Reference: S Schweitzer; A M Schneiders; B Langhans; W Kraas; G Jung; O Vidalin; G Inchauspe; T Sauerbruch; U Spengler. "Flow cytometric analysis of peptide binding to major histocampatibility complex class I for hepatitis C virus core T-cell epitopes." Cytometry. (2000).

Epitope: Peptide 1
Chemical type: Peptide from protein
Sequence: MSTNPKPQRK
Position: 1-10
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 2
Chemical type: Peptide from protein
Sequence: TNPKPQRKTK
Position: 3-12
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 5
Chemical type: Peptide from protein
Sequence: RKTKRNTNRR
Position: 9-18
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 6
Chemical type: Peptide from protein
Sequence: TKRNTNRRPL
Position: 11-20
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 7
Chemical type: Peptide from protein
Sequence: RNTNRRPLDV
Position: 13-22
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 8
Chemical type: Peptide from protein
Sequence: TNRRPLDVKF
Position: 15-24
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 9
Chemical type: Peptide from protein
Sequence: RRPLDVKFPG
Position: 17-26
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 11
Chemical type: Peptide from protein
Sequence: DVKFPGGGQI
Position: 21-30
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 12
Chemical type: Peptide from protein
Sequence: KFPGGGQIVG
Position: 23-32
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 13
Chemical type: Peptide from protein
Sequence: PGGGQIVGGV
Position: 25-34
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 14
Chemical type: Peptide from protein
Sequence: GGQIVGGVYL
Position: 27-36
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 14
Chemical type: Peptide from protein
Sequence: GGQIVGGVYL
Position: 27-36
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 15
Chemical type: Peptide from protein
Sequence: QIVGGVYLLP
Position: 29-38
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 16
Chemical type: Peptide from protein
Sequence: VGGVYLLPRR
Position: 31-40
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 18
Chemical type: Peptide from protein
Sequence: YLLPRRGPRL
Position: 35-44
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 19
Chemical type: Peptide from protein
Sequence: LPRRGPRLGV
Position: 37-46
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 20
Chemical type: Peptide from protein
Sequence: RRGPRLGVRA
Position: 39-48
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 22
Chemical type: Peptide from protein
Sequence: RLGVRATRKT
Position: 43-52
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 23
Chemical type: Peptide from protein
Sequence: GVRATRKTSE
Position: 45-54
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 24
Chemical type: Peptide from protein
Sequence: RATRKTSERS
Position: 47-56
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 25
Chemical type: Peptide from protein
Sequence: TRKTSERSQP
Position: 49-58
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 26
Chemical type: Peptide from protein
Sequence: KTSERSQPRG
Position: 51-60
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 28
Chemical type: Peptide from protein
Sequence: RSQPRGRRQP
Position: 55-64
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 30
Chemical type: Peptide from protein
Sequence: RGRRQPIPKA
Position: 59-68
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 31
Chemical type: Peptide from protein
Sequence: KARRPEGRTW
Position: 67-76
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 32
Chemical type: Peptide from protein
Sequence: RRPEGRTWAQ
Position: 69-78
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 36
Chemical type: Peptide from protein
Sequence: GRTWAQPGYP
Position: 73-82
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 36
Chemical type: Peptide from protein
Sequence: GRTWAQPGYP
Position: 73-82
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 37
Chemical type: Peptide from protein
Sequence: TWAQPGYPWP
Position: 75-84
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 39
Chemical type: Peptide from protein
Sequence: AQPGYPWPLY
Position: 77-86
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 39
Chemical type: Peptide from protein
Sequence: AQPGYPWPLY
Position: 77-86
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 40
Chemical type: Peptide from protein
Sequence: PGYPWPLYGN
Position: 79-88
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 41
Chemical type: Peptide from protein
Sequence: YPWPLYGNEG
Position: 81-90
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 42
Chemical type: Peptide from protein
Sequence: WPLYGNEGCG
Position: 83-92
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 43
Chemical type: Peptide from protein
Sequence: LYGNEGCGWA
Position: 85-94
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 44
Chemical type: Peptide from protein
Sequence: EGCGWAGWLL
Position: 89-98
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 44
Chemical type: Peptide from protein
Sequence: EGCGWAGWLL
Position: 89-98
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 45
Chemical type: Peptide from protein
Sequence: CGWAGWLLSP
Position: 91-100
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 47
Chemical type: Peptide from protein
Sequence: WAGWLLSPRG
Position: 93-102
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 49
Chemical type: Peptide from protein
Sequence: PTDPRRRSRN
Position: 109-118
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 54
Chemical type: Peptide from protein
Sequence: DPRRRSRNLG
Position: 111-120
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 57
Chemical type: Peptide from protein
Sequence: RRRSRNLGKV
Position: 113-122
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 58
Chemical type: Peptide from protein
Sequence: RSRNLGKVID
Position: 115-124
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 59
Chemical type: Peptide from protein
Sequence: RNLGKVIDTL
Position: 117-126
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 59
Chemical type: Peptide from protein
Sequence: RNLGKVIDTL
Position: 117-126
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 60
Chemical type: Peptide from protein
Sequence: LGKVIDTLTC
Position: 119-128
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 60
Chemical type: Peptide from protein
Sequence: LGKVIDTLTC
Position: 119-128
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 62
Chemical type: Peptide from protein
Sequence: IDTLTCGLAD
Position: 123-132
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 63
Chemical type: Peptide from protein
Sequence: TCGLADLMGY
Position: 127-136
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 63
Chemical type: Peptide from protein
Sequence: TCGLADLMGY
Position: 127-136
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 64
Chemical type: Peptide from protein
Sequence: GLADLMGYIP
Position: 129-138
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 64
Chemical type: Peptide from protein
Sequence: GLADLMGYIP
Position: 129-138
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 66
Chemical type: Peptide from protein
Sequence: ADLMGYIPLV
Position: 131-140
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 67
Chemical type: Peptide from protein
Sequence: LMGYIPLVGA
Position: 133-142
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 68
Chemical type: Peptide from protein
Sequence: GYIPLVGAPL
Position: 135-144
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 69
Chemical type: Peptide from protein
Sequence: LVGAPLGGAA
Position: 139-148
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 70
Chemical type: Peptide from protein
Sequence: GAPLGGAARA
Position: 141-150
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 72
Chemical type: Peptide from protein
Sequence: PLGGAARALA
Position: 143-152
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 73
Chemical type: Peptide from protein
Sequence: GGAARALAHG
Position: 145-154
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 74
Chemical type: Peptide from protein
Sequence: AARALAHGVR
Position: 147-156
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 75
Chemical type: Peptide from protein
Sequence: RALAHGVRVL
Position: 149-158
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 75
Chemical type: Peptide from protein
Sequence: RALAHGVRVL
Position: 149-158
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 76
Chemical type: Peptide from protein
Sequence: LAHGVRVLED
Position: 151-160
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 77
Chemical type: Peptide from protein
Sequence: HGVRVLEDGV
Position: 153-162
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 78
Chemical type: Peptide from protein
Sequence: VRVLEDGVNY
Position: 155-164
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 79
Chemical type: Peptide from protein
Sequence: EDGVNYATGN
Position: 159-168
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 80
Chemical type: Peptide from protein
Sequence: GVNYATGNLP
Position: 161-170
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 82
Chemical type: Peptide from protein
Sequence: NYATGNLPGC
Position: 163-172
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 83
Chemical type: Peptide from protein
Sequence: ATGNLPGCSF
Position: 165-174
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 84
Chemical type: Peptide from protein
Sequence: GNLPGCSFSI
Position: 167-176
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 85
Chemical type: Peptide from protein
Sequence: LPGCSFSIFL
Position: 169-178
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 85
Chemical type: Peptide from protein
Sequence: LPGCSFSIFL
Position: 169-178
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 86
Chemical type: Peptide from protein
Sequence: GCSFSIFLLA
Position: 171-180
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 87
Chemical type: Peptide from protein
Sequence: SFSIFLLALL
Position: 173-182
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 88
Chemical type: Peptide from protein
Sequence: SIFLLALLSC
Position: 175-184
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 89
Chemical type: Peptide from protein
Sequence: FLLALLSCLT
Position: 177-186
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 90
Chemical type: Peptide from protein
Sequence: LALLSCLTVP
Position: 179-188
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 44 (nanomer)
Chemical type: Peptide from protein
Sequence: GCGWAGWLL
Position: 90-98
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive