LiteFold/IEDB huggingface dataset:
Reference: Tongcui Ma; Heeju Ryu; Matthew McGregor; Benjamin Babcock; Jason Neidleman; Guorui Xie; Ashley F George; Julie Frouard; Victoria Murray; Gurjot Gill; Eliver Ghosn; Evan W Newell; Sulggi A Lee; Nadia R Roan. "Protracted yet Coordinated Differentiation of Long-Lived SARS-CoV-2-Specific CD8<sup>+</sup> T Cells during Convalescence." Journal of immunology (Baltimore, Md. : 1950) (2021).

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Negative
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Nuc 322-331
Chemical type: Peptide from protein
Sequence: MEVTPSGTWL
Position: 322-331
Source molecule (GenBank): QHD43423.2
Assay category: TCell
Result: Positive
Host: F 42 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Xingui Tian; Chuncong Mo; Liling Zhou; Yujie Yang; Zhichao Zhou; Aiping You; Ye Fan; Wenkuan Liu; Xiao Li; Rong Zhou. "Epitope mapping of severe acute respiratory syndrome-related coronavirus nucleocapsid protein with a rabbit monoclonal antibody." Virus research (2021).

Epitope: SARS-COV2-N4-8
Chemical type: Peptide from protein
Sequence: TLLPAADLDDFSKQL
Position: 393-407
Source molecule (GenBank): QTQ43869.1
Assay category: BCell
Result: Positive

Epitope: SARS-COV2-N4-8
Chemical type: Peptide from protein
Sequence: TLLPAADLDDFSKQL
Position: 393-407
Source molecule (GenBank): QTQ43869.1
Assay category: BCell
Result: Positive-Low

Epitope: SARS-COV2-N4-8
Chemical type: Peptide from protein
Sequence: TLLPAADLDDFSKQL
Position: 393-407
Source molecule (GenBank): QTQ43869.1
Assay category: BCell
Result: Positive

Epitope: SARS-COV2-N4-8
Chemical type: Peptide from protein
Sequence: TLLPAADLDDFSKQL
Position: 393-407
Source molecule (GenBank): QTQ43869.1
Assay category: BCell
Result: Positive

Epitope: SARS-COV2-N4-8
Chemical type: Peptide from protein
Sequence: TLLPAADLDDFSKQL
Position: 393-407
Source molecule (GenBank): QTQ43869.1
Assay category: BCell
Result: Positive
Reference: Marieme Dembele; Shao Tao; Amir H Massoud; S M Shahjahan Miah; Sandra Lelias; Anne S De Groot; Bruce D Mazer. "Tregitopes Improve Asthma by Promoting Highly Suppressive and Antigen-Specific Tregs." Frontiers in immunology (2021).

Epitope: mTregitope 167
Chemical type: Peptide from protein
Sequence: PAVLQSDLYTLSSSVTVPSSTWPSQ
Position: 170-194
Source molecule (GenBank): 5LDN_H
Assay category: TCell
Result: Positive
Reference: Ana Castro; Juan Manuel Carreño; James Duehr; Florian Krammer; Ravi S Kane. "Refocusing the Immune Response to Selected Epitopes on a Zika Virus Protein Antigen by Nanopatterning." Advanced healthcare materials (2021).

Epitope: ZV-2-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: K591, T605, K606, I607, P608, A609, E610, T611, L612, T617, E619, N652, V654, I655, T656, E657, S662, K663, M664, M665, E667
Source molecule (GenBank): A0A024B7W1.1
Assay category: BCell
Result: Positive

Epitope: ZV-48-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: L597, K630, P632, A633, Q634, V637, D638, Q640, T641, L642, T643, P644, V645, L648, D674, Y676, V681
Source molecule (GenBank): A0A024B7W1.1
Assay category: BCell
Result: Positive

Epitope: ZV-67-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: T599, A600, A601, F602, T603, F604, Q621, Y622, A623, G624, T625, D626, G627, S658, E660, N661, E683, K684, K685, I686, T687
Source molecule (GenBank): A0A024B7W1.1
Assay category: BCell
Result: Positive
Reference: Tom Z Yuan; Ana G Lujan Hernandez; Erica Keane; Qiang Liu; Fumiko Axelrod; Shweta Kailasan; Madeleine Noonan-Shueh; Mohammad Javad Aman; Aaron K Sato; Yasmina N Abdiche. "Rapid exploration of the epitope coverage produced by an Ebola survivor to guide the discovery of therapeutic antibody cocktails." Antibody therapeutics (2020).

Epitope: Epitope of ADI-16061
Chemical type: Discontinuous protein residues
Discontinuous residues: H628, D632
Source molecule (GenBank): AJA04402.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb ADI-15878
Chemical type: Region on multi-chain protein
Discontinuous residues: A: P34, V45, D47; D: I527, G528, L529, A530, F535, G536, P537, R559, Q560, L561, N563, E564, Q567
Source molecule (GenBank): AKG65268.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb100
Chemical type: Discontinuous protein residues
Discontinuous residues: E523, G524, A526, I527
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb c2G4-N
Chemical type: Discontinuous protein residues
Discontinuous residues: V505, N506, A507, Q508, K510, C511, N512, P513, N550, Q551, D552, G553, C556, G557
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb KZ52
Chemical type: Region on multi-chain protein
Discontinuous residues: I: L43; J: V505, N506, A507, Q508, P509, K510, C511, N512, P513, N514, H549, N550, Q551, D552, G553, L554, I555, C556
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb ADI-15946
Chemical type: Discontinuous protein residues
Discontinuous residues: K510
Source molecule (GenBank): AJA04402.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb cA45
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N514, L515, H516, Y517, Q521, T544, E545, G546, L547, M548, H549, N550, Q551, D552, L554; B: I38, R64, V66, A101, L186, P187, S211
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb c4G7-N
Chemical type: Region on multi-chain protein
Discontinuous residues: A: S41, T42, R136, Q251; B: A503, I504, V505, N506, A507, K510, N512, P513, N514, H516, E545, G546, L547, N550, D552, G553, C556, G557
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb FVM-09
Chemical type: Peptide from protein
Sequence: GEWAF
Position: 286-290
Source molecule (GenBank): AAB81004.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb c13C6
Chemical type: Discontinuous protein residues
Discontinuous residues: P116, D117, T223, L233, T240, N268, T269, T270, G271, K272, L273, I274, S307, F308
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb114
Chemical type: Discontinuous protein residues
Discontinuous residues: K114, K115, P116, D117, G118, E120, S142, G143, T144, G145, P146, Q221, T223, G224, T227, E231, L233, Y241, T269
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive
Reference: Thamotharampillai Dileepan; Deepali Malhotra; Dmitri I Kotov; Elizabeth M Kolawole; Peter D Krueger; Brian D Evavold; Marc K Jenkins. "MHC class II tetramers engineered for enhanced binding to CD4 improve detection of antigen-specific T cells." Nature biotechnology (2021).

Epitope: P5R
Chemical type: Peptide, no natural source
Sequence: EAQKARANKAVDKA
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GP66
Chemical type: Peptide from protein
Sequence: DIYKGVYQFKSV
Position: 66-77
Source molecule (GenBank): AAA46256.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: MOGp
Chemical type: Peptide from protein
Sequence: GWYRSPFSRVV
Position: 38-48
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: OVA3
Chemical type: Peptide, no natural source
Sequence: GHAAHAEINEA
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P31
Chemical type: Peptide, no natural source
Sequence: YVRPLWVRME
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Pin-Hung Lin; Chieh-Yu Liang; Bing-Yu Yao; Hui-Wen Chen; Ching-Fu Pan; Li-Ling Wu; Yi-Hsuan Lin; Yu-Sung Hsu; Yu-Han Liu; Pei-Jer Chen; Che-Ming Jack Hu; Hung-Chih Yang. "Robust induction of T<sub>RM</sub>s by combinatorial nanoshells confers cross-strain sterilizing immunity against lethal influenza viruses." Molecular therapy. Methods & clinical development (2021).

Epitope: NP 366–374 peptide I
Chemical type: Peptide from protein
Sequence: ASNENMETM
Position: 366-374
Source molecule (GenBank): CAA24268.1
Assay category: TCell
Result: Negative

Epitope: NP 366–374 peptide I
Chemical type: Peptide from protein
Sequence: ASNENMETM
Position: 366-374
Source molecule (GenBank): CAA24268.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: NP 366–374 peptide I
Chemical type: Peptide from protein
Sequence: ASNENMETM
Position: 366-374
Source molecule (GenBank): CAA24268.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: NP 311–325 peptide II
Chemical type: Peptide from protein
Sequence: QVYSLIRPNENPAHK
Position: 311-325
Source molecule (GenBank): CAA24268.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: NP 311–325 peptide II
Chemical type: Peptide from protein
Sequence: QVYSLIRPNENPAHK
Position: 311-325
Source molecule (GenBank): CAA24268.1
Assay category: TCell
Result: Negative

Epitope: NP 311–325 peptide II
Chemical type: Peptide from protein
Sequence: QVYSLIRPNENPAHK
Position: 311-325
Source molecule (GenBank): CAA24268.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Michael R Harvey; Fabrizio Chiodo; Wouter Noest; Cornelis H Hokke; Gijsbert A van der Marel; Jeroen D C Codée. "Synthesis and Antibody Binding Studies of Schistosome-Derived Oligo-α-(1-2)-l-Fucosides." Molecules (Basel, Switzerland) (2021).

Epitope: α-(1-2) oligofucoside Dimer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Dimer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Dimer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Dimer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Dimer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Dimer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Tetramer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Tetramer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Tetramer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Tetramer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Tetramer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-(1-2) oligofucoside Tetramer
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Reference: Hanzhi Zhang; Ching-Shin Huang; Xinchao Yu; Jonas Lee; Amit Vaish; Qing Chen; Mingyue Zhou; Zhulun Wang; Xiaoshan Min. "Cryo-EM structure of ABCG5/G8 in complex with modulating antibodies." Communications biology (2021).

Epitope: Epitope of 2E10 Fab on ABCG8
Chemical type: Discontinuous protein residues
Discontinuous residues: N34, S35, L36, Y37, F38, T39, S41, G42, Q43, P44, K186, E189, D190, R198, K260, N262
Source molecule (GenBank): Q9H221.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 2E10 Fab on ABCG8
Chemical type: Discontinuous protein residues
Discontinuous residues: N34, S35, L36, Y37, F38, T39, S41, G42, Q43, P44, K186, E189, D190, R198, K260, N262
Source molecule (GenBank): Q9H221.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.11

Epitope: Epitope of 2E10 Fab on ABCG8
Chemical type: Discontinuous protein residues
Discontinuous residues: N34, S35, L36, Y37, F38, T39, S41, G42, Q43, P44, K186, E189, D190, R198, K260, N262
Source molecule (GenBank): Q9H221.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 11F4 Fab on ABCG5/8
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E293, H294; B: Q302, T305, A306, I307, G308, Y309, P310, C311, P312, R313, Y314, F320, L324, E333, A337, E340, K341, S344
Source molecule (GenBank): Q9H222.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 11F4 Fab on ABCG5/8
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E293, H294; B: Q302, T305, A306, I307, G308, Y309, P310, C311, P312, R313, Y314, F320, L324, E333, A337, E340, K341, S344
Source molecule (GenBank): Q9H222.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.12

Epitope: Epitope of 11F4 Fab on ABCG5/8
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E293, H294; B: Q302, T305, A306, I307, G308, Y309, P310, C311, P312, R313, Y314, F320, L324, E333, A337, E340, K341, S344
Source molecule (GenBank): Q9H222.1
Assay category: BCell
Result: Positive
Reference: Annachiara Rosa; Valerie E Pye; Carl Graham; Luke Muir; Jeffrey Seow; Kevin W Ng; Nicola J Cook; Chloe Rees-Spear; Eleanor Parker; Mariana Silva Dos Santos; Carolina Rosadas; Alberto Susana; Hefin Rhys; Andrea Nans; Laura Masino; Chloe Roustan; Evangelos Christodoulou; Rachel Ulferts; Antoni G Wrobel; Charlotte-Eve Short; Michael Fertleman; Rogier W Sanders; Judith Heaney; Moira Spyer; Svend Kjær; Andy Riddell; Michael H Malim; Rupert Beale; James I MacRae; Graham P Taylor; Eleni Nastouli; Marit J van Gils; Peter B Rosenthal; Massimo Pizzato; Myra O McClure; Richard S Tedder; George Kassiotis; Laura E McCoy; Katie J Doores; Peter Cherepanov. "SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity." Science advances (2021).

Epitope: Epitope of P008_056 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: S71, K97, S98, T124, Y145, H146, K147, K150, S151, W152, E180, G181, K182, Q183, N185, V213, H245, S247, Y248, L249, T259, A260, A262
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of P008_056 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: S71, K97, S98, T124, Y145, H146, K147, K150, S151, W152, E180, G181, K182, Q183, N185, V213, H245, S247, Y248, L249, T259, A260, A262
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of P008_056 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: S71, K97, S98, T124, Y145, H146, K147, K150, S151, W152, E180, G181, K182, Q183, N185, V213, H245, S247, Y248, L249, T259, A260, A262
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of P008_056 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: S71, K97, S98, T124, Y145, H146, K147, K150, S151, W152, E180, G181, K182, Q183, N185, V213, H245, S247, Y248, L249, T259, A260, A262
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Reference: Deyong Song; Wenbo Wang; Chuangchuang Dong; Zhenfei Ning; Xiu Liu; Chuan Liu; Guangying Du; Chunjie Sha; Kailin Wang; Jun Lu; Baiping Sun; Yanyan Zhao; Qiaoping Wang; Hongguang Xu; Ying Li; Zhenduo Shen; Jie Jiao; Ruiying Wang; Jingwei Tian; Wanhui Liu; Lan Wang; Yong-Qiang Deng; Changlin Dou. "Structure and function analysis of a potent human neutralizing antibody CA521<sup>FALA</sup> against SARS-CoV-2." Communications biology (2021).

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Quantitative measurement: 6.508

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.698

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive

Epitope: Epitope of CA521(FALA) on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y449, Y453, L455, F456, A475, E484, G485, F486, N487, Y489, F490, Q493, S494
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Reference: Rebuma Firdessa-Fite; Stephanie N Johnson; Martin A Leon; Mohsen Khosravi-Maharlooei; Rocky L Baker; Joshua O Sestak; Cory Berkland; Remi J Creusot. "Soluble Antigen Arrays Efficiently Deliver Peptides and Arrest Spontaneous Autoimmune Diabetes." Diabetes (2021).

Epitope: P79 Tetramer
Chemical type: Peptide, no natural source
Sequence: AAAAVRPLWVRMEAA
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P79 Tetramer
Chemical type: Peptide, no natural source
Sequence: AAAAVRPLWVRMEAA
Assay category: TCell
Result: Negative
Host:  8 weeks

Epitope: P79 Tetramer
Chemical type: Peptide, no natural source
Sequence: AAAAVRPLWVRMEAA
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P79 Tetramer
Chemical type: Peptide, no natural source
Sequence: AAAAVRPLWVRMEAA
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P79 Tetramer
Chemical type: Peptide, no natural source
Sequence: AAAAVRPLWVRMEAA
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 2.5HIP Tetramer
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 2.5HIP Tetramer
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive-Low
Host:  8 weeks

Epitope: 2.5HIP Tetramer
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 2.5HIP Tetramer
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 2.5HIP Tetramer
Chemical type: Spliced peptide from proteins
Position: 75-80
Source molecule (GenBank): P01325.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo