Reference: M L Linn; L Mateo; J Gardner; A Suhrbier. "Alphavirus-specific cytotoxic T lymphocytes recognize a cross-reactive epitope from the capsid protein and can eliminate virus from persistently infected macrophages." Journal of virology (1998).

Epitope: RRV capsid (11-30)
Chemical type: Peptide from protein
Sequence: GRRWRPRPAFRPWQVPMQPT
Position: 11-30
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (21-40)
Chemical type: Peptide from protein
Sequence: RPWQVPMQPTPTMVTPMLQA
Position: 21-40
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (31-50)
Chemical type: Peptide from protein
Sequence: PTMVTPMLQAPDLQAQQMQQ
Position: 31-50
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (41-60)
Chemical type: Peptide from protein
Sequence: PDLQAQQMQQLISAVSALTT
Position: 41-60
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (51-70)
Chemical type: Peptide from protein
Sequence: LISAVSALTTKQNVKAPKGQ
Position: 51-70
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (61-80)
Chemical type: Peptide from protein
Sequence: KQNVKAPKGQRKQKQQKPKE
Position: 61-80
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (71-90)
Chemical type: Peptide from protein
Sequence: RKQKQQKPKEKKEKQKKKPT
Position: 71-90
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (81-100)
Chemical type: Peptide from protein
Sequence: KKEKQKKKPTXKKKQQQKPK
Position: 81-100
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (91-110)
Chemical type: Peptide from protein
Sequence: XKKKQQQKPKPQAKKKKPGR
Position: 91-110
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (101-120)
Chemical type: Peptide from protein
Sequence: PQAKKKKPGRRERMCMKIEN
Position: 101-120
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (111-130)
Chemical type: Peptide from protein
Sequence: RERMCMKIENDCIFEVKLDG
Position: 111-130
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (131-150)
Chemical type: Peptide from protein
Sequence: KVTGYACLVGDKVMKPAHVK
Position: 131-150
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (141-160)
Chemical type: Peptide from protein
Sequence: DKVMKPAHVKGTIDNPDLAK
Position: 141-160
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (151-170)
Chemical type: Peptide from protein
Sequence: GTIDNPDLAKLTYKKSSKYD
Position: 151-170
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (161-180)
Chemical type: Peptide from protein
Sequence: LTYKKSSKYDLECAQIPVHM
Position: 161-180
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (171-190)
Chemical type: Peptide from protein
Sequence: LECAQIPVHMKSDASKYTHE
Position: 171-190
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (181-200)
Chemical type: Peptide from protein
Sequence: KSDASKYTHEKPEGHYNWHH
Position: 181-200
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (191-210)
Chemical type: Peptide from protein
Sequence: KPEGHYNWHHGAVQYSXGRF
Position: 191-210
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (204-212)
Chemical type: Peptide from protein
Sequence: QYSXGRFTI
Position: 204-212
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: RRV capsid (211-230)
Chemical type: Peptide from protein
Sequence: TIPTGAGKPGDSGRPIFDNK
Position: 211-230
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (231-250)
Chemical type: Peptide from protein
Sequence: GRVVAIVLGGANEGARTALS
Position: 231-250
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (241-260)
Chemical type: Peptide from protein
Sequence: ANEGARTALSVVTWTKDMVT
Position: 241-260
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RRV capsid (251-270)
Chemical type: Peptide from protein
Sequence: VVTWTKDMVTRVTPEGTEEW
Position: 251-270
Source molecule (GenBank): NP_740682.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo