Reference: Elena Lorente; Miguel Marcilla; Patricia G de la Sota; Adriana Quijada-Freire; Carmen Mir; Daniel López. "Acid Stripping after Infection Improves the Detection of Viral HLA Class I Natural Ligands Identified by Mass Spectrometry." International journal of molecular sciences (2021).

Epitope: 3BHS-14-22
Chemical type: Peptide from protein
Sequence: GRYIVKLLI
Position: 14-22
Source molecule (GenBank): P26670.1
Assay category: MhcLigandElution
Result: Positive

Epitope: A27-99-107
Chemical type: Peptide from protein
Sequence: KRNDEVLFR
Position: 73-81
Source molecule (GenBank): P11258.3
Assay category: MhcLigandElution
Result: Positive

Epitope: A31-8-16
Chemical type: Peptide from protein
Sequence: LRFLEKTSF
Position: 8-16
Source molecule (GenBank): P24760.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: A31-8-16
Chemical type: Peptide from protein
Sequence: LRFLEKTSF
Position: 8-16
Source molecule (GenBank): P24760.1
Assay category: MhcLigandElution
Result: Positive

Epitope: A32-206-214
Chemical type: Peptide from protein
Sequence: YRHVPILGR
Position: 143-151
Source molecule (GenBank): P68615.2
Assay category: MhcLigandElution
Result: Positive

Epitope: A37-254-263
Chemical type: Peptide from protein
Sequence: GRIDNINMSI
Position: 249-258
Source molecule (GenBank): P24762.1
Assay category: MhcLigandElution
Result: Positive

Epitope: A52-77-86
Chemical type: Peptide from protein
Sequence: GRLFNEIKKF
Position: 77-86
Source molecule (GenBank): Q01220.1
Assay category: MhcLigandElution
Result: Positive

Epitope: B1-103-110
Chemical type: Peptide from protein
Sequence: YRFLVINR
Position: 96-103
Source molecule (GenBank): P16913.1
Assay category: MhcLigandElution
Result: Positive

Epitope: B1-103-111
Chemical type: Peptide from protein
Sequence: YRFLVINRL
Position: 96-104
Source molecule (GenBank): P16913.1
Assay category: MhcLigandElution
Result: Positive

Epitope: B1-210-219
Chemical type: Peptide from protein
Sequence: RRGDLETLGY
Position: 210-219
Source molecule (GenBank): P16913.1
Assay category: MhcLigandElution
Result: Positive

Epitope: B1-229-240
Chemical type: Peptide from protein
Sequence: IRWLGGILPWTK
Position: 222-233
Source molecule (GenBank): P16913.1
Assay category: MhcLigandElution
Result: Positive

Epitope: B18-232-242
Chemical type: Peptide from protein
Sequence: VRIKNDIVVSR
Position: 228-238
Source molecule (GenBank): P25213.1
Assay category: MhcLigandElution
Result: Positive

Epitope: B25-111-123
Chemical type: Peptide from protein
Sequence: TRFNPSVLKILLH
Position: 75-87
Source molecule (GenBank): Q805H0.1
Assay category: MhcLigandElution
Result: Positive

Epitope: C10-22-30
Chemical type: Peptide from protein
Sequence: IRNDIRELF
Position: 22-30
Source molecule (GenBank): P03296.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: C10-22-30
Chemical type: Peptide from protein
Sequence: IRNDIRELF
Position: 22-30
Source molecule (GenBank): P03296.1
Assay category: MhcLigandElution
Result: Positive

Epitope: C10-323-331
Chemical type: Peptide from protein
Sequence: TRFYFNMPK
Position: 323-331
Source molecule (GenBank): P03296.1
Assay category: MhcLigandElution
Result: Positive

Epitope: C13-90-99
Chemical type: Peptide from protein
Sequence: SRFTIGRALF
Position: 90-99
Source molecule (GenBank): P17365.1
Assay category: MhcLigandElution
Result: Positive

Epitope: C13-90-100
Chemical type: Peptide from protein
Sequence: SRFTIGRALFK
Position: 90-100
Source molecule (GenBank): P17365.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: C13-90-100
Chemical type: Peptide from protein
Sequence: SRFTIGRALFK
Position: 90-100
Source molecule (GenBank): P17365.1
Assay category: MhcLigandElution
Result: Positive

Epitope: D2-63-72
Chemical type: Peptide from protein
Sequence: ARFDNKSIYR
Position: 53-62
Source molecule (GenBank): P04300.1
Assay category: MhcLigandElution
Result: Positive

Epitope: D2-63-73
Chemical type: Peptide from protein
Sequence: ARFDNKSIYRI
Position: 53-63
Source molecule (GenBank): P04300.1
Assay category: MhcLigandElution
Result: Positive

Epitope: D9-69-78
Chemical type: Peptide from protein
Sequence: FRVSTKLLRF
Position: 69-78
Source molecule (GenBank): P04311.1
Assay category: MhcLigandElution
Result: Positive

Epitope: D13-107-117
Chemical type: Peptide from protein
Sequence: GRFGYVPYVGY
Position: 82-92
Source molecule (GenBank): P68440.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: D13-107-117
Chemical type: Peptide from protein
Sequence: GRFGYVPYVGY
Position: 82-92
Source molecule (GenBank): P68440.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DUT-64-72
Chemical type: Peptide from protein
Sequence: GRIAPRSGL
Position: 64-72
Source molecule (GenBank): P17374.2
Assay category: MhcLigandElution
Result: Positive

Epitope: DUT-64-74
Chemical type: Peptide from protein
Sequence: GRIAPRSGLSL
Position: 64-74
Source molecule (GenBank): P17374.2
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: DUT-64-74
Chemical type: Peptide from protein
Sequence: GRIAPRSGLSL
Position: 64-74
Source molecule (GenBank): P17374.2
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-130-138
Chemical type: Peptide from protein
Sequence: SRNPSKMVY
Position: 129-137
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-179-187
Chemical type: Peptide from protein
Sequence: IRILVEERF
Position: 178-186
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-179-188
Chemical type: Peptide from protein
Sequence: IRILVEERFY
Position: 178-187
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-197-206
Chemical type: Peptide from protein
Sequence: WRIIGTQVDK
Position: 196-205
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-219-228
Chemical type: Peptide from protein
Sequence: ARYNLKPMYR
Position: 218-227
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-274-287
Chemical type: Peptide from protein
Sequence: YRYDDDVENGFIGL
Position: 273-286
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E6-372-383
Chemical type: Peptide from protein
Sequence: KRFDELDINNSY
Position: 372-383
Source molecule (GenBank): P21607.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E8-27-35
Chemical type: Peptide from protein
Sequence: SRGLSRPLM
Position: 27-35
Source molecule (GenBank): P23372.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ETF1-31-39
Chemical type: Peptide from protein
Sequence: VRTIIDENR
Position: 31-39
Source molecule (GenBank): P04308.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ETF1-63-71
Chemical type: Peptide from protein
Sequence: SRFKKVYIL
Position: 63-71
Source molecule (GenBank): P04308.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ETF1-453-461
Chemical type: Peptide from protein
Sequence: GRSIRKFSY
Position: 453-461
Source molecule (GenBank): P04308.1
Assay category: MhcLigandElution
Result: Positive

Epitope: F11-247-255
Chemical type: Peptide from protein
Sequence: YRQQLELAY
Position: 247-255
Source molecule (GenBank): Q80HX7.1
Assay category: MhcLigandElution
Result: Positive

Epitope: F12-275-283
Chemical type: Peptide from protein
Sequence: TRTIILVGY
Position: 275-283
Source molecule (GenBank): Q80HX6.1
Assay category: MhcLigandElution
Result: Positive

Epitope: F17-79-87
Chemical type: Peptide from protein
Sequence: MRTDMLQNM
Position: 79-87
Source molecule (GenBank): P07396.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: F17-79-87
Chemical type: Peptide from protein
Sequence: MRTDMLQNM
Position: 79-87
Source molecule (GenBank): P07396.1
Assay category: MhcLigandElution
Result: Positive

Epitope: F17-89-101
Chemical type: Peptide from protein
Sequence: AANRDNVASRLLN
Position: 89-101
Source molecule (GenBank): P07396.1
Assay category: MhcLigandElution
Result: Positive

Epitope: F17-88-101
Chemical type: Peptide from protein
Sequence: FAANRDNVASRLLN
Position: 88-101
Source molecule (GenBank): P07396.1
Assay category: MhcLigandElution
Result: Positive

Epitope: F7-57-66
Chemical type: Peptide from protein
Sequence: ARVEFGPLYM
Position: 45-54
Source molecule (GenBank): P24359.2
Assay category: MhcLigandElution
Result: Positive

Epitope: F7-83-92
Chemical type: Peptide from protein
Sequence: YRHTIESVYF
Position: 71-80
Source molecule (GenBank): P24359.2
Assay category: MhcLigandElution
Result: Positive

Epitope: G7-99-108
Chemical type: Peptide from protein
Sequence: KRFTHTTAFF
Position: 99-108
Source molecule (GenBank): P68716.1
Assay category: MhcLigandElution
Result: Positive

Epitope: H3-12-26
Chemical type: Peptide from protein
Sequence: PVIDRLPSETFPNVH
Position: 12-26
Source molecule (GenBank): P07240.1
Assay category: MhcLigandElution
Result: Positive

Epitope: H3-217-227
Chemical type: Peptide from protein
Sequence: ARIENEMKINR
Position: 217-227
Source molecule (GenBank): P07240.1
Assay category: MhcLigandElution
Result: Positive

Epitope: H3-266-275
Chemical type: Peptide from protein
Sequence: KRYPGVMYAF
Position: 266-275
Source molecule (GenBank): P07240.1
Assay category: MhcLigandElution
Result: Positive

Epitope: H5-144-153
Chemical type: Peptide from protein
Sequence: ARSDLSDLKV
Position: 128-137
Source molecule (GenBank): P07242.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: H5-144-153
Chemical type: Peptide from protein
Sequence: ARSDLSDLKV
Position: 128-137
Source molecule (GenBank): P07242.1
Assay category: MhcLigandElution
Result: Positive

Epitope: I1-51-59
Chemical type: Peptide from protein
Sequence: VRIPVDLVK
Position: 51-59
Source molecule (GenBank): P16714.2
Assay category: MhcLigandElution
Result: Positive

Epitope: I1-136-144
Chemical type: Peptide from protein
Sequence: KRSATQFNF
Position: 136-144
Source molecule (GenBank): P16714.2
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: I1-136-144
Chemical type: Peptide from protein
Sequence: KRSATQFNF
Position: 136-144
Source molecule (GenBank): P16714.2
Assay category: MhcLigandElution
Result: Positive

Epitope: I1-210-218
Chemical type: Peptide from protein
Sequence: TRLYDYFTR
Position: 210-218
Source molecule (GenBank): P16714.2
Assay category: MhcLigandElution
Result: Positive

Epitope: K1-88-98
Chemical type: Peptide from protein
Sequence: SQFDDKGNTAL
Position: 88-98
Source molecule (GenBank): P04297.2
Assay category: MhcLigandElution
Result: Positive

Epitope: MCE-258-266
Chemical type: Peptide from protein
Sequence: VRNKVVVNF
Position: 243-251
Source molecule (GenBank): P07617.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: MCE-258-266
Chemical type: Peptide from protein
Sequence: VRNKVVVNF
Position: 243-251
Source molecule (GenBank): P07617.1
Assay category: MhcLigandElution
Result: Positive

Epitope: PAP1-23-31
Chemical type: Peptide from protein
Sequence: GRVPSVNEY
Position: 23-31
Source molecule (GenBank): P23371.2
Assay category: MhcLigandElution
Result: Positive

Epitope: RAP94-292-300
Chemical type: Peptide from protein
Sequence: ARDEPVFVK
Position: 292-300
Source molecule (GenBank): P68438.2
Assay category: MhcLigandElution
Result: Positive

Epitope: RP19-96-104
Chemical type: Peptide from protein
Sequence: GRLPLVSEF
Position: 96-104
Source molecule (GenBank): P68611.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RP22-20-29
Chemical type: Peptide from protein
Sequence: ARDPYAVINR
Position: 20-29
Source molecule (GenBank): P68609.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RP132-241-249
Chemical type: Peptide from protein
Sequence: SRVSLEFIR
Position: 241-249
Source molecule (GenBank): Q76ZP7.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RP132-272-281
Chemical type: Peptide from protein
Sequence: KRITESITDF
Position: 272-281
Source molecule (GenBank): Q76ZP7.1
Assay category: MhcLigandElution
Result: Positive

Epitope: SPI2-70-82
Chemical type: Peptide from protein
Sequence: GRYSAVFKDSFLR
Position: 70-82
Source molecule (GenBank): P15059.2
Assay category: MhcLigandElution
Result: Positive

Epitope: VGF-128-137
Chemical type: Peptide from protein
Sequence: RRTKLPIQDM
Position: 128-137
Source molecule (GenBank): P01136.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: VGF-128-137
Chemical type: Peptide from protein
Sequence: RRTKLPIQDM
Position: 128-137
Source molecule (GenBank): P01136.1
Assay category: MhcLigandElution
Result: Positive

Epitope: VITF3-16-25
Chemical type: Peptide from protein
Sequence: ARTIFNFHLI
Position: 16-25
Source molecule (GenBank): Q80HV2.1
Assay category: MhcLigandElution
Result: Positive

Epitope: VITF3-106-114
Chemical type: Peptide from protein
Sequence: SRTVEIFER
Position: 106-114
Source molecule (GenBank): Q80HV2.1
Assay category: MhcLigandElution
Result: Positive

Epitope: VLTF1-18-26
Chemical type: Peptide from protein
Sequence: IRIKIDKLR
Position: 3-11
Source molecule (GenBank): P68613.1
Assay category: MhcLigandElution
Result: Positive