LiteFold/IEDB huggingface dataset:
Reference: C Viret; C A Janeway. "Functional and phenotypic evidence for presentation of E alpha 52-68 structurally related self-peptide(s) in I-E alpha-deficient mice." Journal of immunology (Baltimore, Md. : 1950) (2000).

Epitope: Eα<sub>52-68</sub>
Chemical type: Peptide from protein
Sequence: ASFEAQGALANIAVDKA
Position: 52-68
Source molecule (GenBank): 1IEA_A
Assay category: BCell
Result: Positive

Epitope: Eα<sub>52-68</sub>
Chemical type: Peptide from protein
Sequence: ASFEAQGALANIAVDKA
Position: 52-68
Source molecule (GenBank): 1IEA_A
Assay category: TCell
Result: Positive
Host:  4-7 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: B Hemmer; T Kondo; B Gran; C Pinilla; I Cortese; J Pascal; A Tzou; H F McFarland; R Houghten; R Martin. "Minimal peptide length requirements for CD4(+) T cell clones--implications for molecular mimicry and T cell survival." International immunology (2000).

Epitope: MBP(86-96)
Chemical type: Peptide from protein
Sequence: VVHFFKNIVTP
Position: 87-97
Source molecule (GenBank): AAA59562.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: VVHFFKNVVIP
Chemical type: Peptide, no natural source
Sequence: VVHFFKNVVIP
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: VVHFFKNVVIK
Chemical type: Peptide, no natural source
Sequence: VVHFFKNVVIK
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: LIMFKNVVIK
Chemical type: Peptide, no natural source
Sequence: LIMFKNVVIK
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: VVIFFKNVVIK
Chemical type: Peptide, no natural source
Sequence: VVIFFKNVVIK
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: VIIFFKNVVIK
Chemical type: Peptide, no natural source
Sequence: VIIFFKNVVIK
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: FNIYKS
Chemical type: Peptide, no natural source
Sequence: FNIYKS
Assay category: TCell
Result: Positive
Host: M 33 years
Cell type: T cell CD4+
Tissue: cerebrospinal fluid (CSF)
Culture conditions: Cell Line / Clone

Epitope: IYKSVR
Chemical type: Peptide, no natural source
Sequence: IYKSVR
Assay category: TCell
Result: Positive
Host: M 33 years
Cell type: T cell CD4+
Tissue: cerebrospinal fluid (CSF)
Culture conditions: Cell Line / Clone

Epitope: VVI
Chemical type: Peptide, no natural source
Sequence: VVI
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: FFK
Chemical type: Peptide, no natural source
Sequence: FFK
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KNVVI
Chemical type: Peptide, no natural source
Sequence: KNVVI
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: D Kerjaschki; R Ullrich; M Exner; R A Orlando; M G Farquhar. "Induction of passive Heymann nephritis with antibodies specific for a synthetic peptide derived from the receptor-associated protein." The Journal of experimental medicine (1996).

Epitope: rRAP (40-44)
Chemical type: Peptide from protein
Sequence: VRLAE
Position: 40-44
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Positive

Epitope: rRAP (46-53)
Chemical type: Peptide from protein
Sequence: HSDLKIQE
Position: 46-53
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Positive

Epitope: rRAP (46-53)
Chemical type: Peptide from protein
Sequence: HSDLKIQE
Position: 46-53
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (39-44)
Chemical type: Peptide from protein
Sequence: PVRLAE
Position: 39-44
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Positive

Epitope: rRAP (39-44)
Chemical type: Peptide from protein
Sequence: PVRLAE
Position: 39-44
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Positive

Epitope: rRAP (31-44)
Chemical type: Peptide from protein
Sequence: KAKRLHLSPVRLAE
Position: 31-44
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Positive

Epitope: rRAP (31-44)
Chemical type: Peptide from protein
Sequence: KAKRLHLSPVRLAE
Position: 31-44
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (39-53)
Chemical type: Peptide from protein
Sequence: PVRLAELHSDLKIQE
Position: 39-53
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Positive

Epitope: rRAP (29-39)
Chemical type: Peptide from protein
Sequence: WEKAKRLHLSP
Position: 29-39
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (30-40)
Chemical type: Peptide from protein
Sequence: EKAKRLHLSPV
Position: 30-40
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (31-41)
Chemical type: Peptide from protein
Sequence: KAKRLHLSPVR
Position: 31-41
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (32-42)
Chemical type: Peptide from protein
Sequence: AKRLHLSPVRL
Position: 32-42
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (33-43)
Chemical type: Peptide from protein
Sequence: KRLHLSPVRLA
Position: 33-43
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (41-51)
Chemical type: Peptide from protein
Sequence: RLAELHSDLKI
Position: 41-51
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (42-52)
Chemical type: Peptide from protein
Sequence: LAELHSDLKIQ
Position: 42-52
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (47-57)
Chemical type: Peptide from protein
Sequence: SDLKIQERDEL
Position: 47-57
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative

Epitope: rRAP (48-58)
Chemical type: Peptide from protein
Sequence: DLKIQERDELN
Position: 48-58
Source molecule (GenBank): AAA41269.1
Assay category: BCell
Result: Negative
Reference: Masami Tanaka; Yoshie Maruyama; Miho Sugie; Hitoshi Motizuki; Keiko Kamakura; Keiko Tanaka. "Cytotoxic T cell activity against peptides of Hu protein in anti-Hu syndrome." Journal of the neurological sciences (2002).

Epitope: Hu-2 (265-273)
Chemical type: Peptide from protein
Sequence: PPSACSPRF
Position: 265-273
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-2 (265-273)
Chemical type: Peptide from protein
Sequence: PPSACSPRF
Position: 265-273
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-3 (96–104)
Chemical type: Peptide from protein
Sequence: DPKDAEKAI
Position: 96-104
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-3 (96–104)
Chemical type: Peptide from protein
Sequence: DPKDAEKAI
Position: 96-104
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-4 (198–206)
Chemical type: Peptide from protein
Sequence: KPSGATEPI
Position: 197-205
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-4 (198–206)
Chemical type: Peptide from protein
Sequence: KPSGATEPI
Position: 197-205
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-5 (270-278)
Chemical type: Peptide from protein
Sequence: SPRFSPITI
Position: 270-278
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hu-5 (270-278)
Chemical type: Peptide from protein
Sequence: SPRFSPITI
Position: 270-278
Source molecule (GenBank): P26378.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Mascha Binder; Friederike-Nora Vögtle; Stefan Michelfelder; Fabian Müller; Gerald Illerhaus; Sangeeth Sundararajan; Roland Mertelsmann; Martin Trepel. "Identification of their epitope reveals the structural basis for the mechanism of action of the immunosuppressive antibodies basiliximab and daclizumab." Cancer research (2007).

Epitope: CD25 116-122
Chemical type: Peptide from protein
Sequence: ERIYHFV
Position: 137-143
Source molecule (GenBank): P01589.1
Assay category: BCell
Result: Positive
Host: F 8 weeks

Epitope: CD25 116-122
Chemical type: Peptide from protein
Sequence: ERIYHFV
Position: 137-143
Source molecule (GenBank): P01589.1
Assay category: BCell
Result: Positive
Host: F 8 weeks

Epitope: CD25 116-122
Chemical type: Peptide from protein
Sequence: ERIYHFV
Position: 137-143
Source molecule (GenBank): P01589.1
Assay category: BCell
Result: Positive
Host: F 8 weeks

Epitope: CD25 116-122
Chemical type: Peptide from protein
Sequence: ERIYHFV
Position: 137-143
Source molecule (GenBank): P01589.1
Assay category: BCell
Result: Positive
Host: F 8 weeks
Reference: Federico Perosa; Grazia Luccarelli; Marcella Prete; Elvira Favoino; Soldano Ferrone; Franco Dammacco. "Beta 2-microglobulin-free HLA class I heavy chain epitope mimicry by monoclonal antibody HC-10-specific peptide." Journal of immunology (Baltimore, Md. : 1950) (2003).

Epitope: Phage 1
Chemical type: Peptide, no natural source
Sequence: NIAHPDRWDRLR
Assay category: BCell
Result: Positive
Host: M

Epitope: Phage 3/10
Chemical type: Peptide, no natural source
Sequence: SWTPDKWLRPSG
Assay category: BCell
Result: Positive
Host: M

Epitope: Phage 5
Chemical type: Peptide, no natural source
Sequence: ADNPIKWDRART
Assay category: BCell
Result: Positive
Host: M

Epitope: Phage 6
Chemical type: Peptide, no natural source
Sequence: LSNTANPWSWDR
Assay category: BCell
Result: Positive
Host: M

Epitope: Phage 7
Chemical type: Peptide, no natural source
Sequence: ASNWTDFRVTDR
Assay category: BCell
Result: Positive
Host: M

Epitope: Phage 8
Chemical type: Peptide, no natural source
Sequence: GMLPPQLFDRHH
Assay category: BCell
Result: Positive
Host: M

Epitope: Phage 9
Chemical type: Peptide, no natural source
Sequence: AEPFYSWDRASR
Assay category: BCell
Result: Positive
Host: M

Epitope: HLA-B7 Qp-1a
Chemical type: Peptide from protein
Sequence: QEGPEYWDRNT
Position: 77-87
Source molecule (GenBank): AAA59622.1
Assay category: BCell
Result: Positive
Host: M

Epitope: HLA-B7 Qp-1a
Chemical type: Peptide from protein
Sequence: QEGPEYWDRNT
Position: 77-87
Source molecule (GenBank): AAA59622.1
Assay category: BCell
Result: Positive
Host: M

Epitope: HLA-B7 p-1b
Chemical type: Peptide from protein
Sequence: EGPEYWDRET
Position: 79-88
Source molecule (GenBank): CAA27578.1
Assay category: BCell
Result: Positive
Host: M

Epitope: HLA-B7 p-1b
Chemical type: Peptide from protein
Sequence: EGPEYWDRET
Position: 79-88
Source molecule (GenBank): CAA27578.1
Assay category: BCell
Result: Positive
Host: M
Reference: V M Dabhi; K F Lindahl. "Short peptides sensitize target cells to CTL specific for the MHC class Ib molecule, H2-M3." European journal of immunology (1998).

Epitope: ND1-6I 7-mer
Chemical type: Peptide from protein
Sequence: MFFINIL
Position: 1-7
Source molecule (GenBank): AAA31948.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: COI 6-mer
Chemical type: Peptide from protein
Sequence: MFINRW
Position: 1-6
Source molecule (GenBank): P00397.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: spleen
Culture conditions: Cell Line / Clone
Reference: X Shen; R König. "Regulation of T cell immunity and tolerance in vivo by CD4." International immunology (1998).

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA(323-339)
Chemical type: Peptide from protein
Sequence: ISQAVHAAHAEINEAGR
Position: 324-340
Source molecule (GenBank): AAA48998.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: J C Guéry; L Adorini. "Dendritic cells are the most efficient in presenting endogenous naturally processed self-epitopes to class II-restricted T cells." Journal of immunology (Baltimore, Md. : 1950) (1995).

Epitope: mß<sub>2</sub>-m 26-39
Chemical type: Peptide from protein
Sequence: TQFHPPHIEIQML
Position: 48-60
Source molecule (GenBank): P01887.1
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: mß<sub>2</sub>-m 26-39
Chemical type: Peptide from protein
Sequence: TQFHPPHIEIQML
Position: 48-60
Source molecule (GenBank): P01887.1
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: mß<sub>2</sub>-m 26-35
Chemical type: Peptide from protein
Sequence: TQFHPPHI
Position: 48-55
Source molecule (GenBank): P01887.1
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: mß<sub>2</sub>-m 24-36
Chemical type: Peptide from protein
Sequence: NCYTQFHPPHIE
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: J C Guéry; M Neagu; G Rodriguez-Tarduchy; L Adorini. "Selective immunosuppression by administration of major histocompatibility complex class II-binding peptides. II. Preventive inhibition of primary and secondary in vivo antibody responses." The Journal of experimental medicine (1993).

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: BCell
Result: Positive
Host:  2-3 months

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: BCell
Result: Positive
Host:  2-3 months

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: TCell
Result: Negative
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ML 46-62
Chemical type: Peptide from protein
Sequence: DRGDQSTDYGIFQINSR
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HEL 46-61
Chemical type: Peptide from protein
Sequence: NTDGSTDYGILQINSR
Position: 46-61
Source molecule (GenBank): 1LKS_A
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: HEL 46-61
Chemical type: Peptide from protein
Sequence: NTDGSTDYGILQINSR
Position: 46-61
Source molecule (GenBank): 1LKS_A
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HEL 108-116
Chemical type: Peptide from protein
Sequence: WVAWRNRCK
Position: 108-116
Source molecule (GenBank): 1LKS_A
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: HEL 1-18
Chemical type: Peptide from protein
Sequence: KVFGRCELAAAMKRHGLD
Position: 1-18
Source molecule (GenBank): 1LKS_A
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HEL 112-129
Chemical type: Peptide from protein
Sequence: RNRCKGTDVQAWIRGARL
Assay category: TCell
Result: Positive
Host:  2-3 months
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Steffen Walter; Gilles Bioley; Hans-Jörg Bühring; Sven Koch; Dorothee Wernet; Alfred Zippelius; Graham Pawelec; Pedro Romero; Stefan Stevanović; Hans-Georg Rammensee; Cécile Gouttefangeas. "High frequencies of functionally impaired cytokeratin 18-specific CD8+ T cells in healthy HLA-A2+ donors." European journal of immunology (2005).

Epitope: A2/Ker
Chemical type: Peptide from protein
Sequence: ALLNIKVKL
Position: 365-373
Source molecule (GenBank): P05783.2
Assay category: TCell
Result: Positive
MHC allele types: 235
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A2/Ker
Chemical type: Peptide from protein
Sequence: ALLNIKVKL
Position: 365-373
Source molecule (GenBank): P05783.2
Assay category: TCell
Result: Negative
MHC allele types: 235
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A2/Ker
Chemical type: Peptide from protein
Sequence: ALLNIKVKL
Position: 365-373
Source molecule (GenBank): P05783.2
Assay category: TCell
Result: Negative
MHC allele types: 235
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: A2/Ker
Chemical type: Peptide from protein
Sequence: ALLNIKVKL
Position: 365-373
Source molecule (GenBank): P05783.2
Assay category: TCell
Result: Negative
MHC allele types: 235
Cell type: T cell CD8+
Tissue: umbilical cord blood
Culture conditions: Direct Ex Vivo
Reference: Gema Díaz; Massimo Amicosante; Dolores Jaraquemada; Richard H Butler; M Victoria Guillén; Miguel Sánchez; César Nombela; Javier Arroyo. "Functional analysis of HLA-DP polymorphism: a crucial role for DPbeta residues 9, 11, 35, 55, 56, 69 and 84-87 in T cell allorecognition and peptide binding." International immunology (2003).

Epitope: IIP (53-65)
Chemical type: Peptide from protein
Sequence: VPDHVVWSLFNTL
Position: 53-65
Source molecule (GenBank): NP_006426.2
Assay category: MhcBinding
Result: Positive
Reference: P E Fielding; M Kawano; A L Catapano; A Zoppo; S Marcovina; C J Fielding. "Unique epitope of apolipoprotein A-I expressed in pre-beta-1 high-density lipoprotein and its role in the catalyzed efflux of cellular cholesterol." Biochemistry (1994).

Epitope: apo A-I (137-144)
Chemical type: Peptide from protein
Sequence: LQEKLSPL
Position: 161-168
Source molecule (GenBank): P02647.1
Assay category: BCell
Result: Positive

Epitope: apo A-I (93-99)
Chemical type: Peptide from protein
Sequence: VKAKVQP
Position: 117-123
Source molecule (GenBank): P02647.1
Assay category: BCell
Result: Positive

Epitope: apo A-I (113-128)
Chemical type: Peptide from protein
Sequence: ELYRQKVEPLRAELQE
Position: 137-152
Source molecule (GenBank): P02647.1
Assay category: BCell
Result: Positive

Epitope: apo A-I (167-174)
Chemical type: Peptide from protein
Sequence: SDELRQRL
Position: 191-198
Source molecule (GenBank): P02647.1
Assay category: BCell
Result: Positive
Reference: S G Young; R K Koduri; R K Austin; D J Bonnet; R S Smith; L K Curtiss. "Definition of a nonlinear conformational epitope for the apolipoprotein B-100-specific monoclonal antibody, MB47." Journal of lipid research (1994).

Epitope: ApoB-100
Chemical type: Discontinuous protein residues
Discontinuous residues: T3429, K3430, A3431, Q3432, I3433, P3434, I3435, L3436, R3437, M3438, N3439, F3440, K3441, Q3442, E3443, L3444, N3445, G3446, N3447, T3448, K3449, S3450, K3451, P3452, T3453, R3507, E3508, Y3509, S3510, G3511, T3512, I3513, A3514, S3515, E3516, A3517, N3518, T3519, Y3520, L3521, N3522, S3523
Source molecule (GenBank): NP_000375.2
Assay category: BCell
Result: Positive

Epitope: ApoB-100
Chemical type: Discontinuous protein residues
Discontinuous residues: T3429, K3430, A3431, Q3432, I3433, P3434, I3435, L3436, R3437, M3438, N3439, F3440, K3441, Q3442, E3443, L3444, N3445, G3446, N3447, T3448, K3449, S3450, K3451, P3452, T3453, R3507, E3508, Y3509, S3510, G3511, T3512, I3513, A3514, S3515, E3516, A3517, N3518, T3519, Y3520, L3521, N3522, S3523
Source molecule (GenBank): NP_000375.2
Assay category: BCell
Result: Positive