Reference: Walther Brochier; Sylvain Nguyen; Valérie Cesson; Orian Bricard; Nicolas van Baren; Gérald Hames; Nicolas Dauguet; Hélène Dano; Bertrand Tombal; Sonia-Cristina Rodrigues-Dias; Audrey Masnada; Raphael Genolet; Alexandre Harari; Beat Roth; Ilaria Lucca; Denise Nardelli-Haefliger; Pierre G Coulie; Laurent Derré. "Detection of spontaneous anti-neoepitope T-cell responses in non-metastatic bladder cancer patients." Frontiers in immunology (2025).

Epitope: TIPRL P229L
Chemical type: Neo-epitope
Sequence: SLMHVPLSL
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: TIPRL P229L
Chemical type: Neo-epitope
Sequence: SLMHVPLSL
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: IQGAP3 Q976E
Chemical type: Neo-epitope
Sequence: YLAKLIFEM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KNTC1 D607H
Chemical type: Neo-epitope
Sequence: KLCPWFKNH
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: KNTC1 D607H
Chemical type: Neo-epitope
Sequence: KLCPWFKNH
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: RXRA S427F
Chemical type: Neo-epitope
Sequence: LPALRFIGL
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: RXRA S427F
Chemical type: Neo-epitope
Sequence: LPALRFIGL
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: RPLP0 R214C
Chemical type: Neo-epitope
Sequence: TEETLHSCF
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: RPLP0 R214C
Chemical type: Neo-epitope
Sequence: TEETLHSCF
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: RPLP0 R214C
Chemical type: Neo-epitope
Sequence: TEETLHSCF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: XRN1 S539L
Chemical type: Neo-epitope
Sequence: NEDLPIIEYY
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: XRN1 S539L
Chemical type: Neo-epitope
Sequence: NEDLPIIEYY
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: SMG9 T361I
Chemical type: Neo-epitope
Sequence: GSDEGIEYY
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ITGA9 E768K
Chemical type: Neo-epitope
Sequence: KVDTSITGI
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: CLUH S342W
Chemical type: Neo-epitope
Sequence: AEDAYTWRLGY
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: CLUH S342W
Chemical type: Neo-epitope
Sequence: AEDAYTWRLGY
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: CLUH S342W
Chemical type: Neo-epitope
Sequence: AEDAYTWRLGY
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LGALS9 F164L
Chemical type: Neo-epitope
Sequence: VPLSQPVCF
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: LGALS9 F164L
Chemical type: Neo-epitope
Sequence: VPLSQPVCF
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: bladder
Culture conditions: Non-antigen specific activation

Epitope: ARF1 I89M
Chemical type: Neo-epitope
Sequence: FQNTQGLMF
Assay category: TCell
Result: Positive
Host: M 84 years
Cell type: Jurkat E6.1 cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: SRPRA H320Y
Chemical type: Neo-epitope
Sequence: KMRDYLIAK
Assay category: TCell
Result: Positive
Host: M 84 years
Cell type: Jurkat E6.1 cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: CDK12 K1045N
Chemical type: Neo-epitope
Sequence: DCHELWSNKR
Assay category: TCell
Result: Positive
Host: M 84 years
Cell type: Jurkat E6.1 cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: HOMEZ S287F
Chemical type: Neo-epitope
Sequence: SSSFTSSSF
Assay category: TCell
Result: Positive
Host: M 84 years
Cell type: Jurkat E6.1 cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: HIST3H2BB S39F
Chemical type: Neo-epitope
Sequence: ESYFIYVYK
Assay category: TCell
Result: Positive
Host: M 84 years
Cell type: Jurkat E6.1 cell (T cell)
Tissue: blood
Culture conditions: Engineered