LiteFold/IEDB huggingface dataset:
Reference: Savita Budania; Abhishek Dubey; Ajit Singh. "Trypanosoma evansi RoTat 1.2 variant surface antigen mimotopes selected by panning of the random peptide phage-display library against monoclonal antibodies." Journal of molecular recognition : JMR (2022).

Epitope: 2E11 mimotope 1
Chemical type: Peptide, no natural source
Sequence: HWKAVNWLKPWT
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 1
Chemical type: Peptide, no natural source
Sequence: HWKAVNWLKPWT
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 1
Chemical type: Peptide, no natural source
Sequence: HWKAVNWLKPWT
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 1
Chemical type: Peptide, no natural source
Sequence: HWKAVNWLKPWT
Assay category: BCell
Result: Positive
Quantitative measurement: 35000.0

Epitope: 2E11 mimotope 3
Chemical type: Peptide, no natural source
Sequence: NSLWMVQSHMRA
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 3
Chemical type: Peptide, no natural source
Sequence: NSLWMVQSHMRA
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 3
Chemical type: Peptide, no natural source
Sequence: NSLWMVQSHMRA
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 4
Chemical type: Peptide, no natural source
Sequence: WTPGQWQWIIDN
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 4
Chemical type: Peptide, no natural source
Sequence: WTPGQWQWIIDN
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 4
Chemical type: Peptide, no natural source
Sequence: WTPGQWQWIIDN
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 1
Chemical type: Peptide, no natural source
Sequence: WTPGQWQWIIDN
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 1
Chemical type: Peptide, no natural source
Sequence: WTPGQWQWIIDN
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 1
Chemical type: Peptide, no natural source
Sequence: WTPGQWQWIIDN
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 690000.0

Epitope: 1C2 mimotope 2
Chemical type: Peptide, no natural source
Sequence: GSHLGHWWHFSP
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 2
Chemical type: Peptide, no natural source
Sequence: GSHLGHWWHFSP
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 3
Chemical type: Peptide, no natural source
Sequence: VPPYHYSGPQIG
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 3
Chemical type: Peptide, no natural source
Sequence: VPPYHYSGPQIG
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 5
Chemical type: Peptide, no natural source
Sequence: NYATTWPVFHVT
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 5
Chemical type: Peptide, no natural source
Sequence: NYATTWPVFHVT
Assay category: BCell
Result: Positive
Reference: David B Langley; Peter Schofield; Damien Nevoltris; Jennifer Jackson; Katherine J L Jackson; Tim J Peters; Melanie Burk; Jacqueline M Matthews; Antony Basten; Christopher C Goodnow; Sheryl van Nunen; Joanne H Reed; Daniel Christ. "Genetic and structural basis of the human anti-α-galactosyl antibody response." Proceedings of the National Academy of Sciences of the United States of America (2022).

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 1.55

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 100000.0

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 16000.0

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 2.31
Host: F 18 years

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 2000.0

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 22000.0
Host: F 18 years

Epitope: α1-3 galactobiose
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 100000.0
Host: F 39 years
Reference: Shijiang Mi; Lihua Wang; Hongwei Li; Fei Bao; Rachel Madera; Xiju Shi; Liying Zhang; Yingying Mao; Renhe Yan; Xianzhu Xia; Wenjie Gong; Jishu Shi; Changchun Tu. "Characterization of monoclonal antibodies that specifically differentiate field isolates from vaccine strains of classical swine fever virus." Frontiers in immunology (2022).

Epitope: CSFV-Shimen-E2 213-215
Chemical type: Peptide from protein
Sequence: EPD
Position: 902-904
Source molecule (GenBank): AAV40685.2
Assay category: BCell
Result: Positive

Epitope: CSFV-Shimen-E2 213-215
Chemical type: Peptide from protein
Sequence: EPD
Position: 902-904
Source molecule (GenBank): AAV40685.2
Assay category: BCell
Result: Positive

Epitope: CSFV-Shimen-E2 271-274
Chemical type: Peptide from protein
Sequence: RLGP
Position: 960-963
Source molecule (GenBank): AAV40685.2
Assay category: BCell
Result: Positive

Epitope: CSFV-Shimen-E2 271-274
Chemical type: Peptide from protein
Sequence: RLGP
Position: 960-963
Source molecule (GenBank): AAV40685.2
Assay category: BCell
Result: Positive

Epitope: CSFV-Shimen-E2 271-274
Chemical type: Peptide from protein
Sequence: RLGP
Position: 960-963
Source molecule (GenBank): AAV40685.2
Assay category: BCell
Result: Positive

Epitope: CSFV-Shimen-E2 271-274
Chemical type: Peptide from protein
Sequence: RLGP
Position: 960-963
Source molecule (GenBank): AAV40685.2
Assay category: BCell
Result: Positive

Epitope: CSFV-E2 37-42
Chemical type: Peptide from protein
Sequence: LQLNDG
Position: 726-731
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive

Epitope: CSFV-E2 37-42
Chemical type: Peptide from protein
Sequence: LQLNDG
Position: 726-731
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive-Low

Epitope: CSFV-E2 37-42
Chemical type: Peptide from protein
Sequence: LQLNDG
Position: 726-731
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive

Epitope: CSFV-E2 37-42
Chemical type: Peptide from protein
Sequence: LQLNDG
Position: 726-731
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive-Low

Epitope: CSFV-Erns 305-309, 348
Chemical type: Discontinuous protein residues
Discontinuous residues: C305, K306, G307, V308, P309, W348
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive-Low

Epitope: CSFV-Erns 305-309, 348
Chemical type: Discontinuous protein residues
Discontinuous residues: C305, K306, G307, V308, P309, W348
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive

Epitope: CSFV-Erns 305-309, 348
Chemical type: Discontinuous protein residues
Discontinuous residues: C305, K306, G307, V308, P309, W348
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive-Low

Epitope: CSFV-Erns 305-309, 348
Chemical type: Discontinuous protein residues
Discontinuous residues: C305, K306, G307, V308, P309, W348
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive-Low
Reference: Simon Jenni; Zongli Li; Yuhuan Wang; Theresa Bessey; Eric N Salgado; Aaron G Schmidt; Harry B Greenberg; Baoming Jiang; Stephen C Harrison. "Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion." Journal of virology (2022).

Epitope: Epitope of mAb 41 on rotavirus VP5*/VP8*
Chemical type: Region on multi-chain protein
Discontinuous residues: 1: Y327, G329, G330, L332, T334, D335, F336, L388, P389, V390, G391, A392, W393, V395, L439, R440, T441, R442; U: P68, Q70, N85, N87, T88, N89, E109, H111, N135, R162, Y205, I226
Source molecule (GenBank): X4YMN0
Assay category: BCell
Result: Positive
Reference: Eero Hietanen; Lav Tripathi; Eeva-Christine Brockmann; Pirjo Merilahti; Urpo Lamminmäki; Petri Susi. "Isolation and characterization of phage display-derived scFv antibodies against human parechovirus 1 VP0 protein." Scientific reports (2022).

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive

Epitope: scFv epitope
Chemical type: Peptide from protein
Sequence: VVTYDSKL
Position: 192-199
Source molecule (GenBank): QCY50220.1
Assay category: BCell
Result: Positive
Reference: Peijie Dong; Suying Cheng; Yudie Wang; Hang Gao; Yongmin Zhang; Tao Zhu; Peng Yu; Xin Meng. "A self-adjuvanting anti-tumor nanoliposomal vaccine based on fluorine-substituted MUC1 glycopeptide." Chemical communications (Cambridge, England) (2022).

Epitope: fluorinated αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide, no natural source
Sequence: PDTRP
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks

Epitope: fluorinated αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide, no natural source
Sequence: PDTRP
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks

Epitope: fluorinated αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide, no natural source
Sequence: PDTRP
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks

Epitope: fluorinated αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide, no natural source
Sequence: PDTRP
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide from protein
Sequence: PDTRP
Position: 142-146
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: BCell
Result: Positive-Low
Host: F 6-8 weeks

Epitope: αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide from protein
Sequence: PDTRP
Position: 142-146
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide from protein
Sequence: PDTRP
Position: 142-146
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks

Epitope: αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide from protein
Sequence: PDTRP
Position: 142-146
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide from protein
Sequence: PDTRP
Position: 142-146
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: BCell
Result: Positive-Low
Host: F 6-8 weeks

Epitope: αGalNAc-O-Threonine MUC1 peptide
Chemical type: Peptide from protein
Sequence: PDTRP
Position: 142-146
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks
Reference: Zhenhui Ren; Huixia Zhang; Liu Yang; Zile Wang; Jincheng Xiong; Pimiao Zheng; Jianyi Wang; Haiyang Jiang. "Targeted preparation and recognition mechanism of broad-spectrum antibody specific to Aconitum alkaloids based on molecular modeling and its application in immunoassay." Analytica chimica acta. (2022).

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: aconitine (ACO)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Yumi Irie; Yuka Matsushima; Akiko Kita; Kunio Miki; Tatsuya Segawa; Masahiro Maeda; Ryo C Yanagita; Kazuhiro Irie. "Structural basis of the 24B3 antibody against the toxic conformer of amyloid β with a turn at positions 22 and 23." Biochemical and biophysical research communications (2022).

Epitope: E22P-Aß17-26
Chemical type: Peptide, no natural source
Sequence: KLVFFAPDVGS
Assay category: BCell
Result: Positive

Epitope: E22P-Aß17-26
Chemical type: Peptide, no natural source
Sequence: KLVFFAPDVGS
Assay category: BCell
Result: Positive

Epitope: E22P-Aß17-26
Chemical type: Peptide, no natural source
Sequence: KLVFFAPDVGS
Assay category: BCell
Result: Positive
Quantitative measurement: 2.6
Reference: Parisa Malekzadeh; Rami Yossef; Gal Cafri; Biman C Paria; Frank J Lowery; Mohammad Jafferji; Meghan L Good; Abraham Sachs; Amy R Copeland; Sanghyun P Kim; Scott Kivitz; Maria R Parkhurst; Paul F Robbins; Satyajit Ray; Liqiang Xi; Mark Raffeld; Zhiya Yu; Nicholas P Restifo; Robert P T Somerville; Steven A Rosenberg; Drew C Deniger. "Antigen Experienced T Cells from Peripheral Blood Recognize p53 Neoantigens." Clinical cancer research : an official journal of the American Association for Cancer Research (2020).

Epitope: p53 mut R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: TCell
Result: Positive
Host: M 52 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p53 mut R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: TCell
Result: Negative
Host: M 52 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p53 mut R175H
Chemical type: Peptide, no natural source
Sequence: HMTEVVRHC
Assay category: TCell
Result: Positive
Host: M 52 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p53 mut R248W
Chemical type: Peptide, no natural source
Sequence: SSCMGGMNWR
Assay category: TCell
Result: Positive
Host: F 41 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p53 mut R175H P2
Chemical type: Peptide, no natural source
Sequence: EVVRHCPHHER
Assay category: TCell
Result: Positive
Host: M 46 years
Cell type: T cell
Tissue: blood
Culture conditions: Engineered

Epitope: p53 wt-R175
Chemical type: Peptide from protein
Sequence: HMTEVVRRC
Position: 129-137
Source molecule (GenBank): A0A0U1RQC9.1
Assay category: TCell
Result: Negative
Host: M 52 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p53 wt-R248
Chemical type: Peptide from protein
Sequence: SSCMGGMNRR
Position: 201-210
Source molecule (GenBank): A0A0U1RQC9.1
Assay category: TCell
Result: Negative
Host: F 41 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Joost H van den Berg; Bianca Heemskerk; Nienke van Rooij; Raquel Gomez-Eerland; Samira Michels; Maaike van Zon; Renate de Boer; Noor A M Bakker; Annelies Jorritsma-Smit; Marit M van Buuren; Pia Kvistborg; Hergen Spits; Remko Schotte; Henk Mallo; Matthias Karger; Joris A van der Hage; Michel W J M Wouters; Loes M Pronk; Marnix H Geukes Foppen; Christian U Blank; Jos H Beijnen; Bastiaan Nuijen; Ton N Schumacher; John B A G Haanen. "Tumor infiltrating lymphocytes (TIL) therapy in metastatic melanoma: boosting of neoantigen-specific T cell reactivity and long-term follow-up." Journal for immunotherapy of cancer (2020).

Epitope: RBM12 S>L
Chemical type: Peptide, no natural source
Sequence: LPHEAGFCV
Assay category: TCell
Result: Positive
Host: M 46
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VARS T>M
Chemical type: Peptide, no natural source
Sequence: EVADEAMGAL
Assay category: TCell
Result: Positive
Host: M 46
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MYLK G>V
Chemical type: Peptide, no natural source
Sequence: EVFPEDTVTY
Assay category: TCell
Result: Positive
Host: M 46
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LRP3 T>S
Chemical type: Peptide, no natural source
Sequence: LTAARPSQSVL
Assay category: TCell
Result: Positive
Host: M 46
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: WDR1 N>K
Chemical type: Peptide, no natural source
Sequence: DSFAGKGHTK
Assay category: TCell
Result: Positive
Host: M 46
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TTC37 A>V
Chemical type: Peptide, no natural source
Sequence: YLDGKVVDY
Assay category: TCell
Result: Positive
Host: F 44
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ENTPD4 P>L
Chemical type: Peptide, no natural source
Sequence: ATDTNNLNVNY
Assay category: TCell
Result: Positive
Host: F 44
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: RAD51AP1-002 S>F
Chemical type: Peptide, no natural source
Sequence: KVKFPVEKK
Assay category: TCell
Result: Positive
Host: M 40
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Nienke van Rooij; Marit M van Buuren; Daisy Philips; Arno Velds; Mireille Toebes; Bianca Heemskerk; Laura J A van Dijk; Sam Behjati; Henk Hilkmann; Dris El Atmioui; Marja Nieuwland; Michael R Stratton; Ron M Kerkhoven; Can Kesmir; John B Haanen; Pia Kvistborg; Ton N Schumacher. "Tumor exome analysis reveals neoantigen-specific T-cell reactivity in an ipilimumab-responsive melanoma." Journal of clinical oncology : official journal of the American Society of Clinical Oncology (2013).

Epitope: ATR (S>L) peptide
Chemical type: Peptide, no natural source
Sequence: KLYEEPLLK
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ATR (S>L) peptide
Chemical type: Peptide, no natural source
Sequence: KLYEEPLLK
Assay category: TCell
Result: Positive
Host: M 56 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ATR (S>L) peptide
Chemical type: Peptide, no natural source
Sequence: KLYEEPLLK
Assay category: TCell
Result: Negative
Host: M 56 years
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ATR wild-type peptide
Chemical type: Peptide from protein
Sequence: KLYEEPLSK
Position: 289-297
Source molecule (GenBank): Q13535.3
Assay category: TCell
Result: Negative
Host: M 56 years
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Sophie Sneddon; Craig M Rive; Shaokang Ma; Ian M Dick; Richard J N Allcock; Scott D Brown; Robert A Holt; Mark Watson; Shay Leary; Y C Gary Lee; Bruce W S Robinson; Jenette Creaney. "Identification of a CD8+ T-cell response to a predicted neoantigen in malignant mesothelioma." Oncoimmunology (2020).

Epitope: ROBO3
Chemical type: Peptide, no natural source
Sequence: SEHSPVSEPV
Assay category: TCell
Result: Positive
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: ROBO3
Chemical type: Peptide, no natural source
Sequence: SEHSPVSEPV
Assay category: TCell
Result: Negative
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ROBO3
Chemical type: Peptide, no natural source
Sequence: SEHSPVSEPV
Assay category: TCell
Result: Positive
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PML
Chemical type: Peptide, no natural source
Sequence: KELADFWCF
Assay category: TCell
Result: Negative
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: IRF2BP1
Chemical type: Peptide, no natural source
Sequence: LVGSSVPWAFR
Assay category: TCell
Result: Negative
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: RALGAPA1
Chemical type: Peptide, no natural source
Sequence: SQAFLQFQR
Assay category: TCell
Result: Negative
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ARHGAP33
Chemical type: Peptide, no natural source
Sequence: LSNSGKDVPK
Assay category: TCell
Result: Negative
Host: M 70
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Frank J Lowery; Sri Krishna; Rami Yossef; Neilesh B Parikh; Praveen D Chatani; Nikolaos Zacharakis; Maria R Parkhurst; Noam Levin; Sivasish Sindiri; Abraham Sachs; Kyle J Hitscherich; Zhiya Yu; Nolan R Vale; Yong-Chen Lu; Zhili Zheng; Li Jia; Jared J Gartner; Victoria K Hill; Amy R Copeland; Shirley K Nah; Robert V Masi; Billel Gasmi; Scott Kivitz; Biman C Paria; Maria Florentin; Sanghyun P Kim; Ken-Ichi Hanada; Yong F Li; Lien T Ngo; Satyajit Ray; Mackenzie L Shindorf; Shoshana T Levi; Ryan Shepherd; Chris Toy; Anup Y Parikh; Todd D Prickett; Michael C Kelly; Rachel Beyer; Stephanie L Goff; James C Yang; Paul F Robbins; Steven A Rosenberg. "Molecular signatures of antitumor neoantigen-reactive T cells from metastatic human cancers." Science (New York, N.Y.) (2022).

Epitope: HPV16 E4 73-81
Chemical type: Peptide from protein
Sequence: LQSSLHLTA
Position: 73-81
Source molecule (GenBank): P06922.1
Assay category: TCell
Result: Positive
Host: F 54 years
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Cell Line / Clone

Epitope: HPV16 E4 73-81
Chemical type: Peptide from protein
Sequence: LQSSLHLTA
Position: 73-81
Source molecule (GenBank): P06922.1
Assay category: TCell
Result: Positive
Host: F 54 years
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Cell Line / Clone
Reference: Leon T van den Broeke; C David Pendleton; Crystal Mackall; Lee J Helman; Jay A Berzofsky. "Identification and epitope enhancement of a PAX-FKHR fusion protein breakpoint epitope in alveolar rhabdomyosarcoma cells created by a tumorigenic chromosomal translocation inducing CTL capable of lysing human tumors." Cancer research (2006).

Epitope: RS10
Chemical type: Peptide, no natural source
Sequence: SPQNSIRHNL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: RS10
Chemical type: Peptide, no natural source
Sequence: SPQNSIRHNL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: RS10
Chemical type: Peptide, no natural source
Sequence: SPQNSIRHNL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: RS10
Chemical type: Peptide, no natural source
Sequence: SPQNSIRHNL
Assay category: MhcBinding
Result: Positive

Epitope: RS10-3A
Chemical type: Peptide, no natural source
Sequence: SPANSIRHNL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: RS10-3A
Chemical type: Peptide, no natural source
Sequence: SPANSIRHNL
Assay category: MhcBinding
Result: Positive-High

Epitope: RS10-5A
Chemical type: Peptide, no natural source
Sequence: SPQNAIRHNL
Assay category: MhcBinding
Result: Positive

Epitope: RS10-6A
Chemical type: Peptide, no natural source
Sequence: SPQNSARHNL
Assay category: MhcBinding
Result: Positive