Reference: Isaac Quiros-Fernandez; Mansour Poorebrahim; Elham Fakhr; Angel Cid-Arregui. "Immunogenic T cell epitopes of SARS-CoV-2 are recognized by circulating memory and naïve CD8 T cells of unexposed individuals." EBioMedicine (2021).

Epitope: SARS-CoV2-S-P1
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-S-P1
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-S-P1
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-S-P2
Chemical type: Peptide from protein
Sequence: VLNDILSRL
Position: 976-984
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-S-P3
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-S-P3
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-S-P3
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS-CoV2-S-P3
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-S-P3
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-S-P4
Chemical type: Peptide from protein
Sequence: KIADYNYKL
Position: 417-425
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-S-P5
Chemical type: Peptide from protein
Sequence: VVFLHVTYV
Position: 1060-1068
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-S-P6
Chemical type: Peptide from protein
Sequence: NLNESLIDL
Position: 1192-1200
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-pp1ab-P7
Chemical type: Peptide from protein
Sequence: FLLNKEMYL
Position: 3183-3191
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-pp1ab-P8
Chemical type: Peptide from protein
Sequence: YLATALLTL
Position: 1675-1683
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P8
Chemical type: Peptide from protein
Sequence: YLATALLTL
Position: 1675-1683
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P8
Chemical type: Peptide from protein
Sequence: YLATALLTL
Position: 1675-1683
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-pp1ab-P9
Chemical type: Peptide from protein
Sequence: VMVELVAEL
Position: 84-92
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P9
Chemical type: Peptide from protein
Sequence: VMVELVAEL
Position: 84-92
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P9
Chemical type: Peptide from protein
Sequence: VMVELVAEL
Position: 84-92
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-pp1ab-P10
Chemical type: Peptide from protein
Sequence: SMWALIISV
Position: 3732-3740
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-pp1ab-P11
Chemical type: Peptide from protein
Sequence: FLMSFTVL
Position: 3085-3092
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-pp1ab-P12
Chemical type: Peptide from protein
Sequence: TMADLVYAL
Position: 4515-4523
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P12
Chemical type: Peptide from protein
Sequence: TMADLVYAL
Position: 4515-4523
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P12
Chemical type: Peptide from protein
Sequence: TMADLVYAL
Position: 4515-4523
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS-CoV2-pp1ab-P12
Chemical type: Peptide from protein
Sequence: TMADLVYAL
Position: 4515-4523
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P12
Chemical type: Peptide from protein
Sequence: TMADLVYAL
Position: 4515-4523
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-pp1ab-P13
Chemical type: Peptide from protein
Sequence: LMIERFVSL
Position: 5246-5254
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-pp1ab-P14
Chemical type: Peptide from protein
Sequence: LLADKFPVL
Position: 6246-6254
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P14
Chemical type: Peptide from protein
Sequence: LLADKFPVL
Position: 6246-6254
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P14
Chemical type: Peptide from protein
Sequence: LLADKFPVL
Position: 6246-6254
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-pp1ab-P15
Chemical type: Peptide from protein
Sequence: MMISAGFSL
Position: 6425-6433
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-pp1ab-P16
Chemical type: Peptide from protein
Sequence: FLIGCNYL
Position: 7003-7010
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P16
Chemical type: Peptide from protein
Sequence: FLIGCNYL
Position: 7003-7010
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P16
Chemical type: Peptide from protein
Sequence: FLIGCNYL
Position: 7003-7010
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS-CoV2-pp1ab-P16
Chemical type: Peptide from protein
Sequence: FLIGCNYL
Position: 7003-7010
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-pp1ab-P16
Chemical type: Peptide from protein
Sequence: FLIGCNYL
Position: 7003-7010
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-N-P17
Chemical type: Peptide from protein
Sequence: LLLDRLNQL
Position: 222-230
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-N-P17
Chemical type: Peptide from protein
Sequence: LLLDRLNQL
Position: 222-230
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-N-P17
Chemical type: Peptide from protein
Sequence: LLLDRLNQL
Position: 222-230
Source molecule (GenBank): P0DTC9.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-3a-P19
Chemical type: Peptide from protein
Sequence: YLYALVYFL
Position: 107-115
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-3a-P20
Chemical type: Peptide from protein
Sequence: WLIVGVALL
Position: 45-53
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-3a-P21
Chemical type: Peptide from protein
Sequence: LLYDANYFL
Position: 139-147
Source molecule (GenBank): P0DTC3.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-3a-P21
Chemical type: Peptide from protein
Sequence: LLYDANYFL
Position: 139-147
Source molecule (GenBank): P0DTC3.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-3a-P21
Chemical type: Peptide from protein
Sequence: LLYDANYFL
Position: 139-147
Source molecule (GenBank): P0DTC3.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-3a-P21
Chemical type: Peptide from protein
Sequence: LLYDANYFL
Position: 139-147
Source molecule (GenBank): P0DTC3.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS-CoV2-3a-P21
Chemical type: Peptide from protein
Sequence: LLYDANYFL
Position: 139-147
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SARS-CoV2-3a-P22
Chemical type: Peptide from protein
Sequence: ALSKGVHFV
Position: 72-80
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-E-P23
Chemical type: Peptide from protein
Sequence: FLAFVVFLL
Position: 20-28
Source molecule (GenBank): P0DTC4.1
Assay category: MhcBinding
Result: Negative

Epitope: SARS-CoV2-E-P24
Chemical type: Peptide from protein
Sequence: SLVKPSFYV
Position: 50-58
Source molecule (GenBank): P0DTC4.1
Assay category: MhcBinding
Result: Positive

Epitope: SARS-CoV2-M-P25
Chemical type: Peptide from protein
Sequence: FLTWICLL
Position: 28-35
Source molecule (GenBank): P0DTC5.1
Assay category: MhcBinding
Result: Negative

Epitope: SARS-CoV2-M-P26
Chemical type: Peptide from protein
Sequence: FLFLTWICLL
Position: 26-35
Source molecule (GenBank): P0DTC5.1
Assay category: MhcBinding
Result: Negative

Epitope: SARS-CoV2-M-P27
Chemical type: Peptide from protein
Sequence: WLSYFIASFRL
Position: 92-102
Source molecule (GenBank): P0DTC5.1
Assay category: MhcBinding
Result: Positive