Reference: Nianzhi Zhang; Jianxun Qi; Sijia Feng; Feng Gao; Jun Liu; Xiaocheng Pan; Rong Chen; Qirun Li; Zhaosan Chen; Xiaoying Li; Chun Xia; George F Gao. "Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides." Journal of virology (2011).

Epitope: Ebola virus vp35 (155-163) (Ebola<sub>AY9</sub>)
Chemical type: Peptide from protein
Sequence: ATAAATEAY
Position: 154-162
Source molecule (GenBank): NP_066244.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.1

Epitope: Ebola virus vp35 (155-163) (Ebola<sub>AY9</sub>)
Chemical type: Peptide from protein
Sequence: ATAAATEAY
Position: 154-162
Source molecule (GenBank): NP_066244.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 47.5

Epitope: Influenza A virus NA (304-312)
Chemical type: Peptide from protein
Sequence: VSFNQNLEY
Position: 304-312
Source molecule (GenBank): ACR33001.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus HA (87-95)
Chemical type: Peptide from protein
Sequence: LSTASSWSY
Position: 87-95
Source molecule (GenBank): ACR32998.1
Assay category: MhcBinding
Result: Positive

Epitope: Influenza A virus HA (126-134)
Chemical type: Peptide from protein
Sequence: SSFERFEIF
Position: 126-134
Source molecule (GenBank): ACR32998.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus M1 (1-10)
Chemical type: Peptide from protein
Sequence: MSLLTEVETY
Position: 1-10
Source molecule (GenBank): ACR32999.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus NS1 (82-89)
Chemical type: Peptide from protein
Sequence: ASVPTSRY
Position: 82-89
Source molecule (GenBank): AEK85784.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus PA (557-565)
Chemical type: Peptide from protein
Sequence: QVSRPMFLY
Position: 556-564
Source molecule (GenBank): ACR33005.1
Assay category: MhcBinding
Result: Positive

Epitope: Influenza A virus PA (679-687)
Chemical type: Peptide from protein
Sequence: GTFDLGGLY
Position: 679-687
Source molecule (GenBank): ACR33005.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus PB1 (488-497)
Chemical type: Peptide from protein
Sequence: GTFEFTSFFY
Position: 488-497
Source molecule (GenBank): ACR33006.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus NP (145-153)
Chemical type: Peptide from protein
Sequence: ATYQRTRAL
Position: 146-154
Source molecule (GenBank): ACR33002.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus NP (480-488)
Chemical type: Peptide from protein
Sequence: MSNEGSYFF
Position: 481-489
Source molecule (GenBank): ACR33002.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus NA (25-33)
Chemical type: Peptide from protein
Sequence: QIGNIISIW
Position: 25-33
Source molecule (GenBank): ACR33001.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus NA (414-423)
Chemical type: Peptide from protein
Sequence: GLDCIRPCFW
Position: 414-423
Source molecule (GenBank): ACR33001.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus HA (16-24)
Chemical type: Peptide from protein
Sequence: NADTLCIGY
Position: 16-24
Source molecule (GenBank): ACR32998.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus HA (343-351)
Chemical type: Peptide from protein
Sequence: IAGFIEGGW
Position: 350-358
Source molecule (GenBank): ACR32998.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus HA (358-366)
Chemical type: Peptide from protein
Sequence: WTGMVDGWY
Position: 358-366
Source molecule (GenBank): ACR32998.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus HA (445-454)
Chemical type: Peptide from protein
Sequence: LLENERTLDY
Position: 445-454
Source molecule (GenBank): ACR32998.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus M1 (36-45)
Chemical type: Peptide from protein
Sequence: NTDLEALMEW
Position: 36-45
Source molecule (GenBank): ACR32999.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus M2 (83-91)
Chemical type: Peptide from protein
Sequence: AVDVDDGHF
Position: 83-91
Source molecule (GenBank): ACR33000.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus NP (44-52) (S-OIV<sub>CY9</sub>)
Chemical type: Peptide from protein
Sequence: CTELKLSDY
Position: 44-52
Source molecule (GenBank): ACR33002.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 43.3

Epitope: Influenza A virus NP (378-386)
Chemical type: Peptide from protein
Sequence: TLELRSRYW
Position: 378-386
Source molecule (GenBank): ACR33002.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus NS1 (194-202)
Chemical type: Peptide from protein
Sequence: VSENIQRFAW
Position: 194-203
Source molecule (GenBank): AEK85784.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus PA (437-445)
Chemical type: Peptide from protein
Sequence: HIASMRRNY
Position: 437-445
Source molecule (GenBank): ACR33005.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus PA (531-539)
Chemical type: Peptide from protein
Sequence: RLEPHKWEKY
Position: 531-540
Source molecule (GenBank): ACR33005.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus PB1 (347-355) (S-OIV<sub>KY9</sub>)
Chemical type: Peptide from protein
Sequence: KMARLGKGY
Position: 347-355
Source molecule (GenBank): P03431.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 37.3

Epitope: Influenza A virus PB1 (372-380)
Chemical type: Peptide from protein
Sequence: MLASIDLKY
Position: 372-380
Source molecule (GenBank): ACR33006.1
Assay category: MhcBinding
Result: Negative

Epitope: Influenza A virus PB1 (591-599) (S-OIV<sub>VY9</sub>)
Chemical type: Peptide from protein
Sequence: VSDGGPNLY
Position: 591-599
Source molecule (GenBank): ACR33006.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 43.1

Epitope: Influenza A virus PB2 (197-205)
Chemical type: Peptide from protein
Sequence: KIAPLMVAY
Position: 197-205
Source molecule (GenBank): ACR33007.1
Assay category: MhcBinding
Result: Positive-High

Epitope: Influenza A virus PB2 (213-222)
Chemical type: Peptide from protein
Sequence: VAGGTGSVY
Position: 220-228
Source molecule (GenBank): ACR33007.1
Assay category: MhcBinding
Result: Positive