Reference: Jieru Deng; Chunni Lu; Chuanxin Liu; Sara Oveissi; W Douglas Fairlie; Erinna F Lee; Pamuk Bilsel; Hamsa Puthalakath; Weisan Chen. "Influenza A virus infection-induced macroautophagy facilitates MHC class II-restricted endogenous presentation of an immunodominant viral epitope." The FEBS journal (2021).

Epitope: HA 211-225
Chemical type: Peptide from protein
Sequence: YVQASGRVTVSTRRS
Position: 211-225
Source molecule (GenBank): P03438.2
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD4+
Tissue: bronchial aveolar lavage (BAL)
Culture conditions: Direct Ex Vivo

Epitope: HA 261-175
Chemical type: Peptide from protein
Sequence: INSNGNLIAPRGYFK
Position: 261-275
Source molecule (GenBank): P03438.2
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 276-290
Chemical type: Peptide from protein
Sequence: MRTGKSSIMRSDAPI
Position: 276-290
Source molecule (GenBank): P03438.2
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 326-340
Chemical type: Peptide from protein
Sequence: KQNTLKLATGMRNVP
Position: 326-340
Source molecule (GenBank): P03438.2
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 91-105
Chemical type: Peptide from protein
Sequence: KTGGPIYRRVNGKWM
Position: 91-105
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 136-150
Chemical type: Peptide from protein
Sequence: MMIWHSNLNDATYQR
Position: 136-150
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 146-160
Chemical type: Peptide from protein
Sequence: ATYQRTRALVRTGMD
Position: 146-160
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 201-215
Chemical type: Peptide from protein
Sequence: INDRNFWRGENGRKT
Position: 201-215
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 211-225
Chemical type: Peptide from protein
Sequence: NGRKTRIAYERMCNI
Position: 211-225
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 276-290
Chemical type: Peptide from protein
Sequence: LPACVYGPAVASGYD
Position: 276-290
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 311-325
Chemical type: Peptide from protein
Sequence: QVYSLIRPNENPAHK
Position: 311-325
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive-High
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: NP 311-325
Chemical type: Peptide from protein
Sequence: QVYSLIRPNENPAHK
Position: 311-325
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: NP 311-325
Chemical type: Peptide from protein
Sequence: QVYSLIRPNENPAHK
Position: 311-325
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: PB2 91-105
Chemical type: Peptide from protein
Sequence: VSPLAVTWWNRNGPM
Position: 91-105
Source molecule (GenBank): BAA99403.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: PB2 106-120
Chemical type: Peptide from protein
Sequence: TNTVHYPKIYKTYFE
Position: 106-120
Source molecule (GenBank): BAA99403.1
Assay category: TCell
Result: Positive-Intermediate
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: PB2 106-120
Chemical type: Peptide from protein
Sequence: TNTVHYPKIYKTYFE
Position: 106-120
Source molecule (GenBank): BAA99403.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: PA 316-330
Chemical type: Peptide from protein
Sequence: GWKEPNVVKPHEKGI
Position: 316-330
Source molecule (GenBank): BAA99401.1
Assay category: TCell
Result: Positive-Intermediate
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: PA 456-470
Chemical type: Peptide from protein
Sequence: RATEYIMKGVYINTA
Position: 454-468
Source molecule (GenBank): BAA99401.1
Assay category: TCell
Result: Positive-Intermediate
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: PA 224-233
Chemical type: Peptide from protein
Sequence: SSLENFRAYV
Position: 224-233
Source molecule (GenBank): BAA99401.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: bronchial aveolar lavage (BAL)
Culture conditions: Direct Ex Vivo

Epitope: PB1F2 62-70
Chemical type: Peptide from protein
Sequence: LSLRNPILV
Position: 62-70
Source molecule (GenBank): P0C0U1.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: bronchial aveolar lavage (BAL)
Culture conditions: Direct Ex Vivo

Epitope: PB1 703-711
Chemical type: Peptide from protein
Sequence: SSYRRPVGI
Position: 703-711
Source molecule (GenBank): BAA99402.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: bronchial aveolar lavage (BAL)
Culture conditions: Direct Ex Vivo

Epitope: NP 366-374
Chemical type: Peptide from protein
Sequence: ASNENMETM
Position: 366-374
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: NP 366-374
Chemical type: Peptide from protein
Sequence: ASNENMETM
Position: 366-374
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Cell Line / Clone

Epitope: NP 43-60
Chemical type: Peptide from protein
Sequence: MCTELKLSDYEGRLIQNS
Position: 43-60
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 49-66
Chemical type: Peptide from protein
Sequence: LSDYEGRLIQNSLTIERM
Position: 49-66
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 55-72
Chemical type: Peptide from protein
Sequence: RLIQNSLTIERMVLSAFD
Position: 55-72
Source molecule (GenBank): BAA99400.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 13-30
Chemical type: Peptide from protein
Sequence: AAADADTICIGYHANNST
Position: 13-30
Source molecule (GenBank): AAM75158.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 19-36
Chemical type: Peptide from protein
Sequence: TICIGYHANNSTDTVDTV
Position: 19-36
Source molecule (GenBank): AAM75158.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NA 25-42
Chemical type: Peptide from protein
Sequence: QIGNIISIWISHSIQTGS
Position: 25-42
Source molecule (GenBank): NP_775534.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo