LiteFold/IEDB huggingface dataset:
Reference: Miroslaw K Gorny; Jared Sampson; Huiguang Li; Xunqing Jiang; Maxim Totrov; Xiao-Hong Wang; Constance Williams; Timothy O'Neal; Barbara Volsky; Liuzhe Li; Timothy Cardozo; Phillipe Nyambi; Susan Zolla-Pazner; Xiang-Peng Kong. "Human anti-V3 HIV-1 monoclonal antibodies encoded by the VH5-51/VL lambda genes define a conserved antigenic structure." PloS one (2011).

Epitope: MN V3 peptide (clade B)
Chemical type: Peptide from protein
Sequence: YNKRKRIHIGPGRAFYTTKNIIG
Position: 306-328
Source molecule (GenBank): P05877.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.6

Epitope: MN V3 peptide (clade B)
Chemical type: Peptide from protein
Sequence: YNKRKRIHIGPGRAFYTTKNIIG
Position: 306-328
Source molecule (GenBank): P05877.1
Assay category: BCell
Result: Positive

Epitope: Con A V3 peptide (consensus clade A)
Chemical type: Peptide from protein
Sequence: NNTRKSIRIGPGQTFYATGDIIG
Position: 295-317
Source molecule (GenBank): AGW27143.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.03
Reference: Ron Diskin; Johannes F Scheid; Paola M Marcovecchio; Anthony P West; Florian Klein; Han Gao; Priyanthi N P Gnanapragasam; Alexander Abadir; Michael S Seaman; Michel C Nussenzweig; Pamela J Bjorkman. "Increasing the potency and breadth of an HIV antibody by using structure-based rational design." Science (New York, N.Y.) (2011).

Epitope: Epitope of NIH45-46 on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: K96, N97, N98, E101, L121, T122, N278, T280, N281, N282, A283, K284, S365, G366, G367, D368, I371, W421, T424, G425, Q426, T449, R450, D451, G452, G453, A454, N455, N459, E460, T461, R463, N468, K470, R474
Source molecule (GenBank): Q0ED31.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.45

Epitope: Epitope of NIH45-46 on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: K96, N97, N98, E101, L121, T122, N278, T280, N281, N282, A283, K284, S365, G366, G367, D368, I371, W421, T424, G425, Q426, T449, R450, D451, G452, G453, A454, N455, N459, E460, T461, R463, N468, K470, R474
Source molecule (GenBank): Q0ED31.1
Assay category: BCell
Result: Positive
Quantitative measurement: 160.0

Epitope: Epitope of NIH45-46 on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: K96, N97, N98, E101, L121, T122, N278, T280, N281, N282, A283, K284, S365, G366, G367, D368, I371, W421, T424, G425, Q426, T449, R450, D451, G452, G453, A454, N455, N459, E460, T461, R463, N468, K470, R474
Source molecule (GenBank): Q0ED31.1
Assay category: BCell
Result: Positive
Quantitative measurement: 31000.0

Epitope: Epitope of NIH45-46 on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: K96, N97, N98, E101, L121, T122, N278, T280, N281, N282, A283, K284, S365, G366, G367, D368, I371, W421, T424, G425, Q426, T449, R450, D451, G452, G453, A454, N455, N459, E460, T461, R463, N468, K470, R474
Source molecule (GenBank): Q0ED31.1
Assay category: BCell
Result: Positive

Epitope: Epitope of NIH45-46 on HIV-1 gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: K96, N97, N98, E101, L121, T122, N278, T280, N281, N282, A283, K284, S365, G366, G367, D368, I371, W421, T424, G425, Q426, T449, R450, D451, G452, G453, A454, N455, N459, E460, T461, R463, N468, K470, R474
Source molecule (GenBank): Q0ED31.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0048
Reference: Robyn L Stanfield; Jean-Philippe Julien; Robert Pejchal; Johannes S Gach; Michael B Zwick; Ian A Wilson. "Structure-based design of a protein immunogen that displays an HIV-1 gp41 neutralizing epitope." Journal of molecular biology (2011).

Epitope: Epitope of Z13e1 on HIV-1 MPER
Chemical type: Peptide from protein
Sequence: WNWFDITN
Position: 667-674
Source molecule (GenBank): AAR22116.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.15

Epitope: Epitope of Z13e1 on HIV-1 MPER
Chemical type: Peptide from protein
Sequence: WNWFDITN
Position: 667-674
Source molecule (GenBank): AAR22116.1
Assay category: BCell
Result: Positive
Quantitative measurement: 73.0

Epitope: Epitope of Z13e1 on HIV-1 MPER
Chemical type: Peptide from protein
Sequence: WNWFDITN
Position: 667-674
Source molecule (GenBank): AAR22116.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Z13e1 on HIV-1 MPER
Chemical type: Peptide from protein
Sequence: WNWFDITN
Position: 667-674
Source molecule (GenBank): AAR22116.1
Assay category: BCell
Result: Positive
Quantitative measurement: 29.0
Reference: Zachary P Schaefer; Lucas J Bailey; Anthony A Kossiakoff. "A polar ring endows improved specificity to an antibody fragment." Protein science : a publication of the Protein Society (2016).

Epitope: Epitope of 11E H3L3 Fab on histone chaperone anti-silencing factor (Asf1)
Chemical type: Discontinuous protein residues
Discontinuous residues: L12, E23, E25, D37, D58, S59, I60, L61, V62, G63, P64, P66, N70, K71, F72, V73
Source molecule (GenBank): P32447.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.44

Epitope: Epitope of 11E H3L3 Fab on histone chaperone anti-silencing factor (Asf1)
Chemical type: Discontinuous protein residues
Discontinuous residues: L12, E23, E25, D37, D58, S59, I60, L61, V62, G63, P64, P66, N70, K71, F72, V73
Source molecule (GenBank): P32447.1
Assay category: BCell
Result: Positive
Quantitative measurement: 5.0

Epitope: Epitope of 11E H3L3 Fab on histone chaperone anti-silencing factor (Asf1)
Chemical type: Discontinuous protein residues
Discontinuous residues: L12, E23, E25, D37, D58, S59, I60, L61, V62, G63, P64, P66, N70, K71, F72, V73
Source molecule (GenBank): P32447.1
Assay category: BCell
Result: Positive
Quantitative measurement: 54000.0

Epitope: Epitope of 11E H3L3 Fab on histone chaperone anti-silencing factor (Asf1)
Chemical type: Discontinuous protein residues
Discontinuous residues: L12, E23, E25, D37, D58, S59, I60, L61, V62, G63, P64, P66, N70, K71, F72, V73
Source molecule (GenBank): P32447.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00028
Reference: Sherry L La Porte; Charles Eigenbrot; Mark Ultsch; Wei-Hsien Ho; Davide Foletti; Alison Forgie; Kevin C Lindquist; David L Shelton; Jaume Pons. "Generation of a high-fidelity antibody against nerve growth factor using library scanning mutagenesis and validation with structures of the initial and optimized Fab-antigen complexes." mAbs (2014).

Epitope: Epitope of mouse Fab 911 on NGF
Chemical type: Region on multi-chain protein
Discontinuous residues: V: G131, E132, F133, S134, S138, S140, V141, W142, D145, K171, Y173, F175, T177, R180, T227, A228, C229; W: I152, K153, G154, T204, H205, F207, R224, V230, V232
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.5

Epitope: Epitope of mouse Fab 911 on NGF
Chemical type: Region on multi-chain protein
Discontinuous residues: V: G131, E132, F133, S134, S138, S140, V141, W142, D145, K171, Y173, F175, T177, R180, T227, A228, C229; W: I152, K153, G154, T204, H205, F207, R224, V230, V232
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive

Epitope: Epitope of mouse Fab 911 on NGF
Chemical type: Region on multi-chain protein
Discontinuous residues: V: G131, E132, F133, S134, S138, S140, V141, W142, D145, K171, Y173, F175, T177, R180, T227, A228, C229; W: I152, K153, G154, T204, H205, F207, R224, V230, V232
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive
Quantitative measurement: 10.0

Epitope: Epitope of mouse Fab 911 on NGF
Chemical type: Region on multi-chain protein
Discontinuous residues: V: G131, E132, F133, S134, S138, S140, V141, W142, D145, K171, Y173, F175, T177, R180, T227, A228, C229; W: I152, K153, G154, T204, H205, F207, R224, V230, V232
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive

Epitope: Epitope of humanized Fab tanezumab on NGF
Chemical type: Discontinuous protein residues
Discontinuous residues: H129, R130, G131, E132, F133, S134, S138, S140, V141, W142, G144, Y173, F175, T177, T227, A228, C229
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.48

Epitope: Epitope of humanized Fab tanezumab on NGF
Chemical type: Discontinuous protein residues
Discontinuous residues: H129, R130, G131, E132, F133, S134, S138, S140, V141, W142, G144, Y173, F175, T177, T227, A228, C229
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive
Quantitative measurement: 0.012

Epitope: Epitope of humanized Fab tanezumab on NGF
Chemical type: Discontinuous protein residues
Discontinuous residues: H129, R130, G131, E132, F133, S134, S138, S140, V141, W142, G144, Y173, F175, T177, T227, A228, C229
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive

Epitope: Epitope of humanized Fab tanezumab on NGF
Chemical type: Discontinuous protein residues
Discontinuous residues: H129, R130, G131, E132, F133, S134, S138, S140, V141, W142, G144, Y173, F175, T177, T227, A228, C229
Source molecule (GenBank): P01138.3
Assay category: BCell
Result: Positive
Reference: Agustin Correa; Felipe Trajtenberg; Gonzalo Obal; Otto Pritsch; Guillermo Dighiero; Pablo Oppezzo; Alejandro Buschiazzo. "Structure of a human IgA1 Fab fragment at 1.55 Å resolution: potential effect of the constant domains on antigen-affinity modulation." Acta crystallographica. Section D, Biological crystallography (2013).

Epitope: Tubulin peptide
Chemical type: Peptide from protein
Sequence: TAEEEEDFGE
Position: 429-438
Source molecule (GenBank): NP_821133.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.2

Epitope: Tubulin peptide
Chemical type: Peptide from protein
Sequence: YQQYQDATAEEEEDFGEEAE
Position: 422-441
Source molecule (GenBank): NP_821133.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.3
Epitope: ZV-54 lateral ridge
Chemical type: Discontinuous protein residues
Discontinuous residues: A600, T625
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive

Epitope: ZV-54 lateral ridge
Chemical type: Discontinuous protein residues
Discontinuous residues: A600, T625
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive-High

Epitope: ZV-54 lateral ridge
Chemical type: Discontinuous protein residues
Discontinuous residues: A600, T625
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive-High

Epitope: ZV-54 lateral ridge
Chemical type: Discontinuous protein residues
Discontinuous residues: A600, T625
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive
Quantitative measurement: 149000.0

Epitope: ZV-54 lateral ridge
Chemical type: Discontinuous protein residues
Discontinuous residues: A600, T625
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.000312

Epitope: ZV-54 lateral ridge
Chemical type: Discontinuous protein residues
Discontinuous residues: A600, T625
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive
Quantitative measurement: 7.74
Reference: Anthony C Y Yau; Fredrik Piehl; Tomas Olsson; Rikard Holmdahl. "Effects of C2ta genetic polymorphisms on MHC class II expression and autoimmune diseases." Immunology (2017).

Epitope: hG6PI 325-339
Chemical type: Peptide from protein
Sequence: IWYINCFGCETHAML
Position: 325-339
Source molecule (GenBank): P06744.4
Assay category: TCell
Result: Positive
Host: M 18-22 weeks
Reference: Yannick F Fuchs; Anne Eugster; Sevina Dietz; Christian Sebelefsky; Denise Kühn; Carmen Wilhelm; Annett Lindner; Anita Gavrisan; Jan Knoop; Andreas Dahl; Anette-G Ziegler; Ezio Bonifacio. "CD8<sup>+</sup> T cells specific for the islet autoantigen IGRP are restricted in their T cell receptor chain usage." Scientific reports (2017).

Epitope: IGRP 265-273
Chemical type: Peptide from protein
Sequence: VLFGLGFAI
Position: 265-273
Source molecule (GenBank): NP_066999.1
Assay category: TCell
Result: Positive-Low
Host:  3.8-18.7 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: IGRP 265-273
Chemical type: Peptide from protein
Sequence: VLFGLGFAI
Position: 265-273
Source molecule (GenBank): NP_066999.1
Assay category: TCell
Result: Positive
Host:  23.3-45.9 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: IGRP 265-273
Chemical type: Peptide from protein
Sequence: VLFGLGFAI
Position: 265-273
Source molecule (GenBank): NP_066999.1
Assay category: TCell
Result: Positive
Host:  23.3-45.9 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: IGRP 265-273
Chemical type: Peptide from protein
Sequence: VLFGLGFAI
Position: 265-273
Source molecule (GenBank): NP_066999.1
Assay category: TCell
Result: Positive-Low
Host:  7.3-60.0 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: IGRP 265-273
Chemical type: Peptide from protein
Sequence: VLFGLGFAI
Position: 265-273
Source molecule (GenBank): NP_066999.1
Assay category: TCell
Result: Positive-Low
Host:  7.4-22.9 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Flu MP58-66
Chemical type: Peptide from protein
Sequence: GILGFVFTL
Position: 58-66
Source molecule (GenBank): Q9IQ48.1
Assay category: TCell
Result: Positive
Host: M 31.2-63.0 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Flu MP58-66
Chemical type: Peptide from protein
Sequence: GILGFVFTL
Position: 58-66
Source molecule (GenBank): Q9IQ48.1
Assay category: TCell
Result: Positive
Host: M 31.2-63.0 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Flu MP58-66
Chemical type: Peptide from protein
Sequence: GILGFVFTL
Position: 58-66
Source molecule (GenBank): Q9IQ48.1
Assay category: TCell
Result: Positive
Host: M 31.2-63.0 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Evans M Mathebula; Frederika E Faber; Wouter Van Wyngaardt; Antoinette Van Schalkwyk; Alri Pretorius; Jeanni Fehrsen. "B-cell epitopes of African horse sickness virus serotype 4 recognised by immune horse sera." The Onderstepoort journal of veterinary research (2017).

Epitope: VP1-1
Chemical type: Peptide from protein
Sequence: GFITANTIINILEKLGHTHSASDLTTL
Position: 1140-1166
Source molecule (GenBank): ALM00156.1
Assay category: BCell
Result: Positive

Epitope: VP2-1
Chemical type: Peptide from protein
Sequence: KTICDVIVTKKGRVKHKEVDGVCGYEWDETNHRFGLCEVEHDMS
Position: 20-63
Source molecule (GenBank): BAA05619.1
Assay category: BCell
Result: Positive

Epitope: VP2-2
Chemical type: Peptide from protein
Sequence: MYFSPECYPSVFLRREARSQKLDRIRNY
Position: 123-150
Source molecule (GenBank): BAA05619.1
Assay category: BCell
Result: Negative

Epitope: VP2-3
Chemical type: Peptide from protein
Sequence: LILISSGVYTFGNKFLLSK
Position: 1036-1054
Source molecule (GenBank): BAA05619.1
Assay category: BCell
Result: Positive

Epitope: VP3-2
Chemical type: Peptide from protein
Sequence: IANDFEDLMLVDHVYIQRTMLPEPRLDDINEFRRQGFF
Position: 693-730
Source molecule (GenBank): BAA05621.1
Assay category: BCell
Result: Positive

Epitope: VP4-1
Chemical type: Peptide from protein
Sequence: YAFQHVTVLHGSEAETLSYADPKRHVVKGQPKAAPMYD
Position: 123-160
Source molecule (GenBank): ALL99907.1
Assay category: BCell
Result: Positive

Epitope: VP5-2
Chemical type: Peptide from protein
Sequence: GMPTTPELHKRKLQKSMGTHPIYMGSMDYAI
Position: 430-460
Source molecule (GenBank): BAA05620.1
Assay category: BCell
Result: Negative

Epitope: VP5-3
Chemical type: Peptide from protein
Sequence: TLESAPDPLSPGEQLLYNKVSEIEKMEKEDR
Position: 80-110
Source molecule (GenBank): BAA05620.1
Assay category: BCell
Result: Positive

Epitope: VP6-1
Chemical type: Peptide from protein
Sequence: GESLDRIGGCSGNSKTEGEEAKAG
Position: 181-204
Source molecule (GenBank): YP_052964.1
Assay category: BCell
Result: Positive

Epitope: VP7-1
Chemical type: Peptide from protein
Sequence: GTFVTVDGVNVAAGDVVAWNTIAPVNVGN
Position: 207-235
Source molecule (GenBank): ALL99691.1
Assay category: BCell
Result: Positive

Epitope: VP7-2
Chemical type: Peptide from protein
Sequence: MDAIAARALSVVRACVTVTD
Position: 1-20
Source molecule (GenBank): YP_052956.1
Assay category: BCell
Result: Positive

Epitope: NS3-1
Chemical type: Peptide from protein
Sequence: MNLASIAKNYSMHNGESGAIVPYVPPPYNFASAPTFSQSTSQMESVSLGI
Position: 1-50
Source molecule (GenBank): AAG17686.1
Assay category: BCell
Result: Positive

Epitope: NS3-2
Chemical type: Peptide from protein
Sequence: SSTTGASGALKDEKAAFGAMAEALRDPE
Position: 56-83
Source molecule (GenBank): AAG17686.1
Assay category: BCell
Result: Positive

Epitope: NS4-1
Chemical type: Peptide from protein
Sequence: VPVRYHPVESLQEVLKAEEGALQRVVNLAGN
Assay category: BCell
Result: Positive
Reference: Sha Ha; Fengsheng Li; Matthew C Troutman; Daniel C Freed; Aimin Tang; John W Loughney; Dai Wang; I-Ming Wang; Josef Vlasak; David C Nickle; Richard R Rustandi; Melissa Hamm; Pete A DePhillips; Ningyan Zhang; Jason S McLellan; Hua Zhu; Stuart P Adler; Michael A McVoy; Zhiqiang An; Tong-Ming Fu. "Neutralization of Diverse Human Cytomegalovirus Strains Conferred by Antibodies Targeting Viral gH/gL/pUL128-131 Pentameric Complex." Journal of virology (2017).

Epitope: gH (26-43)
Chemical type: Peptide from protein
Sequence: GADAASEALDPHAFHLLL
Position: 26-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Negative
Host: F 3-4 months

Epitope: gH (26-43)
Chemical type: Peptide from protein
Sequence: GADAASEALDPHAFHLLL
Position: 26-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive
Host: F 3-4 months

Epitope: gH (26-43)
Chemical type: Peptide from protein
Sequence: GADAASEALDPHAFHLLL
Position: 26-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive
Host: F 3-4 months

Epitope: gH (26-43)
Chemical type: Peptide from protein
Sequence: GADAASEALDPHAFHLLL
Position: 26-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive
Host: F 3-4 months

Epitope: gH (26-43)
Chemical type: Peptide from protein
Sequence: GADAASEALDPHAFHLLL
Position: 26-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive
Host: F 3-4 months
Reference: Silvia Pietrobon; Ilaria Bononi; Elisa Mazzoni; Francesca Lotito; Marco Manfrini; Andrea Puozzo; Federica Destro; Giovanni Guerra; Pier Francesco Nocini; Fernanda Martini; Mauro G Tognon. "Specific IgG Antibodies React to Mimotopes of BK Polyomavirus, a Small DNA Tumor Virus, in Healthy Adult Sera." Frontiers in immunology (2017).

Epitope: VP1-L
Chemical type: Peptide from protein
Sequence: LKLSAENDFSSDSPERK
Position: 18-34
Source molecule (GenBank): AAL31862.1
Assay category: BCell
Result: Positive
Host:  18-90 years

Epitope: VP1-M
Chemical type: Peptide from protein
Sequence: MLNLHAGSQKVHEHGGGK
Position: 20-37
Source molecule (GenBank): AAG23643.1
Assay category: BCell
Result: Positive
Host:  18-90 years
Reference: Róża Sawicka; Paweł Siedlecki; Barbara Kalenik; Jan P Radomski; Violetta Sączyńska; Anna Porębska; Bogusław Szewczyk; Agnieszka Sirko; Anna Góra-Sochacka. "Characterization of mAb6-9-1 monoclonal antibody against hemagglutinin of avian influenza virus H5N1 and its engineered derivative, single-chain variable fragment antibody." Acta biochimica Polonica (2017).

Epitope: VHWDFRQWWQPS
Chemical type: Peptide, no natural source
Sequence: VHWDFRQWWQPS
Assay category: BCell
Result: Positive

Epitope: VHWDFRQWWQPS
Chemical type: Peptide, no natural source
Sequence: VHWDFRQWWQPS
Assay category: BCell
Result: Positive

Epitope: VHWDFRQWWQPS
Chemical type: Peptide, no natural source
Sequence: VHWDFRQWWQPS
Assay category: BCell
Result: Positive

Epitope: HA epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D140, S145
Source molecule (GenBank): ABW06347.1
Assay category: BCell
Result: Positive

Epitope: HA epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D140, S145
Source molecule (GenBank): ABW06347.1
Assay category: BCell
Result: Positive

Epitope: HA epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D140, S145
Source molecule (GenBank): ABW06347.1
Assay category: BCell
Result: Positive
Reference: Roberto Di Niro; Luka Mesin; Nai-Ying Zheng; Jorunn Stamnaes; Michael Morrissey; Jane-Hwei Lee; Min Huang; Rasmus Iversen; M Fleur du Pré; Shuo-Wang Qiao; Knut E A Lundin; Patrick C Wilson; Ludvig M Sollid. "High abundance of plasma cells secreting transglutaminase 2-specific IgA autoantibodies with limited somatic hypermutation in celiac disease intestinal lesions." Nature medicine (2012).

Epitope: DQ2.5-glia-α2 epitope (deamidated 33mer)
Chemical type: Peptide from protein
Sequence: LQLQPFPQPQLPYPQPQLPYPQPQLPYPQPQPF
Position: 76-108
Source molecule (GenBank): P18573.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: gastrointestinal tract
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Leo Hanke; Kevin E Knockenhauer; R Camille Brewer; Eline van Diest; Florian I Schmidt; Thomas U Schwartz; Hidde L Ploegh. "The Antiviral Mechanism of an Influenza A Virus Nucleoprotein-Specific Single-Domain Antibody Fragment." mBio (2016).

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.23

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of αNP-VHH1 on NP
Chemical type: Discontinuous protein residues
Discontinuous residues: Y52, R99, D101, G102, K103, W104, Q311, Y313, I316, R317, P318, N319, E320, N321, P322, A323, S359, E372, M374, E375, S376, S377, T378
Source molecule (GenBank): Q1K9H2.1
Assay category: BCell
Result: Positive