Reference: Muzamil Yaqub Want; Anna Konstorum; Ruea-Yea Huang; Vaibhav Jain; Satoko Matsueda; Takemasa Tsuji; Amit Lugade; Kunle Odunsi; Richard Koya; Sebastiano Battaglia. "Neoantigens retention in patient derived xenograft models mediates autologous T cells activation in ovarian cancer." Oncoimmunology (2019).

Epitope: SSC4D neo
Chemical type: Peptide, no natural source
Sequence: YGTGHILLY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SSC4D neo
Chemical type: Peptide, no natural source
Sequence: YGTGHILLY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SSC4D neo
Chemical type: Peptide, no natural source
Sequence: YGTGHILLY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SSC4D neo
Chemical type: Peptide, no natural source
Sequence: YGTGHILLY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SSC4D neo
Chemical type: Peptide, no natural source
Sequence: YGTGHILLY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LAMB3 neo
Chemical type: Peptide, no natural source
Sequence: YVNPVSLQL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A neo
Chemical type: Peptide, no natural source
Sequence: HCPHCPSVCF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CDK8 neo
Chemical type: Peptide, no natural source
Sequence: LLTSEPIFY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PRR14L neo
Chemical type: Peptide, no natural source
Sequence: LPSTDSETG
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GALNT7 neo
Chemical type: Peptide, no natural source
Sequence: DATTCTVPL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NAV1 neo
Chemical type: Peptide, no natural source
Sequence: MAKAKAVAL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NAV1 neo
Chemical type: Peptide, no natural source
Sequence: MAKAKAVAL
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NAV1 neo
Chemical type: Peptide, no natural source
Sequence: MAKAKAVAL
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TRO neo
Chemical type: Peptide, no natural source
Sequence: SVGACGFSY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TRO neo
Chemical type: Peptide, no natural source
Sequence: SVGACGFSY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TRO neo
Chemical type: Peptide, no natural source
Sequence: SVGACGFSY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: INO80 neo
Chemical type: Peptide, no natural source
Sequence: EVPAAGRGH
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CSF2RB neo
Chemical type: Peptide, no natural source
Sequence: LPEKQASSF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CNDP1 neo
Chemical type: Peptide, no natural source
Sequence: EEYPNSSRV
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OR5H14 neo
Chemical type: Peptide, no natural source
Sequence: DIIPLKISY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: FHL1 neo
Chemical type: Peptide, no natural source
Sequence: VSKARKSPV
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A neo
Chemical type: Peptide, no natural source
Sequence: VCFPVHSEM
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CSMD2 neo
Chemical type: Peptide, no natural source
Sequence: ASYRSSVSF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A neo
Chemical type: Peptide, no natural source
Sequence: FPVHSEMLL
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CLEC10A neo
Chemical type: Peptide, no natural source
Sequence: FPVHSEMLL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CLEC10A neo
Chemical type: Peptide, no natural source
Sequence: FPVHSEMLL
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VSIG4 neo
Chemical type: Peptide, no natural source
Sequence: VVKDFSKLL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STYK1 neo
Chemical type: Peptide, no natural source
Sequence: YPEVLPTSI
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DDX60L neo
Chemical type: Peptide, no natural source
Sequence: YVIFDEGHY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: DDX60L neo
Chemical type: Peptide, no natural source
Sequence: YVIFDEGHY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DDX60L neo
Chemical type: Peptide, no natural source
Sequence: YVIFDEGHY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: DDX60L neo
Chemical type: Peptide, no natural source
Sequence: YVIFDEGHY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DDX60L neo
Chemical type: Peptide, no natural source
Sequence: YVIFDEGHY
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: USH2A neo
Chemical type: Peptide, no natural source
Sequence: LIPEIPVVY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HNRNPUL1 neo
Chemical type: Peptide, no natural source
Sequence: HPEPGGYSG
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OR51B4 neo
Chemical type: Peptide, no natural source
Sequence: NLACADITF
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OR51B4 neo
Chemical type: Peptide, no natural source
Sequence: NLACADITF
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: OR51B4 neo
Chemical type: Peptide, no natural source
Sequence: NLACADITF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PATZ1 neo
Chemical type: Peptide, no natural source
Sequence: RGFSSASTL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: BCAN neo
Chemical type: Peptide, no natural source
Sequence: ETVLRYRCR
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PTBP3 neo
Chemical type: Peptide, no natural source
Sequence: EIISLGLVF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: KPNA1 neo
Chemical type: Peptide, no natural source
Sequence: QMEKGSQAY
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SSC4D wt
Chemical type: Peptide from protein
Sequence: YGTGHILLD
Position: 246-254
Source molecule (GenBank): Q8WTU2.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SSC4D wt
Chemical type: Peptide from protein
Sequence: YGTGHILLD
Position: 246-254
Source molecule (GenBank): Q8WTU2.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SSC4D wt
Chemical type: Peptide from protein
Sequence: YGTGHILLD
Position: 246-254
Source molecule (GenBank): Q8WTU2.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SSC4D wt
Chemical type: Peptide from protein
Sequence: YGTGHILLD
Position: 246-254
Source molecule (GenBank): Q8WTU2.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SSC4D wt
Chemical type: Peptide from protein
Sequence: YGTGHILLD
Position: 246-254
Source molecule (GenBank): Q8WTU2.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: LAMB3 wt
Chemical type: Peptide from protein
Sequence: DVNPVSLQL
Position: 100-108
Source molecule (GenBank): Q13751.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A wt
Chemical type: Peptide from protein
Sequence: HCPHCPSVCV
Position: 134-143
Source molecule (GenBank): Q8IUN9.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CDK8 wt
Chemical type: Peptide from protein
Sequence: LLTSEPIFH
Position: 123-131
Source molecule (GenBank): F6QTA4
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PRR14L wt
Chemical type: Peptide from protein
Sequence: PPSTDSETG
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GALNT7 wt
Chemical type: Peptide from protein
Sequence: DTTTCTVPL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NAV1 wt
Chemical type: Peptide from protein
Sequence: TAKAKAVAL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NAV1 wt
Chemical type: Peptide from protein
Sequence: TAKAKAVAL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NAV1 wt
Chemical type: Peptide from protein
Sequence: TAKAKAVAL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TRO wt
Chemical type: Peptide from protein
Sequence: SLGACGFSY
Position: 348-356
Source molecule (GenBank): A0A087X070
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TRO wt
Chemical type: Peptide from protein
Sequence: SLGACGFSY
Position: 348-356
Source molecule (GenBank): A0A087X070
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TRO wt
Chemical type: Peptide from protein
Sequence: SLGACGFSY
Position: 348-356
Source molecule (GenBank): A0A087X070
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: INO80 wt
Chemical type: Peptide from protein
Sequence: EMPAAGRGH
Position: 1418-1426
Source molecule (GenBank): Q9ULG1.2
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CSF2RB wt
Chemical type: Peptide from protein
Sequence: PPEKQASSF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CNDP1 wt
Chemical type: Peptide from protein
Sequence: EEYRNSSRV
Position: 318-326
Source molecule (GenBank): Q96KN2.4
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OR5H14 wt
Chemical type: Peptide from protein
Sequence: DIIPLLKISY
Position: 180-189
Source molecule (GenBank): A6NHG9.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: FHL1 wt
Chemical type: Peptide from protein
Sequence: VSKARKPPV
Position: 241-249
Source molecule (GenBank): Q13642.4
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A wt
Chemical type: Peptide from protein
Sequence: VCVPVHSEM
Position: 141-149
Source molecule (GenBank): Q8IUN9.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CSMD2 wt
Chemical type: Peptide from protein
Sequence: GSYRSSVSF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A wt
Chemical type: Peptide from protein
Sequence: VPVHSEMLL
Position: 143-151
Source molecule (GenBank): Q8IUN9.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CLEC10A wt
Chemical type: Peptide from protein
Sequence: VPVHSEMLL
Position: 143-151
Source molecule (GenBank): Q8IUN9.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CLEC10A wt
Chemical type: Peptide from protein
Sequence: VPVHSEMLL
Position: 143-151
Source molecule (GenBank): Q8IUN9.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VSIG4 wt
Chemical type: Peptide from protein
Sequence: VVKDSSKLL
Position: 156-164
Source molecule (GenBank): H7C062.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STYK1 wt
Chemical type: Peptide from protein
Sequence: YPEVPPTSI
Position: 327-335
Source molecule (GenBank): Q6J9G0.4
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DDX60L wt
Chemical type: Peptide from protein
Sequence: YVIFDEVHY
Position: 865-873
Source molecule (GenBank): A0A0K1H1B1.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: DDX60L wt
Chemical type: Peptide from protein
Sequence: YVIFDEVHY
Position: 865-873
Source molecule (GenBank): A0A0K1H1B1.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DDX60L wt
Chemical type: Peptide from protein
Sequence: YVIFDEVHY
Position: 865-873
Source molecule (GenBank): A0A0K1H1B1.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: DDX60L wt
Chemical type: Peptide from protein
Sequence: YVIFDEVHY
Position: 865-873
Source molecule (GenBank): A0A0K1H1B1.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DDX60L wt
Chemical type: Peptide from protein
Sequence: YVIFDEVHY
Position: 865-873
Source molecule (GenBank): A0A0K1H1B1.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: USH2A wt
Chemical type: Peptide from protein
Sequence: LIPEIPVEY
Position: 3799-3807
Source molecule (GenBank): O75445.3
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HNRNPUL1 wt
Chemical type: Peptide from protein
Sequence: HAEPGGYSG
Position: 86-94
Source molecule (GenBank): Q9BUJ2.2
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OR51B4 wt
Chemical type: Peptide from protein
Sequence: KLACADITF
Position: 183-191
Source molecule (GenBank): Q9Y5P0.3
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OR51B4 wt
Chemical type: Peptide from protein
Sequence: KLACADITF
Position: 183-191
Source molecule (GenBank): Q9Y5P0.3
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: OR51B4 wt
Chemical type: Peptide from protein
Sequence: KLACADITF
Position: 183-191
Source molecule (GenBank): Q9Y5P0.3
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PATZ1 wt
Chemical type: Peptide from protein
Sequence: RGFSSASAL
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: BCAN wt
Chemical type: Peptide from protein
Sequence: DTVLRYRCR
Position: 837-845
Source molecule (GenBank): Q96GW7.2
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: KPNA1 wt
Chemical type: Peptide from protein
Sequence: QMEKGNQAY
Position: 167-175
Source molecule (GenBank): F2Z3G4.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo