Miracle-dz/UniFAR-FTUs huggingface dataset:
Ligninolytic enzymes production and Remazol brilliant blue R decolorization by tropical brazilian basidiomycetes fungi

Remazol Brilliant Blue R (RBBR) dye was used as substrate to evaluate ligninolytic activity in 125 basidiomycetous fungi isolated from tropical ecosystems. The extracellular RBBR decolorizing activity produced when selected fungi were grown in solid media and in soil contaminated with organochlorines was also evaluated. A total of 106 fungi decolorized the RBBR during the growth in malt extract agar (MEA, 2%); 96 fungi showed a mycelia growth and decolorization activity stronger than the P. chrysosporium used as reference. Extracellular extracts of 35 selected fungi grown on solid medium with sugar cane bagasse (BGS) were evaluated for RBBR decolorization and peroxidase activity. All fungi showed peroxidase activities, but 5 of those were unable to decolorize the RBBR. Different patterns of ligninolytic enzymes were detected in 12 fungi extracts. Mn-dependent peroxidase (MnP) was produced by Peniophora cinerea, Psilocybe castanella, three strains of Trametes villosa, T. versicolor, Melanoporia nigra and Trichaptum byssogenum. All 12 fungi had laccase activity. Trogia buccinalis showed the highest RBBR decolorization and did not produce MnP activity. RBBR decolorization without MnP production was also observed for three strains of Lentinum tested. Higher levels of peroxidase and laccase cannot be related to high RBBR decolorization. RBBR decolorization by extracellular extract was also detected during the growth of P. castanella, L. crinitus, P. cinerea and two strains of T. Villosa in pentachlorophenol- and hexachlorobenzene-contaminated soils. These fungi showed higher RBBR decolorization when grown in the presence of organochlorine compounds than when in non contaminated soil.
CoreEAF - a Model Driven Approach to Information Systems

Model driven IT systems development with code generation is today used in several, mostly technical, application areas. However, for large IT based Information Systems (ITbIS) it is still quite uncommon. An innovative case of low cost and high quality ITbIS is presented along with the model driven framework applied. This innovation is made possible by a coherent model driven approach with integrated method and tool support for the complete development and maintenance cycles of an ITbIS. For over 20 years and still, the FMV ERP system has been designed, extended and modified in pace with changes in the organization as well as disruptive changes in information technology.
Non-commercial Research and Educational Use including without Limitation Use in Instruction at Your Institution, Sending It to Specific Colleagues That You Know, and Providing a Copy to Your Institution's Administrator. All Other Uses, Reproduction and Distribution, including without Limitation Comm

Fault tolerant Grid computing is of vital importance as the Grid and Mobile computing worlds converge to the Mobile Grid computing paradigm. We present an efficient scheme based on task replication, which utilizes the Weibull reliability function for the Grid resources so as to estimate the number of replicas that are going to be scheduled in order to guarantee a specific fault tolerance level for the Grid environment. The additional workload that is produced by the replication is handled by a resource management scheme which is based on the knapsack formulation and which aims to maximize the utilization and profit of the Grid infrastructure. The proposed model has been evaluated through simulation and has shown its efficiency for being used in a middleware approach in future mobile Grid environments.
Differential Long-Term Effects of Haloperidol and Risperidone on the Acquisition and Performance of Tasks of Spatial Working and Short-Term Memory and Sustained Attention in Rats

A common feature of the neuropsychiatric disorders for which antipsychotic drugs are prescribed is cognitive dysfunction, yet the effects of long-term antipsychotic treatment on cognition are largely unknown. In the current study, we evaluated the effects of long-term oral treatment with the first-generation antipsychotic haloperidol (1.0 and 2.0 mg/kg daily) and the second-generation antipsychotic risperidone (1.25 and 2.5 mg/kg daily) on the acquisition and performance of two radial-arm maze (RAM) tasks and a five-choice serial reaction-time task (5C-SRTT) in rats during days 15–60 and 84–320 days of treatment, respectively. In the RAM, neither antipsychotic significantly affected the acquisition or performance of a spatial win shift or a delayed non–match-to-position task. Conversely, in the rats administered 5C-SRTT, haloperidol was associated with profound deficits in performance, and the subjects were not able to progress through all stages of task acquisition. Depending on the dose, risperidone was associated with a greater number of trials to meet specific performance criteria during task acquisition compared with vehicle-treated controls; however, most subjects were eventually able to achieve all levels of task acquisition. Both haloperidol and risperidone also increased the number of perseverative and time-out responses during certain stages of task acquisition, and the response and reward latencies were slightly higher than controls during several stages of the study. These results in rats suggest that while long-term treatment with haloperidol or risperidone may not significantly affect spatial working or short-term memory, both antipsychotics can (depending on dose) impair sustained attention, decrease psychomotor speed, increase compulsive-type behaviors, and impair cognitive flexibility.
The Decreasing Returns of Serial Acquirers around the World

We study 18,359 acquisitions made by serial acquirers around the world and uncover significantly lower announcement-day returns in later acquisitions. We find that the decreasing announcement returns in later acquisitions is mitigated when serial acquirers are domiciled in better governed countries or have a higher fraction of institutional holdings by investors from better governed countries. To disentangle a potential agency-based explanation from others for the acquisitive pattern, we utilize a unique database of private firms and subsidiaries to examine the post-acquisition operating performance of the targets. Profitability, sales growth, and investment improves but at a slower rate for the target firms in later acquisitions by serial acquirers. Overall, we interpret our evidence as consistent with agency cost explanations for serial acquisition behavior.
Efficacy of Novel Rifamycin Derivatives against Rifamycin-Sensitive and -Resistant Staphylococcus aureus Isolates in Murine Models of Infection

ABSTRACT Novel rifamycins (new chemical entities [NCEs]) having MICs of 0.002 to 0.03 μg/ml against Staphylococcus aureus and retaining some activity against rifampin-resistant mutants were tested for in vivo efficacy against susceptible and rifampin-resistant strains of S. aureus. Rifalazil and rifampin had a 50% effective dose (ED50) of 0.06 mg/kg of body weight when administered as a single intravenous (i.v.) dose in a murine septicemia model against a susceptible strain of S. aureus. The majority of NCEs showed efficacy at a lower i.v. dose (0.003 to 0.06 mg/kg). In addition, half of the NCEs tested for oral efficacy had ED50s in the range of 0.015 to 0.13 mg/kg, i.e., lower or equivalent to the oral ED50s of rifampin and rifalazil. NCEs were also tested in the septicemia model against a rifampin-resistant strain of S. aureus. Twenty-four of 169 NCEs were efficacious when administered as a single oral dose of 80 mg/kg. These NCEs were examined in the murine thigh infection model against a susceptible strain of S. aureus. Several NCEs dosed by intraperitoneal injection at 0.06 mg/kg caused a significant difference in bacterial titer compared with placebo-treated animals. No NCEs showed efficacy in the thigh model against a highly rifampin-resistant strain. However, several NCEs showed an effect when tested against a partially rifampin-resistant strain. The NCEs having a 25-hydroxyl moiety were more effective as a group than their 25-O-acetyl counterparts. These model systems defined candidate NCEs as components of potential combination therapies to treat systemic infections or as monotherapeutic agents for topical applications.
Young people’s perceptions and experiences of their physical bodies

Research has consistently revealed gender differences in physical self-concept and engagement in physical activity, with results typically favouring boys. Despite strong evidence to suggest that socialisation results in physical activity taking on different meanings and experiences for girls and boys, these different meanings have rarely been considered in interventions targeting youth physical inactivity. Studies of self-objectification have shown that - women, particularly adolescent girls, experience the negative impact of self-objectification (e.g., disordered eating, depression and decreased body satisfaction) more than males, although males are increasingly being subject to sexual objectification in society. Developmental differences in measures of physical self-concept have been less clear than gendered differences but have major implications for when interventions targeting physical inactivity and body image should be initiated.
Molecular characterization of an autoantigen of PM-Scl in the polymyositis/scleroderma overlap syndrome: a unique and complete human cDNA encoding an apparent 75-kD acidic protein of the nucleolar complex

About 50% of patients with the polymyositis/scleroderma (PM-Scl) overlap syndrome are reported to have autoantibodies to a nuclear/nucleolar particle termed PM-Scl. The particle is composed of several polypeptides of which two have been identified as autoantigens. In this report, human cDNA clone coding for the entire 75-kD autoantigen of the PM-Scl particle (PM-Scl 75) was isolated from a MOLT- 4 lambda gt-11 library. The deduced amino acid sequence of the cDNA clone represented a protein of 355 amino acids and 39.2 kD; the in vitro translation product of this cDNA migrated in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) at approximately 70 kD. The aberrant migration of the polypeptide in SDS-PAGE was shown to be related to the COOH half that was rich in acidic residues. Authenticity of the cDNA coding for PM-Scl 75 was shown by immunoreactivity of PM-Scl sera with in vitro translation products and recombinant fusion proteins encoded by the cDNA. In addition, rabbit antibodies raised to recombinant fusion protein reacted in immunofluorescence, immunoblotting, and immunoprecipitation with the characteristic features displayed by human anti-PM-Scl sera.
Retinal function in birdshot retinochoroidopathy

Abstract The electroretinograms (ERGs) of 15 patients with birdshot retinochoroidopathy varied from supernormal to non‐recordable, depending upon the severity and the stage of the disease. The abnormal ERGs were characterized by a disproportionate decrease of the b‐wave amplitude compared with the a‐wave amplitude, demonstrating the negative (‐) type response. This distinct ERG pattern has not been observed in any other type of uveitis or chorioretinitis, and appears specific to birdshot retinochoroidopathy. ERG findings indicate that in birdshot retinochoroidopathy the neural layers of the retina are more diffusely and severely involved than the receptor‐retinal pigment epithelium‐choroid complex. In the most advanced stage, the patients becomes night blind with a non‐recordable ERG, a situation that is essentially the same as retinitis pigmentosa, except that pigmentation is conspicuously absent in the fundus.
A Host Small GTP-binding Protein ARL8 Plays Crucial Roles in Tobamovirus RNA Replication

Tomato mosaic virus (ToMV), like other eukaryotic positive-strand RNA viruses, replicates its genomic RNA in replication complexes formed on intracellular membranes. Previous studies showed that a host seven-pass transmembrane protein TOM1 is necessary for efficient ToMV multiplication. Here, we show that a small GTP-binding protein ARL8, along with TOM1, is co-purified with a FLAG epitope-tagged ToMV 180K replication protein from solubilized membranes of ToMV-infected tobacco (Nicotiana tabacum) cells. When solubilized membranes of ToMV-infected tobacco cells that expressed FLAG-tagged ARL8 were subjected to immunopurification with anti-FLAG antibody, ToMV 130K and 180K replication proteins and TOM1 were co-purified and the purified fraction showed RNA-dependent RNA polymerase activity that transcribed ToMV RNA. From uninfected cells, TOM1 co-purified with FLAG-tagged ARL8 less efficiently, suggesting that a complex containing ToMV replication proteins, TOM1, and ARL8 are formed on membranes in infected cells. In Arabidopsis thaliana, ARL8 consists of four family members. Simultaneous mutations in two specific ARL8 genes completely inhibited tobamovirus multiplication. In an in vitro ToMV RNA translation-replication system, the lack of either TOM1 or ARL8 proteins inhibited the production of replicative-form RNA, indicating that TOM1 and ARL8 are required for efficient negative-strand RNA synthesis. When ToMV 130K protein was co-expressed with TOM1 and ARL8 in yeast, RNA 5′-capping activity was detected in the membrane fraction. This activity was undetectable or very weak when the 130K protein was expressed alone or with either TOM1 or ARL8. Taken together, these results suggest that TOM1 and ARL8 are components of ToMV RNA replication complexes and play crucial roles in a process toward activation of the replication proteins' RNA synthesizing and capping functions.
Gelatinase-stimuli strategy enhances the tumor delivery and therapeutic efficacy of docetaxel-loaded poly(ethylene glycol)-poly(ɛ-caprolactone) nanoparticles

Nanoscale drug carriers have been extensively developed to improve drug therapeutic efficiency. However, delivery of chemotherapeutic agents to tumor tissues and cells has not been favorably managed. In this study, we developed a novel “intelligent” nanoparticle, consisting of a gelatinase-cleavage peptide with poly(ethylene glycol) (PEG) and poly(ɛ-caprolactone) (PCL)-based structure for tumor-targeted docetaxel delivery (DOC-TNPs). The docetaxel-loaded PEG-PCL nanoparticles (DOC-NPs) that did not display gelatinase-stimuli behaviors were used as a control. We found clear evidence that the DOC-TNPs were transformed by gelatinases, allowing drug release and enhancing the cellular uptake of DOC (P < 0.01). In vivo biodistribution study demonstrated that targeted DOC-TNPs could accumulate and remain in the tumor regions, whereas non-targeted DOC-NPs rapidly eliminated from the tumor tissues. DOC-TNPs exhibited higher tumor growth suppression than commercialized Taxotere® (docetaxel; Jiangsu Hengrui Medicine Company, Jiangsu, China) and DOC-NPs on hepatic H22 tumor model via intravenous administration (P < 0.01). Both in vitro and in vivo experiments suggest that the gelatinase-mediated nanoscale delivery system is promising for improvement of antitumor efficacy in various overexpressed gelatinase cancers.
Optimized Collection Protocol for Plasma MicroRNA Measurement in Patients with Cardiovascular Disease

Background. Various microRNAs (miRNAs) are used as markers of acute coronary syndrome, in which heparinization is considered mandatory therapy. Nevertheless, a standard method of handling plasma samples has not been proposed, and the effects of heparin treatment on miRNA detection are rarely discussed. Materials and Method. This study used quantitative polymerase chain reaction (qPCR) analysis to investigate how storage temperature, standby time, hemolysis, and heparin treatment affect miRNA measurement in plasma samples from 25 patients undergoing cardiac catheterization. Results. For most miRNAs, the qPCR results remained consistent during the first 2 hours. The miRNA signals did not significantly differ between samples stored at 4°C before processing and samples stored at room temperature (RT) before processing. miR-451a/miR-23a ratio < 60 indicated < 0.12% hemolysis with 100% sensitivity and 100% specificity. Pretreatment with 0.25 U heparinase I recovered qPCR signals that were reduced by in vivo heparinization. Conclusions. For miRNA measurement, blood samples stored at RT should be processed into plasma within 2 hours after withdrawal and should be pretreated with 0.25 U heparinase I to overcome heparin-attenuated miRNA signals. The miR-451a/miR-23a ratio is a reliable indicator of significant hemolysis.
Overcoming Perceptual Features in Logical Reasoning: A Parametric Functional Magnetic Resonance Imaging Study

Participants experience difficulty detecting that an item depicting an H-in-a-square confirms the logical rule, If there is not a T then there is not a circle. Indeed, there is a perceptual conflict between the items mentioned in the rule (T and circle) and in the test item (H and square). Much evidence supports the claim that correct responding depends on detecting and resolving such conflicts. One aim of this study is to find more precise neurological evidence in support of this claim by using a parametric event-related functional magnetic resonance imaging (fMRI) paradigm. We scanned 20 participants while they were required to judge whether or not a conditional rule was verified (or falsified) by a corresponding target item. We found that the right middorsolateral prefrontal cortex (mid-DLPFC) was specifically engaged, together with the medial frontal (anterior cingulate and presupplementary motor area [pre-SMA]) and parietal cortices, when mismatching was present. Activity in these regions was also linearly correlated with the level of mismatch between the rule and the test item. Furthermore, a psychophysiological interaction analysis revealed that activation of the mid-DLPFC, which increases as mismatching does, was accompanied by a decrease in functional integration with the bilateral primary visual cortex and an increase in functional integration with the right parietal cortex. This indicates a need to break away from perceptual cues in order to select an appropriate logical response. These findings strongly indicate that the regions involved in inhibitory control (including the right mid-DLPFC and the medial frontal cortex) are engaged when participants have to overcome perceptual mismatches in order to provide a logical response. These findings are also consistent with neuroimaging studies investigating the belief bias, where prior beliefs similarly interfere with logical reasoning.
Garlic prevents hypoxic pulmonary hypertension in rats

Fallon, Michael B. , Gary A. Abrams, Tarek T. AbdelRazek, Jun Dai, Shi-Juan Chen, Yiu-Fai Chen, Bao Luo, Suzanne Oparil, and David D. Ku. Garlic prevents hypoxic pulmonary hypertension in rats. Am. J. Physiol. 275 (Lung Cell. Mol. Physiol. 19): L283–L287, 1998. —Hypoxic pulmonary vasoconstriction underlies the development of highaltitude pulmonary edema. Anecdotal observations suggest a beneficial effect of garlic in preventing high-altitude symptoms. To determine whether garlic influences pulmonary vasoconstriction, we assessed the effect of garlic on pulmonary pressures in rats subjected to alveolar hypoxia and on vasoconstriction in isolated pulmonary arterial rings. Garlic gavage (100 mg/kg body wt) for 5 days resulted in complete inhibition of acute hypoxic pulmonary vasoconstriction compared with the control group. No difference in mean arterial pressure or heart rate response to hypoxia was seen between the groups. Garlic solution resulted in a significant dosedependent vasorelaxation in both endothelium-intact and mechanically endothelium-disrupted pulmonary arterial rings. The administration of NG-nitro-L-arginine methyl ester (a nitric oxide synthase inhibitor) inhibited the vasodilatory effect of garlic by 80%. These studies document that garlic blocks hypoxic pulmonary hypertension in vivo and demonstrate a combination of endothelium-dependent and -independent mechanisms for the effect in pulmonary arterial rings.
Asthma in children with sickle cell disease and its association with acute chest syndrome

Background: Pulmonary complications are a major cause of morbidity and mortality in sickle cell disease (SCD). The relationship of asthma with SCD and acute chest syndrome (ACS) remains uncertain. A study was undertaken to test the hypotheses that asthma and bronchial hyperreactivity (BHR) are more common in children with SCD than in ethnic matched controls and that SCD children with atopic asthma are more likely to have recurrent episodes of ACS. Methods: A modified International Study of Asthma and Allergies in Childhood (ISAAC) questionnaire was administered and skin prick tests undertaken in 80 children with SCD and 80 ethnic matched controls aged 5–10 years. BHR was assessed by measurement of forced expiratory volume in 1 second before and after a bronchodilator (albuterol 200 μg) or an exercise challenge. Results: Asthma (48% v 22%, p = 0.002) and BHR (p = 0.02) but not atopy were more common in children with SCD than in controls. Atopy (66.6% v 29%, p = 0.007) and asthma (80% v 40%, p = 0.005), particularly atopic asthma (53% v 12%, p<0.001), were more common in children with SCD who had suffered recurrent episodes of ACS than in those who had suffered a single or no episode. Conclusions: Asthma and BHR are more common in children with SCD than in ethnic matched controls, and atopic asthma appears to be associated with recurrent ACS. Early and effective anti-asthma therapy might reduce the pulmonary morbidity associated with SCD.
Choosing Where to Attend and the Medial Frontal Cortex: An fMRI Study

To investigate how we orient our spatial attention, previous studies have recorded neural activity while participants are instructed where to attend. Here we contrast this classical instructed attention condition with a novel condition in which the focus of voluntary attention is not specified by the experimenter but rather is freely chosen by the participant. Central cues prompted fixating participants either to choose which of two peripheral spatial locations to covertly attend or formed an instruction. Either type of cueing initiated selective attention demonstrated behaviorally by enhanced performance at a visual detection task in comparison to a separate divided attention condition. We used functional magnetic resonance imaging to measure which areas were more active during choice than instruction. Choosing where to attend activated a large cluster of medial frontal cortical regions similar to those that have been previously implicated in the free selection of overt action. We then addressed a potential confound in contrasting choice with instruction: participants may remember their behavior more when choosing. In a separate block, and interleaved with choice trials, “memory” trials were introduced in which participants were instructed to remember where they had attended on the previous trial. The presupplementary eye fields and lateral frontal eye fields were specialized for choice-guided attentional orienting over and above any memory confound. This evidence suggests a common mechanism may underlie free selection, whether for covert attention or overt saccades.