Reference: Abraham Sachs; Eugene Moore; Zeynep Kosaloglu-Yalcin; Bjoern Peters; John Sidney; Steven A Rosenberg; Paul F Robbins; Alessandro Sette. "Impact of Cysteine Residues on MHC Binding Predictions and Recognition by Tumor-Reactive T Cells." Journal of immunology (Baltimore, Md. : 1950) (2020).

Epitope: CTAG2(157-165)
Chemical type: Peptide from protein
Sequence: SLLMWITQC
Position: 99-107
Source molecule (GenBank): 133777817
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: CTAG2(157-165)
Chemical type: Peptide from protein
Sequence: SLLMWITQC
Position: 99-107
Source molecule (GenBank): 133777817
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 13487.0

Epitope: CTAG2(157-165)
Chemical type: Peptide from protein
Sequence: SLLMWITQC
Position: 99-107
Source molecule (GenBank): 133777817
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: CTAG2(157-165)
Chemical type: Peptide from protein
Sequence: SLLMWITQC
Position: 99-107
Source molecule (GenBank): 133777817
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 64.0

Epitope: HIVEP2(1674-1682)P1682L
Chemical type: Peptide, no natural source
Sequence: CISSCNPNL
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: HIVEP2(1674-1682)P1682L
Chemical type: Peptide, no natural source
Sequence: CISSCNPNL
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 20000.0

Epitope: HIVEP2(1674-1682)P1682L
Chemical type: Peptide, no natural source
Sequence: CISSCNPNL
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: HIVEP2(1674-1682)P1682L
Chemical type: Peptide, no natural source
Sequence: CISSCNPNL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 575.0

Epitope: HIVEP2(1674-1682)WT
Chemical type: Peptide from protein
Sequence: CISSCNPNP
Position: 1674-1682
Source molecule (GenBank): 110347463
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 20000.0

Epitope: HIVEP2(1674-1682)WT
Chemical type: Peptide from protein
Sequence: CISSCNPNP
Position: 1674-1682
Source molecule (GenBank): 110347463
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 20000.0

Epitope: HIVEP2(1674-1682)WT
Chemical type: Peptide from protein
Sequence: CISSCNPNP
Position: 1674-1682
Source molecule (GenBank): 110347463
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 20000.0

Epitope: HIVEP2(1674-1682)WT
Chemical type: Peptide from protein
Sequence: CISSCNPNP
Position: 1674-1682
Source molecule (GenBank): 110347463
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 13800.0

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 461.0

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 63.0

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 162.0

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: PHLPP1(563-571)G556E
Chemical type: Peptide, no natural source
Sequence: ILCETCLIV
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 18.0

Epitope: PHLPP1(563-571)WT
Chemical type: Peptide from protein
Sequence: ILCGTCLIV
Position: 563-571
Source molecule (GenBank): O60346.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 192.0

Epitope: PHLPP1(563-571)WT
Chemical type: Peptide from protein
Sequence: ILCGTCLIV
Position: 563-571
Source molecule (GenBank): O60346.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 419.0

Epitope: PHLPP1(563-571)WT
Chemical type: Peptide from protein
Sequence: ILCGTCLIV
Position: 563-571
Source molecule (GenBank): O60346.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1395.0

Epitope: PHLPP1(563-571)WT
Chemical type: Peptide from protein
Sequence: ILCGTCLIV
Position: 563-571
Source molecule (GenBank): O60346.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1103.0

Epitope: CYFIP1(116-124)I121V
Chemical type: Peptide, no natural source
Sequence: SCSRAVPQV
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: CYFIP1(116-124)I121V
Chemical type: Peptide, no natural source
Sequence: SCSRAVPQV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 11649.0

Epitope: CYFIP1(116-124)I121V
Chemical type: Peptide, no natural source
Sequence: SCSRAVPQV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: CYFIP1(116-124)I121V
Chemical type: Peptide, no natural source
Sequence: SCSRAVPQV
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1251.0

Epitope: CYFIP1(116-124)WT
Chemical type: Peptide from protein
Sequence: SCSRAIPQV
Position: 122-130
Source molecule (GenBank): 1022943302
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1120.0

Epitope: CDK4(23-32)R24C
Chemical type: Peptide from protein
Sequence: ACDPHSGHFV
Position: 23-32
Source molecule (GenBank): 763124
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 2272.0

Epitope: CDK4(23-32)WT
Chemical type: Peptide from protein
Sequence: ARDPHSGHFV
Position: 23-32
Source molecule (GenBank): 119617468
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 20000.0

Epitope: TP53(168-176)R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: TCell
Result: Positive-Low
Host: F 36
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: TP53(168-176)R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 4210.0

Epitope: TP53(168-176)R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: TCell
Result: Positive
Host: F 36
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: TP53(168-176)R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 318.0

Epitope: TP53(168-176)WT
Chemical type: Peptide from protein
Sequence: HMTEVVRRC
Position: 168-176
Source molecule (GenBank): 506433
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 10186.0

Epitope: TP53(168-176)WT
Chemical type: Peptide from protein
Sequence: HMTEVVRRC
Position: 168-176
Source molecule (GenBank): 506433
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 337.0

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1975.0

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 508.0

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 11.0

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: PMEL(639-647)
Chemical type: Peptide from protein
Sequence: RLPRIFCSC
Position: 639-647
Source molecule (GenBank): 5902084
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 4.7

Epitope: GALK1(242–250)
Chemical type: Peptide, no natural source
Sequence: QCEEVARVL
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: GALK1(242–250)
Chemical type: Peptide, no natural source
Sequence: QCEEVARVL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: RSL1D1(175–183)
Chemical type: Peptide, no natural source
Sequence: KSPNPSTPC
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: RSL1D1(175–183)
Chemical type: Peptide, no natural source
Sequence: KSPNPSTPC
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: ECI2(350–358)
Chemical type: Peptide, no natural source
Sequence: CTIAVVNFL
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: ECI2(350–358)
Chemical type: Peptide, no natural source
Sequence: CTIAVVNFL
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: TP53(241–249)
Chemical type: Peptide, no natural source
Sequence: SCMGGMNWR
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: TP53(241–249)
Chemical type: Peptide, no natural source
Sequence: SCMGGMNWR
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: colon
Culture conditions: Direct Ex Vivo

Epitope: GnTV(intron)
Chemical type: Peptide from protein
Sequence: VLPDVFIRC
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 482.0

Epitope: GnTV(intron)
Chemical type: Peptide from protein
Sequence: VLPDVFIRC
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 0.6

Epitope: CDK4(23-32)R24C
Chemical type: Peptide, no natural source
Sequence: ACDPHSGHFV
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 20000.0

Epitope: BING4(altorf)
Chemical type: Peptide from protein
Sequence: CQWGRLWQL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1425.0