Reference: Miguel Marcilla; Juan J Cragnolini; José A López de Castro. "Proteasome-independent HLA-B27 ligands arise mainly from small basic proteins." Molecular & cellular proteomics : MCP (2007).

Epitope: Solute carrier family 25 member 46 (98-107)
Chemical type: Peptide from protein
Sequence: NRFAGFGIGL
Position: 98-107
Source molecule (GenBank): Q96AG3.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Nuclear pore membrane glycoprotein 210 (1231-1239)
Chemical type: Peptide from protein
Sequence: IRLPSQYNF
Position: 1231-1239
Source molecule (GenBank): Q8TEM1.3
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B27 (193-203)
Chemical type: Peptide from protein
Sequence: RRYLENGKETL
Position: 193-203
Source molecule (GenBank): P03989.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Phorbol-12-myristate-13-acetate-induced protein 1 (30-38)
Chemical type: Peptide from protein
Sequence: RRFGDKLNF
Position: 30-38
Source molecule (GenBank): Q13794.1
Assay category: MhcLigandElution
Result: Positive

Epitope: phospholipase C-alpha (4-13)
Chemical type: Peptide from protein
Sequence: RRLALFPGVA
Position: 4-13
Source molecule (GenBank): P30101.4
Assay category: MhcLigandElution
Result: Positive

Epitope: NADH dehydrogenase (52-61)
Chemical type: Peptide from protein
Sequence: RRISGVDRYY
Position: 52-61
Source molecule (GenBank): O15239.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Spectrin beta chain, non-erythrocytic 5 (739-747)
Chemical type: Peptide from protein
Sequence: ARLQTALLV
Position: 739-747
Source molecule (GenBank): Q9NRC6.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Lysosomal protective protein (2-10)
Chemical type: Peptide from protein
Sequence: IRAAPPPLF
Position: 2-10
Source molecule (GenBank): P10619.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Mitochondrial import receptor subunit TOM5 homolog (38-46)
Chemical type: Peptide from protein
Sequence: LRVTPFILK
Position: 38-46
Source molecule (GenBank): Q8N4H5.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Cytochrome c oxidase subunit 6C (44-52)
Chemical type: Peptide from protein
Sequence: QRKKAYADF
Position: 44-52
Source molecule (GenBank): P09669.2
Assay category: MhcLigandElution
Result: Positive

Epitope: 40S ribosomal protein S21 (44-53)
Chemical type: Peptide from protein
Sequence: GRFNGQFKTY
Position: 44-53
Source molecule (GenBank): P63220.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 40S ribosomal protein S30 (40-49)
Chemical type: Peptide from protein
Sequence: RRFVNVVPTF
Position: 40-49
Source molecule (GenBank): P62861.1
Assay category: MhcLigandElution
Result: Positive

Epitope: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (58-67)
Chemical type: Peptide from protein
Sequence: RRLQIEDFEA
Position: 58-67
Source molecule (GenBank): Q9P0J0.3
Assay category: MhcLigandElution
Result: Positive

Epitope: H/ACA ribonucleoprotein complex subunit 3 (33-43)
Chemical type: Peptide from protein
Sequence: ARFSPDDKYSR
Position: 33-43
Source molecule (GenBank): Q9NPE3.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 40S ribosomal protein S30 (40-50)
Chemical type: Peptide from protein
Sequence: RRFVNVVPTFG
Position: 40-50
Source molecule (GenBank): P62861.1
Assay category: MhcLigandElution
Result: Positive

Epitope: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (58-68)
Chemical type: Peptide from protein
Sequence: RRLQIEDFEAR
Position: 58-68
Source molecule (GenBank): Q9P0J0.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Histone H2A type 2-C (20-30)
Chemical type: Peptide from protein
Sequence: SRAGLQFPVGR
Position: 20-30
Source molecule (GenBank): Q16777.4
Assay category: MhcLigandElution
Result: Positive

Epitope: Histone H2B type 1-C/E/F/G/I (99-109)
Chemical type: Peptide from protein
Sequence: VRLLLPGELAK
Position: 99-109
Source molecule (GenBank): P62807.4
Assay category: MhcLigandElution
Result: Positive

Epitope: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 (39-49)
Chemical type: Peptide from protein
Sequence: YRVTLNPPGTF
Position: 39-49
Source molecule (GenBank): Q86Y39.3
Assay category: MhcLigandElution
Result: Positive

Epitope: 40S ribosomal protein S30 (40-51)
Chemical type: Peptide from protein
Sequence: RRFVNVVPTFGK
Position: 40-51
Source molecule (GenBank): P62861.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Proteasome subunit beta type-1 precursor (127-134)
Chemical type: Peptide from protein
Sequence: RRFFPYYV
Position: 127-134
Source molecule (GenBank): P20618.2
Assay category: MhcLigandElution
Result: Positive

Epitope: 60S ribosomal protein L13 (189-197)
Chemical type: Peptide from protein
Sequence: ARLFGIRAK
Position: 189-197
Source molecule (GenBank): P26373.4
Assay category: MhcLigandElution
Result: Positive

Epitope: farnesyl pyrophosphate synthetase (36-44)
Chemical type: Peptide from protein
Sequence: ARLKEVLEY
Position: 36-44
Source molecule (GenBank): AAA35820.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 60S ribosomal protein L28 (38-46)
Chemical type: Peptide from protein
Sequence: FRYNGLIHR
Position: 38-46
Source molecule (GenBank): P46779.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Pro-interleukin-16 (881-889)
Chemical type: Peptide from protein
Sequence: GRFSGLLGR
Position: 881-889
Source molecule (GenBank): Q14005.4
Assay category: MhcLigandElution
Result: Positive

Epitope: 60S ribosomal protein L8 (173-181)
Chemical type: Peptide from protein
Sequence: GRIDKPILK
Position: 173-181
Source molecule (GenBank): P62917.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Structural maintenance of chromosomes protein 4 (610-618)
Chemical type: Peptide from protein
Sequence: GRIPGIYGR
Position: 610-618
Source molecule (GenBank): Q9NTJ3.2
Assay category: MhcLigandElution
Result: Positive

Epitope: 60S ribosomal protein L36 (31-39)
Chemical type: Peptide from protein
Sequence: GRLTKHTKF
Position: 31-39
Source molecule (GenBank): Q9Y3U8.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Signal peptidase complex subunit 2 (164-172)
Chemical type: Peptide from protein
Sequence: KRFDDKYTL
Position: 164-172
Source molecule (GenBank): Q15005.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Serine/threonine-protein kinase 38-like (444-452)
Chemical type: Peptide from protein
Sequence: KRFEGLTQR
Position: 444-452
Source molecule (GenBank): Q9Y2H1.3
Assay category: MhcLigandElution
Result: Positive

Epitope: farnesyl pyrophosphate synthetase (184-192)
Chemical type: Peptide from protein
Sequence: KRYKSIVKY
Position: 184-192
Source molecule (GenBank): AAA35820.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Squalene synthase (280-288)
Chemical type: Peptide from protein
Sequence: LRNQSVFNF
Position: 280-288
Source molecule (GenBank): P37268.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 60S ribosomal protein L9 (35-43)
Chemical type: Peptide from protein
Sequence: RRDFNHINV
Position: 35-43
Source molecule (GenBank): P32969.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Proteasome subunit beta type-1 precursor (127-135)
Chemical type: Peptide from protein
Sequence: RRFFPYYVY
Position: 127-135
Source molecule (GenBank): P20618.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Histone H3.2 (53-61)
Chemical type: Peptide from protein
Sequence: RRYQKSTEL
Position: 53-61
Source molecule (GenBank): Q71DI3.3
Assay category: MhcLigandElution
Result: Positive

Epitope: 26S proteasome non-ATPase regulatory subunit 2 (260-268)
Chemical type: Peptide from protein
Sequence: SRFPEALRL
Position: 260-268
Source molecule (GenBank): Q13200.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Armadillo repeat-containing protein 6 (301-309)
Chemical type: Peptide from protein
Sequence: SRLAIRNEF
Position: 301-309
Source molecule (GenBank): Q6NXE6.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Proteasome subunit beta type-2 (94-102)
Chemical type: Peptide from protein
Sequence: SRTPYHVNL
Position: 94-102
Source molecule (GenBank): P49721.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Rab GDP dissociation inhibitor beta (217-226)
Chemical type: Peptide from protein
Sequence: ARYGKSPYLY
Position: 217-226
Source molecule (GenBank): P50395.2
Assay category: MhcLigandElution
Result: Positive

Epitope: 26S proteasome non-ATPase regulatory subunit 3 (293-302)
Chemical type: Peptide from protein
Sequence: GRIKAIQLEY
Position: 293-302
Source molecule (GenBank): O43242.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Nodal modulator 1 (642-651)
Chemical type: Peptide from protein
Sequence: HRFEQAFYTY
Position: 642-651
Source molecule (GenBank): Q15155.5
Assay category: MhcLigandElution
Result: Positive

Epitope: Ras GTPase-activating protein-binding protein 1 (31-40)
Chemical type: Peptide from protein
Sequence: HRFYGKNSSY
Position: 31-40
Source molecule (GenBank): Q13283.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Copine-1 (190-199)
Chemical type: Peptide from protein
Sequence: KRFSVPVQHF
Position: 190-199
Source molecule (GenBank): Q99829.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Histone H4 (92-101)
Chemical type: Peptide from protein
Sequence: KRQGRTLYGF
Position: 92-101
Source molecule (GenBank): P62805.2
Assay category: MhcLigandElution
Result: Positive

Epitope: 60S ribosomal protein L23 (89-98)
Chemical type: Peptide from protein
Sequence: RRKDGVFLYF
Position: 89-98
Source molecule (GenBank): P62829.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ATP synthase F(0) complex subunit C3, mitochondrial (104-114)
Chemical type: Peptide from protein
Sequence: ARNPSLKQQLF
Position: 104-114
Source molecule (GenBank): P48201.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Probable ATP-dependent RNA helicase DDX5 (24-34)
Chemical type: Peptide from protein
Sequence: SRAGPLSGKKF
Position: 24-34
Source molecule (GenBank): P17844.1
Assay category: MhcLigandElution
Result: Positive