LiteFold/IEDB huggingface dataset:
Reference: Dennis V Pedersen; Trine A F Gadeberg; Caroline Thomas; Yong Wang; Nicolas Joram; Rasmus K Jensen; Sofia M M Mazarakis; Margot Revel; Carine El Sissy; Steen V Petersen; Kresten Lindorff-Larsen; Steffen Thiel; Nick S Laursen; Véronique Fremeaux-Bacchi; Gregers R Andersen. "Structural Basis for Properdin Oligomerization and Convertase Stimulation in the Human Complement System." Frontiers in immunology (2019).

Epitope: Epitope of hFPNb1 on properdin (FP)
Chemical type: Discontinuous protein residues
Discontinuous residues: S267, P268, P270, V271, L275, G276, Q277, M279, Q281, T301, T303
Source molecule (GenBank): P27918.2
Assay category: BCell
Result: Positive
Quantitative measurement: 6.15

Epitope: Epitope of hFPNb1 on properdin (FP)
Chemical type: Discontinuous protein residues
Discontinuous residues: S267, P268, P270, V271, L275, G276, Q277, M279, Q281, T301, T303
Source molecule (GenBank): P27918.2
Assay category: BCell
Result: Positive
Quantitative measurement: 7.3

Epitope: Epitope of hFPNb1 on properdin (FP)
Chemical type: Discontinuous protein residues
Discontinuous residues: S267, P268, P270, V271, L275, G276, Q277, M279, Q281, T301, T303
Source molecule (GenBank): P27918.2
Assay category: BCell
Result: Negative
Reference: Nicolas Bery; Laura Keller; Marjorie Soulié; Rémi Gence; Anne-Laure Iscache; Julia Cherier; Stéphanie Cabantous; Olivier Sordet; Isabelle Lajoie-Mazenc; Jean-Denis Pedelacq; Gilles Favre; Aurélien Olichon. "A Targeted Protein Degradation Cell-Based Screening for Nanobodies Selective toward the Cellular RHOB GTP-Bound Conformation." Cell chemical biology (2019).

Epitope: Epitope of Fab on RHOB-GTP
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, A15, C16, V33, Y34, P36, S85, D87, S88, K118, H126, V127, E130, L131, R133, M134
Source molecule (GenBank): P62745.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.5

Epitope: Epitope of Fab on RHOB-GTP
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, A15, C16, V33, Y34, P36, S85, D87, S88, K118, H126, V127, E130, L131, R133, M134
Source molecule (GenBank): P62745.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab on RHOB-GTP
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, A15, C16, V33, Y34, P36, S85, D87, S88, K118, H126, V127, E130, L131, R133, M134
Source molecule (GenBank): P62745.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab on RHOB-GTP
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, A15, C16, V33, Y34, P36, S85, D87, S88, K118, H126, V127, E130, L131, R133, M134
Source molecule (GenBank): P62745.1
Assay category: BCell
Result: Positive
Reference: Stefano Pernigo; Magda S Chegkazi; Yan Y Yip; Conor Treacy; Giulia Glorani; Kjetil Hansen; Argyris Politis; Soi Bui; Mark P Dodding; Roberto A Steiner. "Structural basis for isoform-specific kinesin-1 recognition of Y-acidic cargo adaptors." eLife (2018).

Epitope: Epitope of nanobody on kinesin light chain-1
Chemical type: Discontinuous protein residues
Discontinuous residues: D334, E359, Y360, Q363, R364, L366, G367, Q370, T371, P375, K384, L387, Y391, Q399, T402, L403, E406, R410
Source molecule (GenBank): Q5UE59
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7

Epitope: Epitope of nanobody on kinesin light chain-1
Chemical type: Discontinuous protein residues
Discontinuous residues: D334, E359, Y360, Q363, R364, L366, G367, Q370, T371, P375, K384, L387, Y391, Q399, T402, L403, E406, R410
Source molecule (GenBank): Q5UE59
Assay category: BCell
Result: Positive
Quantitative measurement: 2.29
Reference: Diana Darowski; Christian Jost; Kay Stubenrauch; Uwe Wessels; Jörg Benz; Andreas Ehler; Anne Freimoser-Grundschober; Peter Brünker; Ekkehard Mössner; Pablo Umaña; Sebastian Kobold; Christian Klein. "P329G-CAR-J: a novel Jurkat-NFAT-based CAR-T reporter system recognizing the P329G Fc mutation." Protein engineering, design & selection : PEDS (2019).

Epitope: Epitope of anti-P329G LALA on a P329G LALA Fc fragment
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, G15, P16, S45, H46, E47, D48, P49, E50, K100, N103, K104, A105, L106, G107, A108, P109
Source molecule (GenBank): 6S5A_D
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0112

Epitope: Epitope of anti-P329G LALA on a P329G LALA Fc fragment
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, G15, P16, S45, H46, E47, D48, P49, E50, K100, N103, K104, A105, L106, G107, A108, P109
Source molecule (GenBank): 6S5A_D
Assay category: BCell
Result: Positive
Quantitative measurement: 1.72

Epitope: Epitope of anti-P329G LALA on a P329G LALA Fc fragment
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, G15, P16, S45, H46, E47, D48, P49, E50, K100, N103, K104, A105, L106, G107, A108, P109
Source molecule (GenBank): 6S5A_D
Assay category: BCell
Result: Positive
Quantitative measurement: 15.0

Epitope: Epitope of anti-P329G LALA on a P329G LALA Fc fragment
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, G15, P16, S45, H46, E47, D48, P49, E50, K100, N103, K104, A105, L106, G107, A108, P109
Source molecule (GenBank): 6S5A_D
Assay category: BCell
Result: Positive

Epitope: Epitope of anti-P329G LALA on a P329G LALA Fc fragment
Chemical type: Discontinuous protein residues
Discontinuous residues: G14, G15, P16, S45, H46, E47, D48, P49, E50, K100, N103, K104, A105, L106, G107, A108, P109
Source molecule (GenBank): 6S5A_D
Assay category: BCell
Result: Positive
Quantitative measurement: 817000.0
Reference: Haitian Fan; Alexander P Walker; Loïc Carrique; Jeremy R Keown; Itziar Serna Martin; Dimple Karia; Jane Sharps; Narin Hengrung; Els Pardon; Jan Steyaert; Jonathan M Grimes; Ervin Fodor. "Structures of influenza A virus RNA polymerase offer insight into viral genome replication." Nature (2019).

Epitope: Epitope of nanobody Nb8205 on Flu Pol A
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E427, I428, G429, E430, D431, Y437, S440, R443, N444, Y445, K492, E493, E613; B: Q545, R563, D565, Q567, W580, A587, P596
Source molecule (GenBank): P03434.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.34

Epitope: Epitope of nanobody Nb8205 on Flu Pol A
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E427, I428, G429, E430, D431, Y437, S440, R443, N444, Y445, K492, E493, E613; B: Q545, R563, D565, Q567, W580, A587, P596
Source molecule (GenBank): P03434.1
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody Nb8205 on Flu Pol A
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E427, I428, G429, E430, D431, Y437, S440, R443, N444, Y445, K492, E493, E613; B: Q545, R563, D565, Q567, W580, A587, P596
Source molecule (GenBank): P03434.1
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody Nb8205 on Flu Pol A
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E427, I428, G429, E430, D431, Y437, S440, R443, N444, Y445, K492, E493, E613; B: Q545, R563, D565, Q567, W580, A587, P596
Source molecule (GenBank): P03434.1
Assay category: BCell
Result: Positive
Reference: Anant Gharpure; Jinfeng Teng; Yuxuan Zhuang; Colleen M Noviello; Richard M Walsh; Rico Cabuco; Rebecca J Howard; Nurulain T Zaveri; Erik Lindahl; Ryan E Hibbs. "Agonist Selectivity and Ion Permeation in the α3β4 Ganglionic Nicotinic Receptor." Neuron (2019).

Epitope: Epitope of 4G9 Fab on α3ß4 ganglionic nicotinic receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: R37, E40, R41, L42, E44, A54, N55, K95, K97, W98, N99, D102, Y103, Y143
Source molecule (GenBank): P32297.4
Assay category: BCell
Result: Positive

Epitope: Epitope of 4G9 Fab on α3ß4 ganglionic nicotinic receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: R37, E40, R41, L42, E44, A54, N55, K95, K97, W98, N99, D102, Y103, Y143
Source molecule (GenBank): P32297.4
Assay category: BCell
Result: Positive-Low

Epitope: Epitope of 4G9 Fab on α3ß4 ganglionic nicotinic receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: R37, E40, R41, L42, E44, A54, N55, K95, K97, W98, N99, D102, Y103, Y143
Source molecule (GenBank): P32297.4
Assay category: BCell
Result: Positive
Reference: Woori Shin; Hyun Tae Lee; Heejin Lim; Sang Hyung Lee; Ji Young Son; Jee Un Lee; Ki-Young Yoo; Seong Eon Ryu; Jaejun Rhie; Ju Yeon Lee; Yong-Seok Heo. "BAFF-neutralizing interaction of belimumab related to its therapeutic efficacy for treating systemic lupus erythematosus." Nature communications (2018).

Epitope: Epitope of belimumab on BAFF
Chemical type: Discontinuous protein residues
Discontinuous residues: G161, S162, Y163, T205, Y206, M208, G209, K215, G221, D222, L224, S225, L226, R231, I233, P264, R265, E266
Source molecule (GenBank): Q9Y275.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.05

Epitope: Epitope of belimumab on BAFF
Chemical type: Discontinuous protein residues
Discontinuous residues: G161, S162, Y163, T205, Y206, M208, G209, K215, G221, D222, L224, S225, L226, R231, I233, P264, R265, E266
Source molecule (GenBank): Q9Y275.1
Assay category: BCell
Result: Positive

Epitope: Epitope of belimumab on BAFF
Chemical type: Discontinuous protein residues
Discontinuous residues: G161, S162, Y163, T205, Y206, M208, G209, K215, G221, D222, L224, S225, L226, R231, I233, P264, R265, E266
Source molecule (GenBank): Q9Y275.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.995

Epitope: Epitope of belimumab on BAFF
Chemical type: Discontinuous protein residues
Discontinuous residues: G161, S162, Y163, T205, Y206, M208, G209, K215, G221, D222, L224, S225, L226, R231, I233, P264, R265, E266
Source molecule (GenBank): Q9Y275.1
Assay category: BCell
Result: Positive
Quantitative measurement: 100100.0

Epitope: Epitope of belimumab on BAFF
Chemical type: Discontinuous protein residues
Discontinuous residues: G161, S162, Y163, T205, Y206, M208, G209, K215, G221, D222, L224, S225, L226, R231, I233, P264, R265, E266
Source molecule (GenBank): Q9Y275.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00009962
Reference: Iris A Bermejo; Imanol Usabiaga; Ismael Compañón; Jorge Castro-López; Aran Insausti; José A Fernández; Alberto Avenoza; Jesús H Busto; Jesús Jiménez-Barbero; Juan L Asensio; Jesús M Peregrina; Gonzalo Jiménez-Osés; Ramón Hurtado-Guerrero; Emilio J Cocinero; Francisco Corzana. "Water Sculpts the Distinctive Shapes and Dynamics of the Tumor-Associated Carbohydrate Tn Antigens: Implications for Their Molecular Recognition." Journal of the American Chemical Society (2018).

Epitope: Epitope of scFv SM3 on Mucin-1 peptide
Chemical type: Peptide from protein
Sequence: APDTRP
Position: 141-146
Source molecule (GenBank): P15941.3
Assay category: BCell
Result: Positive
Quantitative measurement: 1.8
Host: F

Epitope: Epitope of scFv SM3 on Mucin-1 peptide
Chemical type: Peptide from protein
Sequence: APDTRP
Position: 141-146
Source molecule (GenBank): P15941.3
Assay category: BCell
Result: Positive
Quantitative measurement: 1.7
Host: F
Reference: Timo Vögtle; Sumana Sharma; Jun Mori; Zoltan Nagy; Daniela Semeniak; Cyril Scandola; Mitchell J Geer; Christopher W Smith; Jordan Lane; Scott Pollack; Riitta Lassila; Annukka Jouppila; Alastair J Barr; Derek J Ogg; Tina D Howard; Helen J McMiken; Juli Warwicker; Catherine Geh; Rachel Rowlinson; W Mark Abbott; Anita Eckly; Harald Schulze; Gavin J Wright; Alexandra Mazharian; Klaus Fütterer; Sundaresan Rajesh; Michael R Douglas; Yotis A Senis. "Heparan sulfates are critical regulators of the inhibitory megakaryocyte-platelet receptor G6b-B." eLife (2019).

Epitope: Epitope of 17-4 Fab on G6b-B ectodomain
Chemical type: Discontinuous protein residues
Discontinuous residues: G20, A21, S22, L23, D24, G25, R26, D29, V31, H121, V122, L123, G124, D125
Source molecule (GenBank): O95866.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.13

Epitope: Epitope of 17-4 Fab on G6b-B ectodomain
Chemical type: Discontinuous protein residues
Discontinuous residues: G20, A21, S22, L23, D24, G25, R26, D29, V31, H121, V122, L123, G124, D125
Source molecule (GenBank): O95866.1
Assay category: BCell
Result: Positive
Reference: Dries Van Hemelen; Wolfgang Hemmer; Maximilian Kmenta; Uwe B Berger; Tamar Kinaciyan; Barbara Bohle; Beatrice Jahn-Schmid. "Dramatically decreased T cell responses but persistent IgE upon reduced pollen exposure." Immunobiology (2019).

Epitope: Art v 1 25-36
Chemical type: Peptide from protein
Sequence: KCIEWEKAQHGA
Position: 49-60
Source molecule (GenBank): Q84ZX5.1
Assay category: TCell
Result: Positive
Host:  11-71 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Art v 1 19-36
Chemical type: Peptide from protein
Sequence: NKKCDKKCIEWEKAQHGA
Position: 43-60
Source molecule (GenBank): Q84ZX5.1
Assay category: TCell
Result: Positive
Host:  11-71 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Jingyi Hong; Xiaojun Xiao; Qichan Gao; Shanshan Li; Bei Jiang; Xizhuo Sun; Pixin Ran; Pingchang Yang. "Co-delivery of allergen epitope fragments and R848 inhibits food allergy by inducing tolerogenic dendritic cells and regulatory T cells." International journal of nanomedicine (2019).

Epitope: OVA 33-47 peptide IK
Chemical type: Peptide from protein
Sequence: IAIMSALAMVYLGAK
Position: 33-47
Source molecule (GenBank): P01012.2
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: OVA 33-47 peptide IK
Chemical type: Peptide from protein
Sequence: IAIMSALAMVYLGAK
Position: 33-47
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Host: F 6 weeks

Epitope: OVA 33-47 peptide IK
Chemical type: Peptide from protein
Sequence: IAIMSALAMVYLGAK
Position: 33-47
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: lymphocyte
Tissue: gastrointestinal tract
Culture conditions: Direct Ex Vivo
Reference: Jing-Jing Xu; Ji-Qiang Wu; Xue-Fei Cheng; Wu Tong; Hao Zheng; Hao-Jie Zhu; Yu-Ting Liu; Yi-Feng Jiang; Fei Gao; Hai Yu; Tong-Ling Shan; Guo-Xin Li; Guang-Zhi Tong. "Identification of two novel epitopes targeting glycoprotein E of pseudorabies virus using monoclonal antibodies." Biochemical and biophysical research communications (2019).

Epitope: PRV gE 161-165
Chemical type: Peptide from protein
Sequence: RLRRE
Position: 161-165
Source molecule (GenBank): AKP23873.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: PRV gE 161-165
Chemical type: Peptide from protein
Sequence: RLRRE
Position: 161-165
Source molecule (GenBank): AKP23873.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: PRV gE 161-165
Chemical type: Peptide from protein
Sequence: RLRRE
Position: 161-165
Source molecule (GenBank): AKP23873.1
Assay category: BCell
Result: Positive
Host: F 4 weeks
Reference: Michael D Keller; Sam Darko; Haili Lang; Amy Ransier; Christopher A Lazarski; Yunfei Wang; Patrick J Hanley; Blachy J Davila; Jennifer R Heimall; Richard F Ambinder; A John Barrett; Cliona M Rooney; Helen E Heslop; Daniel C Douek; Catherine M Bollard. "T-cell receptor sequencing demonstrates persistence of virus-specific T cells after antiviral immunotherapy." British journal of haematology (2019).

Epitope: CMV-pp65/NLV
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood

Epitope: CMV-pp65/QYD
Chemical type: Peptide from protein
Sequence: QYDPVAALF
Position: 341-349
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood

Epitope: CMV-pp65/YSE
Chemical type: Peptide from protein
Sequence: YSEHPTFTSQY
Position: 363-373
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood

Epitope: CMV-pp65/TPR
Chemical type: Peptide from protein
Sequence: TPRVTGGGAM
Position: 417-426
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood

Epitope: EBV-EBNA1/HPV
Chemical type: Peptide from protein
Sequence: HPVAEADYFEY
Position: 407-417
Source molecule (GenBank): CEQ34105.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Reference: Maude Cloutier; Emmanilo Delar; Kevin Muru; Seynabou Ndong; Robert R Hoyeck; Taniya Kaewarpai; Narisara Chantratita; Mary N Burtnick; Paul J Brett; Charles Gauthier. "Melioidosis patient serum-reactive synthetic tetrasaccharides bearing the predominant epitopes of Burkholderia pseudomallei and Burkholderia mallei O-antigens." Organic & biomolecular chemistry (2019).

Epitope: Oligosaccharide Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 1
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 3
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 3
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 4
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 4
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 5
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 5
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 6
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 6
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 6
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 6
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 7
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 7
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 8
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-High

Epitope: Oligosaccharide Compound 8
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 9
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Oligosaccharide Compound 9
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Oligosaccharide Compound 9
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-High

Epitope: Oligosaccharide Compound 9
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Reference: G J J Kierkels; W Scheper; A D Meringa; I Johanna; D X Beringer; A Janssen; M Schiffler; T Aarts-Riemens; L Kramer; T Straetemans; S Heijhuurs; J H W Leusen; E San José; K Fuchs; M Griffioen; J H Falkenburg; L Bongiovanni; A de Bruin; D Vargas-Diaz; M Altelaar; A J R Heck; L D Shultz; F Ishikawa; M I Nishimura; Z Sebestyén; J Kuball. "Identification of a tumor-specific allo-HLA-restricted γδTCR." Blood advances (2019).

Epitope: Nef 134-10
Chemical type: Peptide from protein
Sequence: RYPLTFGWCF
Position: 134-143
Source molecule (GenBank): Q9YYU8.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Engineered

Epitope: Nef 134-10
Chemical type: Peptide from protein
Sequence: RYPLTFGWCF
Position: 134-143
Source molecule (GenBank): Q9YYU8.1
Assay category: MhcBinding
Result: Positive

Epitope: CMV (341-349)
Chemical type: Peptide from protein
Sequence: QYDPVAALF
Position: 341-349
Source molecule (GenBank): AKI20001.1
Assay category: MhcBinding
Result: Positive
Reference: Yukinari Kato; Junko Takei; Yoshikazu Furusawa; Yusuke Sayama; Masato Sano; Satoru Konnai; Atsushi Kobayashi; Hiroyuki Harada; Maki Takahashi; Hiroyoshi Suzuki; Shinji Yamada; Mika K Kaneko. "Epitope Mapping of Anti-Bear Podoplanin Monoclonal Antibody PMab-247." Monoclonal antibodies in immunodiagnosis and immunotherapy (2019).

Epitope: PMab-247 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D76, R78, E80, R82
Source molecule (GenBank): XP_008692925.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PMab-247 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D76, R78, E80, R82
Source molecule (GenBank): XP_008692925.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PMab-247 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D76, R78, E80, R82
Source molecule (GenBank): XP_008692925.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Jingjing Ling; Ross W Cheloha; Nicholas McCaul; Zhen-Yu J Sun; Gerhard Wagner; Hidde L Ploegh. "A nanobody that recognizes a 14-residue peptide epitope in the E2 ubiquitin-conjugating enzyme UBC6e modulates its activity." Molecular immunology (2019).

Epitope: Epitope of VHH05 on UBC6e
Chemical type: Peptide from protein
Sequence: QADQEAKELARQIS
Position: 171-184
Source molecule (GenBank): Q9Y385.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.15

Epitope: Epitope of VHH05 on UBC6e
Chemical type: Peptide from protein
Sequence: QADQEAKELARQIS
Position: 171-184
Source molecule (GenBank): Q9Y385.2
Assay category: BCell
Result: Positive

Epitope: Epitope of VHH05 on UBC6e
Chemical type: Peptide from protein
Sequence: QADQEAKELARQIS
Position: 171-184
Source molecule (GenBank): Q9Y385.2
Assay category: BCell
Result: Positive
Quantitative measurement: 5.0

Epitope: Epitope of VHH05 on UBC6e
Chemical type: Peptide from protein
Sequence: QADQEAKELARQIS
Position: 171-184
Source molecule (GenBank): Q9Y385.2
Assay category: BCell
Result: Positive

Epitope: Epitope of VHH05 on UBC6e
Chemical type: Peptide from protein
Sequence: QADQEAKELARQIS
Position: 171-184
Source molecule (GenBank): Q9Y385.2
Assay category: BCell
Result: Positive
Reference: Shinji Yamada; Shunsuke Itai; Yoshikazu Furusawa; Mika K Kaneko; Yukinari Kato. "Epitope Mapping of Antipig Podoplanin Monoclonal Antibody PMab-213." Monoclonal antibodies in immunodiagnosis and immunotherapy (2019).

Epitope: PMab-213 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: P53, R54, R56, Y60
Source molecule (GenBank): XP_005665074.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PMab-213 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: P53, R54, R56, Y60
Source molecule (GenBank): XP_005665074.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PMab-213 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: P53, R54, R56, Y60
Source molecule (GenBank): XP_005665074.1
Assay category: BCell
Result: Positive
Host: F 6 weeks