Reference: Ekaterina Garanina; Shaimaa Hamza; Robert J Stott-Marshall; Ekaterina Martynova; Maria Markelova; Yuriy Davidyuk; Venera Shakirova; Neha Kaushal; Manoj Baranwal; Ilsiyar M Khaertynova; Albert Rizvanov; Toshana L Foster; Svetlana Khaiboullina. "Antibody and T Cell Immune Responses to SARS-CoV-2 Peptides in COVID-19 Convalescent Patients." Frontiers in microbiology (2022).

Epitope: S1
Chemical type: Peptide from protein
Sequence: KLQDVVNQNAQALNTLVKQL
Position: 947-966
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S1
Chemical type: Peptide from protein
Sequence: KLQDVVNQNAQALNTLVKQL
Position: 947-966
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S1
Chemical type: Peptide from protein
Sequence: KLQDVVNQNAQALNTLVKQL
Position: 947-966
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S2
Chemical type: Peptide from protein
Sequence: VEAEVQIDRLITGRLQSLQT
Position: 987-1006
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S2
Chemical type: Peptide from protein
Sequence: VEAEVQIDRLITGRLQSLQT
Position: 987-1006
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low

Epitope: S3
Chemical type: Peptide from protein
Sequence: RLNEVAKNLNESLIDLQELG
Position: 1185-1204
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low

Epitope: S3
Chemical type: Peptide from protein
Sequence: RLNEVAKNLNESLIDLQELG
Position: 1185-1204
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S5
Chemical type: Peptide from protein
Sequence: ECDIPIGAGICASYQTQTNS
Position: 661-680
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S5
Chemical type: Peptide from protein
Sequence: ECDIPIGAGICASYQTQTNS
Position: 661-680
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low

Epitope: S7
Chemical type: Peptide from protein
Sequence: STECSNLLLQYGSFCTQLNR
Position: 746-765
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S7
Chemical type: Peptide from protein
Sequence: STECSNLLLQYGSFCTQLNR
Position: 746-765
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S7
Chemical type: Peptide from protein
Sequence: STECSNLLLQYGSFCTQLNR
Position: 746-765
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S8
Chemical type: Peptide from protein
Sequence: NDILSRLDKVEAEVQIDRLI
Position: 978-997
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S8
Chemical type: Peptide from protein
Sequence: NDILSRLDKVEAEVQIDRLI
Position: 978-997
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low

Epitope: S9
Chemical type: Peptide from protein
Sequence: KSFTVEKGIYQTSNFRVQPT
Position: 304-323
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S9
Chemical type: Peptide from protein
Sequence: KSFTVEKGIYQTSNFRVQPT
Position: 304-323
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S10
Chemical type: Peptide from protein
Sequence: FKNHTSPDVDLGDISGINAS
Position: 1156-1175
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S10
Chemical type: Peptide from protein
Sequence: FKNHTSPDVDLGDISGINAS
Position: 1156-1175
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S10
Chemical type: Peptide from protein
Sequence: FKNHTSPDVDLGDISGINAS
Position: 1156-1175
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S14
Chemical type: Peptide from protein
Sequence: AQALNTLVKQLSSNFGAISS
Position: 956-975
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S14
Chemical type: Peptide from protein
Sequence: AQALNTLVKQLSSNFGAISS
Position: 956-975
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S15
Chemical type: Peptide from protein
Sequence: TQQLIRAAEIRASANLAATK
Position: 1009-1028
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S15
Chemical type: Peptide from protein
Sequence: TQQLIRAAEIRASANLAATK
Position: 1009-1028
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S15
Chemical type: Peptide from protein
Sequence: TQQLIRAAEIRASANLAATK
Position: 1009-1028
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S17
Chemical type: Peptide from protein
Sequence: RASANLAATKMSECVLGQSK
Position: 1019-1038
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S17
Chemical type: Peptide from protein
Sequence: RASANLAATKMSECVLGQSK
Position: 1019-1038
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low

Epitope: S18
Chemical type: Peptide from protein
Sequence: DRLITGRLQSLQTYVTQQLI
Position: 994-1013
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S18
Chemical type: Peptide from protein
Sequence: DRLITGRLQSLQTYVTQQLI
Position: 994-1013
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S19
Chemical type: Peptide from protein
Sequence: QSLQTYVTQQLIRAAEIRAS
Position: 1002-1021
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S19
Chemical type: Peptide from protein
Sequence: QSLQTYVTQQLIRAAEIRAS
Position: 1002-1021
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Negative

Epitope: S21
Chemical type: Peptide from protein
Sequence: LGFIAGLIAIVMVTIM
Position: 1218-1233
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: S21
Chemical type: Peptide from protein
Sequence: LGFIAGLIAIVMVTIM
Position: 1218-1233
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: N1
Chemical type: Peptide from protein
Sequence: SAFFGMSRIGMEVTPSGTWL
Position: 312-331
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N1
Chemical type: Peptide from protein
Sequence: SAFFGMSRIGMEVTPSGTWL
Position: 312-331
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-Low

Epitope: N2
Chemical type: Peptide from protein
Sequence: GLPNNTASWFTALTQHGKED
Position: 44-63
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-Low

Epitope: N2
Chemical type: Peptide from protein
Sequence: GLPNNTASWFTALTQHGKED
Position: 44-63
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N3
Chemical type: Peptide from protein
Sequence: QLPQGTTLPKGFYAEGSRGG
Position: 160-179
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N3
Chemical type: Peptide from protein
Sequence: QLPQGTTLPKGFYAEGSRGG
Position: 160-179
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-Low

Epitope: N4
Chemical type: Peptide from protein
Sequence: ELIRQGTDYKHWPQIAQFAP
Position: 290-309
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N4
Chemical type: Peptide from protein
Sequence: ELIRQGTDYKHWPQIAQFAP
Position: 290-309
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-Low

Epitope: N6
Chemical type: Peptide from protein
Sequence: KHWPQIAQFAPSASAFFGMS
Position: 299-318
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N6
Chemical type: Peptide from protein
Sequence: KHWPQIAQFAPSASAFFGMS
Position: 299-318
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-Low

Epitope: N6
Chemical type: Peptide from protein
Sequence: KHWPQIAQFAPSASAFFGMS
Position: 299-318
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: N6
Chemical type: Peptide from protein
Sequence: KHWPQIAQFAPSASAFFGMS
Position: 299-318
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: N7
Chemical type: Peptide from protein
Sequence: YNVTQAFGRRGPEQTQGNFG
Position: 268-287
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N7
Chemical type: Peptide from protein
Sequence: YNVTQAFGRRGPEQTQGNFG
Position: 268-287
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N9
Chemical type: Peptide from protein
Sequence: QQTVTLLPAADLDDFSKQ
Position: 389-406
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N9
Chemical type: Peptide from protein
Sequence: QQTVTLLPAADLDDFSKQ
Position: 389-406
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N16
Chemical type: Peptide from protein
Sequence: GSRGGSQASSRSSSRSRNSS
Position: 175-194
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N16
Chemical type: Peptide from protein
Sequence: GSRGGSQASSRSSSRSRNSS
Position: 175-194
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive

Epitope: N19
Chemical type: Peptide from protein
Sequence: RNPANNAAIVLQLPQGTTLP
Position: 149-168
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: N19
Chemical type: Peptide from protein
Sequence: RNPANNAAIVLQLPQGTTLP
Position: 149-168
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NL63.N1
Chemical type: Peptide from protein
Sequence: RVIPRNLVPIGKGNKDEQI
Position: 35-53
Source molecule (GenBank): YP_003771.1
Assay category: BCell
Result: Positive

Epitope: NL63.N1
Chemical type: Peptide from protein
Sequence: RVIPRNLVPIGKGNKDEQI
Position: 35-53
Source molecule (GenBank): YP_003771.1
Assay category: BCell
Result: Positive

Epitope: NL63.N2
Chemical type: Peptide from protein
Sequence: EGAKTVNTSLGNRKRNQKPL
Position: 104-123
Source molecule (GenBank): YP_003771.1
Assay category: BCell
Result: Positive

Epitope: NL63.N2
Chemical type: Peptide from protein
Sequence: EGAKTVNTSLGNRKRNQKPL
Position: 104-123
Source molecule (GenBank): YP_003771.1
Assay category: BCell
Result: Positive

Epitope: NL63.N3
Chemical type: Peptide from protein
Sequence: EVSTDEVGDNVQITYTYKM
Position: 292-310
Source molecule (GenBank): YP_003771.1
Assay category: BCell
Result: Positive

Epitope: NL63.N3
Chemical type: Peptide from protein
Sequence: EVSTDEVGDNVQITYTYKM
Position: 292-310
Source molecule (GenBank): YP_003771.1
Assay category: BCell
Result: Positive

Epitope: NL63.S1
Chemical type: Peptide from protein
Sequence: NWADDRAARKKFPPPSFYMP
Position: 5-24
Source molecule (GenBank): AMM42589.1
Assay category: BCell
Result: Positive

Epitope: NL63.S1
Chemical type: Peptide from protein
Sequence: NWADDRAARKKFPPPSFYMP
Position: 5-24
Source molecule (GenBank): AMM42589.1
Assay category: BCell
Result: Positive

Epitope: NL63.S2
Chemical type: Peptide from protein
Sequence: ISNSIQAIYDRLDSIQADQQ
Position: 1039-1058
Source molecule (GenBank): AKT07952.1
Assay category: BCell
Result: Positive

Epitope: NL63.S2
Chemical type: Peptide from protein
Sequence: ISNSIQAIYDRLDSIQADQQ
Position: 1039-1058
Source molecule (GenBank): AKT07952.1
Assay category: BCell
Result: Positive

Epitope: NL63.S3
Chemical type: Peptide from protein
Sequence: GYTDNIFSVQQDGRIPNGFP
Position: 212-231
Source molecule (GenBank): AKT07952.1
Assay category: BCell
Result: Positive

Epitope: NL63.S3
Chemical type: Peptide from protein
Sequence: GYTDNIFSVQQDGRIPNGFP
Position: 212-231
Source molecule (GenBank): AKT07952.1
Assay category: BCell
Result: Positive

Epitope: OC43.N1
Chemical type: Peptide from protein
Sequence: FVEGQGVPIAPGVPATEAKG
Position: 80-99
Source molecule (GenBank): YP_009555245.1
Assay category: BCell
Result: Positive

Epitope: OC43.N1
Chemical type: Peptide from protein
Sequence: FVEGQGVPIAPGVPATEAKG
Position: 80-99
Source molecule (GenBank): YP_009555245.1
Assay category: BCell
Result: Positive

Epitope: OC43.N2
Chemical type: Peptide from protein
Sequence: ADQSDQFRNVQTRGRRAQPK
Position: 27-46
Source molecule (GenBank): YP_009555245.1
Assay category: BCell
Result: Positive

Epitope: OC43.N2
Chemical type: Peptide from protein
Sequence: ADQSDQFRNVQTRGRRAQPK
Position: 27-46
Source molecule (GenBank): YP_009555245.1
Assay category: BCell
Result: Positive

Epitope: OC43.N3
Chemical type: Peptide from protein
Sequence: RLELAKVQNLSGNPDEPQKD
Position: 328-347
Source molecule (GenBank): YP_009555245.1
Assay category: BCell
Result: Positive

Epitope: OC43.N3
Chemical type: Peptide from protein
Sequence: RLELAKVQNLSGNPDEPQKD
Position: 328-347
Source molecule (GenBank): YP_009555245.1
Assay category: BCell
Result: Positive

Epitope: OC43.S1
Chemical type: Peptide from protein
Sequence: DVYRRKPDLPNCNIEAW
Position: 333-349
Source molecule (GenBank): APU51916.1
Assay category: BCell
Result: Positive

Epitope: OC43.S1
Chemical type: Peptide from protein
Sequence: DVYRRKPDLPNCNIEAW
Position: 333-349
Source molecule (GenBank): APU51916.1
Assay category: BCell
Result: Positive

Epitope: OC43.S2
Chemical type: Peptide from protein
Sequence: GEHCSGLAVKSDYCGNNSCT
Position: 553-572
Source molecule (GenBank): APU51916.1
Assay category: BCell
Result: Positive

Epitope: OC43.S2
Chemical type: Peptide from protein
Sequence: GEHCSGLAVKSDYCGNNSCT
Position: 553-572
Source molecule (GenBank): APU51916.1
Assay category: BCell
Result: Positive

Epitope: OC43.S3
Chemical type: Peptide from protein
Sequence: CTLDPITLKAPDTYKCPQSK
Position: 528-547
Source molecule (GenBank): APU51916.1
Assay category: BCell
Result: Positive

Epitope: OC43.S3
Chemical type: Peptide from protein
Sequence: CTLDPITLKAPDTYKCPQSK
Position: 528-547
Source molecule (GenBank): APU51916.1
Assay category: BCell
Result: Positive

Epitope: HKU1.N1
Chemical type: Peptide from protein
Sequence: RSGILKKTSWADQSERNYQT
Position: 18-37
Source molecule (GenBank): YP_173242.1
Assay category: BCell
Result: Positive

Epitope: HKU1.N1
Chemical type: Peptide from protein
Sequence: RSGILKKTSWADQSERNYQT
Position: 18-37
Source molecule (GenBank): YP_173242.1
Assay category: BCell
Result: Positive

Epitope: HKU1.N2
Chemical type: Peptide from protein
Sequence: AFGVPPSEAKGYWYRHSRRS
Position: 88-107
Source molecule (GenBank): YP_173242.1
Assay category: BCell
Result: Positive

Epitope: HKU1.N2
Chemical type: Peptide from protein
Sequence: AFGVPPSEAKGYWYRHSRRS
Position: 88-107
Source molecule (GenBank): YP_173242.1
Assay category: BCell
Result: Positive

Epitope: HKU1.N3
Chemical type: Peptide from protein
Sequence: SNDFTPEDHSLLATLDDPYV
Position: 417-436
Source molecule (GenBank): YP_173242.1
Assay category: BCell
Result: Positive

Epitope: HKU1.N3
Chemical type: Peptide from protein
Sequence: SNDFTPEDHSLLATLDDPYV
Position: 417-436
Source molecule (GenBank): YP_173242.1
Assay category: BCell
Result: Positive

Epitope: HKU-1.S1
Chemical type: Peptide from protein
Sequence: YNSPSSSSSRRKRRSISASY
Position: 747-766
Source molecule (GenBank): YP_173238.1
Assay category: BCell
Result: Positive

Epitope: HKU-1.S1
Chemical type: Peptide from protein
Sequence: YNSPSSSSSRRKRRSISASY
Position: 747-766
Source molecule (GenBank): YP_173238.1
Assay category: BCell
Result: Positive

Epitope: HKU-1.S2
Chemical type: Peptide from protein
Sequence: DHTDWCRCSCLPDPITAYDP
Position: 511-530
Source molecule (GenBank): YP_173238.1
Assay category: BCell
Result: Positive

Epitope: HKU-1.S2
Chemical type: Peptide from protein
Sequence: DHTDWCRCSCLPDPITAYDP
Position: 511-530
Source molecule (GenBank): YP_173238.1
Assay category: BCell
Result: Positive

Epitope: HKU-1.S3
Chemical type: Peptide from protein
Sequence: ATVAAMFPPWSAAAGIPF
Position: 966-983
Source molecule (GenBank): YP_173238.1
Assay category: BCell
Result: Positive

Epitope: HKU-1.S3
Chemical type: Peptide from protein
Sequence: ATVAAMFPPWSAAAGIPF
Position: 966-983
Source molecule (GenBank): YP_173238.1
Assay category: BCell
Result: Positive

Epitope: 229E.N1
Chemical type: Peptide from protein
Sequence: TKEQKHEMQKPRWKRQPNDD
Position: 237-256
Source molecule (GenBank): NP_073556.1
Assay category: BCell
Result: Positive

Epitope: 229E.N1
Chemical type: Peptide from protein
Sequence: TKEQKHEMQKPRWKRQPNDD
Position: 237-256
Source molecule (GenBank): NP_073556.1
Assay category: BCell
Result: Positive

Epitope: 229E.N2
Chemical type: Peptide from protein
Sequence: WADASEPQRGRQGRIPYSLY
Position: 6-25
Source molecule (GenBank): NP_073556.1
Assay category: BCell
Result: Positive

Epitope: 229E.N2
Chemical type: Peptide from protein
Sequence: WADASEPQRGRQGRIPYSLY
Position: 6-25
Source molecule (GenBank): NP_073556.1
Assay category: BCell
Result: Positive

Epitope: 229E.N3
Chemical type: Peptide from protein
Sequence: VVEEPDSRAPSRSQSRSQSR
Position: 139-158
Source molecule (GenBank): NP_073556.1
Assay category: BCell
Result: Positive

Epitope: 229E.N3
Chemical type: Peptide from protein
Sequence: VVEEPDSRAPSRSQSRSQSR
Position: 139-158
Source molecule (GenBank): NP_073556.1
Assay category: BCell
Result: Positive

Epitope: 229E.S3
Chemical type: Peptide from protein
Sequence: YNLSSVIPSLPRSGSRVAGR
Position: 668-687
Source molecule (GenBank): AWH62679.1
Assay category: BCell
Result: Positive

Epitope: 229E.S3
Chemical type: Peptide from protein
Sequence: YNLSSVIPSLPRSGSRVAGR
Position: 668-687
Source molecule (GenBank): AWH62679.1
Assay category: BCell
Result: Positive