Miracle-dz/UniFAR-FTUs huggingface dataset:
Nonmonotone Spectral Projected Gradient Methods on Convex Sets

Nonmonotone projected gradient techniques are considered for the minimization of differentiable functions on closed convex sets. The classical projected gradient schemes are extended to include a nonmonotone steplength strategy that is based on the Grippo--Lampariello--Lucidi nonmonotone line search. In particular, the nonmonotone strategy is combined with the spectral gradient choice of steplength to accelerate the convergence process. In addition to the classical projected gradient nonlinear path, the feasible spectral projected gradient is used as a search direction to avoid additional trial projections during the one-dimensional search process. Convergence properties and extensive numerical results are presented.
Relation between early introduction of solid food to infants and their weight and illnesses during the first two years of life.

OBJECTIVE--To assess the relations between early introduction of solid food and infant weight, gastrointestinal illness, and allergic illnesses during the first two years of life. DESIGN--Prospective observational study of infants followed up for 24 months after birth. SETTING--Community setting in Dundee. PATIENTS--671 newborn infants, of whom 455 were still available for study at 2 years of age. MAIN OUTCOME MEASURES--Infants' diet, weight, and incidence of gastrointestinal illness, respiratory illness, napkin dermatitis, and eczema at 2 weeks and 2, 3, 4, 6, 9, 12, 15, 18, 21, and 24 months of age. RESULTS--The infants given solid food at an early age (at < 8 weeks or 8-12 weeks) were heavier than those introduced to solids later (after 12 weeks) at 4, 8, 13, and 26 weeks of age (p < 0.01) but not at 52 and 104 weeks. At their first solid feed those given solids early were heavier than infants of similar age who had not yet received solids. The incidence of gastrointestinal illness, wheeze, and nappy dermatitis was not related to early introduction of solids. There was a significant but less than twofold increase in respiratory illness at 14-26 weeks of age and persistent cough at 14-26 and 27-39 weeks of age among the infants given solids early. The incidence of eczema was increased in the infants who received solids at 8-12 weeks of age. CONCLUSION--Early introduction of solid food to infants is less harmful than was previously reported. Longer follow up is needed, but, meanwhile, a more relaxed approach to early feeding with solids should be considered.
Polymerized-Type I Collagen Downregulates Inflammation and Improves Clinical Outcomes in Patients with Symptomatic Knee Osteoarthritis Following Arthroscopic Lavage: A Randomized, Double-Blind, and Placebo-Controlled Clinical Trial

Objectives. Polymerized-type I collagen (polymerized collagen) is a downmodulator of inflammation and cartilage regenerator biodrug. Aim. To evaluate the effect of intraarticular injections of polymerized collagen after arthroscopic lavage on inflammation and clinical improvement in patients with knee osteoarthritis (OA). Methods. Patients (n = 19) were treated with 6 intraarticular injections of 2 mL of polymerized collagen (n = 10) or 2 mL of placebo (n = 9) during 3 months. Followup was 3 months. The primary endpoints included Lequesne index, pain on a visual analogue scale (VAS), WOMAC, analgesic usage, the number of Tregs and proinflammatory/anti-inflammatory cytokine-expressing peripheral cells. Secondary outcomes were Likert score and drug evaluation. Clinical and immunological improvement was determined if the decrease in pain exceeds 20 mm on a VAS, 20% of clinical outcomes, and inflammatory parameters from baseline. Urinary levels of C-terminal crosslinking telopeptide of collagen type II (CTXII) and erythrocyte sedimentation rate (ESR) were determined. Results. Polymerized collagen was safe and well tolerated. Patients had a statistically significant improvement (P < 0.05) from baseline versus polymerized collagen and versus placebo at 6 months on Lequesne index, VAS, ESR, Tregs IL-1β, and IL-10 peripheral-expressing cells. Urinary levels of CTXII were decreased 44% in polymerized collagen versus placebo. No differences were found on incidence of adverse events between groups. Conclusion. Polymerized collagen is safe and effective on downregulation of inflammation in patients with knee OA.
LOCOMOTOR PERFORMANCE OF DROSOPHILA MELANOGASTER: INTERACTIONS AMONG DEVELOPMENTAL AND ADULT TEMPERATURES, AGE, AND GEOGRAPHY

Abstract We explored the extent to which a phenotypic trait (walking speed) of Drosophila melanogaster is influenced by population, developmental temperature, adult temperature, and age. Our goals were to estimate the importance of these factors and to test the beneficial acclimation hypothesis. We measured speed of flies from two populations (the Congo and France) that developed at different temperatures (18, 25, and 29°C) and were tested at different temperatures (18, 25, and 29°C) and ages (2, 7, 13 days). Not surprisingly, speed increased strongly with test temperature. Speed was generally greatest for flies reared at an intermediate developmental temperature, contrary to the beneficial acclimation hypothesis, which predicts that speed would be greatest when influenced by interactions involving population. For example, speed was greatest for flies from France that developed at a low temperature, but for flies from the Congo that developed at a high temperature. The impact of developmental temperature declined with age. Surprisingly, speed actually increased with age for flies raised and maintained at a low temperature, but decreased with age for flies raised and maintained at an intermediate or at a high temperature. Thus, walking performance is highly dynamic phenotypically, complicating potential attempts to predict responses to selection on performance. Corresponding Editor: T. Mousseau
Knowledge Central: A Central Role for Knowledge Attributions in Social Evaluations

Five experiments (N = 1710) demonstrate the central role of knowledge attributions in social evaluations. In Experiments 1–3, we manipulated whether an agent believes, is certain of, or knows a true proposition and asked people to rate whether the agent should perform a variety of actions. We found that knowledge, more so than belief or certainty, leads people to judge that the agent should act. In Experiments 4–5, we investigated whether attributions of knowledge or certainty can explain an important finding on how people act based on statistical evidence, known as “the Wells effect”. We found that knowledge attributions, but not certainty attributions, mediate this effect on decision making.
Modified Technique by De La Cruz and Jean in Pediatric Kidney Transplantation for Ureterovesical Implantation

Introduction: Vasculature and ureterovesical anastomosis are known like the most important surgical aspect of renal transplantation. Underwent, we used the Ricard technique modified by De La Cruz and Jean to diminished those urological complications. The objective of this work is given to know this modified technique and review the outcomes, with more emphasis in vesicoureteral reflux in pediatric patients following kidney transplantation. Patients and methods: Retrospectively during 6 months, we analyzed the outcomes of 16 renal transplant recipients with ureteral implantation underwent the Ricard Technique modified by De La Cruz and Jean. Results: We observed: eritrocitury (hematuria) was 13.3 ± 1.85 in 25% of patient in the first 3 months post operatively and interrupted after removing the double J stent. Mean plasma creatinine level at 2 months of transplanted was 0.85 ± 0.38 mg/dl. Ureteral meatal stenosis (obstruction) was presented in 31.2% patients that manifested like minimum hydronephrosis. Urinary tract infection was observed in 12.5 % of patients. There were no cases of urinary fistula and urinary reflux during 6 months of the outcomes followings. Conclusion: Reflux vesicoureteral is one of the most frequent complications between urinary complications following kidney transplantation. The Ricard modified by De La Cruz and Jean technique has been found to be a quite successful as reimplantation technique in pediatric kidney transplantation to minimize this complication. However, this modified technique is associated with a higher risk of complicated obstruction, what is it, its weakness.
Exercise capacity and mortality among men referred for exercise testing.

BACKGROUND Exercise capacity is known to be an important prognostic factor in patients with cardiovascular disease, but it is uncertain whether it predicts mortality equally well among healthy persons. There is also uncertainty regarding the predictive power of exercise capacity relative to other clinical and exercise-test variables. METHODS We studied a total of 6213 consecutive men referred for treadmill exercise testing for clinical reasons during a mean (+/-SD) of 6.2+/-3.7 years of follow-up. Subjects were classified into two groups: 3679 had an abnormal exercise-test result or a history of cardiovascular disease, or both, and 2534 had a normal exercise-test result and no history of cardiovascular disease. Overall mortality was the end point. RESULTS There were a total of 1256 deaths during the follow-up period, resulting in an average annual mortality of 2.6 percent. Men who died were older than those who survived and had a lower maximal heart rate, lower maximal systolic and diastolic blood pressure, and lower exercise capacity. After adjustment for age, the peak exercise capacity measured in metabolic equivalents (MET) was the strongest predictor of the risk of death among both normal subjects and those with cardiovascular disease. Absolute peak exercise capacity was a stronger predictor of the risk of death than the percentage of the age-predicted value achieved, and there was no interaction between the use or nonuse of beta-blockade and the predictive power of exercise capacity. Each 1-MET increase in exercise capacity conferred a 12 percent improvement in survival. CONCLUSIONS Exercise capacity is a more powerful predictor of mortality among men than other established risk factors for cardiovascular disease.
Cdk11 is a RanGTP-dependent microtubule stabilization factor that regulates spindle assembly rate

Production of Ran–guanosine triphosphate (GTP) around chromosomes induces local nucleation and plus end stabilization of microtubules (MTs). The nuclear protein TPX2 is required for RanGTP-dependent MT nucleation. To find the MT stabilizer, we affinity purify nuclear localization signal (NLS)–containing proteins from Xenopus laevis egg extracts. This NLS protein fraction contains the MT stabilization activity. After further purification, we used mass spectrometry to identify proteins in active fractions, including cyclin-dependent kinase 11 (Cdk11). Cdk11 localizes on spindle poles and MTs in Xenopus culture cells and egg extracts. Recombinant Cdk11 demonstrates RanGTP-dependent MT stabilization activity, whereas a kinase-dead mutant does not. Inactivation of Cdk11 in egg extracts blocks RanGTP-dependent MT stabilization and dramatically decreases the spindle assembly rate. Simultaneous depletion of TPX2 completely inhibits centrosome-dependent spindle assembly. Our results indicate that Cdk11 is responsible for RanGTP-dependent MT stabilization around chromosomes and that this local stabilization is essential for normal rates of spindle assembly and spindle function.
Investigation of Nonlinear Pupil Dynamics by Recurrence Quantification Analysis

Pupil is controlled by the autonomous nervous system (ANS). It shows complex movements and changes of size even in conditions of constant stimulation. The possibility of extracting information on ANS by processing data recorded during a short experiment using a low cost system for pupil investigation is studied. Moreover, the significance of nonlinear information contained in the pupillogram is investigated. We examined 13 healthy subjects in different stationary conditions, considering habitual dental occlusion (HDO) as a weak stimulation of the ANS with respect to the maintenance of the rest position (RP) of the jaw. Images of pupil captured by infrared cameras were processed to estimate position and size on each frame. From such time series, we extracted linear indexes (e.g., average size, average displacement, and spectral parameters) and nonlinear information using recurrence quantification analysis (RQA). Data were classified using multilayer perceptrons and support vector machines trained using different sets of input indexes: the best performance in classification was obtained including nonlinear indexes in the input features. These results indicate that RQA nonlinear indexes provide additional information on pupil dynamics with respect to linear descriptors, allowing the discrimination of even a slight stimulation of the ANS. Their use in the investigation of pathology is suggested.
Automotive embedded systems software reprogramming

The exponential growth of computer power is no longer limited to stand alone computing systems but applies to all areas of commercial embedded computing systems. The ongoing rapid growth in intelligent embedded systems is visible in the commercial automotive area, where a modern car today implements up to 80 different electronic control units (ECUs) and their total memory size has been increased to several hundreds of megabyte. This growth in the commercial mass production world has led to new challenges, even within the automotive industry but also in other business areas where cost pressure is high. The need to drive cost down means that every cent spent on recurring engineering costs needs to be justified. A conflict between functional requirements (functionality, system reliability, production and manufacturing aspects etc.), testing and maintainability aspects is given. Software reprogramming, as a key issue within the automotive industry, solve that given conflict partly in the past. Software Reprogramming for in-field service and maintenance in the after sales markets provides a strong method to fix previously not identified software errors. But the increasing software sizes and therefore the increasing software reprogramming times will reduce the benefits. Especially if ECU’s software size growth faster than vehicle’s onboard infrastructure can be adjusted. The thesis result enables cost prediction of embedded systems’ software reprogramming by generating an effective and reliable model for reprogramming time for different existing and new technologies. This model and additional research results contribute to a timeline for short term, mid term and long term solutions which will solve the currently given problems as well as future challenges, especially for the automotive industry but also for all other business areas where cost pressure is high and software reprogramming is a key issue during products life cycle.
Lipoprotein oxidation: mechanistic aspects, methodological approaches and clinical relevance

The oxidation of LDL is now commonly implicated as an initiator of atherosclerosis and a standard in-vitro LDL ‘oxidizability’ test is required. This review will discuss current problems and advances that have been made in our understanding of the molecular mechanisms of radical-mediated LDL oxidation and antioxidation, how they relate to the in-vitro assessment of the ‘oxidizability’ of LDL and how they may be relevant to in-vivo LDL oxidation. Tocopherol-mediated peroxidation is used as a novel model of LDL lipid oxidation to discuss why terms such as ‘lag time’ are features of the in-vitro oxidation conditions, rather than being inherent to LDL oxidation per se. In addition, we will also cover why it is premature, at present, to use one particular LDL oxidizability test as a standard.
Species-specific binding of CD4 to the beta 2 domain of major histocompatibility complex class II molecules

Exon-shuffled constructs between mouse (IA beta b) and human (DR3 beta) class II beta chains were made to study the interaction sites between CD4 and major histocompatibility complex (MHC) class II molecules, and to determine whether a species barrier is involved. The overall structure and the peptide binding groove appeared to be unaffected by the exon shuffling procedure as determined by monoclonal antibody and peptide binding assays, respectively. While purified CD4+ BALB/c T cells responded strongly in a mixed leukocyte reaction to transfectants expressing the whole IA molecule, the response to IA molecules containing a DR beta 2 domain was substantially reduced. In addition, the presence of an IA beta 2 domain in DR failed to restore the weak xenoreactivity to the whole DR molecule. Similar observations were made with murine HEL-specific, IA alpha k beta b-restricted T cell hybridomas which responded significantly stronger to the whole compared with the exon-shuffled IA molecules. The involvement of CD4 in these differential responses was confirmed by the observation that CD4 loss variants responded to both molecules comparably, and transfection of CD4 into these cells restored the parental phenotype. In contrast, CD4 loss variants transfected with human CD4 responded equally to both the whole and the exon-shuffled molecules. Taken together, these data imply the existence of a partial species barrier, and suggest that CD4 interacts with the beta 2 domain of MHC class II molecules, probably in addition to other contact sites. Models for the interaction of CD4 with MHC class II molecules are presented.
The role of early visual cortex in visual integration: a neural model of recurrent interaction

This paper presents a model on the potential functional roles of the early visual cortex in the primate visual system. Our hypothesis is that early visual areas, such as V1, are important for continual interaction among various higher order visual areas during visual processing. The interaction is mediated by recurrent connections between higher order visual areas and V1, manifested in the long‐latency context‐sensitive activities often observed in neurophysiological experiments, and is responsible for the re‐integration of information analysed by the higher visual areas. Specifically, we considered the case of integrating ‘what’ and ‘where’ information from the ventral and dorsal streams. We found that such a cortical architecture provides simple solutions and fresh insights into the problems of attentional routing and visual search. The computational viability of this architecture was tested by simulating a large‐scale neural dynamical network.
Challenges and Experience in Prototyping a Multi-Modal Stream Analytic and Monitoring Application on System S

In this paper, we describe the challenges of prototyping a reference application on System S, a distributed stream processing middleware under development at IBM Research. With a large number of stream PEs (Processing Elements) implementing various stream analytic algorithms, running on a large-scale, distributed cluster of nodes, and collaboratively digesting several multi-modal source streams with vastly differing rates, prototyping a reference application on System S faces many challenges. Specifically, we focus on our experience in prototyping DAC (Disaster Assistance Claim monitoring), a reference application dealing with multi-modal stream analytic and monitoring. We describe three critical challenges: (1) How do we generate correlated, multi-modal source streams for DAC? (2) How do we design and implement a comprehensive stream application, like DAC, from many divergent stream analytic PEs? (3) How do we deploy DAC in light of source streams with extremely different rates? We report our experience in addressing these challenges, including modeling a disaster claim processing center to generate correlated source streams, constructing the PE flow graph, utilizing programming supports from System S, adopting parallelism, and exploiting resource-adaptive computation.
Human Aortic Valve Calcification Is Associated With an Osteoblast Phenotype

Background—Calcific aortic stenosis is the third most common cardiovascular disease in the United States. We hypothesized that the mechanism for aortic valve calcification is similar to skeletal bone formation and that this process is mediated by an osteoblast-like phenotype. Methods and Results—To test this hypothesis, we examined calcified human aortic valves replaced at surgery (n=22) and normal human valves (n=20) removed at time of cardiac transplantation. Contact microradiography and micro-computerized tomography were used to assess the 2-dimensional and 3-dimensional extent of mineralization. Mineralization borders were identified with von Kossa and Goldner’s stains. Electron microscopy and energy-dispersive spectroscopy were performed for identification of bone ultrastructure and CaPO4 composition. To analyze for the osteoblast and bone markers, reverse transcriptase–polymerase chain reaction was performed on calcified versus normal human valves for osteopontin, bone sialoprotein, osteocalcin, alkaline phosphatase, and the osteoblast-specific transcription factor Cbfa1. Microradiography and micro-computerized tomography confirmed the presence of calcification in the valve. Special stains for hydroxyapatite and CaPO4 were positive in calcification margins. Electron microscopy identified mineralization, whereas energy-dispersive spectroscopy confirmed the presence of elemental CaPO4. Reverse transcriptase–polymerase chain reaction revealed increased mRNA levels of osteopontin, bone sialoprotein, osteocalcin, and Cbfa1 in the calcified valves. There was no change in alkaline phosphatase mRNA level but an increase in the protein expression in the diseased valves. Conclusions—These findings support the concept that aortic valve calcification is not a random degenerative process but an active regulated process associated with an osteoblast-like phenotype.
Normal values of M mode echocardiographic measurements of more than 2000 healthy infants and children in central Europe

OBJECTIVE To obtain normal M mode (one dimensional) echocardiographic values in a substantial sample of normal infants and children. DESIGN Data were obtained over three years from a single centre in central Europe. PATIENTS 2036 healthy infants and children aged one day to 18 years. METHODS In line with recommendations for standardising measurements from M mode echocardiograms, and using digital echocardiographic equipment, measurements were obtained of the following: right ventricular anterior wall thickness at end diastole, right ventricular end diastolic dimension, thickness of interventricular septum at end diastole and end systole, thickness of posterior wall of the left ventricle at end diastole and end systole, left ventricular dimension at end diastole and end systole, pulmonary and aortic valve diameter, and left atrial dimension. RESULTS Measurements are presented graphically on centile charts with respect to body surface area, and as tables with mean and 2 SD values for newborns in relation to body weight, and for infants and children in relation to body surface area. Best fitting regression equations are given for each measured variable, using the 50th centile values. CONCLUSION In comparison with previously published normal values, the presented charts and tables make it possible to judge echocardiographic measurements of a particular patient as normal or abnormal.
The use of nonnegative garrote for order selection of ARX models

Order selection of linear regression models has been thoroughly researched in the statistical community for some time. Different shrinkage methods have been proposed, such as the Ridge and Lasso regression methods. Especially the Lasso regression has won fame because of its ability to set less important parameters exactly to zero. However, these methods do not take dynamical systems into account, where the regressors are ordered via the time lag. To this end, a modified variant of the nonnegative garrote method will be analyzed.