Reference: Monica M McNeal; Mitali Basu; Judy A Bean; John D Clements; Anthony H-C Choi; Richard L Ward. "Identification of an immunodominant CD4+ T cell epitope in the VP6 protein of rotavirus following intranasal immunization of BALB/c mice." Virology (2007).

Epitope: VP6 289-302
Chemical type: Peptide from protein
Sequence: RLSFQLMRPPNMTP
Position: 289-302
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: VP6 289-302
Chemical type: Peptide from protein
Sequence: RLSFQLMRPPNMTP
Position: 289-302
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 1: VP6 197-221
Chemical type: Peptide from protein
Sequence: CAINAPANIQQFEHIVQLRRVLTTA
Position: 197-221
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 1: VP6 197-221
Chemical type: Peptide from protein
Sequence: CAINAPANIQQFEHIVQLRRVLTTA
Position: 197-221
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 3: VP6 232–261
Chemical type: Peptide from protein
Sequence: FSFPRVINSADGATTWYFNPVILRPNNVEV
Position: 232-261
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks

Epitope: Peptide 3: VP6 232–261
Chemical type: Peptide from protein
Sequence: FSFPRVINSADGATTWYFNPVILRPNNVEV
Position: 232-261
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 3: VP6 232–261
Chemical type: Peptide from protein
Sequence: FSFPRVINSADGATTWYFNPVILRPNNVEV
Position: 232-261
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 4: VP6 249–277
Chemical type: Peptide from protein
Sequence: FNPVILRPNNVEVEFLLNGQVINTYQARF
Position: 249-277
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 4: VP6 249–277
Chemical type: Peptide from protein
Sequence: FNPVILRPNNVEVEFLLNGQVINTYQARF
Position: 249-277
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 5: VP6 266–295
Chemical type: Peptide from protein
Sequence: NGQVINTYQARFGTIVARNFDTIRLSFQLM
Position: 266-295
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 5: VP6 266–295
Chemical type: Peptide from protein
Sequence: NGQVINTYQARFGTIVARNFDTIRLSFQLM
Position: 266-295
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 6: VP6 283–307
Chemical type: Peptide from protein
Sequence: RNFDTIRLSFQLMRPPNMTPAVTAL
Position: 283-307
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 6: VP6 283–307
Chemical type: Peptide from protein
Sequence: RNFDTIRLSFQLMRPPNMTPAVTAL
Position: 283-307
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 7: VP6 300–329
Chemical type: Peptide from protein
Sequence: MTPAVTALFPNAQPFEHHATVGLTLRIDSA
Position: 300-329
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 7: VP6 300–329
Chemical type: Peptide from protein
Sequence: MTPAVTALFPNAQPFEHHATVGLTLRIDSA
Position: 300-329
Source molecule (GenBank): AAC57838.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 8: VP6 317–346
Chemical type: Peptide from protein
Sequence: HATVGLTLRIDSAICESVLADASETMLANV
Position: 317-346
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 8: VP6 317–346
Chemical type: Peptide from protein
Sequence: HATVGLTLRIDSAICESVLADASETMLANV
Position: 317-346
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 9: VP6 334–355
Chemical type: Peptide from protein
Sequence: VLADASETMLANVTSVRQEYAI
Position: 334-355
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 9: VP6 334–355
Chemical type: Peptide from protein
Sequence: VLADASETMLANVTSVRQEYAI
Position: 334-355
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 10: VP6 351–380
Chemical type: Peptide from protein
Sequence: QEYAIPVGPVFPPGMNWTDLITNYSPSRED
Position: 351-380
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 10: VP6 351–380
Chemical type: Peptide from protein
Sequence: QEYAIPVGPVFPPGMNWTDLITNYSPSRED
Position: 351-380
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 11: VP6 368-397
Chemical type: Peptide from protein
Sequence: TDLITNYSPSREDNLQRVFTVASIRSMLVK
Position: 368-397
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 11: VP6 368-397
Chemical type: Peptide from protein
Sequence: TDLITNYSPSREDNLQRVFTVASIRSMLVK
Position: 368-397
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide A: VP6 227-241
Chemical type: Peptide from protein
Sequence: PDAERFSFPRVINSA
Position: 227-241
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide A: VP6 227-241
Chemical type: Peptide from protein
Sequence: PDAERFSFPRVINSA
Position: 227-241
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide B: VP6 230-244
Chemical type: Peptide from protein
Sequence: ERFSFPRVINSADGA
Position: 230-244
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide B: VP6 230-244
Chemical type: Peptide from protein
Sequence: ERFSFPRVINSADGA
Position: 230-244
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide C: VP6 233-247
Chemical type: Peptide from protein
Sequence: SFPRVINSADGATTW
Position: 233-247
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide C: VP6 233-247
Chemical type: Peptide from protein
Sequence: SFPRVINSADGATTW
Position: 233-247
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide D: VP6 236-250
Chemical type: Peptide from protein
Sequence: RVINSADGATTWYFN
Position: 236-250
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide D: VP6 236-250
Chemical type: Peptide from protein
Sequence: RVINSADGATTWYFN
Position: 236-250
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide E: VP6 242-256
Chemical type: Peptide from protein
Sequence: DGATTWYFNPVILRP
Position: 242-256
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide E: VP6 242-256
Chemical type: Peptide from protein
Sequence: DGATTWYFNPVILRP
Position: 242-256
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide F: VP6 245-259
Chemical type: Peptide from protein
Sequence: TTWYFNPVILRPNNV
Position: 245-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide F: VP6 245-259
Chemical type: Peptide from protein
Sequence: TTWYFNPVILRPNNV
Position: 245-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide G: VP6 248-262
Chemical type: Peptide from protein
Sequence: YFNPVILRPNNVEVE
Position: 248-262
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide G: VP6 248-262
Chemical type: Peptide from protein
Sequence: YFNPVILRPNNVEVE
Position: 248-262
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 18 mer: VP6 242-259
Chemical type: Peptide from protein
Sequence: DGATTWYFNPVILRPNNV
Position: 242-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 18 mer: VP6 242-259
Chemical type: Peptide from protein
Sequence: DGATTWYFNPVILRPNNV
Position: 242-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 18 mer: VP6 242-259
Chemical type: Peptide from protein
Sequence: DGATTWYFNPVILRPNNV
Position: 242-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks

Epitope: 20 mer: VP6 240-259
Chemical type: Peptide from protein
Sequence: SADGATTWYFNPVILRPNNV
Position: 240-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 20 mer: VP6 240-259
Chemical type: Peptide from protein
Sequence: SADGATTWYFNPVILRPNNV
Position: 240-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 20 mer: VP6 240-259
Chemical type: Peptide from protein
Sequence: SADGATTWYFNPVILRPNNV
Position: 240-259
Source molecule (GenBank): AAX51238.1
Assay category: TCell
Result: Positive
Host: F 6 weeks