LiteFold/IEDB huggingface dataset:
Reference: Tiago Fazolo; Rodrigo Benedetti Gassen; Deise Nascimento de Freitas; Thiago J Borges; Maurício Menegatti Rigo; Rodrigo Dornelles da Silva; Fábio Maito; Aline Cunha; Daniel Augusto Gasparin Bueno Mendes; André Báfica; José Eduardo Vargas; Ana Paula Duarte de Souza; Cristina Bonorino. "Vaccination with RSV M<sub>209-223</sub> peptide promotes a protective immune response associated with reduced pulmonary inflammation." Antiviral research (2018).

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: M 209-223
Chemical type: Peptide from protein
Sequence: NKGAFKYIKPQSQFI
Position: 209-223
Source molecule (GenBank): AEQ63649.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo
Reference: Shuyi Wang; Juan Xue; Ping Lu; Chunshan Ni; Hao Cheng; Rui Han; Stijn van der Veen. "Gonococcal MtrE and its surface-expressed Loop 2 are immunogenic and elicit bactericidal antibodies." The Journal of infection (2018).

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive
Host: F 6-9 weeks

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive
Host: F 6-9 weeks

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive
Host: F 6-9 weeks

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive
Host: F 6-9 weeks

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive
Host: F 6-9 weeks

Epitope: MtrE Loop 2 (319-331)
Chemical type: Peptide from protein
Sequence: SVELGGLFKSGTG
Position: 319-331
Source molecule (GenBank): CAA64891.1
Assay category: BCell
Result: Positive
Host: F 6-9 weeks
Reference: Matteo Bianchi; Hannah L Turner; Bartek Nogal; Christopher A Cottrell; David Oyen; Matthias Pauthner; Raiza Bastidas; Rebecca Nedellec; Laura E McCoy; Ian A Wilson; Dennis R Burton; Andrew B Ward; Lars Hangartner. "Electron-Microscopy-Based Epitope Mapping Defines Specificities of Polyclonal Antibodies Elicited during HIV-1 BG505 Envelope Trimer Immunization." Immunity (2018).

Epitope: Epitope of 10A Fab on HIV gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: H84, N87, T89, K228, D229, K230, K231, C238, P239, S240, A265, E266, E267, E268, N288, T289, K345
Source molecule (GenBank): Q2N0S6.1
Assay category: BCell
Result: Positive
Host: F 15 weeks

Epitope: Epitope of 10A Fab on HIV gp120
Chemical type: Discontinuous protein residues
Discontinuous residues: H84, N87, T89, K228, D229, K230, K231, C238, P239, S240, A265, E266, E267, E268, N288, T289, K345
Source molecule (GenBank): Q2N0S6.1
Assay category: BCell
Result: Positive
Host: F 15 weeks
Reference: Lien Van Hoecke; Sandra Van Lint; Kenny Roose; Alexander Van Parys; Peter Vandenabeele; Johan Grooten; Jan Tavernier; Stefaan De Koker; Xavier Saelens. "Treatment with mRNA coding for the necroptosis mediator MLKL induces antitumor immunity directed against neo-epitopes." Nature communications (2018).

Epitope: B16-M30 mut
Chemical type: Peptide, no natural source
Sequence: PSKPSFQEFVDWENVSPELNSTDQPFL
Assay category: TCell
Result: Positive
Host:  7-10 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: B16-M30 wt
Chemical type: Peptide from protein
Sequence: PSKPSFQEFVDWEKVSPELNSTDQPFL
Position: 726-752
Source molecule (GenBank): Q6PFD6.2
Assay category: TCell
Result: Negative
Host:  7-10 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: OVA 257-264 SIINFEKL
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 258-265
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: OVA 257-264 SIINFEKL
Chemical type: Peptide from protein
Sequence: SIINFEKL
Position: 258-265
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: OVA 323-339
Chemical type: Peptide from protein
Sequence: SQAVHAAHAEINEAGR
Position: 325-340
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: OVA 323-339
Chemical type: Peptide from protein
Sequence: SQAVHAAHAEINEAGR
Position: 325-340
Source molecule (GenBank): P01012.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Sarah Matko; Julia Manderla; Maria Bonsack; Marc Schmitz; Martin Bornhauser; Torsten Tonn; Marcus Odendahl. "PRAME peptide-specific CD8<sup>+</sup> T cells represent the predominant response against leukemia-associated antigens in healthy individuals." European journal of immunology (2018).

Epitope: PRA100
Chemical type: Peptide from protein
Sequence: VLDGLDVLL
Position: 100-108
Source molecule (GenBank): P78395.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PRA100
Chemical type: Peptide from protein
Sequence: VLDGLDVLL
Position: 100-108
Source molecule (GenBank): P78395.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PRA300
Chemical type: Peptide from protein
Sequence: ALYVDSLFFL
Position: 300-309
Source molecule (GenBank): P78395.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PRA300
Chemical type: Peptide from protein
Sequence: ALYVDSLFFL
Position: 300-309
Source molecule (GenBank): P78395.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Shahrooz Vahedi; Sabrina Lusvarghi; Kristen Pluchino; Yinon Shafrir; Stewart R Durell; Michael M Gottesman; Suresh V Ambudkar. "Mapping discontinuous epitopes for MRK-16, UIC2 and 4E3 antibodies to extracellular loops 1 and 4 of human P-glycoprotein." Scientific reports (2018).

Epitope: UIC2 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: I78, N81, A82, L85, E86, D87, L88, M89, S90, N91, I92, R95, D97, R741, I742, D743, D744, K748
Source molecule (GenBank): AAA59575.1
Assay category: BCell
Result: Positive
Quantitative measurement: 9.5

Epitope: MRK-16 and 4E3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E86, M89, S90, N91, R95, R741, I742, D743, D744, K748
Source molecule (GenBank): AAA59575.1
Assay category: BCell
Result: Positive
Host: F

Epitope: MRK-16 and 4E3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E86, M89, S90, N91, R95, R741, I742, D743, D744, K748
Source molecule (GenBank): AAA59575.1
Assay category: BCell
Result: Positive
Quantitative measurement: 9.9
Reference: Lusy Handoko; Bogumil Kaczkowski; Chung-Chau Hon; Marina Lizio; Masatoshi Wakamori; Takayoshi Matsuda; Takuhiro Ito; Prashanti Jeyamohan; Yuko Sato; Kensaku Sakamoto; Shigeyuki Yokoyama; Hiroshi Kimura; Aki Minoda; Takashi Umehara. "JQ1 affects BRD2-dependent and independent transcription regulation without disrupting H4-hyperacetylated chromatin states." Epigenetics (2018).

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive
Quantitative measurement: 1.7

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive
Quantitative measurement: 1.799

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: Di-acetylated histone H4 (H4K5acK8ac) peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGK
Position: 2-13
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: acetylated histone H4 peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGKGGAKRHR
Position: 2-20
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: acetylated histone H4 peptide
Chemical type: Peptide from protein
Sequence: SGRGKGGKGLGKGGAKRHR
Position: 2-20
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: acetylated histone H4 peptide
Chemical type: Peptide from protein
Sequence: GKGGAKRHRKVLRDNIQGIT
Position: 12-31
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: acetylated histone H4 peptide
Chemical type: Peptide from protein
Sequence: GKGGAKRHRKVLRDNIQGIT
Position: 12-31
Source molecule (GenBank): P62805.2
Assay category: BCell
Result: Positive

Epitope: acetylated histone H2B peptide
Chemical type: Peptide from protein
Sequence: PDPAKSAPAPKKGSKKAVT
Position: 2-20
Source molecule (GenBank): Q93079.3
Assay category: BCell
Result: Positive

Epitope: acetylated histone H2B peptide
Chemical type: Peptide from protein
Sequence: PDPAKSAPAPKKGSKKAVT
Position: 2-20
Source molecule (GenBank): Q93079.3
Assay category: BCell
Result: Positive
Reference: Kaare Bjerregaard-Andersen; Hedda Johannesen; Noha Abdel-Rahman; Julie Elisabeth Heggelund; Helene Mykland Hoås; Fana Abraha; Paula A Bousquet; Lene Støkken Høydahl; Daniel Burschowsky; Gertrudis Rojas; Stefan Oscarson; Geir Åge Løset; Ute Krengel. "Crystal structure of an L chain optimised 14F7 anti-ganglioside Fv suggests a unique tumour-specificity through an unusual H-chain CDR3 architecture." Scientific reports (2018).

Epitope: NeuGc GM3
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 3.5
Host: F 6-8 weeks
Reference: Zhe Chen; Linlin Bao; Cong Chen; Tingting Zou; Ying Xue; Fengdi Li; Qi Lv; Songzhi Gu; Xiaopan Gao; Sheng Cui; Jianmin Wang; Chuan Qin; Qi Jin. "Human Neutralizing Monoclonal Antibody Inhibition of Middle East Respiratory Syndrome Coronavirus Replication in the Common Marmoset." The Journal of infectious diseases (2017).

Epitope: Epitope of MCA1 Fab on MERS-CoV RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: D510, I529, P531, W535, E536, D539, Y540, Y541, R542, K543, Q544, W553
Source molecule (GenBank): K9N5Q8.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.703

Epitope: Epitope of MCA1 Fab on MERS-CoV RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: D510, I529, P531, W535, E536, D539, Y540, Y541, R542, K543, Q544, W553
Source molecule (GenBank): K9N5Q8.1
Assay category: BCell
Result: Positive

Epitope: Epitope of MCA1 Fab on MERS-CoV RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: D510, I529, P531, W535, E536, D539, Y540, Y541, R542, K543, Q544, W553
Source molecule (GenBank): K9N5Q8.1
Assay category: BCell
Result: Positive
Reference: Yan Wu; Feng Gao; Jun Liu; Jianxun Qi; Emma Gostick; David A Price; George F Gao. "Structural basis of diverse peptide accommodation by the rhesus macaque MHC class I molecule Mamu-B*17: insights into immune protection from simian immunodeficiency virus." Journal of immunology (Baltimore, Md. : 1950) (2011).

Epitope: Pol FW9
Chemical type: Peptide from protein
Sequence: FQWMGYELW
Position: 435-443
Source molecule (GenBank): AAU14024.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.4

Epitope: Nef IW9
Chemical type: Peptide from protein
Sequence: IRYPKTFGW
Position: 165-173
Source molecule (GenBank): AQY14404.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.502

Epitope: Nef IW11
Chemical type: Peptide from protein
Sequence: IRYPKTFGWLW
Position: 165-175
Source molecule (GenBank): AQY14404.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.602

Epitope: Nef QW9
Chemical type: Peptide from protein
Sequence: QTSQWDDPW
Position: 199-207
Source molecule (GenBank): AQY14404.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.6

Epitope: Nef MW9
Chemical type: Peptide from protein
Sequence: MHPAQTSQW
Position: 195-203
Source molecule (GenBank): AQY14404.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.1

Epitope: Pol MF8
Chemical type: Peptide from protein
Sequence: MRHVLEPF
Position: 372-379
Source molecule (GenBank): AAU14024.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.6

Epitope: Vif HW8
Chemical type: Peptide from protein
Sequence: HLEVQGYW
Position: 66-73
Source molecule (GenBank): AAA47634.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.009

Epitope: Vif GW10
Chemical type: Peptide from protein
Sequence: GSHLEVQGYW
Position: 64-73
Source molecule (GenBank): AAA47634.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.7
Reference: April Ross; Jean Wu; Colin Carlock; William Glass; Ya-Huan Lou. "Inter-molecular epitope spreading does not lead to extension of autoimmunity beyond target tissue in autoimmune glomerulonephritis." PloS one (2018).

Epitope: pCol4alpha3 28-40
Chemical type: Peptide from protein
Sequence: SQTTANPSCPEGT
Position: 12-24
Source molecule (GenBank): AAB72238.2
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pCol4alpha3 28-40
Chemical type: Peptide from protein
Sequence: SQTTANPSCPEGT
Position: 12-24
Source molecule (GenBank): AAB72238.2
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pCol4alpha3 28-40
Chemical type: Peptide from protein
Sequence: SQTTANPSCPEGT
Position: 12-24
Source molecule (GenBank): AAB72238.2
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pCol4alpha3 28-40
Chemical type: Peptide from protein
Sequence: SQTTANPSCPEGT
Position: 12-24
Source molecule (GenBank): AAB72238.2
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pCol4alpha4
Chemical type: Peptide from protein
Sequence: QSIPPCPQTWRSLWI
Position: 1425-1439
Source molecule (GenBank): XP_006226972.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pCol4alpha4
Chemical type: Peptide from protein
Sequence: QSIPPCPQTWRSLWI
Position: 1425-1439
Source molecule (GenBank): XP_006226972.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pLam beta1
Chemical type: Peptide from protein
Sequence: KTWGVYRYFAYDCES
Position: 206-220
Source molecule (GenBank): XP_017458651.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pLam beta1
Chemical type: Peptide from protein
Sequence: KTWGVYRYFAYDCES
Position: 206-220
Source molecule (GenBank): XP_017458651.1
Assay category: BCell
Result: Positive-Low
Host: F 4-6 weeks

Epitope: pLam alpha1
Chemical type: Peptide from protein
Sequence: TLDLRQVFQVAYVII
Position: 117-131
Source molecule (GenBank): NP_001101707.2
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pLam alpha1
Chemical type: Peptide from protein
Sequence: TLDLRQVFQVAYVII
Position: 117-131
Source molecule (GenBank): NP_001101707.2
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pLam alpha5
Chemical type: Peptide from protein
Sequence: LCDELTGQCICPPRTV
Position: 1494-1509
Source molecule (GenBank): NP_001178538.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: pLam alpha5
Chemical type: Peptide from protein
Sequence: LCDELTGQCICPPRTV
Position: 1494-1509
Source molecule (GenBank): NP_001178538.1
Assay category: BCell
Result: Positive-Low
Host: F 4-6 weeks
Reference: Satoshi Aono; Tomohide Tatsumi; Teppei Yoshioka; Seiichi Tawara; Akira Nishio; Yoshiki Onishi; Keisuke Fukutomi; Tasuku Nakabori; Takahiro Kodama; Minoru Shigekawa; Hayato Hikita; Ryotaro Sakamori; Takeshi Takahashi; Hiroshi Suemizu; Tetsuo Takehara. "Immunological responses against hepatitis B virus in human peripheral blood mononuclear cell-engrafted mice." Biochemical and biophysical research communications (2018).

Epitope: FLPSDFFPSV
Chemical type: Peptide from protein
Sequence: FLPSDFFPSV
Position: 47-56
Source molecule (GenBank): Q9QMH8.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: liver
Culture conditions: Direct Ex Vivo

Epitope: FLPSDFFPSV
Chemical type: Peptide from protein
Sequence: FLPSDFFPSV
Position: 47-56
Source molecule (GenBank): Q9QMH8.1
Assay category: TCell
Result: Positive
Host:  6-10 weeks
Cell type: T cell CD8+
Tissue: liver
Culture conditions: Direct Ex Vivo
Reference: Julia C Frei; Ariel S Wirchnianski; Jennifer Govero; Olivia Vergnolle; Kimberly A Dowd; Theodore C Pierson; Margaret Kielian; Mark E Girvin; Michael S Diamond; Jonathan R Lai. "Engineered Dengue Virus Domain III Proteins Elicit Cross-Neutralizing Antibody Responses in Mice." Journal of virology (2018).

Epitope: mAb 4E11 (A/G strand-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: S585, F586, K587, L588, E589, K590, E591, V592, Q603, K605, E607, E642, K643, P644, L667, K668, L669, S670, W671
Source molecule (GenBank): Q9II01
Assay category: BCell
Result: Positive
Quantitative measurement: 0.01
Host:  3 weeks

Epitope: mAb 4E11 (A/G strand-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: S585, F586, K587, L588, E589, K590, E591, V592, Q603, K605, E607, E642, K643, P644, L667, K668, L669, S670, W671
Source molecule (GenBank): Q9II01
Assay category: BCell
Result: Positive
Quantitative measurement: 1400000.0
Host:  3 weeks

Epitope: mAb 4E11 (A/G strand-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: S585, F586, K587, L588, E589, K590, E591, V592, Q603, K605, E607, E642, K643, P644, L667, K668, L669, S670, W671
Source molecule (GenBank): Q9II01
Assay category: BCell
Result: Positive
Quantitative measurement: 0.000019
Host:  3 weeks

Epitope: mAb 4E11 (A/G strand-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: S585, F586, K587, L588, E589, K590, E591, V592, Q603, K605, E607, E642, K643, P644, L667, K668, L669, S670, W671
Source molecule (GenBank): Q9II01
Assay category: BCell
Result: Positive
Host:  3 weeks

Epitope: mAb 3H5 (FG loop-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K305, P384
Source molecule (GenBank): NP_739583.2
Assay category: BCell
Result: Positive

Epitope: mAb 3H5 (FG loop-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K305, P384
Source molecule (GenBank): NP_739583.2
Assay category: BCell
Result: Positive
Quantitative measurement: 120.0

Epitope: mAb 3H5 (FG loop-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K305, P384
Source molecule (GenBank): NP_739583.2
Assay category: BCell
Result: Positive
Quantitative measurement: 1400.0

Epitope: mAb 3H5 (FG loop-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K305, P384
Source molecule (GenBank): NP_739583.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00016

Epitope: mAb 4E5A (A/G strand-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: L588, K590, L667, K668, L669, W671
Source molecule (GenBank): Q9II01
Assay category: BCell
Result: Positive
Host:  3 weeks

Epitope: mAb WNV-E111 (AB loop-specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: V300, M301, K334, P336, F337, S338, S339, Q340, E342, K343, G344, V345, T346, Q347, G349, R350, L351, P372, V379, A382, G383, E384
Source molecule (GenBank): AAZ43213.1
Assay category: BCell
Result: Positive
Reference: Young Jae Lee; Ji Eun Yu; Paul Kim; Jeong-Yoon Lee; Yu Cheol Cheong; Yoon Jae Lee; Jun Chang; Baik Lin Seong. "Eliciting unnatural immune responses by activating cryptic epitopes in viral antigens." FASEB journal : official publication of the Federation of American Societies for Experimental Biology (2018).

Epitope: CE Cryptic Epitope
Chemical type: Peptide, no natural source
Sequence: LSMPFHNIHPLTIGECPKYVKSVR
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: CE Cryptic Epitope
Chemical type: Peptide, no natural source
Sequence: LSMPFHNIHPLTIGECPKYVKSVR
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: CE Cryptic Epitope
Chemical type: Peptide, no natural source
Sequence: LSMPFHNIHPLTIGECPKYVKSVR
Assay category: TCell
Result: Positive
Host: F 6 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo