Reference: Ryan W Nelson; Daniel Beisang; Noah J Tubo; Thamotharampillai Dileepan; Darin L Wiesner; Kirsten Nielsen; Marcel Wüthrich; Bruce S Klein; Dmitri I Kotov; Justin A Spanier; Brian T Fife; James J Moon; Marc K Jenkins. "T cell receptor cross-reactivity between similar foreign and self peptides influences naive cell population size and autoimmunity." Immunity (2015).

Epitope: ESAT6
Chemical type: Peptide from protein
Sequence: QQWNFAGIEAAASA
Position: 4-17
Source molecule (GenBank): WP_034162443.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: ESAT6
Chemical type: Peptide from protein
Sequence: QQWNFAGIEAAASA
Position: 4-17
Source molecule (GenBank): WP_034162443.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: FliC
Chemical type: Peptide from protein
Sequence: VQNRFNSAITNLGNT
Position: 429-443
Source molecule (GenBank): P06179.4
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: FliC
Chemical type: Peptide from protein
Sequence: VQNRFNSAITNLGNT
Position: 429-443
Source molecule (GenBank): P06179.4
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: FliC
Chemical type: Peptide from protein
Sequence: VQNRFNSAITNLGNT
Position: 429-443
Source molecule (GenBank): P06179.4
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: STM1540-3#
Chemical type: Peptide from protein
Sequence: VYYTTYAPQAT
Position: 263-273
Source molecule (GenBank): NP_460500.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: STM1540-3#
Chemical type: Peptide from protein
Sequence: VYYTTYAPQAT
Position: 263-273
Source molecule (GenBank): NP_460500.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: STM1540-1#
Chemical type: Peptide from protein
Sequence: YTTYAPQATSA
Position: 265-275
Source molecule (GenBank): NP_460500.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: STM1540-1#
Chemical type: Peptide from protein
Sequence: YTTYAPQATSA
Position: 265-275
Source molecule (GenBank): NP_460500.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: eGFP
Chemical type: Peptide from protein
Sequence: HDFFKSAMPEGYVQE
Position: 81-95
Source molecule (GenBank): P42212.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: eGFP
Chemical type: Peptide from protein
Sequence: HDFFKSAMPEGYVQE
Position: 81-95
Source molecule (GenBank): P42212.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA3C#
Chemical type: Peptide from protein
Sequence: GHAAHAEINEA
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA3C#
Chemical type: Peptide from protein
Sequence: GHAAHAEINEA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: RplF
Chemical type: Peptide from protein
Sequence: FVSPAAHII
Position: 51-59
Source molecule (GenBank): NP_297174.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: RplF
Chemical type: Peptide from protein
Sequence: FVSPAAHII
Position: 51-59
Source molecule (GenBank): NP_297174.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA2C#
Chemical type: Peptide from protein
Sequence: QAVHAAHAEIN
Position: 326-336
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: OVA2C#
Chemical type: Peptide from protein
Sequence: QAVHAAHAEIN
Position: 326-336
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 3K
Chemical type: Peptide, no natural source
Sequence: EAQKAKANKAVDKA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 3K
Chemical type: Peptide, no natural source
Sequence: EAQKAKANKAVDKA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 3K
Chemical type: Peptide, no natural source
Sequence: EAQKAKANKAVDKA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 3K
Chemical type: Peptide, no natural source
Sequence: EAQKAKANKAVDKA
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Calnexin
Chemical type: Peptide from protein
Sequence: LVVKNPAAHHAIS
Position: 103-115
Source molecule (GenBank): EEQ88189.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Calnexin
Chemical type: Peptide from protein
Sequence: LVVKNPAAHHAIS
Position: 103-115
Source molecule (GenBank): EEQ88189.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Calnexin
Chemical type: Peptide from protein
Sequence: LVVKNPAAHHAIS
Position: 103-115
Source molecule (GenBank): EEQ88189.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: AasF
Chemical type: Peptide from protein
Sequence: VSSPAVQES
Position: 24-32
Source molecule (GenBank): NP_297081.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: AasF
Chemical type: Peptide from protein
Sequence: VSSPAVQES
Position: 24-32
Source molecule (GenBank): NP_297081.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: AasF
Chemical type: Peptide from protein
Sequence: VSSPAVQES
Position: 24-32
Source molecule (GenBank): NP_297081.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 1G1W
Chemical type: Peptide, no natural source
Sequence: EAGGALANWAVDSA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 1G1W
Chemical type: Peptide, no natural source
Sequence: EAGGALANWAVDSA
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: LLO#
Chemical type: Peptide from protein
Sequence: NEKYAQAYPNVS
Position: 190-201
Source molecule (GenBank): P13128.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: LLO#
Chemical type: Peptide from protein
Sequence: NEKYAQAYPNVS
Position: 190-201
Source molecule (GenBank): P13128.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: LLO#
Chemical type: Peptide from protein
Sequence: NEKYAQAYPNVS
Position: 190-201
Source molecule (GenBank): P13128.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: LLO#
Chemical type: Peptide from protein
Sequence: NEKYAQAYPNVS
Position: 190-201
Source molecule (GenBank): P13128.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Derp1
Chemical type: Peptide from protein
Sequence: CQIYPPNVNKI
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Derp1
Chemical type: Peptide from protein
Sequence: CQIYPPNVNKI
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Derp1
Chemical type: Peptide from protein
Sequence: CQIYPPNVNKI
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Cda2
Chemical type: Peptide from protein
Sequence: HQYMTALSNEVVF
Position: 218-230
Source molecule (GenBank): AFR94916.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Cda2
Chemical type: Peptide from protein
Sequence: HQYMTALSNEVVF
Position: 218-230
Source molecule (GenBank): AFR94916.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Cda2
Chemical type: Peptide from protein
Sequence: HQYMTALSNEVVF
Position: 218-230
Source molecule (GenBank): AFR94916.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PmpG-1
Chemical type: Peptide from protein
Sequence: YVDPAAAGG
Position: 303-311
Source molecule (GenBank): NP_296642.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PmpG-1
Chemical type: Peptide from protein
Sequence: YVDPAAAGG
Position: 303-311
Source molecule (GenBank): NP_296642.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PmpG-1
Chemical type: Peptide from protein
Sequence: YVDPAAAGG
Position: 303-311
Source molecule (GenBank): NP_296642.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: CTB
Chemical type: Peptide from protein
Sequence: NNKTPHAIAAIS
Position: 110-121
Source molecule (GenBank): P01556.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: CTB
Chemical type: Peptide from protein
Sequence: NNKTPHAIAAIS
Position: 110-121
Source molecule (GenBank): P01556.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: CTB
Chemical type: Peptide from protein
Sequence: NNKTPHAIAAIS
Position: 110-121
Source molecule (GenBank): P01556.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: GP66
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): ABC96001.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: GP66
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): ABC96001.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: GP66
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): ABC96001.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: GP66
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): ABC96001.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: GP66
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): ABC96001.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: CD4Ag28m
Chemical type: Peptide from protein
Sequence: VEIHRPVPGTA
Position: 606-616
Source molecule (GenBank): EEE21859.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: CD4Ag28m
Chemical type: Peptide from protein
Sequence: VEIHRPVPGTA
Position: 606-616
Source molecule (GenBank): EEE21859.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: CD4Ag28m
Chemical type: Peptide from protein
Sequence: VEIHRPVPGTA
Position: 606-616
Source molecule (GenBank): EEE21859.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 2W109#
Chemical type: Peptide, no natural source
Sequence: EYWGPLPNWV
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 2W109#
Chemical type: Peptide, no natural source
Sequence: EYWGPLPNWV
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 2W109#
Chemical type: Peptide, no natural source
Sequence: EYWGPLPNWV
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG#
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVVHLY
Position: 38-51
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive

Epitope: MOG#
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVVHLY
Position: 38-51
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG#
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVVHLY
Position: 38-51
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG#
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVVHLY
Position: 38-51
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG#
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVVHLY
Position: 38-51
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG#
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVVHLY
Position: 38-51
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Cre
Chemical type: Peptide from protein
Sequence: WFPAEPEDV
Position: 6-14
Source molecule (GenBank): CDL28017.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: M. odoratimimus peptide
Chemical type: Peptide from protein
Sequence: YQKVKANKG
Position: 60-68
Source molecule (GenBank): WP_006262140.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L. byssophila peptide
Chemical type: Peptide from protein
Sequence: YKGTYPFKN
Position: 510-518
Source molecule (GenBank): WP_013409241.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: X. alblineans peptide
Chemical type: Peptide from protein
Sequence: YWSVLPNWA
Position: 196-204
Source molecule (GenBank): WP_012917511.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L. amylovorus peptide
Chemical type: Peptide from protein
Sequence: YKWTYPFKA
Position: 49-57
Source molecule (GenBank): WP_013438085.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: D. acetoxidans peptide
Chemical type: Peptide from protein
Sequence: FWLPLSNWA
Position: 14-22
Source molecule (GenBank): WP_041284343.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: H. ducreyi peptide
Chemical type: Peptide from protein
Sequence: PWQPLANWY
Position: 56-64
Source molecule (GenBank): WP_010945386.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: R. palustris peptide
Chemical type: Peptide from protein
Sequence: WPPLVNWA
Position: 162-169
Source molecule (GenBank): WP_011504054.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: M. tractuosa peptide
Chemical type: Peptide from protein
Sequence: YRASFPRVR
Position: 145-153
Source molecule (GenBank): WP_013455750.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: M. tractuosa peptide
Chemical type: Peptide from protein
Sequence: YRASFPRVR
Position: 145-153
Source molecule (GenBank): WP_013455750.1
Assay category: TCell
Result: Positive

Epitope: A. ferrooxidans peptide
Chemical type: Peptide from protein
Sequence: YREAFARVR
Position: 730-738
Source molecule (GenBank): WP_041645713.1
Assay category: TCell
Result: Positive-Low

Epitope: A. ferrooxidans peptide
Chemical type: Peptide from protein
Sequence: YREAFARVR
Position: 730-738
Source molecule (GenBank): WP_041645713.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P. ferrooxidans peptide
Chemical type: Peptide from protein
Sequence: YRDAFARVA
Position: 8-16
Source molecule (GenBank): WP_008952588.1
Assay category: TCell
Result: Negative

Epitope: P. ferrooxidans peptide
Chemical type: Peptide from protein
Sequence: YRDAFARVA
Position: 8-16
Source molecule (GenBank): WP_008952588.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Rhodopseudomonas palustris peptide 2
Chemical type: Peptide from protein
Sequence: IWPPLVNWA
Position: 161-169
Source molecule (GenBank): WP_011504054.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo