Reference: Sara Yousef; Raquel Planas; Karima Chakroun; Sabine Hoffmeister-Ullerich; Thomas M C Binder; Thomas H Eiermann; Roland Martin; Mireia Sospedra. "TCR bias and HLA cross-restriction are strategies of human brain-infiltrating JC virus-specific CD4+ T cells during viral infection." Journal of immunology (Baltimore, Md. : 1950) (2012).

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>54</sub>
Chemical type: Peptide from protein
Sequence: HLRGFSKSISISDTF
Position: 54-68
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>91</sub>
Chemical type: Peptide from protein
Sequence: LNEDLTCGNILMWEA
Position: 91-105
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>143</sub>
Chemical type: Peptide from protein
Sequence: HFFSVGGEALELQGV
Position: 42-56
Source molecule (GenBank): AAG23645.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>229</sub>
Chemical type: Peptide from protein
Sequence: ITNTATTVLLDEFGV
Position: 229-243
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>229</sub>
Chemical type: Peptide from protein
Sequence: ITNTATTVLLDEFGV
Position: 229-243
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>229</sub>
Chemical type: Peptide from protein
Sequence: ITNTATTVLLDEFGV
Position: 229-243
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>335</sub>
Chemical type: Peptide from protein
Sequence: GDPDMMRYVDKYGQL
Position: 335-349
Source molecule (GenBank): AEC15783.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>74</sub>-3
Chemical type: Peptide from protein
Sequence: NKDMLPCYSVARIPL
Position: 74-88
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>74</sub>-3
Chemical type: Peptide from protein
Sequence: NKDMLPCYSVARIPL
Position: 74-88
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>74</sub>-3
Chemical type: Peptide from protein
Sequence: NKDMLPCYSVARIPL
Position: 74-88
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>74</sub>-3
Chemical type: Peptide from protein
Sequence: NKDMLPCYSVARIPL
Position: 74-88
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>74</sub>-3
Chemical type: Peptide from protein
Sequence: NKDMLPCYSVARIPL
Position: 74-88
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: VP1<sub>74</sub>-3
Chemical type: Peptide from protein
Sequence: NKDMLPCYSVARIPL
Position: 74-88
Source molecule (GenBank): AAL37677.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 1
Chemical type: Peptide, no natural source
Sequence: ADSITEVECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 2
Chemical type: Peptide, no natural source
Sequence: VASITEVECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 3
Chemical type: Peptide, no natural source
Sequence: VDAITEVECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 4
Chemical type: Peptide, no natural source
Sequence: VDSATEVECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 5
Chemical type: Peptide, no natural source
Sequence: VDSIAEVECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 6
Chemical type: Peptide, no natural source
Sequence: VDSITAVECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 7
Chemical type: Peptide, no natural source
Sequence: VDSITEAECFLTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 9
Chemical type: Peptide, no natural source
Sequence: VDSITEVECALTPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 10
Chemical type: Peptide, no natural source
Sequence: VDSITEVECFATPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 11
Chemical type: Peptide, no natural source
Sequence: VDSITEVECFLAPEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 12
Chemical type: Peptide, no natural source
Sequence: VDSITEVECFLTAEM
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone

Epitope: Peptide 14
Chemical type: Peptide, no natural source
Sequence: VDSITEVECFLTPEA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Cell Line / Clone