LiteFold/IEDB huggingface dataset:
Reference: Haydn T Kissick; Martin G Sanda; Laura K Dunn; Mohamed S Arredouani. "Immunization with a peptide containing MHC class I and II epitopes derived from the tumor antigen SIM2 induces an effective CD4 and CD8 T-cell response." PloS one (2014).

Epitope: SIM2-241
Chemical type: Peptide from protein
Sequence: KLIFLDSRV
Position: 241-249
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Negative
Host: M 8-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-241
Chemical type: Peptide from protein
Sequence: KLIFLDSRV
Position: 241-249
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Negative
Host: M 8-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-205
Chemical type: Peptide from protein
Sequence: YQIVGLVAV
Position: 205-213
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Negative
Host: M 8-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-205
Chemical type: Peptide from protein
Sequence: YQIVGLVAV
Position: 205-213
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Negative
Host: M 8-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-237
Chemical type: Peptide from protein
Sequence: SLDLKLIFL
Position: 237-245
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Negative
Host: M 8-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-237
Chemical type: Peptide from protein
Sequence: SLDLKLIFL
Position: 237-245
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Positive
Host: M 8-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-237
Chemical type: Peptide from protein
Sequence: SLDLKLIFL
Position: 237-245
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Negative
Host: M 8-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-237
Chemical type: Peptide from protein
Sequence: SLDLKLIFL
Position: 237-245
Source molecule (GenBank): NP_033664.2
Assay category: TCell
Result: Positive
Host: M 8-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: SIM2-240-254
Chemical type: Peptide from protein
Sequence: LKLIFLDSRVTEVTG
Position: 240-254
Source molecule (GenBank): Q14190.2
Assay category: TCell
Result: Positive
Host: M 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Elena N Klyushnenkova; Vladimir B Riabov; Diana V Kouiavskaia; Ashley Wietsma; Min Zhan; Richard B Alexander. "Breaking immune tolerance by targeting CD25+ regulatory T cells is essential for the anti-tumor effect of the CTLA-4 blockade in an HLA-DR transgenic mouse model of prostate cancer." The Prostate (2014).

Epitope: PSA 65-73
Chemical type: Peptide from protein
Sequence: HCIRNKSVI
Position: 65-73
Source molecule (GenBank): P07288.2
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: PSA 65-73
Chemical type: Peptide from protein
Sequence: HCIRNKSVI
Position: 65-73
Source molecule (GenBank): P07288.2
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PSA 65-73
Chemical type: Peptide from protein
Sequence: HCIRNKSVI
Position: 65-73
Source molecule (GenBank): P07288.2
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Julia Shih; Munira Rahman; Quang T Luong; Shirley H Lomeli; Joseph Riss; Robert M Prins; Ali O Gure; Gang Zeng. "Dominant B-cell epitopes from cancer/stem cell antigen SOX2 recognized by serum samples from cancer patients." American journal of clinical and experimental immunology (2014).

Epitope: SOX2:52-87
Chemical type: Peptide from protein
Sequence: SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEK
Position: 52-87
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Positive

Epitope: SOX2:52-87
Chemical type: Peptide from protein
Sequence: SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEK
Position: 52-87
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:52-87
Chemical type: Peptide from protein
Sequence: SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEK
Position: 52-87
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Positive

Epitope: SOX2:52-87
Chemical type: Peptide from protein
Sequence: SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEK
Position: 52-87
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:98-124
Chemical type: Peptide from protein
Sequence: RALHMKEHPDYKYRPRRKTKTLMKKDK
Position: 98-124
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Positive

Epitope: SOX2:98-124
Chemical type: Peptide from protein
Sequence: RALHMKEHPDYKYRPRRKTKTLMKKDK
Position: 98-124
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:98-124
Chemical type: Peptide from protein
Sequence: RALHMKEHPDYKYRPRRKTKTLMKKDK
Position: 98-124
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Positive

Epitope: SOX2:98-124
Chemical type: Peptide from protein
Sequence: RALHMKEHPDYKYRPRRKTKTLMKKDK
Position: 98-124
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:5-37
Chemical type: Peptide from protein
Sequence: METELKPPGPQQTSGGGGGNSTAAAAGGNQKNS
Position: 5-37
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:5-37
Chemical type: Peptide from protein
Sequence: METELKPPGPQQTSGGGGGNSTAAAAGGNQKNS
Position: 5-37
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:5-37
Chemical type: Peptide from protein
Sequence: METELKPPGPQQTSGGGGGNSTAAAAGGNQKNS
Position: 5-37
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative

Epitope: SOX2:5-37
Chemical type: Peptide from protein
Sequence: METELKPPGPQQTSGGGGGNSTAAAAGGNQKNS
Position: 5-37
Source molecule (GenBank): P48431.1
Assay category: BCell
Result: Negative
Reference: Anshu Rastogi; Shyh-Han Tan; Sreedatta Banerjee; Shashwat Sharad; Jacob Kagan; Sudhir Srivastava; David G McLeod; Shiv Srivastava; Alagarsamy Srinivasan. "ERG monoclonal antibody in the diagnosis and biological stratification of prostate cancer: delineation of minimal epitope, critical residues for binding, and molecular basis of specificity." Monoclonal antibodies in immunodiagnosis and immunotherapy (2014).

Epitope: P21
Chemical type: Peptide from protein
Sequence: RVPQQDWL
Position: 50-57
Source molecule (GenBank): NP_891548.1
Assay category: BCell
Result: Positive

Epitope: P21
Chemical type: Peptide from protein
Sequence: RVPQQDWL
Position: 50-57
Source molecule (GenBank): NP_891548.1
Assay category: BCell
Result: Positive

Epitope: P21
Chemical type: Peptide from protein
Sequence: RVPQQDWL
Position: 50-57
Source molecule (GenBank): NP_891548.1
Assay category: BCell
Result: Positive
Reference: Paul J Mintz; Anna Cecilia Rietz; Marina Cardó-Vila; Michael G Ozawa; Eleonora Dondossola; Kim-Anh Do; Jeri Kim; Patricia Troncoso; Christopher J Logothetis; Richard L Sidman; Renata Pasqualini; Wadih Arap. "Discovery and horizontal follow-up of an autoantibody signature in human prostate cancer." Proceedings of the National Academy of Sciences of the United States of America (2015).

Epitope: P2
Chemical type: Peptide, no natural source
Sequence: CSASDLSC
Assay category: BCell
Result: Positive
Host: M

Epitope: P3
Chemical type: Peptide, no natural source
Sequence: CNSAFAGC
Assay category: BCell
Result: Positive
Host: M

Epitope: P4
Chemical type: Peptide, no natural source
Sequence: CSYTFAGC
Assay category: BCell
Result: Positive
Host: M

Epitope: P5
Chemical type: Peptide, no natural source
Sequence: CSTFAGSC
Assay category: BCell
Result: Positive
Host: M

Epitope: P6
Chemical type: Peptide, no natural source
Sequence: CRDGYHHC
Assay category: BCell
Result: Positive
Host: M

Epitope: P8
Chemical type: Peptide, no natural source
Sequence: CIDMTHQC
Assay category: BCell
Result: Positive
Host: M

Epitope: P9
Chemical type: Peptide, no natural source
Sequence: CNQSMWSC
Assay category: BCell
Result: Positive
Host: M

Epitope: P10
Chemical type: Peptide, no natural source
Sequence: CQFENGTC
Assay category: BCell
Result: Positive
Host: M

Epitope: P11
Chemical type: Peptide, no natural source
Sequence: CAVKSVTC
Assay category: BCell
Result: Positive
Host: M

Epitope: P12
Chemical type: Peptide, no natural source
Sequence: CNGFMGYC
Assay category: BCell
Result: Positive
Host: M

Epitope: P13
Chemical type: Peptide, no natural source
Sequence: CLTSENAC
Assay category: BCell
Result: Positive
Host: M

Epitope: P14
Chemical type: Peptide, no natural source
Sequence: CRASAMVC
Assay category: BCell
Result: Positive
Host: M

Epitope: P15
Chemical type: Peptide, no natural source
Sequence: CSKKFVTC
Assay category: BCell
Result: Positive
Host: M

Epitope: P16
Chemical type: Peptide, no natural source
Sequence: CKNKHTTC
Assay category: BCell
Result: Positive
Host: M

Epitope: P17
Chemical type: Peptide, no natural source
Sequence: CFETFAGC
Assay category: BCell
Result: Positive
Host: M

Epitope: P18
Chemical type: Peptide, no natural source
Sequence: CNNMYAGC
Assay category: BCell
Result: Positive
Host: M

Epitope: P19
Chemical type: Peptide, no natural source
Sequence: CFPKRVTC
Assay category: BCell
Result: Positive
Host: M

Epitope: P20
Chemical type: Peptide, no natural source
Sequence: CPRSAKNC
Assay category: BCell
Result: Positive
Host: M

Epitope: P1
Chemical type: Peptide from protein
Sequence: CTFAGSSC
Assay category: BCell
Result: Positive
Host: M

Epitope: P1
Chemical type: Peptide from protein
Sequence: CTFAGSSC
Assay category: BCell
Result: Positive
Host: M

Epitope: P1
Chemical type: Peptide from protein
Sequence: CTFAGSSC
Assay category: BCell
Result: Positive
Reference: V Riabov; I Tretyakova; R B Alexander; P Pushko; E N Klyushnenkova. "Anti-tumor effect of the alphavirus-based virus-like particle vector expressing prostate-specific antigen in a HLA-DR transgenic mouse model of prostate cancer." Vaccine (2015).

Epitope: PSA 65–73
Chemical type: Peptide from protein
Sequence: HCIRNKSVI
Position: 65-73
Source molecule (GenBank): P07288.2
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PSA 65–73
Chemical type: Peptide from protein
Sequence: HCIRNKSVI
Position: 65-73
Source molecule (GenBank): P07288.2
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: PSA 65–73
Chemical type: Peptide from protein
Sequence: HCIRNKSVI
Position: 65-73
Source molecule (GenBank): P07288.2
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: H S Lee; C L Lee; S S Li. "Comparison of the antigenic peptides between human prostatic and lysosomal acid phosphatases." Journal of protein chemistry (1991).

Epitope: P1
Chemical type: Peptide from protein
Sequence: KELKFVTLVFRHGDRSPIDTFPTKPIKESS
Assay category: BCell
Result: Positive
Host: F

Epitope: P2
Chemical type: Peptide from protein
Sequence: LQGGVLVNEILNHMKRATQIPSYKKLIMYSAHDTT
Position: 258-292
Source molecule (GenBank): P15309.3
Assay category: BCell
Result: Negative
Host: F

Epitope: P3
Chemical type: Peptide from protein
Sequence: PLERFAELVGPVIPQDWSTECMTTNSHQGTEDSTD
Position: 352-386
Source molecule (GenBank): P15309.3
Assay category: BCell
Result: Positive
Host: F

Epitope: L1
Chemical type: Peptide from protein
Sequence: RSLRFVTLLTRHGDRSPVKTYPKDPYQEEE
Assay category: BCell
Result: Positive
Host: F

Epitope: L2
Chemical type: Peptide from protein
Sequence: LQGGVLLAQIRKNLTLMATTSQLPKLLVYSAHDTT
Position: 255-289
Source molecule (GenBank): P11117.3
Assay category: BCell
Result: Negative
Host: F

Epitope: L3
Chemical type: Peptide from protein
Sequence: PLQDFLRLTEPVVPKDWQQECQLASGPADTEVIVA
Position: 350-384
Source molecule (GenBank): P11117.3
Assay category: BCell
Result: Positive
Host: F
Reference: Ichiya Honma; Toshihiko Torigoe; Yoshihiko Hirohashi; Hiroshi Kitamura; Eiji Sato; Naoya Masumori; Yasuaki Tamura; Taiji Tsukamoto; Noriyuki Sato. "Aberrant expression and potency as a cancer immunotherapy target of alpha-methylacyl-coenzyme A racemase in prostate cancer." Journal of translational medicine (2009).

Epitope: AMACR1
Chemical type: Peptide from protein
Sequence: NYLALSGVL
Position: 125-133
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR1
Chemical type: Peptide from protein
Sequence: NYLALSGVL
Position: 125-133
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR1
Chemical type: Peptide from protein
Sequence: NYLALSGVL
Position: 125-133
Source molecule (GenBank): NP_001161067.1
Assay category: MhcBinding
Result: Positive

Epitope: AMACR2
Chemical type: Peptide from protein
Sequence: NMVEGTAYL
Position: 183-191
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR2
Chemical type: Peptide from protein
Sequence: NMVEGTAYL
Position: 183-191
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR2
Chemical type: Peptide from protein
Sequence: NMVEGTAYL
Position: 183-191
Source molecule (GenBank): NP_001161067.1
Assay category: MhcBinding
Result: Positive

Epitope: AMACR3
Chemical type: Peptide from protein
Sequence: FYELLIKGL
Position: 240-248
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR3
Chemical type: Peptide from protein
Sequence: FYELLIKGL
Position: 240-248
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR3
Chemical type: Peptide from protein
Sequence: FYELLIKGL
Position: 240-248
Source molecule (GenBank): NP_001161067.1
Assay category: MhcBinding
Result: Positive

Epitope: AMACR4
Chemical type: Peptide from protein
Sequence: IYQLNSDKII
Position: 364-373
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR4
Chemical type: Peptide from protein
Sequence: IYQLNSDKII
Position: 364-373
Source molecule (GenBank): NP_001161067.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AMACR4
Chemical type: Peptide from protein
Sequence: IYQLNSDKII
Position: 364-373
Source molecule (GenBank): NP_001161067.1
Assay category: MhcBinding
Result: Positive
Reference: Paul H Naylor; Karla E Hernandez; April E Nixon; Harvey J Brandwein; Gabriel P Haas; Ching Y Wang; John W Hadden. "IRX-2 increases the T cell-specific immune response to protein/peptide vaccines." Vaccine (2010).

Epitope: NFT
Chemical type: Peptide from protein
Sequence: NFTQIPHLAGTEQNF
Position: 76-90
Source molecule (GenBank): AAC83972.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NFT
Chemical type: Peptide from protein
Sequence: NFTQIPHLAGTEQNF
Position: 76-90
Source molecule (GenBank): AAC83972.1
Assay category: TCell
Result: Positive-Low
Host: F 
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: NFT
Chemical type: Peptide from protein
Sequence: NFTQIPHLAGTEQNF
Position: 76-90
Source molecule (GenBank): AAC83972.1
Assay category: TCell
Result: Negative
Host: F

Epitope: NFT
Chemical type: Peptide from protein
Sequence: NFTQIPHLAGTEQNF
Position: 76-90
Source molecule (GenBank): AAC83972.1
Assay category: TCell
Result: Negative
Host: F
Reference: Lucie Jelínková; Hugo Jhun; Allison Eaton; Nikolai Petrovsky; Fidel Zavala; Bryce Chackerian. "An epitope-based malaria vaccine targeting the junctional region of circumsporozoite protein." NPJ vaccines (2021).

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host:  9.9-17 years

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host:  9.9-17 years

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: mAb CIS43 Epitope
Chemical type: Peptide from protein
Sequence: NPDPNANPNVDPNAN
Position: 101-115
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: MGG4-15 mer
Chemical type: Peptide from protein
Sequence: KQPADGNPDPNANPN
Position: 95-109
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: MGG4- 19 mer
Chemical type: Peptide from protein
Sequence: KQPADGNPDPNANPNVDPN
Position: 95-113
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: CSP crp
Chemical type: Peptide from protein
Sequence: NANPNANPNANPNANPNA
Position: 129-146
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks

Epitope: Mal
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNANPNANP
Position: 121-140
Source molecule (GenBank): AAA29527.1
Assay category: BCell
Result: Positive
Host: F 4 weeks
Reference: Lan Chen; Yan Zhang; Karin Pacheco; Shaodong Dai. "The T Cell Repertoires from Nickel Sensitized Joint Implant Failure Patients." International journal of molecular sciences (2021).

Epitope: Nickel
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host: F 
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nickel
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host: F 
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nickel
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host: F 
Cell type: cell found in tissue
Tissue: skin
Culture conditions: In Vivo
Reference: Yunjuan Zhao; Vilma Urbonaviciute; Bingze Xu; Weiwei Cai; Zeynep Sener; Changrong Ge; Rikard Holmdahl. "Cartilage Oligomeric Matrix Protein Induced Arthritis-A New Model for Rheumatoid Arthritis in the C57BL/6 Mouse." Frontiers in immunology (2021).

Epitope: P9
Chemical type: Peptide from protein
Sequence: APGFCFPGVACIQTESGA
Position: 92-109
Source molecule (GenBank): P49747.2
Assay category: TCell
Result: Negative
Host: M 9-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P9
Chemical type: Peptide from protein
Sequence: APGFCFPGVACIQTESGA
Position: 92-109
Source molecule (GenBank): P49747.2
Assay category: TCell
Result: Positive
Host: M 9-12 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Chloe Rees-Spear; Luke Muir; Sarah A Griffith; Judith Heaney; Yoann Aldon; Jonne L Snitselaar; Peter Thomas; Carl Graham; Jeffrey Seow; Nayung Lee; Annachiara Rosa; Chloe Roustan; Catherine F Houlihan; Rogier W Sanders; Ravindra K Gupta; Peter Cherepanov; Hans J Stauss; Eleni Nastouli; Katie J Doores; Marit J van Gils; Laura E McCoy. "The effect of spike mutations on SARS-CoV-2 neutralization." Cell reports (2021).

Epitope: P384
Chemical type: Discontinuous protein residues
Discontinuous residues: P384
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host: M 47 years

Epitope: COVA2-29 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: K444, V445, G446, L452, L455, F456, T470, E471, I472, S494
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host: F 44 years

Epitope: COVA2-07 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: K417, L455, F456, T470, E471, I472
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host: F 44 years

Epitope: COVA1-12 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: L455, F456, S494, N501
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host: M 47 years

Epitope: TEI470-2
Chemical type: Discontinuous protein residues
Discontinuous residues: T470, E471, I472
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  29-87 years

Epitope: TEI470-2
Chemical type: Discontinuous protein residues
Discontinuous residues: T470, E471, I472
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host: M 47 years

Epitope: S494
Chemical type: Discontinuous protein residues
Discontinuous residues: S494
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  29-87 years

Epitope: N501
Chemical type: Discontinuous protein residues
Discontinuous residues: N501
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive-Low
Host: F 44 years

Epitope: COVA2-02 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: L455, F456, T470, E471, I472
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host: F 44 years

Epitope: COVA1-18 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: T470, E471, I472, N501
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive-Low
Host: M 47 years