Reference: John Sidney; Jennifer Schloss; Carrie Moore; Mikaela Lindvall; Amanda Wriston; Donald F Hunt; Jeffrey Shabanowitz; Teresa P DiLorenzo; Alessandro Sette. "Characterization of the peptide binding specificity of the HLA class I alleles B*38:01 and B*39:06." Immunogenetics (2016).

Epitope: Variola virus RNA-helicase analog
Chemical type: Peptide, no natural source
Sequence: YHIPGDTLF
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 1.4

Epitope: Variola virus C2L
Chemical type: Peptide from protein
Sequence: RHDITGFIL
Position: 357-365
Source molecule (GenBank): AAA69433.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 6.4

Epitope: HIV Vif
Chemical type: Peptide from protein
Sequence: WHLGQGVSI
Position: 79-87
Source molecule (GenBank): BAA93915.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 10.0

Epitope: Variola virus RNA-helicase
Chemical type: Peptide from protein
Sequence: IHIPGDTLF
Position: 128-136
Source molecule (GenBank): 1902341A
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 11.0

Epitope: SIV Pol
Chemical type: Peptide from protein
Sequence: FRQYTAFTL
Position: 332-340
Source molecule (GenBank): AAU14024.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 17.0

Epitope: Lake Victoria marburgvirus L
Chemical type: Peptide from protein
Sequence: SHYSHNPKL
Position: 32-40
Source molecule (GenBank): P35262.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 25.0

Epitope: SIV Gag
Chemical type: Peptide from protein
Sequence: DRFGLAESL
Position: 42-50
Source molecule (GenBank): AAA47632.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 30.0

Epitope: HIV env
Chemical type: Peptide from protein
Sequence: MHEDIISLW
Position: 75-83
Source molecule (GenBank): AAC55693.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 53.0

Epitope: SIV Gag
Chemical type: Peptide from protein
Sequence: DHQAAMQII
Position: 195-203
Source molecule (GenBank): AAA47632.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 125.0

Epitope: SIV Env
Chemical type: Peptide from protein
Sequence: THIQQDPAL
Position: 735-743
Source molecule (GenBank): AAA47637.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 148.0

Epitope: HIV Env analog
Chemical type: Peptide, no natural source
Sequence: KMQEDYALF
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 539.0

Epitope: SIV Pol
Chemical type: Peptide from protein
Sequence: THTNGVRLL
Position: 567-575
Source molecule (GenBank): AAA47633.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 617.0

Epitope: SIV env
Chemical type: Peptide from protein
Sequence: WLFSNCRTL
Position: 781-789
Source molecule (GenBank): BAA00871.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 993.0

Epitope: HIV Gag
Chemical type: Peptide from protein
Sequence: GHQAAMQML
Position: 193-201
Source molecule (GenBank): BAA00992.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1016.0

Epitope: HIV env
Chemical type: Peptide from protein
Sequence: KRHKEFALF
Position: 173-181
Source molecule (GenBank): AAF31326.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1102.0

Epitope: SIV Vpx
Chemical type: Peptide from protein
Sequence: NHLPRELIF
Position: 38-46
Source molecule (GenBank): AAA72399.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1123.0

Epitope: SIV Vif
Chemical type: Peptide from protein
Sequence: VPSLQYLAL
Position: 145-153
Source molecule (GenBank): AAA47634.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1526.0

Epitope: SIV pol
Chemical type: Peptide from protein
Sequence: IHGQANSDL
Position: 817-825
Source molecule (GenBank): AAA47633.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 2361.0

Epitope: SIV env
Chemical type: Peptide from protein
Sequence: NETWYSADL
Position: 184-192
Source molecule (GenBank): AAU94507.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 3924.0

Epitope: Variola virus hemagglutinin
Chemical type: Peptide from protein
Sequence: YKEPNSIIL
Position: 51-59
Source molecule (GenBank): AAN47064.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 4726.0

Epitope: HIV env
Chemical type: Peptide from protein
Sequence: KMQKEHALF
Position: 44-52
Source molecule (GenBank): AAN39958.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 12136.0

Epitope: HIV env
Chemical type: Peptide from protein
Sequence: KTQKEYALF
Position: 60-68
Source molecule (GenBank): AAC56788.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 40585.0

Epitope: SPCS3 analog
Chemical type: Peptide, no natural source
Sequence: SMFAFSLSV
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 541.0

Epitope: MAGE3 analog
Chemical type: Peptide, no natural source
Sequence: YVFPVIFSR
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 541.0

Epitope: H. sapiens proteasome
Chemical type: Peptide from protein
Sequence: FRYQGHVGA
Position: 127-135
Source molecule (GenBank): P40306.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 1.7

Epitope: NACHT (323-331)
Chemical type: Peptide from protein
Sequence: NRVMLPKAA
Position: 323-331
Source molecule (GenBank): Q9NX02.1
Assay category: MhcLigandElution
Result: Positive

Epitope: NACHT (323-331)
Chemical type: Peptide from protein
Sequence: NRVMLPKAA
Position: 323-331
Source molecule (GenBank): Q9NX02.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 2.7

Epitope: ATP-dependent RNA helicase DDX24 (411-419)
Chemical type: Peptide from protein
Sequence: ARFTGIKTA
Position: 411-419
Source molecule (GenBank): Q9GZR7.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ATP-dependent RNA helicase DDX24 (411-419)
Chemical type: Peptide from protein
Sequence: ARFTGIKTA
Position: 411-419
Source molecule (GenBank): Q9GZR7.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 6.0

Epitope: serine/threonine-protein kinase 4 (276-284)
Chemical type: Peptide from protein
Sequence: LQHPFVRSA
Position: 276-284
Source molecule (GenBank): NP_006273.1
Assay category: MhcLigandElution
Result: Positive

Epitope: serine/threonine-protein kinase 4 (276-284)
Chemical type: Peptide from protein
Sequence: LQHPFVRSA
Position: 276-284
Source molecule (GenBank): NP_006273.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 7.7

Epitope: Zinc finger protein 800 (546-554)
Chemical type: Peptide from protein
Sequence: SRYLGKITA
Position: 546-554
Source molecule (GenBank): Q2TB10.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Zinc finger protein 800 (546-554)
Chemical type: Peptide from protein
Sequence: SRYLGKITA
Position: 546-554
Source molecule (GenBank): Q2TB10.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 8.1

Epitope: pre-mRNA-splicing factor SYF2 isoform 2 (181-189)
Chemical type: Peptide from protein
Sequence: ERFYGKYTA
Position: 181-189
Source molecule (GenBank): NP_997053.1
Assay category: MhcLigandElution
Result: Positive

Epitope: pre-mRNA-splicing factor SYF2 isoform 2 (181-189)
Chemical type: Peptide from protein
Sequence: ERFYGKYTA
Position: 181-189
Source molecule (GenBank): NP_997053.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 9.2

Epitope: cytokine receptor-like factor 3 (32-40)
Chemical type: Peptide from protein
Sequence: HRLEGLREA
Position: 32-40
Source molecule (GenBank): AAH23567.2
Assay category: MhcLigandElution
Result: Positive

Epitope: cytokine receptor-like factor 3 (32-40)
Chemical type: Peptide from protein
Sequence: HRLEGLREA
Position: 32-40
Source molecule (GenBank): AAH23567.2
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 9.6

Epitope: Claspin (293-301)
Chemical type: Peptide from protein
Sequence: TQRLIRESA
Position: 293-301
Source molecule (GenBank): Q9HAW4.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Claspin (293-301)
Chemical type: Peptide from protein
Sequence: TQRLIRESA
Position: 293-301
Source molecule (GenBank): Q9HAW4.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 11.0

Epitope: NADH dehydrogenase
Chemical type: Peptide from protein
Sequence: THNYGIGAA
Position: 105-113
Source molecule (GenBank): NP_783313.1
Assay category: MhcLigandElution
Result: Positive

Epitope: NADH dehydrogenase
Chemical type: Peptide from protein
Sequence: THNYGIGAA
Position: 105-113
Source molecule (GenBank): NP_783313.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 15.0

Epitope: phosphoinositide-3-kinase
Chemical type: Peptide from protein
Sequence: ERMKLVVQA
Position: 302-310
Source molecule (GenBank): CAI15702.1
Assay category: MhcLigandElution
Result: Positive

Epitope: phosphoinositide-3-kinase
Chemical type: Peptide from protein
Sequence: ERMKLVVQA
Position: 302-310
Source molecule (GenBank): CAI15702.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 15.0

Epitope: spectrin beta chain, brain 1 isoform 1 (493-501)
Chemical type: Peptide from protein
Sequence: YHDIKRITA
Position: 493-501
Source molecule (GenBank): NP_003119.2
Assay category: MhcLigandElution
Result: Positive

Epitope: spectrin beta chain, brain 1 isoform 1 (493-501)
Chemical type: Peptide from protein
Sequence: YHDIKRITA
Position: 493-501
Source molecule (GenBank): NP_003119.2
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 17.0

Epitope: Serine-threonine kinase receptor-associate
Chemical type: Peptide from protein
Sequence: GRSIAFHSA
Position: 203-211
Source molecule (GenBank): Q9Y3F4.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Serine-threonine kinase receptor-associate
Chemical type: Peptide from protein
Sequence: GRSIAFHSA
Position: 203-211
Source molecule (GenBank): Q9Y3F4.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 40.0

Epitope: E3 ubiquitin-protein ligase RNF181 (47-55)
Chemical type: Peptide from protein
Sequence: DHHLPPPAA
Position: 47-55
Source molecule (GenBank): NP_057578.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E3 ubiquitin-protein ligase RNF181 (47-55)
Chemical type: Peptide from protein
Sequence: DHHLPPPAA
Position: 47-55
Source molecule (GenBank): NP_057578.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 72.0

Epitope: leydig cell tumor 10 kDa protein homolog (61-69)
Chemical type: Peptide from protein
Sequence: IEHDVVMKA
Position: 61-69
Source molecule (GenBank): NP_054766.1
Assay category: MhcLigandElution
Result: Positive

Epitope: leydig cell tumor 10 kDa protein homolog (61-69)
Chemical type: Peptide from protein
Sequence: IEHDVVMKA
Position: 61-69
Source molecule (GenBank): NP_054766.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 137.0

Epitope: nodal modulator 1 precursor (301-309)
Chemical type: Peptide from protein
Sequence: TFDVAPSRL
Position: 301-309
Source molecule (GenBank): NP_055102.3
Assay category: MhcLigandElution
Result: Positive

Epitope: nodal modulator 1 precursor (301-309)
Chemical type: Peptide from protein
Sequence: TFDVAPSRL
Position: 301-309
Source molecule (GenBank): NP_055102.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 353.0

Epitope: E3 ubiquitin-protein ligase UHRF2 (582-590)
Chemical type: Peptide from protein
Sequence: NRYDGIYKV
Position: 582-590
Source molecule (GenBank): Q96PU4.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E3 ubiquitin-protein ligase UHRF2 (582-590)
Chemical type: Peptide from protein
Sequence: NRYDGIYKV
Position: 582-590
Source molecule (GenBank): Q96PU4.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 371.0

Epitope: transcription factor RAM2 splice variant b (5-13)
Chemical type: Peptide from protein
Sequence: TRYQIPKEV
Position: 5-13
Source molecule (GenBank): AAO17570.1
Assay category: MhcLigandElution
Result: Positive

Epitope: transcription factor RAM2 splice variant b (5-13)
Chemical type: Peptide from protein
Sequence: TRYQIPKEV
Position: 5-13
Source molecule (GenBank): AAO17570.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 450.0

Epitope: Glucose-6-phosphatase 2 (194-202)
Chemical type: Peptide from protein
Sequence: EHTPGVHMA
Position: 194-202
Source molecule (GenBank): Q9Z186.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1212.0

Epitope: Glucose-6-phosphatase 2 (307-315)
Chemical type: Peptide from protein
Sequence: YRFIKIPTH
Position: 307-315
Source molecule (GenBank): Q9Z186.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 1348.0

Epitope: Glucose-6-phosphatase 2 (249-257)
Chemical type: Peptide from protein
Sequence: IHIDSTPFA
Position: 249-257
Source molecule (GenBank): Q9Z186.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 2196.0

Epitope: Methionine--tRNA ligase, mitochondrial (386-394)
Chemical type: Peptide from protein
Sequence: YYDEKVVKL
Position: 386-394
Source molecule (GenBank): Q96GW9.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Methionine--tRNA ligase, mitochondrial (386-394)
Chemical type: Peptide from protein
Sequence: YYDEKVVKL
Position: 386-394
Source molecule (GenBank): Q96GW9.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 3733.0

Epitope: preproinsulin II (1-9)
Chemical type: Peptide from protein
Sequence: MALWMRFLP
Position: 1-9
Source molecule (GenBank): CAA28433.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 11913.0

Epitope: 60S ribosomal protein L9 (39-47)
Chemical type: Peptide from protein
Sequence: NHINVELSL
Position: 39-47
Source molecule (GenBank): NP_000652.2
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 27934.0

Epitope: Glucose-6-phosphatase 2 (210-218)
Chemical type: Peptide from protein
Sequence: TNVFLFLFA
Position: 210-218
Source molecule (GenBank): Q9Z186.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 68807.0

Epitope: glucose-6-phosphatase, catalytic, related (188-196)
Chemical type: Peptide from protein
Sequence: LVAEAFEHT
Position: 188-196
Source molecule (GenBank): NP_067306.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 76142.0

Epitope: Glucose-6-phosphatase 2 (191-199)
Chemical type: Peptide from protein
Sequence: EAFEHTPGV
Position: 191-199
Source molecule (GenBank): Q9Z186.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 77000.0

Epitope: Glucose-6-phosphatase 2 (273-281)
Chemical type: Peptide from protein
Sequence: INSEMFLRS
Position: 273-281
Source molecule (GenBank): Q9Z186.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 77000.0

Epitope: MAGE3 analog
Chemical type: Peptide, no natural source
Sequence: DHQAAFQYI
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 77000.0