LiteFold/IEDB huggingface dataset:
Reference: S Kozaki; A Miki; Y Kamata; J Ogasawara; G Sakaguchi. "Immunological characterization of papain-induced fragments of Clostridium botulinum type A neurotoxin and interaction of the fragments with brain synaptosomes." Infection and immunity (1989).

Epitope: BONT/A Heavy chain
Chemical type: Peptide from protein
Sequence: ALNDLCIKVNNWDLFFSPSEDNFTNDLNKGEEITSDTNIEAAEENISLDLIQQYYLTFNFDNEPENISIENLSSDIIGQLELMPNIERFPNGKKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEALLNPSRVYTFFSSDYVKKVNKATEAAMFLGWVEQLVYDFTDETSEVSTTDKIADITIIIPYIGPALNIGNMLYKDDFVGALIFSGAVILLEFIPEIAIPVLGTFALVSYIANKVLTVQTIDNALSKRNEKWDEVYKYIVTNWLAKVNTQIDLIRKKMKEALENQAEATKAIINYQYNQYTEEEKNNINFNIDDLSSKLNESINKAMININKFLNQCSVSYLMNSMIPYGVKRLEDFDASLKDALLKYIYDNRGTLIGQVDRLKDKVNNTLSTDIPFQLSKYVDNQRLLSTFTEYIKNIINTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIR
Position: 449-948
Source molecule (GenBank): P10845.4
Assay category: BCell
Result: Positive

Epitope: BONT/A Heavy chain
Chemical type: Peptide from protein
Sequence: ALNDLCIKVNNWDLFFSPSEDNFTNDLNKGEEITSDTNIEAAEENISLDLIQQYYLTFNFDNEPENISIENLSSDIIGQLELMPNIERFPNGKKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEALLNPSRVYTFFSSDYVKKVNKATEAAMFLGWVEQLVYDFTDETSEVSTTDKIADITIIIPYIGPALNIGNMLYKDDFVGALIFSGAVILLEFIPEIAIPVLGTFALVSYIANKVLTVQTIDNALSKRNEKWDEVYKYIVTNWLAKVNTQIDLIRKKMKEALENQAEATKAIINYQYNQYTEEEKNNINFNIDDLSSKLNESINKAMININKFLNQCSVSYLMNSMIPYGVKRLEDFDASLKDALLKYIYDNRGTLIGQVDRLKDKVNNTLSTDIPFQLSKYVDNQRLLSTFTEYIKNIINTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIR
Position: 449-948
Source molecule (GenBank): P10845.4
Assay category: BCell
Result: Positive

Epitope: BONT/A Light chain
Chemical type: Peptide from protein
Sequence: PFVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGIITSKTKSLDKGYNK
Position: 2-448
Source molecule (GenBank): P10845.4
Assay category: BCell
Result: Positive
Reference: H Yamaguchi; T Osaki; M Kai; H Taguchi; S Kamiya. "Immune response against a cross-reactive epitope on the heat shock protein 60 homologue of Helicobacter pylori." Infection and immunity (2000).

Epitope: pH9
Chemical type: Peptide from protein
Sequence: VEGMQFDRGYLSPYF
Position: 189-203
Source molecule (GenBank): AAL86900.1
Assay category: BCell
Result: Positive

Epitope: pH9
Chemical type: Peptide from protein
Sequence: VEGMQFDRGYLSPYF
Position: 189-203
Source molecule (GenBank): AAL86900.1
Assay category: BCell
Result: Positive

Epitope: pH9
Chemical type: Peptide from protein
Sequence: VEGMQFDRGYLSPYF
Position: 189-203
Source molecule (GenBank): AAL86900.1
Assay category: BCell
Result: Positive

Epitope: pH9
Chemical type: Peptide from protein
Sequence: VEGMQFDRGYLSPYF
Position: 189-203
Source molecule (GenBank): AAL86900.1
Assay category: BCell
Result: Positive

Epitope: pH9
Chemical type: Peptide from protein
Sequence: VEGMQFDRGYLSPYF
Position: 189-203
Source molecule (GenBank): AAL86900.1
Assay category: BCell
Result: Positive

Epitope: pH9
Chemical type: Peptide from protein
Sequence: VEGMQFDRGYLSPYF
Position: 189-203
Source molecule (GenBank): AAL86900.1
Assay category: BCell
Result: Positive
Reference: Estelle Leclerc; David Peretz; Haydn Ball; Laura Solforosi; Giuseppe Legname; Jiri Safar; Ana Serban; Stanley B Prusiner; Dennis R Burton; R Anthony Williamson. "Conformation of PrP(C) on the cell surface as probed by antibodies." Journal of molecular biology (2003).

Epitope: E149
Chemical type: Peptide from protein
Sequence: GWGQPHGGGWGQPHG
Position: 64-78
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive

Epitope: E149
Chemical type: Peptide from protein
Sequence: GWGQPHGGGWGQPHG
Position: 64-78
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive

Epitope: 3F4
Chemical type: Peptide from protein
Sequence: MKHM
Position: 109-112
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive

Epitope: 13A5
Chemical type: Peptide from protein
Sequence: MMHF
Position: 138-141
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive
Host: F

Epitope: D13
Chemical type: Peptide from protein
Sequence: HNQWNKPSKP
Position: 96-105
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive

Epitope: D18
Chemical type: Peptide from protein
Sequence: MSRPMMHFGNDWEDRYYRENMNRYP
Position: 134-158
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive

Epitope: 28d
Chemical type: Peptide from protein
Sequence: DWEDRYYRENMNR
Position: 144-156
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive

Epitope: R1
Chemical type: Peptide from protein
Sequence: KESQAYYDGRRS
Position: 220-231
Source molecule (GenBank): P04273.1
Assay category: BCell
Result: Positive
Reference: Carl V Hamby; Marta Llibre; Sandeepa Utpat; Gary P Wormser. "Use of Peptide library screening to detect a previously unknown linear diagnostic epitope: proof of principle by use of lyme disease sera." Clinical and diagnostic laboratory immunology. (2005).

Epitope: Motif A consensus sequence
Chemical type: Peptide, no natural source
Sequence: SKEKPPSLNWPAC
Assay category: BCell
Result: Positive

Epitope: VisE C-terminal peptide
Chemical type: Peptide from protein
Sequence: KAASKETPPALNKC
Position: 344-357
Source molecule (GenBank): CAF34030.1
Assay category: BCell
Result: Positive

Epitope: mutated Motif A
Chemical type: Peptide, no natural source
Sequence: KAASREKGGAVQKC
Assay category: BCell
Result: Positive

Epitope: C<sub>6</sub>
Chemical type: Peptide, no natural source
Sequence: CMKKDDQIAAAMVLRGMAKDGKFALK
Assay category: BCell
Result: Positive

Epitope: 24 (Motif A)
Chemical type: Peptide, no natural source
Sequence: GNNSVSKEKPPSLNWPP
Assay category: BCell
Result: Positive

Epitope: 5 (Motif A)
Chemical type: Peptide, no natural source
Sequence: TELKLAPPVLNAPPL
Assay category: BCell
Result: Positive

Epitope: 11 (Motif A)
Chemical type: Peptide, no natural source
Sequence: YPKESPPRLNAPWYQ
Assay category: BCell
Result: Positive

Epitope: 1 (Motif A)
Chemical type: Peptide, no natural source
Sequence: ESKLTPPPLNPIRVV
Assay category: BCell
Result: Positive

Epitope: 7 (Motif A)
Chemical type: Peptide, no natural source
Sequence: KPRDTLPPPLNRPPP
Assay category: BCell
Result: Positive

Epitope: 4 (Motif A)
Chemical type: Peptide, no natural source
Sequence: KAHPPLLNSPRDVPL
Assay category: BCell
Result: Positive

Epitope: 12 (Motif B)
Chemical type: Peptide, no natural source
Sequence: VPVDAPHAGTKPHSA
Assay category: BCell
Result: Positive

Epitope: 23 (Motif C)
Chemical type: Peptide, no natural source
Sequence: PKSSCTQNPILCAILS
Assay category: BCell
Result: Negative

Epitope: 14 (Motif F)
Chemical type: Peptide, no natural source
Sequence: QKDFACKHCKLPSP
Assay category: BCell
Result: Positive

Epitope: 17 (Motif F)
Chemical type: Peptide, no natural source
Sequence: EKRFACKPLCNTPA
Assay category: BCell
Result: Positive

Epitope: 19 (Motif H)
Chemical type: Peptide, no natural source
Sequence: QRSECSTSKCFVRK
Assay category: BCell
Result: Positive

Epitope: 20 (Motif H)
Chemical type: Peptide, no natural source
Sequence: YREACTNGKCFVLK
Assay category: BCell
Result: Positive
Reference: Bing-Shui Xiu; Shi-Gan Ling; Xiao-Guo Song; He-Qiu Zhang; Kun Chen; Cui-Xia Zhu. "Cross-reactivity of hypervariable region 1 chimera of hepatitis C virus." World journal of gastroenterology : WJG (2003).

Epitope: 1#
Chemical type: Peptide, no natural source
Sequence: STHVTGGAAGRTTSGFTSLFTPGPSQK
Assay category: BCell
Result: Positive

Epitope: 2#
Chemical type: Peptide, no natural source
Sequence: STHVTGGVQGHSLRGLTSLFTSGPAQK
Assay category: BCell
Result: Positive

Epitope: 3#
Chemical type: Peptide, no natural source
Sequence: ITRVTGGVQGHSLRSLTSLFTPGPAQK
Assay category: BCell
Result: Positive

Epitope: 4#
Chemical type: Peptide, no natural source
Sequence: STHVTGAVQGRSLQSFTSFLSPGPSQK
Assay category: BCell
Result: Positive

Epitope: 6#
Chemical type: Peptide, no natural source
Sequence: GTYVTGGATAHTASGFASLFTTGSKQN
Assay category: BCell
Result: Positive

Epitope: 7#
Chemical type: Peptide, no natural source
Sequence: TTHVTAGTAAHATSSFTKLFAPGAKQN
Assay category: BCell
Result: Positive

Epitope: 8#
Chemical type: Peptide, no natural source
Sequence: NTYVTGGSAAHTTSRFTSLFSPGPQQNK
Assay category: BCell
Result: Positive

Epitope: 9#
Chemical type: Peptide, no natural source
Sequence: ETHTSGGSVARAAFGLTSIFSPGKSQN
Assay category: BCell
Result: Positive

Epitope: 10#
Chemical type: Peptide, no natural source
Sequence: TTTTTGGVQGHTTRGLVRLFSLGSKQN
Assay category: BCell
Result: Positive

Epitope: 11#
Chemical type: Peptide, no natural source
Sequence: DTTVTGGQAARTTQSFTSLFPPGPSQK
Assay category: BCell
Result: Positive

Epitope: 12#
Chemical type: Peptide, no natural source
Sequence: DTTVTGGQAARTTQSFTSLFTPGPSQK
Assay category: BCell
Result: Positive
Reference: Mei Peng; Chang-Bai Dai; Yuan-Ding Chen. "Expression and immunoreactivity of an epitope of HCV in a foreign epitope presenting system." World journal of gastroenterology : WJG (2005).

Epitope: E1 315-328
Chemical type: Peptide from protein
Sequence: EGHRMAWDMMMNWS
Assay category: BCell
Result: Positive

Epitope: E1 315-328
Chemical type: Peptide from protein
Sequence: EGHRMAWDMMMNWS
Assay category: BCell
Result: Positive
Reference: X S He; B Rehermann; J Boisvert; J Mumm; H T Maecker; M Roederer; T L Wright; V C Maino; M M Davis; H B Greenberg. "Direct functional analysis of epitope-specific CD8+ T cells in peripheral blood." Viral immunology (2001).

Epitope: HCV NS3-2 1406-1415
Chemical type: Peptide from protein
Sequence: KLVALGINAV
Position: 1406-1415
Source molecule (GenBank): NP_671491.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS3-2 1406-1415
Chemical type: Peptide from protein
Sequence: KLVALGINAV
Position: 1406-1415
Source molecule (GenBank): NP_671491.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 485-493
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 485-493
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV Core-2 (131-140)
Chemical type: Peptide from protein
Sequence: ADLMGYIPLV
Position: 131-140
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Negative
MHC allele types: 235
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV Core-2 (131-140)
Chemical type: Peptide from protein
Sequence: ADLMGYIPLV
Position: 131-140
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS3-2 1401-1415
Chemical type: Peptide from protein
Sequence: DELAAKLVALGINAV
Position: 1401-1415
Source molecule (GenBank): NP_671491.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS3-2 1403-1417
Chemical type: Peptide from protein
Sequence: LAAKLVALGINAVAY
Position: 1403-1417
Source molecule (GenBank): NP_671491.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS3-2 1405-1419
Chemical type: Peptide from protein
Sequence: AKLVALGINAVAYYR
Position: 1405-1419
Source molecule (GenBank): NP_671491.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: J Goto; S Nishimura; M Esumi; K Makizumi; T Rikihisa; T Nishihara; K Mizuno; Y -H. Zhou; T Shikata; S Fujiyama; K Tomita. "Prevention of hepatitis C virus infection in a chimpanzee by vaccination and epitope mapping of antiserum directed against hypervariable region 1." Hepatology research : the official journal of the Japan Society of Hepatology (2001).

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: HTRVTGGVQG
Position: 384-393
Source molecule (GenBank): BAA00452.1
Assay category: BCell
Result: Negative

Epitope: Peptide 2
Chemical type: Peptide from protein
Sequence: HVTSTLTSLF
Position: 394-403
Source molecule (GenBank): BAA00452.1
Assay category: BCell
Result: Negative

Epitope: Peptide 4
Chemical type: Peptide from protein
Sequence: GGVQGHVTST
Position: 389-398
Source molecule (GenBank): BAA00452.1
Assay category: BCell
Result: Negative

Epitope: Peptide 5
Chemical type: Peptide from protein
Sequence: LTSLFRPGAS
Position: 399-408
Source molecule (GenBank): BAA00452.1
Assay category: BCell
Result: Negative
Reference: Georg M Lauer; Michaela Lucas; Joerg Timm; Kei Ouchi; Arthur Y Kim; Cheryl L Day; Julian Schulze Zur Wiesch; Glaucia Paranhos-Baccala; Isabelle Sheridan; Deborah R Casson; Markus Reiser; Rajesh T Gandhi; Bin Li; Todd M Allen; Raymond T Chung; Paul Klenerman; Bruce D Walker. "Full-breadth analysis of CD8+ T-cell responses in acute hepatitis C virus infection and early therapy." Journal of virology (2005).

Epitope: NS3 1435-1443
Chemical type: Peptide from protein
Sequence: ATDALMTGY
Position: 1436-1444
Source molecule (GenBank): BAA01582.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1435-1443
Chemical type: Peptide from protein
Sequence: ATDALMTGY
Position: 1436-1444
Source molecule (GenBank): BAA01582.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1073-1081
Chemical type: Peptide from protein
Sequence: CINGVCWTV
Position: 1073-1081
Source molecule (GenBank): BAA01582.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1073-1081
Chemical type: Peptide from protein
Sequence: CINGVCWTV
Position: 1073-1081
Source molecule (GenBank): BAA01582.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS4 1406-1415
Chemical type: Peptide from protein
Sequence: KLVALGINAV
Position: 1406-1415
Source molecule (GenBank): AAB67037.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS4 1406-1415
Chemical type: Peptide from protein
Sequence: KLVALGINAV
Position: 1406-1415
Source molecule (GenBank): AAB67037.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS5B 2594-2603
Chemical type: Peptide from protein
Sequence: ALYDVVTKL
Position: 2594-2602
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS5B 2594-2603
Chemical type: Peptide from protein
Sequence: ALYDVVTKL
Position: 2594-2602
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: K Kobayashi; M Ishii; M Shiina; Y Ueno; Y Kondo; A Kanno; Y Miyazaki; T Yamamoto; T Kobayashi; H Niitsuma; Y Kikumoto; H Takizawa; T Shimosegawa. "Interferon-gamma is produced by CD8 T cells in response to HLA-A24-restricted hepatitis C virus epitopes after sustained virus loss." Clinical and experimental immunology (2005).

Epitope: NS3.1296-1304
Chemical type: Peptide from protein
Sequence: TYSTYGKFL
Position: 1296-1304
Source molecule (GenBank): Q99IB8.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3.1296-1304
Chemical type: Peptide from protein
Sequence: TYSTYGKFL
Position: 1296-1304
Source molecule (GenBank): Q99IB8.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3.1296-1304
Chemical type: Peptide from protein
Sequence: TYSTYGKFL
Position: 1296-1304
Source molecule (GenBank): Q99IB8.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core.129-137
Chemical type: Peptide from protein
Sequence: GFADLMGYI
Position: 129-137
Source molecule (GenBank): P26663.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Core.129-137
Chemical type: Peptide from protein
Sequence: GFADLMGYI
Position: 129-137
Source molecule (GenBank): P26663.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core.129-137
Chemical type: Peptide from protein
Sequence: GFADLMGYI
Position: 129-137
Source molecule (GenBank): P26663.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: A Sato; N Ida; M Ishikawa; K Tanahashi; H Nakamura; Y Sho; T Arima; T Kunitomo. "A sensitive serodiagnosis of hepatitis C virus (HCV) infection with two non-fused peptides: comparison of antibody responses detected with a newly developed assay and a commercial second-generation test." Microbiology and immunology (1993).

Epitope: HCV capsid S29-1
Chemical type: Peptide from protein
Sequence: MSTNPKPQRKTKRNTSRRPQDVKFPGGGQI
Assay category: BCell
Result: Positive

Epitope: HCV capsid S29-1
Chemical type: Peptide from protein
Sequence: MSTNPKPQRKTKRNTSRRPQDVKFPGGGQI
Assay category: BCell
Result: Positive

Epitope: HCV core T108
Chemical type: Peptide from protein
Sequence: MSTNPKPQKKNKRNTNRRPQDVKFPGGGQI
Position: 1-30
Source molecule (GenBank): AAA45676.1
Assay category: BCell
Result: Positive

Epitope: HCV core T109
Chemical type: Peptide from protein
Sequence: MSTNPKPQRKTKRNTNRRPQDVKFPGGGQI
Position: 1-30
Source molecule (GenBank): P90247
Assay category: BCell
Result: Positive
Reference: Maria Kantzanou; Michaela Lucas; Eleanor Barnes; Harvki Komatsu; Geoff Dusheiko; Scott Ward; Gillian Harcourt; Paul Klenerman. "Viral escape and T cell exhaustion in hepatitis C virus infection analysed using Class I peptide tetramers." Immunology letters (2003).

Epitope: NS3.1073-1081
Chemical type: Peptide from protein
Sequence: CINGCVWTV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3.1073-1081
Chemical type: Peptide from protein
Sequence: CINGCVWTV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: G C Harcourt; M Lucas; A J Godkin; M Kantzanou; R E Phillips; P Klenerman. "Evidence for lack of cross-genotype protection of CD4+ T cell responses during chronic hepatitis C virus infection." Clinical and experimental immunology (2003).

Epitope: NS4-8.1a
Chemical type: Peptide from protein
Sequence: VVLSGKPAIIPDREVLYREF
Position: 1686-1705
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS4-8.1a
Chemical type: Peptide from protein
Sequence: VVLSGKPAIIPDREVLYREF
Position: 1686-1705
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS4-14.1a
Chemical type: Peptide from protein
Sequence: IAPAVQTNWQKLETFWAKHM
Position: 1746-1765
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS4-14.1a
Chemical type: Peptide from protein
Sequence: IAPAVQTNWQKLETFWAKHM
Position: 1746-1765
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS4-14.3a
Chemical type: Peptide from protein
Sequence: IEPIVATNWQKLEAFWHKHM
Position: 1752-1771
Source molecule (GenBank): AAC03058.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Lee L Lam; Chou-Pong Pau; Sheila C Dollard; Philip E Pellett; Thomas J Spira. "Highly sensitive assay for human herpesvirus 8 antibodies that uses a multiple antigenic peptide derived from open reading frame K8.1." Journal of clinical microbiology (2002).

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: HANCPTYRSHLGFWQEGWSG
Position: 25-44
Source molecule (GenBank): ABD28902.1
Assay category: BCell
Result: Negative

Epitope: Peptide 4
Chemical type: Peptide from protein
Sequence: LNGTRLAAGSPSSEYPNVSV
Position: 69-88
Source molecule (GenBank): ABD28902.1
Assay category: BCell
Result: Negative

Epitope: Peptide 5
Chemical type: Peptide from protein
Sequence: YPNVSVSVEDTSASGSGEDAID
Position: 83-104
Source molecule (GenBank): ABD28902.1
Assay category: BCell
Result: Negative

Epitope: Peptide 6
Chemical type: Peptide from protein
Sequence: GEDAIDESGSGEEERPVTSHVT
Position: 99-120
Source molecule (GenBank): ABD28902.1
Assay category: BCell
Result: Negative

Epitope: Peptide 7
Chemical type: Peptide from protein
Sequence: VTSHVTFMTQSVQATTELTD
Position: 115-134
Source molecule (GenBank): ABD28902.1
Assay category: BCell
Result: Negative

Epitope: Peptide 8
Chemical type: Peptide from protein
Sequence: TTELTDALISAFSGSYSSGE
Position: 129-148
Source molecule (GenBank): AAC59622.1
Assay category: BCell
Result: Negative

Epitope: Peptide 9
Chemical type: Peptide from protein
Sequence: GSYSSGEPSRTTRIRVSPVA
Position: 142-161
Source molecule (GenBank): AAC59622.1
Assay category: BCell
Result: Negative

Epitope: Peptide 10
Chemical type: Peptide from protein
Sequence: RIRVSPVAENGRNSGASNRV
Position: 154-173
Source molecule (GenBank): AAC59622.1
Assay category: BCell
Result: Negative

Epitope: Peptide 12
Chemical type: Peptide from protein
Sequence: TTTTTRGRDAHYNAEIRTHL
Position: 178-197
Source molecule (GenBank): AAC59622.1
Assay category: BCell
Result: Negative
Reference: A Gigler; S Dorsch; A Hemauer; C Williams; S Kim; N S Young; S Zolla-Pazner; H Wolf; M K Gorny; S Modrow. "Generation of neutralizing human monoclonal antibodies against parvovirus B19 proteins." Journal of virology (1999).

Epitope: NS1 511-528
Chemical type: Peptide from protein
Sequence: GGESSEELSESSFFNLIT
Position: 513-530
Source molecule (GenBank): P07298.1
Assay category: BCell
Result: Positive

Epitope: NS1 511-528
Chemical type: Peptide from protein
Sequence: GGESSEELSESSFFNLIT
Position: 513-530
Source molecule (GenBank): P07298.1
Assay category: BCell
Result: Positive
Reference: L H Tobler; M P Busch; J Wilber; R Dinello; S Quan; A Polito; R Kochesky; C Bahl; M Nelles; S R Lee. "Evaluation of indeterminate c22-3 reactivity in volunteer blood donors." Transfusion (1994).

Epitope: Peptide 0
Chemical type: Peptide from protein
Sequence: MSTNPKPQKKNKRNT
Position: 1-15
Source molecule (GenBank): AAA45676.1
Assay category: BCell
Result: Positive

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: KNKRNTNRRPQDVKF
Position: 10-24
Source molecule (GenBank): P26664.3
Assay category: BCell
Result: Positive

Epitope: Peptide 2
Chemical type: Peptide from protein
Sequence: QDVKFPGGGQIVGGV
Position: 20-34
Source molecule (GenBank): P26664.3
Assay category: BCell
Result: Positive

Epitope: Peptide 4
Chemical type: Peptide from protein
Sequence: RRGPRLGVRATRKTS
Position: 39-53
Source molecule (GenBank): P26664.3
Assay category: BCell
Result: Positive
Reference: I Nakano; Y Fukuda; Y Katano; T Hayakawa. "Conformational epitopes detected by cross-reactive antibodies to envelope 2 glycoprotein of the hepatitis C virus." The Journal of infectious diseases (1999).

Chemical type: Discontinuous protein residues
Discontinuous residues: N423, N430, N448, N576
Source molecule (GenBank): P27958.3
Assay category: BCell
Result: Positive