Reference: Juan L Mendoza; Suzanne Fischer; Marvin H Gee; Lilian H Lam; Simon Brackenridge; Fiona M Powrie; Michael Birnbaum; Andrew J McMichael; K Christopher Garcia; Geraldine M Gillespie. "Interrogating the recognition landscape of a conserved HIV-specific TCR reveals distinct bacterial peptide cross-reactivity." eLife (2020).

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: TCell
Result: Positive

Epitope: KF11
Chemical type: Peptide from protein
Sequence: KAFSPEVIPMF
Position: 49-59
Source molecule (GenBank): Q70A36.1
Assay category: MhcBinding
Result: Positive

Epitope: Mic1/HdH1
Chemical type: Peptide from protein
Sequence: LTISPEIPPYF
Position: 164-174
Source molecule (GenBank): WP_009497850.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic1/HdH1
Chemical type: Peptide from protein
Sequence: LTISPEIPPYF
Position: 164-174
Source molecule (GenBank): WP_009497850.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic1/HdH1
Chemical type: Peptide from protein
Sequence: LTISPEIPPYF
Position: 164-174
Source molecule (GenBank): WP_009497850.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic1/HdH1
Chemical type: Peptide from protein
Sequence: LTISPEIPPYF
Position: 164-174
Source molecule (GenBank): WP_009497850.1
Assay category: MhcBinding
Result: Positive

Epitope: Lib1
Chemical type: Peptide, no natural source
Sequence: GTIRPEIPDYF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Lib1
Chemical type: Peptide, no natural source
Sequence: GTIRPEIPDYF
Assay category: TCell
Result: Positive

Epitope: Lib1
Chemical type: Peptide, no natural source
Sequence: GTIRPEIPDYF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Lib1
Chemical type: Peptide, no natural source
Sequence: GTIRPEIPDYF
Assay category: MhcBinding
Result: Positive

Epitope: Mic2
Chemical type: Peptide from protein
Sequence: GSLSPELRPIF
Position: 203-213
Source molecule (GenBank): XP_003866359.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic2
Chemical type: Peptide from protein
Sequence: GSLSPELRPIF
Position: 203-213
Source molecule (GenBank): XP_003866359.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic2
Chemical type: Peptide from protein
Sequence: GSLSPELRPIF
Position: 203-213
Source molecule (GenBank): XP_003866359.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic2
Chemical type: Peptide from protein
Sequence: GSLSPELRPIF
Position: 203-213
Source molecule (GenBank): XP_003866359.1
Assay category: MhcBinding
Result: Positive

Epitope: Lib2
Chemical type: Peptide, no natural source
Sequence: LSGSPELRMIF
Assay category: TCell
Result: Positive

Epitope: Lib2
Chemical type: Peptide, no natural source
Sequence: LSGSPELRMIF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Lib2
Chemical type: Peptide, no natural source
Sequence: LSGSPELRMIF
Assay category: MhcBinding
Result: Positive

Epitope: Lib3
Chemical type: Peptide, no natural source
Sequence: KSLTPEVRGYW
Assay category: TCell
Result: Positive

Epitope: Lib3
Chemical type: Peptide, no natural source
Sequence: KSLTPEVRGYW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Lib3
Chemical type: Peptide, no natural source
Sequence: KSLTPEVRGYW
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Lib3
Chemical type: Peptide, no natural source
Sequence: KSLTPEVRGYW
Assay category: MhcBinding
Result: Positive

Epitope: Mic3
Chemical type: Peptide from protein
Sequence: RSLAPEVRGYW
Position: 737-747
Source molecule (GenBank): WP_013251565.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic3
Chemical type: Peptide from protein
Sequence: RSLAPEVRGYW
Position: 737-747
Source molecule (GenBank): WP_013251565.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic3
Chemical type: Peptide from protein
Sequence: RSLAPEVRGYW
Position: 737-747
Source molecule (GenBank): WP_013251565.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Mic3
Chemical type: Peptide from protein
Sequence: RSLAPEVRGYW
Position: 737-747
Source molecule (GenBank): WP_013251565.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH2
Chemical type: Peptide from protein
Sequence: LTISPEIPSYF
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH2
Chemical type: Peptide from protein
Sequence: LTISPEIPSYF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH2
Chemical type: Peptide from protein
Sequence: LTISPEIPSYF
Assay category: MhcBinding
Result: Positive

Epitope: HdH3
Chemical type: Peptide from protein
Sequence: LTITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_035198159.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH3
Chemical type: Peptide from protein
Sequence: LTITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_035198159.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH3
Chemical type: Peptide from protein
Sequence: LTITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_035198159.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH4
Chemical type: Peptide from protein
Sequence: LTITPEIRPYF
Position: 164-174
Source molecule (GenBank): WP_053401343.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH4
Chemical type: Peptide from protein
Sequence: LTITPEIRPYF
Position: 164-174
Source molecule (GenBank): WP_053401343.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH4
Chemical type: Peptide from protein
Sequence: LTITPEIRPYF
Position: 164-174
Source molecule (GenBank): WP_053401343.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH5
Chemical type: Peptide from protein
Sequence: LTISEELPPYF
Position: 1221-1231
Source molecule (GenBank): WP_019505727.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH5
Chemical type: Peptide from protein
Sequence: LTISEELPPYF
Position: 1221-1231
Source molecule (GenBank): WP_019505727.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH6
Chemical type: Peptide from protein
Sequence: LEISPELPPYF
Position: 164-174
Source molecule (GenBank): WP_042530015.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH6
Chemical type: Peptide from protein
Sequence: LEISPELPPYF
Position: 164-174
Source molecule (GenBank): WP_042530015.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH7
Chemical type: Peptide from protein
Sequence: LSITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_035343434.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH7
Chemical type: Peptide from protein
Sequence: LSITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_035343434.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH7
Chemical type: Peptide from protein
Sequence: LSITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_035343434.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH8
Chemical type: Peptide from protein
Sequence: LSITPEISPYF
Position: 165-175
Source molecule (GenBank): WP_016203640.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH8
Chemical type: Peptide from protein
Sequence: LSITPEISPYF
Position: 165-175
Source molecule (GenBank): WP_016203640.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH8
Chemical type: Peptide from protein
Sequence: LSITPEISPYF
Position: 165-175
Source molecule (GenBank): WP_016203640.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH9
Chemical type: Peptide from protein
Sequence: LAITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_126409792.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH9
Chemical type: Peptide from protein
Sequence: LAITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_126409792.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH9
Chemical type: Peptide from protein
Sequence: LAITPEIAPYF
Position: 164-174
Source molecule (GenBank): WP_126409792.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH10
Chemical type: Peptide from protein
Sequence: LTITPEIAPFF
Position: 164-174
Source molecule (GenBank): WP_061947040.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH10
Chemical type: Peptide from protein
Sequence: LTITPEIAPFF
Position: 164-174
Source molecule (GenBank): WP_061947040.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH10
Chemical type: Peptide from protein
Sequence: LTITPEIAPFF
Position: 164-174
Source molecule (GenBank): WP_061947040.1
Assay category: MhcBinding
Result: Positive

Epitope: HdH11
Chemical type: Peptide from protein
Sequence: LTLTPEIAPYF
Position: 161-171
Source molecule (GenBank): WP_016175303.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH11
Chemical type: Peptide from protein
Sequence: LTLTPEIAPYF
Position: 161-171
Source molecule (GenBank): WP_016175303.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HdH11
Chemical type: Peptide from protein
Sequence: LTLTPEIAPYF
Position: 161-171
Source molecule (GenBank): WP_016175303.1
Assay category: MhcBinding
Result: Positive

Epitope: NSLKPEIPDYF
Chemical type: Peptide, no natural source
Sequence: NSLKPEIPDYF
Assay category: TCell
Result: Positive

Epitope: NSLKPEIPDYF
Chemical type: Peptide, no natural source
Sequence: NSLKPEIPDYF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: GTIRPEIREMW
Chemical type: Peptide, no natural source
Sequence: GTIRPEIREMW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: GTIRPEIREMW
Chemical type: Peptide, no natural source
Sequence: GTIRPEIREMW
Assay category: TCell
Result: Positive

Epitope: LSLRPEIPLFF
Chemical type: Peptide, no natural source
Sequence: LSLRPEIPLFF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: LSLRPEIPLFF
Chemical type: Peptide, no natural source
Sequence: LSLRPEIPLFF
Assay category: TCell
Result: Positive

Epitope: KSFVPELKPAF
Chemical type: Peptide, no natural source
Sequence: KSFVPELKPAF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KSFVPELKPAF
Chemical type: Peptide, no natural source
Sequence: KSFVPELKPAF
Assay category: TCell
Result: Positive

Epitope: WTYRPEVRGVW
Chemical type: Peptide, no natural source
Sequence: WTYRPEVRGVW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: WTYRPEVRGVW
Chemical type: Peptide, no natural source
Sequence: WTYRPEVRGVW
Assay category: TCell
Result: Positive

Epitope: SSFSPELRMRW
Chemical type: Peptide, no natural source
Sequence: SSFSPELRMRW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: SSFSPELRMRW
Chemical type: Peptide, no natural source
Sequence: SSFSPELRMRW
Assay category: TCell
Result: Positive

Epitope: KSCTPEVREYF
Chemical type: Peptide, no natural source
Sequence: KSCTPEVREYF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KSCTPEVREYF
Chemical type: Peptide, no natural source
Sequence: KSCTPEVREYF
Assay category: TCell
Result: Positive

Epitope: ASFSPELRMAW
Chemical type: Peptide, no natural source
Sequence: ASFSPELRMAW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: ASFSPELRMAW
Chemical type: Peptide, no natural source
Sequence: ASFSPELRMAW
Assay category: TCell
Result: Positive

Epitope: KSLAPEVRDLF
Chemical type: Peptide, no natural source
Sequence: KSLAPEVRDLF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: KSLAPEVRDLF
Chemical type: Peptide, no natural source
Sequence: KSLAPEVRDLF
Assay category: TCell
Result: Positive

Epitope: NSVKPEIRPVW
Chemical type: Peptide, no natural source
Sequence: NSVKPEIRPVW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NSVKPEIRPVW
Chemical type: Peptide, no natural source
Sequence: NSVKPEIRPVW
Assay category: TCell
Result: Positive

Epitope: NSFRPEVAMKY
Chemical type: Peptide, no natural source
Sequence: NSFRPEVAMKY
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NSFRPEVAMKY
Chemical type: Peptide, no natural source
Sequence: NSFRPEVAMKY
Assay category: TCell
Result: Positive

Epitope: YSFKPELKEIF
Chemical type: Peptide, no natural source
Sequence: YSFKPELKEIF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: YSFKPELKEIF
Chemical type: Peptide, no natural source
Sequence: YSFKPELKEIF
Assay category: TCell
Result: Positive

Epitope: GSLAPEIRMYW
Chemical type: Peptide, no natural source
Sequence: GSLAPEIRMYW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: GSLAPEIRMYW
Chemical type: Peptide, no natural source
Sequence: GSLAPEIRMYW
Assay category: TCell
Result: Positive

Epitope: SALRPEIRLLW
Chemical type: Peptide, no natural source
Sequence: SALRPEIRLLW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: SALRPEIRLLW
Chemical type: Peptide, no natural source
Sequence: SALRPEIRLLW
Assay category: TCell
Result: Positive

Epitope: RTYVPEIKHRW
Chemical type: Peptide, no natural source
Sequence: RTYVPEIKHRW
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: RTYVPEIKHRW
Chemical type: Peptide, no natural source
Sequence: RTYVPEIKHRW
Assay category: TCell
Result: Positive