LiteFold/IEDB huggingface dataset:
Reference: Zhimin Wan; Jianqiang Ye; Jianjun Sang; Hongxia Shao; Kun Qian; Wenjie Jin; Aijian Qin; Hongquan Wan. "Identification of amino acids in H9N2 influenza virus neuraminidase that are critical for the binding of two mouse monoclonal antibodies." Veterinary microbiology (2016).

Epitope: mAb 1G8
Chemical type: Discontinuous protein residues
Discontinuous residues: D198, K199
Source molecule (GenBank): P06820.2
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 1G8
Chemical type: Discontinuous protein residues
Discontinuous residues: D198, K199
Source molecule (GenBank): P06820.2
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 1D1
Chemical type: Discontinuous protein residues
Discontinuous residues: R338
Source molecule (GenBank): P06820.2
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 1D1
Chemical type: Discontinuous protein residues
Discontinuous residues: R338
Source molecule (GenBank): P06820.2
Assay category: BCell
Result: Positive
Host:  6 weeks
Reference: Li Wang; Xiangying Deng; Haican Liu; Lanhua Zhao; Xiaolong You; Pei Dai; Kanglin Wan; Yanhua Zeng. "The mimic epitopes of Mycobacterium tuberculosis screened by phage display peptide library have serodiagnostic potential for tuberculosis." Pathogens and disease (2016).

Epitope: P2
Chemical type: Peptide, no natural source
Sequence: SVCVGMKPSPRH
Assay category: BCell
Result: Positive

Epitope: P3
Chemical type: Peptide, no natural source
Sequence: YVSVGMKPSPRP
Assay category: BCell
Result: Positive

Epitope: CS2
Chemical type: Peptide, no natural source
Sequence: TMGFTAPRFPHY
Assay category: BCell
Result: Positive-High

Epitope: CS2
Chemical type: Peptide, no natural source
Sequence: TMGFTAPRFPHY
Assay category: BCell
Result: Positive-Low

Epitope: CS2
Chemical type: Peptide, no natural source
Sequence: TMGFTAPRFPHY
Assay category: BCell
Result: Positive-High

Epitope: CS2
Chemical type: Peptide, no natural source
Sequence: TMGFTAPRFPHY
Assay category: BCell
Result: Positive-Low

Epitope: P5
Chemical type: Peptide, no natural source
Sequence: SMGFTAPRFPHY
Assay category: BCell
Result: Positive

Epitope: P6
Chemical type: Peptide, no natural source
Sequence: SMGLGVPRFPHH
Assay category: BCell
Result: Positive

Epitope: P7
Chemical type: Peptide, no natural source
Sequence: SVGLGTKRIPHH
Assay category: BCell
Result: Positive
Reference: Michiel C van Aalderen; Ester B M Remmerswaal; Kirstin M Heutinck; Anja Ten Brinke; Mariet C W Feltkamp; Neelke C van der Weerd; Karlijn A M I van der Pant; Frederike J Bemelman; René A W van Lier; Ineke J M Ten Berge. "Clinically Relevant Reactivation of Polyomavirus BK (BKPyV) in HLA-A02-Positive Renal Transplant Recipients Is Associated with Impaired Effector-Memory Differentiation of BKPyV-Specific CD8+ T Cells." PLoS pathogens (2016).

Epitope: LTAg p579
Chemical type: Peptide from protein
Sequence: LLLIWFRPV
Position: 579-587
Source molecule (GenBank): P03071.1
Assay category: TCell
Result: Positive-Low
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LTAg p579
Chemical type: Peptide from protein
Sequence: LLLIWFRPV
Position: 579-587
Source molecule (GenBank): P03071.1
Assay category: TCell
Result: Positive-Low
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LTAg p579
Chemical type: Peptide from protein
Sequence: LLLIWFRPV
Position: 579-587
Source molecule (GenBank): P03071.1
Assay category: TCell
Result: Positive-Low
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LTAg p579
Chemical type: Peptide from protein
Sequence: LLLIWFRPV
Position: 579-587
Source molecule (GenBank): P03071.1
Assay category: TCell
Result: Positive-Low
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LTAg p579
Chemical type: Peptide from protein
Sequence: LLLIWFRPV
Position: 579-587
Source molecule (GenBank): P03071.1
Assay category: TCell
Result: Positive
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VP1 p44
Chemical type: Peptide from protein
Sequence: AITEVECFL
Position: 44-52
Source molecule (GenBank): BAF93325.1
Assay category: TCell
Result: Positive
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VP1 p108
Chemical type: Peptide from protein
Sequence: LLMWEAVTV
Position: 108-116
Source molecule (GenBank): BAF93325.1
Assay category: TCell
Result: Positive
Host:  47-66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Lexus R Johnson; Orr-El Weizman; Moritz Rapp; Sing Sing Way; Joseph C Sun. "Epitope-Specific Vaccination Limits Clonal Expansion of Heterologous Naive T Cells during Viral Challenge." Cell reports (2016).

Epitope: M38
Chemical type: Peptide from protein
Sequence: SSPPMFRV
Position: 316-323
Source molecule (GenBank): CAP08084.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M38
Chemical type: Peptide from protein
Sequence: SSPPMFRV
Position: 316-323
Source molecule (GenBank): CAP08084.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M38
Chemical type: Peptide from protein
Sequence: SSPPMFRV
Position: 316-323
Source molecule (GenBank): CAP08084.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M45
Chemical type: Peptide from protein
Sequence: HGIRNASFI
Position: 985-993
Source molecule (GenBank): ABI94733.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M45
Chemical type: Peptide from protein
Sequence: HGIRNASFI
Position: 985-993
Source molecule (GenBank): ABI94733.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M45
Chemical type: Peptide from protein
Sequence: HGIRNASFI
Position: 985-993
Source molecule (GenBank): ABI94733.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M45
Chemical type: Peptide from protein
Sequence: HGIRNASFI
Position: 985-993
Source molecule (GenBank): ABI94733.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Ova
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 258-265
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Ova
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 258-265
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: fMIGWII
Chemical type: Peptide from protein
Sequence: MIGWII
Position: 1-6
Source molecule (GenBank): Q8Y8E2.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Jin Hong Kim; Dong Hyun Song; Suk-Jun Youn; Ji Won Kim; Geunyoung Cho; Sun Chang Kim; Hayyoung Lee; Mi Sun Jin; Jie-Oh Lee. "Crystal structures of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface." Scientific reports (2016).

Epitope: Epitope of diabody 4937 on maltose-binding protein
Chemical type: Discontinuous protein residues
Discontinuous residues: G42, D43, D70, W91, D94, R95, E140, N179, E182, Y184, F185, D238, Y239, S240, E243, W259, S262, N263, T266, M359, W369
Source molecule (GenBank): WP_052916395.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.96

Epitope: Epitope of bi-specific diabody 6683 on TLR3
Chemical type: Discontinuous protein residues
Discontinuous residues: K89, S115, D116, K117, A120, F121, K139, N140, N141, V144, K145, K163, T166, Q167, V168, S188, E189, D192, I193
Source molecule (GenBank): O15455.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.28
Reference: Xiaobo Meng; Peyman Ezzati; Irene Smolik; Charles N Bernstein; Carol Ann Hitchon; Hani S El-Gabalawy. "Characterization of Autoantigens Targeted by Anti-Citrullinated Protein Antibodies In Vivo: Prominent Role for Epitopes Derived from Histone 4 Proteins." PloS one (2016).

Epitope: His 1-13 Cit3
Chemical type: Peptide from protein
Sequence: MSGRGKGGKGLGK
Position: 1-13
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 12-24 Cit17
Chemical type: Peptide from protein
Sequence: GKGGAKRHRKVLR
Position: 12-24
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 14-26 Cit19
Chemical type: Peptide from protein
Sequence: GGAKRHRKVLRDN
Position: 14-26
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 14-26 Cit19
Chemical type: Peptide from protein
Sequence: GGAKRHRKVLRDN
Position: 14-26
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive

Epitope: His 14-26 Cit19
Chemical type: Peptide from protein
Sequence: GGAKRHRKVLRDN
Position: 14-26
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 34-48 Cit39
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive

Epitope: His 34-48 Cit39
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 34-48 Cit40
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 34-48 Cit40
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive

Epitope: His 34-48 Cit39-40
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive

Epitope: His 34-48 Cit39-40
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive

Epitope: His 34-48 Cit39-40
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 90-102 Cit95
Chemical type: Peptide from protein
Sequence: ALKRQGRTLYGFG
Position: 90-102
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive

Epitope: His 34-48 PC
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Positive-Low

Epitope: His 34-48 PC
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative

Epitope: His 34-48 PC
Chemical type: Peptide from protein
Sequence: AIRRLARRGGVKRIS
Position: 34-48
Source molecule (GenBank): P02304
Assay category: BCell
Result: Negative
Reference: Jorie Buijs; Djuna L Cahen; Marianne J van Heerde; Bettina E Hansen; Henk R van Buuren; Maikel P Peppelenbosch; Gwenny M Fuhler; Marco J Bruno. "Testing for Anti-PBP Antibody Is Not Useful in Diagnosing Autoimmune Pancreatitis." The American journal of gastroenterology (2016).

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive
Host:  56-72 years

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive
Host:  61-70 years

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive
Host:  49-62 years

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive
Host:  39-54 years

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive
Host:  59-65 years

Epitope: PBP (298-304)
Chemical type: Peptide from protein
Sequence: AKEERRY
Position: 298-304
Source molecule (GenBank): O25249.1
Assay category: BCell
Result: Positive
Host:  59-65 years
Reference: Lucia Pulzova; Zuzana Flachbartova; Elena Bencurova; Lenka Potocnakova; Lubos Comor; Eva Schreterova; Mangesh Bhide. "Identification of B-cell epitopes of Borrelia burgdorferi outer surface protein C by screening a phage-displayed gene fragment library." Microbiology and immunology (2016).

Epitope: OspC E1 (19-27)
Chemical type: Peptide from protein
Sequence: CNNSGKDGN
Position: 19-27
Source molecule (GenBank): Q07337.1
Assay category: BCell
Result: Positive

Epitope: OspC E2 (38-53)
Chemical type: Peptide from protein
Sequence: KGPNLVEISKKITDSN
Position: 38-53
Source molecule (GenBank): CAA57244.1
Assay category: BCell
Result: Positive

Epitope: OspC E4 (155-163)
Chemical type: Peptide from protein
Sequence: AKKAILKTH
Position: 155-163
Source molecule (GenBank): CAA57244.1
Assay category: BCell
Result: Positive

Epitope: OspC E5 (184-190)
Chemical type: Peptide from protein
Sequence: LKAAKEM
Position: 184-190
Source molecule (GenBank): CAA57244.1
Assay category: BCell
Result: Positive

Epitope: OspC E6 (201-207)
Chemical type: Peptide from protein
Sequence: PVVAESP
Position: 201-207
Source molecule (GenBank): CAA57244.1
Assay category: BCell
Result: Positive
Reference: Paul Spearman; Mark Mulligan; Evan J Anderson; Andi L Shane; Kathy Stephens; Theda Gibson; Brooke Hartwell; Drew Hannaman; Nora L Watson; Karnail Singh. "A phase 1, randomized, controlled dose-escalation study of EP-1300 polyepitope DNA vaccine against Plasmodium falciparum malaria administered via electroporation." Vaccine (2016).

Epitope: SP 2 (527-541)
Chemical type: Peptide from protein
Sequence: GLAYKFVVPGAATPY
Position: 527-541
Source molecule (GenBank): AAA29767.1
Assay category: TCell
Result: Negative
Host:  18-40 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PADRE
Chemical type: Peptide, no natural source
Sequence: AKFVAAWTLKAAA
Assay category: TCell
Result: Negative
Host:  18-40 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EXP-1 (71-85)
Chemical type: Peptide from protein
Sequence: KSKYKLATSVLAGLL
Position: 71-85
Source molecule (GenBank): AAR02445.1
Assay category: TCell
Result: Negative
Host:  18-40 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LSA-1 (16-30)
Chemical type: Peptide from protein
Sequence: LLIFHINGKIIKNSE
Position: 16-30
Source molecule (GenBank): AAB04062.1
Assay category: TCell
Result: Negative
Host:  18-40 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CSP
Chemical type: Peptide from protein
Sequence: NANPNVDPNANP
Position: 124-135
Source molecule (GenBank): Q27325.1
Assay category: BCell
Result: Negative
Host:  18-40 years
Reference: Armando Navarro; Ulises Hernández-Chiñas; Delia Licona-Moreno; Edgar Zenteno; Alejandro Cravioto; Carlos A Eslava-Campos. "Immunogenic peptide mimotopes from an epitope of Escherichia coli O157 LPS." The Biochemical journal (2016).

Epitope: SP12
Chemical type: Peptide, no natural source
Sequence: SLSPPLSGLGRA
Assay category: BCell
Result: Positive

Epitope: SP12
Chemical type: Peptide, no natural source
Sequence: SLSPPLSGLGRA
Assay category: BCell
Result: Negative

Epitope: SP12
Chemical type: Peptide, no natural source
Sequence: SLSPPLSGLGRA
Assay category: BCell
Result: Positive

Epitope: SP12
Chemical type: Peptide, no natural source
Sequence: SLSPPLSGLGRA
Assay category: BCell
Result: Positive

Epitope: SP12
Chemical type: Peptide, no natural source
Sequence: SLSPPLSGLGRA
Assay category: BCell
Result: Positive-High

Epitope: SP12
Chemical type: Peptide, no natural source
Sequence: SLSPPLSGLGRA
Assay category: BCell
Result: Positive

Epitope: SP5
Chemical type: Peptide, no natural source
Sequence: HLWPSLITAPLW
Assay category: BCell
Result: Positive

Epitope: SP5
Chemical type: Peptide, no natural source
Sequence: HLWPSLITAPLW
Assay category: BCell
Result: Positive

Epitope: SP5
Chemical type: Peptide, no natural source
Sequence: HLWPSLITAPLW
Assay category: BCell
Result: Positive

Epitope: SP16
Chemical type: Peptide, no natural source
Sequence: QNIHNRLPPLWS
Assay category: BCell
Result: Positive

Epitope: SP16
Chemical type: Peptide, no natural source
Sequence: QNIHNRLPPLWS
Assay category: BCell
Result: Positive

Epitope: SP16
Chemical type: Peptide, no natural source
Sequence: QNIHNRLPPLWS
Assay category: BCell
Result: Positive

Epitope: SP11
Chemical type: Peptide, no natural source
Sequence: SLPYKTQPTRFP
Assay category: BCell
Result: Negative

Epitope: SP11
Chemical type: Peptide, no natural source
Sequence: SLPYKTQPTRFP
Assay category: BCell
Result: Positive

Epitope: SP11
Chemical type: Peptide, no natural source
Sequence: SLPYKTQPTRFP
Assay category: BCell
Result: Positive

Epitope: FgtpPre/3
Chemical type: Peptide, no natural source
Sequence: HTWSFSNALFGG
Assay category: BCell
Result: Negative

Epitope: FgtpPre/3
Chemical type: Peptide, no natural source
Sequence: HTWSFSNALFGG
Assay category: BCell
Result: Positive
Reference: Stephanie Gras; Ildiko Van Rhijn; Adam Shahine; Tan-Yun Cheng; Mugdha Bhati; Li Lynn Tan; Hanim Halim; Kathryn D Tuttle; Laurent Gapin; Jérôme Le Nours; D Branch Moody; Jamie Rossjohn. "T cell receptor recognition of CD1b presenting a mycobacterial glycolipid." Nature communications (2016).

Epitope: GMM (C36)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 3.2
Host: M 56 years

Epitope: GMM (C36)
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.65

Epitope: GMM (C36)
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 3.2

Epitope: Glucose monomycolate (GMM C80)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: Glycerol monomycolate (C80)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive-Low
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: mycolic acid
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: GMM (C32)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 700.0
Host: M 56 years

Epitope: GMM (C32)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 1150.0
Host: M 56 years

Epitope: GMM (C32)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GMM (C32)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: GMM (C32)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: GMM (C32)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Meytal Galilee; Elena Britan-Rosich; Sarah L Griner; Serdar Uysal; Viola Baumgärtel; Don C Lamb; Anthony A Kossiakoff; Moshe Kotler; Robert M Stroud; Ailie Marx; Akram Alian. "The Preserved HTH-Docking Cleft of HIV-1 Integrase Is Functionally Critical." Structure (London, England : 1993) (2016).

Epitope: Epitope of Fab2 on HIV-1 integrase
Chemical type: Discontinuous protein residues
Discontinuous residues: L1215, E1216, K1303, E1304, K1306, K1307, I1308, I1309, G1310, Q1311, V1312, R1313, L1319, F1328, I1329, K1333, R1334, K1335, G1336, G1337
Source molecule (GenBank): P04585.4
Assay category: BCell
Result: Positive
Quantitative measurement: 2.64

Epitope: Epitope of Fab2 on HIV-1 integrase
Chemical type: Discontinuous protein residues
Discontinuous residues: L1215, E1216, K1303, E1304, K1306, K1307, I1308, I1309, G1310, Q1311, V1312, R1313, L1319, F1328, I1329, K1333, R1334, K1335, G1336, G1337
Source molecule (GenBank): P04585.4
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab2 on HIV-1 integrase
Chemical type: Discontinuous protein residues
Discontinuous residues: L1215, E1216, K1303, E1304, K1306, K1307, I1308, I1309, G1310, Q1311, V1312, R1313, L1319, F1328, I1329, K1333, R1334, K1335, G1336, G1337
Source molecule (GenBank): P04585.4
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab2 on HIV-1 integrase
Chemical type: Discontinuous protein residues
Discontinuous residues: L1215, E1216, K1303, E1304, K1306, K1307, I1308, I1309, G1310, Q1311, V1312, R1313, L1319, F1328, I1329, K1333, R1334, K1335, G1336, G1337
Source molecule (GenBank): P04585.4
Assay category: BCell
Result: Positive
Reference: Kefang Liu; Shuguang Tan; Yan Chai; Danqing Chen; Hao Song; Catherine Wei-Hong Zhang; Yi Shi; Jun Liu; Wenjie Tan; Jianxin Lyu; Shan Gao; Jinghua Yan; Jianxun Qi; George F Gao. "Structural basis of anti-PD-L1 monoclonal antibody avelumab for tumor therapy." Cell research (2017).

Epitope: Epitope of avelumab on PD-L1
Chemical type: Discontinuous protein residues
Discontinuous residues: I54, Y56, E58, M59, E60, D61, K62, N63, Q66, H69, D73, K75, V76, H78, R113, M115, S117, A121, Y123, R125
Source molecule (GenBank): Q9NZQ7.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0421

Epitope: Epitope of avelumab on PD-L1
Chemical type: Discontinuous protein residues
Discontinuous residues: I54, Y56, E58, M59, E60, D61, K62, N63, Q66, H69, D73, K75, V76, H78, R113, M115, S117, A121, Y123, R125
Source molecule (GenBank): Q9NZQ7.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.21
Reference: Shoichiro Horita; Yayoi Nomura; Yumi Sato; Tatsuro Shimamura; So Iwata; Norimichi Nomura. "High-resolution crystal structure of the therapeutic antibody pembrolizumab bound to the human PD-1." Scientific reports (2016).

Epitope: Epitope of pembrolizumab Fv on PD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: S60, E61, N66, Y68, Q75, T76, D77, K78, E84, D85, R86, S87, Q88, P89, G90, Q99, L128, K131, A132, I134, E136
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.15
Reference: M J Norris; W Duan; Y Cen; T J Moraes. "Agonistic 4-1BB antibody fails to reduce disease burden during acute respiratory syncytial virus (RSV) infection." Antiviral research (2016).

Epitope: M2 (82-90)
Chemical type: Peptide from protein
Sequence: SYIGSINNI
Position: 82-90
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Direct Ex Vivo