Reference: Chungyong Han; Ai Kawana-Tachikawa; Akihisa Shimizu; Dayong Zhu; Hitomi Nakamura; Eisuke Adachi; Tadashi Kikuchi; Michiko Koga; Tomohiko Koibuchi; George F Gao; Yusuke Sato; Atsushi Yamagata; Eric Martin; Shuya Fukai; Zabrina L Brumme; Aikichi Iwamoto. "Switching and emergence of CTL epitopes in HIV-1 infection." Retrovirology (2014).

Epitope: Nef 126-10(8I10F)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRF
Position: 129-138
Source molecule (GenBank): P04603.3
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 126-10(8I10F)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRF
Position: 129-138
Source molecule (GenBank): P04603.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.66

Epitope: Nef 126-10(8I10F)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRF
Position: 129-138
Source molecule (GenBank): P04603.3
Assay category: MhcBinding
Result: Positive

Epitope: Nef 126-10(8T10F)
Chemical type: Peptide from protein
Sequence: NYTPGPGTRF
Position: 126-135
Source molecule (GenBank): BAA86664.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 126-10(8T10F)
Chemical type: Peptide from protein
Sequence: NYTPGPGTRF
Position: 126-135
Source molecule (GenBank): BAA86664.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.0

Epitope: Nef 126-10(8T10F)
Chemical type: Peptide from protein
Sequence: NYTPGPGTRF
Position: 126-135
Source molecule (GenBank): BAA86664.1
Assay category: MhcBinding
Result: Positive

Epitope: Nef 126-10(wt)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRY
Position: 126-135
Source molecule (GenBank): P03404.4
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Nef 126-10(wt)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRY
Position: 126-135
Source molecule (GenBank): P03404.4
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 126-10(wt)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRY
Position: 126-135
Source molecule (GenBank): P03404.4
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 126-10(wt)
Chemical type: Peptide from protein
Sequence: NYTPGPGIRY
Position: 126-135
Source molecule (GenBank): P03404.4
Assay category: MhcBinding
Result: Positive-Low

Epitope: Nef 134-10(wt)
Chemical type: Peptide from protein
Sequence: RYPLTFGWCF
Position: 134-143
Source molecule (GenBank): Q9YYU8.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Nef 134-10(wt)
Chemical type: Peptide from protein
Sequence: RYPLTFGWCF
Position: 134-143
Source molecule (GenBank): Q9YYU8.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 134-10(wt)
Chemical type: Peptide from protein
Sequence: RYPLTFGWCF
Position: 134-143
Source molecule (GenBank): Q9YYU8.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 134-10(wt)
Chemical type: Peptide from protein
Sequence: RYPLTFGWCF
Position: 134-143
Source molecule (GenBank): Q9YYU8.1
Assay category: MhcBinding
Result: Positive

Epitope: Nef 134-10(F2)
Chemical type: Peptide from protein
Sequence: RFPLTFGWCF
Position: 134-143
Source molecule (GenBank): BAA86664.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Nef 134-10(F2)
Chemical type: Peptide from protein
Sequence: RFPLTFGWCF
Position: 134-143
Source molecule (GenBank): BAA86664.1
Assay category: MhcBinding
Result: Positive

Epitope: VPLDKDFRKY
Chemical type: Peptide from protein
Sequence: VPLDKDFRKY
Position: 695-704
Source molecule (GenBank): BAC02541.1
Assay category: MhcBinding
Result: Negative

Epitope: Gag28-9
Chemical type: Peptide from protein
Sequence: KYKLKHIVW
Position: 28-36
Source molecule (GenBank): BAA00992.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo