Reference: Zemin Zhou; Eduardo Reyes-Vargas; Hernando Escobar; Kuan Y Chang; Adam P Barker; Alan L Rockwood; Julio C Delgado; Xiao He; Peter E Jensen. "Peptidomic analysis of type 1 diabetes associated HLA-DQ molecules and the impact of HLA-DM on peptide repertoire editing." European journal of immunology (2017).

Epitope: ABP230
Chemical type: Peptide from protein
Sequence: EEEEVAEVEEEEADDD
Position: 230-245
Source molecule (GenBank): P05067.3
Assay category: MhcLigandElution
Result: Positive

Epitope: ABP230
Chemical type: Peptide from protein
Sequence: EEEEVAEVEEEEADDD
Position: 230-245
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 500.0

Epitope: ABP634
Chemical type: Peptide from protein
Sequence: ENEVEPVDARPAADR
Position: 634-648
Source molecule (GenBank): P05067.3
Assay category: MhcLigandElution
Result: Positive

Epitope: ABP634
Chemical type: Peptide from protein
Sequence: ENEVEPVDARPAADR
Position: 634-648
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3300.0

Epitope: ABP634
Chemical type: Peptide from protein
Sequence: ENEVEPVDARPAADR
Position: 634-648
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 327.2

Epitope: CBC114
Chemical type: Peptide from protein
Sequence: GVVRGASIPFQFRP
Position: 114-127
Source molecule (GenBank): Q13137.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CBC114
Chemical type: Peptide from protein
Sequence: GVVRGASIPFQFRP
Position: 114-127
Source molecule (GenBank): Q13137.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3852.0

Epitope: CBC114
Chemical type: Peptide from protein
Sequence: GVVRGASIPFQFRP
Position: 114-127
Source molecule (GenBank): Q13137.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 174.0

Epitope: GRP198
Chemical type: Peptide from protein
Sequence: IINEPTAAAIAYG
Position: 198-210
Source molecule (GenBank): P11021.2
Assay category: MhcLigandElution
Result: Positive

Epitope: GRP198
Chemical type: Peptide from protein
Sequence: IINEPTAAAIAYG
Position: 198-210
Source molecule (GenBank): P11021.2
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3852.0

Epitope: GRP198
Chemical type: Peptide from protein
Sequence: IINEPTAAAIAYG
Position: 198-210
Source molecule (GenBank): P11021.2
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 94.7

Epitope: SCM57
Chemical type: Peptide from protein
Sequence: SSQPAVLQPSVE
Position: 57-68
Source molecule (GenBank): O15127.2
Assay category: MhcLigandElution
Result: Positive

Epitope: SCM57
Chemical type: Peptide from protein
Sequence: SSQPAVLQPSVE
Position: 57-68
Source molecule (GenBank): O15127.2
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 100.0

Epitope: PRP348
Chemical type: Peptide from protein
Sequence: APSIGFVSVRQGALS
Position: 348-362
Source molecule (GenBank): O14917.2
Assay category: MhcLigandElution
Result: Positive

Epitope: PRP348
Chemical type: Peptide from protein
Sequence: APSIGFVSVRQGALS
Position: 348-362
Source molecule (GenBank): O14917.2
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 4812.0

Epitope: PRP348
Chemical type: Peptide from protein
Sequence: APSIGFVSVRQGALS
Position: 348-362
Source molecule (GenBank): O14917.2
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 158.7

Epitope: TPP425
Chemical type: Peptide from protein
Sequence: EVQQTAARIAGALG
Position: 426-439
Source molecule (GenBank): Q9NX61.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TPP425
Chemical type: Peptide from protein
Sequence: EVQQTAARIAGALG
Position: 426-439
Source molecule (GenBank): Q9NX61.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3726.0

Epitope: TPP425
Chemical type: Peptide from protein
Sequence: EVQQTAARIAGALG
Position: 426-439
Source molecule (GenBank): Q9NX61.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 105.9

Epitope: NEP494
Chemical type: Peptide from protein
Sequence: TPKTVKGVIIQGARGGD
Position: 494-510
Source molecule (GenBank): O60462.2
Assay category: MhcLigandElution
Result: Positive

Epitope: NEP494
Chemical type: Peptide from protein
Sequence: TPKTVKGVIIQGARGGD
Position: 494-510
Source molecule (GenBank): O60462.2
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 50.0

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcLigandElution
Result: Positive

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Negative

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Negative

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 426.0

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 462.0

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3498.0

Epitope: CLIP1
Chemical type: Peptide from protein
Sequence: LPKPPKPVSKMRMATPLLMQA
Position: 97-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 7649.7

Epitope: CLIP2
Chemical type: Peptide from protein
Sequence: MATPLLMQALPM
Position: 109-120
Source molecule (GenBank): P04233.3
Assay category: MhcLigandElution
Result: Positive

Epitope: CLIP2
Chemical type: Peptide from protein
Sequence: MATPLLMQALPM
Position: 109-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3000.0

Epitope: ABP625
Chemical type: Peptide from protein
Sequence: GADSVPANTENEVEPV
Position: 625-640
Source molecule (GenBank): P05067.3
Assay category: MhcLigandElution
Result: Positive

Epitope: ABP625
Chemical type: Peptide from protein
Sequence: GADSVPANTENEVEPV
Position: 625-640
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Negative

Epitope: ABP625
Chemical type: Peptide from protein
Sequence: GADSVPANTENEVEPV
Position: 625-640
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 8250.0

Epitope: ABP625
Chemical type: Peptide from protein
Sequence: GADSVPANTENEVEPV
Position: 625-640
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 7218.0

Epitope: ABP625
Chemical type: Peptide from protein
Sequence: GADSVPANTENEVEPV
Position: 625-640
Source molecule (GenBank): P05067.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 8026.7

Epitope: APP628
Chemical type: Peptide from protein
Sequence: VGEQDGGLIGAEEKVIN
Position: 628-644
Source molecule (GenBank): Q06481.2
Assay category: MhcLigandElution
Result: Positive

Epitope: APP628
Chemical type: Peptide from protein
Sequence: VGEQDGGLIGAEEKVIN
Position: 628-644
Source molecule (GenBank): Q06481.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 9000.0

Epitope: EGF324
Chemical type: Peptide from protein
Sequence: LARCPEAGLAAQVISPLLTPKA
Position: 325-346
Source molecule (GenBank): Q8TE67.2
Assay category: MhcLigandElution
Result: Positive

Epitope: EGF324
Chemical type: Peptide from protein
Sequence: LARCPEAGLAAQVISPLLTPKA
Position: 325-346
Source molecule (GenBank): Q8TE67.2
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3000.0

Epitope: LEP147
Chemical type: Peptide from protein
Sequence: DHGSTGILVFPNEDL
Position: 147-161
Source molecule (GenBank): Q99538.1
Assay category: MhcLigandElution
Result: Positive

Epitope: LEP147
Chemical type: Peptide from protein
Sequence: DHGSTGILVFPNEDL
Position: 147-161
Source molecule (GenBank): Q99538.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 3852.0

Epitope: LEP147
Chemical type: Peptide from protein
Sequence: DHGSTGILVFPNEDL
Position: 147-161
Source molecule (GenBank): Q99538.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 321.0

Epitope: CLIP1*
Chemical type: Peptide from protein
Sequence: KMRMATPLLMQA
Position: 106-117
Source molecule (GenBank): P04233.3
Assay category: MhcLigandElution
Result: Positive

Epitope: CLIP1*
Chemical type: Peptide from protein
Sequence: KMRMATPLLMQA
Position: 106-117
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 18000.0