Reference: Pleun Hombrink; Chopie Hassan; Michel G D Kester; Arnoud H de Ru; Cornelis A M van Bergen; Harm Nijveen; Jan W Drijfhout; J H Frederik Falkenburg; Mirjam H M Heemskerk; Peter A van Veelen. "Discovery of T cell epitopes implementing HLA-peptidomics into a reverse immunology approach." Journal of immunology (Baltimore, Md. : 1950) (2013).

Epitope: APOBEC3F-1S
Chemical type: Peptide from protein
Sequence: FLSEHPNVTL
Position: 107-116
Source molecule (GenBank): Q9UH17.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: APOBEC3F-1S
Chemical type: Peptide from protein
Sequence: FLSEHPNVTL
Position: 107-116
Source molecule (GenBank): Q9UH17.1
Assay category: MhcLigandElution
Result: Positive

Epitope: APOBEC3F-1S
Chemical type: Peptide from protein
Sequence: FLSEHPNVTL
Position: 107-116
Source molecule (GenBank): Q9UH17.1
Assay category: MhcBinding
Result: Positive

Epitope: APOBEC3F-1A
Chemical type: Peptide from protein
Sequence: FLAEHPNVTL
Position: 106-115
Source molecule (GenBank): NP_660341.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: APOBEC3F-1A
Chemical type: Peptide from protein
Sequence: FLAEHPNVTL
Position: 106-115
Source molecule (GenBank): NP_660341.2
Assay category: MhcLigandElution
Result: Positive

Epitope: APOBEC3F-1A
Chemical type: Peptide from protein
Sequence: FLAEHPNVTL
Position: 106-115
Source molecule (GenBank): NP_660341.2
Assay category: MhcBinding
Result: Positive

Epitope: ATP10D
Chemical type: Peptide from protein
Sequence: TAALFIILL
Position: 1234-1242
Source molecule (GenBank): AAI31536.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ATP10D
Chemical type: Peptide from protein
Sequence: TAALFIILL
Position: 1234-1242
Source molecule (GenBank): AAI31536.1
Assay category: MhcBinding
Result: Negative

Epitope: ATR
Chemical type: Peptide from protein
Sequence: MVLTRIIAI
Position: 211-219
Source molecule (GenBank): NP_001175.2
Assay category: MhcLigandElution
Result: Positive

Epitope: ATR
Chemical type: Peptide from protein
Sequence: MVLTRIIAI
Position: 211-219
Source molecule (GenBank): NP_001175.2
Assay category: MhcBinding
Result: Negative

Epitope: CDC26-1F
Chemical type: Peptide from protein
Sequence: FVAGTQEVFV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CDC26-1F
Chemical type: Peptide from protein
Sequence: FVAGTQEVFV
Assay category: MhcLigandElution
Result: Positive

Epitope: CDC26-1F
Chemical type: Peptide from protein
Sequence: FVAGTQEVFV
Assay category: MhcBinding
Result: Positive

Epitope: CHRNA9-1P
Chemical type: Peptide from protein
Sequence: TFLKIIPML
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CHRNA9-1P
Chemical type: Peptide from protein
Sequence: TFLKIIPML
Assay category: MhcLigandElution
Result: Positive

Epitope: CHRNA9-1P
Chemical type: Peptide from protein
Sequence: TFLKIIPML
Assay category: MhcBinding
Result: Positive

Epitope: CMPK1-1M
Chemical type: Peptide from protein
Sequence: TQIHSMVNL
Assay category: MhcLigandElution
Result: Positive

Epitope: CMPK1-1M
Chemical type: Peptide from protein
Sequence: TQIHSMVNL
Assay category: MhcBinding
Result: Positive

Epitope: GTF3C5
Chemical type: Peptide from protein
Sequence: SMYDKVLML
Position: 144-152
Source molecule (GenBank): EAW88027.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HIVEP1-1S
Chemical type: Peptide from protein
Sequence: SLPKHSVTI
Position: 1068-1076
Source molecule (GenBank): CAA35798.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HIVEP1-1S
Chemical type: Peptide from protein
Sequence: SLPKHSVTI
Position: 1068-1076
Source molecule (GenBank): CAA35798.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HIVEP1-1S
Chemical type: Peptide from protein
Sequence: SLPKHSVTI
Position: 1068-1076
Source molecule (GenBank): CAA35798.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HIVEP1-1S
Chemical type: Peptide from protein
Sequence: SLPKHSVTI
Position: 1068-1076
Source molecule (GenBank): CAA35798.1
Assay category: MhcLigandElution
Result: Positive

Epitope: HIVEP1-1S
Chemical type: Peptide from protein
Sequence: SLPKHSVTI
Position: 1068-1076
Source molecule (GenBank): CAA35798.1
Assay category: MhcBinding
Result: Positive

Epitope: MAGEF1
Chemical type: Peptide from protein
Sequence: ILFPDIIARA
Position: 112-121
Source molecule (GenBank): AAG38606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: MAP4K1
Chemical type: Peptide from protein
Sequence: ILINDAGEVRL
Position: 93-103
Source molecule (GenBank): EAW56801.1
Assay category: MhcLigandElution
Result: Positive

Epitope: NISCH-1A
Chemical type: Peptide from protein
Sequence: ALAPAPAEV
Position: 1050-1058
Source molecule (GenBank): NP_009115.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NISCH-1A
Chemical type: Peptide from protein
Sequence: ALAPAPAEV
Position: 1050-1058
Source molecule (GenBank): NP_009115.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NISCH-1A
Chemical type: Peptide from protein
Sequence: ALAPAPAEV
Position: 1050-1058
Source molecule (GenBank): NP_009115.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NISCH-1A
Chemical type: Peptide from protein
Sequence: ALAPAPAEV
Position: 1050-1058
Source molecule (GenBank): NP_009115.2
Assay category: MhcLigandElution
Result: Positive

Epitope: NISCH-1A
Chemical type: Peptide from protein
Sequence: ALAPAPAEV
Position: 1050-1058
Source molecule (GenBank): NP_009115.2
Assay category: MhcBinding
Result: Positive

Epitope: NUFIP1
Chemical type: Peptide from protein
Sequence: DTAPPRDSW
Position: 29-37
Source molecule (GenBank): NP_036477.2
Assay category: MhcLigandElution
Result: Positive

Epitope: NUFIP1
Chemical type: Peptide from protein
Sequence: DTAPPRDSW
Position: 29-37
Source molecule (GenBank): NP_036477.2
Assay category: MhcBinding
Result: Negative

Epitope: OR6C65
Chemical type: Peptide from protein
Sequence: YTLILKTIL
Position: 216-224
Source molecule (GenBank): NP_001005518.1
Assay category: MhcLigandElution
Result: Positive

Epitope: OR6C65
Chemical type: Peptide from protein
Sequence: YTLILKTIL
Position: 216-224
Source molecule (GenBank): NP_001005518.1
Assay category: MhcBinding
Result: Negative

Epitope: PARP10-1L
Chemical type: Peptide from protein
Sequence: GLLGQEGLVEI
Position: 37-47
Source molecule (GenBank): AAH19030.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PARP10-1L
Chemical type: Peptide from protein
Sequence: GLLGQEGLVEI
Position: 37-47
Source molecule (GenBank): AAH19030.2
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PARP10-1L
Chemical type: Peptide from protein
Sequence: GLLGQEGLVEI
Position: 37-47
Source molecule (GenBank): AAH19030.2
Assay category: MhcLigandElution
Result: Positive

Epitope: PARP10-1L
Chemical type: Peptide from protein
Sequence: GLLGQEGLVEI
Position: 37-47
Source molecule (GenBank): AAH19030.2
Assay category: MhcBinding
Result: Positive

Epitope: PEMT
Chemical type: Peptide from protein
Sequence: LSVTILL
Position: 56-62
Source molecule (GenBank): AAQ13425.1
Assay category: MhcLigandElution
Result: Positive

Epitope: PEMT
Chemical type: Peptide from protein
Sequence: LSVTILL
Position: 56-62
Source molecule (GenBank): AAQ13425.1
Assay category: MhcBinding
Result: Negative

Epitope: PLEK
Chemical type: Peptide from protein
Sequence: TEWIKAIQM
Position: 336-344
Source molecule (GenBank): 1408254A
Assay category: MhcLigandElution
Result: Positive

Epitope: PLEK
Chemical type: Peptide from protein
Sequence: TEWIKAIQM
Position: 336-344
Source molecule (GenBank): 1408254A
Assay category: MhcBinding
Result: Negative

Epitope: PRH1-1I
Chemical type: Peptide from protein
Sequence: MLAPEAVILVM
Position: 1-11
Source molecule (GenBank): BAJ83982.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PRH1-1I
Chemical type: Peptide from protein
Sequence: MLAPEAVILVM
Position: 1-11
Source molecule (GenBank): BAJ83982.1
Assay category: MhcLigandElution
Result: Positive

Epitope: PRH1-1I
Chemical type: Peptide from protein
Sequence: MLAPEAVILVM
Position: 1-11
Source molecule (GenBank): BAJ83982.1
Assay category: MhcBinding
Result: Positive

Epitope: RNASE8
Chemical type: Peptide from protein
Sequence: PLLLLLLGL
Position: 10-18
Source molecule (GenBank): NP_612204.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RNASE8
Chemical type: Peptide from protein
Sequence: PLLLLLLGL
Position: 10-18
Source molecule (GenBank): NP_612204.1
Assay category: MhcBinding
Result: Negative

Epitope: RPL19
Chemical type: Peptide from protein
Sequence: ILMEHIHKL
Position: 118-126
Source molecule (GenBank): AAN76335.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TARS
Chemical type: Peptide from protein
Sequence: GLADNTVIAKV
Position: 8-18
Source molecule (GenBank): EAX10803.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TRIM9-1L
Chemical type: Peptide from protein
Sequence: ATIGVLLDL
Position: 645-653
Source molecule (GenBank): AAG53492.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TRIM9-1L
Chemical type: Peptide from protein
Sequence: ATIGVLLDL
Position: 645-653
Source molecule (GenBank): AAG53492.1
Assay category: MhcBinding
Result: Positive

Epitope: TYK2-1L
Chemical type: Peptide from protein
Sequence: VMEYLPL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: TYK2-1L
Chemical type: Peptide from protein
Sequence: VMEYLPL
Assay category: MhcLigandElution
Result: Positive

Epitope: TYK2-1L
Chemical type: Peptide from protein
Sequence: VMEYLPL
Assay category: MhcBinding
Result: Positive

Epitope: UCRC-1I
Chemical type: Peptide from protein
Sequence: AIYDHINEGV
Position: 42-51
Source molecule (GenBank): AAF29115.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: UCRC-1I
Chemical type: Peptide from protein
Sequence: AIYDHINEGV
Position: 42-51
Source molecule (GenBank): AAF29115.1
Assay category: MhcLigandElution
Result: Positive

Epitope: UCRC-1I
Chemical type: Peptide from protein
Sequence: AIYDHINEGV
Position: 42-51
Source molecule (GenBank): AAF29115.1
Assay category: MhcBinding
Result: Positive

Epitope: USP31
Chemical type: Peptide from protein
Sequence: ATVIVSV
Assay category: MhcLigandElution
Result: Positive

Epitope: USP31
Chemical type: Peptide from protein
Sequence: ATVIVSV
Assay category: MhcBinding
Result: Negative

Epitope: ZNF610
Chemical type: Peptide from protein
Sequence: VQALLTI
Assay category: MhcLigandElution
Result: Positive

Epitope: ZNF610
Chemical type: Peptide from protein
Sequence: VQALLTI
Assay category: MhcBinding
Result: Negative

Epitope: CDC26-1S
Chemical type: Peptide from protein
Sequence: SVAGTQEVFV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CDC26-1S
Chemical type: Peptide from protein
Sequence: SVAGTQEVFV
Assay category: MhcBinding
Result: Positive

Epitope: CHRNA9-1L
Chemical type: Peptide from protein
Sequence: TFLKIILML
Assay category: MhcBinding
Result: Negative

Epitope: CMPK1-1I
Chemical type: Peptide from protein
Sequence: QIHIMVNL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CMPK1-1I
Chemical type: Peptide from protein
Sequence: QIHIMVNL
Assay category: MhcBinding
Result: Positive

Epitope: HIVEP1-1N
Chemical type: Peptide from protein
Sequence: SLPKHNVTI
Position: 1069-1077
Source molecule (GenBank): AAI40817.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: HIVEP1-1N
Chemical type: Peptide from protein
Sequence: SLPKHNVTI
Position: 1069-1077
Source molecule (GenBank): AAI40817.1
Assay category: MhcBinding
Result: Positive

Epitope: PARP10-1P
Chemical type: Peptide from protein
Sequence: GLPGQEGLVEI
Position: 397-407
Source molecule (GenBank): EAW82169.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PARP10-1P
Chemical type: Peptide from protein
Sequence: GLPGQEGLVEI
Position: 397-407
Source molecule (GenBank): EAW82169.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PARP10-1P
Chemical type: Peptide from protein
Sequence: GLPGQEGLVEI
Position: 397-407
Source molecule (GenBank): EAW82169.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PARP10-1P
Chemical type: Peptide from protein
Sequence: GLPGQEGLVEI
Position: 397-407
Source molecule (GenBank): EAW82169.1
Assay category: MhcBinding
Result: Positive

Epitope: PRH1-1S
Chemical type: Peptide from protein
Sequence: MLAPEAVSLVM
Position: 1-11
Source molecule (GenBank): BAJ83984.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PRH1-1S
Chemical type: Peptide from protein
Sequence: MLAPEAVSLVM
Position: 1-11
Source molecule (GenBank): BAJ83984.1
Assay category: MhcBinding
Result: Positive

Epitope: TRIM9-1F
Chemical type: Peptide from protein
Sequence: ATIGVLLDF
Position: 645-653
Source molecule (GenBank): AAG53490.1
Assay category: MhcBinding
Result: Positive

Epitope: TYK2-1V
Chemical type: Peptide from protein
Sequence: VMEYVPL
Position: 977-983
Source molecule (GenBank): NP_003322.3
Assay category: MhcBinding
Result: Positive

Epitope: UCRC-1V
Chemical type: Peptide from protein
Sequence: AIYDHVNEGV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: UCRC-1V
Chemical type: Peptide from protein
Sequence: AIYDHVNEGV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: UCRC-1V
Chemical type: Peptide from protein
Sequence: AIYDHVNEGV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: UCRC-1V
Chemical type: Peptide from protein
Sequence: AIYDHVNEGV
Assay category: MhcBinding
Result: Positive