LiteFold/IEDB huggingface dataset:
Reference: Bo-Seong Jeong; Joon Young Jeon; Chih-Jen Lai; Hye-Yeoung Yun; Jae U Jung; Byung-Ha Oh. "Structural basis for the broad and potent cross-reactivity of an N501Y-centric antibody against sarbecoviruses." Frontiers in immunology (2022).

Epitope: Epitope of Fab D27LEY on SARS-CoV2 Alpha RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, F371, S372, T373, K375, R400, G401, D402, V404, R405, V430, N436, G493, F494, Q495, P496, T497, Y498, G499, V500, G501, Y502, Q503, Y505
Source molecule (GenBank): QWA53375.2
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab D27LEY on SARS-CoV2 Alpha RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, F371, S372, T373, K375, R400, G401, D402, V404, R405, V430, N436, G493, F494, Q495, P496, T497, Y498, G499, V500, G501, Y502, Q503, Y505
Source molecule (GenBank): QWA53375.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.37

Epitope: Epitope of Fab D27LEY on SARS-CoV2 Alpha RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, F371, S372, T373, K375, R400, G401, D402, V404, R405, V430, N436, G493, F494, Q495, P496, T497, Y498, G499, V500, G501, Y502, Q503, Y505
Source molecule (GenBank): QWA53375.2
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab D27LEY on SARS-CoV2 Alpha RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, F371, S372, T373, K375, R400, G401, D402, V404, R405, V430, N436, G493, F494, Q495, P496, T497, Y498, G499, V500, G501, Y502, Q503, Y505
Source molecule (GenBank): QWA53375.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.51

Epitope: Epitope of Fab D27LEY on SARS-CoV2 Alpha RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, F371, S372, T373, K375, R400, G401, D402, V404, R405, V430, N436, G493, F494, Q495, P496, T497, Y498, G499, V500, G501, Y502, Q503, Y505
Source molecule (GenBank): QWA53375.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.34

Epitope: Epitope of Fab D27LEY on SARS-CoV2 Alpha RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, F371, S372, T373, K375, R400, G401, D402, V404, R405, V430, N436, G493, F494, Q495, P496, T497, Y498, G499, V500, G501, Y502, Q503, Y505
Source molecule (GenBank): QWA53375.2
Assay category: BCell
Result: Positive
Reference: Maria Pia Lenza; Leire Egia-Mendikute; Asier Antoñana-Vildosola; Cátia O Soares; Helena Coelho; Francisco Corzana; Alexandre Bosch; Prodhi Manisha; Jon Imanol Quintana; Iker Oyenarte; Luca Unione; María Jesús Moure; Mikel Azkargorta; Unai Atxabal; Klaudia Sobczak; Felix Elortza; James D Sutherland; Rosa Barrio; Filipa Marcelo; Jesús Jiménez-Barbero; Asis Palazon; June Ereño-Orbea. "Structural insights into Siglec-15 reveal glycosylation dependency for its interaction with T cells through integrin CD11b." Nature communications (2023).

Epitope: Epitope of Fab 5G12 on Siglec-15 ECD
Chemical type: Discontinuous protein residues
Discontinuous residues: R43, W44, P50, E85, P86, Y87, A88, R139, F141, H151, Y154, R157, H158, G159
Source molecule (GenBank): Q6ZMC9.1
Assay category: BCell
Result: Positive
Quantitative measurement: 272000.0

Epitope: Epitope of Fab 5G12 on Siglec-15 ECD
Chemical type: Discontinuous protein residues
Discontinuous residues: R43, W44, P50, E85, P86, Y87, A88, R139, F141, H151, Y154, R157, H158, G159
Source molecule (GenBank): Q6ZMC9.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0000010

Epitope: Epitope of Fab 5G12 on Siglec-15 ECD
Chemical type: Discontinuous protein residues
Discontinuous residues: R43, W44, P50, E85, P86, Y87, A88, R139, F141, H151, Y154, R157, H158, G159
Source molecule (GenBank): Q6ZMC9.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Fab 5G12 on Siglec-15 ECD
Chemical type: Discontinuous protein residues
Discontinuous residues: R43, W44, P50, E85, P86, Y87, A88, R139, F141, H151, Y154, R157, H158, G159
Source molecule (GenBank): Q6ZMC9.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.1

Epitope: Epitope of Fab 5G12 on Siglec-15 ECD
Chemical type: Discontinuous protein residues
Discontinuous residues: R43, W44, P50, E85, P86, Y87, A88, R139, F141, H151, Y154, R157, H158, G159
Source molecule (GenBank): Q6ZMC9.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.68
Reference: Shamchal Bakavayev; Alexandra Stavsky; Shirel Argueti-Ostrovsky; Galit Yehezkel; Yael Fridmann-Sirkis; Zeev Barak; Daniel Gitler; Adrian Israelson; Stanislav Engel. "Blocking an epitope of misfolded SOD1 ameliorates disease phenotype in a model of amyotrophic lateral sclerosis." Brain : a journal of neurology (2023).

Epitope: Epitope of mAb SE-21 on hSOD-1
Chemical type: Peptide from protein
Sequence: SVISLSGDH
Position: 103-111
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb SE-21 on hSOD-1
Chemical type: Peptide from protein
Sequence: SVISLSGDH
Position: 103-111
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive
Quantitative measurement: 494.0

Epitope: Epitope of mAb SE-21 on hSOD-1
Chemical type: Peptide from protein
Sequence: SVISLSGDH
Position: 103-111
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.079

Epitope: Epitope of mAb SE-21 on hSOD-1
Chemical type: Peptide from protein
Sequence: SVISLSGDH
Position: 103-111
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive
Quantitative measurement: 160000.0

Epitope: Epitope of mAb SE-21 on hSOD-1
Chemical type: Peptide from protein
Sequence: SVISLSGDH
Position: 103-111
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive
Reference: Elena Piletska; Philippe Veron; Bérangère Bertin; Federico Mingozzi; Donald Jones; Rachel L Norman; Joseph Earley; Kal Karim; Alvaro Garcia-Cruz; Sergey Piletsky. "Analysis of Adeno-Associated Virus Serotype 8 (AAV8)-antibody complexes using epitope mapping by molecular imprinting leads to the identification of Fab peptides that potentially evade AAV8 neutralisation." Nanomedicine : nanotechnology, biology, and medicine (2023).

Epitope: Epitope 1 (P7)
Chemical type: Peptide from protein
Sequence: LFNIQVK
Position: 318-324
Source molecule (GenBank): YP_077180.1
Assay category: BCell
Result: Positive

Epitope: Epitope 2 (P8/P9)
Chemical type: Peptide from protein
Sequence: TNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNR
Position: 571-612
Source molecule (GenBank): YP_077180.1
Assay category: BCell
Result: Positive

Epitope: Epitope 3 (P10)
Chemical type: Peptide from protein
Sequence: YLTRNL
Position: 733-738
Source molecule (GenBank): YP_077180.1
Assay category: BCell
Result: Positive
Reference: Christopher M Bartley; Thomas T Ngo; Cathryn R Cadwell; Adil Harroud; Ryan D Schubert; Bonny D Alvarenga; Isobel A Hawes; Kelsey C Zorn; Trung Hunyh; Lindsay H Teliska; Andrew F Kung; Shailee Shah; Jeffrey M Gelfand; Felicia C Chow; Matthew N Rasband; Divyanshu Dubey; Sean J Pittock; Joseph L DeRisi; Michael R Wilson; Samuel J Pleasure. "Dual ankyrinG and subpial autoantibodies in a man with well-controlled HIV infection with steroid-responsive meningoencephalitis: A case report." Frontiers in neurology (2022).

Epitope: AnkG 937-958
Chemical type: Peptide from protein
Sequence: IEELLVPSKEQHLTFTREFDSD
Position: 937-958
Source molecule (GenBank): 608025
Assay category: BCell
Result: Positive
Host: M 51 years
Reference: Kenneth C Childers; Nathan G Avery; Kevin A Estrada Alamo; Omar Davulcu; Rose Marie Haynes; Pete Lollar; Christopher B Doering; Carmen H Coxon; P Clint Spiegel. "Structure of coagulation factor VIII bound to a patient-derived anti-C1 domain antibody inhibitor." Blood (2023).

Epitope: Epitope of NB33 Fab on Factor VIII
Chemical type: Discontinuous protein residues
Discontinuous residues: R2109, K2111, F2112, S2113, I2177
Source molecule (GenBank): P00451.1
Assay category: BCell
Result: Positive

Epitope: Epitope of NB33 Fab on Factor VIII
Chemical type: Discontinuous protein residues
Discontinuous residues: R2109, K2111, F2112, S2113, I2177
Source molecule (GenBank): P00451.1
Assay category: BCell
Result: Positive
Reference: Sushma Anand; Dene R Littler; Jesse I Mobbs; Asolina Braun; Daniel G Baker; Luke Tennant; Anthony W Purcell; Julian P Vivian; Jamie Rossjohn. "Complimentary electrostatics dominate T-cell receptor binding to a psoriasis-associated peptide antigen presented by human leukocyte antigen C∗06:02." The Journal of biological chemistry (2023).

Epitope: ADAMTSL5
Chemical type: Peptide from protein
Sequence: VRSRRCLRL
Position: 67-75
Source molecule (GenBank): Q6ZMM2.3
Assay category: TCell
Result: Positive
Cell type: lymphocyte
Tissue: blood
Culture conditions: Engineered

Epitope: ADAMTSL5
Chemical type: Peptide from protein
Sequence: VRSRRCLRL
Position: 67-75
Source molecule (GenBank): Q6ZMM2.3
Assay category: TCell
Result: Positive
Quantitative measurement: 2.9

Epitope: ADAMTSL5
Chemical type: Peptide from protein
Sequence: VRSRRCLRL
Position: 67-75
Source molecule (GenBank): Q6ZMM2.3
Assay category: TCell
Result: Positive
Quantitative measurement: 11000.0

Epitope: ADAMTSL5
Chemical type: Peptide from protein
Sequence: VRSRRCLRL
Position: 67-75
Source molecule (GenBank): Q6ZMM2.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.9
Reference: Siddhartha Sharma; Xuqian Tan; Josh Boyer; Don Clarke; Anne Costanzo; Brian Abe; Lisa Kain; Marie Holt; Adrienne Armstrong; Marynette Rihanek; Andrew Su; Cate Speake; Peter Gottlieb; Michael Gottschalk; Jeremy Pettus; Luc Teyton. "Measuring anti-islet autoimmunity in mouse and human by profiling peripheral blood antigen-specific CD4 T cells." Science translational medicine (2023).

Epitope: Ins 13-21
Chemical type: Peptide from protein
Sequence: EALYLVCGE
Position: 37-45
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Ins 13-21
Chemical type: Peptide from protein
Sequence: EALYLVCGE
Position: 37-45
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  26-57 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Ins 13-21
Chemical type: Peptide from protein
Sequence: EALYLVCGE
Position: 37-45
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  5-62 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Ins 13-21
Chemical type: Peptide from protein
Sequence: EALYLVCGE
Position: 37-45
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  16-21 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP 59-70
Chemical type: Peptide from protein
Sequence: EDLQVGQVELGG
Position: 59-70
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  5-62 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP 59-70
Chemical type: Peptide from protein
Sequence: EDLQVGQVELGG
Position: 59-70
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  26-57 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP 59-70
Chemical type: Peptide from protein
Sequence: EDLQVGQVELGG
Position: 59-70
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  16-21 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Yu Miao; Ziyan Shi; Wei Zhang; Lin Zhu; Shanshan Tang; Hongxi Chen; Xiaofei Wang; Qin Du; Shuaicheng Li; Ying Zhang; Wenqin Luo; Xin Jin; Mingyan Fang; Hongyu Zhou. "Immune Repertoire Profiling Reveals Its Clinical Application Potential and Triggers for Neuromyelitis Optica Spectrum Disorders." Neurology® neuroimmunology & neuroinflammation (2023).

Epitope: CMV IE1 93-96
Chemical type: Peptide from protein
Sequence: LVKQIKVRVDMVRHRIKEHM
Position: 85-104
Source molecule (GenBank): A0A0G2T717.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV IE1 93-96
Chemical type: Peptide from protein
Sequence: LVKQIKVRVDMVRHRIKEHM
Position: 85-104
Source molecule (GenBank): A0A0G2T717.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Hannes Vietzen; Philipp B Staber; Sarah M Berger; Philippe L Furlano; Laura M Kühner; Simone Lubowitzki; Alexander Pichler; Robert Strassl; Jan J Cornelissen; Elisabeth Puchhammer-Stöckl. "Inhibitory NKG2A<sup>+</sup> and absent activating NKG2C<sup>+</sup> NK cell responses are associated with the development of EBV<sup>+</sup> lymphomas." Frontiers in immunology (2023).

Epitope: GTDPHLPTL
Chemical type: Peptide from protein
Sequence: GTDPHLPTL
Position: 371-379
Source molecule (GenBank): ARB50462.1
Assay category: MhcBinding
Result: Positive

Epitope: GGDPHLPTL
Chemical type: Peptide from protein
Sequence: GGDPHLPTL
Position: 354-362
Source molecule (GenBank): P03230.1
Assay category: MhcBinding
Result: Positive

Epitope: GGDPPLPTL
Chemical type: Peptide from protein
Sequence: GGDPPLPTL
Position: 360-368
Source molecule (GenBank): ARB50504.1
Assay category: MhcBinding
Result: Positive

Epitope: GIDPHLPTL
Chemical type: Peptide from protein
Sequence: GIDPHLPTL
Position: 354-362
Source molecule (GenBank): P13198.1
Assay category: MhcBinding
Result: Positive-Intermediate

Epitope: GCDPHLPTL
Chemical type: Peptide from protein
Sequence: GCDPHLPTL
Position: 371-379
Source molecule (GenBank): AFD33406.1
Assay category: MhcBinding
Result: Positive-Intermediate

Epitope: GDDPHLPTL
Chemical type: Peptide from protein
Sequence: GDDPHLPTL
Position: 360-368
Source molecule (GenBank): QAC42166.1
Assay category: MhcBinding
Result: Positive-Intermediate

Epitope: GGDPHVPTL
Chemical type: Peptide from protein
Sequence: GGDPHVPTL
Assay category: MhcBinding
Result: Positive-Low

Epitope: GSDPHLPTL
Chemical type: Peptide from protein
Sequence: GSDPHLPTL
Position: 151-159
Source molecule (GenBank): QAG29307.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: GGDPHLPPL
Chemical type: Peptide from protein
Sequence: GGDPHLPPL
Position: 140-148
Source molecule (GenBank): AEK70589.1
Assay category: MhcBinding
Result: Positive-Low

Epitope: GGDTPLPTL
Chemical type: Peptide from protein
Sequence: GGDTPLPTL
Assay category: MhcBinding
Result: Positive-Low
Reference: Rajat Kumar Singh; Emelie E Reuber; Mariolina Bruno; Mihai G Netea; Peter H Seeberger. "Synthesis of oligosaccharides to identify an immunologically active epitope against  infection." Chemical science (2023).

Epitope: 5-Aminopentyl β-D-mannopyranosyl-(1-2)-α-D-mannopyranoside_structure 19
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Reference: René Arredondo-Hernández; Alejandro Schcolnik-Cabrera; Patricia Orduña; Daniel Juárez-López; Tania Varela-Salinas; Yolanda López-Vidal. "Identification of peptides presented through the MHC-II of dendritic cells stimulated with Mycobacterium avium." Immunobiology (2023).

Epitope: Peptide A
Chemical type: Peptide from protein
Sequence: RDLSKGLLVRSLTRLRLKK
Assay category: MhcLigandElution
Result: Positive

Epitope: Peptide B
Chemical type: Peptide from protein
Sequence: LLPASVLLLLLLTLSNADNK
Assay category: MhcLigandElution
Result: Positive

Epitope: Peptide D
Chemical type: Peptide from protein
Sequence: RDSVRAVLNSLLLLTLLRLRLVNVLLVDN
Assay category: MhcLigandElution
Result: Positive
Reference: Matthew C Metcalf; Benjamin M Janus; Rui Yin; Ruixue Wang; Johnathan D Guest; Edwin Pozharski; Mansun Law; Roy A Mariuzza; Eric A Toth; Brian G Pierce; Thomas R Fuerst; Gilad Ofek. "Structure of engineered hepatitis C virus E1E2 ectodomain in complex with neutralizing antibodies." Nature communications (2023).

Epitope: Epitope of Fab HEPC74 on HCV 1b E1E2
Chemical type: Discontinuous protein residues
Discontinuous residues: L427, C429, N430, D431, S432, H434, T435, G436, L438, A440, Y443, H445, K446, F447, N448, W529, E531
Source molecule (GenBank): W5RMK0.1
Assay category: BCell
Result: Positive
Reference: Jinxin Li; Fengli Liu; Zhihao Ren; Guanghua Fu; Jizhen Shi; Naiyu Zhao; Yu Huang; Jingliang Su. "Generation of a monoclonal antibody against duck circovirus capsid protein and its potential application for native viral antigen detection." Frontiers in microbiology (2023).

Epitope: Epitope of mAb 4A2 on DuCV cap
Chemical type: Peptide from protein
Sequence: IDKDGQIV
Position: 144-151
Source molecule (GenBank): WIG62448.1
Assay category: BCell
Result: Positive
Host:  6-8 weeks

Epitope: Epitope of mAb 4A2 on DuCV cap
Chemical type: Peptide from protein
Sequence: IDKDGQIV
Position: 144-151
Source molecule (GenBank): WIG62448.1
Assay category: BCell
Result: Positive
Host:  6-8 weeks

Epitope: Epitope of mAb 4A2 on DuCV cap
Chemical type: Peptide from protein
Sequence: IDKDGQIV
Position: 144-151
Source molecule (GenBank): WIG62448.1
Assay category: BCell
Result: Positive
Host:  6-8 weeks

Epitope: Epitope of mAb 4A2 on DuCV cap
Chemical type: Peptide from protein
Sequence: IDKDGQIV
Position: 144-151
Source molecule (GenBank): WIG62448.1
Assay category: BCell
Result: Positive
Host:  6-8 weeks
Reference: Zhichao Zhang; Xiaoxiong Li; Ying Xue; Bo Yang; Yuanyuan Jia; Shichao Liu; Defen Lu. "The structure of the RBD-E77 Fab complex reveals neutralization and immune escape of SARS-CoV-2." Acta crystallographica. Section D, Structural biology (2023).

Chemical type: Discontinuous protein residues
Discontinuous residues: R403, E406, R408, Q409, T415, G416, K417, D420, Y449, Y453, L455, F456, Y489, Q493, S494, G496, Q498, T500, N501, G502, V503, G504, Y505
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Chemical type: Discontinuous protein residues
Discontinuous residues: R403, E406, R408, Q409, T415, G416, K417, D420, Y449, Y453, L455, F456, Y489, Q493, S494, G496, Q498, T500, N501, G502, V503, G504, Y505
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Chemical type: Discontinuous protein residues
Discontinuous residues: R403, E406, R408, Q409, T415, G416, K417, D420, Y449, Y453, L455, F456, Y489, Q493, S494, G496, Q498, T500, N501, G502, V503, G504, Y505
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Chemical type: Discontinuous protein residues
Discontinuous residues: R403, E406, R408, Q409, T415, G416, K417, D420, Y449, Y453, L455, F456, Y489, Q493, S494, G496, Q498, T500, N501, G502, V503, G504, Y505
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Chemical type: Discontinuous protein residues
Discontinuous residues: R403, E406, R408, Q409, T415, G416, K417, D420, Y449, Y453, L455, F456, Y489, Q493, S494, G496, Q498, T500, N501, G502, V503, G504, Y505
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.107
Host: F 6 weeks
Reference: Nan Huang; Qiaoli Lang; Liping Li; Liangpeng Ge; Xi Yang. "Characterization of monoclonal antibodies against porcine epidemic diarrhea virus S1/S2 junction protein." AMB Express (2023).

Epitope: PEDV S1S2J-C
Chemical type: Peptide from protein
Sequence: CKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLY
Position: 757-800
Source molecule (GenBank): AFQ37598.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PEDV S1S2J-C
Chemical type: Peptide from protein
Sequence: CKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLY
Position: 757-800
Source molecule (GenBank): AFQ37598.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PEDV S1S2J-C
Chemical type: Peptide from protein
Sequence: CKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLY
Position: 757-800
Source molecule (GenBank): AFQ37598.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PEDV S1S2J-C
Chemical type: Peptide from protein
Sequence: CKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLY
Position: 757-800
Source molecule (GenBank): AFQ37598.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PEDV S1S2J-C
Chemical type: Peptide from protein
Sequence: CKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLY
Position: 757-800
Source molecule (GenBank): AFQ37598.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: PEDV S1S2J-C
Chemical type: Peptide from protein
Sequence: CKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLY
Position: 757-800
Source molecule (GenBank): AFQ37598.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Zengchao Sun; Lu Wang; Lingyun Li; Yili Sun; Daizhou Zhang; Siyu Zhou; Yuying Li; Xiyang Li; Huarui Qiao; Qianqian Cui; Zhongyun Lan; Xiangjing Meng; Jianfeng Xu; Yong Geng; Yuanyuan Dai. "Structure basis of two nanobodies neutralizing SARS-CoV-2 Omicron variant by targeting ultra-conservative epitopes." Journal of structural biology (2023).

Epitope: Epitope of VHH NB1C6 on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: A352, W353, N354, R355, R357, Y396, R457, K462, P463, F464, E465, R466, D467, I468, E516
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.04

Epitope: Epitope of VHH NB1C6 on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: A352, W353, N354, R355, R357, Y396, R457, K462, P463, F464, E465, R466, D467, I468, E516
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.94

Epitope: Epitope of VHH NB1C6 on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: A352, W353, N354, R355, R357, Y396, R457, K462, P463, F464, E465, R466, D467, I468, E516
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 5.07

Epitope: Epitope of VHH NB1B5 on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y369, N370, S371, A372, F374, S375, T376, F377, K378, C379, Y380, S383, P384, V407, R408
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.76

Epitope: Epitope of VHH NB1B5 on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y369, N370, S371, A372, F374, S375, T376, F377, K378, C379, Y380, S383, P384, V407, R408
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of VHH NB1B5 on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y369, N370, S371, A372, F374, S375, T376, F377, K378, C379, Y380, S383, P384, V407, R408
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.94
Reference: Michael J Rudolph; Simon A Davis; H M Emranul Haque; Monir Ejemel; Lisa A Cavacini; David J Vance; Graham G Willsey; Carol Lyn Piazza; David D Weis; Yang Wang; Nicholas J Mantis. "Structure of a transmission blocking antibody in complex with Outer surface protein A from the Lyme disease spirochete, Borreliella burgdorferi." Proteins (2023).

Epitope: Epitope of 319-44 Fab on OspA
Chemical type: Discontinuous protein residues
Discontinuous residues: N228, K230, D249, S250, N251, T253, K254, L255, E256, G257, S258
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 319-44 Fab on OspA
Chemical type: Discontinuous protein residues
Discontinuous residues: N228, K230, D249, S250, N251, T253, K254, L255, E256, G257, S258
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.25

Epitope: Epitope of 319-44 Fab on OspA
Chemical type: Discontinuous protein residues
Discontinuous residues: N228, K230, D249, S250, N251, T253, K254, L255, E256, G257, S258
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 319-44 Fab on OspA
Chemical type: Discontinuous protein residues
Discontinuous residues: N228, K230, D249, S250, N251, T253, K254, L255, E256, G257, S258
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive