Reference: Deepa Bedi; Mohammed Hassan; Alehegne Yirsaw; Biba Vikas; Pran Datta; Temesgen Samuel. "The immunopeptidome of colon cancer cells treated with topoisomerase inhibiting drug reveals differential as well as common endogenous protein sampling and display of MHC I-associated peptides." Molecular & cellular oncology (2025).

Epitope: RRAPAGGSL
Chemical type: Peptide from protein
Sequence: RRAPAGGSL
Position: 4-12
Source molecule (GenBank): Q9H089.2
Assay category: MhcLigandElution
Result: Positive

Epitope: RRAPAGGSL
Chemical type: Peptide from protein
Sequence: RRAPAGGSL
Position: 4-12
Source molecule (GenBank): Q9H089.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: TRVKAVRIL
Chemical type: Peptide from protein
Sequence: TRVKAVRIL
Position: 39-47
Source molecule (GenBank): Q9H3M7.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TRVKAVRIL
Chemical type: Peptide from protein
Sequence: TRVKAVRIL
Position: 39-47
Source molecule (GenBank): Q9H3M7.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: FRVPTANVS
Chemical type: Peptide from protein
Sequence: FRVPTANVS
Position: 233-241
Source molecule (GenBank): P04406.3
Assay category: MhcLigandElution
Result: Positive

Epitope: FRVPTANVS
Chemical type: Peptide from protein
Sequence: FRVPTANVS
Position: 233-241
Source molecule (GenBank): P04406.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: IQRTPKIQVYSRHPA
Chemical type: Peptide from protein
Sequence: IQRTPKIQVYSRHPA
Position: 21-35
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive

Epitope: IQRTPKIQVYSRHPA
Chemical type: Peptide from protein
Sequence: IQRTPKIQVYSRHPA
Position: 21-35
Source molecule (GenBank): P61769.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: VKLAKAGKNQGD
Chemical type: Peptide from protein
Sequence: VKLAKAGKNQGD
Position: 2-13
Source molecule (GenBank): P19338.3
Assay category: MhcLigandElution
Result: Positive

Epitope: VKLAKAGKNQGD
Chemical type: Peptide from protein
Sequence: VKLAKAGKNQGD
Position: 2-13
Source molecule (GenBank): P19338.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: DAVTYTEHAK
Chemical type: Peptide from protein
Sequence: DAVTYTEHAK
Position: 69-78
Source molecule (GenBank): P62805.2
Assay category: MhcLigandElution
Result: Positive

Epitope: DAVTYTEHAK
Chemical type: Peptide from protein
Sequence: DAVTYTEHAK
Position: 69-78
Source molecule (GenBank): P62805.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: TTPSYVAFTDTER
Chemical type: Peptide from protein
Sequence: TTPSYVAFTDTER
Position: 37-49
Source molecule (GenBank): P0DMV8.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TTPSYVAFTDTER
Chemical type: Peptide from protein
Sequence: TTPSYVAFTDTER
Position: 37-49
Source molecule (GenBank): P0DMV8.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: IYVDDGLISLQVK
Chemical type: Peptide from protein
Sequence: IYVDDGLISLQVK
Position: 174-186
Source molecule (GenBank): P14618.4
Assay category: MhcLigandElution
Result: Positive

Epitope: IYVDDGLISLQVK
Chemical type: Peptide from protein
Sequence: IYVDDGLISLQVK
Position: 174-186
Source molecule (GenBank): P14618.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: EIQTAVR
Chemical type: Peptide from protein
Sequence: EIQTAVR
Position: 94-100
Source molecule (GenBank): O60814.3
Assay category: MhcLigandElution
Result: Positive

Epitope: EIQTAVR
Chemical type: Peptide from protein
Sequence: EIQTAVR
Position: 94-100
Source molecule (GenBank): O60814.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: EIIDLVLDR
Chemical type: Peptide from protein
Sequence: EIIDLVLDR
Position: 113-121
Source molecule (GenBank): Q9BQE3.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: EIIDLVLDR
Chemical type: Peptide from protein
Sequence: EIIDLVLDR
Position: 113-121
Source molecule (GenBank): Q9BQE3.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TRNDYVMMY
Chemical type: Peptide from protein
Sequence: TRNDYVMMY
Position: 55-63
Source molecule (GenBank): Q96QU8.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: TRNDYVMMY
Chemical type: Peptide from protein
Sequence: TRNDYVMMY
Position: 55-63
Source molecule (GenBank): Q96QU8.1
Assay category: MhcLigandElution
Result: Positive

Epitope: ESVGKGAVHDVKDVL
Chemical type: Peptide from protein
Sequence: ESVGKGAVHDVKDVL
Position: 92-106
Source molecule (GenBank): P81605.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: ESVGKGAVHDVKDVL
Chemical type: Peptide from protein
Sequence: ESVGKGAVHDVKDVL
Position: 92-106
Source molecule (GenBank): P81605.2
Assay category: MhcLigandElution
Result: Positive

Epitope: ESVGKGAVHDVKD
Chemical type: Peptide from protein
Sequence: ESVGKGAVHDVKD
Position: 92-104
Source molecule (GenBank): P81605.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: ESVGKGAVHDVKD
Chemical type: Peptide from protein
Sequence: ESVGKGAVHDVKD
Position: 92-104
Source molecule (GenBank): P81605.2
Assay category: MhcLigandElution
Result: Positive

Epitope: GVVDSEDIPLNLSR
Chemical type: Peptide from protein
Sequence: GVVDSEDIPLNLSR
Position: 389-402
Source molecule (GenBank): Q12931.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: GVVDSEDIPLNLSR
Chemical type: Peptide from protein
Sequence: GVVDSEDIPLNLSR
Position: 389-402
Source molecule (GenBank): Q12931.3
Assay category: MhcLigandElution
Result: Positive

Epitope: GVVDSEDLPLNISR
Chemical type: Peptide from protein
Sequence: GVVDSEDLPLNISR
Position: 379-392
Source molecule (GenBank): P08238.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: GVVDSEDLPLNISR
Chemical type: Peptide from protein
Sequence: GVVDSEDLPLNISR
Position: 379-392
Source molecule (GenBank): P08238.4
Assay category: MhcLigandElution
Result: Positive

Epitope: EENPIVLEF
Chemical type: Peptide from protein
Sequence: EENPIVLEF
Position: 296-304
Source molecule (GenBank): Q9BWU0.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: EENPIVLEF
Chemical type: Peptide from protein
Sequence: EENPIVLEF
Position: 296-304
Source molecule (GenBank): Q9BWU0.2
Assay category: MhcLigandElution
Result: Positive

Epitope: LLLPGELAK
Chemical type: Peptide from protein
Sequence: LLLPGELAK
Position: 101-109
Source molecule (GenBank): O60814.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: LLLPGELAK
Chemical type: Peptide from protein
Sequence: LLLPGELAK
Position: 101-109
Source molecule (GenBank): O60814.3
Assay category: MhcLigandElution
Result: Positive

Epitope: AVIVLVENFYK
Chemical type: Peptide from protein
Sequence: AVIVLVENFYK
Position: 11-21
Source molecule (GenBank): Q96FQ6.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: AVIVLVENFYK
Chemical type: Peptide from protein
Sequence: AVIVLVENFYK
Position: 11-21
Source molecule (GenBank): Q96FQ6.1
Assay category: MhcLigandElution
Result: Positive

Epitope: KRFGKAYNL
Chemical type: Peptide from protein
Sequence: KRFGKAYNL
Position: 347-355
Source molecule (GenBank): Q86XP3.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: KRFGKAYNL
Chemical type: Peptide from protein
Sequence: KRFGKAYNL
Position: 347-355
Source molecule (GenBank): Q86XP3.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TRMRHVISY
Chemical type: Peptide from protein
Sequence: TRMRHVISY
Position: 9-17
Source molecule (GenBank): O14949.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: TRMRHVISY
Chemical type: Peptide from protein
Sequence: TRMRHVISY
Position: 9-17
Source molecule (GenBank): O14949.4
Assay category: MhcLigandElution
Result: Positive

Epitope: IRKPYIWEY
Chemical type: Peptide from protein
Sequence: IRKPYIWEY
Position: 415-423
Source molecule (GenBank): P07814.5
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: IRKPYIWEY
Chemical type: Peptide from protein
Sequence: IRKPYIWEY
Position: 415-423
Source molecule (GenBank): P07814.5
Assay category: MhcLigandElution
Result: Positive

Epitope: LHTEAQIQEEGTVVELTGR
Chemical type: Peptide from protein
Sequence: LHTEAQIQEEGTVVELTGR
Position: 320-338
Source molecule (GenBank): P01023.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: LHTEAQIQEEGTVVELTGR
Chemical type: Peptide from protein
Sequence: LHTEAQIQEEGTVVELTGR
Position: 320-338
Source molecule (GenBank): P01023.3
Assay category: MhcLigandElution
Result: Positive

Epitope: GAVHDVKDVLDS
Chemical type: Peptide from protein
Sequence: GAVHDVKDVLDS
Position: 97-108
Source molecule (GenBank): P81605.2
Assay category: MhcLigandElution
Result: Positive

Epitope: GAVHDVKDVLDS
Chemical type: Peptide from protein
Sequence: GAVHDVKDVLDS
Position: 97-108
Source molecule (GenBank): P81605.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 211 185 198 1

Epitope: SQLERNIET
Chemical type: Peptide from protein
Sequence: SQLERNIET
Position: 6-14
Source molecule (GenBank): P06702.1
Assay category: MhcLigandElution
Result: Positive