Reference: Claudia Lemmel; Steffen Weik; Ute Eberle; Jörn Dengjel; Thomas Kratt; Horst-Dieter Becker; Hans-Georg Rammensee; Stefan Stevanovic. "Differential quantitative analysis of MHC ligands by mass spectrometry using stable isotope labeling." Nature biotechnology (2004).

Epitope: Tapasin (372-380)
Chemical type: Peptide from protein
Sequence: TTEQHGARY
Position: 372-380
Source molecule (GenBank): O15533.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Tapasin (372-380)
Chemical type: Peptide from protein
Sequence: TTEQHGARY
Position: 372-380
Source molecule (GenBank): O15533.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Myosin heavy chain (831-838)
Chemical type: Peptide from protein
Sequence: FTKVKPLL
Position: 855-862
Source molecule (GenBank): Q7Z406.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Myosin heavy chain (831-838)
Chemical type: Peptide from protein
Sequence: FTKVKPLL
Position: 855-862
Source molecule (GenBank): Q7Z406.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Poly IG receptor (656-664)
Chemical type: Peptide from protein
Sequence: VAVGVARAR
Position: 656-664
Source molecule (GenBank): NP_002635.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Poly IG receptor (656-664)
Chemical type: Peptide from protein
Sequence: VAVGVARAR
Position: 656-664
Source molecule (GenBank): NP_002635.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Translocon-associated protein β-SU
Chemical type: Peptide from protein
Sequence: DVSHTVVLR
Assay category: MhcLigandElution
Result: Positive

Epitope: Translocon-associated protein β-SU
Chemical type: Peptide from protein
Sequence: DVSHTVVLR
Assay category: MhcLigandElution
Result: Positive

Epitope: Fatty acid-binding protein (114-122)
Chemical type: Peptide from protein
Sequence: TLGDIVFKR
Position: 114-122
Source molecule (GenBank): AAA52418.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Fatty acid-binding protein (114-122)
Chemical type: Peptide from protein
Sequence: TLGDIVFKR
Position: 114-122
Source molecule (GenBank): AAA52418.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Ras-GAP SH3 binding protein 2 (60-68)
Chemical type: Peptide from protein
Sequence: DIHHKVLSL
Position: 60-68
Source molecule (GenBank): Q9UN86.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Ras-GAP SH3 binding protein 2 (60-68)
Chemical type: Peptide from protein
Sequence: DIHHKVLSL
Position: 60-68
Source molecule (GenBank): Q9UN86.2
Assay category: MhcLigandElution
Result: Positive

Epitope: SH3BGR3-like (23-31)
Chemical type: Peptide from protein
Sequence: EVTRILDGK
Position: 23-31
Source molecule (GenBank): Q9H299.1
Assay category: MhcLigandElution
Result: Positive

Epitope: SH3BGR3-like (23-31)
Chemical type: Peptide from protein
Sequence: EVTRILDGK
Position: 23-31
Source molecule (GenBank): Q9H299.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin alpha (204-212)
Chemical type: Peptide from protein
Sequence: TTAEREIVR
Position: 204-212
Source molecule (GenBank): AAA51577.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin alpha (204-212)
Chemical type: Peptide from protein
Sequence: TTAEREIVR
Position: 204-212
Source molecule (GenBank): AAA51577.1
Assay category: MhcLigandElution
Result: Positive

Epitope: PNAS10 (88-97)
Chemical type: Peptide from protein
Sequence: SIFDGRVVAK
Position: 107-116
Source molecule (GenBank): Q9UM00.2
Assay category: MhcLigandElution
Result: Positive

Epitope: PNAS10 (88-97)
Chemical type: Peptide from protein
Sequence: SIFDGRVVAK
Position: 107-116
Source molecule (GenBank): Q9UM00.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin alpha (366-374)
Chemical type: Peptide from protein
Sequence: EAGPSIVHR
Position: 366-374
Source molecule (GenBank): AAA51577.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin alpha (366-374)
Chemical type: Peptide from protein
Sequence: EAGPSIVHR
Position: 366-374
Source molecule (GenBank): AAA51577.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B (134-144)
Chemical type: Peptide from protein
Sequence: DTAAQITQR
Position: 161-169
Source molecule (GenBank): AAA52661.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B (134-144)
Chemical type: Peptide from protein
Sequence: DTAAQITQR
Position: 161-169
Source molecule (GenBank): AAA52661.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HNRP A2/B1 (139-147)
Chemical type: Peptide from protein
Sequence: DTIEIITDR
Position: 139-147
Source molecule (GenBank): P22626.2
Assay category: MhcLigandElution
Result: Positive

Epitope: HNRP A2/B1 (139-147)
Chemical type: Peptide from protein
Sequence: DTIEIITDR
Position: 139-147
Source molecule (GenBank): P22626.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Aldolase A (34-42)
Chemical type: Peptide from protein
Sequence: ESTGSIAKR
Position: 35-43
Source molecule (GenBank): CAA30979.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Aldolase A (34-42)
Chemical type: Peptide from protein
Sequence: ESTGSIAKR
Position: 35-43
Source molecule (GenBank): CAA30979.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Glucosidase II alpha subunit (3-11)
Chemical type: Peptide from protein
Sequence: AVAAVAARR
Position: 3-11
Source molecule (GenBank): Q14697.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Glucosidase II alpha subunit (3-11)
Chemical type: Peptide from protein
Sequence: AVAAVAARR
Position: 3-11
Source molecule (GenBank): Q14697.3
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B (133-143)
Chemical type: Peptide from protein
Sequence: TAADTAAQITR
Position: 133-143
Source molecule (GenBank): ACN90997.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HLA-B (133-143)
Chemical type: Peptide from protein
Sequence: TAADTAAQITR
Position: 133-143
Source molecule (GenBank): ACN90997.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin beta (364-372)
Chemical type: Peptide from protein
Sequence: ESGPSIVHR
Position: 364-372
Source molecule (GenBank): P02570
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin beta (364-372)
Chemical type: Peptide from protein
Sequence: ESGPSIVHR
Position: 364-372
Source molecule (GenBank): P02570
Assay category: MhcLigandElution
Result: Positive

Epitope: Ubiquitin (63-71)
Chemical type: Peptide from protein
Sequence: KESTLHLVL
Position: 63-71
Source molecule (GenBank): P02248
Assay category: MhcLigandElution
Result: Positive

Epitope: Similar to x-kinase (532-540)
Chemical type: Peptide from protein
Sequence: HLAVERGKV
Position: 532-540
Source molecule (GenBank): NP_848605.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Talin 1 (290-298)
Chemical type: Peptide from protein
Sequence: SEIEAKVRY
Position: 290-298
Source molecule (GenBank): AAD13152.1
Assay category: MhcLigandElution
Result: Positive

Epitope: WD-repeat protein 6 (432-441)
Chemical type: Peptide from protein
Sequence: TLFPGKVHSL
Position: 432-441
Source molecule (GenBank): Q9NNW5.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Methylosome protein 50 (187-195)
Chemical type: Peptide from protein
Sequence: SEDNRILLW
Position: 187-195
Source molecule (GenBank): NP_077007.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RNA-dependent helicase p68 (148-156)
Chemical type: Peptide from protein
Sequence: YLLPAIVHI
Position: 96-104
Source molecule (GenBank): CAA09408.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Proteasome activator complex SU 3 (114-122)
Chemical type: Peptide from protein
Sequence: QLVDIIEKV
Position: 114-122
Source molecule (GenBank): P61289.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Similar to mitochon. ribosom. prot. S4  (78-86)
Chemical type: Peptide from protein
Sequence: ALLDKLYAL
Position: 78-86
Source molecule (GenBank): NP_060755.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Actin alpha skeletal muscle (73-81)
Chemical type: Peptide from protein
Sequence: IEHGIITNW
Position: 73-81
Source molecule (GenBank): AAP37280.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Small nuclear ribonucleoprotein G (68-76)
Chemical type: Peptide from protein
Sequence: IMLEALERV
Position: 68-76
Source molecule (GenBank): NP_003087.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HNRP M (268-276)
Chemical type: Peptide from protein
Sequence: LLFDRPMHV
Position: 268-276
Source molecule (GenBank): NP_005959.2
Assay category: MhcLigandElution
Result: Positive

Epitope: NPD011 (2-10)
Chemical type: Peptide from protein
Sequence: AEKLITQTF
Position: 2-10
Source molecule (GenBank): AAG44476.1
Assay category: MhcLigandElution
Result: Positive

Epitope: FLJ20671 (121-129)
Chemical type: Peptide from protein
Sequence: SEPDFVAKF
Position: 121-129
Source molecule (GenBank): NP_060394.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Basigin (48-55)
Chemical type: Peptide from protein
Sequence: TEVTGHRW
Position: 48-55
Source molecule (GenBank): NP_940991.1
Assay category: MhcLigandElution
Result: Positive

Epitope: 40S ribosomal protein S5 (12-20)
Chemical type: Peptide from protein
Sequence: AETPDIKLF
Position: 12-20
Source molecule (GenBank): NP_001000.2
Assay category: MhcLigandElution
Result: Positive

Epitope: Sortilin-related receptor (245-253)
Chemical type: Peptide from protein
Sequence: QEHVKSFSW
Position: 245-253
Source molecule (GenBank): NP_003096.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Coatomer gamma subunit (147-155)
Chemical type: Peptide from protein
Sequence: AIVDKVPSV
Position: 147-155
Source molecule (GenBank): NP_057212.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Sorting nexin 5 (257-265)
Chemical type: Peptide from protein
Sequence: EEPTVIKKY
Position: 257-265
Source molecule (GenBank): NP_055241.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Multifunctional protein ADE2 (69-77)
Chemical type: Peptide from protein
Sequence: QEAGIKTAF
Position: 69-77
Source molecule (GenBank): P22234.3
Assay category: MhcLigandElution
Result: Positive

Epitope: Histone H2B.f
Chemical type: Peptide from protein
Sequence: GEASLRLAHY
Assay category: MhcLigandElution
Result: Positive

Epitope: Ras-GTPase-activating protein (243-251)
Chemical type: Peptide from protein
Sequence: QEDLRTFSW
Position: 243-251
Source molecule (GenBank): NP_005745.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Cytokeratin 18 (89-97)
Chemical type: Peptide from protein
Sequence: RLASYLDRV
Position: 90-98
Source molecule (GenBank): AAH00698.1
Assay category: MhcLigandElution
Result: Positive