Reference: Karuna P Karunakaran; Hong Yu; Xiaozhou Jiang; Queenie Chan; Kyung-Mee Moon; Leonard J Foster; Robert C Brunham. "Outer membrane proteins preferentially load MHC class II peptides: implications for a Chlamydia trachomatis T cell vaccine." Vaccine (2015).

Epitope: major outer membrane protein, porin (23-34)
Chemical type: Peptide from protein
Sequence: LPVGNPAEPSLM
Position: 23-34
Source molecule (GenBank): AAF38941.1
Assay category: MhcLigandElution
Result: Positive

Epitope: major outer membrane protein, porin (23-37)
Chemical type: Peptide from protein
Sequence: LPVGNPAEPSLMIDG
Position: 23-37
Source molecule (GenBank): AAF38941.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ABC transporter, permease protein, putative (2-9)
Chemical type: Peptide from protein
Sequence: KKFISYAL
Position: 2-9
Source molecule (GenBank): AAF73540.1
Assay category: MhcLigandElution
Result: Positive

Epitope: polymorphic membrane protein E/F family (454-471)
Chemical type: Peptide from protein
Sequence: ISSDLQAHMIASKTHNQI
Position: 454-471
Source molecule (GenBank): AAF39131.1
Assay category: MhcLigandElution
Result: Positive

Epitope: polymorphic membrane protein G family (340-356)
Chemical type: Peptide from protein
Sequence: KDEGVVFFSKNIAAGKG
Position: 340-356
Source molecule (GenBank): AAF39132.1
Assay category: MhcLigandElution
Result: Positive

Epitope: signal recognition particle (330-341)
Chemical type: Peptide from protein
Sequence: EDFYKQMRAFRR
Position: 330-341
Source molecule (GenBank): AAF39161.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein (54-62)
Chemical type: Peptide from protein
Sequence: IAAAGTGLL
Position: 54-62
Source molecule (GenBank): AAF39249.1
Assay category: MhcLigandElution
Result: Positive

Epitope: conserved hypothetical protein (848-860)
Chemical type: Peptide from protein
Sequence: ITGIVPISPGVRA
Position: 848-860
Source molecule (GenBank): AAF39264.2
Assay category: MhcLigandElution
Result: Positive

Epitope: 50S ribosomal protein L1 (126-136)
Chemical type: Peptide from protein
Sequence: KLGKVLGPRNL
Position: 126-136
Source molecule (GenBank): AAF39424.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Translocated actin recruiting phosphoprotein 33
Chemical type: Peptide from protein
Sequence: VTNKVTLAMQGQKLEG
Position: 958-973
Source molecule (GenBank): AAF39550.1
Assay category: MhcLigandElution
Result: Positive

Epitope: conserved hypothetical protein (334-342)
Chemical type: Peptide from protein
Sequence: GSFAPVGLN
Position: 334-342
Source molecule (GenBank): AAF39703.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Probable cytosol aminopeptidase (40-55)
Chemical type: Peptide from protein
Sequence: YKLVYQNALSNFSGKK
Position: 40-55
Source molecule (GenBank): O84049.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 60 kDa chaperonin (32-55)
Chemical type: Peptide from protein
Sequence: GPKGRHVVIDKSFGSPQVTKDGVT
Position: 32-55
Source molecule (GenBank): P0C0Z7.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Chaperone protein ClpB (567-583)
Chemical type: Peptide from protein
Sequence: EERVVGQPFAIAAVSDS
Position: 567-583
Source molecule (GenBank): O84115.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein 33 (51-64)
Chemical type: Peptide from protein
Sequence: DLKVTGPTIHTDLD
Position: 51-64
Source molecule (GenBank): AFU23684.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein 60 (69-84)
Chemical type: Peptide from protein
Sequence: GKLIVTNPKSDISFGG
Position: 69-84
Source molecule (GenBank): ADJ67913.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 3-oxoacyl-[acyl-carrier-protein] reductase FabG (150-168)
Chemical type: Peptide from protein
Sequence: GSPGQTNYAAAKAGIIGFS
Position: 150-168
Source molecule (GenBank): P38004.3
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein (172-191)
Chemical type: Peptide from protein
Sequence: SPKEAAIAAARASLSPEEKR
Position: 172-191
Source molecule (GenBank): NP_219794.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 50S ribosomal protein L21 (46-65)
Chemical type: Peptide from protein
Sequence: FDGEKASVGAPTVGNAVVKG
Position: 46-65
Source molecule (GenBank): O84425.1
Assay category: MhcLigandElution
Result: Positive

Epitope: anti-sigma factor antagonist (20-37)
Chemical type: Peptide from protein
Sequence: KLDGVSSPAVQESISESL
Position: 20-37
Source molecule (GenBank): NP_219936.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein (74-88)
Chemical type: Peptide from protein
Sequence: TPSAVNPLPNPEIDS
Position: 74-88
Source molecule (GenBank): NP_219985.1
Assay category: MhcLigandElution
Result: Positive

Epitope: glyceraldehyde-3-phosphate dehydrogenase (47-62)
Chemical type: Peptide from protein
Sequence: DSTHGSFAPQATFSDG
Position: 47-62
Source molecule (GenBank): NP_220020.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 50S ribosomal protein L6 (45-63)
Chemical type: Peptide from protein
Sequence: VKGNEVFVTPAAHVVDRPG
Position: 45-63
Source molecule (GenBank): NP_220029.1
Assay category: MhcLigandElution
Result: Positive

Epitope: type III secretion system protein YscJ (294-325)
Chemical type: Peptide from protein
Sequence: ETPGAAEGAEAQTASEQPSKENAEKQEENNED
Position: 294-325
Source molecule (GenBank): NP_220074.1
Assay category: MhcLigandElution
Result: Positive

Epitope: type III secretion system protein YscL (160-175)
Chemical type: Peptide from protein
Sequence: ADVLLLSPKASVSPGG
Position: 160-175
Source molecule (GenBank): NP_220076.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein (305-318)
Chemical type: Peptide from protein
Sequence: IPFAKPDANLSAED
Position: 305-318
Source molecule (GenBank): NP_220136.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein (582-597)
Chemical type: Peptide from protein
Sequence: KAPQFGYPAVQNSADS
Position: 582-597
Source molecule (GenBank): NP_220139.1
Assay category: MhcLigandElution
Result: Positive

Epitope: adenylate cyclase-like protein (312-336)
Chemical type: Peptide from protein
Sequence: KEGEEDTAESAANEEPKAEASQEEE
Position: 312-336
Source molecule (GenBank): NP_220183.1
Assay category: MhcLigandElution
Result: Positive

Epitope: major outer membrane protein (313-330)
Chemical type: Peptide from protein
Sequence: IFDTTTLNPTIAGAGDVK
Position: 313-330
Source molecule (GenBank): NP_220200.1
Assay category: MhcLigandElution
Result: Positive

Epitope: primosomal protein N' (597-610)
Chemical type: Peptide from protein
Sequence: QVFQLITQVTGRSG
Position: 597-610
Source molecule (GenBank): NP_220297.1
Assay category: MhcLigandElution
Result: Positive

Epitope: hypothetical protein (20-35)
Chemical type: Peptide from protein
Sequence: ISYDYSSGNAEASSHN
Position: 20-35
Source molecule (GenBank): NP_220358.1
Assay category: MhcLigandElution
Result: Positive

Epitope: polyribonucleotide nucleotidyltransferase (452-467)
Chemical type: Peptide from protein
Sequence: DAGVPIKAPVAGIAMG
Position: 452-467
Source molecule (GenBank): NP_220363.1
Assay category: MhcLigandElution
Result: Positive

Epitope: outer membrane protein PmpE (428-443)
Chemical type: Peptide from protein
Sequence: GSVVFSGATVNSADFH
Position: 428-443
Source molecule (GenBank): NP_220391.1
Assay category: MhcLigandElution
Result: Positive

Epitope: outer membrane protein PmpG (228-243)
Chemical type: Peptide from protein
Sequence: AMANEAPIAFIANVAG
Position: 228-243
Source molecule (GenBank): NP_220393.1
Assay category: MhcLigandElution
Result: Positive

Epitope: outer membrane protein PmpH (353-373)
Chemical type: Peptide from protein
Sequence: AEKGGGAIYAPTIDISTNGGS
Position: 353-373
Source molecule (GenBank): NP_220394.1
Assay category: MhcLigandElution
Result: Positive