Reference: J Marttila; S Juhela; O Vaarala; H Hyöty; M Roivainen; A Hinkkanen; P Vilja; O Simell; J Ilonen. "Responses of coxsackievirus B4-specific T-cell lines to 2C protein-characterization of epitopes with special reference to the GAD65 homology region." Virology (2001).

Epitope: CBV4 p1
Chemical type: Peptide from protein
Sequence: NNGWLKKFTEMTNACKGMEW
Position: 1099-1118
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p1
Chemical type: Peptide from protein
Sequence: NNGWLKKFTEMTNACKGMEW
Position: 1099-1118
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 339
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p2
Chemical type: Peptide from protein
Sequence: MTNACKGMEWIAVKIQKFIE
Position: 1109-1128
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p2
Chemical type: Peptide from protein
Sequence: MTNACKGMEWIAVKIQKFIE
Position: 1109-1128
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p3
Chemical type: Peptide from protein
Sequence: IAVKIQKFIEWLKVKILPEV
Position: 1119-1138
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p3
Chemical type: Peptide from protein
Sequence: IAVKIQKFIEWLKVKILPEV
Position: 1119-1138
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p4
Chemical type: Peptide from protein
Sequence: WLKVKILPEVKEKHEFLSRL
Position: 1129-1148
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p4
Chemical type: Peptide from protein
Sequence: WLKVKILPEVKEKHEFLSRL
Position: 1129-1148
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p5
Chemical type: Peptide from protein
Sequence: KEKHEFLSRLKQLPLLESQI
Position: 1139-1158
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p5
Chemical type: Peptide from protein
Sequence: KEKHEFLSRLKQLPLLESQI
Position: 1139-1158
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p6
Chemical type: Peptide from protein
Sequence: KQLPLLESQIATIEQSAPSQ
Position: 1149-1168
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p6
Chemical type: Peptide from protein
Sequence: KQLPLLESQIATIEQSAPSQ
Position: 1149-1168
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p7
Chemical type: Peptide from protein
Sequence: ATIEQSAPSQSDQEQLFSNV
Position: 1159-1178
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p7
Chemical type: Peptide from protein
Sequence: ATIEQSAPSQSDQEQLFSNV
Position: 1159-1178
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p8
Chemical type: Peptide from protein
Sequence: SDQEQLFSNVQYFAHYCRKY
Position: 1169-1188
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p8
Chemical type: Peptide from protein
Sequence: SDQEQLFSNVQYFAHYCRKY
Position: 1169-1188
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p9
Chemical type: Peptide from protein
Sequence: QYFAHYCRKYAPLYAAEAKR
Position: 1179-1198
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p9
Chemical type: Peptide from protein
Sequence: QYFAHYCRKYAPLYAAEAKR
Position: 1179-1198
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p10
Chemical type: Peptide from protein
Sequence: APLYAAEAKRVFSLEKKMSN
Position: 1189-1208
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p10
Chemical type: Peptide from protein
Sequence: APLYAAEAKRVFSLEKKMSN
Position: 1189-1208
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p11
Chemical type: Peptide from protein
Sequence: VFSLEKKMSNYIQFKSKCRI
Position: 1199-1218
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p11
Chemical type: Peptide from protein
Sequence: VFSLEKKMSNYIQFKSKCRI
Position: 1199-1218
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 349 353 339 343
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p12
Chemical type: Peptide from protein
Sequence: YIQFKSKCRIEPVCLLLHGS
Position: 1209-1228
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p12
Chemical type: Peptide from protein
Sequence: YIQFKSKCRIEPVCLLLHGS
Position: 1209-1228
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 349 353 339
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p13
Chemical type: Peptide from protein
Sequence: EPVCLLLHGSPGAGKSVATN
Position: 1219-1238
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p13
Chemical type: Peptide from protein
Sequence: EPVCLLLHGSPGAGKSVATN
Position: 1219-1238
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p14
Chemical type: Peptide from protein
Sequence: PGAGKSVATNLIGRSLAEKL
Position: 1229-1248
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p14
Chemical type: Peptide from protein
Sequence: PGAGKSVATNLIGRSLAEKL
Position: 1229-1248
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p15
Chemical type: Peptide from protein
Sequence: LIGRSLAEKLNSSVYSLPPD
Position: 1239-1258
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p15
Chemical type: Peptide from protein
Sequence: LIGRSLAEKLNSSVYSLPPD
Position: 1239-1258
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p16
Chemical type: Peptide from protein
Sequence: NSSVYSLPPDPDHFDGYKQQ
Position: 1249-1268
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p16
Chemical type: Peptide from protein
Sequence: NSSVYSLPPDPDHFDGYKQQ
Position: 1249-1268
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p17
Chemical type: Peptide from protein
Sequence: PDHFDGYKQQAVVIMDDLCQ
Position: 1259-1278
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p17
Chemical type: Peptide from protein
Sequence: PDHFDGYKQQAVVIMDDLCQ
Position: 1259-1278
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 349 327
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p18
Chemical type: Peptide from protein
Sequence: AVVIMDDLCQNPDGKDVSLF
Position: 1269-1288
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p18
Chemical type: Peptide from protein
Sequence: AVVIMDDLCQNPDGKDVSLF
Position: 1269-1288
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 341 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p20
Chemical type: Peptide from protein
Sequence: CQMVSSVDFVPPMAALEEKG
Position: 1289-1308
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p20
Chemical type: Peptide from protein
Sequence: CQMVSSVDFVPPMAALEEKG
Position: 1289-1308
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p22
Chemical type: Peptide from protein
Sequence: ILFTSPFVLASTNAGSINAP
Position: 1309-1328
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 349
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p22
Chemical type: Peptide from protein
Sequence: ILFTSPFVLASTNAGSINAP
Position: 1309-1328
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 339 341 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p23
Chemical type: Peptide from protein
Sequence: STNAGSINAPTVSDSRALAR
Position: 1319-1338
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p23
Chemical type: Peptide from protein
Sequence: STNAGSINAPTVSDSRALAR
Position: 1319-1338
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p24
Chemical type: Peptide from protein
Sequence: TVSDSRALARRFHFDMNIEV
Position: 1329-1348
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p24
Chemical type: Peptide from protein
Sequence: TVSDSRALARRFHFDMNIEV
Position: 1329-1348
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 349 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p25
Chemical type: Peptide from protein
Sequence: RFHFDMNIEVISMYSQNGKI
Position: 1339-1358
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p25
Chemical type: Peptide from protein
Sequence: RFHFDMNIEVISMYSQNGKI
Position: 1339-1358
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 349 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p26
Chemical type: Peptide from protein
Sequence: ISMYSQNGKINMPMSVKTCD
Position: 1349-1368
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p26
Chemical type: Peptide from protein
Sequence: ISMYSQNGKINMPMSVKTCD
Position: 1349-1368
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340 341 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p27
Chemical type: Peptide from protein
Sequence: NMPMSVKTCDEECCPVNFKR
Position: 1359-1378
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p27
Chemical type: Peptide from protein
Sequence: NMPMSVKTCDEECCPVNFKR
Position: 1359-1378
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p28
Chemical type: Peptide from protein
Sequence: EECCPVNFKRCCPLVCGKAI
Position: 1369-1388
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p28
Chemical type: Peptide from protein
Sequence: EECCPVNFKRCCPLVCGKAI
Position: 1369-1388
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p29
Chemical type: Peptide from protein
Sequence: CCPLVCGKAIQFIDRKTQVR
Position: 1379-1398
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p29
Chemical type: Peptide from protein
Sequence: CCPLVCGKAIQFIDRKTQVR
Position: 1379-1398
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p30
Chemical type: Peptide from protein
Sequence: QFIDRKTQVRYSLDMLVTEM
Position: 1389-1408
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 327 340
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p30
Chemical type: Peptide from protein
Sequence: QFIDRKTQVRYSLDMLVTEM
Position: 1389-1408
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p31
Chemical type: Peptide from protein
Sequence: YSLDMLVTEMFREYNHRHSV
Position: 1399-1418
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
MHC allele types: 341 353
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p31
Chemical type: Peptide from protein
Sequence: YSLDMLVTEMFREYNHRHSV
Position: 1399-1418
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p33
Chemical type: Peptide from protein
Sequence: GATLEALFQGPPVYREIKIS
Position: 1419-1438
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV4 p33
Chemical type: Peptide from protein
Sequence: GATLEALFQGPPVYREIKIS
Position: 1419-1438
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CBV3 p4
Chemical type: Peptide from protein
Sequence: WLKVKILPEVREKHEFLNRL
Position: 1131-1150
Source molecule (GenBank): AAA74400.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: truncated CBV4 p4 (12-mer)
Chemical type: Peptide from protein
Sequence: KILPEVKEKHEF
Position: 1133-1144
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: truncated CBV4 p4 (12-mer)
Chemical type: Peptide from protein
Sequence: KILPEVKEKHEF
Position: 1133-1144
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: truncated CBV4 p4 (12-mer)
Chemical type: Peptide from protein
Sequence: KILPEVKEKHEF
Position: 1133-1144
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: truncated CBV4 p4 (12-mer)
Chemical type: Peptide from protein
Sequence: KILPEVKEKHEF
Position: 1133-1144
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: truncated CBV4 p4 (12-mer)
Chemical type: Peptide from protein
Sequence: KILPEVKEKHEF
Position: 1133-1144
Source molecule (GenBank): P08292.4
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GAD65 peptide 1
Chemical type: Peptide from protein
Sequence: IARFKMFPEVKEKGMAALPR
Position: 253-272
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GAD65 peptide 2
Chemical type: Peptide from protein
Sequence: KMFPEVKEKGMAALPRLIAF
Position: 257-276
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GAD65 peptide 3
Chemical type: Peptide from protein
Sequence: NMYAMMIARFKMFPEVKEKG
Position: 247-266
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated