Reference: T Friede; V Gnau; G Jung; W Keilholz; S Stevanović; H G Rammensee. "Natural ligand motifs of closely related HLA-DR4 molecules predict features of rheumatoid arthritis associated peptides." Biochimica et biophysica acta (1996).

Epitope: HLA-A2 P1
Chemical type: Peptide from protein
Sequence: VDDTQFVRFDSDAASQRMEP
Position: 28-47
Source molecule (GenBank): AAO20853.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-A2 P2
Chemical type: Peptide from protein
Sequence: DTQFVRFDSDAASQR
Position: 30-44
Source molecule (GenBank): AAO20853.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-A2 P3
Chemical type: Peptide from protein
Sequence: FVRFDSDAASQR
Position: 33-44
Source molecule (GenBank): AAO20853.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-A2 P4
Chemical type: Peptide from protein
Sequence: FVRFDSDAASQRMEP
Position: 33-47
Source molecule (GenBank): AAO20853.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-A2 P5
Chemical type: Peptide from protein
Sequence: VDDTQFVRFDSDAASQRM
Position: 28-45
Source molecule (GenBank): AAO20853.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-A2 P6
Chemical type: Peptide from protein
Sequence: FVRFDSDAASQRM
Position: 33-45
Source molecule (GenBank): AAO20853.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-A2 P7
Chemical type: Peptide from protein
Sequence: VDDTQFVRFDSDAASPRGEP
Position: 27-46
Source molecule (GenBank): CAB86064.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B44 P1
Chemical type: Peptide from protein
Sequence: DGKDYIALNEDLSS
Position: 143-156
Source molecule (GenBank): P30481.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B44 P2
Chemical type: Peptide from protein
Sequence: LSSWTAADTAAQITQ
Position: 154-168
Source molecule (GenBank): P30481.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B44 P3
Chemical type: Peptide from protein
Sequence: LSSWTAADTAAQIT
Position: 154-167
Source molecule (GenBank): P30481.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-DR4beta
Chemical type: Peptide from protein
Sequence: IYFRNQKGSHSGLQPTGFL
Assay category: MhcLigandElution
Result: Positive

Epitope: NTD
Chemical type: Peptide from protein
Sequence: DVAFVKDQTVIQNTD
Assay category: MhcLigandElution
Result: Positive

Epitope: Cathepsin C
Chemical type: Peptide from protein
Sequence: YDHNFVKAINAIQKSW
Position: 170-185
Source molecule (GenBank): AAQ08887.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Ig kappa P2
Chemical type: Peptide from protein
Sequence: HKVYACEVTHQGL
Position: 81-93
Source molecule (GenBank): P01834.2
Assay category: MhcLigandElution
Result: Positive

Epitope: peptide 1
Chemical type: Peptide from protein
Sequence: DGPFRIITVPAALDY
Assay category: MhcLigandElution
Result: Positive

Epitope: sphingolipid activator protein 3
Chemical type: Peptide from protein
Sequence: TGNYRIESVLSS
Position: 165-176
Source molecule (GenBank): P17900.4
Assay category: MhcLigandElution
Result: Positive

Epitope: peptide 2
Chemical type: Peptide from protein
Sequence: YEXALSLPSK
Assay category: MhcLigandElution
Result: Positive

Epitope: VLA-4
Chemical type: Peptide from protein
Sequence: GSLFVYNITTNKYKAFLKQ
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-DQ beta 3 3.2
Chemical type: Peptide from protein
Sequence: SPEDFVYQFKGMCYF
Position: 35-49
Source molecule (GenBank): P01920.1
Assay category: MhcLigandElution
Result: Positive

Epitope: bovine HA
Chemical type: Peptide from protein
Sequence: AEALERMFLSFPTTKT
Position: 27-42
Source molecule (GenBank): P01922
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B38 P1
Chemical type: Peptide from protein
Sequence: GPDGRLLRGHNQFAYDGKDY
Position: 128-147
Source molecule (GenBank): AAA73509.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B38 P2
Chemical type: Peptide from protein
Sequence: GPDGRLLRGHNQFAYDGKD
Position: 128-146
Source molecule (GenBank): AAA73509.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B38 P3
Chemical type: Peptide from protein
Sequence: GPDGRLLRGHNQFAYDGK
Position: 128-145
Source molecule (GenBank): AAA73509.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B38 P4
Chemical type: Peptide from protein
Sequence: GPDGRLLRGHNQFAYDG
Position: 128-144
Source molecule (GenBank): AAA73509.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B38 P5
Chemical type: Peptide from protein
Sequence: GRLLRGHNQFAYDGK
Position: 131-145
Source molecule (GenBank): AAA73509.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-DR alpha
Chemical type: Peptide from protein
Sequence: IIKGVRKSNAAERRG
Position: 238-252
Source molecule (GenBank): P01903.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DR4 beta P1
Chemical type: Peptide from protein
Sequence: IYFRNQKGHSGLQPTGFLS
Position: 248-266
Source molecule (GenBank): P13760.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DR4 beta P3
Chemical type: Peptide from protein
Sequence: FRNQKGHSGLQP
Position: 250-261
Source molecule (GenBank): P13760.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DR4 beta P4
Chemical type: Peptide from protein
Sequence: YFRNQKGHSGLQPTGFLS
Position: 249-266
Source molecule (GenBank): P13760.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Ii
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLQ
Assay category: MhcLigandElution
Result: Positive

Epitope: BLAST-1 P1
Chemical type: Peptide from protein
Sequence: FDKIVEWDSRKSKYFE
Assay category: MhcLigandElution
Result: Positive

Epitope: BLAST-1 P2
Chemical type: Peptide from protein
Sequence: DQKIVEWDSRKYF
Assay category: MhcLigandElution
Result: Positive

Epitope: pyruvate kinase P1
Chemical type: Peptide from protein
Sequence: IKIISKIENHEGVRR
Position: 265-279
Source molecule (GenBank): P14618.4
Assay category: MhcLigandElution
Result: Positive

Epitope: pyruvate kinase P2
Chemical type: Peptide from protein
Sequence: IKIISKIENHEGVR
Position: 265-278
Source molecule (GenBank): P14618.4
Assay category: MhcLigandElution
Result: Positive

Epitope: GAPDH P1
Chemical type: Peptide from protein
Sequence: FGRIGRLVTRAAFNSG
Position: 11-26
Source molecule (GenBank): CAA25833.1
Assay category: MhcLigandElution
Result: Positive

Epitope: GAPDH P2
Chemical type: Peptide from protein
Sequence: FGRIGRLVTRAAFN
Position: 11-24
Source molecule (GenBank): CAA25833.1
Assay category: MhcLigandElution
Result: Positive

Epitope: GAPDH P3
Chemical type: Peptide from protein
Sequence: GFGRIGRLVTRAAFNSG
Position: 10-26
Source molecule (GenBank): CAA25833.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B60 P1
Chemical type: Peptide from protein
Sequence: GSHSMRYFHTAMSRPGRGE
Position: 10-28
Source molecule (GenBank): AAF08606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B60 P2
Chemical type: Peptide from protein
Sequence: SHSMRYFHTAMSRPGRGE
Position: 11-28
Source molecule (GenBank): AAF08606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: GAPDH P4
Chemical type: Peptide from protein
Sequence: YDNSLKIISNASCTTN
Position: 140-155
Source molecule (GenBank): CAA25833.1
Assay category: MhcLigandElution
Result: Positive

Epitope: PGSG P2
Chemical type: Peptide from protein
Sequence: QRARYQWVRCNPDSNS
Position: 31-46
Source molecule (GenBank): AAA60322.1
Assay category: MhcLigandElution
Result: Positive

Epitope: PGSG P3
Chemical type: Peptide from protein
Sequence: RARYQWVRCNPDSNS
Position: 32-46
Source molecule (GenBank): AAA60322.1
Assay category: MhcLigandElution
Result: Positive

Epitope: MIF
Chemical type: Peptide from protein
Sequence: KPPQYIAVHVVPDQ
Position: 33-46
Source molecule (GenBank): P14174.4
Assay category: MhcLigandElution
Result: Positive

Epitope: Transferrin receptor P1
Chemical type: Peptide from protein
Sequence: FREFKLSKVWRDQH
Position: 173-186
Source molecule (GenBank): AAF04564.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Transferrin receptor P2
Chemical type: Peptide from protein
Sequence: FREFKLSKVWRDQ
Position: 173-185
Source molecule (GenBank): AAF04564.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Transferrin receptor P3
Chemical type: Peptide from protein
Sequence: REFKLSKVWRDQH
Position: 174-186
Source molecule (GenBank): AAF04564.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Transferrin receptor P5
Chemical type: Peptide from protein
Sequence: VEPDHYVVVGAQRDA
Position: 397-411
Source molecule (GenBank): AAF04564.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Transferrin receptor P6
Chemical type: Peptide from protein
Sequence: EPDHYVVVGAQRDA
Position: 398-411
Source molecule (GenBank): AAF04564.1
Assay category: MhcLigandElution
Result: Positive

Epitope: similar to transferrin
Chemical type: Peptide from protein
Sequence: THYYAVAVVKKDTDKF
Assay category: MhcLigandElution
Result: Positive

Epitope: Hsp 90-beta
Chemical type: Peptide from protein
Sequence: KELKIDIIPNPQER
Position: 69-82
Source molecule (GenBank): 1307197A
Assay category: MhcLigandElution
Result: Positive

Epitope: beta 2-microglobulin P1
Chemical type: Peptide from protein
Sequence: YLLYYTEFTPTEKD
Position: 83-96
Source molecule (GenBank): AAA51811.1
Assay category: MhcLigandElution
Result: Positive

Epitope: beta 2-microglobulin P2
Chemical type: Peptide from protein
Sequence: LLYYTEFTPTEKDEY
Position: 84-98
Source molecule (GenBank): AAA51811.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Histone H3
Chemical type: Peptide from protein
Sequence: CAIHAKRVTIMPKDIQLA
Position: 111-128
Source molecule (GenBank): AAA52651.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ras-related protein RAB-7
Chemical type: Peptide from protein
Sequence: APNTFKTLDSWRD
Position: 92-104
Source molecule (GenBank): P51149.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Phosphoglycerate kinase
Chemical type: Peptide from protein
Sequence: VADKIQLINNMLD
Position: 217-229
Source molecule (GenBank): NP_000282.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ribosomal protein P1
Chemical type: Peptide from protein
Sequence: KVHGSLARAGKVRGQTPKVA
Position: 1-20
Source molecule (GenBank): Q05472
Assay category: MhcLigandElution
Result: Positive

Epitope: ribosomal protein P2
Chemical type: Peptide from protein
Sequence: SSHKTFRIKRFLAKKQKQNR
Position: 2-21
Source molecule (GenBank): P62891.2
Assay category: MhcLigandElution
Result: Positive

Epitope: ribosomal protein P3
Chemical type: Peptide from protein
Sequence: GKFMKPGKVVLVLAGRYS
Position: 2-19
Source molecule (GenBank): P08526
Assay category: MhcLigandElution
Result: Positive