditionally been compartmentalized into basic and clinical sciences, with the latter being viewed as the skillful application of the former. Over time, the relevance of basic sciences has become defined by their role in supporting clinical problem solving rather than being, of themselves, a defining knowledge base of physicians. Methods: As part of the national Future of Medical Education in Canada (FMEC MD) project, a comprehensive empirical environmental scan identified the timing and integration of basic sciences as a key pressing issue for medical education. Using the literature review, key informant interviews, stakeholder meetings, and subsequent consultation forums from the FMEC project, this paper details the empirical basis for focusing on the role of basic science, the evidentiary foundations for current practices, and the implications for medical education. Findings: Despite a dearth of definitive relevant studies, opinions about how best to integrate the sciences remain strong. Resource allocation, political power, educational philosophy, and the shift from a knowledge-based to a problem-solving profession all influence the debate. There was little disagreement that both sciences are important, that many traditional models emphasized deep understanding of limited basic science disciplines at the expense of other relevant content such as social sciences, or that teaching the sciences contemporaneously rather than sequentially has theoretical and practical merit. Innovations in integrated curriculum design have occurred internationally. Less clear are the appropriate balance of the sciences, the best integration model, and solutions to the political and practical challenges of integrated curricula. Discussion: New curricula tend to emphasize integration, development of more diverse physician competencies, and preparation of physicians to adapt to evolving technology and patients’ expectations. Refocusing the basic/clinical dichotomy to a foundational/applied model may yield benefits in training widely competent future physicians.
Some Acoustic and Aerodynamic Characteristics of Pharyngeal Consonants in Iraqi Arabic

Abstract The articulation of pharyngeal consonants in Arabic is still not fully understood. The production of these sounds by a small group of speakers of an Iraqi dialect was analysed by means of acoustic and aerodynamic techniques. It was found that both /ħ/ and /? / could be said to be produced by a constriction in the pharynx (whereby the possibility of epiglottal involvement cannot be excluded), but that laryngeal tension may also play an important role. Vowels preceded or followed by pharyngeals have lowered and centralized allophones. High rates of airflow for /ħ/ may be facilitated by lowering the velum. Both sounds could be regarded as approximants, formed in a region of the vocal tract where true fricatives are very difficult to produce.
Cache policies for linear utility maximization

Cache policies to minimize the content retrieval cost have been studied through competitive analysis when the miss costs are additive and the sequence of content requests is arbitrary. More recently, a cache utility maximization problem has been introduced, where contents have stationary popularities and utilities are strictly concave in the hit rates. This paper bridges the two formulations, considering linear costs and content popularities. We show that minimizing the retrieval cost corresponds to solving an online knapsack problem, and we propose new dynamic policies inspired by simulated annealing, including DynqLRU, a variant of qLRU. For such policies we prove asymptotic convergence to the optimum under the characteristic time approximation. In a real scenario, popularities vary over time and their estimation is very difficult. DynqLRU does not require popularity estimation, and our realistic, trace-driven evaluation shows that it significantly outperforms state-of-the-art policies, with up to 45% cost reduction.
Race Differences in Linking Family Formation Transitions to Women’s Mortality

We examine how the timing and sequencing of first marriage and childbirth are related to mortality for a cohort of 4,988 white and black women born between 1922 and 1937 from the National Longitudinal Survey of Mature Women. We use Cox proportional hazard models to estimate race differences in the association between family formation transitions and mortality. Although we find no relationships between marital histories and longevity, we do find that having children, the timing of first birth, and the sequencing of childbirth and marriage are associated with mortality. White women who had children lived longer than those who had none, but the opposite was found for black women. The effects of birth timing also differed by race; delaying first birth to older ages was protective for white women but not black women. These results underscore the importance of social context in the study of life course transitions.
Effect of Tangential Loading on Critical Conditions for Radial Cracking in Brittle Coatings

Results of Hertzian contact tests investigating the effects of superposed tangential loads on the critical conditions for radial cracking at the undersurfaces of brittle coatings on compliant substrates are reported. It is demonstrated that these effects are secondary, so that conventional normal indentation remains an appropriate test procedure for characterizing this highly deleterious mode of coating fracture under a wide range of complex loading conditions.
Joint Hand Detection and Rotation Estimation by Using CNN

Hand detection is essential for many hand related tasks, e.g. parsing hand pose, understanding gesture, which are extremely useful for robotics and human-computer interaction. However, hand detection in uncontrolled environments is challenging due to the flexibility of wrist joint and cluttered background. We propose a deep learning based approach which detects hands and calibrates in-plane rotation under supervision at the same time. To guarantee the recall, we propose a context aware proposal generation algorithm which significantly outperforms the selective search. We then design a convolutional neural network(CNN) which handles object rotation explicitly to jointly solve the object detection and rotation estimation tasks. Experiments show that our method achieves better results than state-of-the-art detection models on widely-used benchmarks such as Oxford and Egohands database. We further show that rotation estimation and classification can mutually benefit each other.