LiteFold/IEDB huggingface dataset:
Reference: Y Eiraku; H Terunuma; M Yagi; X Deng; A J Nicol; M Nieda. "Dendritic cells cross-talk with tumour antigen-specific CD8<sup>+</sup> T cells, Vγ9γδT cells and Vα24NKT cells in patients with glioblastoma multiforme and in healthy donors." Clinical and experimental immunology (2018).

Epitope: CMV pp65 (485-493) A*02:01
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 485-493
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65 (485-493) A*02:01
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 485-493
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65 (353-363) A*01:01
Chemical type: Peptide from protein
Sequence: YSEHPTFTSQY
Position: 353-363
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65 (103-111) A*24:02
Chemical type: Peptide from protein
Sequence: VYALPLKML
Position: 103-111
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Patricia Mercier-Letondal; Chrystel Marton; Marina Deschamps; Christophe Ferrand; Charline Vauchy; Clément Chenut; Aurélie Baguet; Olivier Adotévi; Christophe Borg; Jeanne Galaine; Yann Godet. "Isolation and Characterization of an HLA-DRB1*04-Restricted HPV16-E7 T Cell Receptor for Cancer Immunotherapy." Human gene therapy (2018).

Epitope: HPV16 E7 (70-89)
Chemical type: Peptide from protein
Sequence: QSTHVDIRTLEDLLMGTLGI
Position: 70-89
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E7 (70-89)
Chemical type: Peptide from protein
Sequence: QSTHVDIRTLEDLLMGTLGI
Position: 70-89
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E7 (70-89)
Chemical type: Peptide from protein
Sequence: QSTHVDIRTLEDLLMGTLGI
Position: 70-89
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E7 (70-89)
Chemical type: Peptide from protein
Sequence: QSTHVDIRTLEDLLMGTLGI
Position: 70-89
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E7 (70-89)
Chemical type: Peptide from protein
Sequence: QSTHVDIRTLEDLLMGTLGI
Position: 70-89
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered
Reference: Minying Zhang; Jens Fritsche; Jason Roszik; Leila J Williams; Xinxin Peng; Yulun Chiu; Chih-Chiang Tsou; Franziska Hoffgaard; Valentina Goldfinger; Oliver Schoor; Amjad Talukder; Marie A Forget; Cara Haymaker; Chantale Bernatchez; Leng Han; Yiu-Huen Tsang; Kathleen Kong; Xiaoyan Xu; Kenneth L Scott; Harpreet Singh-Jasuja; Greg Lizee; Han Liang; Toni Weinschenk; Gordon B Mills; Patrick Hwu. "RNA editing derived epitopes function as cancer antigens to elicit immune responses." Nature communications (2018).

Epitope: CCNI-WT9
Chemical type: Peptide from protein
Sequence: LLDRFLATV
Position: 72-80
Source molecule (GenBank): D6RG12.1
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: CCNI-WT10
Chemical type: Peptide from protein
Sequence: SLLDRFLATV
Position: 71-80
Source molecule (GenBank): D6RG12.1
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: CCNI-WT10
Chemical type: Peptide from protein
Sequence: SLLDRFLATV
Position: 71-80
Source molecule (GenBank): D6RG12.1
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: CCNI-ED9
Chemical type: Peptide, no natural source
Sequence: LLDGFLATV
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: COPA-ED10
Chemical type: Peptide, no natural source
Sequence: RVWDVSGLRK
Assay category: MhcLigandElution
Result: Positive

Epitope: CDK13-ED
Chemical type: Peptide, no natural source
Sequence: SPRQPPLLL
Assay category: MhcLigandElution
Result: Positive
Reference: Jennifer M Caron; XiangHua Han; Liangru Contois; Calvin P H Vary; Peter C Brooks. "The HU177 Collagen Epitope Controls Melanoma Cell Migration and Experimental Metastasis by a CDK5/YAP-Dependent Mechanism." The American journal of pathology (2018).

Epitope: Hu177 epitope
Chemical type: Peptide from protein
Sequence: PGFPG
Position: 522-526
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive

Epitope: Hu177 epitope
Chemical type: Peptide from protein
Sequence: PGFPG
Position: 522-526
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive

Epitope: Hu177 epitope
Chemical type: Peptide from protein
Sequence: PGFPG
Position: 522-526
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive

Epitope: Hu177 epitope
Chemical type: Peptide from protein
Sequence: PGFPG
Position: 522-526
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive

Epitope: Hu177 epitope
Chemical type: Peptide from protein
Sequence: PGFPG
Position: 522-526
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive

Epitope: Hu177 epitope
Chemical type: Peptide from protein
Sequence: PGFPG
Position: 522-526
Source molecule (GenBank): Q01955.3
Assay category: BCell
Result: Positive
Reference: Hemant Kumar; Janet S Finer-Moore; Xiaoxu Jiang; Irina Smirnova; Vladimir Kasho; Els Pardon; Jan Steyaert; H Ronald Kaback; Robert M Stroud. "Crystal Structure of a ligand-bound LacY-Nanobody Complex." Proceedings of the National Academy of Sciences of the United States of America (2018).

Epitope: Epitope of nanobody 9047 on LacY
Chemical type: Discontinuous protein residues
Discontinuous residues: K42, N245, T248, S249, F250, F251, A252, T253, G254, F308, A309, T310, S311, Y373, E374, S375, I376, G377, F378, Q379, G380
Source molecule (GenBank): P02920.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.0

Epitope: Epitope of nanobody 9047 on LacY
Chemical type: Discontinuous protein residues
Discontinuous residues: K42, N245, T248, S249, F250, F251, A252, T253, G254, F308, A309, T310, S311, Y373, E374, S375, I376, G377, F378, Q379, G380
Source molecule (GenBank): P02920.1
Assay category: BCell
Result: Positive
Reference: Si Liu; Lingyi Xu; Fenghui Guan; Yun-Tao Liu; Yanxiang Cui; Qing Zhang; Xiang Zheng; Guo-Qiang Bi; Z Hong Zhou; Xiaokang Zhang; Sheng Ye. "Cryo-EM structure of the human α5β3 GABA<sub>A</sub> receptor." Cell research (2018).

Epitope: Epitope of Nb25 on GABA(A) receptor ß3 subunit
Chemical type: Region on multi-chain protein
Discontinuous residues: D: D197, V203, E204, R205, E207, I213; E: L124, N125, M162, M163, D164, E178, R221, V223, V224, F225, A226, R232
Source molecule (GenBank): NP_000805.1
Assay category: BCell
Result: Positive
Reference: Kwang Hoon Sung; Jörn Josewski; Stefan Dübel; Wulf Blankenfeldt; Udo Rau. "Structural insights into antigen recognition of an anti-β-(1,6)-β-(1,3)-D-glucan antibody." Scientific reports (2018).

Epitope: laminarihexaose
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Quantitative measurement: 2.403
Host: F 7 weeks

Epitope: laminarihexaose
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Quantitative measurement: 0.22
Host: F 7 weeks
Reference: Jian Sun; Marcin Paduch; Sang-Ah Kim; Ryan M Kramer; Adam F Barrios; Vincent Lu; Judy Luke; Svitlana Usatyuk; Anthony A Kossiakoff; Song Tan. "Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2." Proceedings of the National Academy of Sciences of the United States of America (2018).

Epitope: Epitope of sAB Fab on Ada2/Gcn5
Chemical type: Region on multi-chain protein
Discontinuous residues: G: Y114, P115; H: F102, R103, V104, M148, D167, H195, D198, Y199, R201, N202, T203, S204, N205, R257, I258, R259, L261, D262, K265, I266, L269
Source molecule (GenBank): Q02336.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.98
Reference: Yi-Lynn Liang; Maryam Khoshouei; Giuseppe Deganutti; Alisa Glukhova; Cassandra Koole; Thomas S Peat; Mazdak Radjainia; Jürgen M Plitzko; Wolfgang Baumeister; Laurence J Miller; Deborah L Hay; Arthur Christopoulos; Christopher A Reynolds; Denise Wootten; Patrick M Sexton. "Cryo-EM structure of the active, G<sub>s</sub>-protein complexed, human CGRP receptor." Nature (2018).

Epitope: Epitope of nanobody Nb35 on G protein heterotrimer of human CGRP receptor complex
Chemical type: Region on multi-chain protein
Discontinuous residues: A: R228, D229, E230, R232, Q262, T263, Q267, K271, L272, S275, N278, N279, D310, Y311, P313, E314; B: R19, T184, C204, D205, A206, T223, H225, E226, S227, D228, D246, D247, I270
Source molecule (GenBank): P63092.1
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody Nb35 on G protein heterotrimer of human CGRP receptor complex
Chemical type: Region on multi-chain protein
Discontinuous residues: A: R228, D229, E230, R232, Q262, T263, Q267, K271, L272, S275, N278, N279, D310, Y311, P313, E314; B: R19, T184, C204, D205, A206, T223, H225, E226, S227, D228, D246, D247, I270
Source molecule (GenBank): P63092.1
Assay category: BCell
Result: Positive
Reference: Kumar Nagarathinam; Yoshiko Nakada-Nakura; Christoph Parthier; Tohru Terada; Narinobu Juge; Frank Jaenecke; Kehong Liu; Yunhon Hotta; Takaaki Miyaji; Hiroshi Omote; So Iwata; Norimichi Nomura; Milton T Stubbs; Mikio Tanabe. "Outward open conformation of a Major Facilitator Superfamily multidrug/H<sup>+</sup> antiporter provides insights into switching mechanism." Nature communications (2018).

Epitope: Epitope of YN1074 Fab on MdfA
Chemical type: Discontinuous protein residues
Discontinuous residues: Q14, A15, Q131, E132, S133, F134, E135, M192, P193, E194, T195, T197, I199, G200, E201, K202, R336, F340
Source molecule (GenBank): P0AEY8.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.4
Reference: Xiuyuan Li; Natalia Sevillano; Florencia La Greca; Jake Hsu; Irimpan I Mathews; Tsutomu Matsui; Charles S Craik; Chaitan Khosla. "Discovery and Characterization of a Thioesterase-Specific Monoclonal Antibody That Recognizes the 6-Deoxyerythronolide B Synthase." Biochemistry (2018).

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive
Quantitative measurement: 2.45

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive
Quantitative measurement: 13.0

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive
Quantitative measurement: 16.0

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive
Quantitative measurement: 300000.0

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0048

Epitope: Epitope of 3A6 Fab on 6-deoxyerythronolide B synthase
Chemical type: Discontinuous protein residues
Discontinuous residues: V2916, S2917, G2918, R2919, D3066, A3070, E3073, E3074, A1201, P3122, M3123, G3124, P3125, W3126, P3127
Source molecule (GenBank): Q03133.4
Assay category: BCell
Result: Negative
Reference: Qing Pan; Jing Wang; Yulong Gao; Hongyu Cui; Changjun Liu; Xiaole Qi; Yanping Zhang; Yongqiang Wang; Xiaomei Wang. "Identification of two novel fowl adenovirus C-specific B cell epitopes using monoclonal antibodies against the capsid hexon protein." Applied microbiology and biotechnology (2018).

Epitope: Hexon (31-40)
Chemical type: Peptide from protein
Sequence: PLAPKESMFN
Position: 128-137
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Negative
Host: F 6 weeks

Epitope: Hexon (31-40)
Chemical type: Peptide from protein
Sequence: PLAPKESMFN
Position: 128-137
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (31-40)
Chemical type: Peptide from protein
Sequence: PLAPKESMFN
Position: 128-137
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (31-40)
Chemical type: Peptide from protein
Sequence: PLAPKESMFN
Position: 128-137
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (79-87)
Chemical type: Peptide from protein
Sequence: KISGVFPNP
Position: 174-182
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (79-87)
Chemical type: Peptide from protein
Sequence: KISGVFPNP
Position: 174-182
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (79-87)
Chemical type: Peptide from protein
Sequence: KISGVFPNP
Position: 174-182
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (79-87)
Chemical type: Peptide from protein
Sequence: KISGVFPNP
Position: 174-182
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Negative
Host: F 6 weeks

Epitope: Hexon (181-190)
Chemical type: Peptide from protein
Sequence: DYDDYNIGTT
Position: 270-279
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Negative
Host: F 6 weeks

Epitope: Hexon (181-190)
Chemical type: Peptide from protein
Sequence: DYDDYNIGTT
Position: 270-279
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (181-190)
Chemical type: Peptide from protein
Sequence: DYDDYNIGTT
Position: 270-279
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Hexon (181-190)
Chemical type: Peptide from protein
Sequence: DYDDYNIGTT
Position: 270-279
Source molecule (GenBank): APA19522.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Wiebke C Abels; Trishna Manandhar; Heike Kunze-Schumacher; Rainer Blasczyk; Christina Bade-Döding. "The polymorphism at residue 156 determines the HLA-B*35 restricted peptide repertoire during HCMV infection." Immunogenetics (2018).

Epitope: HCMV CP 632-643
Chemical type: Peptide from protein
Sequence: VAERAQAGVVNA
Position: 632-643
Source molecule (GenBank): P16753.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HCMV CP 835-850
Chemical type: Peptide from protein
Sequence: ESTSGVTPEDSIAAQR
Position: 835-850
Source molecule (GenBank): P16729.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HCMV pp7 535-549
Chemical type: Peptide from protein
Sequence: SVPAPRPSPISTAST
Position: 535-549
Source molecule (GenBank): NP_040017.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HCMV pp65 495-509
Chemical type: Peptide from protein
Sequence: NLVPMVATVQGQNLK
Position: 495-509
Source molecule (GenBank): P06725.2
Assay category: MhcLigandElution
Result: Positive

Epitope: HCMV pp65 420-435
Chemical type: Peptide from protein
Sequence: VTGGGAMAGASTSAGR
Position: 420-435
Source molecule (GenBank): P06725.2
Assay category: MhcLigandElution
Result: Positive
Reference: Shuang Li; Li Yi; Zhigang Cao; Yuening Cheng; Mingwei Tong; Jianke Wang; Peng Lin; Shipeng Cheng. "Identification of linear B-cell epitopes on the phosphoprotein of canine distemper virus using four monoclonal antibodies." Virus research (2018).

Epitope: Pc7 MAb (E2-9)
Chemical type: Peptide from protein
Sequence: SHGMGIVAGSTN
Position: 238-249
Source molecule (GenBank): ASY08093.1
Assay category: BCell
Result: Positive

Epitope: Pc7 MAb (E2-9)
Chemical type: Peptide from protein
Sequence: SHGMGIVAGSTN
Position: 238-249
Source molecule (GenBank): ASY08093.1
Assay category: BCell
Result: Positive

Epitope: Pc7 MAb (E2-9)
Chemical type: Peptide from protein
Sequence: SHGMGIVAGSTN
Position: 238-249
Source molecule (GenBank): ASY08093.1
Assay category: BCell
Result: Positive

Epitope: Pc7 MAb (E2-9)
Chemical type: Peptide from protein
Sequence: SHGMGIVAGSTN
Position: 238-249
Source molecule (GenBank): ASY08093.1
Assay category: BCell
Result: Positive

Epitope: Pc8 MAb (E6-2)
Chemical type: Peptide from protein
Sequence: GPSVSAENVRQ
Position: 264-274
Source molecule (GenBank): AAG15484.1
Assay category: BCell
Result: Positive

Epitope: Pc8 MAb (E6-2)
Chemical type: Peptide from protein
Sequence: GPSVSAENVRQ
Position: 264-274
Source molecule (GenBank): AAG15484.1
Assay category: BCell
Result: Positive

Epitope: Pc8 MAb (E6-2)
Chemical type: Peptide from protein
Sequence: GPSVSAENVRQ
Position: 264-274
Source molecule (GenBank): AAG15484.1
Assay category: BCell
Result: Positive

Epitope: Pc8 MAb (E6-2)
Chemical type: Peptide from protein
Sequence: GPSVSAENVRQ
Position: 264-274
Source molecule (GenBank): AAG15484.1
Assay category: BCell
Result: Positive
Reference: Pradeep K Rai; Sathi Babu Chodisetti; Sudeep K Maurya; Sajid Nadeem; Weiguang Zeng; Ashok K Janmeja; David C Jackson; Javed N Agrewala. "A lipidated bi-epitope vaccine comprising of MHC-I and MHC-II binder peptides elicits protective CD4 T cell and CD8 T cell immunity against Mycobacterium tuberculosis." Journal of translational medicine (2018).

Epitope: Mtb 16kDa MHC-II peptide
Chemical type: Peptide from protein
Sequence: SEFAYGSFVRTVSLPVGADE
Position: 91-110
Source molecule (GenBank): P0A5B7.2
Assay category: TCell
Result: Positive
Host: F 6-8 weeks

Epitope: Mtb 16kDa MHC-II peptide
Chemical type: Peptide from protein
Sequence: SEFAYGSFVRTVSLPVGADE
Position: 91-110
Source molecule (GenBank): P0A5B7.2
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Mtb 16kDa MHC-II peptide
Chemical type: Peptide from protein
Sequence: SEFAYGSFVRTVSLPVGADE
Position: 91-110
Source molecule (GenBank): P0A5B7.2
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Mtb TB10.4 MHC-I peptide
Chemical type: Peptide from protein
Sequence: GYAGTLQSL
Position: 20-28
Source molecule (GenBank): P0A568.2
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Chiara Camisaschi; Salvatore Lorenzo Renne; Valeria Beretta; Francesca Rini; Rosalin Dolores Spagnuolo; Alessandra Tuccitto; Marta Giorgia Podda; Giorgio Parmiani; Licia Rivoltini; Paola Collini; Chiara Castelli; Roberto Luksch. "Immune landscape and in vivo immunogenicity of NY-ESO-1 tumor antigen in advanced neuroblastoma patients." BMC cancer [electronic resource]. (2018).

Epitope: NY-ESO-1 157−165(V)
Chemical type: Peptide, no natural source
Sequence: SLLMWITQV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 157−165(V)
Chemical type: Peptide, no natural source
Sequence: SLLMWITQV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 157−165(V)
Chemical type: Peptide, no natural source
Sequence: SLLMWITQV
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 157−165(V)
Chemical type: Peptide, no natural source
Sequence: SLLMWITQV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 157−165(V)
Chemical type: Peptide, no natural source
Sequence: SLLMWITQV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Gwendolin S Simper; Gia-Gia T Hò; Alexander A Celik; Trevor Huyton; Joachim Kuhn; Heike Kunze-Schumacher; Rainer Blasczyk; Christina Bade-Döding. "Carbamazepine-Mediated Adverse Drug Reactions: CBZ-10,11-epoxide but Not Carbamazepine Induces the Alteration of Peptides Presented by HLA-B∗15:02." Journal of immunology research (2018).

Epitope: ARDqLVESLAQ
Chemical type: Peptide from protein
Sequence: ARDQLVESLAQ
Position: 888-898
Source molecule (GenBank): Q6F5E8.2
Assay category: MhcLigandElution
Result: Positive

Epitope: VSQqKLQAEAQ
Chemical type: Peptide from protein
Sequence: VSQQKLQAEAQ
Position: 365-375
Source molecule (GenBank): NP_001289383.1
Assay category: MhcLigandElution
Result: Positive
Reference: A D Bitmansour; S L Waldrop; C J Pitcher; E Khatamzas; F Kern; V C Maino; L J Picker. "Clonotypic structure of the human CD4+ memory T cell response to cytomegalovirus." Journal of immunology (Baltimore, Md. : 1950) (2001).

Epitope: HCMV pp65 (489-503)
Chemical type: Peptide from protein
Sequence: AGILARNLVPMVATV
Position: 489-503
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCMV pp65 (509-523)
Chemical type: Peptide from protein
Sequence: KYQEFFWDANDIYRI
Position: 509-523
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCMV pp65 (507-521)
Chemical type: Peptide from protein
Sequence: NLKYQEFFWDANDIY
Position: 507-521
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCMV pp65 (417-431)
Chemical type: Peptide from protein
Sequence: TPRVTGGGAMAGAST
Position: 417-431
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCMV pp65 (177-191)
Chemical type: Peptide from protein
Sequence: EPDVYYTSAFVFPTK
Position: 177-191
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCMV pp65 (285-299)
Chemical type: Peptide from protein
Sequence: GKISHIMLDVAFTSH
Position: 285-299
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo