Reference: D D Eckels; H Zhou; T H Bian; H Wang. "Identification of antigenic escape variants in an immunodominant epitope of hepatitis C virus." International immunology (1999).

Epitope: NS3 358-375
Chemical type: Peptide from protein
Sequence: VIKGGRHLIFCHSKKKCD
Position: 1384-1401
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Positive
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1-18
Chemical type: Peptide from protein
Sequence: APITAYAQQTRGLLGCII
Position: 1027-1044
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 8-25
Chemical type: Peptide from protein
Sequence: QQTRGLLGCIITSLTGRD
Position: 1034-1051
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 15-32
Chemical type: Peptide from protein
Sequence: GCIITSLTGRDKNQVEGE
Position: 1041-1058
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 22-39
Chemical type: Peptide from protein
Sequence: TGRDKNQVEGEVQIVSTA
Position: 1048-1065
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 29-46
Chemical type: Peptide from protein
Sequence: VEGEVQIVSTAAQTFLAT
Position: 1055-1072
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 50-67
Chemical type: Peptide from protein
Sequence: GVCWTVYHGAGTRTIASP
Position: 1076-1093
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 57-74
Chemical type: Peptide from protein
Sequence: HGAGTRTIASPKGPVIQM
Position: 1083-1100
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 71-88
Chemical type: Peptide from protein
Sequence: VIQMYTNVDQDLVGWPAP
Position: 1097-1114
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 78-95
Chemical type: Peptide from protein
Sequence: VDQDLVGWPAPQGSRSLT
Position: 1104-1121
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 85-102
Chemical type: Peptide from protein
Sequence: WPAPQGSRSLTPCTCGSS
Position: 1111-1128
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 92-109
Chemical type: Peptide from protein
Sequence: RSLTPCTCGSSDLYLVTR
Position: 1118-1135
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 106-123
Chemical type: Peptide from protein
Sequence: LVTRHADVIPVRRRGDSR
Position: 1132-1149
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 113-130
Chemical type: Peptide from protein
Sequence: VIPVRRRGDSRGSLLSPR
Position: 1139-1156
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 120-137
Chemical type: Peptide from protein
Sequence: GDSRGSLLSPRPISYLKG
Position: 1146-1163
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 127-144
Chemical type: Peptide from protein
Sequence: LSPRPISYLKGSSGGPLL
Position: 1153-1170
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 134-151
Chemical type: Peptide from protein
Sequence: YLKGSSGGPLLCPAGHAV
Position: 1160-1177
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 141-158
Chemical type: Peptide from protein
Sequence: GPLLCPAGHAVGIFRAAV
Position: 1167-1184
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 148-100
Chemical type: Peptide from protein
Sequence: GHAVGIFRAAVCTRGVAK
Position: 1174-1191
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 169-186
Chemical type: Peptide from protein
Sequence: FIPVENLETTMRSPVFTD
Position: 1195-1212
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 176-193
Chemical type: Peptide from protein
Sequence: ETTMRSPVFTDNSSPPVV
Position: 1202-1219
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 183-200
Chemical type: Peptide from protein
Sequence: VFTDNSSPPVVPQSFQVA
Position: 1209-1226
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 204-221
Chemical type: Peptide from protein
Sequence: APTGSGKSTKVPAAYAAQ
Position: 1230-1247
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 211-228
Chemical type: Peptide from protein
Sequence: STKVPAAYAAQGYKVLVL
Position: 1237-1254
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 218-235
Chemical type: Peptide from protein
Sequence: YAAQGYKVLVLNPSVAAT
Position: 1244-1261
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 225-242
Chemical type: Peptide from protein
Sequence: VLVLNPSVAATLGFGAYM
Position: 1251-1268
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 232-249
Chemical type: Peptide from protein
Sequence: VAATLGFGAYMSKAHGID
Position: 1258-1275
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 239-256
Chemical type: Peptide from protein
Sequence: GAYMSKAHGIDPNIRTGV
Position: 1265-1282
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 246-263
Chemical type: Peptide from protein
Sequence: HGIDPNIRTGVRTITTGS
Position: 1272-1289
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 267-284
Chemical type: Peptide from protein
Sequence: YSTYGKFLADGGCSGGAY
Position: 1293-1310
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 274-291
Chemical type: Peptide from protein
Sequence: LADGGCSGGAYDIIICDE
Position: 1300-1317
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Positive
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 281-298
Chemical type: Peptide from protein
Sequence: GGAYDIIICDECHSTDAT
Position: 1307-1324
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Positive
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 288-305
Chemical type: Peptide from protein
Sequence: ICDECHSTDATSILGIGT
Position: 1314-1331
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 302-319
Chemical type: Peptide from protein
Sequence: GIGTVLDQAETAGARLVV
Position: 1328-1345
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 309-326
Chemical type: Peptide from protein
Sequence: QAETAGARLVVLATATPP
Position: 1335-1352
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 316-333
Chemical type: Peptide from protein
Sequence: RLVVLATATPPGSVTVPH
Position: 1342-1359
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 323-340
Chemical type: Peptide from protein
Sequence: ATPPGSVTVPHPNIEEVA
Position: 1349-1366
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 330-347
Chemical type: Peptide from protein
Sequence: TVPHPNIEEVALSTTGEI
Position: 1356-1373
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 337-354
Chemical type: Peptide from protein
Sequence: EEVALSTTGEIPFYGKAI
Position: 1363-1380
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 351-368
Chemical type: Peptide from protein
Sequence: GKAIPLEVIKGGRHLIFC
Position: 1377-1394
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 365-382
Chemical type: Peptide from protein
Sequence: LIFCHSKKKCDELAAKLV
Position: 1391-1408
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 393-410
Chemical type: Peptide from protein
Sequence: RGLDVSVIPTSGDVVVVA
Position: 1419-1436
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 400-417
Chemical type: Peptide from protein
Sequence: IPTSGDVVVVATDALMTG
Position: 1426-1443
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 421-438
Chemical type: Peptide from protein
Sequence: DFDSVIDCNTCVTQTVDF
Position: 1447-1464
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 428-445
Chemical type: Peptide from protein
Sequence: CNTCVTQTVDFSLDPTFT
Position: 1454-1471
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 442-459
Chemical type: Peptide from protein
Sequence: PTFTIETITLPQDAVSRT
Position: 1468-1485
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 456-473
Chemical type: Peptide from protein
Sequence: VSRTQRRGRTGRGKPGIY
Position: 1482-1499
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 463-480
Chemical type: Peptide from protein
Sequence: GRTGRGKPGIYRFVAPGE
Position: 1489-1506
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 470-487
Chemical type: Peptide from protein
Sequence: PGIYRFVAPGERPSGMFD
Position: 1496-1513
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 477-494
Chemical type: Peptide from protein
Sequence: APGERPSGMFDSSVLCEC
Position: 1503-1520
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 493-510
Chemical type: Peptide from protein
Sequence: ECYDAGCAWYELTPAETT
Position: 1519-1536
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 517-534
Chemical type: Peptide from protein
Sequence: MNTPGLPVCQDHLEFWEG
Position: 1543-1560
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 540-557
Chemical type: Peptide from protein
Sequence: THIDAHFLSQTKQSGENL
Position: 1566-1583
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 547-564
Chemical type: Peptide from protein
Sequence: LSQTKQSGENLPYLVAYQ
Position: 1573-1590
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 554-571
Chemical type: Peptide from protein
Sequence: GENLPYLVAYQATVCARA
Position: 1580-1597
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 561-578
Chemical type: Peptide from protein
Sequence: VAYQATVCARAQAPPPSW
Position: 1587-1604
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 568-585
Chemical type: Peptide from protein
Sequence: CARAQAPPPSWDQMWKCL
Position: 1594-1611
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 575-592
Chemical type: Peptide from protein
Sequence: PPSWDQMWKCLIRLKPTL
Position: 1601-1618
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 582-599
Chemical type: Peptide from protein
Sequence: WKCLIRLKPTLHGPTPLL
Position: 1608-1625
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 589-606
Chemical type: Peptide from protein
Sequence: KPTLHGPTPLLYRLGAVQ
Position: 1615-1632
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 596-613
Chemical type: Peptide from protein
Sequence: TPLLYRLGAVQNEITLTH
Position: 1622-1639
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 603-620
Chemical type: Peptide from protein
Sequence: GAVQNEITLTHPVTKYIM
Position: 1629-1646
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 614-631
Chemical type: Peptide from protein
Sequence: PVTKYIMTCMSADLEVVT
Position: 1640-1657
Source molecule (GenBank): P26664.3
Assay category: TCell
Result: Negative
MHC allele types: 336
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo