LiteFold/IEDB huggingface dataset:
Reference: Martina Milighetti; Yanchun Peng; Cedric Tan; Michal Mark; Gayathri Nageswaran; Suzanne Byrne; Tahel Ronel; Tom Peacock; Andreas Mayer; Aneesh Chandran; Joshua Rosenheim; Matthew Whelan; Xuan Yao; Guihai Liu; Suet Ling Felce; Tao Dong; Alexander J Mentzer; Julian C Knight; Francois Balloux; Erez Greenstein; Shlomit Reich-Zeliger; Corinna Pade; Joseph M Gibbons; Amanda Semper; Tim Brooks; Ashley Otter; Daniel M Altmann; Rosemary J Boyton; Mala K Maini; Aine McKnight; Charlotte Manisty; Thomas A Treibel; James C Moon; Mahdad Noursadeghi; Benny Chain. "Large clones of pre-existing T cells drive early immunity against SARS-COV-2 and LCMV infection." iScience (2023).

Epitope: LCMV NP 396-404
Chemical type: Peptide from protein
Sequence: FQPQNGQFI
Position: 396-404
Source molecule (GenBank): AAL01686.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV NP 205-212
Chemical type: Peptide from protein
Sequence: YTVKYPNL
Position: 205-212
Source molecule (GenBank): AAL01686.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV GP 92-101
Chemical type: Peptide from protein
Sequence: CSANNSHHYI
Position: 92-101
Source molecule (GenBank): AAA46256.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV GP 66–77
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): AAA46256.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: CoV-2 N 105-113
Chemical type: Peptide from protein
Sequence: SPRWYFYYL
Position: 105-113
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Michal Mark; Shlomit Reich-Zeliger; Erez Greenstein; Adi Biram; Benny Chain; Nir Friedman; Asaf Madi. "Viral infection reveals hidden sharing of TCR CDR3 sequences between individuals." Frontiers in immunology (2023).

Epitope: GP 66-77
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): P09991.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 205-212
Chemical type: Peptide from protein
Sequence: YTVKYPNL
Position: 205-212
Source molecule (GenBank): P09992.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GP 92-101
Chemical type: Peptide from protein
Sequence: CSANNSHHYI
Position: 92-101
Source molecule (GenBank): P09991.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 396-404
Chemical type: Peptide from protein
Sequence: FQPQNGQFI
Position: 396-404
Source molecule (GenBank): P09992.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Robert Stass; Taylor B Engdahl; Nathaniel S Chapman; Rachael M Wolters; Laura S Handal; Summer M Diaz; James E Crowe; Thomas A Bowden. "Mechanistic basis for potent neutralization of Sin Nombre hantavirus by a human monoclonal antibody." Nature microbiology (2023).

Epitope: Epitope of Fab SNV-42 on GnH of SNV
Chemical type: Discontinuous protein residues
Discontinuous residues: S88, T241, E242, S244, T303, E310, T311, T312, E313, T314, Q316, R334, K335, D356, K357
Source molecule (GenBank): AFV71282.1
Assay category: BCell
Result: Positive
Quantitative measurement: 132000.0

Epitope: Epitope of Fab SNV-42 on GnH of SNV
Chemical type: Discontinuous protein residues
Discontinuous residues: S88, T241, E242, S244, T303, E310, T311, T312, E313, T314, Q316, R334, K335, D356, K357
Source molecule (GenBank): AFV71282.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.8

Epitope: Epitope of Fab SNV-42 on GnH of SNV
Chemical type: Discontinuous protein residues
Discontinuous residues: S88, T241, E242, S244, T303, E310, T311, T312, E313, T314, Q316, R334, K335, D356, K357
Source molecule (GenBank): AFV71282.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SNV-42 on GnH of SNV
Chemical type: Discontinuous protein residues
Discontinuous residues: S88, T241, E242, S244, T303, E310, T311, T312, E313, T314, Q316, R334, K335, D356, K357
Source molecule (GenBank): AFV71282.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab SNV-42 on GnH of SNV
Chemical type: Discontinuous protein residues
Discontinuous residues: S88, T241, E242, S244, T303, E310, T311, T312, E313, T314, Q316, R334, K335, D356, K357
Source molecule (GenBank): AFV71282.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0010

Epitope: Epitope of Fab SNV-42 on GnH of SNV
Chemical type: Discontinuous protein residues
Discontinuous residues: S88, T241, E242, S244, T303, E310, T311, T312, E313, T314, Q316, R334, K335, D356, K357
Source molecule (GenBank): AFV71282.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00000010
Reference: Junquan Liu; Huai-Chin Chiang; Wei Xiong; Victor Laurent; Samuel C Griffiths; Jasmin Dülfer; Hui Deng; Xiujie Sun; Y Whitney Yin; Wenliang Li; Laurent P Audoly; Zhiqiang An; Thomas Schürpf; Rong Li; Ningyan Zhang. "A highly selective humanized DDR1 mAb reverses immune exclusion by disrupting collagen fiber alignment in breast cancer." Journal for immunotherapy of cancer (2023).

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive
Quantitative measurement: 29.1

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.15

Epitope: Epitope of PRTH-101 Fab on DDR1 DS-like domain
Chemical type: Discontinuous protein residues
Discontinuous residues: G199, Q200, T201, Y203, V220, G221, G222, L223, H261, S262, F263, S264, W356
Source molecule (GenBank): Q08345.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.39
Reference: Yijian Li; Jingyu Qi; Yang Liu; Yuyu Zheng; Haibin Zhu; Yupeng Zang; Xiangyu Guan; Sichong Xie; Hongyan Zhao; Yunyun Fu; Haitao Xiang; Weicong Zhang; Huanyi Chen; Huan Liu; Yuntong Zhao; Yu Feng; Fanyu Bu; Yanling Liang; Yang Li; Qumiao Xu; Ying He; Li Sun; Longqi Liu; Ying Gu; Xun Xu; Yong Hou; Xuan Dong; Ya Liu. "High-Throughput Screening of Functional Neo-Antigens and Their Specific T-Cell Receptors via the Jurkat Reporter System Combined with Droplet Microfluidics." Analytical chemistry (2023).

Epitope: NY-ESO-1
Chemical type: Peptide from protein
Sequence: SLLMWITQC
Position: 157-165
Source molecule (GenBank): CAA05908.1
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: MART-1
Chemical type: Peptide from protein
Sequence: EAAGIGILTV
Position: 26-35
Source molecule (GenBank): U06654
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: MART-1
Chemical type: Peptide from protein
Sequence: EAAGIGILTV
Position: 26-35
Source molecule (GenBank): U06654
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Caitlin E Egan; Dessislava Stefanova; Adnan Ahmed; Vijay J Raja; Jessica W Thiesmeyer; Kevin J Chen; Jacques A Greenberg; Taotao Zhang; Bing He; Brendan M Finnerty; Rasa Zarnegar; Moonsoo M Jin; Theresa Scognamiglio; Noah Dephoure; Thomas Fahey; Irene M Min. "CSPG4 Is a Potential Therapeutic Target in Anaplastic Thyroid Cancer." Thyroid : official journal of the American Thyroid Association (2021).

Epitope: YVSDVRVSPAAPE
Chemical type: Peptide from protein
Sequence: YVSDVRVSPAAPE
Position: 342-354
Source molecule (GenBank): P43121.2
Assay category: MhcLigandElution
Result: Positive

Epitope: YVSDVRVSPAAPERQ
Chemical type: Peptide from protein
Sequence: YVSDVRVSPAAPERQ
Position: 342-356
Source molecule (GenBank): P43121.2
Assay category: MhcLigandElution
Result: Positive

Epitope: YVSDVRVSPAAPERQEG
Chemical type: Peptide from protein
Sequence: YVSDVRVSPAAPERQEG
Position: 342-358
Source molecule (GenBank): P43121.2
Assay category: MhcLigandElution
Result: Positive

Epitope: YVSGFHPSDIEVDLLK
Chemical type: Peptide from protein
Sequence: YVSGFHPSDIEVDLLK
Position: 46-61
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive

Epitope: YVTIIDAPGHRD
Chemical type: Peptide from protein
Sequence: YVTIIDAPGHRD
Position: 86-97
Source molecule (GenBank): P68104.1
Assay category: MhcLigandElution
Result: Positive

Epitope: YVTTSTRTY
Chemical type: Peptide from protein
Sequence: YVTTSTRTY
Position: 30-38
Source molecule (GenBank): P08670.4
Assay category: MhcLigandElution
Result: Positive

Epitope: YVTTSTRTY
Chemical type: Peptide from protein
Sequence: YVTTSTRTY
Position: 30-38
Source molecule (GenBank): P08670.4
Assay category: MhcLigandElution
Result: Positive

Epitope: YVYEYPSRY
Chemical type: Peptide from protein
Sequence: YVYEYPSRY
Position: 164-172
Source molecule (GenBank): Q14511.1
Assay category: MhcLigandElution
Result: Positive

Epitope: YYTEFTPTEK
Chemical type: Peptide from protein
Sequence: YYTEFTPTEK
Position: 86-95
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive

Epitope: YYTEFTPTEKD
Chemical type: Peptide from protein
Sequence: YYTEFTPTEKD
Position: 86-96
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive

Epitope: YYTEFTPTEKDE
Chemical type: Peptide from protein
Sequence: YYTEFTPTEKDE
Position: 86-97
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive

Epitope: YYTEFTPTEKDEY
Chemical type: Peptide from protein
Sequence: YYTEFTPTEKDEY
Position: 86-98
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive
Reference: Wenlong Lu; Yilin Bai; Shuai Zhang; Xuyang Zhao; Jiaxin Jin; Xiaojing Zhu; Rui Wang; Yanan Wu; Angke Zhang; Gaiping Zhang; Guoqing Zhuang; Aijun Sun. "An Intracellular Epitope of ASFV CD2v Protein Elicits Humoral and Cellular Immune Responses." Animals : an open access journal from MDPI (2023).

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: 264-EPSPREP-270
Chemical type: Peptide from protein
Sequence: EPSPREP
Position: 264-270
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive

Epitope: 264-EPSPRE-269
Chemical type: Peptide from protein
Sequence: EPSPRE
Position: 264-269
Source molecule (GenBank): QBH90546.1
Assay category: BCell
Result: Positive
Host: F 4 weeks
Reference: Caroline C Traut; Joyce L Jones; Renata A Sanders; Laura R Clark; Matthew M Hamill; Georgia Stavrakis; Joel Sop; Tyler P Beckey; Sara C Keller; Elizabeth A Gilliams; Willa V Cochran; Oliver Laeyendecker; Yukari C Manabe; Heba H Mostafa; David L Thomas; Bhakti Hansoti; Kelly A Gebo; Joel N Blankson. "Orthopoxvirus-Specific T-Cell Responses in Convalescent Mpox Patients." The Journal of infectious diseases (2024).

Epitope: VACV 18-26
Chemical type: Peptide from protein
Sequence: ILDDNLYKV
Position: 18-26
Source molecule (GenBank): AAR17925.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VACV 18-26
Chemical type: Peptide from protein
Sequence: ILDDNLYKV
Position: 18-26
Source molecule (GenBank): AAR17925.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV B14R
Chemical type: Peptide from protein
Sequence: HVDGKILFV
Position: 327-335
Source molecule (GenBank): AAA48346.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV D3R
Chemical type: Peptide from protein
Sequence: FLVIAINAM
Position: 342-350
Source molecule (GenBank): AAR17969.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV A36R
Chemical type: Peptide from protein
Sequence: MILVPLITV
Position: 1-9
Source molecule (GenBank): P33852.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV A17L
Chemical type: Peptide from protein
Sequence: RTLLGLILFV
Position: 61-70
Source molecule (GenBank): AAQ93234.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV M1L
Chemical type: Peptide from protein
Sequence: IIIPFIAYFV
Position: 426-435
Source molecule (GenBank): P14356.2
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV F11L
Chemical type: Peptide from protein
Sequence: SLSNLDFRL
Position: 346-354
Source molecule (GenBank): P21052.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VACV VETFsm
Chemical type: Peptide from protein
Sequence: VLPFDIKKL
Position: 498-506
Source molecule (GenBank): AAT10501.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Xiaotian Zhao; Xiao Wang; Mengqi Yuan; Xin Zhang; Xiaoke Yang; Xiangyu Guan; Shuwen Li; Jifei Ma; Hua-Ji Qiu; Yongfeng Li. "Identification of two novel T cell epitopes on the E2 protein of classical swine fever virus C-strain." Veterinary microbiology (2023).

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: DATDRHSDYF
Position: 1019-1028
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Peptide 2
Chemical type: Peptide from protein
Sequence: TVENEDLFY
Position: 860-868
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Negative
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Peptide 3
Chemical type: Peptide from protein
Sequence: RMDCVTTTV
Position: 853-861
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Negative
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Peptide 4
Chemical type: Peptide from protein
Sequence: HSDYFAEFV
Position: 1024-1032
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Negative
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Peptide 5
Chemical type: Peptide from protein
Sequence: ATDRHSDY
Position: 1020-1027
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Peptide 7
Chemical type: Peptide from protein
Sequence: STEEMGDDF
Position: 779-787
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Peptide 8
Chemical type: Peptide from protein
Sequence: ATDRHSDYF
Position: 1020-1028
Source molecule (GenBank): AAV65853.1
Assay category: TCell
Result: Positive
Host:  5 weeks
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Yuqi Huo; Jie Ma; Jinjin Liu. "Identification of a GII.6 norovirus blockade antibody epitope." Virus research (2023).

Epitope: VP1 380-395
Chemical type: Peptide from protein
Sequence: ILMHSESDDFVTGQPV
Position: 380-395
Source molecule (GenBank): BAN16289.1
Assay category: BCell
Result: Positive
Reference: Yanan Sheng; Zhengjun Li; Xuan Lin; Yanyan Ma; Ying Ren; Zhiguo Su; Guanghui Ma; Songping Zhang. "The position of Spy Tag/Catcher system in hepatitis B core protein particles affects the immunogenicity and stability of the synthetic vaccine." Vaccine (2023).

Epitope: M2e peptide
Chemical type: Peptide from protein
Sequence: LLTEVETPTRSEWECRCSGSS
Position: 3-23
Source molecule (GenBank): APB91430.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Wenjie Wang; Zhenwei Bi; Yakun Liu; Xingxia Xia; Jing Qian; Yeping Tan; Yumei Zhu; Suquan Song; Liping Yan. "Development of a monoclonal antibody recognizing novel linear neutralizing epitope on H protein of canine distemper virus vaccine strains (America-1 genotype)." International journal of biological macromolecules (2023).

Epitope: 238DIEREFDT245
Chemical type: Peptide from protein
Sequence: DIEREFDT
Position: 238-245
Source molecule (GenBank): ACZ56433.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: 238DIEREFDT245
Chemical type: Peptide from protein
Sequence: DIEREFDT
Position: 238-245
Source molecule (GenBank): ACZ56433.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: 238DIEREFDT245
Chemical type: Peptide from protein
Sequence: DIEREFDT
Position: 238-245
Source molecule (GenBank): ACZ56433.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Anup Y Parikh; Robert Masi; Billel Gasmi; Ken-Ichi Hanada; Maria Parkhurst; Jared Gartner; Sivasish Sindiri; Todd Prickett; Paul Robbins; Nikolaos Zacharakis; Mike Beshiri; Kathleen Kelly; Steven A Rosenberg; James C Yang. "Using patient-derived tumor organoids from common epithelial cancers to analyze personalized T-cell responses to neoantigens." Cancer immunology, immunotherapy : CII (2023).

Epitope: KRAS G12D 9mer
Chemical type: Peptide, no natural source
Sequence: GADGVGKSA
Assay category: TCell
Result: Positive
Host: F 50 years
Cell type: PBMC
Tissue: blood
Culture conditions: Engineered

Epitope: KRAS G12D 10mer
Chemical type: Peptide, no natural source
Sequence: GADGVGKSAL
Assay category: TCell
Result: Positive
Host: F 50 years
Cell type: PBMC
Tissue: blood
Culture conditions: Engineered

Epitope: KRAS G12D 10mer
Chemical type: Peptide, no natural source
Sequence: GADGVGKSAL
Assay category: TCell
Result: Positive
Host: F 50 years
Cell type: PBMC
Tissue: blood
Culture conditions: Engineered

Epitope: KRAS G12V 7-16
Chemical type: Peptide, no natural source
Sequence: VVVGAVGVGK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Engineered

Epitope: KRAS G12D 7-16
Chemical type: Peptide, no natural source
Sequence: VVVGADGVGK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Engineered
Reference: Spencer E Brightman; Angelica Becker; Rukman R Thota; Martin S Naradikian; Leila Chihab; Karla Soria Zavala; Ashmitaa Logandha Ramamoorthy Premlal; Ryan Q Griswold; Joseph S Dolina; Ezra E W Cohen; Aaron M Miller; Bjoern Peters; Stephen P Schoenberger. "Neoantigen-specific stem cell memory-like CD4<sup>+</sup> T cells mediate CD8<sup>+</sup> T cell-dependent immunotherapy of MHC class II-negative solid tumors." Nature immunology (2023).

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive-Low
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: CLTC (H129>Q) 15mer
Chemical type: Peptide, no natural source
Sequence: VALVTDNAVYQWSME
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: CLTC 20mer WT
Chemical type: Peptide from protein
Sequence: SLNTVALVTDNAVYHWSMEG
Position: 115-134
Source molecule (GenBank): Q68FD5.3
Assay category: TCell
Result: Positive-Low
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered