LiteFold/IEDB huggingface dataset:
Reference: Ana C Maretti-Mira; Matthew P Salomon; Angela M Hsu; Chikako Matsuba; Lucy Golden-Mason. "Chronic HCV infection promotes cytotoxicity in antigen-specific CD8<sup>+</sup> T cells regardless of virus specificity." Frontiers in virology (Lausanne, Switzerland) (2023).

Epitope: HCV NS3:1435–1443
Chemical type: Peptide from protein
Sequence: ATDALMTGY
Position: 1437-1445
Source molecule (GenBank): B0YMZ7.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS3:1435–1443
Chemical type: Peptide from protein
Sequence: ATDALMTGY
Position: 1437-1445
Source molecule (GenBank): B0YMZ7.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS5:2594–2602
Chemical type: Peptide from protein
Sequence: ALYDVVTKL
Position: 2594-2602
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HCV NS5:2594–2602
Chemical type: Peptide from protein
Sequence: ALYDVVTKL
Position: 2594-2602
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65:495–504
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65:495–504
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Influenza MP 58–66
Chemical type: Peptide from protein
Sequence: GILGFVFTL
Position: 58-66
Source molecule (GenBank): P03485.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Influenza MP 58–66
Chemical type: Peptide from protein
Sequence: GILGFVFTL
Position: 58-66
Source molecule (GenBank): P03485.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Benjamin A Kansy; Tim P Wehrs; Kirsten Bruderek; Yu Si; Sonja Ludwig; Freya Droege; Pia Hasskamp; Uta Henkel; Nina Dominas; Thomas K Hoffmann; Peter A Horn; Martin Schuler; Thomas C Gauler; Monika Lindemann; Stephan Lang; Agnes Bankfalvi; Sven Brandau. "HPV-associated head and neck cancer is characterized by distinct profiles of CD8<sup>+</sup> T cells and myeloid-derived suppressor cells." Cancer immunology, immunotherapy : CII (2023).

Epitope: HPV E7 11-20
Chemical type: Peptide from protein
Sequence: YMLDLQPETT
Position: 11-20
Source molecule (GenBank): P03129
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HPV E7 11-20
Chemical type: Peptide from protein
Sequence: YMLDLQPETT
Position: 11-20
Source molecule (GenBank): P03129
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Jian Guan; Stephanie M Bywaters; Sarah A Brendle; Robert E Ashley; Alexander M Makhov; James F Conway; Neil D Christensen; Susan Hafenstein. "High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16." Viruses (2017).

Epitope: Epitope of U4 Fab on HPV16 L1
Chemical type: Region on multi-chain protein
Discontinuous residues: C: T176, N177, A179, V180; D: H431, K437
Source molecule (GenBank): P03101.3
Assay category: BCell
Result: Positive

Epitope: Epitope of U4 Fab on HPV16 L1
Chemical type: Region on multi-chain protein
Discontinuous residues: C: T176, N177, A179, V180; D: H431, K437
Source molecule (GenBank): P03101.3
Assay category: BCell
Result: Positive

Epitope: Epitope of V5 Fab on HPV16 L1
Chemical type: Region on multi-chain protein
Discontinuous residues: M: P55, D142, N143, I348, N357, T358, K361; N: N138, A139, G140, N181, P182, V267, K278, S280, G281, S282, N285
Source molecule (GenBank): P03101.3
Assay category: BCell
Result: Positive

Epitope: Epitope of V5 Fab on HPV16 L1
Chemical type: Region on multi-chain protein
Discontinuous residues: M: P55, D142, N143, I348, N357, T358, K361; N: N138, A139, G140, N181, P182, V267, K278, S280, G281, S282, N285
Source molecule (GenBank): P03101.3
Assay category: BCell
Result: Positive
Reference: Fanli Yang; Sheng Lin; Fei Ye; Jing Yang; Jianxun Qi; Zhujun Chen; Xi Lin; Jichao Wang; Dan Yue; Yanwei Cheng; Zimin Chen; Hua Chen; Yu You; Zhonglin Zhang; Yu Yang; Ming Yang; Honglu Sun; Yuhua Li; Yu Cao; Shengyong Yang; Yuquan Wei; George F Gao; Guangwen Lu. "Structural Analysis of Rabies Virus Glycoprotein Reveals pH-Dependent Conformational Changes and Interactions with a Neutralizing Antibody." Cell host & microbe (2020).

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.9

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive
Quantitative measurement: 13.4

Epitope: Epitope of scFv 523-11 on RABV-G
Chemical type: Discontinuous protein residues
Discontinuous residues: R352, T353, N355, E356, I358, P359, S360, K361, C363, K365, G368, R369, C370, D387, H389, V390, M395, L399
Source molecule (GenBank): ADJ29911.1
Assay category: BCell
Result: Positive
Reference: Yingying Li; Yida Gao; Yichao Wang; Yuying Duan; Yang Fu; Huanhuan Yang; Jun Xi. "Localization of an IgE epitope of glycinin A2 peptide chain." Journal of the science of food and agriculture (2024).

Epitope: A2-3-B
Chemical type: Peptide from protein
Sequence: AIVTVKGGLRVTAPAMRKPQQEEDDDDEEEQPQCVE
Position: 251-286
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Positive

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: AIVTVKGGLRVTAPAM
Position: 251-266
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Negative

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: AIVTVKGGLRVTAPAM
Position: 251-266
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Negative

Epitope: Peptide 2
Chemical type: Peptide from protein
Sequence: VTAPAMRKPQQEEDDD
Position: 261-276
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Negative

Epitope: Peptide 2
Chemical type: Peptide from protein
Sequence: VTAPAMRKPQQEEDDD
Position: 261-276
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Negative

Epitope: Peptide 3
Chemical type: Peptide from protein
Sequence: QEEDDDDEEEQPQCVE
Position: 271-286
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Positive

Epitope: Peptide 3
Chemical type: Peptide from protein
Sequence: QEEDDDDEEEQPQCVE
Position: 271-286
Source molecule (GenBank): P04405.2
Assay category: BCell
Result: Positive
Reference: Bao Tuan Duong; Seon Ju Yeo; Hyun Park. "Identification of specific neutralizing antibodies for highly pathogenic avian influenza H5 2.3.4.4b clades to facilitate vaccine design and therapeutics." Emerging microbes & infections (2024).

Epitope: Epitope of mAb #11.4 on H5N6 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: S136, P139, N140, E142, T143
Source molecule (GenBank): AVI14592.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.000007397
Host: F 8 weeks

Epitope: Epitope of mAb #11.4 on H5N6 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: S136, P139, N140, E142, T143
Source molecule (GenBank): AVI14592.1
Assay category: BCell
Result: Positive
Quantitative measurement: 9769.0
Host: F 8 weeks

Epitope: Epitope of mAb #11.4 on H5N6 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: S136, P139, N140, E142, T143
Source molecule (GenBank): AVI14592.1
Assay category: BCell
Result: Positive
Host: F 8 weeks

Epitope: Epitope of mAb #11.4 on H5N6 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: S136, P139, N140, E142, T143
Source molecule (GenBank): AVI14592.1
Assay category: BCell
Result: Positive
Host: F 8 weeks

Epitope: Epitope of mAb #11.4 on H5N6 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: S136, P139, N140, E142, T143
Source molecule (GenBank): AVI14592.1
Assay category: BCell
Result: Positive
Host: F 8 weeks

Epitope: Epitope of mAb #11.4 on H5N6 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: S136, P139, N140, E142, T143
Source molecule (GenBank): AVI14592.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.7572
Host: F 8 weeks
Reference: Jingjing Gao; Miao Gui; Ye Xiang. "Structural intermediates in the low pH-induced transition of influenza hemagglutinin." PLoS pathogens (2020).

Epitope: Epitope of F005-126 Fab on Influenza H3 HA
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T64, G65, S107, K108, R285, S286, D287, A288, P289, P300, N301; E: N187, D188, N189, P255, G256
Source molecule (GenBank): Q91MA7.1
Assay category: BCell
Result: Positive
Host:  40 years

Epitope: Epitope of F005-126 Fab on Influenza H3 HA
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T64, G65, S107, K108, R285, S286, D287, A288, P289, P300, N301; E: N187, D188, N189, P255, G256
Source molecule (GenBank): Q91MA7.1
Assay category: BCell
Result: Positive
Host:  40 years

Epitope: Epitope of F005-126 Fab on Influenza H3 HA
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T64, G65, S107, K108, R285, S286, D287, A288, P289, P300, N301; E: N187, D188, N189, P255, G256
Source molecule (GenBank): Q91MA7.1
Assay category: BCell
Result: Positive
Host:  40 years

Epitope: Epitope of F005-126 Fab on Influenza H3 HA
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T64, G65, S107, K108, R285, S286, D287, A288, P289, P300, N301; E: N187, D188, N189, P255, G256
Source molecule (GenBank): Q91MA7.1
Assay category: BCell
Result: Positive
Host:  40 years

Epitope: Epitope of F005-126 Fab on Influenza H3 HA
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T64, G65, S107, K108, R285, S286, D287, A288, P289, P300, N301; E: N187, D188, N189, P255, G256
Source molecule (GenBank): Q91MA7.1
Assay category: BCell
Result: Positive
Host:  40 years
Reference: Mianmian Yin; Jennifer A Smith; Marissa Chou; Jackie Chan; Yingyos Jittayasothorn; Douglas B Gould; Rachel R Caspi; Mark S Anderson; Anthony L DeFranco. "Tracking the role of Aire in immune tolerance to the eye with a TCR transgenic mouse model." Proceedings of the National Academy of Sciences of the United States of America (2024).

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: lymph node
Culture conditions: Engineered

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: eye
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: QTWEGSGVLPCVG
Position: 294-306
Source molecule (GenBank): AAT81142.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Katherine E Irwin; Pei Jasin; Kerstin E Braunstein; Irika R Sinha; Mark A Garret; Kyra D Bowden; Koping Chang; Juan C Troncoso; Abhay Moghekar; Esther S Oh; Denitza Raitcheva; Dan Bartlett; Timothy Miller; James D Berry; Bryan J Traynor; Jonathan P Ling; Philip C Wong. "A fluid biomarker reveals loss of TDP-43 splicing repression in presymptomatic ALS-FTD." Nature medicine (2024).

Epitope: HDGFL2 WT Ab epitope
Chemical type: Peptide from protein
Sequence: AEVYTRLKSRVLGPKIEAVQ
Position: 540-559
Source molecule (GenBank): Q7Z4V5.1
Assay category: BCell
Result: Positive
Reference: Junli Wang; Baishi Lei; Wuchao Zhang; Lijie Li; Jiashuang Ji; Mandi Liu; Kuan Zhao; Wanzhe Yuan. "Preparation of Monoclonal Antibodies against the Capsid Protein and Development of an Epitope-Blocking Enzyme-Linked Immunosorbent Assay for Detection of the Antibody against Porcine Circovirus 3." Animals : an open access journal from MDPI (2024).

Epitope: mAb_7E3 Epitope
Chemical type: Peptide from protein
Sequence: DLDGAW
Position: 110-115
Source molecule (GenBank): QEL09199.1
Assay category: BCell
Result: Positive

Epitope: mAb_7E3 Epitope
Chemical type: Peptide from protein
Sequence: DLDGAW
Position: 110-115
Source molecule (GenBank): QEL09199.1
Assay category: BCell
Result: Positive

Epitope: mAb_7E3 Epitope
Chemical type: Peptide from protein
Sequence: DLDGAW
Position: 110-115
Source molecule (GenBank): QEL09199.1
Assay category: BCell
Result: Positive
Reference: Panpan Tian; Zhuoya Sun; Mengxiang Wang; Jinxing Song; Junru Sun; Lei Zhou; Dawei Jiang; Angke Zhang; Yanan Wu; Gaiping Zhang. "Identification of a novel linear B-cell epitope on the p30 protein of African swine fever virus using monoclonal antibodies." Virus research (2024).

Epitope: Epitope of mAb 1B4G2-4 on ASFV p30
Chemical type: Peptide from protein
Sequence: HNFIQTI
Position: 164-170
Source molecule (GenBank): AYW34064.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb 1B4G2-4 on ASFV p30
Chemical type: Peptide from protein
Sequence: HNFIQTI
Position: 164-170
Source molecule (GenBank): AYW34064.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb 1B4G2-4 on ASFV p30
Chemical type: Peptide from protein
Sequence: HNFIQTI
Position: 164-170
Source molecule (GenBank): AYW34064.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb 1B4G2-4 on ASFV p30
Chemical type: Peptide from protein
Sequence: HNFIQTI
Position: 164-170
Source molecule (GenBank): AYW34064.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb 1B4G2-4 on ASFV p30
Chemical type: Peptide from protein
Sequence: HNFIQTI
Position: 164-170
Source molecule (GenBank): AYW34064.1
Assay category: BCell
Result: Positive
Reference: Pan Wu; Chenglong Rao; Wenzheng Liu; Ziyuan Zhang; Dongqi Nan; Jiangao Chen; Minyang Wang; Yuan Wen; Jingmin Yan; Juanjuan Yue; Xuhu Mao; Qian Li. "Anti-Hcp1 Monoclonal Antibody Is Protective against  Infection via Recognizing Amino Acids at Asp95-Leu114." Pathogens (Basel, Switzerland) (2023).

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Quantitative measurement: 8.22
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0005865
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Quantitative measurement: 71400.0
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Host:  5-6 weeks

Epitope: Epitope of mAb 13F1 on B. pseudomallei Hcp1
Chemical type: Peptide from protein
Sequence: DTTGGDLTELLFTYKFEKVL
Position: 95-114
Source molecule (GenBank): AFR19936.1
Assay category: BCell
Result: Positive
Host:  5-6 weeks
Reference: Yogita Gupta; Manoj Baranwal; Bhupendra Chudasama. "Zika virus precursor membrane peptides induce immune response in peripheral blood mononuclear cells." Human immunology (2024).

Epitope: MP1
Chemical type: Peptide from protein
Sequence: CWCNTTSTWVVYGTCHHKK
Position: 189-207
Source molecule (GenBank): Q32ZE1.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MP1
Chemical type: Peptide from protein
Sequence: CWCNTTSTWVVYGTCHHKK
Position: 189-207
Source molecule (GenBank): Q32ZE1.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MP2
Chemical type: Peptide from protein
Sequence: YIQIMDLGHMCDATMSYECPML
Position: 35-56
Source molecule (GenBank): YP_009430298.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MP2
Chemical type: Peptide from protein
Sequence: YIQIMDLGHMCDATMSYECPML
Position: 35-56
Source molecule (GenBank): YP_009430298.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MP3
Chemical type: Peptide from protein
Sequence: LIRVENWIFRNPGFALAAAA
Position: 29-48
Source molecule (GenBank): YP_009430299.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MP3
Chemical type: Peptide from protein
Sequence: LIRVENWIFRNPGFALAAAA
Position: 29-48
Source molecule (GenBank): YP_009430299.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Hangjie Zhang; Wenling Xiao; Min Zhao; Yongli Zhang; Dan Lu; Shuangshuang Lu; Qingxu Zhang; Weiyu Peng; Liumei Shu; Jie Zhang; Sai Liu; Kexin Zong; Pengyan Wang; Beiwei Ye; Danni Zhang; Shihua Li; Shuguang Tan; Peipei Liu; Yingze Zhao; Fuping Zhang; Huanyu Wang; Xuancheng Lu; George F Gao; Jun Liu. "Characterization of CD8<sup>+</sup> T cells in immune-privileged organs of ZIKV-infected <sup>-/-</sup> mice." Journal of virology (2024).

Epitope: E294-302
Chemical type: Peptide from protein
Sequence: IGVSNRDFV
Position: 294-302
Source molecule (GenBank): KX266255
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: T cell CD8+
Tissue: brain
Culture conditions: Direct Ex Vivo
Reference: Sang-Hoon Kim; Jihye Kim; Sungmin Jung; Ji Yun Noh; Jinnam Kim; Heedo Park; Young Goo Song; Kyong Ran Peck; Su-Hyung Park; Man-Seong Park; Jae-Hoon Ko; Joon Young Song; Jun Yong Choi; Min Kyung Jung; Eui-Cheol Shin. "Omicron BA.2 breakthrough infection elicits CD8<sup>+</sup> T cell responses recognizing the spike of later Omicron subvariants." Science immunology (2024).

Epitope: BA.2_S669
Chemical type: Peptide from protein
Sequence: GICASYQTQTKSHRR
Position: 666-680
Source molecule (GenBank): URA46263.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BA.2_S945
Chemical type: Peptide from protein
Sequence: LGKLQDVVNHNAQAL
Position: 942-956
Source molecule (GenBank): URA46263.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BA.2_S969
Chemical type: Peptide from protein
Sequence: KFGAISSVLNDILSR
Position: 966-980
Source molecule (GenBank): URA46263.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Wuhan-Hu-1_S669
Chemical type: Peptide from protein
Sequence: GICASYQTQTNSPRR
Position: 669-683
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Wuhan-Hu-1_S945
Chemical type: Peptide from protein
Sequence: LGKLQDVVNQNAQAL
Position: 945-959
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Wuhan-Hu-1_S969
Chemical type: Peptide from protein
Sequence: NFGAISSVLNDILSR
Position: 969-983
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated