GitHub repository: GerkeLab/curatedProstateData

Issues:
issue_44: state: open
title: 02-13-2020 to do list 
user: jhcreed
issue_43: state: open
title: Data types for collection
user: gadenbuie
labels: Process :clapper:: Relates to coordinating process
issue_42: state: open
title: Data - Unable to Locate
user: gadenbuie
labels: Process :clapper:: Relates to coordinating process
Data: Proposed :hatching_chick:: Proposed Data Set
issue_41: state: open
title: Data - Additional Datasets for Consideration
user: gadenbuie
labels: Process :clapper:: Relates to coordinating process
Data: Proposed :hatching_chick:: Proposed Data Set
issue_40: state: open
title: Data - Kamoun et al.
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
Other Source: Data set from other source (PubMed, other)
issue_39: state: open
title: Data - Liu et al. 2006
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
Other Source: Data set from other source (PubMed, other)
issue_38: state: open
title: Data - PRAD MICH, Nature 2012
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
cBioportal: Data set from cBioPortal
issue_37: state: open
title: Data - PRAD FHCRC, Nat Med 2016
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
cBioportal: Data set from cBioPortal
issue_36: state: open
title: Data - PRAD Broad, Nat Gen 2012
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
cBioportal: Data set from cBioPortal
issue_35: state: open
title: Data - PRAD Broad, Cell 2013
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
cBioportal: Data set from cBioPortal
issue_34: state: open
title: Data - SU2C/PCF Dream Team, Cell 2015
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
cBioportal: Data set from cBioPortal
issue_33: state: open
title: Data - TCGA, Cell 2015
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
cBioportal: Data set from cBioPortal
issue_32: state: open
title: Data - GSE62116 - GenomeDx
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
GEO: Data set from GEO
issue_31: state: open
title: Data - GSE51066 - Ross et al. 2016
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
GEO: Data set from GEO
issue_30: state: open
title: Data - GSE26367
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_29: state: open
title: Data - GSE70770 - Ross-Adams et al. 2015
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_28: state: open
title: Data - GSE40272 - Gulzar, Mckenney, Brooks 2012
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
GEO: Data set from GEO
issue_27: state: open
title: Data - GSE62872 - Penney 2014
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
GEO: Data set from GEO
issue_26: state: open
title: Data - GSE79021 - Sinnott 2017
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_25: state: open
title: Data - Liu P, Moreno CS 2006
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
Other Source: Data set from other source (PubMed, other)
issue_24: state: open
title: Data - GSE2109 - expO, IGC 2005
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_23: state: open
title: Data - GSE25136 - Sun, Goodison 2009
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_22: state: open
title: Data - GSE21032 - Taylor, Gerald 2010
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_21: state: open
title: Data - GSE16560 - Sboner, Andr_n 2010
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_20: state: open
title: Data - GSE14206 - GSE14206
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_19: state: open
title: Data - GSE10645 - Nakagawa, Jenkins 2008
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_18: state: open
title: Data - GSE9347 - Arencibia, Bonnin 2009
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_17: state: open
title: Data - GSE8511 - Poisson, Chinnaiyan 2011
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_16: state: open
title: Data - GSE7949 - GSE7949
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_15: state: open
title: Data - GSE7055 - Prueitt, Ambs 2008
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_14: state: open
title: Data - GSE6956 - Wallace, Ambs 2008
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_13: state: open
title: Data - GSE6919 - GSE6919
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_12: state: open
title: Data - GSE6606 - GSE6606
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_11: state: open
title: Data - GSE5377 - Stoss, Albers 2008
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_10: state: open
title: Data - GSE3325 - Varambally, Chinnaiyan 2005
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_9: state: open
title: Data - GSE5132 - True, Nelson 2006
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_8: state: open
title: Data - GSE6099 - Tomlins, Chinnaiyan 2007
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_7: state: open
title: Data - GSE6811 - Tamura, Nakagawa 2007
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_6: state: open
title: Data - GSE8402 - Setlur, Rubin 2008
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_5: state: open
title: Data - GSE3933 - Lapointe, Pollack 2004
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_4: state: open
title: Data - GSE2443 - Best, Chuaqui 2005
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_3: state: open
title: Data - GSE18655 - Barwick, Abramovitz 2010
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_2: state: open
title: Data - GSE6752 - Chandran, Monzon 2007
user: gadenbuie
labels: Data: Proposed :hatching_chick:: Proposed Data Set
Needs Metadata Review :clipboard:: Metadata may be incomplete and needs review
GEO: Data set from GEO
issue_1: state: open
title: Standardize required dataset metadata
user: gadenbuie
labels: Process :clapper:: Relates to coordinating process