Reference: Mohini Rajasagi; Sachet A Shukla; Edward F Fritsch; Derin B Keskin; David DeLuca; Ellese Carmona; Wandi Zhang; Carrie Sougnez; Kristian Cibulskis; John Sidney; Kristen Stevenson; Jerome Ritz; Donna Neuberg; Vladimir Brusic; Stacey Gabriel; Eric S Lander; Gad Getz; Nir Hacohen; Catherine J Wu. "Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia." Blood (2014).

Epitope: LRRC41
Chemical type: Peptide, no natural source
Sequence: ALPDPILQSI
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 107.0

Epitope: NUP98
Chemical type: Peptide, no natural source
Sequence: APGFNTTPA
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 13.0

Epitope: NUP98
Chemical type: Peptide, no natural source
Sequence: APGFNTTPAT
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 5744.0

Epitope: MUC2
Chemical type: Peptide, no natural source
Sequence: APITTTTTV
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 13.0

Epitope: MUC2
Chemical type: Peptide, no natural source
Sequence: APITTTTTVT
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 3731.0

Epitope: THNSL2
Chemical type: Peptide, no natural source
Sequence: ATIESVQGAK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 42.0

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: AVVMSWAPPV
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 123.0

Epitope: LANCL1
Chemical type: Peptide, no natural source
Sequence: CLTKRSIAF
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 47.0

Epitope: LANCL1
Chemical type: Peptide, no natural source
Sequence: CLTKRSIAFL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 640.0

Epitope: SLC46A1
Chemical type: Peptide, no natural source
Sequence: CSDSKLIGY
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 8.5

Epitope: CNN1
Chemical type: Peptide, no natural source
Sequence: DPKLGTAQPL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 3974.0

Epitope: RALGAP
Chemical type: Peptide, no natural source
Sequence: DWIMVLVLPK
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 2956.0

Epitope: RALGAP
Chemical type: Peptide, no natural source
Sequence: DWIMVLVLPK
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 37826.0

Epitope: THOC6
Chemical type: Peptide, no natural source
Sequence: ELWCRQPPY
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 13776.0

Epitope: SYT15
Chemical type: Peptide, no natural source
Sequence: EMLIKPKEL
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 8.9

Epitope: SCYL2
Chemical type: Peptide, no natural source
Sequence: EVAGFVFDK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 14.0

Epitope: SCYL2
Chemical type: Peptide, no natural source
Sequence: EVAGFVFDKK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 8.8

Epitope: WHSC1L
Chemical type: Peptide, no natural source
Sequence: EVQASKHTK
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 58.0

Epitope: SF3B1
Chemical type: Peptide, no natural source
Sequence: EVRTISALAI
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 2322.0

Epitope: SF3B1
Chemical type: Peptide, no natural source
Sequence: EYVLNTTAR
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 651.0

Epitope: PATE2
Chemical type: Peptide, no natural source
Sequence: FLKHKQSCA
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 51.0

Epitope: PATE2
Chemical type: Peptide, no natural source
Sequence: FLKHKQSCAV
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 21.0

Epitope: NIN
Chemical type: Peptide, no natural source
Sequence: FLQEETLTQM
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 1.1

Epitope: MPDZ
Chemical type: Peptide, no natural source
Sequence: FSIVGGYGR
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 2.6

Epitope: COL5A3
Chemical type: Peptide, no natural source
Sequence: FTAGGEPCLY
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 153.0

Epitope: COL5A3
Chemical type: Peptide, no natural source
Sequence: FTAGGEPCLY
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 11.0

Epitope: JTB
Chemical type: Peptide, no natural source
Sequence: GLLCAFTLK
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 62.0

Epitope: PATE2
Chemical type: Peptide, no natural source
Sequence: GVMTSCFLK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 29.0

Epitope: JTB
Chemical type: Peptide, no natural source
Sequence: HLCGLLCAF
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 125.0

Epitope: KDM5D
Chemical type: Peptide, no natural source
Sequence: HSIPLRQSVK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 45.0

Epitope: C16orf57
Chemical type: Peptide, no natural source
Sequence: HVRCKSGNKF
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 803.0

Epitope: ACSM2A
Chemical type: Peptide, no natural source
Sequence: ILCSLMEHWA
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1651.0

Epitope: F2R
Chemical type: Peptide, no natural source
Sequence: ILLMTVTSI
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 11.0

Epitope: GDF2
Chemical type: Peptide, no natural source
Sequence: ILYKDDMGV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 567.0

Epitope: LOXL2
Chemical type: Peptide, no natural source
Sequence: IPGFKFDNL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 809.0

Epitope: STRAP
Chemical type: Peptide, no natural source
Sequence: ISACKDGKR
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 6671.0

Epitope: TBC1D25
Chemical type: Peptide, no natural source
Sequence: ISYLGRDRLR
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 556.0

Epitope: ZNF182
Chemical type: Peptide, no natural source
Sequence: ITHTGEKPY
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 92.0

Epitope: ZNF182
Chemical type: Peptide, no natural source
Sequence: ITHTGEKPYK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 40.0

Epitope: ZNF330
Chemical type: Peptide, no natural source
Sequence: KAFFCDDHTR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 102.0

Epitope: ZNF253
Chemical type: Peptide, no natural source
Sequence: KFSNSNIYK
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 273.0

Epitope: OR13C5
Chemical type: Peptide, no natural source
Sequence: KISSLEGRSK
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 257.0

Epitope: TLK2
Chemical type: Peptide, no natural source
Sequence: KLTDFGLSK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 41.0

Epitope: TBC1D9B
Chemical type: Peptide, no natural source
Sequence: KMTFLFPNL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 62.0

Epitope: RNF150
Chemical type: Peptide, no natural source
Sequence: KPAVSSDSDI
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 8085.0

Epitope: STRAP
Chemical type: Peptide, no natural source
Sequence: LISACKDGKR
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 15845.0

Epitope: ELK3
Chemical type: Peptide, no natural source
Sequence: LLLQDSECKA
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 5074.0

Epitope: WHSC1L
Chemical type: Peptide, no natural source
Sequence: LLNEVQASK
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 7440.0

Epitope: C16orf57
Chemical type: Peptide, no natural source
Sequence: LLRVHTEHV
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 28.0

Epitope: C16orf57
Chemical type: Peptide, no natural source
Sequence: LLRVHTEHV
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 175.0

Epitope: ACSM2A
Chemical type: Peptide, no natural source
Sequence: LMEHWALGA
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 968.0

Epitope: LRRC41
Chemical type: Peptide, no natural source
Sequence: LPDPILQSI
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1056.0

Epitope: LRRC41
Chemical type: Peptide, no natural source
Sequence: LPDPILQSIL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 855.0

Epitope: OR13C5
Chemical type: Peptide, no natural source
Sequence: LSIFKISSL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 158.0

Epitope: OR13C5
Chemical type: Peptide, no natural source
Sequence: LSIFKISSL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 368.0

Epitope: TLK2
Chemical type: Peptide, no natural source
Sequence: LTDFGLSKIM
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1897.0

Epitope: IREB2
Chemical type: Peptide, no natural source
Sequence: LTRGTFANIK
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 739.0

Epitope: THOC6
Chemical type: Peptide, no natural source
Sequence: LWCRQPPYR
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 915.0

Epitope: POLR2A
Chemical type: Peptide, no natural source
Sequence: MIWNVQKIF
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 541.0

Epitope: SYT15
Chemical type: Peptide, no natural source
Sequence: MLIKPKELV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1442.0

Epitope: C6orf89
Chemical type: Peptide, no natural source
Sequence: MPIEPGDIGC
Assay category: TCell
Result: Positive
Host: M 51
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: C6orf89
Chemical type: Peptide, no natural source
Sequence: MPIEPGDIGC
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 131.0

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: NIQARAVVM
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 743.0

Epitope: HMGN2
Chemical type: Peptide, no natural source
Sequence: NSAENGDAK
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 141.0

Epitope: TP53
Chemical type: Peptide, no natural source
Sequence: NTFRHRVVV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1789.0

Epitope: CDC25A
Chemical type: Peptide, no natural source
Sequence: QSYCEPSSY
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 50000.0

Epitope: CDC25A
Chemical type: Peptide, no natural source
Sequence: QSYCEPSSYR
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 1.5

Epitope: CDC25A
Chemical type: Peptide, no natural source
Sequence: QSYCEPSSYR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 53.0

Epitope: PPP2R2C
Chemical type: Peptide, no natural source
Sequence: QTHEPEFDY
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 26184.0

Epitope: TBC1D25
Chemical type: Peptide, no natural source
Sequence: RLRQEVYLSL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1084.0

Epitope: TBC1D25
Chemical type: Peptide, no natural source
Sequence: RLRQEVYLSL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 114.0

Epitope: MAPK14
Chemical type: Peptide, no natural source
Sequence: RPTFYRQGL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 76.0

Epitope: F2R
Chemical type: Peptide, no natural source
Sequence: SILLMTVTSI
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 929.0

Epitope: GDF2
Chemical type: Peptide, no natural source
Sequence: SILYKDDMGV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1775.0

Epitope: ACSM2A
Chemical type: Peptide, no natural source
Sequence: SLMEHWALG
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 17.0

Epitope: ACSM2A
Chemical type: Peptide, no natural source
Sequence: SLMEHWALGA
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 40.0

Epitope: MYD88
Chemical type: Peptide, no natural source
Sequence: SLSLGAHQK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 30.0

Epitope: KIAA0467
Chemical type: Peptide, no natural source
Sequence: SQPGPSWGL
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 6511.0

Epitope: DSCAML1
Chemical type: Peptide, no natural source
Sequence: SSIRSFVLQY
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 9195.0

Epitope: CDC25A
Chemical type: Peptide, no natural source
Sequence: SYCEPSSYR
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 14.0

Epitope: CDC25A
Chemical type: Peptide, no natural source
Sequence: SYCEPSSYR
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 812.0

Epitope: THNSL2
Chemical type: Peptide, no natural source
Sequence: TIESVQGAK
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 953.0

Epitope: ALMS1
Chemical type: Peptide, no natural source
Sequence: TPTVPSSSF
Assay category: TCell
Result: Positive-Low
Host: M 51
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ALMS1
Chemical type: Peptide, no natural source
Sequence: TPTVPSSSF
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 91.0

Epitope: F2R
Chemical type: Peptide, no natural source
Sequence: TSIDRFLAV
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 130.0

Epitope: MUC2
Chemical type: Peptide, no natural source
Sequence: TTAPITTTT
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 118.0

Epitope: ALMS1
Chemical type: Peptide, no natural source
Sequence: TVPSSSFSHR
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 11.0

Epitope: ALMS1
Chemical type: Peptide, no natural source
Sequence: TVPSSSFSHR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 237.0

Epitope: C16orf57
Chemical type: Peptide, no natural source
Sequence: VLLRVHTEHV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1252.0

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VMSWAPPVGL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 378.0

Epitope: GDF2
Chemical type: Peptide, no natural source
Sequence: VPTKLSPISI
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 3416.0

Epitope: POLR2A
Chemical type: Peptide, no natural source
Sequence: VQKIFHINPR
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 17699.0

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Positive
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Positive
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Positive
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Positive
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Positive
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B
Chemical type: Peptide, no natural source
Sequence: VVMSWAPPV
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 6.4

Epitope: RALGAP
Chemical type: Peptide, no natural source
Sequence: WIMVLVLPK
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 218.0

Epitope: CRYBA1
Chemical type: Peptide, no natural source
Sequence: WVCYQYSGYR
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 972.0

Epitope: C22orf28
Chemical type: Peptide, no natural source
Sequence: WVNCSSMTFL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 274.0

Epitope: CUL1
Chemical type: Peptide, no natural source
Sequence: YMKKAEAPL
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 34841.0

Epitope: CUL1
Chemical type: Peptide, no natural source
Sequence: YMKKAEAPL
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 7927.0

Epitope: CUL1
Chemical type: Peptide, no natural source
Sequence: YMKKAEAPLL
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 138.0

Epitope: CRYBA1
Chemical type: Peptide, no natural source
Sequence: YQYSGYRGY
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 9851.0

Epitope: C6ORF89 wt
Chemical type: Peptide from protein
Sequence: MPIEPGDIGY
Position: 316-325
Source molecule (GenBank): 47271471
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 1.7

Epitope: AMLS1 wt
Chemical type: Peptide from protein
Sequence: TPTVPSGSF
Position: 996-1004
Source molecule (GenBank): CAD10391.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 666.0

Epitope: FNDC3B wt
Chemical type: Peptide from protein
Sequence: VVLSWAPPV
Position: 44-52
Source molecule (GenBank): XP_016862552.1
Assay category: TCell
Result: Negative
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B wt
Chemical type: Peptide from protein
Sequence: VVLSWAPPV
Position: 44-52
Source molecule (GenBank): XP_016862552.1
Assay category: TCell
Result: Negative
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B wt
Chemical type: Peptide from protein
Sequence: VVLSWAPPV
Position: 44-52
Source molecule (GenBank): XP_016862552.1
Assay category: TCell
Result: Negative
Host: M 72
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FNDC3B wt
Chemical type: Peptide from protein
Sequence: VVLSWAPPV
Position: 44-52
Source molecule (GenBank): XP_016862552.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 2.5