Reference: Breaunna Garza; Jacob Calhoun; Paul Norman; Noah Cline; Katherine M Kichula; Ticiana D J Farias; Sharon Sams; Meher Preethi Boorgula; Thomas Danhorn; Bryan R Haugen; Jena D French. "Tumor-infiltrating T Lymphocytes Recognize Thyroid-specific and Neo-antigens in Follicular Cell-derived Thyroid Cancers." The Journal of clinical endocrinology and metabolism (2025).

Epitope: Braf V600E
Chemical type: Peptide, no natural source
Sequence: LTVKIGDFGLATEKSRWSGSHQFEQ
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf V600E
Chemical type: Peptide, no natural source
Sequence: LTVKIGDFGLATEKSRWSGSHQFEQ
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf V600E
Chemical type: Peptide, no natural source
Sequence: LTVKIGDFGLATEKSRWSGSHQFEQ
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf V600E
Chemical type: Peptide, no natural source
Sequence: LTVKIGDFGLATEKSRWSGSHQFEQ
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf V600E
Chemical type: Peptide, no natural source
Sequence: LTVKIGDFGLATEKSRWSGSHQFEQ
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf V600E
Chemical type: Peptide, no natural source
Sequence: LTVKIGDFGLATEKSRWSGSHQFEQ
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf wt
Chemical type: Peptide from protein
Sequence: LTVKIGDFGLATVKSRWSGSHQFEQ
Position: 588-612
Source molecule (GenBank): P15056.4
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf wt
Chemical type: Peptide from protein
Sequence: LTVKIGDFGLATVKSRWSGSHQFEQ
Position: 588-612
Source molecule (GenBank): P15056.4
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf wt
Chemical type: Peptide from protein
Sequence: LTVKIGDFGLATVKSRWSGSHQFEQ
Position: 588-612
Source molecule (GenBank): P15056.4
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf wt
Chemical type: Peptide from protein
Sequence: LTVKIGDFGLATVKSRWSGSHQFEQ
Position: 588-612
Source molecule (GenBank): P15056.4
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf wt
Chemical type: Peptide from protein
Sequence: LTVKIGDFGLATVKSRWSGSHQFEQ
Position: 588-612
Source molecule (GenBank): P15056.4
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: Braf wt
Chemical type: Peptide from protein
Sequence: LTVKIGDFGLATVKSRWSGSHQFEQ
Position: 588-612
Source molecule (GenBank): P15056.4
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: C6-Ret fusion
Chemical type: Peptide, no natural source
Sequence: ENRDLRKASVTIEDPKWEFPRKNLV
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: C6-Ret fusion
Chemical type: Peptide, no natural source
Sequence: ENRDLRKASVTIEDPKWEFPRKNLV
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: C6-Ret fusion
Chemical type: Peptide, no natural source
Sequence: ENRDLRKASVTIEDPKWEFPRKNLV
Assay category: TCell
Result: Positive-Low
Cell type: tumor infiltrating lymphocyte
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: TPM3-NTRK1 fusion
Chemical type: Peptide, no natural source
Sequence: VAKLEKTIDDLEGPAVLAPEDGLAMS
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: TPM3-NTRK1 fusion
Chemical type: Peptide, no natural source
Sequence: VAKLEKTIDDLEGPAVLAPEDGLAMS
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: TPM3-NTRK1 fusion
Chemical type: Peptide, no natural source
Sequence: VAKLEKTIDDLEGPAVLAPEDGLAMS
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: thyroid
Culture conditions: Non-antigen specific activation

Epitope: TPR-NTRK1 fusion
Chemical type: Peptide, no natural source
Sequence: QVASQSlQRTGKDTNSTSGDPVEK
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Non-antigen specific activation

Epitope: TPR-NTRK1 fusion
Chemical type: Peptide, no natural source
Sequence: QVASQSlQRTGKDTNSTSGDPVEK
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Non-antigen specific activation

Epitope: TPR-NTRK1 fusion
Chemical type: Peptide, no natural source
Sequence: QVASQSlQRTGKDTNSTSGDPVEK
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: lymph node
Culture conditions: Non-antigen specific activation