LiteFold/IEDB huggingface dataset:
Reference: Alice Newey; Beatrice Griffiths; Justine Michaux; Hui Song Pak; Brian J Stevenson; Andrew Woolston; Maria Semiannikova; Georgia Spain; Louise J Barber; Nik Matthews; Sheela Rao; David Watkins; Ian Chau; George Coukos; Julien Racle; David Gfeller; Naureen Starling; David Cunningham; Michal Bassani-Sternberg; Marco Gerlinger. "Immunopeptidomics of colorectal cancer organoids reveals a sparse HLA class I neoantigen landscape and no increase in neoantigens with interferon or MEK-inhibitor treatment." Journal for immunotherapy of cancer (2019).

Epitope: U2SURP peptide
Chemical type: Peptide, no natural source
Sequence: IQEERDERHKR
Assay category: MhcLigandElution
Result: Positive

Epitope: MED25 peptide
Chemical type: Peptide, no natural source
Sequence: SVDANTTL
Assay category: MhcLigandElution
Result: Positive

Epitope: FMO5 peptide
Chemical type: Peptide, no natural source
Sequence: RYVENQRHTI
Assay category: MhcLigandElution
Result: Positive
Reference: Kemin Tan; Min Zhou; Angela J Ahrendt; Norma E C Duke; Nassif Tabaja; William J Ball; Terence L Kirley; Andrew B Norman; Andrzej Joachimiak; Marianne Schiffer; Rosemarie Wilton; P Raj Pokkuluri. "Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2." Acta crystallographica. Section F, Structural biology communications (2019).

Epitope: Benzoylecgonine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 2.63
Reference: Michelle S Miller; Jacqueline Douglass; Michael S Hwang; Andrew D Skora; Michael Murphy; Nickolas Papadopoulos; Kenneth W Kinzler; Bert Vogelstein; Shibin Zhou; Sandra B Gabelli. "An engineered antibody fragment targeting mutant β-catenin via major histocompatibility complex I neoantigen presentation." The Journal of biological chemistry (2019).

Epitope: ß-catenin 41-49
Chemical type: Peptide from protein
Sequence: TTAPSLSGK
Position: 41-49
Source molecule (GenBank): P35222.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.2

Epitope: ß-catenin 41-49
Chemical type: Peptide from protein
Sequence: TTAPSLSGK
Position: 41-49
Source molecule (GenBank): P35222.1
Assay category: MhcBinding
Result: Positive

Epitope: Blast 1
Chemical type: Peptide from protein
Sequence: QLLDFLSGK
Position: 131-139
Source molecule (GenBank): Q9NWS1.3
Assay category: MhcBinding
Result: Positive-Low

Epitope: Blast 3
Chemical type: Peptide from protein
Sequence: IIYNFLSGK
Position: 356-364
Source molecule (GenBank): O43613.2
Assay category: MhcBinding
Result: Positive

Epitope: Blast 4
Chemical type: Peptide from protein
Sequence: RTVTFLSGK
Position: 459-467
Source molecule (GenBank): Q14995.3
Assay category: MhcBinding
Result: Positive

Epitope: Blast 5
Chemical type: Peptide from protein
Sequence: TAFDPFLGGK
Position: 225-234
Source molecule (GenBank): Q92598.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: Blast 6
Chemical type: Peptide from protein
Sequence: RIIPFLPGK
Position: 70-78
Source molecule (GenBank): Q5TCZ1.1
Assay category: MhcBinding
Result: Positive-Intermediate

Epitope: Blast 7
Chemical type: Peptide from protein
Sequence: IQNPFLSSK
Position: 1206-1214
Source molecule (GenBank): Q6R2W3.1
Assay category: MhcBinding
Result: Positive-Intermediate
Reference: Vincenzo Alterio; Markus Kellner; Davide Esposito; Friederike Liesche-Starnecker; Silvia Bua; Claudiu T Supuran; Simona Maria Monti; Reinhard Zeidler; Giuseppina De Simone. "Biochemical and Structural Insights into Carbonic Anhydrase XII/Fab6A10 Complex." Journal of molecular biology (2019).

Epitope: Epitope of Fab 6A10 on Carbonic Anhydrase 12
Chemical type: Discontinuous protein residues
Discontinuous residues: K31, W32, Y47, L88, T90, N92, H94, K97, Q117, D156, A157, S158, S161, K196, G197, E199, F201, T227, P228, P229, H261
Source molecule (GenBank): O43570.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab 6A10 on Carbonic Anhydrase 12
Chemical type: Discontinuous protein residues
Discontinuous residues: K31, W32, Y47, L88, T90, N92, H94, K97, Q117, D156, A157, S158, S161, K196, G197, E199, F201, T227, P228, P229, H261
Source molecule (GenBank): O43570.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab 6A10 on Carbonic Anhydrase 12
Chemical type: Discontinuous protein residues
Discontinuous residues: K31, W32, Y47, L88, T90, N92, H94, K97, Q117, D156, A157, S158, S161, K196, G197, E199, F201, T227, P228, P229, H261
Source molecule (GenBank): O43570.1
Assay category: BCell
Result: Positive
Quantitative measurement: 12.8

Epitope: Epitope of Fab 6A10 on Carbonic Anhydrase 12
Chemical type: Discontinuous protein residues
Discontinuous residues: K31, W32, Y47, L88, T90, N92, H94, K97, Q117, D156, A157, S158, S161, K196, G197, E199, F201, T227, P228, P229, H261
Source molecule (GenBank): O43570.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab 6A10 on Carbonic Anhydrase 12
Chemical type: Discontinuous protein residues
Discontinuous residues: K31, W32, Y47, L88, T90, N92, H94, K97, Q117, D156, A157, S158, S161, K196, G197, E199, F201, T227, P228, P229, H261
Source molecule (GenBank): O43570.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab 6A10 on Carbonic Anhydrase 12
Chemical type: Discontinuous protein residues
Discontinuous residues: K31, W32, Y47, L88, T90, N92, H94, K97, Q117, D156, A157, S158, S161, K196, G197, E199, F201, T227, P228, P229, H261
Source molecule (GenBank): O43570.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.79
Reference: Hamza Ibrahim Isa; Gezina Catharina Helena Ferreira; Jan Ernst Crafford; Christoffel Jacobus Botha. "Raising antibodies against epoxyscillirosidine, the toxic principle contained in Moraea pallida Bak. (Iridaceae), in rabbits." Journal of immunological methods (2019).

Epitope: epoxyscillirosidine [moraea pallida]
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F

Epitope: epoxyscillirosidine [moraea pallida]
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low
Host: F

Epitope: epoxyscillirosidine [moraea pallida]
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F

Epitope: Bufalin
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low
Host: F

Epitope: proscillaridin [Drimia maritima]
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low
Host: F
Reference: Kimiko Kuroki; Haruki Matsubara; Ryo Kanda; Naoyuki Miyashita; Mitsunori Shiroishi; Yuko Fukunaga; Jun Kamishikiryo; Atsushi Fukunaga; Hideo Fukuhara; Kaoru Hirose; Joan S Hunt; Yuji Sugita; Shunsuke Kita; Toyoyuki Ose; Katsumi Maenaka. "Structural and Functional Basis for LILRB Immune Checkpoint Receptor Recognition of HLA-G Isoforms." Journal of immunology (Baltimore, Md. : 1950) (2019).

Epitope: Histone H2A.J peptide
Chemical type: Peptide from protein
Sequence: RIIPRHLQL
Position: 78-86
Source molecule (GenBank): Q9BTM1.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 3.149
Reference: Anthony H Nguyen; Alex R B Thomsen; Thomas J Cahill; Rick Huang; Li-Yin Huang; Tara Marcink; Oliver B Clarke; Søren Heissel; Ali Masoudi; Danya Ben-Hail; Fadi Samaan; Venkata P Dandey; Yong Zi Tan; Chuan Hong; Jacob P Mahoney; Sarah Triest; John Little; Xin Chen; Roger Sunahara; Jan Steyaert; Henrik Molina; Zhiheng Yu; Amedee des Georges; Robert J Lefkowitz. "Structure of an endosomal signaling GPCR-G protein-β-arrestin megacomplex." Nature structural & molecular biology (2019).

Epitope: Epitope of nanobody Nb35 on G protein heterotrimer
Chemical type: Region on multi-chain protein
Discontinuous residues: A: D229, E230, R232, M255, T263, N264, Q267, E268, N271, L272, S275, N278, N279, Y311, P313, E314; B: R8, K15, T184, C204, D205, A206, T223, E226, S227, D228, D246, I270
Source molecule (GenBank): P63092.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab30 on beta-arrestin-1
Chemical type: Discontinuous protein residues
Discontinuous residues: R7, H210, G211, P213, T275, P276, F277, L278, A279, R282, D297, N299, L300, H353, P354, E358
Source molecule (GenBank): P17870.1
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody 32 on Vasopressin V2 receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: C358, A366
Source molecule (GenBank): P30518.1
Assay category: BCell
Result: Positive
Reference: Rebecca Ebenhoch; Abbas Akhdar; Marc R Reboll; Mortimer Korf-Klingebiel; Priyanka Gupta; Julie Armstrong; Yining Huang; Lee Frego; Irina Rybina; John Miglietta; Anton Pekcec; Kai C Wollert; Herbert Nar. "Crystal structure and receptor-interacting residues of MYDGF - a protein mediating ischemic tissue repair." Nature communications (2019).

Epitope: Epitope of Fab8 on myeloid-derived growth factor
Chemical type: Discontinuous protein residues
Discontinuous residues: V38, A39, F40, D41, R43, P44, V47, H49, F51, G72, T73, N74, Q76, Q78
Source molecule (GenBank): Q969H8.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab8 on myeloid-derived growth factor
Chemical type: Discontinuous protein residues
Discontinuous residues: V38, A39, F40, D41, R43, P44, V47, H49, F51, G72, T73, N74, Q76, Q78
Source molecule (GenBank): Q969H8.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab8 on myeloid-derived growth factor
Chemical type: Discontinuous protein residues
Discontinuous residues: V38, A39, F40, D41, R43, P44, V47, H49, F51, G72, T73, N74, Q76, Q78
Source molecule (GenBank): Q969H8.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.58
Reference: Peter Reinink; Adam Shahine; Stephanie Gras; Tan-Yun Cheng; Rachel Farquhar; Kattya Lopez; Sara A Suliman; Josephine F Reijneveld; Jérôme Le Nours; Li Lynn Tan; Segundo R León; Judith Jimenez; Roger Calderon; Leonid Lecca; Megan B Murray; Jamie Rossjohn; D Branch Moody; Ildiko Van Rhijn. "A TCR β-Chain Motif Biases toward Recognition of Human CD1 Proteins." Journal of immunology (Baltimore, Md. : 1950) (2019).

Epitope: glucose monomycolate (GMM)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: glucose monomycolate (GMM)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: glucose monomycolate (GMM)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 6900.0

Epitope: glucose monomycolate (GMM)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: skin
Culture conditions: Cell Line / Clone

Epitope: glucose monomycolate (GMM)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: glucose monomycolate (GMM)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: mycolic acid (MA)
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: mycolic acid (MA)
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: phosphatidylglycerol
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: phosphatidylglycerol
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: phosphatidylglycerol
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: phosphatidylglycerol
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: sulfoglycolipid 37(SL 37)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Terry C C Lim Kam Sian; Saranjah Indumathy; Hanim Halim; Anja Greule; Max J Cryle; Paul Bowness; Jamie Rossjohn; Stephanie Gras; Anthony W Purcell; Ralf B Schittenhelm. "Allelic association with ankylosing spondylitis fails to correlate with human leukocyte antigen B27 homodimer formation." The Journal of biological chemistry (2019).

Epitope: LRN
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.44

Epitope: LRN
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.38

Epitope: LRN
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.53

Epitope: LRN
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.53

Epitope: LRN
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 63.5

Epitope: LRN
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 60.7

Epitope: KK10
Chemical type: Peptide from protein
Sequence: KRWIILGLNK
Position: 263-272
Source molecule (GenBank): P04591.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.52

Epitope: KK10
Chemical type: Peptide from protein
Sequence: KRWIILGLNK
Position: 263-272
Source molecule (GenBank): P04591.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 62.3

Epitope: KK10
Chemical type: Peptide from protein
Sequence: KRWIILGLNK
Position: 263-272
Source molecule (GenBank): P04591.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 60.5
Reference: Deepak Koirala; Anna Lewicka; Yelena Koldobskaya; Hao Huang; Joseph A Piccirilli. "Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation." ACS chemical biology (2020).

Epitope: hepatitis C virus IRES JIIIabc RNA
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 1.807

Epitope: hepatitis C virus IRES JIIIabc RNA
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 2.75

Epitope: hepatitis C virus IRES JIIIabc RNA
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: hepatitis C virus IRES JIIIabc RNA
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: hepatitis C virus IRES JIIIabc RNA
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 28.0

Epitope: hepatitis C virus IRES JIIIabc RNA
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 35.0
Reference: Xueyong Zhu; Hannah L Turner; Shanshan Lang; Ryan McBride; Sandhya Bangaru; Iuliia M Gilchuk; Wenli Yu; James C Paulson; James E Crowe; Andrew B Ward; Ian A Wilson. "Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies." Cell host & microbe (2019).

Epitope: NA-45 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: R114, N142, I145, H146, D147, R148, N195, N196, I219, R221, A243, E273, E274, R289, N291, N342, N343, R367, Y401, R427, P428, K429, D431, W434
Source molecule (GenBank): AGL44440.1
Assay category: BCell
Result: Positive

Epitope: NA-45 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: R114, N142, I145, H146, D147, R148, N195, N196, I219, R221, A243, E273, E274, R289, N291, N342, N343, R367, Y401, R427, P428, K429, D431, W434
Source molecule (GenBank): AGL44440.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.3

Epitope: NA-73 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: H146, R148, P194, N195, N196, R217, N218, S242, T244, G245, P246, N341, N342
Source molecule (GenBank): YP_009118481.1
Assay category: BCell
Result: Positive

Epitope: NA-73 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: H146, R148, P194, N195, N196, R217, N218, S242, T244, G245, P246, N341, N342
Source molecule (GenBank): YP_009118481.1
Assay category: BCell
Result: Positive

Epitope: NA-80 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: N326, D327, P328, N329, I330, K332, D335, Y337, P338, R383
Source molecule (GenBank): AGL44440.1
Assay category: BCell
Result: Positive

Epitope: NA-80 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: N326, D327, P328, N329, I330, K332, D335, Y337, P338, R383
Source molecule (GenBank): AGL44440.1
Assay category: BCell
Result: Positive

Epitope: NA-22 Fab epitope
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T89, N91, A354, K374, P376, I387, Q388, T447, E448, F449; B: N213, W215, R217, R250, Y252, I259, L260, W262
Source molecule (GenBank): AGL44440.1
Assay category: BCell
Result: Positive

Epitope: NA-22 Fab epitope
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T89, N91, A354, K374, P376, I387, Q388, T447, E448, F449; B: N213, W215, R217, R250, Y252, I259, L260, W262
Source molecule (GenBank): AGL44440.1
Assay category: BCell
Result: Positive
Reference: Victoria A Avanzato; Kasopefoluwa Y Oguntuyo; Marina Escalera-Zamudio; Bernardo Gutierrez; Michael Golden; Sergei L Kosakovsky Pond; Rhys Pryce; Thomas S Walter; Jeffrey Seow; Katie J Doores; Oliver G Pybus; Vincent J Munster; Benhur Lee; Thomas A Bowden. "A structural basis for antibody-mediated neutralization of Nipah virus reveals a site of vulnerability at the fusion glycoprotein apex." Proceedings of the National Academy of Sciences of the United States of America (2019).

Epitope: mAb66 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: I62, P63, N64, V65, S66, N67, M68, S69, Q70, C71, T72, G73, S74, M76, E77, K80, E152, S153, N155, E196, S273, Y274
Source molecule (GenBank): Q9IH63.1
Assay category: BCell
Result: Positive

Epitope: mAb66 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: I62, P63, N64, V65, S66, N67, M68, S69, Q70, C71, T72, G73, S74, M76, E77, K80, E152, S153, N155, E196, S273, Y274
Source molecule (GenBank): Q9IH63.1
Assay category: BCell
Result: Positive

Epitope: mAb66 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: I62, P63, N64, V65, S66, N67, M68, S69, Q70, C71, T72, G73, S74, M76, E77, K80, E152, S153, N155, E196, S273, Y274
Source molecule (GenBank): Q9IH63.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.2
Reference: Jon M Steichen; Ying-Cing Lin; Colin Havenar-Daughton; Simone Pecetta; Gabriel Ozorowski; Jordan R Willis; Laura Toy; Devin Sok; Alessia Liguori; Sven Kratochvil; Jonathan L Torres; Oleksandr Kalyuzhniy; Eleonora Melzi; Daniel W Kulp; Sebastian Raemisch; Xiaozhen Hu; Steffen M Bernard; Erik Georgeson; Nicole Phelps; Yumiko Adachi; Michael Kubitz; Elise Landais; Jeffrey Umotoy; Amanda Robinson; Bryan Briney; Ian A Wilson; Dennis R Burton; Andrew B Ward; Shane Crotty; Facundo D Batista; William R Schief. "A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses." Science (New York, N.Y.) (2019).

Epitope: Epitope of mature BG18 on HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: N135, N136, I137, T138, D139, D319, I320, I321, G322, D323, I324, R325, Q326, H328, T412
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mature BG18 on HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: N135, N136, I137, T138, D139, D319, I320, I321, G322, D323, I324, R325, Q326, H328, T412
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mature BG18 on HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: N135, N136, I137, T138, D139, D319, I320, I321, G322, D323, I324, R325, Q326, H328, T412
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive

Epitope: Epitope of HMP1 Fab on N332-GT5 HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: P106, K107, S110, M111, H294, R296, M297, H299, I383, P385
Source molecule (GenBank): 6NF5_A
Assay category: BCell
Result: Positive

Epitope: Epitope of HMP1 Fab on N332-GT5 HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: P106, K107, S110, M111, H294, R296, M297, H299, I383, P385
Source molecule (GenBank): 6NF5_A
Assay category: BCell
Result: Positive
Quantitative measurement: 10.0

Epitope: Epitope of HMP42 Fab on HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: P106, K107, L108, R109, S110, M111, R296, M297, I383
Source molecule (GenBank): 6NF5_A
Assay category: BCell
Result: Positive

Epitope: Epitope of RM20A3 Fab on HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: K652, N653, Q655, D656, L657, A659, L660, D661
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive

Epitope: Epitope of RM20A3 Fab on HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: K652, N653, Q655, D656, L657, A659, L660, D661
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive
Reference: Shunsei Hirohata; Keiko Tanaka. "Differential expression of antibodies to NMDA receptor in anti-NMDA receptor encephalitis and in neuropsychiatric systemic lupus erythematosus." Lupus science & medicine (2019).

Epitope: NMDA receptor subunit NR2 epitope
Chemical type: Peptide from protein
Sequence: DWEYSVWLSN
Assay category: BCell
Result: Positive
Host:  14-71 years

Epitope: NMDA receptor subunit NR2 epitope
Chemical type: Peptide from protein
Sequence: DWEYSVWLSN
Assay category: BCell
Result: Negative
Reference: Paul E Gray; Hugh McCarthy; Owen M Siggs; Moin A Saleem; Tracy O' Brien; Katie Frith; John B Ziegler; A Richard Kitching; Agnes B Fogo; Billy G Hudson; Vadim Pedchenko. "Molecular Analysis of Goodpasture's Disease Following Hematopoietic Stem Cell Transplant in a Pediatric Patient, Recalls the Conformeropathy of Wild-Type Anti-GBM Disease." Frontiers in immunology (2019).

Epitope: EA
Chemical type: Peptide from protein
Sequence: TAIPSCPEGTVPLYS
Position: 1455-1469
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive
MHC allele types: 436
Host: M 12 years

Epitope: EB
Chemical type: Peptide from protein
Sequence: TDIPPCPHGWISLWK
Position: 1565-1579
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive-Low
MHC allele types: 436
Host: M 12 years
Reference: Hidetoshi Akimoto; Emi Fukuda-Kawaguchi; Omar Duramad; Yasuyuki Ishii; Kazunari Tanabe. "A Novel Liposome Formulation Carrying Both an Insulin Peptide and a Ligand for Invariant Natural Killer T Cells Induces Accumulation of Regulatory T Cells to Islets in Nonobese Diabetic Mice." Journal of diabetes research (2019).

Epitope: Insulin B chain 9-23 peptide
Chemical type: Peptide from protein
Sequence: SHLVEALYLVCGERG
Position: 33-47
Source molecule (GenBank): P01326.1
Assay category: TCell
Result: Negative
Host:  4 weeks