Reference: A L Erickson; Y Kimura; S Igarashi; J Eichelberger; M Houghton; J Sidney; D McKinney; A Sette; A L Hughes; C M Walker. "The outcome of hepatitis C virus infection is predicted by escape mutations in epitopes targeted by cytotoxic T lymphocytes." Immunity (2001).

Epitope: NS4 1629-1637
Chemical type: Peptide from protein
Sequence: GAVQNEITL
Position: 1629-1637
Source molecule (GenBank): BAA01943.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637
Chemical type: Peptide from protein
Sequence: GAVQNEITL
Position: 1629-1637
Source molecule (GenBank): BAA01943.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637
Chemical type: Peptide from protein
Sequence: GAVQNEITL
Position: 1629-1637
Source molecule (GenBank): BAA01943.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 39.0

Epitope: E2 588-596
Chemical type: Peptide from protein
Sequence: KHPDATYSR
Position: 588-596
Source molecule (GenBank): AAA45676.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: E2 588-596 variant
Chemical type: Peptide from protein
Sequence: KHPDATYTR
Position: 589-597
Source molecule (GenBank): O39928.3
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: E2 588-596 variant
Chemical type: Peptide from protein
Sequence: KHPSASYAR
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS2 1011-1021 variant
Chemical type: Peptide from protein
Sequence: LLGPADKMVSK
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNEITT
Position: 1631-1639
Source molecule (GenBank): BAA32666.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNEITT
Position: 1631-1639
Source molecule (GenBank): BAA32666.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 18000.0

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNEITS
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNEITS
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 18000.0

Epitope: NS3 1446-1454 variant
Chemical type: Peptide from protein
Sequence: GDFESVIDC
Position: 585-593
Source molecule (GenBank): ADC54470.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS3 1444-1452
Chemical type: Peptide from protein
Sequence: YTGDFDSVI
Position: 1444-1452
Source molecule (GenBank): P26663.3
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1444-1452
Chemical type: Peptide from protein
Sequence: YTGDFDSVI
Position: 1444-1452
Source molecule (GenBank): P26663.3
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1444-1452
Chemical type: Peptide from protein
Sequence: YTGDFDSVI
Position: 1444-1452
Source molecule (GenBank): P26663.3
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 3.7

Epitope: NS3 1444-1452 variant
Chemical type: Peptide from protein
Sequence: YTGDFESVI
Position: 583-591
Source molecule (GenBank): ADC54470.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1444-1452 variant
Chemical type: Peptide from protein
Sequence: YTGDFESVI
Position: 583-591
Source molecule (GenBank): ADC54470.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 22.0

Epitope: NS3 1444-1452 variant
Chemical type: Peptide from protein
Sequence: YTGDFDSVV
Position: 1448-1456
Source molecule (GenBank): CBJ52795.2
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1444-1452 variant
Chemical type: Peptide from protein
Sequence: YTGDFDSVV
Position: 1448-1456
Source molecule (GenBank): CBJ52795.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 532.0

Epitope: NS3 1639-1648
Chemical type: Peptide from protein
Sequence: DAAARVTAIL
Position: 1939-1948
Source molecule (GenBank): AAA45534.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1639-1648
Chemical type: Peptide from protein
Sequence: DAAARVTAIL
Position: 1939-1948
Source molecule (GenBank): AAA45534.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 236.0

Epitope: NS3 1639-1648 variant
Chemical type: Peptide from protein
Sequence: DASARVTAIL
Position: 1939-1948
Source molecule (GenBank): ABY67644.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1639-1648 variant
Chemical type: Peptide from protein
Sequence: DASARVTAIL
Position: 1939-1948
Source molecule (GenBank): ABY67644.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 3248.0

Epitope: NS5 1989-1997
Chemical type: Peptide from protein
Sequence: SDFKTWLKA
Position: 1989-1997
Source molecule (GenBank): AAB67037.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS5 1989-1997
Chemical type: Peptide from protein
Sequence: SDFKTWLKA
Position: 1989-1997
Source molecule (GenBank): AAB67037.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS5 1989-1997
Chemical type: Peptide from protein
Sequence: SDFKTWLKA
Position: 1989-1997
Source molecule (GenBank): AAB67037.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS5 1989-1997 variant
Chemical type: Peptide from protein
Sequence: SDFRTWLKA
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS5 1989-1997 variant
Chemical type: Peptide from protein
Sequence: SDFKVWLKA
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS4 1963-1972
Chemical type: Peptide from protein
Sequence: QWISSECTTPC
Position: 1962-1972
Source molecule (GenBank): AAB67037.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNEITP
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 18000.0

Epitope: NS3 1639-1648 variant
Chemical type: Peptide from protein
Sequence: DAAGRVTAIL
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 13570.0