Reference: Olivia Lie-Andersen; Mie Linder Hübbe; Krishanthi Subramaniam; Daniel Steen-Jensen; Ann Christina Bergmann; Daniel Justesen; Morten Orebo Holmström; Lance Turtle; Sune Justesen; Telma Lança; Morten Hansen. "Impact of peptide:HLA complex stability for the identification of SARS-CoV-2-specific CD8<sup>+</sup>T cells." Frontiers in immunology (2023).

Epitope: LTD
Chemical type: Peptide from protein
Sequence: LTDEMIAQY
Position: 865-873
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LTD
Chemical type: Peptide from protein
Sequence: LTDEMIAQY
Position: 865-873
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LTD
Chemical type: Peptide from protein
Sequence: LTDEMIAQY
Position: 865-873
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LTD
Chemical type: Peptide from protein
Sequence: LTDEMIAQY
Position: 865-873
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LTD
Chemical type: Peptide from protein
Sequence: LTDEMIAQY
Position: 865-873
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: WTA
Chemical type: Peptide from protein
Sequence: WTAGAAAYY
Position: 258-266
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: WTA
Chemical type: Peptide from protein
Sequence: WTAGAAAYY
Position: 258-266
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: WTA
Chemical type: Peptide from protein
Sequence: WTAGAAAYY
Position: 258-266
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: FND
Chemical type: Peptide from protein
Sequence: FNDGVYFAS
Position: 86-94
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FND
Chemical type: Peptide from protein
Sequence: FNDGVYFAS
Position: 86-94
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FND
Chemical type: Peptide from protein
Sequence: FNDGVYFAS
Position: 86-94
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: NID
Chemical type: Peptide from protein
Sequence: NIDGYFKIY
Position: 196-204
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NID
Chemical type: Peptide from protein
Sequence: NIDGYFKIY
Position: 196-204
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NID
Chemical type: Peptide from protein
Sequence: NIDGYFKIY
Position: 196-204
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: TSN
Chemical type: Peptide from protein
Sequence: TSNQVAVLY
Position: 604-612
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TSN
Chemical type: Peptide from protein
Sequence: TSNQVAVLY
Position: 604-612
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TSN
Chemical type: Peptide from protein
Sequence: TSNQVAVLY
Position: 604-612
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: NSF
Chemical type: Peptide from protein
Sequence: NSFTRGVYY
Position: 30-38
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NSF
Chemical type: Peptide from protein
Sequence: NSFTRGVYY
Position: 30-38
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NSF
Chemical type: Peptide from protein
Sequence: NSFTRGVYY
Position: 30-38
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: CND
Chemical type: Peptide from protein
Sequence: CNDPFLGVY
Position: 136-144
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CND
Chemical type: Peptide from protein
Sequence: CNDPFLGVY
Position: 136-144
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CND
Chemical type: Peptide from protein
Sequence: CNDPFLGVY
Position: 136-144
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: YLQ
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: YLQ
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: YLQ
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: YLQ
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: YLQ
Chemical type: Peptide from protein
Sequence: YLQPRTFLL
Position: 269-277
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: SII
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SII
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SII
Chemical type: Peptide from protein
Sequence: SIIAYTMSL
Position: 691-699
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: LLF
Chemical type: Peptide from protein
Sequence: LLFNKVTLA
Position: 821-829
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LLF
Chemical type: Peptide from protein
Sequence: LLFNKVTLA
Position: 821-829
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LLF
Chemical type: Peptide from protein
Sequence: LLFNKVTLA
Position: 821-829
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: HLM
Chemical type: Peptide from protein
Sequence: HLMSFPQSA
Position: 1048-1056
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: HLM
Chemical type: Peptide from protein
Sequence: HLMSFPQSA
Position: 1048-1056
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: HLM
Chemical type: Peptide from protein
Sequence: HLMSFPQSA
Position: 1048-1056
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: FLH
Chemical type: Peptide from protein
Sequence: FLHVTYVPA
Position: 1062-1070
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FLH
Chemical type: Peptide from protein
Sequence: FLHVTYVPA
Position: 1062-1070
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FLH
Chemical type: Peptide from protein
Sequence: FLHVTYVPA
Position: 1062-1070
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: RLQ
Chemical type: Peptide from protein
Sequence: RLQSLQTYV
Position: 1000-1008
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: RLQ
Chemical type: Peptide from protein
Sequence: RLQSLQTYV
Position: 1000-1008
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: RLQ
Chemical type: Peptide from protein
Sequence: RLQSLQTYV
Position: 1000-1008
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: FQF
Chemical type: Peptide from protein
Sequence: FQFCNDPFL
Position: 133-141
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FQF
Chemical type: Peptide from protein
Sequence: FQFCNDPFL
Position: 133-141
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FQF
Chemical type: Peptide from protein
Sequence: FQFCNDPFL
Position: 133-141
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: MIA
Chemical type: Peptide from protein
Sequence: MIAQYTSAL
Position: 869-877
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MIA
Chemical type: Peptide from protein
Sequence: MIAQYTSAL
Position: 869-877
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MIA
Chemical type: Peptide from protein
Sequence: MIAQYTSAL
Position: 869-877
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: VLN
Chemical type: Peptide from protein
Sequence: VLNDILSRL
Position: 976-984
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VLN
Chemical type: Peptide from protein
Sequence: VLNDILSRL
Position: 976-984
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VLN
Chemical type: Peptide from protein
Sequence: VLNDILSRL
Position: 976-984
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: KQI
Chemical type: Peptide from protein
Sequence: KQIYKTPPI
Position: 786-794
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: FTI
Chemical type: Peptide from protein
Sequence: FTISVTTEI
Position: 718-726
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: FIA
Chemical type: Peptide from protein
Sequence: FIAGLIAIV
Position: 1220-1228
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: VTW
Chemical type: Peptide from protein
Sequence: VTWFHAIHV
Position: 62-70
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: VLY
Chemical type: Peptide from protein
Sequence: VLYENQKLI
Position: 915-923
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: GMS
Chemical type: Peptide from protein
Sequence: GMSRIGMEV
Position: 316-324
Source molecule (GenBank): P0DTC9.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: NLN
Chemical type: Peptide from protein
Sequence: NLNESLIDL
Position: 1192-1200
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: VVF
Chemical type: Peptide from protein
Sequence: VVFLHVTYV
Position: 1060-1068
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: WLM
Chemical type: Peptide from protein
Sequence: WLMWLIINL
Position: 2363-2371
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: GLM
Chemical type: Peptide from protein
Sequence: GLMWLSYFI
Position: 89-97
Source molecule (GenBank): P0DTC5.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: GVY
Chemical type: Peptide from protein
Sequence: GVYFASTEK
Position: 89-97
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GVY
Chemical type: Peptide from protein
Sequence: GVYFASTEK
Position: 89-97
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GVY
Chemical type: Peptide from protein
Sequence: GVYFASTEK
Position: 89-97
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GVY
Chemical type: Peptide from protein
Sequence: GVYFASTEK
Position: 89-97
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GVY
Chemical type: Peptide from protein
Sequence: GVYFASTEK
Position: 89-97
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: KCY
Chemical type: Peptide from protein
Sequence: KCYGVSPTK
Position: 378-386
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KCY
Chemical type: Peptide from protein
Sequence: KCYGVSPTK
Position: 378-386
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KCY
Chemical type: Peptide from protein
Sequence: KCYGVSPTK
Position: 378-386
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KCY
Chemical type: Peptide from protein
Sequence: KCYGVSPTK
Position: 378-386
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KCY
Chemical type: Peptide from protein
Sequence: KCYGVSPTK
Position: 378-386
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: TLK
Chemical type: Peptide from protein
Sequence: TLKSFTVEK
Position: 302-310
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TLK
Chemical type: Peptide from protein
Sequence: TLKSFTVEK
Position: 302-310
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TLK
Chemical type: Peptide from protein
Sequence: TLKSFTVEK
Position: 302-310
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: GIY
Chemical type: Peptide from protein
Sequence: GIYQTSNFR
Position: 311-319
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GIY
Chemical type: Peptide from protein
Sequence: GIYQTSNFR
Position: 311-319
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GIY
Chemical type: Peptide from protein
Sequence: GIYQTSNFR
Position: 311-319
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: KST
Chemical type: Peptide from protein
Sequence: KSTNLVKNK
Position: 529-537
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KST
Chemical type: Peptide from protein
Sequence: KSTNLVKNK
Position: 529-537
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: KST
Chemical type: Peptide from protein
Sequence: KSTNLVKNK
Position: 529-537
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: ASA
Chemical type: Peptide from protein
Sequence: ASANLAATK
Position: 1020-1028
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ASA
Chemical type: Peptide from protein
Sequence: ASANLAATK
Position: 1020-1028
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ASA
Chemical type: Peptide from protein
Sequence: ASANLAATK
Position: 1020-1028
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-High

Epitope: QIY
Chemical type: Peptide from protein
Sequence: QIYKTPPIK
Position: 787-795
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: SVY
Chemical type: Peptide from protein
Sequence: SVYAWNRKR
Position: 349-357
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: QIA
Chemical type: Peptide from protein
Sequence: QIAPGQTGK
Position: 409-417
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: TLA
Chemical type: Peptide from protein
Sequence: TLADAGFIK
Position: 827-835
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: KVF
Chemical type: Peptide from protein
Sequence: KVFRSSVLH
Position: 41-49
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: SST
Chemical type: Peptide from protein
Sequence: SSTASALGK
Position: 939-947
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: EIL
Chemical type: Peptide from protein
Sequence: EILPVSMTK
Position: 725-733
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: VLK
Chemical type: Peptide from protein
Sequence: VLKGVKLHY
Position: 1264-1272
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: NQF
Chemical type: Peptide from protein
Sequence: NQFNSAIGK
Position: 925-933
Source molecule (GenBank): QHD43416.1
Assay category: MhcBinding
Result: Positive-Low