Reference: Ana M Bolivar; Fahriye Duzagac; Nan Deng; Laura Reyes-Uribe; Kyle Chang; Wenhui Wu; Charles M Bowen; Melissa W Taggart; Selvi Thirumurthi; Patrick M Lynch; Y Nancy You; Jesus Rodriguez-Pascual; Steven M Lipkin; Scott Kopetz; Paul Scheet; Gregory A Lizee; Alexandre Reuben; Krishna M Sinha; Eduardo Vilar. "Genomic Landscape of Lynch Syndrome Colorectal Neoplasia Identifies Shared Mutated Neoantigens for Immunoprevention." Gastroenterology (2024).

Epitope: Neo-epitope 1
Chemical type: Peptide, no natural source
Sequence: TARLARTAI
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 2
Chemical type: Peptide, no natural source
Sequence: APRSTPRAT
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 3
Chemical type: Peptide, no natural source
Sequence: SPRRSPAL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 4
Chemical type: Peptide, no natural source
Sequence: GLMTLSKMIK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 5
Chemical type: Peptide, no natural source
Sequence: MTLSKMIKK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 7
Chemical type: Peptide, no natural source
Sequence: FLLALWECSL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 8
Chemical type: Peptide, no natural source
Sequence: TPQDSRQVL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 9
Chemical type: Peptide, no natural source
Sequence: FVMSDTTYK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 10
Chemical type: Peptide, no natural source
Sequence: MSDTTYKIY
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 12
Chemical type: Peptide, no natural source
Sequence: RLSSCVPVA
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 13
Chemical type: Peptide, no natural source
Sequence: SAMTTSSSQK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 14
Chemical type: Peptide, no natural source
Sequence: VPVALMSAM
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 15
Chemical type: Peptide, no natural source
Sequence: FPITPPVW
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 17
Chemical type: Peptide, no natural source
Sequence: TQLARFFPI
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 17
Chemical type: Peptide, no natural source
Sequence: TQLARFFPI
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 18
Chemical type: Peptide, no natural source
Sequence: KMRKKYAQK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 19
Chemical type: Peptide, no natural source
Sequence: NPRRKTWKM
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 20
Chemical type: Peptide, no natural source
Sequence: CSIPTYVKK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 21
Chemical type: Peptide, no natural source
Sequence: SPRTLRCL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 22
Chemical type: Peptide, no natural source
Sequence: LTFFHFFFFFK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 23
Chemical type: Peptide, no natural source
Sequence: SLSAGITDV
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 24
Chemical type: Peptide, no natural source
Sequence: TFFHFFFFF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 26
Chemical type: Peptide, no natural source
Sequence: STRSSGGTL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 27
Chemical type: Peptide, no natural source
Sequence: FMQFSLFSV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 29
Chemical type: Peptide, no natural source
Sequence: APQAASPAM
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 30
Chemical type: Peptide, no natural source
Sequence: CTASASWLLR
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 31
Chemical type: Peptide, no natural source
Sequence: KLLKKVDLK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 32
Chemical type: Peptide, no natural source
Sequence: KSHLGTLRK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 33
Chemical type: Peptide, no natural source
Sequence: FLTKLMVWL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 34
Chemical type: Peptide, no natural source
Sequence: SPGEARAPL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 35
Chemical type: Peptide, no natural source
Sequence: SPRRRDVCTA
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 36
Chemical type: Peptide, no natural source
Sequence: NWMDDSSFLLF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 37
Chemical type: Peptide, no natural source
Sequence: SPSSTSLAV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 38
Chemical type: Peptide, no natural source
Sequence: AMAQVTHPL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 39
Chemical type: Peptide, no natural source
Sequence: GPAGLPLAM
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 40
Chemical type: Peptide, no natural source
Sequence: SLMEQIPHL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 41
Chemical type: Peptide, no natural source
Sequence: FLVSVIFFV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 42
Chemical type: Peptide, no natural source
Sequence: SLVTISRFV
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 43
Chemical type: Peptide, no natural source
Sequence: GMKSSVRLK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 45
Chemical type: Peptide, no natural source
Sequence: VYSGNLLSF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 46
Chemical type: Peptide, no natural source
Sequence: KTLKTLFHLR
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 47
Chemical type: Peptide, no natural source
Sequence: LSSVSFFLY
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 48
Chemical type: Peptide, no natural source
Sequence: KLTETVYST
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 49
Chemical type: Peptide, no natural source
Sequence: STTQQIHSSK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 50
Chemical type: Peptide, no natural source
Sequence: CPLLGKVAW
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 51
Chemical type: Peptide, no natural source
Sequence: SLSLLPQFPL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 52
Chemical type: Peptide, no natural source
Sequence: SLSQEQAWPK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 53
Chemical type: Peptide, no natural source
Sequence: RWIPACLSLI
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 54
Chemical type: Peptide, no natural source
Sequence: SVFQMTFIK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 55
Chemical type: Peptide, no natural source
Sequence: TPSAASYLW
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 56
Chemical type: Peptide, no natural source
Sequence: RVWSFLFLR
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 57
Chemical type: Peptide, no natural source
Sequence: RILNLQVLK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 58
Chemical type: Peptide, no natural source
Sequence: KLVGRAVRRK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 59
Chemical type: Peptide, no natural source
Sequence: SIYTGLSRK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 61
Chemical type: Peptide, no natural source
Sequence: TYWRLIIQNL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 62
Chemical type: Peptide, no natural source
Sequence: LPMSQLLFL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 63
Chemical type: Peptide, no natural source
Sequence: RTNRLFGMK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 64
Chemical type: Peptide, no natural source
Sequence: ESDNLGLLY
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 65
Chemical type: Peptide, no natural source
Sequence: MPAPRAITI
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 66
Chemical type: Peptide, no natural source
Sequence: RVFILLLSDK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 67
Chemical type: Peptide, no natural source
Sequence: VPMMLTILIW
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 68
Chemical type: Peptide, no natural source
Sequence: KYIQVKKLI
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 70
Chemical type: Peptide, no natural source
Sequence: KTGCRGLLGK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 71
Chemical type: Peptide, no natural source
Sequence: WPASRLIFW
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 72
Chemical type: Peptide, no natural source
Sequence: MPSMTDTQM
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 73
Chemical type: Peptide, no natural source
Sequence: WPPLKTLPW
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 75
Chemical type: Peptide, no natural source
Sequence: LPQQISVISF
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 76
Chemical type: Peptide, no natural source
Sequence: PFLSSILLF
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 78
Chemical type: Peptide, no natural source
Sequence: LPASSKSAW
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 79
Chemical type: Peptide, no natural source
Sequence: LPMSPPVSAF
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 81
Chemical type: Peptide, no natural source
Sequence: IYIIILSTL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 82
Chemical type: Peptide, no natural source
Sequence: SYVSPWIIF
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 84
Chemical type: Peptide, no natural source
Sequence: YYICMKERTL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 86
Chemical type: Peptide, no natural source
Sequence: RWWTLVMEW
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 87
Chemical type: Peptide, no natural source
Sequence: SYPSSLSVF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 88
Chemical type: Peptide, no natural source
Sequence: SYLNILPALF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 89
Chemical type: Peptide, no natural source
Sequence: LFMNVQFLF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 90
Chemical type: Peptide, no natural source
Sequence: SYAKISPLW
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 91
Chemical type: Peptide, no natural source
Sequence: QTDILHFLF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 92
Chemical type: Peptide, no natural source
Sequence: RYPSLLEQQI
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 94
Chemical type: Peptide, no natural source
Sequence: FFMATSSHRF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 95
Chemical type: Peptide, no natural source
Sequence: TYPTHFSTW
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 96
Chemical type: Peptide, no natural source
Sequence: HYHFPCFLI
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 97
Chemical type: Peptide, no natural source
Sequence: SYRWLSLFDF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 98
Chemical type: Peptide, no natural source
Sequence: RYPSFPLRL
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 99
Chemical type: Peptide, no natural source
Sequence: LSDANQMLF
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Neo-epitope 100
Chemical type: Peptide, no natural source
Sequence: QTDDHMEIFY
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated