LiteFold/IEDB huggingface dataset:
Reference: R W Wieten; A Goorhuis; E F F Jonker; G J de Bree; A W de Visser; P J J van Genderen; E B M Remmerswaal; I J M Ten Berge; L G Visser; M P Grobusch; E M M van Leeuwen. "17D yellow fever vaccine elicits comparable long-term immune responses in healthy individuals and immune-compromised patients." The Journal of infection (2016).

Epitope: NS4b 214-222
Chemical type: Peptide from protein
Sequence: LLWNGPMAV
Position: 2470-2478
Source molecule (GenBank): P03314.1
Assay category: TCell
Result: Positive
Host:  20-69 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS4a AMDTISVFL
Chemical type: Peptide from protein
Sequence: AMDTISVFL
Position: 2130-2138
Source molecule (GenBank): P03314.1
Assay category: TCell
Result: Positive
Host:  20-69 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 218-226
Chemical type: Peptide from protein
Sequence: RRRLRTLVL
Position: 1702-1710
Source molecule (GenBank): P03314.1
Assay category: TCell
Result: Positive
Host:  20-69 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS2b 110-118
Chemical type: Peptide from protein
Sequence: HPFALLLVL
Position: 1464-1472
Source molecule (GenBank): P03314.1
Assay category: TCell
Result: Positive
Host:  20-69 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Mark T Orr; Elyse A Beebe; Thomas E Hudson; David Argilla; Po-Wei D Huang; Valerie A Reese; Christopher B Fox; Steven G Reed; Rhea N Coler. "Mucosal delivery switches the response to an adjuvanted tuberculosis vaccine from systemic TH1 to tissue-resident TH17 responses without impacting the protective efficacy." Vaccine (2015).

Epitope: Rv3619 epitope (VIYEQANAHGQ)
Chemical type: Peptide from protein
Sequence: VIYEQANAHGQ
Position: 63-73
Source molecule (GenBank): P0A570.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo
Reference: Daryan A Kaveh; M Carmen Garcia-Pelayo; Paul R Webb; Esen E Wooff; Véronique S Bachy; Philip J Hogarth. "Parenteral adenoviral boost enhances BCG induced protection, but not long term survival in a murine model of bovine TB." Vaccine (2016).

Epitope: TB10.4 peptide
Chemical type: Peptide from protein
Sequence: SSTHEANTMAMMARDT
Position: 73-88
Source molecule (GenBank): P0A569.2
Assay category: TCell
Result: Positive
Host: F 8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: TB10.4 peptide
Chemical type: Peptide from protein
Sequence: SSTHEANTMAMMARDT
Position: 73-88
Source molecule (GenBank): P0A569.2
Assay category: TCell
Result: Positive
Host: F 8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: L H Laws; C E Parker; G Cherala; Y Koguchi; A Waisman; M K Slifka; M H Oberbarnscheidt; J S Obhrai; M Y Yeung; L V Riella. "Inflammation Causes Resistance to Anti-CD20-Mediated B Cell Depletion." American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons (2016).

Epitope: gpB (498-505)
Chemical type: Peptide from protein
Sequence: SSIEFARL
Position: 498-505
Source molecule (GenBank): AAA19496.1
Assay category: BCell
Result: Positive
Reference: J S Young; J Chen; M L Miller; V Vu; C Tian; J J Moon; M-L Alegre; R Sciammas; A S Chong. "Delayed Cytotoxic T Lymphocyte-Associated Protein 4-Immunoglobulin Treatment Reverses Ongoing Alloantibody Responses and Rescues Allografts From Acute Rejection." American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons (2016).

Epitope: Ova
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 258-265
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Jinghui Yang; Jianjun Chen; James S Young; Qiang Wang; Dengping Yin; Roger Sciammas; Anita S Chong. "Tracing Donor-MHC Class II Reactive B cells in Mouse Cardiac Transplantation: Delayed CTLA4-Ig Treatment Prevents Memory Alloreactive B-Cell Generation." Transplantation (2016).

Epitope: pCons-CDR1
Chemical type: Peptide, no natural source
Sequence: FIEWNKLRFRQGLEW
Assay category: BCell
Result: Positive

Epitope: pCons-CDR1
Chemical type: Peptide, no natural source
Sequence: FIEWNKLRFRQGLEW
Assay category: BCell
Result: Positive
Reference: Michelle Goritzka; Catherine Pereira; Spyridon Makris; Lydia R Durant; Cecilia Johansson. "T cell responses are elicited against Respiratory Syncytial Virus in the absence of signalling through TLRs, RLRs and IL-1R/IL-18R." Scientific reports (2015).

Epitope: RSV MP (187-195)
Chemical type: Peptide from protein
Sequence: NAITNAKII
Position: 187-195
Source molecule (GenBank): AAX23991.1
Assay category: TCell
Result: Positive
Host:  8-14 weeks
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Direct Ex Vivo
Reference: Xiangming Li; Jing Huang; Min Zhang; Ryota Funakoshi; Dutta Sheetij; Roberta Spaccapelo; Andrea Crisanti; Victor Nussenzweig; Ruth S Nussenzweig; Moriya Tsuji. "Human CD8+ T cells mediate protective immunity induced by a human malaria vaccine in human immune system mice." Vaccine (2016).

Epitope: PfCSP (327-335)
Chemical type: Peptide from protein
Sequence: YLNKIQNSL
Position: 327-335
Source molecule (GenBank): AAA29527.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Silvia de la Cruz; Marcos Alcocer; Raquel Madrid; Aina García; Rosario Martín; Isabel González; Teresa García. "Production of in vivo biotinylated scFv specific to almond (Prunus dulcis) proteins by recombinant Pichia pastoris." Journal of biotechnology (2016).

Epitope: C-myc epitope
Chemical type: Peptide from protein
Sequence: EQKLISEEDL
Position: 410-419
Source molecule (GenBank): P01106.1
Assay category: BCell
Result: Positive
Reference: Benjamin J Compton; Ching-wen Tang; Karen A Johnston; Taryn L Osmond; Colin M Hayman; David S Larsen; Ian F Hermans; Gavin F Painter. "Synthesis and Activity of 6″-Deoxy-6″-thio-α-GalCer and Peptide Conjugates." Organic letters (2015).

Epitope: 6"-Deoxy-6"-Thio- α -GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α -GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: OVA 257-264
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 258-265
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Host:  6-12 weeks
Cell type: lymphocyte
Tissue: lymphoid
Culture conditions: In Vivo
Reference: Masashi Satoh; Miyuki Hoshino; Koki Fujita; Misao Iizuka; Satoshi Fujii; Christopher S Clingan; Luc Van Kaer; Kazuya Iwabuchi. "Adipocyte-specific CD1d-deficiency mitigates diet-induced obesity and insulin resistance in mice." Scientific reports (2016).

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: PBS-57
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: liver
Culture conditions: Direct Ex Vivo
Reference: Pulak Tripathi; Suzanne C Morris; Charles Perkins; Allyson Sholl; Fred D Finkelman; David A Hildeman. "IL-4 and IL-15 promotion of virtual memory CD8<sup>+</sup> T cells is determined by genetic background." European journal of immunology (2016).

Epitope: gp33
Chemical type: Peptide from protein
Sequence: KAVYNFATC
Position: 33-41
Source molecule (GenBank): P09991.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: nucleoprotein
Chemical type: Peptide from protein
Sequence: RPQASGVYM
Position: 118-126
Source molecule (GenBank): P09992.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Haoqing Wang; Alexander A Cohen; Rachel P Galimidi; Harry B Gristick; Grant J Jensen; Pamela J Bjorkman. "Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop." Proceedings of the National Academy of Sciences of the United States of America (2016).

Epitope: Epitope of 17b Fab on HIV-1 gp120 core
Chemical type: Discontinuous protein residues
Discontinuous residues: C118, V119, T201, Q202, A203, L367, R416, I417, Q419, I420, M431, P434
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 8ANC195 Fab on HIV-1 gp120 core
Chemical type: Region on multi-chain protein
Discontinuous residues: B: W607, W611, N613, W625, L626, Q627, W628, K630, E631, Y638; D: W44, T90, E91, F92, N93, T235, G236, P237, E274, N275, I276, T277, N278, F351, N459, K484
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive
Reference: Constantinos Kurt Wibmer; Jason Gorman; Colin S Anthony; Nonhlanhla N Mkhize; Aliaksandr Druz; Talita York; Stephen D Schmidt; Phillip Labuschagne; Mark K Louder; Robert T Bailer; Salim S Abdool Karim; John R Mascola; Carolyn Williamson; Penny L Moore; Peter D Kwong; Lynn Morris. "Structure of an N276-Dependent HIV-1 Neutralizing Antibody Targeting a Rare V5 Glycan Hole Adjacent to the CD4 Binding Site." Journal of virology (2016).

Epitope: Epitope of CAP257-RH1 on HIV-1
Chemical type: Discontinuous protein residues
Discontinuous residues: N280, N281, V282, K283,  K354, K356, S364, G365, G366, T454, R455, D456, G457, G458, V459, D460, T461, T462, K463, R467
Source molecule (GenBank): AAW64262.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.21
Host: F

Epitope: Epitope of CAP257-RH1 on HIV-1
Chemical type: Discontinuous protein residues
Discontinuous residues: N280, N281, V282, K283,  K354, K356, S364, G365, G366, T454, R455, D456, G457, G458, V459, D460, T461, T462, K463, R467
Source molecule (GenBank): AAW64262.1
Assay category: BCell
Result: Positive
Host: F

Epitope: Epitope of CAP257-RH1 on HIV-1
Chemical type: Discontinuous protein residues
Discontinuous residues: N280, N281, V282, K283,  K354, K356, S364, G365, G366, T454, R455, D456, G457, G458, V459, D460, T461, T462, K463, R467
Source molecule (GenBank): AAW64262.1
Assay category: BCell
Result: Positive
Host: F
Reference: Jon M Steichen; Daniel W Kulp; Talar Tokatlian; Amelia Escolano; Pia Dosenovic; Robyn L Stanfield; Laura E McCoy; Gabriel Ozorowski; Xiaozhen Hu; Oleksandr Kalyuzhniy; Bryan Briney; Torben Schiffner; Fernando Garces; Natalia T Freund; Alexander D Gitlin; Sergey Menis; Erik Georgeson; Michael Kubitz; Yumiko Adachi; Meaghan Jones; Andrew A Mutafyan; Dong Soo Yun; Christian T Mayer; Andrew B Ward; Dennis R Burton; Ian A Wilson; Darrell J Irvine; Michel C Nussenzweig; William R Schief. "HIV Vaccine Design to Target Germline Precursors of Glycan-Dependent Broadly Neutralizing Antibodies." Immunity (2016).

Epitope: Epitope of 35O22 Fab on HIV-1 gp140 trimer MD39-10MUA
Chemical type: Region on multi-chain protein
Discontinuous residues: B: G524, S525, T526, S617, E618, D621, N622, T624, L626, Q627, K630; G: E86, N87, T89, P237, P239
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.5
Host: M

Epitope: Epitope of PGT124 Fab on HIV-1 gp140 trimer MD39-10MUA
Chemical type: Discontinuous protein residues
Discontinuous residues: G322, D323, I324, R325, H328, T412
Source molecule (GenBank): ABA61516.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.5
Reference: Pablo Guardado-Calvo; Eduardo A Bignon; Eva Stettner; Scott Allen Jeffers; Jimena Pérez-Vargas; Gerard Pehau-Arnaudet; M Alejandra Tortorici; Jean-Luc Jestin; Patrick England; Nicole D Tischler; Félix A Rey. "Mechanistic Insight into Bunyavirus-Induced Membrane Fusion from Structure-Function Analyses of the Hantavirus Envelope Glycoprotein Gc." PLoS pathogens (2016).

Epitope: Epitope of scFv A5 on Hantavirus envelope Gc
Chemical type: Discontinuous protein residues
Discontinuous residues: T731, S732, F733, H734, Y742, E743, P745, W746
Source molecule (GenBank): P08668.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.0

Epitope: Epitope of scFv A5 on Hantavirus envelope Gc
Chemical type: Discontinuous protein residues
Discontinuous residues: T731, S732, F733, H734, Y742, E743, P745, W746
Source molecule (GenBank): P08668.1
Assay category: BCell
Result: Positive

Epitope: Epitope of scFv A5 on Hantavirus envelope Gc
Chemical type: Discontinuous protein residues
Discontinuous residues: T731, S732, F733, H734, Y742, E743, P745, W746
Source molecule (GenBank): P08668.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1110.0

Epitope: Epitope of scFv A5 on Hantavirus envelope Gc
Chemical type: Discontinuous protein residues
Discontinuous residues: T731, S732, F733, H734, Y742, E743, P745, W746
Source molecule (GenBank): P08668.1
Assay category: BCell
Result: Positive
Quantitative measurement: 17400.0

Epitope: Epitope of scFv A5 on Hantavirus envelope Gc
Chemical type: Discontinuous protein residues
Discontinuous residues: T731, S732, F733, H734, Y742, E743, P745, W746
Source molecule (GenBank): P08668.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0194
Reference: Xin Jiang; Irina Smirnova; Vladimir Kasho; Jianping Wu; Kunio Hirata; Meng Ke; Els Pardon; Jan Steyaert; Nieng Yan; H Ronald Kaback. "Crystal structure of a LacY-nanobody complex in a periplasmic-open conformation." Proceedings of the National Academy of Sciences of the United States of America (2016).

Epitope: Epitope of nanobody on LacY (lactose permease)
Chemical type: Discontinuous protein residues
Discontinuous residues: K42, T45, A244, N245, F246, T248, S249, F250, F251, A252, T253, G254, T258, A309, T310, Y373, E374, G377, F378
Source molecule (GenBank): P02920.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.3

Epitope: Epitope of nanobody on LacY (lactose permease)
Chemical type: Discontinuous protein residues
Discontinuous residues: K42, T45, A244, N245, F246, T248, S249, F250, F251, A252, T253, G254, T258, A309, T310, Y373, E374, G377, F378
Source molecule (GenBank): P02920.1
Assay category: BCell
Result: Positive
Reference: Marek Wieczorek; Jana Sticht; Sebastian Stolzenberg; Sebastian Günther; Christoph Wehmeyer; Zeina El Habre; Miguel Álvaro-Benito; Frank Noé; Christian Freund. "MHC class II complexes sample intermediate states along the peptide exchange pathway." Nature communications (2016).

Epitope: CLIP 102-120 (M107W)
Chemical type: Peptide, no natural source
Sequence: KPVSKWRMATPLLMQALPM
Assay category: MhcBinding
Result: Positive

Epitope: CLIP 102-120 (M107W)
Chemical type: Peptide, no natural source
Sequence: KPVSKWRMATPLLMQALPM
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.34

Epitope: CLIP 102-120 (M107W)
Chemical type: Peptide, no natural source
Sequence: KPVSKWRMATPLLMQALPM
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 3.2

Epitope: CLIP 102-120 (M107W)
Chemical type: Peptide, no natural source
Sequence: KPVSKWRMATPLLMQALPM
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 84.6

Epitope: CLIP 102-120 (M107W)
Chemical type: Peptide, no natural source
Sequence: KPVSKWRMATPLLMQALPM
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 65.8

Epitope: CLIP 102-120 (M107W)
Chemical type: Peptide, no natural source
Sequence: KPVSKWRMATPLLMQALPM
Assay category: MhcBinding
Result: Positive

Epitope: CLIP 102-120
Chemical type: Peptide from protein
Sequence: KPVSKMRMATPLLMQALPM
Position: 102-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 80.0

Epitope: CLIP 102-120
Chemical type: Peptide from protein
Sequence: KPVSKMRMATPLLMQALPM
Position: 102-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive
Reference: Walter A Bogdanoff; Jocelyn Campos; Edmundo I Perez; Lu Yin; David L Alexander; Rebecca M DuBois. "Structure of a Human Astrovirus Capsid-Antibody Complex and Mechanistic Insights into Virus Neutralization." Journal of virology (2017).

Epitope: Epitope of PL-2 scFv on human astrovirus capsid protein Spike2
Chemical type: Discontinuous protein residues
Discontinuous residues: G460, T461, N462, S463, D465, N513, I514, Q552, Y554, T577, S578, P579, E580, T581
Source molecule (GenBank): Q82446.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.87
Host: F 6-8 weeks

Epitope: Epitope of PL-2 scFv on human astrovirus capsid protein Spike2
Chemical type: Discontinuous protein residues
Discontinuous residues: G460, T461, N462, S463, D465, N513, I514, Q552, Y554, T577, S578, P579, E580, T581
Source molecule (GenBank): Q82446.1
Assay category: BCell
Result: Positive
Quantitative measurement: 655000.0
Host: F 6-8 weeks

Epitope: Epitope of PL-2 scFv on human astrovirus capsid protein Spike2
Chemical type: Discontinuous protein residues
Discontinuous residues: G460, T461, N462, S463, D465, N513, I514, Q552, Y554, T577, S578, P579, E580, T581
Source molecule (GenBank): Q82446.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.24
Host: F 6-8 weeks

Epitope: Epitope of PL-2 scFv on human astrovirus capsid protein Spike2
Chemical type: Discontinuous protein residues
Discontinuous residues: G460, T461, N462, S463, D465, N513, I514, Q552, Y554, T577, S578, P579, E580, T581
Source molecule (GenBank): Q82446.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: Epitope of PL-2 scFv on human astrovirus capsid protein Spike2
Chemical type: Discontinuous protein residues
Discontinuous residues: G460, T461, N462, S463, D465, N513, I514, Q552, Y554, T577, S578, P579, E580, T581
Source molecule (GenBank): Q82446.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00123
Host: F 6-8 weeks

Epitope: Epitope of PL-2 scFv on human astrovirus capsid protein Spike2
Chemical type: Discontinuous protein residues
Discontinuous residues: G460, T461, N462, S463, D465, N513, I514, Q552, Y554, T577, S578, P579, E580, T581
Source molecule (GenBank): Q82446.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Ju Yeon Lee; Hyun Tae Lee; Woori Shin; Jongseok Chae; Jaemo Choi; Sung Hyun Kim; Heejin Lim; Tae Won Heo; Kyeong Young Park; Yeon Ji Lee; Seong Eon Ryu; Ji Young Son; Jee Un Lee; Yong-Seok Heo. "Structural basis of checkpoint blockade by monoclonal antibodies in cancer immunotherapy." Nature communications (2016).

Epitope: Epitope of pembrolizumab on PD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: S62, V64, F63, N66, Y68, Q75, T76, D77, K78, A81, F82, P83, E84, D85, R86, S87, Q88, P89, G90, I126, L128, A129, K131, A132, I134
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.0

Epitope: Epitope of BM5-936559 on PD-L1
Chemical type: Discontinuous protein residues
Discontinuous residues: D49, A51, A52, I54, Y56, E58, Q66, V68, H69, R113, M115, S117, G119, G120, A121, D122, Y123
Source molecule (GenBank): Q9NZQ7.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.8

Epitope: Epitope of tremelimumab on CTLA-4
Chemical type: Discontinuous protein residues
Discontinuous residues: K36, A37, M38, E68, R70, Q76, S79, Q80, V81, E83, L126, I128, K130, E132, M134, P137, P138, Y139, Y140, L141, I143, N145
Source molecule (GenBank): P16410.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.0
Reference: Sharavathi Guddehalli Parameswarappa; Katrin Reppe; Andreas Geissner; Petra Ménová; Subramanian Govindan; Adam D J Calow; Annette Wahlbrink; Markus W Weishaupt; Bopanna Ponnappa Monnanda; Roland Lawrence Bell; Liise-Anne Pirofski; Norbert Suttorp; Leif Erik Sander; Martin Witzenrath; Claney Lebev Pereira; Chakkumkal Anish; Peter H Seeberger. "A Semi-synthetic Oligosaccharide Conjugate Vaccine Candidate Confers Protection against Streptococcus pneumoniae Serotype 3 Infection." Cell chemical biology (2016).

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: F

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F

Epitope: Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F

Epitope: Compound 2b
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 2b
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 8
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative

Epitope: Compound 8
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative

Epitope: Compound 9
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 9
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 10
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Compound 10
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Reference: Adam Zuiani; Kevin Chen; Megan C Schwarz; James P White; Vincent C Luca; Daved H Fremont; David Wang; Matthew J Evans; Michael S Diamond. "A Library of Infectious Hepatitis C Viruses with Engineered Mutations in the E2 Gene Reveals Growth-Adaptive Mutations That Modulate Interactions with Scavenger Receptor Class B Type I." Journal of virology (2016).

Epitope: HMAb HC84.26
Chemical type: Discontinuous protein residues
Discontinuous residues: L441, F442, Y443, W616
Source molecule (GenBank): AAA45534.1
Assay category: BCell
Result: Positive