LiteFold/IEDB huggingface dataset:
Reference: Huihao Zhou; Zhao Zha; Yang Liu; Hongtao Zhang; Juanjuan Zhu; Siyi Hu; Guodong Shen; Liansheng Cheng; Liwen Niu; Mark I Greene; Maikun Teng; Jing Liu. "Structural insights into the down-regulation of overexpressed p185(her2/neu) protein of transformed cells by the antibody chA21." The Journal of biological chemistry (2011).

Epitope: Epitope of chA21 scFv on p185(her2/neu)
Chemical type: Discontinuous protein residues
Discontinuous residues: P122, N124, N125, T126, R157, N158, P159, C162, Y163, D165, T166, N187, R188, S189, R190, A191, C192, H193, P194, S196, P197, E207
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive

Epitope: Epitope of chA21 scFv on p185(her2/neu)
Chemical type: Discontinuous protein residues
Discontinuous residues: P122, N124, N125, T126, R157, N158, P159, C162, Y163, D165, T166, N187, R188, S189, R190, A191, C192, H193, P194, S196, P197, E207
Source molecule (GenBank): P04626.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.45
Reference: Harini Krishnamurthy; Eric Gouaux. "X-ray structures of LeuT in substrate-free outward-open and apo inward-open states." Nature (2012).

Epitope: Epitope of Fab 2B12 on Leucine transporter (LeuT)
Chemical type: Discontinuous protein residues
Discontinuous residues: H7, W8, A9, T10, R11, Y68, A71, Q72, Y268, R270, K271, D272, Q273, D274, F427, D430, K431, E434, E435, R438, G439, I441, K443
Source molecule (GenBank): O67854
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab 2B12 on Leucine transporter (LeuT)
Chemical type: Discontinuous protein residues
Discontinuous residues: H7, W8, A9, T10, R11, Y68, A71, Q72, Y268, R270, K271, D272, Q273, D274, F427, D430, K431, E434, E435, R438, G439, I441, K443
Source molecule (GenBank): O67854
Assay category: BCell
Result: Positive
Quantitative measurement: 3.1

Epitope: Epitope of Fab 6A10 on Leucine transporter (LeuT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y68, G70, A71, Q72, G73, H74, G75, L83, R86, G186, I187, S188, I191, E192, T264, Y265, S267, Y268, V269, R270, Q361, I364, A365, E368, D369, K372, L373, S374, R375, F427, K431, E434, E435, R438, R508, E511
Source molecule (GenBank): O67854
Assay category: BCell
Result: Positive
Quantitative measurement: 3.22

Epitope: Epitope of Fab 6A10 on Leucine transporter (LeuT)
Chemical type: Discontinuous protein residues
Discontinuous residues: Y68, G70, A71, Q72, G73, H74, G75, L83, R86, G186, I187, S188, I191, E192, T264, Y265, S267, Y268, V269, R270, Q361, I364, A365, E368, D369, K372, L373, S374, R375, F427, K431, E434, E435, R438, R508, E511
Source molecule (GenBank): O67854
Assay category: BCell
Result: Positive
Reference: Esther Dawen Yu; Enrico Girardi; Jing Wang; Dirk M Zajonc. "Cutting edge: structural basis for the recognition of β-linked glycolipid antigens by invariant NKT cells." Journal of immunology (Baltimore, Md. : 1950) (2011).

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 0.133

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 30900.0

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 19500.0

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 0.0119

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive-Low
Quantitative measurement: 6810.0

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 2.8

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 718.0

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive-Low
Quantitative measurement: 5100.0

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: iGb3
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: iGb3
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.8

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: ßLacCer
Chemical type: Glycolipid
Assay category: TCell
Result: Negative
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: ßLacCer
Chemical type: Glycolipid
Assay category: TCell
Result: Negative
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: ßGlcCer
Chemical type: Glycolipid
Assay category: TCell
Result: Negative
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: ßGlcCer
Chemical type: Glycolipid
Assay category: TCell
Result: Negative
Cell type: NKT cells
Tissue: thymus
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Reha Celikel; Eric C Peterson; S Michael Owens; Kottayil I Varughese. "Crystal structures of a therapeutic single chain antibody in complex with two drugs of abuse-Methamphetamine and 3,4-methylenedioxymethamphetamine." Protein science : a publication of the Protein Society (2009).

Epitope: Methamphetamine (METH)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 1.9
Host: F

Epitope: 3,4-methylenedioxymethamphetamine (MDMA)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 2.4
Host: F
Reference: Katarzyna Domanska; Saskia Vanderhaegen; Vasundara Srinivasan; Els Pardon; Florine Dupeux; Jose A Marquez; Sofia Giorgetti; Monica Stoppini; Lode Wyns; Vittorio Bellotti; Jan Steyaert. "Atomic structure of a nanobody-trapped domain-swapped dimer of an amyloidogenic beta2-microglobulin variant." Proceedings of the National Academy of Sciences of the United States of America (2011).

Epitope: Epitope of Nb24 on ß2m
Chemical type: Region on multi-chain protein
Discontinuous residues: D: L40, K41, N42, G43, E44, R45, E47, K75, D76, E77, R81; E: I92, K94
Source molecule (GenBank): P61769.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.16

Epitope: Epitope of Nb24 on ß2m
Chemical type: Region on multi-chain protein
Discontinuous residues: D: L40, K41, N42, G43, E44, R45, E47, K75, D76, E77, R81; E: I92, K94
Source molecule (GenBank): P61769.1
Assay category: BCell
Result: Positive
Quantitative measurement: 44.0

Epitope: Epitope of Nb24 on ß2m
Chemical type: Region on multi-chain protein
Discontinuous residues: D: L40, K41, N42, G43, E44, R45, E47, K75, D76, E77, R81; E: I92, K94
Source molecule (GenBank): P61769.1
Assay category: BCell
Result: Positive
Reference: Yamei Yu; Jianghai Zhu; Li-Zhi Mi; Thomas Walz; Hao Sun; JianFeng Chen; Timothy A Springer. "Structural specializations of α(4)β(7), an integrin that mediates rolling adhesion." The Journal of cell biology (2012).

Epitope: Epitope of Fab Act-1 on α4ß7 integrin
Chemical type: Discontinuous protein residues
Discontinuous residues: R213, H214, T218, R219, L220, E221, R222, C223, Q224, R248, Q249, S250
Source molecule (GenBank): P26010.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.15

Epitope: Epitope of Fab Act-1 on α4ß7 integrin
Chemical type: Discontinuous protein residues
Discontinuous residues: R213, H214, T218, R219, L220, E221, R222, C223, Q224, R248, Q249, S250
Source molecule (GenBank): P26010.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.1

Epitope: Epitope of Fab Act-1 on α4ß7 integrin
Chemical type: Discontinuous protein residues
Discontinuous residues: R213, H214, T218, R219, L220, E221, R222, C223, Q224, R248, Q249, S250
Source molecule (GenBank): P26010.1
Assay category: BCell
Result: Positive
Reference: Jacinto López-Sagaseta; Leah V Sibener; Jennifer E Kung; Jenny Gumperz; Erin J Adams. "Lysophospholipid presentation by CD1d and recognition by a human Natural Killer T-cell receptor." The EMBO journal (2012).

Epitope: Lysophosphatidylcholine (LPC 18:1)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 3.06

Epitope: Lysophosphatidylcholine (LPC 18:1)
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.8

Epitope: Lysophosphatidylcholine (LPC 18:1)
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 3.06

Epitope: Lysophosphatidylcholine (LPC 18:1)
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 2100.0

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 3600.0

Epitope: α-GalCer
Chemical type: Glycolipid
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 110.0
Reference: Bhuvaneshwari Mahalingam; Kaouther Ajroud; José Luis Alonso; Saurabh Anand; Brian D Adair; Alberto L Horenstein; Fabio Malavasi; Jian-Ping Xiong; M Amin Arnaout. "Stable coordination of the inhibitory Ca2+ ion at the metal ion-dependent adhesion site in integrin CD11b/CD18 by an antibody-derived ligand aspartate: implications for integrin regulation and structure-based drug design." Journal of immunology (Baltimore, Md. : 1950) (2011).

Epitope: Epitope of Fab 107 on CD11bA
Chemical type: Discontinuous protein residues
Discontinuous residues: S158, G159, S160, E194, E195, F196, R197, L221, L222, G223, R224, T225, G259, E260, F262, G263, A290
Source molecule (GenBank): P11215.2
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7

Epitope: Epitope of Fab 107 on CD11bA
Chemical type: Discontinuous protein residues
Discontinuous residues: S158, G159, S160, E194, E195, F196, R197, L221, L222, G223, R224, T225, G259, E260, F262, G263, A290
Source molecule (GenBank): P11215.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.0

Epitope: Epitope of Fab 107 on CD11bA
Chemical type: Discontinuous protein residues
Discontinuous residues: S158, G159, S160, E194, E195, F196, R197, L221, L222, G223, R224, T225, G259, E260, F262, G263, A290
Source molecule (GenBank): P11215.2
Assay category: BCell
Result: Positive
Quantitative measurement: 4.97

Epitope: Epitope of Fab 107 on CD11bA
Chemical type: Discontinuous protein residues
Discontinuous residues: S158, G159, S160, E194, E195, F196, R197, L221, L222, G223, R224, T225, G259, E260, F262, G263, A290
Source molecule (GenBank): P11215.2
Assay category: BCell
Result: Positive
Reference: Young-Jun Park; Tanya Budiarto; Meiting Wu; Els Pardon; Jan Steyaert; Wim G J Hol. "The structure of the C-terminal domain of the largest editosome interaction protein and its role in promoting RNA binding by RNA-editing ligase L2." Nucleic acids research (2012).

Epitope: Epitope of (A1)Nb10 on A1 RNA editosome protein
Chemical type: Discontinuous protein residues
Discontinuous residues: D637, V638, Q639, H640, G641, F642, L643, G644, V648, Q650, Y651, V652, F699, V701, R703, N733, H735, V736, D737, D738, Y746
Source molecule (GenBank): Q95W15
Assay category: BCell
Result: Positive
Quantitative measurement: 1.97

Epitope: Epitope of (A1)Nb10 on A1 RNA editosome protein
Chemical type: Discontinuous protein residues
Discontinuous residues: D637, V638, Q639, H640, G641, F642, L643, G644, V648, Q650, Y651, V652, F699, V701, R703, N733, H735, V736, D737, D738, Y746
Source molecule (GenBank): Q95W15
Assay category: BCell
Result: Positive
Quantitative measurement: 2.76

Epitope: Epitope of (A1)Nb10 on A1 RNA editosome protein
Chemical type: Discontinuous protein residues
Discontinuous residues: D637, V638, Q639, H640, G641, F642, L643, G644, V648, Q650, Y651, V652, F699, V701, R703, N733, H735, V736, D737, D738, Y746
Source molecule (GenBank): Q95W15
Assay category: BCell
Result: Positive

Epitope: Epitope of (A1)Nb10 on A1 RNA editosome protein
Chemical type: Discontinuous protein residues
Discontinuous residues: D637, V638, Q639, H640, G641, F642, L643, G644, V648, Q650, Y651, V652, F699, V701, R703, N733, H735, V736, D737, D738, Y746
Source molecule (GenBank): Q95W15
Assay category: BCell
Result: Positive
Quantitative measurement: 2.65
Reference: Liang Feng; Ernest B Campbell; Roderick MacKinnon. "Molecular mechanism of proton transport in CLC Cl-/H+ exchange transporters." Proceedings of the National Academy of Sciences of the United States of America (2012).

Epitope: Epitope of Fab on CLC Cl-/H+ exchange transporter
Chemical type: Region on multi-chain protein
Discontinuous residues: A: K243, D246, P248, L249, N250, P380, Q381, Y382, H383; B: I231
Source molecule (GenBank): P37019.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.02
Reference: Tomoya Hino; Takatoshi Arakawa; Hiroko Iwanari; Takami Yurugi-Kobayashi; Chiyo Ikeda-Suno; Yoshiko Nakada-Nakura; Osamu Kusano-Arai; Simone Weyand; Tatsuro Shimamura; Norimichi Nomura; Alexander D Cameron; Takuya Kobayashi; Takao Hamakubo; So Iwata; Takeshi Murata. "G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody." Nature (2012).

Epitope: Epitope of Fab2838 on A(2A) Adenosine receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: L33, N34, S35, N36, L37, N39, T41, N42, R102, L110, P217, E219, A221, R222, S223, T224, K227, E228, A231, L235, I292, R293, E294, Q297, T298, K301
Source molecule (GenBank): P29274.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.000116

Epitope: Epitope of Fab2838 on A(2A) Adenosine receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: L33, N34, S35, N36, L37, N39, T41, N42, R102, L110, P217, E219, A221, R222, S223, T224, K227, E228, A231, L235, I292, R293, E294, Q297, T298, K301
Source molecule (GenBank): P29274.2
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7

Epitope: Epitope of Fab2838 on A(2A) Adenosine receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: L33, N34, S35, N36, L37, N39, T41, N42, R102, L110, P217, E219, A221, R222, S223, T224, K227, E228, A231, L235, I292, R293, E294, Q297, T298, K301
Source molecule (GenBank): P29274.2
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab2838 on A(2A) Adenosine receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: L33, N34, S35, N36, L37, N39, T41, N42, R102, L110, P217, E219, A221, R222, S223, T224, K227, E228, A231, L235, I292, R293, E294, Q297, T298, K301
Source molecule (GenBank): P29274.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.1

Epitope: Epitope of Fab2838 on A(2A) Adenosine receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: L33, N34, S35, N36, L37, N39, T41, N42, R102, L110, P217, E219, A221, R222, S223, T224, K227, E228, A231, L235, I292, R293, E294, Q297, T298, K301
Source molecule (GenBank): P29274.2
Assay category: BCell
Result: Positive
Quantitative measurement: 4.4

Epitope: Epitope of Fab2838 on A(2A) Adenosine receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: L33, N34, S35, N36, L37, N39, T41, N42, R102, L110, P217, E219, A221, R222, S223, T224, K227, E228, A231, L235, I292, R293, E294, Q297, T298, K301
Source molecule (GenBank): P29274.2
Assay category: BCell
Result: Positive
Quantitative measurement: 26400.0
Reference: Xia Hong; Jianye Zang; Janice White; Chao Wang; Cheol-Ho Pan; Rui Zhao; Robert C Murphy; Shaodong Dai; Peter Henson; John W Kappler; James Hagman; Gongyi Zhang. "Interaction of JMJD6 with single-stranded RNA." Proceedings of the National Academy of Sciences of the United States of America (2010).

Epitope: Epitope of anti-JMJD6 Fab on human JMJD6
Chemical type: Discontinuous protein residues
Discontinuous residues: Q53, S55, E57, E58, E61, R62, R65, D158, S291, E319, H320, E322, L323, L326
Source molecule (GenBank): Q6NYC1.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7

Epitope: Epitope of anti-JMJD6 Fab on human JMJD6
Chemical type: Discontinuous protein residues
Discontinuous residues: Q53, S55, E57, E58, E61, R62, R65, D158, S291, E319, H320, E322, L323, L326
Source molecule (GenBank): Q6NYC1.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7
Reference: Masamichi Nagae; Suyong Re; Emiko Mihara; Terukazu Nogi; Yuji Sugita; Junichi Takagi. "Crystal structure of α5β1 integrin ectodomain: atomic details of the fibronectin receptor." The Journal of cell biology (2012).

Epitope: Epitope of SG/19 Fab on human α5ß1 integrin
Chemical type: Discontinuous protein residues
Discontinuous residues: N97, R98, S99, K100, G101, T102, A103, E104, K105, E139, D140, N171, R174, R175, I176, T177, S178, S419, I420
Source molecule (GenBank): P05556.2
Assay category: BCell
Result: Positive
Quantitative measurement: 2.9

Epitope: Epitope of SG/19 Fab on human α5ß1 integrin
Chemical type: Discontinuous protein residues
Discontinuous residues: N97, R98, S99, K100, G101, T102, A103, E104, K105, E139, D140, N171, R174, R175, I176, T177, S178, S419, I420
Source molecule (GenBank): P05556.2
Assay category: BCell
Result: Positive
Quantitative measurement: 2.9

Epitope: Epitope of SG/19 Fab on human α5ß1 integrin
Chemical type: Discontinuous protein residues
Discontinuous residues: N97, R98, S99, K100, G101, T102, A103, E104, K105, E139, D140, N171, R174, R175, I176, T177, S178, S419, I420
Source molecule (GenBank): P05556.2
Assay category: BCell
Result: Positive
Reference: Søren G F Rasmussen; Brian T DeVree; Yaozhong Zou; Andrew C Kruse; Ka Young Chung; Tong Sun Kobilka; Foon Sun Thian; Pil Seok Chae; Els Pardon; Diane Calinski; Jesper M Mathiesen; Syed T A Shah; Joseph A Lyons; Martin Caffrey; Samuel H Gellman; Jan Steyaert; Georgios Skiniotis; William I Weis; Roger K Sunahara; Brian K Kobilka. "Crystal structure of the β2 adrenergic receptor-Gs protein complex." Nature (2011).

Epitope: Epitope of nanobody Nb35 on Gαs of the ß2AR-Gs complex
Chemical type: Discontinuous protein residues
Discontinuous residues: R228, D229, E230, R232, I235, T263, N264, Q267, E268, N271, L272, K274, S275, N278, N279, D310, Y311, P313
Source molecule (GenBank): P04896.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.2

Epitope: Epitope of nanobody Nb35 on Gαs of the ß2AR-Gs complex
Chemical type: Discontinuous protein residues
Discontinuous residues: R228, D229, E230, R232, I235, T263, N264, Q267, E268, N271, L272, K274, S275, N278, N279, D310, Y311, P313
Source molecule (GenBank): P04896.1
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody Nb35 on Gß1 of the ß2AR-Gs complex
Chemical type: Discontinuous protein residues
Discontinuous residues: R8, T184, C204, D205, A206, T223, H225, E226, S227, D228, D246, I270
Source molecule (GenBank): P54311.4
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody Nb35 on Gß1 of the ß2AR-Gs complex
Chemical type: Discontinuous protein residues
Discontinuous residues: R8, T184, C204, D205, A206, T223, H225, E226, S227, D228, D246, I270
Source molecule (GenBank): P54311.4
Assay category: BCell
Result: Positive
Quantitative measurement: 3.2
Reference: Andreas Schlundt; Sebastian Günther; Jana Sticht; Marek Wieczorek; Yvette Roske; Udo Heinemann; Christian Freund. "Peptide linkage to the α-subunit of MHCII creates a stably inverted antigen presentation complex." Journal of molecular biology (2012).

Epitope: CLIP 106-120
Chemical type: Peptide from protein
Sequence: KMRMATPLLMQALPM
Position: 106-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.36

Epitope: CLIP 106-120
Chemical type: Peptide from protein
Sequence: KMRMATPLLMQALPM
Position: 106-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.2

Epitope: CLIP 106-120
Chemical type: Peptide from protein
Sequence: KMRMATPLLMQALPM
Position: 106-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive

Epitope: CLIP 106-120
Chemical type: Peptide from protein
Sequence: KMRMATPLLMQALPM
Position: 106-120
Source molecule (GenBank): P04233.3
Assay category: MhcBinding
Result: Positive

Epitope: TT 1147-1159
Chemical type: Peptide from protein
Sequence: DYMYLTNAPSYTN
Position: 1147-1159
Source molecule (GenBank): P04958.2
Assay category: MhcBinding
Result: Positive

Epitope: P4a 293-307
Chemical type: Peptide from protein
Sequence: SMRYQSLIPRLVEFF
Position: 293-307
Source molecule (GenBank): AAB96462.1
Assay category: MhcBinding
Result: Positive
Reference: K J Smith; S W Reid; D I Stuart; A J McMichael; E Y Jones; J I Bell. "An altered position of the alpha 2 helix of MHC class I is revealed by the crystal structure of HLA-B*3501." Immunity (1996).

Epitope: HIV Nef 75-82
Chemical type: Peptide from protein
Sequence: VPLRPMTY
Position: 75-82
Source molecule (GenBank): ACQ72180.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.0
Reference: S W Reid; S McAdam; K J Smith; P Klenerman; C A O'Callaghan; K Harlos; B K Jakobsen; A J McMichael; J I Bell; D I Stuart; E Y Jones. "Antagonist HIV-1 Gag peptides induce structural changes in HLA B8." The Journal of experimental medicine (1996).

Epitope: 7K (Index peptide)
Chemical type: Peptide from protein
Sequence: GGKKKYKL
Position: 24-31
Source molecule (GenBank): BAA00992.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 7K (Index peptide)
Chemical type: Peptide from protein
Sequence: GGKKKYKL
Position: 24-31
Source molecule (GenBank): BAA00992.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.05

Epitope: 7R
Chemical type: Peptide from protein
Sequence: GGKKKYRL
Position: 24-31
Source molecule (GenBank): BAB88540.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 7R
Chemical type: Peptide from protein
Sequence: GGKKKYRL
Position: 24-31
Source molecule (GenBank): BAB88540.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.3

Epitope: 7Q
Chemical type: Peptide from protein
Sequence: GGKKKYQL
Position: 24-31
Source molecule (GenBank): BAB88551.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 7Q
Chemical type: Peptide from protein
Sequence: GGKKKYQL
Position: 24-31
Source molecule (GenBank): BAB88551.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.1

Epitope: 5R
Chemical type: Peptide from protein
Sequence: GGKKRYKL
Position: 24-31
Source molecule (GenBank): ABI20203.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 5R
Chemical type: Peptide from protein
Sequence: GGKKRYKL
Position: 24-31
Source molecule (GenBank): ABI20203.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.2

Epitope: 3R
Chemical type: Peptide from protein
Sequence: GGRKKYKL
Position: 24-31
Source molecule (GenBank): AAV53168.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 3R
Chemical type: Peptide from protein
Sequence: GGRKKYKL
Position: 24-31
Source molecule (GenBank): AAV53168.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.2
Reference: A Achour; K Persson; R A Harris; J Sundbäck; C L Sentman; Y Lindqvist; G Schneider; K Kärre. "The crystal structure of H-2Dd MHC class I complexed with the HIV-1-derived peptide P18-I10 at 2.4 A resolution: implications for T cell and NK cell recognition." Immunity (1998).

Epitope: P18-I10 peptide
Chemical type: Peptide from protein
Sequence: RGPGRAFVTI
Position: 311-320
Source molecule (GenBank): P03375.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.4