Reference: Snigdha Majumder; Rakshit Shah; Jisha Elias; Yogesh Mistry; Karunakaran Coral; Priyanka Shah; Anand Kumar Maurya; Bharti Mittal; Jason K D'Silva; Sakthivel Murugan; Lakshmi Mahadevan; Rekha Sathian; V L Ramprasad; Papia Chakraborty; Ravi Gupta; Amitabha Chaudhuri; Arati Khanna-Gupta. "A neoepitope derived from a novel human germline APC gene mutation in familial adenomatous polyposis shows selective immunogenicity." PloS one (2018).

Epitope: S246Ffs6x-Mut
Chemical type: Peptide, no natural source
Sequence: QATEAERSF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: S246Ffs6x-Mut
Chemical type: Peptide, no natural source
Sequence: QATEAERSF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: S246Ffs6x-Mut
Chemical type: Peptide, no natural source
Sequence: QATEAERSF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.Q1193fsX14-Mut
Chemical type: Peptide, no natural source
Sequence: IPSSQKVIF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.Q1193fsX14-Mut
Chemical type: Peptide, no natural source
Sequence: IPSSQKVIF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.Q1193fsX14-Wt
Chemical type: Peptide from protein
Sequence: IPSSQKQSF
Position: 1187-1195
Source molecule (GenBank): P25054.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.Q1193fsX14-Wt
Chemical type: Peptide from protein
Sequence: IPSSQKQSF
Position: 1187-1195
Source molecule (GenBank): P25054.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.K1250fsX5-Mut
Chemical type: Peptide, no natural source
Sequence: KAATCSFFY
Assay category: TCell
Result: Negative
MHC allele types: 213 195
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.K1250fsX5-Mut
Chemical type: Peptide, no natural source
Sequence: KAATCSFFY
Assay category: TCell
Result: Negative
MHC allele types: 213 195
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.K1250fsX5-Wt
Chemical type: Peptide from protein
Sequence: KAATCKVSS
Position: 1245-1253
Source molecule (GenBank): P25054.2
Assay category: TCell
Result: Negative
MHC allele types: 213 195
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.K1250fsX5-Wt
Chemical type: Peptide from protein
Sequence: KAATCKVSS
Position: 1245-1253
Source molecule (GenBank): P25054.2
Assay category: TCell
Result: Negative
MHC allele types: 213 195
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.G1339fsX76-Mut
Chemical type: Peptide, no natural source
Sequence: HPKVHLNTM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.G1339fsX76-Mut
Chemical type: Peptide, no natural source
Sequence: HPKVHLNTM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.Q541fsX19-Mut
Chemical type: Peptide, no natural source
Sequence: GYCECFEEF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.Q541fsX19-Mut
Chemical type: Peptide, no natural source
Sequence: GYCECFEEF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.V609fsX25-Mut
Chemical type: Peptide, no natural source
Sequence: EPDKHFSHY
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p.V609fsX25-Mut
Chemical type: Peptide, no natural source
Sequence: EPDKHFSHY
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated