Miracle-dz/UniFAR-FTUs huggingface dataset:
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This manuscript explores the possibility of using numerical modelling to hint the morphology of fractures by comparing them with results from laboratory experiments. The modeling is accomplished using DEM methods able to recreate a reliable shape of fracture surfaces, then compared to natural fracture surface from lab experiments. The Authors claim to have explored this comparison in the various stress conditions, yet due to the small size of the generated natural fractures, this comparison is restricted to the two experiments developed in tri-axial conditions. This significantly reduces the impact of the manuscript, that may correctly focus on the used comparisons and requires a more focused title and abstract.
A new method for determining the availability of choline in soybean meal.

Studies were conducted to evaluate the availability of choline in soybean meal, using a new approach: The basal diet contained soybean meal with a lowered choline content (partially extracted with methanol). Choline was added to the basal diet 1) by substituting intact soybean meal for the methanol washed soybean meal; or 2) from crystalline choline Cl. Four experiments were conducted with day-old male broilers housed in battery brooders and fed the experimental diets from 4 to 18 d posthatching. The basal diet contained corn, soybean meal, and isolated soy protein in Experiments 1 to 3, and also glucose in Experiment 4. In Experiment 1, chicks fed the basal diet (1,140 mg/kg choline, 0.61% sulfur amino acids) had a growth response to 1,000 mg/kg choline or 0.10% methionine (P < 0.05), but not to 0.10% cysteine (P > 0.05) supplementation. Supplementation of choline (0, 50, 100, 200, 400, 800, and 1,200 mg/kg) to the basal diet (1,230 mg/kg choline) in Experiment 2 resulted in a linear increase in growth up to 122 +/- 22 mg/kg supplemental choline (1,352 +/- 22 mg/kg total choline), reaching a plateau after that. In the slope ratio assays to determine choline availability, the basal diets in Experiments 3 (1,098 mg/kg choline) and 4 (920 mg/kg choline) were supplemented with either 50 or 100 mg/ kg choline (from choline Cl) or had approximately 50 or 100 mg/kg choline added with intact soybean meal (at the expense of washed soybean meal). There were significant linear responses of weight gain vs choline intake from either source (P < 0.001). The availability of choline in soybean meal was calculated to be 97 and 105% in Experiments 3 and 4, respectively. These results indicate that choline availability in soybean meal is close to 100%.
Does Parkinson's disease start in the gut?

ABSTRACT Current understanding of the pathophysiology of Parkinson's disease suggests a key role of the accumulation of alpha-synuclein in the pathogenesis. This critical review highlights major landmarks, hypotheses and controversies about the origin and progression of synucleinopathy in Parkinson's disease, leading to an updated review of evidence suggesting the enteric nervous system might be the starting point for the whole process. Although accumulating and compelling evidence favors this theory, the remaining knowledge gaps are important points for future studies.
Graspan: A Single-machine Disk-based Graph System for Interprocedural Static Analyses of Large-scale Systems Code

There is more than a decade-long history of using static analysis to find bugs in systems such as Linux. Most of the existing static analyses developed for these systems are simple checkers that find bugs based on pattern matching. Despite the presence of many sophisticated interprocedural analyses, few of them have been employed to improve checkers for systems code due to their complex implementations and poor scalability. In this paper, we revisit the scalability problem of interprocedural static analysis from a "Big Data" perspective. That is, we turn sophisticated code analysis into Big Data analytics and leverage novel data processing techniques to solve this traditional programming language problem. We develop Graspan, a disk-based parallel graph system that uses an edge-pair centric computation model to compute dynamic transitive closures on very large program graphs. We implement context-sensitive pointer/alias and dataflow analyses on Graspan. An evaluation of these analyses on large codebases such as Linux shows that their Graspan implementations scale to millions of lines of code and are much simpler than their original implementations. Moreover, we show that these analyses can be used to augment the existing checkers; these augmented checkers uncovered 132 new NULL pointer bugs and 1308 unnecessary NULL tests in Linux 4.4. 0-rc5, PostgreSQL 8.3. 9, and Apache httpd 2.2. 18.
The cellular basis of platelet secretion: Emerging structure/function relationships

Abstract Platelet activation has long been known to be accompanied by secretion from at least three types of compartments. These include dense granules, the major source of small molecules; α-granules, the major protein storage organelle; and lysosomes, the site of acid hydrolase storage. Despite ~60 years of research, there are still many unanswered questions about the cell biology of platelet secretion: for example, how are these secretory organelles organized to support cargo release and what are the key routes of cargo release, granule to plasma membrane or granule to canalicular system. Moreover, in recent years, increasing evidence points to the platelet being organized for secretion of the contents from other organelles, namely the dense tubular system (endoplasmic reticulum) and the Golgi apparatus. Conceivably, protein secretion is a widespread property of the platelet and its organelles. In this review, we concentrate on the cell biology of the α-granule and its structure/function relationships. We both review the literature and discuss the wide array of 3-dimensional, high-resolution structural approaches that have emerged in the last few years. These have begun to reveal new and unanticipated outcomes and some of these are discussed. We are hopeful that the next several years will bring rapid advances to this field that will resolve past controversies and be clinically relevant.
Image Synthesis in Multi-Contrast MRI With Conditional Generative Adversarial Networks

Acquiring images of the same anatomy with multiple different contrasts increases the diversity of diagnostic information available in an MR exam. Yet, the scan time limitations may prohibit the acquisition of certain contrasts, and some contrasts may be corrupted by noise and artifacts. In such cases, the ability to synthesize unacquired or corrupted contrasts can improve diagnostic utility. For multi-contrast synthesis, the current methods learn a nonlinear intensity transformation between the source and target images, either via nonlinear regression or deterministic neural networks. These methods can, in turn, suffer from the loss of structural details in synthesized images. Here, in this paper, we propose a new approach for multi-contrast MRI synthesis based on conditional generative adversarial networks. The proposed approach preserves intermediate-to-high frequency details via an adversarial loss, and it offers enhanced synthesis performance via pixel-wise and perceptual losses for registered multi-contrast images and a cycle-consistency loss for unregistered images. Information from neighboring cross-sections are utilized to further improve synthesis quality. Demonstrations on T1- and T2- weighted images from healthy subjects and patients clearly indicate the superior performance of the proposed approach compared to the previous state-of-the-art methods. Our synthesis approach can help improve the quality and versatility of the multi-contrast MRI exams without the need for prolonged or repeated examinations.
Influence of electrospinning parameters on poly(hydroxybutyrate) electrospun membranes fiber size and distribution

Poly(hydroxybutyrate) (PHB) obtained from sugar cane waste was dissolved in a blend of chloroform and dimethylformamide (DMF) and electrospun at 40°C. By adding DMF to the solution, the electrospinning process for the PHB polymer becomes more stable, allowing complete polymer crystallization during the jet travelling between the tip and the grounded collector. The influence of processing parameters on fiber size and distribution was systematically studied. It was observed that an increase of tip inner diameter promotes a decrease of the fiber average size and a broader distribution. Conversely, an increase of the electric field and flow rate produces an increase of fiber diameter until a maximum of ∼2.0 µm but for electric fields higher than 1.5 kV cm−1, a decrease of the fiber diameter was observed. Polymer crystalline phase seems to be independent of the processing conditions and a crystallinity degree of 53% was found. Moreover, thermal degradation of the as-spun membrane occurs in single step degradation with activation energy of 91 kJ mol−1. Furthermore, MC-3T3-E1 cell adhesion was not inhibited by the fiber mats preparation, indicating their potential use for biomedical applications. POLYM. ENG. SCI., 54:1608–1617, 2014. © 2013 Society of Plastics Engineers
Metronomic Chemotherapy vs Best Supportive Care in Progressive Pediatric Solid Malignant Tumors: A Randomized Clinical Trial

Importance Although oral metronomic chemotherapy is often used in progressive pediatric solid malignant tumors, a literature review reveals that only small single-arm retrospective or phase 1 and 2 studies have been performed. Skepticism abounds because of the lack of level 1 evidence. Objectives To compare the effect of metronomic chemotherapy on progression-free survival (PFS) with that of placebo in pediatric patients with primary extracranial, nonhematopoietic solid malignant tumors that progress after at least 2 lines of chemotherapy. Design, Setting, and Participants A double-blinded, placebo-controlled randomized clinical trial was conducted from October 1, 2013, through December 31, 2015, at the cancer center at All India Institute of Medical Sciences in children aged 5 to 18 years with primary extracranial, nonhematopoietic solid malignant tumors that progressed after at least 2 lines of chemotherapy and had no further curative options. Interventions One arm received a 4-drug oral metronomic regimen of daily celecoxib and thalidomide with alternating periods of etoposide and cyclophosphamide, whereas the other arm received placebo. Disease status was assessed at baseline, 9 weeks, 18 weeks, and 27 weeks or at clinical progression. Main Outcomes and Measures The primary end point was PFS as defined by the proportion of patients without disease progression at 6 months, and PFS duration and overall survival (OS) were secondary end points. Results A total of 108 of the 123 patients screened were enrolled, with 52 randomized to the placebo group (median age, 15 years; 40 male [76.9%]) and 56 to the metronomic chemotherapy group (median age, 13 years; 42 male [75.0%]). At a median follow-up of 2.9 months, 100% of the patients had disease progression by 6 months in the placebo group vs 96.4% in the metronomic chemotherapy group (P = .24). Median PFS and OS in the 2 groups was similar (hazard ratio [HR], 0.69; 95% CI, 0.47-1.03 [P = .07] for PFS; and HR, 0.74; 95% CI, 0.50-1.09 [P = .13] for OS). In post hoc subgroup analysis, cohorts receiving more than 3 cycles (HR for PFS, 0.46; 95% CI, 0.23-0.93; P = .03) and those without a bone sarcoma (ie, neither primitive neuroectodermal tumor nor osteosarcoma) (HR for PFS, 0.39; 95% CI, 0.18-0.81; P = .01) appeared to benefit from metronomic chemotherapy. Conclusions and Relevance Metronomic chemotherapy does not improve 6-month PFS, compared with placebo, among pediatric patients with extracranial progressive solid malignant tumors . However, patients without bone sarcoma and those able to tolerate therapy for more than 3 cycles (9 weeks) benefit. Trial Registration clinicaltrials.gov Identifier: NCT01858571.
Aripiprazole for cocaine abstinence: a randomized–controlled trial with ecological momentary assessment

Aripiprazole blocks psychostimulant seeking in a rat model of relapse. However, in humans, it may increase ongoing use. We tested aripiprazole specifically for relapse prevention. Methadone-maintained outpatients who were abstinent from cocaine in weeks 11–12 were randomized to double-blind aripiprazole (15 mg daily) or placebo in weeks 13–27 after 12 weeks of contingency management. Participants reported craving through ecological momentary assessment. We stopped the trial because very few (18/41) participants fulfilled the abstinence criterion. The results suggested that aripiprazole delayed lapse [hazard ratio (HR)=0.45, 95% confidence interval (CI)=0.14–1.42, P=0.17] and relapse (HR=0.31, 95% CI=0.07–1.27, P=0.10), but the effects did not reach statistical significance. Unexpectedly, the proportion of participants reporting cocaine craving was higher in the aripiprazole group (Fisher’s exact P=0.026), although the frequency of craving was similar in the aripiprazole and placebo groups (1.89 vs. 1.16%, reffect=0.43, 95% CI=−0.08−0.76). The results suggest that in recently abstinent cocaine users, aripiprazole might delay relapse, but might also slightly increase craving. Difficulty in trial implementation underscores the fact that initial abstinence from cocaine is not a trivial hurdle.
The Politics, Power, and Pathologies of International Organizations

International Relations scholars have vigorous theories to explain why international organizations (IOs) are created, but they have paid little attention to IO behavior and whether IOs actually do what their creators intend. This blind spot flows logically from the economic theories of organization that have dominated the study of international institutions and regimes. To recover the agency and autonomy of IOs, we offer a constructivist approach. Building on Max Weber's well-known analysis of bureaucracy, we argue that IOs are much more powerful than even neoliberals have argued, and that the same characteristics of bureaucracy that make IOs powerful can also make them prone to dysfunctional behavior. IOs are powerful because, like all bureaucracies, they make rules, and, in so doing, they create social knowledge. IOs deploy this knowledge in ways that define shared international tasks, create new categories of actors, form new interests for actors, and transfer new models of political organization around the world. However, the same normative valuation on impersonal rules that defines bureaucracies and makes them powerful in modern life can also make them unresponsive to their environments, obsessed with their own rules at the expense of primary missions, and ultimately produce inefficient and self-defeating behavior. Sociological and constructivist approaches thus allow us to expand the research agenda beyond IO creation and to ask important questions about the consequences of global bureaucratization and the effects of IOs in world politics.
Fifty shades of gradients: does the pressure gradient in venous sinus stenting for idiopathic intracranial hypertension matter? A systematic review.

OBJECTIVEThe role of venous sinus stenting (VSS) for idiopathic intracranial hypertension (IIH) is not well understood. The aim of this systematic review is to attempt to identify subsets of patients with IIH who will benefit from VSS based on the pressure gradients of their venous sinus stenosis.METHODSMEDLINE/PubMed was searched for studies reporting venous pressure gradients across the stenotic segment of the venous sinus, pre- and post-stent pressure gradients, and clinical outcomes after VSS. Findings are reported according to the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines.RESULTSFrom 32 eligible studies, a total of 186 patients were included in the analysis. Patients who had favorable outcomes had higher mean pressure gradients (22.8 ± 11.5 mm Hg vs 17.4 ± 8.0 mm Hg, p = 0.033) and higher changes in pressure gradients after stent placement (19.4 ± 10.0 mm Hg vs 12.0 ± 6.0 mm Hg, p = 0.006) compared with those with unfavorable outcomes. The post-stent pressure gradients between the 2 groups were not significantly different (2.8 ± 4.0 mm Hg vs 2.7 ± 2.0 mm Hg, p = 0.934). In a multivariate stepwise logistic regression controlling for age, sex, body mass index, CSF opening pressure, pre-stent pressure gradient, and post-stent pressure gradient, the change in pressure gradient with stent placement was found to be an independent predictor of favorable outcome (p = 0.028). Using a pressure gradient of 21 as a cutoff, 81/86 (94.2%) of patients with a gradient > 21 achieved favorable outcomes, compared with 82/100 (82.0%) of patients with a gradient ≤ 21 (p = 0.022). CONCLUSIONSThere appears to be a relationship between the pressure gradient of venous sinus stenosis and the success of VSS in IIH. A randomized controlled trial would help elucidate this relationship and potentially guide patient selection.
MobileWorks: Designing for Quality in a Managed Crowdsourcing Architecture

Online labor marketplaces offer the potential to automate tasks too difficult for computers, but don't always provide accurate results. MobileWorks is a crowd platform that departs from the marketplace model to provide robust, high-accuracy results using three new techniques. A dynamic work-routing system identifies expertise in the crowd and ensures that posted work completes within a bounded time with fair wages. A peer-management system helps prevent wrong answers. Last, social interaction techniques let best workers manage and teach other crowd members. This process allows the crowd to collaboratively learn how to solve new tasks.
Model-Based Value Estimation for Efficient Model-Free Reinforcement Learning

Recent model-free reinforcement learning algorithms have proposed incorporating learned dynamics models as a source of additional data with the intention of reducing sample complexity. Such methods hold the promise of incorporating imagined data coupled with a notion of model uncertainty to accelerate the learning of continuous control tasks. Unfortunately, they rely on heuristics that limit usage of the dynamics model. We present model-based value expansion, which controls for uncertainty in the model by only allowing imagination to fixed depth. By enabling wider use of learned dynamics models within a model-free reinforcement learning algorithm, we improve value estimation, which, in turn, reduces the sample complexity of learning.
From Rapid Place Learning to Behavioral Performance: A Key Role for the Intermediate Hippocampus

Rapid place encoding by hippocampal neurons, as reflected by place-related firing, has been intensely studied, whereas the substrates that translate hippocampal place codes into behavior have received little attention. A key point relevant to this translation is that hippocampal organization is characterized by functional–anatomical gradients along the septotemporal axis: Whereas the ability of hippocampal neurons to encode accurate place information declines from the septal to temporal end, hippocampal connectivity to prefrontal and subcortical sites that might relate such place information to behavioral-control processes shows an opposite gradient. We examined in rats the impact of selective lesions to relevant parts of the hippocampus on behavioral tests requiring place learning (watermaze procedures) and on in vivo electrophysiological models of hippocampal encoding (long-term potentiation [LTP], place cells). We found that the intermediate hippocampus is necessary and largely sufficient for behavioral performance based on rapid place learning. In contrast, a residual septal pole of the hippocampus, although displaying intact electrophysiological indices of rapid information encoding (LTP, precise place-related firing, and rapid remapping), failed to sustain watermaze performance based on rapid place learning. These data highlight the important distinction between hippocampal encoding and the behavioral performance based on such encoding, and suggest that the intermediate hippocampus, where substrates of rapid accurate place encoding converge with links to behavioral control, is critical to translate rapid (one-trial) place learning into navigational performance.
Social Media Engagement and HIV Testing Among Men Who Have Sex With Men in China: A Nationwide Cross-Sectional Survey

Background Many interventions find that social media engagement with health promotion materials can translate into behavioral changes. However, only a few studies have examined the ways in which specific actions on various social media platforms are correlated with health behaviors. Objective The objective of this study was to examine the association between social media use and HIV testing behaviors among Chinese men who have sex with men (MSM). Methods In July 2016, a Web-based survey was conducted to recruit MSM in 8 Chinese cities through Blued (Blue City Holdings Ltd.), the world’s largest gay mobile phone app. Data on sociodemographic variables, social media use platforms and behaviors, sexual behaviors, and HIV testing histories were collected. HIV testing–related social media use was defined as having ever engaged with HIV testing content on social media, which was further divided into observing (ie, receiving), endorsing (eg, liking and sharing), and contributing (eg, posting or commenting on HIV testing materials). Confirmatory factor analysis (CFA) was conducted to determine the best division of HIV testing–related social media use. Univariate and multivariable logistic regressions were used to examine the association between HIV testing–related social media use and HIV testing behaviors. Results A total of 2105 individuals participated in the survey. Among them, 46.75% (984) were under the age of 24 years, 35.43% (746) had high school education or less, and 47.74% (587) had condomless sex in the last 3 months. More than half of the respondents (58.14%, 1224/2105) reported HIV testing–related social media use. Additionally, HIV testing–related social media use, especially on multifunctional platforms such as WeChat, was found to be associated with recent HIV testing (adjusted odds ratio [aOR] 2.32, 95% CI 1.66-3.24). Contributing on social media was correlated with recent HIV testing (aOR 2.10, 95% CI 1.40-3.16), but neither observing (aOR 0.66, 95% CI 0.38-1.15) nor endorsing (aOR 1.29, 95% CI 0.88-1.90) were correlated. Conclusions Our data suggest that social media use, particularly on multifunctional platforms such as WeChat and with contributing behaviors, is correlated with HIV testing among MSM in China. Campaigns that promote active participant contribution on social media beyond passive observation and endorsement of promotional materials are needed. This study has implications for the design and implementation of social media interventions to promote HIV testing.