Repository: OSInside/kiwi

Issue:
/usr/sbin/grub2-install is missing the correct SELinux label
Even with kiwi v10.2.5, the system isn't fully labelled: `system_u:object_r:unlabeled_t:s0 ./usr/sbin/grub2-install` remains.

Either `setfiles` needs to run after the `grub2-install` -> `grub2-install.orig` and back dance or the cp/mv invocations need to be SELinux aware, i.e. `cp --preserve=context`.

Discussion:
@schaefi: Thanks good catch, will fix it

Solution patch:
diff --git a/doc/source/image_description/elements.rst b/doc/source/image_description/elements.rst
index b084793b..d8a87049 100644
--- a/doc/source/image_description/elements.rst
+++ b/doc/source/image_description/elements.rst
@@ -1729,7 +1729,7 @@ is installed using the `tar` program. Thus the file name is
 expected to be a tar archive. The compression of the archive is
 detected automatically by the tar program. The optional target_dir
 attribute can be used to specify a target directory to unpack the
-archive.
+archive inside the image root tree.
 
 <packages><ignore>
 ~~~~~~~~~~~~~~~~~~
diff --git a/kiwi/bootloader/config/grub2.py b/kiwi/bootloader/config/grub2.py
index 51f2da3c..c81c0461 100644
--- a/kiwi/bootloader/config/grub2.py
+++ b/kiwi/bootloader/config/grub2.py
@@ -610,7 +610,7 @@ class BootLoaderConfigGrub2(BootLoaderConfigBase):
                     config_file, grub_config_file_for_efi_boot
                 )
             )
-            shutil.copy(
+            shutil.copy2(
                 config_file, grub_config_file_for_efi_boot
             )
 
@@ -685,10 +685,10 @@ class BootLoaderConfigGrub2(BootLoaderConfigBase):
         if target_type and os.path.exists(zipl2grub_config_file):
             if os.path.exists(zipl2grub_config_file_orig):
                 # reset the original template file first
-                shutil.copy(zipl2grub_config_file_orig, zipl2grub_config_file)
+                shutil.copy2(zipl2grub_config_file_orig, zipl2grub_config_file)
             else:
                 # no copy of the original template, create it
-                shutil.copy(zipl2grub_config_file, zipl2grub_config_file_orig)
+                shutil.copy2(zipl2grub_config_file, zipl2grub_config_file_orig)
             with open(zipl2grub_config_file) as zipl_config_file:
                 zipl_config = zipl_config_file.read()
                 zipl_config = re.sub(
@@ -1069,7 +1069,7 @@ class BootLoaderConfigGrub2(BootLoaderConfigBase):
             log.debug(
                 f'Copy earlyboot to media path: {early_boot_script_on_media}'
             )
-            shutil.copy(
+            shutil.copy2(
                 early_boot_script, early_boot_script_on_media
             )
         mkimage_call = Command.run(
@@ -1099,7 +1099,7 @@ class BootLoaderConfigGrub2(BootLoaderConfigBase):
                 f'Copy grub image to media path: {efi_image_media_file}'
             )
             Path.create(os.path.dirname(efi_image_media_file))
-            shutil.copy(efi_image_root_file, efi_image_media_file)
+            shutil.copy2(efi_image_root_file, efi_image_media_file)
 
     def _create_efi_config_search(self, uuid=None, mbrid=None):
         efi_boot_config = self.efi_boot_path + '/grub.cfg'
@@ -1130,7 +1130,7 @@ class BootLoaderConfigGrub2(BootLoaderConfigBase):
             Path.create(
                 os.path.dirname(early_boot_script_on_media)
             )
-            shutil.copy(
+            shutil.copy2(
                 early_boot_script, early_boot_script_on_media
             )
         mkimage_call = Command.run(
@@ -1166,7 +1166,7 @@ class BootLoaderConfigGrub2(BootLoaderConfigBase):
                 f'Copy grub image to media path: {bios_image_media_file}'
             )
             Path.create(os.path.dirname(bios_image_media_file))
-            shutil.copy(bios_image_root_file, bios_image_media_file)
+            shutil.copy2(bios_image_root_file, bios_image_media_file)
 
     def _create_early_boot_script_for_uuid_search(self, filename, uuid):
         with open(filename, 'w') as early_boot:
diff --git a/kiwi/bootloader/install/grub2.py b/kiwi/bootloader/install/grub2.py
index e1701576..ac18c888 100644
--- a/kiwi/bootloader/install/grub2.py
+++ b/kiwi/bootloader/install/grub2.py
@@ -18,6 +18,7 @@
 import glob
 import os
 import re
+import shutil
 import logging
 from contextlib import ExitStack
 
@@ -400,17 +401,13 @@ class BootLoaderInstallGrub2(BootLoaderInstallBase):
                 [grub2_install, '.orig']
             )
             grub2_install_noop = '/bin/true'
-            Command.run(
-                [
-                    'chroot', root_path,
-                    'cp', '-p', grub2_install, grub2_install_backup
-                ]
+            shutil.copy2(
+                os.path.normpath(f'{root_path}/{grub2_install}'),
+                os.path.normpath(f'{root_path}/{grub2_install_backup}')
             )
-            Command.run(
-                [
-                    'chroot', root_path,
-                    'cp', grub2_install_noop, grub2_install
-                ]
+            shutil.copy2(
+                os.path.normpath(f'{root_path}/{grub2_install_noop}'),
+                os.path.normpath(f'{root_path}/{grub2_install}')
             )
 
     def _enable_grub2_install(self, root_path):
diff --git a/kiwi/system/setup.py b/kiwi/system/setup.py
index 7d6f6c17..76486cd7 100644
--- a/kiwi/system/setup.py
+++ b/kiwi/system/setup.py
@@ -284,7 +284,8 @@ class SystemSetup:
         overlay_archive = self.description_dir + '/root.tar.gz'
         if os.path.exists(overlay_directory):
             self._sync_overlay_files(
-                overlay_directory, follow_links, preserve_owner_group
+                f'{os.path.normpath(overlay_directory)}/',
+                follow_links, preserve_owner_group
             )
         elif os.path.exists(overlay_archive):
             log.info('Extracting user defined files from archive to image tree')


Test patch:
diff --git a/test/data/example_config_target_dir.xml b/test/data/example_config_target_dir.xml
index f90e5bcd..5e6d6ad7 100644
--- a/test/data/example_config_target_dir.xml
+++ b/test/data/example_config_target_dir.xml
@@ -214,6 +214,7 @@
         <namedCollection name="bootstrap-collection"/>
         <product name="kiwi"/>
         <archive name="bootstrap.tgz" target_dir="foo"/>
+        <archive name="some.tgz" target_dir="/etc"/>
     </packages>
     <packages type="delete">
         <package name="kernel-debug"/>
diff --git a/test/unit/bootloader/config/grub2_test.py b/test/unit/bootloader/config/grub2_test.py
index 6df953f6..486ab526 100644
--- a/test/unit/bootloader/config/grub2_test.py
+++ b/test/unit/bootloader/config/grub2_test.py
@@ -173,9 +173,9 @@ class TestBootLoaderConfigGrub2:
     @patch('kiwi.bootloader.config.grub2.DataSync')
     @patch('kiwi.bootloader.config.grub2.Path.which')
     @patch('os.path.exists')
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     def test_setup_install_boot_images_raises_no_efigrub(
-        self, mock_shutil_copy, mock_exists, mock_Path_which,
+        self, mock_shutil_copy2, mock_exists, mock_Path_which,
         mock_sync, mock_command, mock_grub, mock_shim
     ):
         Defaults.set_platform_name('x86_64')
@@ -349,14 +349,14 @@ class TestBootLoaderConfigGrub2:
         ]
 
     @patch('glob.iglob')
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     @patch('kiwi.bootloader.config.grub2.Path.create')
     @patch('kiwi.bootloader.config.grub2.Command.run')
     @patch('kiwi.bootloader.config.grub2.Defaults.get_signed_grub_loader')
     @patch('kiwi.bootloader.config.grub2.Path.which')
     def test_copy_grub_config_to_efi_path(
         self, mock_Path_which, mock_get_signed_grub_loader, mock_Command,
-        mock_Path_create, mock_shutil_copy, mock_glob
+        mock_Path_create, mock_shutil_copy2, mock_glob
     ):
         mock_get_signed_grub_loader.return_value = None
         mock_glob.return_value = []
@@ -381,12 +381,12 @@ class TestBootLoaderConfigGrub2:
         mock_Path_create.assert_called_once_with(
             'root_dir/EFI/BOOT'
         )
-        mock_shutil_copy.assert_called_once_with(
+        mock_shutil_copy2.assert_called_once_with(
             'config_file', 'root_dir/EFI/BOOT/grub.cfg'
         )
 
         # 3. run: check with vendor directory read from grub binary
-        mock_shutil_copy.reset_mock()
+        mock_shutil_copy2.reset_mock()
         mock_Path_create.reset_mock()
         strings_out = Mock()
         strings_out.output = '/EFI/ubuntu'
@@ -401,12 +401,12 @@ class TestBootLoaderConfigGrub2:
         mock_Path_create.assert_called_once_with(
             'root_dir/EFI/ubuntu'
         )
-        mock_shutil_copy.assert_called_once_with(
+        mock_shutil_copy2.assert_called_once_with(
             'config_file', 'root_dir/EFI/ubuntu/grub.cfg'
         )
 
         # 4. run: check with installed vendor directory
-        mock_shutil_copy.reset_mock()
+        mock_shutil_copy2.reset_mock()
         mock_Path_create.reset_mock()
         mock_get_signed_grub_loader.return_value = None
         mock_glob.return_value = ['root_dir/EFI/fedora/shim.efi']
@@ -417,15 +417,15 @@ class TestBootLoaderConfigGrub2:
         mock_Path_create.assert_called_once_with(
             'root_dir/EFI/fedora'
         )
-        mock_shutil_copy.assert_called_once_with(
+        mock_shutil_copy2.assert_called_once_with(
             'config_file', 'root_dir/EFI/fedora/grub.cfg'
         )
 
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     @patch('os.path.exists')
     @patch('kiwi.bootloader.config.grub2.Command.run')
     def test_setup_zipl2grub_conf_512_byte_target(
-        self, mock_Command_run, mock_exists, mock_shutil_copy
+        self, mock_Command_run, mock_exists, mock_shutil_copy2
     ):
         path_return_values = [True, False]
 
@@ -457,26 +457,26 @@ class TestBootLoaderConfigGrub2:
                 '    targetblocksize = 512\n' \
                 '    targetoffset = 2048' \
                 in file_handle.write.call_args[0][0]
-        mock_shutil_copy.assert_called_once_with(
+        mock_shutil_copy2.assert_called_once_with(
             'root_dir/etc/default/zipl2grub.conf.in',
             'root_dir/etc/default/zipl2grub.conf.in.orig'
         )
         path_return_values = [True, True]
-        mock_shutil_copy.reset_mock()
+        mock_shutil_copy2.reset_mock()
         with patch('builtins.open', create=True) as mock_open:
             file_handle = mock_open.return_value.__enter__.return_value
             file_handle.read.return_value = zipl_config
             self.bootloader._setup_zipl2grub_conf()
-        mock_shutil_copy.assert_called_once_with(
+        mock_shutil_copy2.assert_called_once_with(
             'root_dir/etc/default/zipl2grub.conf.in.orig',
             'root_dir/etc/default/zipl2grub.conf.in'
         )
 
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     @patch('os.path.exists')
     @patch('kiwi.bootloader.config.grub2.Command.run')
     def test_setup_zipl2grub_conf_4096_byte_target(
-        self, mock_Command_run, mock_exists, mock_shutil_copy
+        self, mock_Command_run, mock_exists, mock_shutil_copy2
     ):
         path_return_values = [True, False]
         command_return_values = [
@@ -1754,9 +1754,9 @@ class TestBootLoaderConfigGrub2:
     @patch('kiwi.bootloader.config.grub2.Path.create')
     @patch('kiwi.bootloader.config.grub2.DataSync')
     @patch('os.path.exists')
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     def test_setup_install_boot_images_ppc(
-        self, mock_shutil_copy, mock_exists, mock_sync,
+        self, mock_shutil_copy2, mock_exists, mock_sync,
         mock_Path_create, mock_Path_which, mock_command,
         mock_get_grub_bios_core_loader, mock_get_unsigned_grub_loader,
         mock_get_boot_path
@@ -1817,9 +1817,9 @@ class TestBootLoaderConfigGrub2:
     @patch('kiwi.bootloader.config.grub2.Path.create')
     @patch('kiwi.bootloader.config.grub2.DataSync')
     @patch('os.path.exists')
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     def test_setup_install_boot_images_efi(
-        self, mock_shutil_copy, mock_exists, mock_sync,
+        self, mock_shutil_copy2, mock_exists, mock_sync,
         mock_Path_create, mock_Path_which, mock_command,
         mock_get_grub_bios_core_loader, mock_get_unsigned_grub_loader,
         mock_get_boot_path
@@ -1959,7 +1959,7 @@ class TestBootLoaderConfigGrub2:
             call(exclude=['*.module'], options=['-a']),
             call(exclude=['*.module'], options=['-a'])
         ]
-        assert mock_shutil_copy.call_args_list == [
+        assert mock_shutil_copy2.call_args_list == [
             call(
                 'boot_dir/boot/grub2/earlyboot.cfg',
                 'root_dir/boot/grub2/earlyboot.cfg'
@@ -2229,9 +2229,9 @@ class TestBootLoaderConfigGrub2:
     @patch('kiwi.bootloader.config.grub2.DataSync')
     @patch('os.path.exists')
     @patch('kiwi.defaults.Defaults.get_grub_path')
-    @patch('shutil.copy')
+    @patch('shutil.copy2')
     def test_setup_install_boot_images_with_theme_not_existing(
-        self, mock_shutil_copy, mock_get_grub_path,
+        self, mock_shutil_copy2, mock_get_grub_path,
         mock_exists, mock_sync, mock_Path_which, mock_command
     ):
         Defaults.set_platform_name('x86_64')
diff --git a/test/unit/bootloader/install/grub2_test.py b/test/unit/bootloader/install/grub2_test.py
index aeebda16..73f17d23 100644
--- a/test/unit/bootloader/install/grub2_test.py
+++ b/test/unit/bootloader/install/grub2_test.py
@@ -403,8 +403,9 @@ class TestBootLoaderInstallGrub2:
     @patch('kiwi.bootloader.install.grub2.MountManager')
     @patch('os.path.exists')
     @patch('os.access')
+    @patch('shutil.copy2')
     def test_secure_boot_install(
-        self, mock_access, mock_exists,
+        self, mock_shutil_copy2, mock_access, mock_exists,
         mock_mount_manager, mock_command
     ):
         mock_access.return_value = True
@@ -419,16 +420,18 @@ class TestBootLoaderInstallGrub2:
 
         self.bootloader.secure_boot_install()
 
+        assert mock_shutil_copy2.call_args_list == [
+            call(
+                'tmp_root/usr/sbin/grub2-install',
+                'tmp_root/usr/sbin/grub2-install.orig'
+            ),
+            call(
+                'tmp_root/bin/true',
+                'tmp_root/usr/sbin/grub2-install'
+            )
+        ]
+
         assert mock_command.call_args_list == [
-            call([
-                'chroot', 'tmp_root',
-                'cp', '-p', '/usr/sbin/grub2-install',
-                '/usr/sbin/grub2-install.orig'
-            ]),
-            call([
-                'chroot', 'tmp_root',
-                'cp', '/bin/true', '/usr/sbin/grub2-install'
-            ]),
             call([
                 'chroot', 'tmp_root', 'shim-install', '--removable',
                 '/dev/some-device'
diff --git a/test/unit/system/prepare_test.py b/test/unit/system/prepare_test.py
index 48dc7170..3908f29f 100644
--- a/test/unit/system/prepare_test.py
+++ b/test/unit/system/prepare_test.py
@@ -399,7 +399,10 @@ class TestSystemPrepare:
 
         self.system.install_bootstrap(self.manager)
 
-        tar.extract.assert_called_once_with('root_dir/foo')
+        assert tar.extract.call_args_list == [
+            call('root_dir/foo'),
+            call('root_dir/etc')
+        ]
 
     @patch('kiwi.xml_state.XMLState.get_bootstrap_packages_sections')
     def test_install_bootstrap_skipped(self, mock_bootstrap_section):