LiteFold/IEDB huggingface dataset:
Reference: Jonathan A Coleman; Dongxue Yang; Zhiyu Zhao; Po-Chao Wen; Craig Yoshioka; Emad Tajkhorshid; Eric Gouaux. "Serotonin transporter-ibogaine complexes illuminate mechanisms of inhibition and transport." Nature (2019).

Epitope: Epitope of 8B6 scFv on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: F213, E215, D216, I218, T219, W220, T221, L222, H223, W306, R307, K314, E388, R390, N391, E392, D393, E396, R564
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 8B6 scFv on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: F213, E215, D216, I218, T219, W220, T221, L222, H223, W306, R307, K314, E388, R390, N391, E392, D393, E396, R564
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 15B8 Fab on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y185, S199, C200, K201, N202, S203, W204, N205, T206, G207, C209, N211, T210, Y212, D216, N217, R234, H235, Q238, H240, R241
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 15B8 Fab on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y185, S199, C200, K201, N202, S203, W204, N205, T206, G207, C209, N211, T210, Y212, D216, N217, R234, H235, Q238, H240, R241
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 15B8 Fab on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y185, S199, C200, K201, N202, S203, W204, N205, T206, G207, C209, N211, T210, Y212, D216, N217, R234, H235, Q238, H240, R241
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 15B8 Fab on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y185, S199, C200, K201, N202, S203, W204, N205, T206, G207, C209, N211, T210, Y212, D216, N217, R234, H235, Q238, H240, R241
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 15B8 Fab on Na-dependent serotonin transporter (SERT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y185, S199, C200, K201, N202, S203, W204, N205, T206, G207, C209, N211, T210, Y212, D216, N217, R234, H235, Q238, H240, R241
Source molecule (GenBank): P31645.1
Assay category: BCell
Result: Positive
Reference: Ansha Luthra; David B Langley; Peter Schofield; Jennifer Jackson; Mahmoud Abdelatti; Romain Rouet; Damien Nevoltris; Ohan Mazigi; Ben Crossett; Mary Christie; Daniel Christ. "Human Antibody Bispecifics through Phage Display Selection." Biochemistry (2019).

Epitope: Epitope of trastuzumab on HER2
Chemical type: Discontinuous protein residues
Discontinuous residues: P579, E580, A581, D582, Q583, D592, P593, P594, F595, K615, F616, P617, D618, E619, E620, G621, A622, C623, Q624, P625
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.77
Host: F

Epitope: Epitope of trastuzumab on HER2
Chemical type: Discontinuous protein residues
Discontinuous residues: P579, E580, A581, D582, Q583, D592, P593, P594, F595, K615, F616, P617, D618, E619, E620, G621, A622, C623, Q624, P625
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive
Quantitative measurement: 275000.0
Host: F

Epitope: Epitope of trastuzumab on HER2
Chemical type: Discontinuous protein residues
Discontinuous residues: P579, E580, A581, D582, Q583, D592, P593, P594, F595, K615, F616, P617, D618, E619, E620, G621, A622, C623, Q624, P625
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00131
Host: F
Reference: Craig Fenwick; Juan-Luis Loredo-Varela; Victor Joo; Céline Pellaton; Alex Farina; Navina Rajah; Line Esteves-Leuenberger; Thibaut Decaillon; Madeleine Suffiotti; Alessandra Noto; Khalid Ohmiti; Raphael Gottardo; Winfried Weissenhorn; Giuseppe Pantaleo. "Tumor suppression of novel anti-PD-1 antibodies mediated through CD28 costimulatory pathway." The Journal of experimental medicine (2019).

Epitope: Epitope of NB01a (135C12) Fab on hPD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: P34, T36, F37, S38, P39, A40, L41, L42, V43, E136, S137, L138, R139, R143
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive

Epitope: Epitope of NB01a (135C12) Fab on hPD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: P34, T36, F37, S38, P39, A40, L41, L42, V43, E136, S137, L138, R139, R143
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.2

Epitope: Epitope of NB01a (135C12) Fab on hPD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: P34, T36, F37, S38, P39, A40, L41, L42, V43, E136, S137, L138, R139, R143
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive

Epitope: Epitope of NB01a (135C12) Fab on hPD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: P34, T36, F37, S38, P39, A40, L41, L42, V43, E136, S137, L138, R139, R143
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive

Epitope: Epitope of NB01a (135C12) Fab on hPD-1
Chemical type: Discontinuous protein residues
Discontinuous residues: P34, T36, F37, S38, P39, A40, L41, L42, V43, E136, S137, L138, R139, R143
Source molecule (GenBank): Q15116.3
Assay category: BCell
Result: Positive
Reference: Jingshan Ren; Joanne E Nettleship; Gemma Harris; William Mwangi; Nahid Rhaman; Clare Grant; Abhay Kotecha; Elizabeth Fry; Bryan Charleston; David I Stuart; John Hammond; Raymond J Owens. "The role of the light chain in the structure and binding activity of two cattle antibodies that neutralize bovine respiratory syncytial virus." Molecular immunology (2019).

Epitope: Epitope of B4 on human RSV F
Chemical type: Peptide from protein
Sequence: SELLSLINDMPITNDQKKLMS
Position: 255-275
Source molecule (GenBank): P12568.1
Assay category: BCell
Result: Positive
Quantitative measurement: 86.0
Host:  10 months

Epitope: Epitope of B4 on human RSV F
Chemical type: Peptide from protein
Sequence: SELLSLINDMPITNDQKKLMS
Position: 255-275
Source molecule (GenBank): P12568.1
Assay category: BCell
Result: Positive
Host:  10 months

Epitope: Epitope of B13 on human RSV F
Chemical type: Peptide from protein
Sequence: YGKTKCTASNKNRGIIKTFSNG
Position: 417-438
Source molecule (GenBank): P12568.1
Assay category: BCell
Result: Positive
Quantitative measurement: 125.0
Host:  10 months

Epitope: Epitope of B13 on human RSV F
Chemical type: Peptide from protein
Sequence: YGKTKCTASNKNRGIIKTFSNG
Position: 417-438
Source molecule (GenBank): P12568.1
Assay category: BCell
Result: Positive
Host:  10 months
Reference: Till Schoofs; Christopher O Barnes; Nina Suh-Toma; Jovana Golijanin; Philipp Schommers; Henning Gruell; Anthony P West; Franziska Bach; Yu Erica Lee; Lilian Nogueira; Ivelin S Georgiev; Robert T Bailer; Julie Czartoski; John R Mascola; Michael S Seaman; M Juliana McElrath; Nicole A Doria-Rose; Florian Klein; Michel C Nussenzweig; Pamela J Bjorkman. "Broad and Potent Neutralizing Antibodies Recognize the Silent Face of the HIV Envelope." Immunity (2019).

Epitope: Epitope of SF12 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: D55, K57, A58, I222, P223, R261, N304, R448, N452
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Host: M

Epitope: Epitope of SF12 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: D55, K57, A58, I222, P223, R261, N304, R448, N452
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Host: M

Epitope: Epitope of SF12 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: D55, K57, A58, I222, P223, R261, N304, R448, N452
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Host: M

Epitope: Epitope of SF12 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: D55, K57, A58, I222, P223, R261, N304, R448, N452
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Host: M

Epitope: Epitope of SF12 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: D55, K57, A58, I222, P223, R261, N304, R448, N452
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Host: M

Epitope: Epitope of SF12 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: D55, K57, A58, I222, P223, R261, N304, R448, N452
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Host: M

Epitope: Epitope of 10-1074 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N133, T134, N135, I330, G332, N333, I334, R335, Q336, Q421
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 10-1074 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N133, T134, N135, I330, G332, N333, I334, R335, Q336, Q421
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 10-1074 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N133, T134, N135, I330, G332, N333, I334, R335, Q336, Q421
Source molecule (GenBank): ACE67267.1
Assay category: BCell
Result: Positive
Reference: Cassandra A Simonich; Laura Doepker; Duncan Ralph; James A Williams; Amrit Dhar; Zak Yaffe; Lauren Gentles; Christopher T Small; Brian Oliver; Vladimir Vigdorovich; Vidya Mangala Prasad; Ruth Nduati; D Noah Sather; Kelly K Lee; Frederick A Matsen Iv; Julie Overbaugh. "Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage." Nature communications (2019).

Epitope: Epitope of BF520.1 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N136, I137, T138, I321, G322, D323, I324, R325
Source molecule (GenBank): Q2N0S6.1
Assay category: BCell
Result: Positive
Host:  15 months

Epitope: Epitope of BF520.1 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N136, I137, T138, I321, G322, D323, I324, R325
Source molecule (GenBank): Q2N0S6.1
Assay category: BCell
Result: Positive
Host:  15 months

Epitope: Epitope of BF520.1 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N136, I137, T138, I321, G322, D323, I324, R325
Source molecule (GenBank): Q2N0S6.1
Assay category: BCell
Result: Positive
Host:  15 months

Epitope: Epitope of BF520.1 Fab on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: N136, I137, T138, I321, G322, D323, I324, R325
Source molecule (GenBank): Q2N0S6.1
Assay category: BCell
Result: Positive
Host:  15 months
Reference: Peter E Deak; Baksun Kim; Byunghee Koh; Amina Abdul Qayum; Tanyel Kiziltepe; Mark H Kaplan; Basar Bilgicer. "Covalent Heterobivalent Inhibitor Design for Inhibition of IgE-Dependent Penicillin Allergy in a Murine Model." Journal of immunology (Baltimore, Md. : 1950) (2019).

Epitope: benzylpenicilloyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 960.0

Epitope: benzylpenicilloyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: benzylpenicilloyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 7-8 weeks

Epitope: benzylpenicilloyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 7-8 weeks

Epitope: benzylpenicilloyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 7-8 weeks

Epitope: dansyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 6400.0

Epitope: dansyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 7-8 weeks

Epitope: dansyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 7-8 weeks

Epitope: dansyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 7-8 weeks

Epitope: dansyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Reference: Boyi Liu; Yan Tai; Boyu Liu; Ana I Caceres; Chengyu Yin; Sven-Eric Jordt. "Transcriptome profiling reveals Th2 bias and identifies endogenous itch mediators in poison ivy contact dermatitis." JCI insight (2019).

Epitope: Urushiol
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 6-8 weeks
Reference: Dhanapal Govindaraj; Swati Sharma; Naresh Singh; Naveen Arora. "T cell epitopes of Per a 10 modulate local-systemic immune responses and airway inflammation by augmenting Th1 and T regulatory cell functions in murine model." Immunobiology (2019).

Epitope: T-P8
Chemical type: Peptide from protein
Sequence: YLVLASLIACS
Position: 4-14
Source molecule (GenBank): AAX33734.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: T-P8
Chemical type: Peptide from protein
Sequence: YLVLASLIACS
Position: 4-14
Source molecule (GenBank): AAX33734.1
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: T-P9
Chemical type: Peptide from protein
Sequence: LVVNGQ
Position: 214-219
Source molecule (GenBank): AAX33734.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: T-P9
Chemical type: Peptide from protein
Sequence: LVVNGQ
Position: 214-219
Source molecule (GenBank): AAX33734.1
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: T-P10
Chemical type: Peptide from protein
Sequence: SNVASLKGFIT
Position: 240-250
Source molecule (GenBank): AAX33734.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: T-P10
Chemical type: Peptide from protein
Sequence: SNVASLKGFIT
Position: 240-250
Source molecule (GenBank): AAX33734.1
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Jie Li; Lin Yang; Jingru Wang; Yongshi Yang; Yuying Wu; Qing Jiang; Yaqi Yang; Dongxia Ma; Rui Zhang; Nan Huang; Wenjing Li; Guanghui Liu; Rongfei Zhu. "B Cell Mimotope Immunotherapy Alleviates Allergic Responses in a Mouse Model." Journal of immunology (Baltimore, Md. : 1950) (2019).

Epitope: Alternaria mimotope 1
Chemical type: Peptide, no natural source
Sequence: MISTSRK
Assay category: BCell
Result: Positive-Low

Epitope: Alternaria mimotope 1
Chemical type: Peptide, no natural source
Sequence: MISTSRK
Assay category: BCell
Result: Positive

Epitope: Alternaria mimotope 1
Chemical type: Peptide, no natural source
Sequence: MISTSRK
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Alternaria mimotope 1
Chemical type: Peptide, no natural source
Sequence: MISTSRK
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Alternaria mimotope 1
Chemical type: Peptide, no natural source
Sequence: MISTSRK
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Alternaria mimotope 2
Chemical type: Peptide, no natural source
Sequence: QKRNTIT
Assay category: BCell
Result: Positive

Epitope: Alternaria mimotope 2
Chemical type: Peptide, no natural source
Sequence: QKRNTIT
Assay category: BCell
Result: Positive-Low

Epitope: Alternaria mimotope 2
Chemical type: Peptide, no natural source
Sequence: QKRNTIT
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Alternaria mimotope 2
Chemical type: Peptide, no natural source
Sequence: QKRNTIT
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: Alternaria mimotope 2
Chemical type: Peptide, no natural source
Sequence: QKRNTIT
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Braxton L Jamison; Tobias Neef; Andrew Goodspeed; Brenda Bradley; Rocky L Baker; Stephen D Miller; Kathryn Haskins. "Nanoparticles Containing an Insulin-ChgA Hybrid Peptide Protect from Transfer of Autoimmune Diabetes by Shifting the Balance between Effector T Cells and Regulatory T Cells." Journal of immunology (Baltimore, Md. : 1950) (2019).

Epitope: 2.5HIP
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Engineered

Epitope: 2.5HIP
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: pancreas
Culture conditions: Engineered

Epitope: 2.5HIP
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: pancreas
Culture conditions: Engineered
Reference: Jesica A Swanstrom; Usha K Nivarthi; Bhumi Patel; Matthew J Delacruz; Boyd Yount; Douglas G Widman; Anna P Durbin; Stephen S Whitehead; Aravinda M De Silva; Ralph S Baric. "Beyond Neutralizing Antibody Levels: The Epitope Specificity of Antibodies Induced by National Institutes of Health Monovalent Dengue Virus Vaccines." The Journal of infectious diseases (2019).

Epitope: mAb 14C10 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: T51, N52, Q131, Y132, L135, K136, G159, T160, T165, P166, Q167, E172, I173, L175, G274, T275, L308, K310, E384, K385
Source molecule (GenBank): AQN27303.2
Assay category: BCell
Result: Positive
Reference: Mohammad Amin Behzadi; Kathryn R Stein; Maria Carolina Bermúdez-González; Viviana Simon; Raffael Nachbagauer; Domenico Tortorella. "An Influenza Virus Hemagglutinin-Based Vaccine Platform Enables the Generation of Epitope Specific Human Cytomegalovirus Antibodies." Vaccines (2019).

Epitope: gH-7AA
Chemical type: Peptide from protein
Sequence: EIFIVET
Position: 487-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive

Epitope: gH-7AA
Chemical type: Peptide from protein
Sequence: EIFIVET
Position: 487-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive

Epitope: gH-7AA
Chemical type: Peptide from protein
Sequence: EIFIVET
Position: 487-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive

Epitope: gH-7AA
Chemical type: Peptide from protein
Sequence: EIFIVET
Position: 487-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: gH-7AA
Chemical type: Peptide from protein
Sequence: EIFIVET
Position: 487-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: gH-10AA
Chemical type: Peptide from protein
Sequence: ERREIFIVET
Position: 484-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: gH-10AA
Chemical type: Peptide from protein
Sequence: ERREIFIVET
Position: 484-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive

Epitope: gH-10AA
Chemical type: Peptide from protein
Sequence: ERREIFIVET
Position: 484-493
Source molecule (GenBank): CAA00301.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Pharaoh Fellow Mwale; Chi-Hsin Lee; Sy-Jye Leu; Yu-Ching Lee; Hsueh-Hsia Wu; Liang-Tzung Lin; Tony Eight Lin; Yun-Ju Huang; Yi-Yuan Yang. "Antigenic epitopes on the outer membrane protein A of Escherichia coli identified with single-chain variable fragment (scFv) antibodies." Applied microbiology and biotechnology (2019).

Epitope: OmpA 161-167
Chemical type: Peptide from protein
Sequence: EYQWTNN
Position: 161-167
Source molecule (GenBank): AAF37887.1
Assay category: BCell
Result: Positive
Host: F

Epitope: OmpA 161-167
Chemical type: Peptide from protein
Sequence: EYQWTNN
Position: 161-167
Source molecule (GenBank): AAF37887.1
Assay category: BCell
Result: Positive
Host: F

Epitope: OmpA 161-167
Chemical type: Peptide from protein
Sequence: EYQWTNN
Position: 161-167
Source molecule (GenBank): AAF37887.1
Assay category: BCell
Result: Positive
Host: F

Epitope: OmpA 161-167
Chemical type: Peptide from protein
Sequence: EYQWTNN
Position: 161-167
Source molecule (GenBank): AAF37887.1
Assay category: BCell
Result: Positive
Host: F
Reference: Krisztina Hitri; Michelle M Kuttel; Gianluigi De Benedetto; Kay Lockyer; Fang Gao; Peter Hansal; Timothy R Rudd; Emma Beamish; Sjoerd Rijpkema; Neil Ravenscroft; Barbara Bolgiano. "O-acetylation of typhoid capsular polysaccharide confers polysaccharide rigidity and immunodominance by masking additional epitopes." Vaccine (2019).

Epitope: S Typhi Vi polysaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: S Typhi Vi polysaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: S Typhi Vi polysaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: C freundii Vi polysaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: C freundii Vi polysaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: C freundii Vi polysaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Reference: Zhenyi Wang; Liansheng Cheng; Gongrui Guo; Baoyun Cheng; Siyi Hu; Hongmin Zhang; Zhongliang Zhu; Liwen Niu. "Structural insight into a matured humanized monoclonal antibody HuA21 against HER2-overexpressing cancer cells." Acta crystallographica. Section D, Structural biology (2019).

Epitope: Epitope of HuA21 on HER2
Chemical type: Discontinuous protein residues
Discontinuous residues: R157, P159, Y163, D165, T166, T186, N187, R188, S189, R190, A191, C192, H193, P194, C195, P197, S202, E207
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.918

Epitope: Epitope of HuA21 on HER2
Chemical type: Discontinuous protein residues
Discontinuous residues: R157, P159, Y163, D165, T166, T186, N187, R188, S189, R190, A191, C192, H193, P194, C195, P197, S202, E207
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive

Epitope: Epitope of HuA21 on HER2
Chemical type: Discontinuous protein residues
Discontinuous residues: R157, P159, Y163, D165, T166, T186, N187, R188, S189, R190, A191, C192, H193, P194, C195, P197, S202, E207
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive
Reference: Mika K Kaneko; Shinji Yamada; Shunsuke Itai; Yao-Wen Chang; Takuro Nakamura; Miyuki Yanaka; Hiroyuki Harada; Hiroyoshi Suzuki; Yukinari Kato. "Elucidation of the TMab-6 Monoclonal Antibody Epitope Against Telomerase Reverse Transcriptase." Monoclonal antibodies in immunodiagnosis and immunotherapy (2019).

Epitope: TERT 308-318
Chemical type: Peptide from protein
Sequence: PSTSRPPRPWD
Position: 308-318
Source molecule (GenBank): O14746.1
Assay category: BCell
Result: Positive

Epitope: TERT 308-318
Chemical type: Peptide from protein
Sequence: PSTSRPPRPWD
Position: 308-318
Source molecule (GenBank): O14746.1
Assay category: BCell
Result: Positive

Epitope: TERT 308-318
Chemical type: Peptide from protein
Sequence: PSTSRPPRPWD
Position: 308-318
Source molecule (GenBank): O14746.1
Assay category: BCell
Result: Positive