Reference: Ulrike Jüse; Yvonne van de Wal; Frits Koning; Ludvig M Sollid; Burkhard Fleckenstein. "Design of new high-affinity peptide ligands for human leukocyte antigen-DQ2 using a positional scanning peptide library." Human immunology (2010).

Epitope: P419
Chemical type: Peptide from protein
Sequence: EPRAPWIEQEGPEYW
Position: 45-59
Source molecule (GenBank): ABO14986.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 18500.0

Epitope: P198
Chemical type: Peptide from protein
Sequence: KPLLIIAEDVEGE
Position: 201-213
Source molecule (GenBank): 1SJP_A
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 21300.0

Epitope: DQ2-alpha-I-gliadin
Chemical type: Peptide from protein
Sequence: QLQPFPQPQLPY
Position: 77-88
Source molecule (GenBank): A0A0K2QJB4.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 55200.0

Epitope: DQ2 10-mer 1
Chemical type: Peptide, no natural source
Sequence: FWADYEEEWR
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 1100.0

Epitope: DQ2 10-mer 2
Chemical type: Peptide, no natural source
Sequence: FWADYEEEFR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 2800.0

Epitope: DQ2 10-mer 3
Chemical type: Peptide, no natural source
Sequence: WWADYEEEWR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 4600.0

Epitope: DQ2 10-mer 4
Chemical type: Peptide, no natural source
Sequence: FWADYPEEWR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3300.0

Epitope: DQ2 10-mer 5
Chemical type: Peptide, no natural source
Sequence: FWADYDEEWR
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 2300.0

Epitope: DQ2 eluted 9-mer 1
Chemical type: Peptide from protein
Sequence: LAPGDQTST
Position: 2286-2294
Source molecule (GenBank): Q59FH1.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 167000.0

Epitope: DQ2 eluted 9-mer 2
Chemical type: Peptide from protein
Sequence: EIDIELAPG
Position: 2281-2289
Source molecule (GenBank): Q59FH1.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 2100.0

Epitope: DQ2 eluted 9-mer 3
Chemical type: Peptide from protein
Sequence: FEEAEQVRE
Position: 563-571
Source molecule (GenBank): EAW78564.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 8700.0

Epitope: DQ2 eluted 9-mer 4
Chemical type: Peptide from protein
Sequence: EEAEQVREE
Position: 564-572
Source molecule (GenBank): EAW78564.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 6600.0

Epitope: DQ2 eluted 9-mer 5
Chemical type: Peptide from protein
Sequence: NALSGDVWD
Position: 791-799
Source molecule (GenBank): EAW53671.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 600.0

Epitope: DQ2 eluted 9-mer 7
Chemical type: Peptide from protein
Sequence: EDEVGQEDE
Position: 190-198
Source molecule (GenBank): Q07021.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 32100.0

Epitope: DQ2 eluted 9-mer 8
Chemical type: Peptide from protein
Sequence: GQEDEAESD
Position: 194-202
Source molecule (GenBank): Q07021.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 26300.0

Epitope: DQ2 eluted 9-mer 9
Chemical type: Peptide from protein
Sequence: PTSFGYDKP
Position: 452-460
Source molecule (GenBank): P15260.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 2000.0

Epitope: DQ2 eluted 9-mer 10
Chemical type: Peptide from protein
Sequence: FGYDKPHVL
Position: 455-463
Source molecule (GenBank): P15260.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 1900.0

Epitope: DQ2 peptide ligand 1
Chemical type: Peptide from protein
Sequence: EIDIELAPGDQTSTP
Position: 2281-2295
Source molecule (GenBank): Q59FH1.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 2
Chemical type: Peptide from protein
Sequence: EFEEAEQVREENLPDE
Position: 562-577
Source molecule (GenBank): EAW78564.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 3
Chemical type: Peptide from protein
Sequence: IQGAANALSGDVWDIDN
Position: 786-802
Source molecule (GenBank): EAW53671.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 4
Chemical type: Peptide from protein
Sequence: YPEDEVGQEDEAESD
Position: 188-202
Source molecule (GenBank): Q07021.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 5
Chemical type: Peptide from protein
Sequence: APTSFGYDKPHVLVDL
Position: 451-466
Source molecule (GenBank): P15260.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 6
Chemical type: Peptide from protein
Sequence: AAAEVAGQFVIKLTHD
Position: 633-648
Source molecule (GenBank): EAW53671.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 7
Chemical type: Peptide from protein
Sequence: GPRQDATLDEEEDM
Position: 35-48
Source molecule (GenBank): CAI19004.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 8
Chemical type: Peptide from protein
Sequence: IEAVQSETVEPPPP
Position: 54-67
Source molecule (GenBank): 3I08_B
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 9
Chemical type: Peptide from protein
Sequence: DATAEEEEDFGEEAEEE
Position: 427-443
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 10
Chemical type: Peptide from protein
Sequence: DPTADDTSAAVTEEMPP
Position: 702-718
Source molecule (GenBank): P07900.5
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 11
Chemical type: Peptide from protein
Sequence: ISQELEELRAEQQR
Position: 88-101
Source molecule (GenBank): P06734.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 12
Chemical type: Peptide from protein
Sequence: IDEDEVAAEEPN
Position: 598-609
Source molecule (GenBank): AAF82792.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 14
Chemical type: Peptide from protein
Sequence: SDTEVYGEFYPVPPP
Position: 162-176
Source molecule (GenBank): NP_001154879.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 15
Chemical type: Peptide from protein
Sequence: SSILSILLEEVSPE
Position: 366-379
Source molecule (GenBank): CAI40836.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 16
Chemical type: Peptide from protein
Sequence: IEIIPIQEEEEE
Position: 262-273
Source molecule (GenBank): P11836.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DQ2 peptide ligand 17
Chemical type: Peptide from protein
Sequence: GKVDIVAINDPFID
Position: 26-39
Source molecule (GenBank): P04406.3
Assay category: MhcLigandElution
Result: Positive