Reference: Toshie Mashiba; Keiko Udaka; Yasuko Hirachi; Yoichi Hiasa; Tomoya Miyakawa; Yoko Satta; Tsutomu Osoda; Sayo Kataoka; Michinori Kohara; Morikazu Onji. "Identification of CTL epitopes in hepatitis C virus by a genome-wide computational scanning and a rational design of peptide vaccine." Immunogenetics (2007).

Epitope: C36shpB
Chemical type: Peptide from protein
Sequence: LLPRRGPRL
Position: 36-44
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C36shpB
Chemical type: Peptide from protein
Sequence: LLPRRGPRL
Position: 36-44
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.71

Epitope: C77shpB
Chemical type: Peptide from protein
Sequence: AQPGYPWPL
Position: 77-85
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 5.36

Epitope: C234sh
Chemical type: Peptide from protein
Sequence: NFSRCWVAL
Position: 234-242
Source molecule (GenBank): BAA14233.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 5.92

Epitope: C360shpB
Chemical type: Peptide from protein
Sequence: AYYSMVGNW
Position: 360-368
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.47

Epitope: C616shpB
Chemical type: Peptide from protein
Sequence: WHYPCTVNF
Position: 616-624
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C616shpB
Chemical type: Peptide from protein
Sequence: WHYPCTVNF
Position: 616-624
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.39

Epitope: C666shpB
Chemical type: Peptide from protein
Sequence: LLSTTEWQI
Position: 666-674
Source molecule (GenBank): BAB18806.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C666shpB
Chemical type: Peptide from protein
Sequence: LLSTTEWQI
Position: 666-674
Source molecule (GenBank): BAB18806.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 8.34

Epitope: C764pB
Chemical type: Peptide from protein
Sequence: GILPFFMFF
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.7

Epitope: C789sh
Chemical type: Peptide from protein
Sequence: ALYGVWPLL
Position: 789-797
Source molecule (GenBank): CAB53095.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C789sh
Chemical type: Peptide from protein
Sequence: ALYGVWPLL
Position: 789-797
Source molecule (GenBank): CAB53095.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.98

Epitope: C789pB
Chemical type: Peptide from protein
Sequence: AFYGVWPLL
Position: 789-797
Source molecule (GenBank): BAD73991.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.69

Epitope: C834sh
Chemical type: Peptide from protein
Sequence: YYKVFLARL
Position: 834-842
Source molecule (GenBank): BAB18806.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C834sh
Chemical type: Peptide from protein
Sequence: YYKVFLARL
Position: 834-842
Source molecule (GenBank): BAB18806.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.12

Epitope: C838shpB
Chemical type: Peptide from protein
Sequence: FLARLIWWL
Position: 838-846
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.18

Epitope: C876pB
Chemical type: Peptide from protein
Sequence: LMCAVHPEL
Position: 876-884
Source molecule (GenBank): BAB18806.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.59

Epitope: C975sh
Chemical type: Peptide from protein
Sequence: VFSDMETKL
Position: 975-983
Source molecule (GenBank): BAA14233.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C975sh
Chemical type: Peptide from protein
Sequence: VFSDMETKL
Position: 975-983
Source molecule (GenBank): BAA14233.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.31

Epitope: C992shpB
Chemical type: Peptide from protein
Sequence: ACGDIISGL
Position: 992-1000
Source molecule (GenBank): BAA25076.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 3.91

Epitope: C1010shpB
Chemical type: Peptide from protein
Sequence: ILLGPADSF
Position: 1010-1018
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 5.5

Epitope: C1031shpB
Chemical type: Peptide from protein
Sequence: AYSQQTRGL
Position: 1031-1039
Source molecule (GenBank): CAB53095.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C1031shpB
Chemical type: Peptide from protein
Sequence: AYSQQTRGL
Position: 1031-1039
Source molecule (GenBank): CAB53095.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.54

Epitope: C1291sh
Chemical type: Peptide from protein
Sequence: ITYSTYCKF
Position: 1291-1299
Source molecule (GenBank): BAA14233.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C1291sh
Chemical type: Peptide from protein
Sequence: ITYSTYCKF
Position: 1291-1299
Source molecule (GenBank): BAA14233.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.98

Epitope: C1291pB
Chemical type: Peptide from protein
Sequence: ITYSTYGKF
Position: 1291-1299
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.37

Epitope: C1349pB
Chemical type: Peptide from protein
Sequence: ATPPGSVTF
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.51

Epitope: C1760shpB
Chemical type: Peptide from protein
Sequence: FWAKHMWNF
Position: 1760-1768
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C1760shpB
Chemical type: Peptide from protein
Sequence: FWAKHMWNF
Position: 1760-1768
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 8.1

Epitope: C1956shpB
Chemical type: Peptide from protein
Sequence: LLKRLHQWI
Position: 1956-1964
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C1956shpB
Chemical type: Peptide from protein
Sequence: LLKRLHQWI
Position: 1956-1964
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.86

Epitope: C1976pB
Chemical type: Peptide from protein
Sequence: WLRDVWDWI
Position: 1976-1984
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.34

Epitope: C1986pB
Chemical type: Peptide from protein
Sequence: TVLADFKTW
Position: 1986-1994
Source molecule (GenBank): BAA25076.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.52

Epitope: C1987pB
Chemical type: Peptide from protein
Sequence: VLADFKTWL
Position: 1987-1995
Source molecule (GenBank): BAA25076.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.63

Epitope: C2132sh
Chemical type: Peptide from protein
Sequence: RYAPVCKPL
Position: 2132-2140
Source molecule (GenBank): AAD56189.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.15

Epitope: C2132pB
Chemical type: Peptide from protein
Sequence: RYAPACKPL
Position: 2132-2140
Source molecule (GenBank): BAD73994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2132pB
Chemical type: Peptide from protein
Sequence: RYAPACKPL
Position: 2132-2140
Source molecule (GenBank): BAD73994.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.76

Epitope: C2139pB
Chemical type: Peptide from protein
Sequence: PLLRDEVTF
Position: 2139-2147
Source molecule (GenBank): BAD73998.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 5.09

Epitope: C2173shpB
Chemical type: Peptide from protein
Sequence: SMLTDPSHI
Position: 2173-2181
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2173shpB
Chemical type: Peptide from protein
Sequence: SMLTDPSHI
Position: 2173-2181
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 6.94

Epitope: C2251pB
Chemical type: Peptide from protein
Sequence: VILDSFEPL
Position: 2251-2259
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 5.0

Epitope: C2289shpB
Chemical type: Peptide from protein
Sequence: ARPDYNPPL
Position: 2289-2297
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 3.93

Epitope: C2422shpB
Chemical type: Peptide from protein
Sequence: SYTWTGALI
Position: 2422-2430
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2422shpB
Chemical type: Peptide from protein
Sequence: SYTWTGALI
Position: 2422-2430
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2422shpB
Chemical type: Peptide from protein
Sequence: SYTWTGALI
Position: 2422-2430
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2422shpB
Chemical type: Peptide from protein
Sequence: SYTWTGALI
Position: 2422-2430
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.13

Epitope: C2841shpB
Chemical type: Peptide from protein
Sequence: RMILMTHFF
Position: 2841-2849
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.42

Epitope: C2843shpB
Chemical type: Peptide from protein
Sequence: ILMTHFFSI
Position: 2843-2851
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2843shpB
Chemical type: Peptide from protein
Sequence: ILMTHFFSI
Position: 2843-2851
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2843shpB
Chemical type: Peptide from protein
Sequence: ILMTHFFSI
Position: 2843-2851
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 7.9

Epitope: C2844shpB
Chemical type: Peptide from protein
Sequence: LMTHFFSIL
Position: 2844-2852
Source molecule (GenBank): BAD73987.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 5.92

Epitope: C2962shpB
Chemical type: Peptide from protein
Sequence: SQLDLSGWF
Position: 2962-2970
Source molecule (GenBank): BAB18806.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 3.0

Epitope: C616shpB RzM6
Chemical type: Peptide from protein
Sequence: WHYPCTANF
Position: 616-624
Source molecule (GenBank): CAA43789.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C674sh RzM6
Chemical type: Peptide from protein
Sequence: VLPCSFTTL
Position: 674-682
Source molecule (GenBank): BAD73987.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C789sh RzM6
Chemical type: Peptide from protein
Sequence: AFYGVWPLL
Position: 789-797
Source molecule (GenBank): BAD73991.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C975sh RzM6
Chemical type: Peptide from protein
Sequence: VFSDMETKV
Position: 975-983
Source molecule (GenBank): CAB53095.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C1291sh RzM6
Chemical type: Peptide from protein
Sequence: ITYSTYGKF
Position: 1291-1299
Source molecule (GenBank): BAD73991.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: C2132pB RzM6
Chemical type: Peptide from protein
Sequence: RYAPACKPL
Position: 2132-2140
Source molecule (GenBank): BAD73994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone