LiteFold/IEDB huggingface dataset:
Reference: T Maruyama; S Oak; T R Hall; J P Banga; E Ortqvist; R A Ettinger; J Endl; C S Hampe. "Autoantibody epitopes to the smaller isoform of glutamate decarboxylase do not differ in Swedish and Japanese type 1 diabetes patients and may be associated with high-risk human leucocyte antigen class II alleles." Clinical and experimental immunology (2007).

Epitope: GAD65 (483-499 + 556-585)
Chemical type: Discontinuous protein residues
Discontinuous residues: N483, I484, I485, K486, N487, R488, E489, G490, Y491, E492, M493, V494, F495, D496, G497, K498, P499, F556, F557, R558, M559, V560, I561, S562, N563, P564, A565, A566, T567, H568, Q569, D570, I571, D572, F573, L574, I575, E576, E577, I578, E579, R580, L581, G582, Q583, D584, L585
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive
Host:  0-84 years
Reference: H L Schwartz; J M Chandonia; S F Kash; J Kanaani; E Tunnell; A Domingo; F E Cohen; J P Banga; A M Madec; W Richter; S Baekkeskov. "High-resolution autoreactive epitope mapping and structural modeling of the 65 kDa form of human glutamic acid decarboxylase." Journal of molecular biology (1999).

Epitope: GAD65 (242-282)
Chemical type: Peptide from protein
Sequence: GGAISNMYAMMIARFKMFPEVKEKGMAALPRLIAFTSEHSH
Position: 242-282
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: MAb M4 epitopic residue
Chemical type: Discontinuous protein residues
Discontinuous residues: K358
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: GAD65 (532-540)
Chemical type: Peptide from protein
Sequence: VIKARMMEY
Position: 532-540
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive
Host: M 28 years

Epitope: GAD65 (532-540)
Chemical type: Peptide from protein
Sequence: VIKARMMEY
Position: 532-540
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: MAb M5 epitopic residues
Chemical type: Discontinuous protein residues
Discontinuous residues: E517, E520, E521, S524, S527, V532
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: MAb M2 epitopic residues
Chemical type: Discontinuous protein residues
Discontinuous residues: E517, E521
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: MAb M10 epitopic residue
Chemical type: Discontinuous protein residues
Discontinuous residues: E264
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: GAD65 (483-499)
Chemical type: Peptide from protein
Sequence: NIIKNREGYEMVFDGKP
Position: 483-499
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: GAD65 (556-585)
Chemical type: Peptide from protein
Sequence: FFRMVISNPAATHQDIDFLIEEIERLGQDL
Position: 556-585
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive

Epitope: MAb M8, M9 epitopic residues
Chemical type: Discontinuous protein residues
Discontinuous residues: R536, Y540
Source molecule (GenBank): Q05329.1
Assay category: BCell
Result: Positive
Reference: Peter Klucar; Peter F Barnes; Ying Kong; Susan T Howard; Xiuhua Pang; Fang-Fang Huang; Amy R Tvinnereim; Buka Samten; Homayoun Shams. "Vaccination strategies to enhance local immunity and protection against Mycobacteriun tuberculosis." Vaccine (2009).

Epitope: CFP10<sub>71-90</sub>
Chemical type: Peptide from protein
Sequence: EISTNIRQAGVQYSRADEEQ
Position: 71-90
Source molecule (GenBank): NP_218391.1
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: CFP10<sub>71-90</sub>
Chemical type: Peptide from protein
Sequence: EISTNIRQAGVQYSRADEEQ
Position: 71-90
Source molecule (GenBank): NP_218391.1
Assay category: TCell
Result: Negative
Host:  6-8 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: CFP10<sub>71-90</sub>
Chemical type: Peptide from protein
Sequence: EISTNIRQAGVQYSRADEEQ
Position: 71-90
Source molecule (GenBank): NP_218391.1
Assay category: TCell
Result: Negative
Host:  6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: CFP10<sub>71-90</sub>
Chemical type: Peptide from protein
Sequence: EISTNIRQAGVQYSRADEEQ
Position: 71-90
Source molecule (GenBank): NP_218391.1
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Juliane Bongartz; Nicole Bruni; Michal Or-Guil. "Epitope mapping using randomly generated peptide libraries." Methods in molecular biology (Clifton, N.J.) (2009).

Chemical type: Peptide, no natural source
Sequence: THEDFRYDDVFEGN
Assay category: BCell
Result: Positive

Chemical type: Peptide, no natural source
Sequence: FFDEIIHSCRSQNG
Assay category: BCell
Result: Positive

Chemical type: Peptide, no natural source
Sequence: VRQVQRSKKMHKKG
Assay category: BCell
Result: Positive
Reference: Clinton E Leysath; Arthur F Monzingo; Jennifer A Maynard; Jason Barnett; George Georgiou; Brent L Iverson; Jon D Robertus. "Crystal structure of the engineered neutralizing antibody M18 complexed to domain 4 of the anthrax protective antigen." Journal of molecular biology (2009).

Epitope: Epitope of M18 scFv on PA domain 4 (PAD4)
Chemical type: Discontinuous protein residues
Discontinuous residues: I675, D677, E679, L681, K682, E683, V684, I685, D687, N711, D712, K713, L714, P715, Y717, S719, S746, N748
Source molecule (GenBank): P13423.2
Assay category: BCell
Result: Positive
Quantitative measurement: 1600000.0
Host: F

Epitope: Epitope of M18 scFv on PA domain 4 (PAD4)
Chemical type: Discontinuous protein residues
Discontinuous residues: I675, D677, E679, L681, K682, E683, V684, I685, D687, N711, D712, K713, L714, P715, Y717, S719, S746, N748
Source molecule (GenBank): P13423.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.8
Host: F

Epitope: Epitope of M18 scFv on PA domain 4 (PAD4)
Chemical type: Discontinuous protein residues
Discontinuous residues: I675, D677, E679, L681, K682, E683, V684, I685, D687, N711, D712, K713, L714, P715, Y717, S719, S746, N748
Source molecule (GenBank): P13423.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.029
Host: F

Epitope: Epitope of M18 scFv on PA domain 4 (PAD4)
Chemical type: Discontinuous protein residues
Discontinuous residues: I675, D677, E679, L681, K682, E683, V684, I685, D687, N711, D712, K713, L714, P715, Y717, S719, S746, N748
Source molecule (GenBank): P13423.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.000048
Host: F
Reference: Wayne D Crill; Holly R Hughes; Mark J Delorey; Gwong-Jen J Chang. "Humoral immune responses of dengue fever patients using epitope-specific serotype-2 virus-like particle antigens." PloS one (2009).

Chemical type: Discontinuous protein residues
Discontinuous residues: G106, L107
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: G106, L107
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: G106
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: G106
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: L107
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: E311
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: G106, L107, K310, E311, P364
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: K305, K310, E311, P364, K388
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: G106, L107, P364
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive

Chemical type: Discontinuous protein residues
Discontinuous residues: K305
Source molecule (GenBank): AAM75194.1
Assay category: BCell
Result: Positive
Reference: François-Xavier Theillet; Frederick A Saul; Brigitte Vulliez-Le Normand; Sylviane Hoos; Franco Felici; Andrej Weintraub; Laurence A Mulard; Armelle Phalipon; Muriel Delepierre; Graham A Bentley. "Structural mimicry of O-antigen by a peptide revealed in a complex with an antibody raised against Shigella flexneri serotype 2a." Journal of molecular biology (2009).

Epitope: [AB(E)CD]<sub>3</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 1160.0

Epitope: [AB(E)CD]<sub>3</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 600.0

Epitope: [AB(E)CD]<sub>3</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 110000.0

Epitope: [AB(E)CD]<sub>3</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 0.076

Epitope: [AB(E)CD]<sub>2</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 0.065

Epitope: [AB(E)CD]<sub>2</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 1040.0

Epitope: [AB(E)CD]<sub>2</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 56000.0

Epitope: [AB(E)CD]<sub>2</sub>
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 1000.0
Reference: Sheng-Fan Wang; Kuan-Hsuan Chen; Arunee Thitithanyanont; Ling Yao; Yuan-Ming Lee; Yu-Jiun Chan; Shih-Jen Liu; Pele Chong; Wu-Tse Liu; Jason C Huang; Yi-Ming Arthur Chen. "Generating and characterizing monoclonal and polyclonal antibodies against avian H5N1 hemagglutinin protein." Biochemical and biophysical research communications (2009).

Epitope: H5N1 HA1 (208-214)
Chemical type: Peptide from protein
Sequence: TKLYQNPTTYISVGT
Position: 204-218
Source molecule (GenBank): ABW90125.1
Assay category: BCell
Result: Positive

Epitope: H5N1 HA1 (208-214)
Chemical type: Peptide from protein
Sequence: TKLYQNPTTYISVGT
Position: 204-218
Source molecule (GenBank): ABW90125.1
Assay category: BCell
Result: Negative

Epitope: H5N1 HA1 (208-214)
Chemical type: Peptide from protein
Sequence: TKLYQNPTTYISVGT
Position: 204-218
Source molecule (GenBank): ABW90125.1
Assay category: BCell
Result: Negative

Epitope: H5N1 HA1 (208-214)
Chemical type: Peptide from protein
Sequence: TKLYQNPTTYISVGT
Position: 204-218
Source molecule (GenBank): ABW90125.1
Assay category: BCell
Result: Negative

Epitope: H5N1 HA1 (208-214)
Chemical type: Peptide from protein
Sequence: TKLYQNPTTYISVGT
Position: 204-218
Source molecule (GenBank): ABW90125.1
Assay category: BCell
Result: Positive
Reference: Miles C Scotcher; Jeffery A McGarvey; Eric A Johnson; Larry H Stanker. "Epitope characterization and variable region sequence of f1-40, a high-affinity monoclonal antibody to botulinum neurotoxin type a (Hall strain)." PloS one (2009).

Chemical type: Peptide, no natural source
Sequence: TRQPDRS
Assay category: BCell
Result: Positive
Host: F

Chemical type: Peptide, no natural source
Sequence: SLQPDRS
Assay category: BCell
Result: Positive
Host: F

Epitope: QPD
Chemical type: Peptide from protein
Sequence: QPD
Position: 139-141
Source molecule (GenBank): ABS38337.1
Assay category: BCell
Result: Positive
Host: F
Reference: Peter T Beernink; Carla LoPasso; Antonella Angiolillo; Franco Felici; Dan Granoff. "A region of the N-terminal domain of meningococcal factor H-binding protein that elicits bactericidal antibody across antigenic variant groups." Molecular immunology (2009).

Epitope: JAR 4
Chemical type: Discontinuous protein residues
Discontinuous residues: D44, H45, K46, Y76, G77, N78
Source molecule (GenBank): ACJ45782.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: JAR 4
Chemical type: Discontinuous protein residues
Discontinuous residues: D44, H45, K46, Y76, G77, N78
Source molecule (GenBank): ACJ45782.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: JAR 4
Chemical type: Discontinuous protein residues
Discontinuous residues: D44, H45, K46, Y76, G77, N78
Source molecule (GenBank): ACJ45782.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: JAR 4
Chemical type: Discontinuous protein residues
Discontinuous residues: D44, H45, K46, Y76, G77, N78
Source molecule (GenBank): ACJ45782.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: JAR 4
Chemical type: Discontinuous protein residues
Discontinuous residues: D44, H45, K46, Y76, G77, N78
Source molecule (GenBank): ACJ45782.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 1
Chemical type: Peptide, no natural source
Sequence: HDHKLEGTE
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 2
Chemical type: Peptide, no natural source
Sequence: CGGVYDDKTGCA
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 3
Chemical type: Peptide, no natural source
Sequence: HDHKTQLDP
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 4
Chemical type: Peptide, no natural source
Sequence: WTLAVFDHKAQT
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 5
Chemical type: Peptide, no natural source
Sequence: GCMGYDHRSGCV
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 6
Chemical type: Peptide, no natural source
Sequence: FHDHKTANQ
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: 7
Chemical type: Peptide, no natural source
Sequence: HDHRIWPLDVTA
Assay category: BCell
Result: Positive
Host: F 4-6 weeks
Reference: A S Mustafa. "Th1 cell reactivity and HLA-DR binding prediction for promiscuous recognition of MPT63 (Rv1926c), a major secreted protein of Mycobacterium tuberculosis." Scandinavian journal of immunology (2009).

Epitope: P1
Chemical type: Peptide from protein
Sequence: MKLTTMIKTAVAVVAMAAIATFAAP
Position: 1-25
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: MAAIATFAAPVALAAYPITGKLGSE
Position: 16-40
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P3
Chemical type: Peptide from protein
Sequence: YPITGKLGSELTMTDTVGQVVLGWK
Position: 31-55
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P4
Chemical type: Peptide from protein
Sequence: TVGQVVLGWKVSDLKSSTAVIPGYP
Position: 46-70
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P5
Chemical type: Peptide from protein
Sequence: SSTAVIPGYPVAGQVWEATATVNAI
Position: 61-85
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P6
Chemical type: Peptide from protein
Sequence: WEATATVNAIRGSVTPAVSQFNART
Position: 76-100
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P7
Chemical type: Peptide from protein
Sequence: PAVSQFNARTADGINYRVLWQAAGP
Position: 91-115
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P8
Chemical type: Peptide from protein
Sequence: YRVLWQAAGPDTISGATIPQGEQST
Position: 106-130
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P9
Chemical type: Peptide from protein
Sequence: ATIPQGEQSTGKIYFDVTGPSPTIV
Position: 121-145
Source molecule (GenBank): NP_216442.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Jie Liu; Tracy J Ruckwardt; Man Chen; Teresa R Johnson; Barney S Graham. "Characterization of respiratory syncytial virus M- and M2-specific CD4 T cells in a murine model." Journal of virology (2009).

Epitope: M<sub>209-223</sub>
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): P03419.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: M<sub>209-223</sub>
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): P03419.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M<sub>209-223</sub>
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): P03419.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M<sub>209-223</sub>
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): P03419.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M<sub>209-223</sub>
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): P03419.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: M2<sub>25-39</sub>
Chemical type: Peptide from protein
Sequence: HNYFEWPPHALLVRQ
Position: 25-39
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M2<sub>25-39</sub>
Chemical type: Peptide from protein
Sequence: HNYFEWPPHALLVRQ
Position: 25-39
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: M2<sub>25-39</sub>
Chemical type: Peptide from protein
Sequence: HNYFEWPPHALLVRQ
Position: 25-39
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: M2<sub>25-39</sub>
Chemical type: Peptide from protein
Sequence: HNYFEWPPHALLVRQ
Position: 25-39
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: M2<sub>25-39</sub>
Chemical type: Peptide from protein
Sequence: HNYFEWPPHALLVRQ
Position: 25-39
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 8-10 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Anita Schmitt; Clemens Bechter; Junxia Yao; Marlies Goetz; Birgit Maccari; Peter Schauwecker; Markus Wiesneth; Michael Schmitt. "Cytomegalovirus vaccination of leukemia and lymphoma patients after allogeneic stem cell transplantation--validation of a peptide vaccine." Journal of immunological methods (2009).

Epitope: CMV pp65 495-503
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): YP_002608275.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CMV pp65 495-503
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): YP_002608275.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CMV pp65 495-503
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): YP_002608275.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Michael D Valentino; Lucinda L Hensley; Denise Skrombolas; Pamela L McPherson; Matthew D Woolard; Thomas H Kawula; Jeffrey A Frelinger; John G Frelinger. "Identification of a dominant CD4 T cell epitope in the membrane lipoprotein Tul4 from Francisella tularensis LVS." Molecular immunology (2009).

Epitope: F. tularensis Tul4 (86-99)
Chemical type: Peptide from protein
Sequence: RLQWQAPEGSKCHD
Position: 62-75
Source molecule (GenBank): AAO43577.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell hybridoma
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: F. tularensis Tul4 (86-99)
Chemical type: Peptide from protein
Sequence: RLQWQAPEGSKCHD
Position: 62-75
Source molecule (GenBank): AAO43577.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: F. tularensis Tul4 (86-99)
Chemical type: Peptide from protein
Sequence: RLQWQAPEGSKCHD
Position: 62-75
Source molecule (GenBank): AAO43577.1
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: F. tularensis Tul4 (86-99)
Chemical type: Peptide from protein
Sequence: RLQWQAPEGSKCHD
Position: 62-75
Source molecule (GenBank): AAO43577.1
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: F. tularensis Tul4 (86-99)
Chemical type: Peptide from protein
Sequence: RLQWQAPEGSKCHD
Position: 62-75
Source molecule (GenBank): AAO43577.1
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: spleen
Culture conditions: Cell Line / Clone
Reference: Silvia Guglietta; Anna Rosa Garbuglia; Leonidas Salichos; Lionello Ruggeri; Antonella Folgori; Maria Paola Perrone; Cristina Camperio; Vincenzo Mellace; Giuseppe Maio; Patrizia Maio; Maria Rosaria Capobianchi; Enea Spada; Nicola Gargano; Cristiano Scottà; Enza Piccolella; Paola Del Porto. "Impact of viral selected mutations on T cell mediated immunity in chronically evolving and self limiting acute HCV infection." Virology (2009).

Epitope: HSV core (41-49)
Chemical type: Peptide from protein
Sequence: GPRLGVRAT
Position: 41-49
Source molecule (GenBank): BAA09072.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1639–1653 of HCV
Chemical type: Peptide from protein
Sequence: HPITKYIMACMSADL
Position: 1639-1653
Source molecule (GenBank): BAA09072.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS5A 1993–2001
Chemical type: Peptide from protein
Sequence: VVSDFKTWL
Position: 1993-2001
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1189–1203 of HCV
Chemical type: Peptide from protein
Sequence: AVCTRGVAKALQFIP
Position: 1189-1203
Source molecule (GenBank): AAC03058.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo