Reference: David D Eckels; Tonghua Bian; Joan C Gill; Grete Sønderstrup. "Epitopes of the NS3 protein of hepatitis C virus: recognition in HLA-DR4 transgenic mice." Immunology and cell biology (2002).

Epitope: NS3 218-235
Chemical type: Peptide from protein
Sequence: YAAQGYKVLVLNPSVAAT
Position: 218-235
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 218-235
Chemical type: Peptide from protein
Sequence: YAAQGYKVLVLNPSVAAT
Position: 218-235
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 225-242
Chemical type: Peptide from protein
Sequence: VLVLNPSVAATLGFGAYM
Position: 225-242
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 225-242
Chemical type: Peptide from protein
Sequence: VLVLNPSVAATLGFGAYM
Position: 225-242
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 148-165
Chemical type: Peptide from protein
Sequence: GHAVGLFRAAVCTRGVAK
Position: 148-165
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 148-165
Chemical type: Peptide from protein
Sequence: GHAVGLFRAAVCTRGVAK
Position: 148-165
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 176-193
Chemical type: Peptide from protein
Sequence: ETTMRSPVFTDNSSPPAV
Position: 176-193
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 176-193
Chemical type: Peptide from protein
Sequence: ETTMRSPVFTDNSSPPAV
Position: 176-193
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 183-200
Chemical type: Peptide from protein
Sequence: VFTDNSSPPAVPQSFQVA
Position: 183-200
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 183-200
Chemical type: Peptide from protein
Sequence: VFTDNSSPPAVPQSFQVA
Position: 183-200
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 232-249
Chemical type: Peptide from protein
Sequence: VAATLGFGAYMSKAHGVD
Position: 232-249
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 232-249
Chemical type: Peptide from protein
Sequence: VAATLGFGAYMSKAHGVD
Position: 232-249
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 316-333
Chemical type: Peptide from protein
Sequence: RLVVLATATPPGSVTVSH
Position: 316-333
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 316-333
Chemical type: Peptide from protein
Sequence: RLVVLATATPPGSVTVSH
Position: 316-333
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 553-571
Chemical type: Peptide from protein
Sequence: RTGVRTITTGSPITYSTYG
Position: 253-271
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 553-571
Chemical type: Peptide from protein
Sequence: RTGVRTITTGSPITYSTYG
Position: 253-271
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 561-578
Chemical type: Peptide from protein
Sequence: VAYQATVCARAQAPPPSW
Position: 561-578
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 561-578
Chemical type: Peptide from protein
Sequence: VAYQATVCARAQAPPPSW
Position: 561-578
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: In Vivo

Epitope: NS3 225-235
Chemical type: Peptide from protein
Sequence: VLVLNPSVAAT
Position: 225-235
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 225-235
Chemical type: Peptide from protein
Sequence: VLVLNPSVAAT
Position: 225-235
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 183-193
Chemical type: Peptide from protein
Sequence: VFTDNSSPPAV
Position: 183-193
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 183-193
Chemical type: Peptide from protein
Sequence: VFTDNSSPPAV
Position: 183-193
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 561-571
Chemical type: Peptide from protein
Sequence: VAYQATVCARA
Position: 561-571
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone

Epitope: NS3 561-571
Chemical type: Peptide from protein
Sequence: VAYQATVCARA
Position: 561-571
Source molecule (GenBank): NP_803144.1
Assay category: TCell
Result: Positive
Host:  15 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone