Reference: Daming Zhou; Piyada Supasa; Chang Liu; Aiste Dijokaite-Guraliuc; Helen M E Duyvesteyn; Muneeswaran Selvaraj; Alexander J Mentzer; Raksha Das; Wanwisa Dejnirattisai; Nigel Temperton; Paul Klenerman; Susanna J Dunachie; Elizabeth E Fry; Juthathip Mongkolsapaya; Jingshan Ren; David I Stuart; Gavin R Screaton. "The SARS-CoV-2 neutralizing antibody response to SD1 and its evasion by BA.2.86." Nature communications (2024).

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-Low

Epitope: Epitope of Fab SD1-1 on BA.4/5 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N527, L528, K530, N531, K532, E549, N551, Q575, T576, L577, E578
Source molecule (GenBank): UPP14409.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-2 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: N532, L533, V534, K535, N536, K537, E554, S555, N556, Q580, T581, L582, E583
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High

Epitope: Epitope of Fab SD1-3 on BA.2.12.1 S
Chemical type: Discontinuous protein residues
Discontinuous residues: K535, E554, S555, N556, K557, K558, F559, P561, R577, T581, L582, E583, I584
Source molecule (GenBank): UOL34873.1
Assay category: BCell
Result: Positive-High