LiteFold/IEDB huggingface dataset:
Reference: Arne Homann; Niels Röckendorf; Arno Kromminga; Andreas Frey; Uta Jappe. "B cell epitopes on infliximab identified by oligopeptide microarray with unprocessed patient sera." Journal of translational medicine (2015).

Epitope: IFX1
Chemical type: Peptide from protein
Sequence: NHWMNWVRQSPEKGL
Assay category: BCell
Result: Negative

Epitope: IFX1
Chemical type: Peptide from protein
Sequence: NHWMNWVRQSPEKGL
Assay category: BCell
Result: Positive
Host:  4-80 years

Epitope: IFX2
Chemical type: Peptide from protein
Sequence: EDTGVYYCSRNYYGS
Assay category: BCell
Result: Positive

Epitope: IFX2
Chemical type: Peptide from protein
Sequence: EDTGVYYCSRNYYGS
Assay category: BCell
Result: Positive
Host:  4-80 years

Epitope: IFX4
Chemical type: Peptide from protein
Sequence: YCQQSHSWPFTFGSG
Assay category: BCell
Result: Negative

Epitope: IFX4
Chemical type: Peptide from protein
Sequence: YCQQSHSWPFTFGSG
Assay category: BCell
Result: Positive
Host:  4-80 years
Reference: Flavia Chiuppesi; Felix Wussow; Erica Johnson; Chao Bian; Meng Zhuo; Augustine Rajakumar; Peter A Barry; William J Britt; Rana Chakraborty; Don J Diamond. "Vaccine-Derived Neutralizing Antibodies to the Human Cytomegalovirus gH/gL Pentamer Potently Block Primary Cytotrophoblast Infection." Journal of virology (2015).

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive-Low

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive-Low

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Negative

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Negative

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive

Epitope: gH (34-43)
Chemical type: Peptide from protein
Sequence: LDPHAFHLLL
Position: 34-43
Source molecule (GenBank): P12824.1
Assay category: BCell
Result: Positive
Reference: Andris Dishlers; Dace Skrastina; Regina Renhofa; Ivars Petrovskis; Velta Ose; Ilva Lieknina; Juris Jansons; Paul Pumpens; Irina Sominskaya. "The Hepatitis B Virus Core Variants that Expose Foreign C-Terminal Insertions on the Outer Surface of Virus-Like Particles." Molecular biotechnology (2015).

Epitope: HBV S1 (31-35)
Chemical type: Peptide from protein
Sequence: DPAFR
Position: 31-35
Source molecule (GenBank): CAA06359.1
Assay category: BCell
Result: Positive-Low
Host: F 6-8 weeks

Epitope: HBV S1 (31-35)
Chemical type: Peptide from protein
Sequence: DPAFR
Position: 31-35
Source molecule (GenBank): CAA06359.1
Assay category: BCell
Result: Positive

Epitope: HBV S1 (20-47)
Chemical type: Peptide from protein
Sequence: NPLGFFPDHQLDPAFRANTANPDWDFNP
Position: 20-47
Source molecule (GenBank): CAA06359.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: HBV S1 (20-47)
Chemical type: Peptide from protein
Sequence: NPLGFFPDHQLDPAFRANTANPDWDFNP
Position: 20-47
Source molecule (GenBank): CAA06359.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Mohamed Abdel-Fattah; Ragia Charmy; Abdel-Rahman Tawfik. "Immune Reactivity of Synthetic Peptides Originated from Hypervariable Region 1 of Hepatitis C Synthetic Consensuses with Egyptian Sera Infected with Hepatitis C Virus Type 4." Intervirology (2015).

Epitope: MB1
Chemical type: Peptide, no natural source
Sequence: QTTVVGGSQSHTVRGLTSLFSLGPQQK
Assay category: BCell
Result: Positive-Low

Epitope: MB1
Chemical type: Peptide, no natural source
Sequence: QTTVVGGSQSHTVRGLTSLFSLGPQQK
Assay category: BCell
Result: Positive

Epitope: MB2
Chemical type: Peptide, no natural source
Sequence: QTHTTGGVQGHATSGLTSLFSPGPSQK
Assay category: BCell
Result: Positive

Epitope: MB2
Chemical type: Peptide, no natural source
Sequence: QTHTTGGVQGHATSGLTSLFSPGPSQK
Assay category: BCell
Result: Positive-Low

Epitope: MB3
Chemical type: Peptide, no natural source
Sequence: QTHTTGGQAGHQARSLTGLFSPGAKQN
Assay category: BCell
Result: Positive

Epitope: MB3
Chemical type: Peptide, no natural source
Sequence: QTHTTGGQAGHQARSLTGLFSPGAKQN
Assay category: BCell
Result: Positive-Low

Epitope: MB4
Chemical type: Peptide, no natural source
Sequence: STHVTGGAAGRTTSGFTSLFTPGPSQK
Assay category: BCell
Result: Positive

Epitope: MB4
Chemical type: Peptide, no natural source
Sequence: STHVTGGAAGRTTSGFTSLFTPGPSQK
Assay category: BCell
Result: Positive-Low
Reference: Zhiqiang Ku; Xiaohua Ye; Jinping Shi; Xiaoli Wang; Qingwei Liu; Zhong Huang. "Single Neutralizing Monoclonal Antibodies Targeting the VP1 GH Loop of Enterovirus 71 Inhibit both Virus Attachment and Internalization during Viral Entry." Journal of virology (2015).

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Quantitative measurement: 7.2
Host: F

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Host: F

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Quantitative measurement: 7.3
Host: F

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Quantitative measurement: 8.0
Host: F

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Host: F

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Host: F

Epitope: VP1 (211-220)
Chemical type: Peptide from protein
Sequence: FGEHKQEKDL
Position: 211-220
Source molecule (GenBank): ADB77848.1
Assay category: BCell
Result: Positive
Host: F
Reference: Malgorzata Gierynska; Lidia Szulc-Dabrowska; Tomasz Dzieciatkowski; Anna Golke; Ada Schollenberger. "The generation of CD8+ T-cell population specific for vaccinia virus epitope involved in the antiviral protection against ectromelia virus challenge." Pathogens and disease (2015).

Epitope: VACV B8R 20-27
Chemical type: Peptide from protein
Sequence: TSYKFESV
Position: 20-27
Source molecule (GenBank): ABP52447.1
Assay category: TCell
Result: Positive
Host: M 8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: VACV B8R 20-27
Chemical type: Peptide from protein
Sequence: TSYKFESV
Position: 20-27
Source molecule (GenBank): ABP52447.1
Assay category: TCell
Result: Positive
Host: M 8 weeks

Epitope: VACV B8R 20-27
Chemical type: Peptide from protein
Sequence: TSYKFESV
Position: 20-27
Source molecule (GenBank): ABP52447.1
Assay category: TCell
Result: Positive
Host: M 8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: VACV B8R 20-27
Chemical type: Peptide from protein
Sequence: TSYKFESV
Position: 20-27
Source molecule (GenBank): ABP52447.1
Assay category: TCell
Result: Positive
Host: M 8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: J N Mahlangu; K N Weldingh; S R Lentz; S Kaicker; F A Karim; T Matsushita; M Recht; W Tomczak; J Windyga; S Ehrenforth; K Knobe. "Changes in the amino acid sequence of the recombinant human factor VIIa analog, vatreptacog alfa, are associated with clinical immunogenicity." Journal of thrombosis and haemostasis : JTH (2015).

Epitope: Factor VIIa mutations
Chemical type: Discontinuous protein residues
Discontinuous residues: V218, E356, M358
Source molecule (GenBank): AAA51983.1
Assay category: BCell
Result: Positive
Host: M >12 years
Reference: Eleni I Kampylafka; Harry Alexopoulos; Avraam El Hamidieh; Marinos C Dalakas; Evangelos Andreakos; Athanasios G Tzioufas. "Immunization of mice with a peptide derived from the HTLV-1 TAX1BP1 protein induces cross-reactive antibodies against aquaporin 4." Autoimmunity (2015).

Epitope: TAX1BP1pep 219-233
Chemical type: Peptide from protein
Sequence: EFKKRFSDATSKAHQ
Position: 219-233
Source molecule (GenBank): Q86VP1.2
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: TAX1BP1pep 219-233
Chemical type: Peptide from protein
Sequence: EFKKRFSDATSKAHQ
Position: 219-233
Source molecule (GenBank): Q86VP1.2
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: TAX1BP1pep 219-233
Chemical type: Peptide from protein
Sequence: EFKKRFSDATSKAHQ
Position: 219-233
Source molecule (GenBank): Q86VP1.2
Assay category: BCell
Result: Negative
Host: F 6-8 weeks

Epitope: TAX1BP1pep 219-233
Chemical type: Peptide from protein
Sequence: EFKKRFSDATSKAHQ
Position: 219-233
Source molecule (GenBank): Q86VP1.2
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: TAX1BP1pep 219-233
Chemical type: Peptide from protein
Sequence: EFKKRFSDATSKAHQ
Position: 219-233
Source molecule (GenBank): Q86VP1.2
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: AQPpep8 252-275
Chemical type: Peptide from protein
Sequence: FCPDVEFKRRFKEAFSKAAQQTKG
Position: 252-275
Source molecule (GenBank): P55087.2
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Sophie M Lehar; Thomas Pillow; Min Xu; Leanna Staben; Kimberly K Kajihara; Richard Vandlen; Laura DePalatis; Helga Raab; Wouter L Hazenbos; J Hiroshi Morisaki; Janice Kim; Summer Park; Martine Darwish; Byoung-Chul Lee; Hilda Hernandez; Kelly M Loyet; Patrick Lupardus; Rina Fong; Donghong Yan; Cecile Chalouni; Elizabeth Luis; Yana Khalfin; Emile Plise; Jonathan Cheong; Joseph P Lyssikatos; Magnus Strandh; Klaus Koefoed; Peter S Andersen; John A Flygare; Man Wah Tan; Eric J Brown; Sanjeev Mariathasan. "Novel antibody-antibiotic conjugate eliminates intracellular S. aureus." Nature (2015).

Epitope: Epitope of 4497 Fab on S. aureus wall teichoic acid fragment (WTA)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: Epitope of 4497 Fab on S. aureus wall teichoic acid fragment (WTA)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 1.72

Epitope: Epitope of 4497 Fab on S. aureus wall teichoic acid fragment (WTA)
Chemical type: Carbohydrate
Assay category: BCell
Result: Negative

Epitope: Epitope of 4497 Fab on S. aureus wall teichoic acid fragment (WTA)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Reference: Jason Porta; Vidya Mangala Prasad; Cheng-I Wang; Wataru Akahata; Lisa F P Ng; Michael G Rossmann. "Structural Studies of Chikungunya Virus-Like Particles Complexed with Human Antibodies: Neutralization and Cell-to-Cell Transmission." Journal of virology (2016).

Epitope: Epitope of 5F10 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: K200, G204, G205, S206, E208, K215, V216, I217, N218, N219
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 8B10 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: F6, N7, V8, Y9, K10, T12, T58, D59, D60, S61, H62, N193, G194, Q195, H232, K234
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive
Reference: Ryan J Blackler; Dylan W Evans; David F Smith; Richard D Cummings; Cory L Brooks; Thomas Braulke; Xinyu Liu; Stephen V Evans; Sven Müller-Loennies. "Single-chain antibody-fragment M6P-1 possesses a mannose 6-phosphate monosaccharide-specific binding pocket that distinguishes N-glycan phosphorylation in a branch-specific manner†." Glycobiology (2016).

Epitope: mannose-6-phosphate (Man6P)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: mannose-6-phosphate (Man6P)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: mannose-6-phosphate (Man6P)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 2.72

Epitope: mannose-6-phosphate (Man6P)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: mannose-6-phosphate (Man6P)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Reference: Takatoshi Arakawa; Takami Kobayashi-Yurugi; Yilmaz Alguel; Hiroko Iwanari; Hinako Hatae; Momi Iwata; Yoshito Abe; Tomoya Hino; Chiyo Ikeda-Suno; Hiroyuki Kuma; Dongchon Kang; Takeshi Murata; Takao Hamakubo; Alexander D Cameron; Takuya Kobayashi; Naotaka Hamasaki; So Iwata. "Crystal structure of the anion exchanger domain of human erythrocyte band 3." Science (New York, N.Y.) (2015).

Epitope: Epitope of Fab 4201 on anion exchanger domain of Band 3
Chemical type: Discontinuous protein residues
Discontinuous residues: E429, R432, N433, E480, T481, N482, G483, L484, E485, L655, R656, S657, E658, P660, W662
Source molecule (GenBank): P02730.3
Assay category: BCell
Result: Positive
Quantitative measurement: 3.5
Reference: Feng Long; Rachel H Fong; Stephen K Austin; Zhenguo Chen; Thomas Klose; Andrei Fokine; Yue Liu; Jason Porta; Gopal Sapparapu; Wataru Akahata; Benjamin J Doranz; James E Crowe; Michael S Diamond; Michael G Rossmann. "Cryo-EM structures elucidate neutralizing mechanisms of anti-chikungunya human monoclonal antibodies with therapeutic activity." Proceedings of the National Academy of Sciences of the United States of America (2015).

Epitope: Epitope of 4J21 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: N7, V8, K10, A11, D59, D60, H62, E166, V169, M171, G194, T212, H232, K234, W235, R251, K252, G253, K254, I255
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 4J21 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: N7, V8, K10, A11, D59, D60, H62, E166, V169, M171, G194, T212, H232, K234, W235, R251, K252, G253, K254, I255
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 4J21 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: N7, V8, K10, A11, D59, D60, H62, E166, V169, M171, G194, T212, H232, K234, W235, R251, K252, G253, K254, I255
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 5M16 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: N7, V8, K10, A11, R13, K57, T58, D59, D60, S61, D63, K66, H73, M74, P75, A76, D77, V169, M171, N193, G194, Q195, V229, N231, H232, K233, K234, W235, G253
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 5M16 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: N7, V8, K10, A11, R13, K57, T58, D59, D60, S61, D63, K66, H73, M74, P75, A76, D77, V169, M171, N193, G194, Q195, V229, N231, H232, K233, K234, W235, G253
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 5M16 Fab on Chikungunya virus E2 protein
Chemical type: Discontinuous protein residues
Discontinuous residues: N7, V8, K10, A11, R13, K57, T58, D59, D60, S61, D63, K66, H73, M74, P75, A76, D77, V169, M171, N193, G194, Q195, V229, N231, H232, K233, K234, W235, G253
Source molecule (GenBank): AEJ18140.1
Assay category: BCell
Result: Positive
Reference: Farhat Khan; Mike Porter; Robert Schwenk; Margot DeBot; Philippe Saudan; Sheetij Dutta. "Head-to-Head Comparison of Soluble vs. Qβ VLP Circumsporozoite Protein Vaccines Reveals Selective Enhancement of NANP Repeat Responses." PloS one (2015).

Epitope: CSP NANP
Chemical type: Peptide from protein
Sequence: NANP
Position: 124-127
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Ji-Min Ju; Min Bum Kim; Su Jeong Ryu; Joo Young Kim; Jun Chang; Eun Young Choi. "Selection of Thymocytes Expressing Transgenic TCR Specific for a Minor Histocompatibility Antigen, H60." Immune network (2015).

Epitope: H60 (39-46)
Chemical type: Peptide from protein
Sequence: LTFNYRNL
Position: 39-46
Source molecule (GenBank): AAC63305.1
Assay category: TCell
Result: Positive-Low
Host:  8 weeks
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: H60 (39-46)
Chemical type: Peptide from protein
Sequence: LTFNYRNL
Position: 39-46
Source molecule (GenBank): AAC63305.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: H60 (39-46)
Chemical type: Peptide from protein
Sequence: LTFNYRNL
Position: 39-46
Source molecule (GenBank): AAC63305.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OVA (257-264)
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 257-264
Source molecule (GenBank): 0705172A
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: H60H
Chemical type: Peptide, no natural source
Sequence: LTFHYRNL
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: H60H
Chemical type: Peptide, no natural source
Sequence: LTFHYRNL
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Yu-Lei Gao; Yan-Fen Chai; Ning Dong; Su Han; Xiao-Mei Zhu; Qing-Hong Zhang; Yong-Ming Yao. "Tuftsin-derived T-peptide prevents cellular immunosuppression and improves survival rate in septic mice." Scientific reports (2015).

Epitope: T-peptide 289-292
Chemical type: Peptide from protein
Sequence: TKPR
Position: 71-74
Source molecule (GenBank): CAA04843.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks

Epitope: T-peptide 289-292
Chemical type: Peptide from protein
Sequence: TKPR
Position: 71-74
Source molecule (GenBank): CAA04843.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Non-antigen specific activation

Epitope: T-peptide 289-292
Chemical type: Peptide from protein
Sequence: TKPR
Position: 71-74
Source molecule (GenBank): CAA04843.1
Assay category: TCell
Result: Negative
Host: M 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Non-antigen specific activation

Epitope: T-peptide 289-292
Chemical type: Peptide from protein
Sequence: TKPR
Position: 71-74
Source molecule (GenBank): CAA04843.1
Assay category: TCell
Result: Negative
Host: M 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Non-antigen specific activation
Reference: Takao Fujisawa; Namiko Yamaguchi; Hisae Kadowaki; Yuka Tsukamoto; Naomi Tsuburaya; Atsushi Tsubota; Hiromitsu Takahashi; Isao Naguro; Yuji Takahashi; Jun Goto; Shoji Tsuji; Hideki Nishitoh; Kengo Homma; Hidenori Ichijo. "A systematic immunoprecipitation approach reinforces the concept of common conformational alterations in amyotrophic lateral sclerosis-linked SOD1 mutants." Neurobiology of disease (2015).

Epitope: SOD1 (8-14)
Chemical type: Peptide from protein
Sequence: LKGDGPV
Position: 9-15
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive

Epitope: SOD1 (8-14)
Chemical type: Peptide from protein
Sequence: LKGDGPV
Position: 9-15
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive

Epitope: SOD1 (32-40)
Chemical type: Peptide from protein
Sequence: WGSIKGLTE
Position: 33-41
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive

Epitope: SOD1 (32-40)
Chemical type: Peptide from protein
Sequence: WGSIKGLTE
Position: 33-41
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive

Epitope: SOD1 (32-40)
Chemical type: Peptide from protein
Sequence: WGSIKGLTE
Position: 33-41
Source molecule (GenBank): P00441.2
Assay category: BCell
Result: Positive
Reference: Na Tian; Daniel A Leffler; Ciaran P Kelly; Joshua Hansen; Eric V Marietta; Joseph A Murray; Detlef Schuppan; Eva J Helmerhorst. "Despite sequence homologies to gluten, salivary proline-rich proteins do not elicit immune responses central to the pathogenesis of celiac disease." American journal of physiology. Gastrointestinal and liver physiology (2015).

Epitope: PRB1-pep1
Chemical type: Peptide from protein
Sequence: APPAGQPQGPPRPPQ
Position: 175-189
Source molecule (GenBank): AAI41918.1
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1
Chemical type: Peptide from protein
Sequence: APPAGQPQGPPRPPQ
Position: 175-189
Source molecule (GenBank): AAI41918.1
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1
Chemical type: Peptide from protein
Sequence: APPAGQPQGPPRPPQ
Position: 175-189
Source molecule (GenBank): AAI41918.1
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1 Y11
Chemical type: Peptide, no natural source
Sequence: APPAGQPQGPYRPPQ
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1 Y11
Chemical type: Peptide, no natural source
Sequence: APPAGQPQGPYRPPQ
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1 Y11
Chemical type: Peptide, no natural source
Sequence: APPAGQPQGPYRPPQ
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1 E8
Chemical type: Peptide, no natural source
Sequence: APPAGQPEGPPRPPQ
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1 E8
Chemical type: Peptide, no natural source
Sequence: APPAGQPEGPPRPPQ
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: PRB1-pep1 E8
Chemical type: Peptide, no natural source
Sequence: APPAGQPEGPPRPPQ
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Michelle E Wuerth; Rebecca K Cragerud; P Clint Spiegel. "Structure of the Human Factor VIII C2 Domain in Complex with the 3E6 Inhibitory Antibody." Scientific reports (2015).

Epitope: Epitope of 3E6 Fab on Coagulation Factor VIII
Chemical type: Discontinuous protein residues
Discontinuous residues: E2200, S2201, K2202, A2203, S2205, D2206, H2230, Q2232, G2233, R2234
Source molecule (GenBank): P00451.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.61
Host:  9-12 weeks