Reference: Ellen Shrock; Eric Fujimura; Tomasz Kula; Richard T Timms; I-Hsiu Lee; Yumei Leng; Matthew L Robinson; Brandon M Sie; Mamie Z Li; Yuezhou Chen; Jennifer Logue; Adam Zuiani; Denise McCulloch; Felipe J N Lelis; Stephanie Henson; Daniel R Monaco; Meghan Travers; Shaghayegh Habibi; William A Clarke; Patrizio Caturegli; Oliver Laeyendecker; Alicja Piechocka-Trocha; Jonathan Z Li; Ashok Khatri; Helen Y Chu; Alexandra-Chloé Villani; Kyle Kays; Marcia B Goldberg; Nir Hacohen; Michael R Filbin; Xu G Yu; Bruce D Walker; Duane R Wesemann; H Benjamin Larman; James A Lederer; Stephen J Elledge. "Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity." Science (New York, N.Y.) (2020).

Epitope: SARS-CoV2 ORF1
Chemical type: Peptide from protein
Sequence: KSFDLGDELGTDPYEDFQENWNTKH
Position: 141-165
Source molecule (GenBank): QHD43415.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 ORF1
Chemical type: Peptide from protein
Sequence: KSFDLGDELGTDPYEDFQENWNTKH
Position: 141-165
Source molecule (GenBank): QHD43415.1
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 ORF3a
Chemical type: Peptide from protein
Sequence: GDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHS
Position: 172-205
Source molecule (GenBank): QHD43417.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 ORF3a
Chemical type: Peptide from protein
Sequence: GDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHS
Position: 172-205
Source molecule (GenBank): QHD43417.1
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 N2
Chemical type: Peptide from protein
Sequence: LLLLDRLNQLESKMSGKGQQQQGQ
Position: 221-244
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 N2
Chemical type: Peptide from protein
Sequence: LLLLDRLNQLESKMSGKGQQQQGQ
Position: 221-244
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Negative
Host:  18-85 years

Epitope: SARS-CoV2 N3
Chemical type: Peptide from protein
Sequence: KGQQQQGQTVTKKSAAEASKKPRQ
Position: 237-260
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 N3
Chemical type: Peptide from protein
Sequence: KGQQQQGQTVTKKSAAEASKKPRQ
Position: 237-260
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Negative
Host:  18-85 years

Epitope: SARS-CoV2 N4
Chemical type: Peptide from protein
Sequence: DAYKTFPPTEPKKDKKKKADETQA
Position: 358-381
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 N4
Chemical type: Peptide from protein
Sequence: DAYKTFPPTEPKKDKKKKADETQA
Position: 358-381
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 N5
Chemical type: Peptide from protein
Sequence: LPQRQKKQQTVTLLPAADLDDFSK
Position: 382-405
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Negative
Host:  18-85 years

Epitope: SARS-CoV2 N5
Chemical type: Peptide from protein
Sequence: LPQRQKKQQTVTLLPAADLDDFSK
Position: 382-405
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S1
Chemical type: Peptide from protein
Sequence: TGTGVLTESNKKFLPFQQFGRDIA
Position: 547-570
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S1
Chemical type: Peptide from protein
Sequence: TGTGVLTESNKKFLPFQQFGRDIA
Position: 547-570
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative
Host:  18-85 years

Epitope: SARS-CoV2 S2
Chemical type: Peptide from protein
Sequence: FAQVKQIYKTPPIKDFGGFNFSQI
Position: 782-805
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S2
Chemical type: Peptide from protein
Sequence: FAQVKQIYKTPPIKDFGGFNFSQI
Position: 782-805
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 S3
Chemical type: Peptide from protein
Sequence: PDPSKPSKRSFIEDLLFNKVTLAD
Position: 807-830
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S3
Chemical type: Peptide from protein
Sequence: PDPSKPSKRSFIEDLLFNKVTLAD
Position: 807-830
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 S4
Chemical type: Peptide from protein
Sequence: YDPLQPELDSFKEELDKYFKNHTS
Position: 1138-1161
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S4
Chemical type: Peptide from protein
Sequence: YDPLQPELDSFKEELDKYFKNHTS
Position: 1138-1161
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 S4
Chemical type: Peptide from protein
Sequence: YDPLQPELDSFKEELDKYFKNHTS
Position: 1138-1161
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S5
Chemical type: Peptide from protein
Sequence: CCSCGSCCKFDEDDSEPVLKGVKL
Position: 1247-1270
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 S5
Chemical type: Peptide from protein
Sequence: CCSCGSCCKFDEDDSEPVLKGVKL
Position: 1247-1270
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low
Host:  18-85 years

Epitope: SARS-CoV2 S5
Chemical type: Peptide from protein
Sequence: CCSCGSCCKFDEDDSEPVLKGVKL
Position: 1247-1270
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 epitope 1
Chemical type: Peptide from protein
Sequence: NKKFLPFQQ
Position: 556-564
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 epitope 1
Chemical type: Peptide from protein
Sequence: NKKFLPFQQ
Position: 556-564
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 epitope 2
Chemical type: Peptide from protein
Sequence: IAVEQDKN
Position: 770-777
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 epitope 2
Chemical type: Peptide from protein
Sequence: IAVEQDKN
Position: 770-777
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 epitope 4
Chemical type: Peptide from protein
Sequence: FKEELDKYFK
Position: 1148-1157
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 epitope 4
Chemical type: Peptide from protein
Sequence: FKEELDKYFK
Position: 1148-1157
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E1
Chemical type: Peptide from protein
Sequence: EVRQIAPGQT
Position: 406-415
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low

Epitope: E1
Chemical type: Peptide from protein
Sequence: EVRQIAPGQT
Position: 406-415
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E2
Chemical type: Peptide from protein
Sequence: QTGKIADYNYKLPD
Position: 414-427
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E2
Chemical type: Peptide from protein
Sequence: QTGKIADYNYKLPD
Position: 414-427
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E3
Chemical type: Peptide from protein
Sequence: YNYKLPDDFT
Position: 421-430
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E3
Chemical type: Peptide from protein
Sequence: YNYKLPDDFT
Position: 421-430
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E4
Chemical type: Peptide from protein
Sequence: KLPD
Position: 424-427
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E4
Chemical type: Peptide from protein
Sequence: KLPD
Position: 424-427
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E5
Chemical type: Peptide from protein
Sequence: NSNNLDSKVGGN
Position: 437-448
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E5
Chemical type: Peptide from protein
Sequence: NSNNLDSKVGGN
Position: 437-448
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E6
Chemical type: Peptide from protein
Sequence: RLFRKSNLKP
Position: 454-463
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E6
Chemical type: Peptide from protein
Sequence: RLFRKSNLKP
Position: 454-463
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E7
Chemical type: Peptide from protein
Sequence: NLKPFERD
Position: 460-467
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E7
Chemical type: Peptide from protein
Sequence: NLKPFERD
Position: 460-467
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E8
Chemical type: Peptide from protein
Sequence: PCNGVEGFNC
Position: 479-488
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low

Epitope: E8
Chemical type: Peptide from protein
Sequence: PCNGVEGFNC
Position: 479-488
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E9
Chemical type: Peptide from protein
Sequence: GYQP
Position: 504-507
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E9
Chemical type: Peptide from protein
Sequence: GYQP
Position: 504-507
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low

Epitope: E10
Chemical type: Peptide from protein
Sequence: SFELL
Position: 514-518
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E10
Chemical type: Peptide from protein
Sequence: SFELL
Position: 514-518
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low

Epitope: SARS-CoV2 NP 34-47
Chemical type: Peptide from protein
Sequence: GARSKQRRPQGLPN
Position: 34-47
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 34-47
Chemical type: Peptide from protein
Sequence: GARSKQRRPQGLPN
Position: 34-47
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 47-56
Chemical type: Peptide from protein
Sequence: NNTASWFTAL
Position: 47-56
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 NP 47-56
Chemical type: Peptide from protein
Sequence: NNTASWFTAL
Position: 47-56
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive-Low

Epitope: SARS-CoV2 NP 161-171
Chemical type: Peptide from protein
Sequence: LPQGTTLPKGF
Position: 161-171
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 161-171
Chemical type: Peptide from protein
Sequence: LPQGTTLPKGF
Position: 161-171
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 363-408
Chemical type: Peptide from protein
Sequence: FPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQ
Position: 363-408
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 363-408
Chemical type: Peptide from protein
Sequence: FPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQ
Position: 363-408
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: E12
Chemical type: Peptide from protein
Sequence: ASVYAWNRKR
Position: 348-357
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E12
Chemical type: Peptide from protein
Sequence: ASVYAWNRKR
Position: 348-357
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E13
Chemical type: Peptide from protein
Sequence: AWNRKR
Position: 352-357
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E13
Chemical type: Peptide from protein
Sequence: AWNRKR
Position: 352-357
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: E14
Chemical type: Peptide from protein
Sequence: RKRISNCV
Position: 355-362
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: E14
Chemical type: Peptide from protein
Sequence: RKRISNCV
Position: 355-362
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 207-244
Chemical type: Peptide from protein
Sequence: PARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQ
Position: 207-244
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 207-244
Chemical type: Peptide from protein
Sequence: PARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQ
Position: 207-244
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 247-259
Chemical type: Peptide from protein
Sequence: TKKSAAEASKKPR
Position: 247-259
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2 NP 247-259
Chemical type: Peptide from protein
Sequence: TKKSAAEASKKPR
Position: 247-259
Source molecule (GenBank): QHD43423.2
Assay category: BCell
Result: Positive-Low

Epitope: SARS-CoV-2 Spike 760-788
Chemical type: Peptide from protein
Sequence: CTQLNRALTGIAVEQDKNTQEVFAQVKQI
Position: 760-788
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV-2 Spike 1135-1165
Chemical type: Peptide from protein
Sequence: NTVYDPLQPELDSFKEELDKYFKNHTSPDVD
Position: 1135-1165
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV-2 Spike 769-780
Chemical type: Peptide from protein
Sequence: GIAVEQDKNTQE
Position: 769-780
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV-2 Spike 769-780
Chemical type: Peptide from protein
Sequence: GIAVEQDKNTQE
Position: 769-780
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV-2 Spike 779-814
Chemical type: Peptide from protein
Sequence: QEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK
Position: 779-814
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive-Low

Epitope: SARS-CoV-2 Spike 779-814
Chemical type: Peptide from protein
Sequence: QEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSK
Position: 779-814
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV-2 Spike 815-826
Chemical type: Peptide from protein
Sequence: RSFIEDLLFNKV
Position: 815-826
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV-2 Spike 815-826
Chemical type: Peptide from protein
Sequence: RSFIEDLLFNKV
Position: 815-826
Source molecule (GenBank): QKE11719.1
Assay category: BCell
Result: Positive