Reference: Kenji Murata; Munehide Nakatsugawa; Muhammed A Rahman; Linh T Nguyen; Douglas G Millar; David T Mulder; Kenji Sugata; Hiroshi Saijo; Yukiko Matsunaga; Yuki Kagoya; Tingxi Guo; Mark Anczurowski; Chung-Hsi Wang; Brian D Burt; Dalam Ly; Kayoko Saso; Alexandra Easson; David P Goldstein; Michael Reedijk; Danny Ghazarian; Trevor J Pugh; Marcus O Butler; Tak W Mak; Pamela S Ohashi; Naoto Hirano. "Landscape mapping of shared antigenic epitopes and their cognate TCRs of tumor-infiltrating T lymphocytes in melanoma." eLife (2020).

Epitope: Survivin Peptide 123
Chemical type: Peptide from protein
Sequence: EFEETAKKVRRAIEQLAAMD
Position: 123-142
Source molecule (GenBank): O15392.3
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 1
Chemical type: Peptide from protein
Sequence: MNGDDAFARRPTVGAQIPEK
Position: 1-20
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 6
Chemical type: Peptide from protein
Sequence: AFARRPTVGAQIPEKIQKAF
Position: 6-25
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 11
Chemical type: Peptide from protein
Sequence: PTVGAQIPEKIQKAFDDIAK
Position: 11-30
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 26
Chemical type: Peptide from protein
Sequence: DDIAKYFSKEEWEKMKASEK
Position: 26-45
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 31
Chemical type: Peptide from protein
Sequence: YFSKEEWEKMKASEKIFYVY
Position: 31-50
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 36
Chemical type: Peptide from protein
Sequence: EWEKMKASEKIFYVYMKRKY
Position: 36-55
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 41
Chemical type: Peptide from protein
Sequence: KASEKIFYVYMKRKYEAMTK
Position: 41-60
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 46
Chemical type: Peptide from protein
Sequence: IFYVYMKRKYEAMTKLGFKA
Position: 46-65
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 61
Chemical type: Peptide from protein
Sequence: LGFKATLPPFMCNKRAEDFQ
Position: 61-80
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 66
Chemical type: Peptide from protein
Sequence: TLPPFMCNKRAEDFQGNDLD
Position: 66-85
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 71
Chemical type: Peptide from protein
Sequence: MCNKRAEDFQGNDLDNDPNR
Position: 71-90
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 76
Chemical type: Peptide from protein
Sequence: AEDFQGNDLDNDPNRGNQVE
Position: 76-95
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 81
Chemical type: Peptide from protein
Sequence: GNDLDNDPNRGNQVERPQMT
Position: 81-100
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 86
Chemical type: Peptide from protein
Sequence: NDPNRGNQVERPQMTFGRLQ
Position: 86-105
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 91
Chemical type: Peptide from protein
Sequence: GNQVERPQMTFGRLQGISPK
Position: 91-110
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 96
Chemical type: Peptide from protein
Sequence: RPQMTFGRLQGISPKIMPKK
Position: 96-115
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 101
Chemical type: Peptide from protein
Sequence: FGRLQGISPKIMPKKPAEEG
Position: 101-120
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 106
Chemical type: Peptide from protein
Sequence: GISPKIMPKKPAEEGNDSEE
Position: 106-125
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 111
Chemical type: Peptide from protein
Sequence: IMPKKPAEEGNDSEEVPEAS
Position: 111-130
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 116
Chemical type: Peptide from protein
Sequence: PAEEGNDSEEVPEASGPQND
Position: 116-135
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 121
Chemical type: Peptide from protein
Sequence: NDSEEVPEASGPQNDGKELC
Position: 121-140
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 126
Chemical type: Peptide from protein
Sequence: VPEASGPQNDGKELCPPGKP
Position: 126-145
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 136
Chemical type: Peptide from protein
Sequence: GKELCPPGKPTTSEKIHERS
Position: 136-155
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 141
Chemical type: Peptide from protein
Sequence: PPGKPTTSEKIHERSGPKRG
Position: 141-160
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 146
Chemical type: Peptide from protein
Sequence: TTSEKIHERSGPKRGEHAWT
Position: 146-165
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 151
Chemical type: Peptide from protein
Sequence: IHERSGPKRGEHAWTHRLRE
Position: 151-170
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 156
Chemical type: Peptide from protein
Sequence: GPKRGEHAWTHRLRERKQLV
Position: 156-175
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 161
Chemical type: Peptide from protein
Sequence: EHAWTHRLRERKQLVIYEEI
Position: 161-180
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 166
Chemical type: Peptide from protein
Sequence: HRLRERKQLVIYEEISDPEE
Position: 166-185
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: SSX2 Peptide 169
Chemical type: Peptide from protein
Sequence: RERKQLVIYEEISDPEEDDE
Position: 169-188
Source molecule (GenBank): Q16385.2
Assay category: TCell
Result: Negative
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: MART-1 Peptide 16
Chemical type: Peptide from protein
Sequence: GHGHSYTTAEEAAGIGILTV
Position: 16-35
Source molecule (GenBank): Q16655.1
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 Peptide 81
Chemical type: Peptide from protein
Sequence: RGPESRLLEFYLAMPFATPM
Position: 81-100
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 Peptide 86
Chemical type: Peptide from protein
Sequence: RLLEFYLAMPFATPMEAELA
Position: 86-105
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 Peptide 91
Chemical type: Peptide from protein
Sequence: YLAMPFATPMEAELARRSLA
Position: 91-110
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: NY-ESO-1 Peptide 121
Chemical type: Peptide from protein
Sequence: VLLKEFTVSGNILTIRLTAA
Position: 121-140
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Short Term Restimulated

Epitope: gp100 Peptide 181
Chemical type: Peptide from protein
Sequence: THTMEVTVYHRRGSRSYVPL
Position: 181-200
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: gp100 Peptide 441
Chemical type: Peptide from protein
Sequence: ASSIMSTESITGSLGPLLDG
Position: 441-460
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: gp100 Peptide 446
Chemical type: Peptide from protein
Sequence: STESITGSLGPLLDGTATLR
Position: 446-465
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive-High
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: MART-1 Peptide 21
Chemical type: Peptide from protein
Sequence: YTTAEEAAGIGILTVILGVL
Position: 21-40
Source molecule (GenBank): Q16655.1
Assay category: TCell
Result: Positive-Intermediate
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: gp100 Peptide 186
Chemical type: Peptide from protein
Sequence: VTVYHRRGSRSYVPLAHSSS
Position: 186-205
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive-Intermediate
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: gp100 Peptide 471
Chemical type: Peptide from protein
Sequence: VPLDCVLYRYGSFSVTLDIV
Position: 471-490
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive-Intermediate
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Short Term Restimulated

Epitope: gp100 Peptide 476
Chemical type: Peptide from protein
Sequence: VLYRYGSFSVTLDIVQGIES
Position: 476-495
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive-Intermediate
MHC allele types: 142 143 215 224 544 251 252 28 33 256 540 185 36 190 40 310 1 8 3 306 311 6 960 308
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Short Term Restimulated

Epitope: B*44:02 Peptide 24
Chemical type: Peptide, no natural source
Sequence: EEKLIVVLF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: Tyrosinase 369
Chemical type: Peptide from protein
Sequence: YMDGTMSQV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo

Epitope: Tyrosinase 369
Chemical type: Peptide from protein
Sequence: YMDGTMSQV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Short Term Restimulated