LiteFold/IEDB huggingface dataset:
Reference: Xiao Cong; Lin Zhang; Haibo Zhu; Miaoli Wu; Yujun Zhu; Yuexiao Lian; Bihong Huang; Youfang Gu; Feng Cong. "Preparation of a new monoclonal antibody against nucleocapsid protein of swine acute diarrhea syndrome coronavirus and identification of its linear antigenic epitope." International journal of biological macromolecules (2023).

Epitope: SADS-CoV N 11-19
Chemical type: Peptide from protein
Sequence: EQAESRGRK
Position: 11-19
Source molecule (GenBank): QDE12101.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: SADS-CoV N 11-19
Chemical type: Peptide from protein
Sequence: EQAESRGRK
Position: 11-19
Source molecule (GenBank): QDE12101.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: SADS-CoV N 11-19
Chemical type: Peptide from protein
Sequence: EQAESRGRK
Position: 11-19
Source molecule (GenBank): QDE12101.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Maria Goulielmaki; Savvas Stokidis; Theodoros Anagnostou; Ioannis F Voutsas; Angelos D Gritzapis; Constantin N Baxevanis; Sotirios P Fortis. "Frequencies of an Immunogenic HER-2/ Epitope of CD8+ T Lymphocytes Predict Favorable Clinical Outcomes in Prostate Cancer." International journal of molecular sciences (2023).

Epitope: Her-2 neu 780-788
Chemical type: Peptide from protein
Sequence: PYVSRLLGI
Position: 780-788
Source molecule (GenBank): AAA75493.1
Assay category: TCell
Result: Positive-High
Host: M 49-88 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Aurélien Haustrate; George Shapovalov; Corentin Spriet; Clément Cordier; Artem Kondratskyi; Lucile Noyer; François Foulquier; Natalia Prevarskaya; V'yacheslav Lehen'kyi. "TRPV6 Calcium Channel Targeting by Antibodies Raised against Extracellular Epitopes Induces Prostate Cancer Cell Apoptosis." Cancers (2023).

Epitope: Peptide 79a
Chemical type: Peptide from protein
Sequence: QEAYMTPKDDIRLVG
Position: 414-428
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 79a
Chemical type: Peptide from protein
Sequence: QEAYMTPKDDIRLVG
Position: 414-428
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 79a
Chemical type: Peptide from protein
Sequence: QEAYMTPKDDIRLVG
Position: 414-428
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 79a
Chemical type: Peptide from protein
Sequence: QEAYMTPKDDIRLVG
Position: 414-428
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 82
Chemical type: Peptide from protein
Sequence: TEDPEELGHFYDYPMA
Position: 554-569
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 82
Chemical type: Peptide from protein
Sequence: TEDPEELGHFYDYPMA
Position: 554-569
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 82
Chemical type: Peptide from protein
Sequence: TEDPEELGHFYDYPMA
Position: 554-569
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 82
Chemical type: Peptide from protein
Sequence: TEDPEELGHFYDYPMA
Position: 554-569
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Positive

Epitope: Peptide 80
Chemical type: Peptide from protein
Sequence: QRRESWAQSRDEQNL
Position: 64-78
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Negative

Epitope: Peptide 81
Chemical type: Peptide from protein
Sequence: HTRGSEDLDKDSVEK
Position: 692-706
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Negative

Epitope: Peptide 79b
Chemical type: Peptide from protein
Sequence: QEAYMTPKDDIR
Position: 414-425
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Negative

Epitope: Peptide 79c
Chemical type: Peptide from protein
Sequence: QQKLLQEAYMTPKDD
Position: 409-423
Source molecule (GenBank): Q9H1D0.3
Assay category: BCell
Result: Negative
Reference: Ashish Kumar; Tiana C Rohe; Elizabeth J Elrod; Abdul G Khan; Altaira D Dearborn; Ryan Kissinger; Arash Grakoui; Joseph Marcotrigiano. "Regions of hepatitis C virus E2 required for membrane association." Nature communications (2023).

Epitope: Epitope of 2A12 Fab on HCV E2 core
Chemical type: Discontinuous protein residues
Discontinuous residues: K632, R634, Y636, E641, R643, L644, T645
Source molecule (GenBank): P26660.3
Assay category: BCell
Result: Positive
Quantitative measurement: 2.45
Reference: Peter Korošec; Ana Koren; Jerneja Debeljak; Abida Zahirović; Maja Skerbinjek-Kavalar; Vojko Berce; Luka Dejanović; Jernej Luzar; Borut Štrukelj; Mojca Lunder. "Ara h 2-specific IgE epitope-like peptides inhibit the binding of IgE to Ara h 2 and suppress lgE-dependent effector cell activation." Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology (2023).

Epitope: Peptide 1
Chemical type: Peptide, no natural source
Sequence: DHPRFNDSYNSP
Assay category: BCell
Result: Positive

Epitope: Peptide 2
Chemical type: Peptide, no natural source
Sequence: DHPRFNRDNDVA
Assay category: BCell
Result: Positive

Epitope: Peptide 2
Chemical type: Peptide, no natural source
Sequence: DHPRFNRDNDVA
Assay category: BCell
Result: Positive

Epitope: Peptide 3
Chemical type: Peptide, no natural source
Sequence: DHPRFNYVSQPW
Assay category: BCell
Result: Positive

Epitope: Peptide 4
Chemical type: Peptide, no natural source
Sequence: DHPRFAP
Assay category: BCell
Result: Positive

Epitope: Peptide 5
Chemical type: Peptide, no natural source
Sequence: DHPRYGP
Assay category: BCell
Result: Positive

Epitope: Peptide 5
Chemical type: Peptide, no natural source
Sequence: DHPRYGP
Assay category: BCell
Result: Positive

Epitope: Peptide 6
Chemical type: Peptide, no natural source
Sequence: DHPRFST
Assay category: BCell
Result: Positive

Epitope: Peptide 6
Chemical type: Peptide, no natural source
Sequence: DHPRFST
Assay category: BCell
Result: Positive

Epitope: Peptide 7
Chemical type: Peptide, no natural source
Sequence: DHPRFAE
Assay category: BCell
Result: Positive

Epitope: Peptide 8
Chemical type: Peptide, no natural source
Sequence: DHPRFPL
Assay category: BCell
Result: Positive

Epitope: Peptide 9
Chemical type: Peptide, no natural source
Sequence: DHPRFSF
Assay category: BCell
Result: Positive

Epitope: Peptide 10
Chemical type: Peptide, no natural source
Sequence: NHPRFNL
Assay category: BCell
Result: Positive
Reference: Nienke Oskam; Pleuni Ooijevaar-De Heer; Dorien Kos; Jorn Jeremiasse; Laurette van Boheemen; Gwenny M Verstappen; Frans G M Kroese; Dirkjan van Schaardenburg; Gertjan Wolbink; Theo Rispens. "Rheumatoid factor autoantibody repertoire profiling reveals distinct binding epitopes in health and autoimmunity." Annals of the rheumatic diseases (2023).

Epitope: Epitope of Rheumatoid Arthritis serum IgM-RF/IgA-RF
Chemical type: Discontinuous protein residues
Discontinuous residues: V304, H315, H317, Q320
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Rheumatoid Arthritis serum IgM-RF/IgA-RF
Chemical type: Discontinuous protein residues
Discontinuous residues: V304, H315, H317, Q320
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Sjogren's Disease Serum IgM-RF
Chemical type: Discontinuous protein residues
Discontinuous residues: I135, R137, L191, E227, H315, H317
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb RF-34
Chemical type: Discontinuous protein residues
Discontinuous residues: I135, R137, L191, Q224, P225, E227, Y255, H315, H317, T319, Q320
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb RF-34
Chemical type: Discontinuous protein residues
Discontinuous residues: I135, R137, L191, Q224, P225, E227, Y255, H315, H317, T319, Q320
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb RF-35
Chemical type: Discontinuous protein residues
Discontinuous residues: R237, Q300, V304, Q320, P327
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Sjogren's Disease Serum IgA-RF
Chemical type: Discontinuous protein residues
Discontinuous residues: I135, R137, L191, Q224, P225, Y255, V304, H317, Q320
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive

Epitope: Epitope of healthy donors' IgM-RF
Chemical type: Discontinuous protein residues
Discontinuous residues: R237, Q300, H315, H317, P327
Source molecule (GenBank): AAC82527.1
Assay category: BCell
Result: Positive
Reference: Yue Pan; Indu R Chandrashekaran; Luke Tennant; Jamie Rossjohn; Dene R Littler. "Inside-out: Antibody-binding reveals potential folding hinge-points within the SARS-CoV-2 replication co-factor nsp9." PloS one (2023).

Epitope: Epitope of Nb VHH2nsp23 on SARS-CoV2 Nsp9
Chemical type: Discontinuous protein residues
Discontinuous residues: K4192, W4193, K4198, T4202, G4203, T4204, I4205, Y4206, T4207, E4208, K4232, G4233, N4235, L4237, N4238
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.45

Epitope: Epitope of Nb VHH2nsp23 on SARS-CoV2 Nsp9
Chemical type: Discontinuous protein residues
Discontinuous residues: K4192, W4193, K4198, T4202, G4203, T4204, I4205, Y4206, T4207, E4208, K4232, G4233, N4235, L4237, N4238
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Reference: Xiaoyu Chu; Xinyu Ding; Yixuan Yang; Yuchi Lu; Tinghan Li; Yan Gao; Le Zheng; Hang Xiao; Tingting Yang; Hao Cheng; Haibin Huang; Yang Liu; Yang Lou; Chao Wu; Yuxin Chen; Haitao Yang; Xiaoyun Ji; Hangtian Guo. "Mechanism of an RBM-targeted rabbit monoclonal antibody 9H1 neutralizing SARS-CoV-2." Biochemical and biophysical research communications (2023).

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks

Epitope: Epitope of Fab 9H1 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, E406, R408, V445, Y449, G496, Q498, P499, T500, N501, G502, V503, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  4-6 weeks
Reference: Jing-Ying Sun; Chun-Yan Guo; Guo-Rong Wang; Li-Ting Yan; Qing Feng; Yan Li; Xue-Ping Huo; Xin Xie; Jun Hu; Li-Jun Sun. "Identification of Heterophilic Epitopes of H1N1 Influenza Virus Hemagglutinin." Current microbiology (2023).

Epitope: HA (306-319aa)
Chemical type: Peptide from protein
Sequence: SLPFQNIHPITIGK
Position: 306-319
Source molecule (GenBank): C3W5S1
Assay category: BCell
Result: Positive

Epitope: HA (306-319aa)
Chemical type: Peptide from protein
Sequence: SLPFQNIHPITIGK
Position: 306-319
Source molecule (GenBank): C3W5S1
Assay category: BCell
Result: Positive

Epitope: HA (306-319aa)
Chemical type: Peptide from protein
Sequence: SLPFQNIHPITIGK
Position: 306-319
Source molecule (GenBank): C3W5S1
Assay category: BCell
Result: Positive
Reference: Takafumi Ito; Tohru Mekata; Niels Jørgen Olesen; Niels Lorenzen. "Epitope mapping of the monoclonal antibody IP5B11 used for detection of viral haemorrhagic septicaemia virus facilitated by genome sequencing of carpione novirhabdovirus." Veterinary research (2023).

Epitope: N219-A233
Chemical type: Peptide from protein
Sequence: NGTGMTMIGLFTQAA
Position: 219-233
Source molecule (GenBank): ACA34520.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: N219-A233
Chemical type: Peptide from protein
Sequence: NGTGMTMIGLFTQAA
Position: 219-233
Source molecule (GenBank): ACA34520.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: N219-A233
Chemical type: Peptide from protein
Sequence: NGTGMTMIGLFTQAA
Position: 219-233
Source molecule (GenBank): ACA34520.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Tomoki Naoe; Akiko Saito; Nahoko Hosono; Senji Kasahara; Hideharu Muto; Kaoru Hatano; Mizuki Ogura; Taro Masunari; Masatsugu Tanaka; Kensuke Usuki; Yuichi Ishikawa; Koji Ando; Yukio Kondo; Yusuke Takagi; Satoru Takada; Maho Ishikawa; Ilseung Choi; Akihiro Sano; Hirokazu Nagai. "Immunoreactivity to WT1 peptide vaccine is associated with prognosis in elderly patients with acute myeloid leukemia: follow-up study of randomized phase II trial of OCV-501, an HLA class II-binding WT1 polypeptide." Cancer immunology, immunotherapy : CII (2023).

Epitope: OCV-501
Chemical type: Peptide from protein
Sequence: KRYFKLSHLQMHSRKH
Position: 405-420
Source molecule (GenBank): H0Y7K5
Assay category: BCell
Result: Positive

Epitope: OCV-501
Chemical type: Peptide from protein
Sequence: KRYFKLSHLQMHSRKH
Position: 405-420
Source molecule (GenBank): H0Y7K5
Assay category: BCell
Result: Positive

Epitope: OCV-501
Chemical type: Peptide from protein
Sequence: KRYFKLSHLQMHSRKH
Position: 405-420
Source molecule (GenBank): H0Y7K5
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: OCV-501
Chemical type: Peptide from protein
Sequence: KRYFKLSHLQMHSRKH
Position: 405-420
Source molecule (GenBank): H0Y7K5
Assay category: TCell
Result: Negative
Reference: Rachel Farquhar; Ildiko Van Rhijn; D Branch Moody; Jamie Rossjohn; Adam Shahine. "αβ T-cell receptor recognition of self-phosphatidylinositol presented by CD1b." The Journal of biological chemistry (2023).

Epitope: Phosphatidylinositol C34:1
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Quantitative measurement: 2.4

Epitope: Phosphatidylinositol C34:1
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.9

Epitope: Phosphatidylinositol C34:1
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.4
Reference: Amal El Daibani; Joseph M Paggi; Kuglae Kim; Yianni D Laloudakis; Petr Popov; Sarah M Bernhard; Brian E Krumm; Reid H J Olsen; Jeffrey Diberto; F Ivy Carroll; Vsevolod Katritch; Bernhard Wünsch; Ron O Dror; Tao Che. "Molecular mechanism of biased signaling at the kappa opioid receptor." Nature communications (2023).

Epitope: Epitope of nanobody Nb39 on kappa opiod receptor
Chemical type: Discontinuous protein residues
Discontinuous residues: T92, R156, A159, V160, P163, V164, L167, R170, T171, R252, L253, V256, S262, E264, K265, N268
Source molecule (GenBank): P41145.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.3
Reference: Ye Che; Alexey V Gribenko; Xi Song; Luke D Handke; Kari S Efferen; Kristin Tompkins; Srinivas Kodali; Lorna Nunez; A Krishna Prasad; Lynn M Phelan; Mark Ammirati; Xiaodi Yu; Joshua A Lees; Wei Chen; Lyndsey Martinez; Vidia Roopchand; Seungil Han; Xiayang Qiu; John P DeVincenzo; Kathrin U Jansen; Philip R Dormitzer; Kena A Swanson. "Rational design of a highly immunogenic prefusion-stabilized F glycoprotein antigen for a respiratory syncytial virus vaccine." Science translational medicine (2023).

Epitope: Epitope of AM14 Fab on RSV
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N428, R429, I432, K445, E463; K: L160, E161, S182, N183
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive

Epitope: Epitope of AM14 Fab on RSV
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N428, R429, I432, K445, E463; K: L160, E161, S182, N183
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive

Epitope: Epitope of D25 mAb on RSV F
Chemical type: Discontinuous protein residues
Discontinuous residues: N63, K65, E66, K68, K196, N197, Y198, I199, D200, K201, Q202, L203, L204, P205, I206, V207, N208, K209, Q210
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive
Reference: Naba K Das; Nele M Hollmann; Jeff Vogt; Spiridon E Sevdalis; Hasan A Banna; Manju Ojha; Deepak Koirala. "Crystal structure of a highly conserved enteroviral 5' cloverleaf RNA replication element." Nature communications (2023).

Epitope: Epitope of BL3-6 Fab
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 1.91

Epitope: Epitope of BL3-6 Fab
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Reference: W Huisman; M C J Roex; L Hageman; E A S Koster; S A J Veld; C Hoogstraten; P van Balen; H M van Egmond; C A M van Bergen; H Einsele; L Germeroth; D Amsen; J H F Falkenburg; I Jedema. "Tracking the progeny of adoptively transferred virus-specific T cells in patients posttransplant using TCR sequencing." Blood advances (2023).

Epitope: CMV pp65 NLV
Chemical type: Peptide from protein
Sequence: NLVPMVATV
Position: 495-503
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65 QYD
Chemical type: Peptide from protein
Sequence: QYDPVAALF
Position: 341-349
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV pp65 TPR
Chemical type: Peptide from protein
Sequence: TPRVTGGGAM
Position: 417-426
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CMV IE1 QIK
Chemical type: Peptide from protein
Sequence: QIKVRVDMV
Position: 88-96
Source molecule (GenBank): YP_081562
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBV EBNA3A RPP
Chemical type: Peptide from protein
Sequence: RPPIFIRRL
Position: 379-387
Source molecule (GenBank): Q3KST2.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBV BMLF1 GLC
Chemical type: Peptide from protein
Sequence: GLCTLVAML
Position: 259-267
Source molecule (GenBank): CAD53409.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBV BZLF1 RAK
Chemical type: Peptide from protein
Sequence: RAKFKQLL
Position: 190-197
Source molecule (GenBank): AAA66529.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AdV HEXON TDL
Chemical type: Peptide from protein
Sequence: TDLGQNLLY
Position: 902-910
Source molecule (GenBank): P03277.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AdV HEXON TYF
Chemical type: Peptide from protein
Sequence: TYFSLNNKF
Position: 37-45
Source molecule (GenBank): P03277.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AdV HEXON KPY
Chemical type: Peptide from protein
Sequence: KPYSGTAYNAL
Position: 114-124
Source molecule (GenBank): P03277.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AdV E1A LLD
Chemical type: Peptide from protein
Sequence: LLDQLIEEV
Position: 19-27
Source molecule (GenBank): P03254.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Amanda Berube; Grzegorz B Gmyrek; Derek J Royer; Daniel J J Carr. "Tripartite-Motif 21 (TRIM21) Deficiency Results in a Modest Loss of Herpes Simplex Virus (HSV)-1 Surveillance in the Trigeminal Ganglia Following Cornea Infection." Viruses (2022).

Epitope: gD
Chemical type: Peptide from protein
Sequence: IPPNWHIPSIQDA
Position: 315-327
Source molecule (GenBank): AAA19629.1
Assay category: TCell
Result: Positive
Host:  5-6 weeks
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Direct Ex Vivo

Epitope: gD
Chemical type: Peptide from protein
Sequence: IPPNWHIPSIQDA
Position: 315-327
Source molecule (GenBank): AAA19629.1
Assay category: TCell
Result: Positive
Host:  5-6 weeks
Cell type: T cell CD4+
Tissue: central nervous system (CNS)
Culture conditions: Direct Ex Vivo

Epitope: ICP6
Chemical type: Peptide from protein
Sequence: QTFDFGRL
Position: 822-829
Source molecule (GenBank): NP_044641.1
Assay category: TCell
Result: Positive
Host:  5-6 weeks
Cell type: T cell CD8+
Tissue: central nervous system (CNS)
Culture conditions: Direct Ex Vivo

Epitope: ICP8
Chemical type: Peptide from protein
Sequence: INNTFLHL
Position: 171-178
Source molecule (GenBank): NP_044631.1
Assay category: TCell
Result: Positive
Host:  5-6 weeks
Cell type: T cell CD8+
Tissue: central nervous system (CNS)
Culture conditions: Direct Ex Vivo

Epitope: gB
Chemical type: Peptide from protein
Sequence: SSIEFARL
Position: 499-506
Source molecule (GenBank): AAF04615.1
Assay category: TCell
Result: Positive
Host:  5-6 weeks
Cell type: T cell CD8+
Tissue: central nervous system (CNS)
Culture conditions: Direct Ex Vivo

Epitope: gB
Chemical type: Peptide from protein
Sequence: SSIEFARL
Position: 499-506
Source molecule (GenBank): AAF04615.1
Assay category: TCell
Result: Positive
Host:  5-6 weeks
Cell type: T cell CD8+
Tissue: central nervous system (CNS)
Culture conditions: Direct Ex Vivo