Reference: Swetha Ramachandran; Veselin Grozdanov; Bianca Leins; Katharina Kandler; Simon Witzel; Medhanie Mulaw; Albert C Ludolph; Jochen H Weishaupt; Karin M Danzer. "Low T-cell reactivity to TDP-43 peptides in ALS." Frontiers in immunology (2023).

Epitope: TDP-43 33-43
Chemical type: Peptide from protein
Sequence: AQFPGACGLRY
Position: 33-43
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 33-43
Chemical type: Peptide from protein
Sequence: AQFPGACGLRY
Position: 33-43
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 33-43
Chemical type: Peptide from protein
Sequence: AQFPGACGLRY
Position: 33-43
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 33-43
Chemical type: Peptide from protein
Sequence: AQFPGACGLRY
Position: 33-43
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 67-89
Chemical type: Peptide from protein
Sequence: GWGNLVYVVNYPKDNKRKMDETD
Position: 67-89
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 67-89
Chemical type: Peptide from protein
Sequence: GWGNLVYVVNYPKDNKRKMDETD
Position: 67-89
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 67-89
Chemical type: Peptide from protein
Sequence: GWGNLVYVVNYPKDNKRKMDETD
Position: 67-89
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 67-89
Chemical type: Peptide from protein
Sequence: GWGNLVYVVNYPKDNKRKMDETD
Position: 67-89
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 90-98
Chemical type: Peptide from protein
Sequence: ASSAVKVKR
Position: 90-98
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 90-98
Chemical type: Peptide from protein
Sequence: ASSAVKVKR
Position: 90-98
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 90-98
Chemical type: Peptide from protein
Sequence: ASSAVKVKR
Position: 90-98
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 90-98
Chemical type: Peptide from protein
Sequence: ASSAVKVKR
Position: 90-98
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 103-117
Chemical type: Peptide from protein
Sequence: TSDLIVLGLPWKTTE
Position: 103-117
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 103-117
Chemical type: Peptide from protein
Sequence: TSDLIVLGLPWKTTE
Position: 103-117
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 103-117
Chemical type: Peptide from protein
Sequence: TSDLIVLGLPWKTTE
Position: 103-117
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 103-117
Chemical type: Peptide from protein
Sequence: TSDLIVLGLPWKTTE
Position: 103-117
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 125-133
Chemical type: Peptide from protein
Sequence: STFGEVLMV
Position: 125-133
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 125-133
Chemical type: Peptide from protein
Sequence: STFGEVLMV
Position: 125-133
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 125-133
Chemical type: Peptide from protein
Sequence: STFGEVLMV
Position: 125-133
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 125-133
Chemical type: Peptide from protein
Sequence: STFGEVLMV
Position: 125-133
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 160-168
Chemical type: Peptide from protein
Sequence: KVMSQRHMI
Position: 160-168
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 160-168
Chemical type: Peptide from protein
Sequence: KVMSQRHMI
Position: 160-168
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 160-168
Chemical type: Peptide from protein
Sequence: KVMSQRHMI
Position: 160-168
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 160-168
Chemical type: Peptide from protein
Sequence: KVMSQRHMI
Position: 160-168
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 206-214
Chemical type: Peptide from protein
Sequence: ELREFFSQY
Position: 206-214
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 206-214
Chemical type: Peptide from protein
Sequence: ELREFFSQY
Position: 206-214
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 206-214
Chemical type: Peptide from protein
Sequence: ELREFFSQY
Position: 206-214
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 206-214
Chemical type: Peptide from protein
Sequence: ELREFFSQY
Position: 206-214
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 310-324
Chemical type: Peptide from protein
Sequence: GMNFGAFSINPAMMA
Position: 310-324
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 310-324
Chemical type: Peptide from protein
Sequence: GMNFGAFSINPAMMA
Position: 310-324
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 310-324
Chemical type: Peptide from protein
Sequence: GMNFGAFSINPAMMA
Position: 310-324
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 310-324
Chemical type: Peptide from protein
Sequence: GMNFGAFSINPAMMA
Position: 310-324
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 398-412
Chemical type: Peptide from protein
Sequence: NGGFGSSMDSKSSGW
Position: 398-412
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 398-412
Chemical type: Peptide from protein
Sequence: NGGFGSSMDSKSSGW
Position: 398-412
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 398-412
Chemical type: Peptide from protein
Sequence: NGGFGSSMDSKSSGW
Position: 398-412
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TDP-43 398-412
Chemical type: Peptide from protein
Sequence: NGGFGSSMDSKSSGW
Position: 398-412
Source molecule (GenBank): Q13148.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated