LiteFold/IEDB huggingface dataset:
Reference: A Monsonego; R Maron; V Zota; D J Selkoe; H L Weiner. "Immune hyporesponsiveness to amyloid beta-peptide in amyloid precursor protein transgenic mice: implications for the pathogenesis and treatment of Alzheimer's disease." Proceedings of the National Academy of Sciences of the United States of America (2001).

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: BCell
Result: Positive-Low
Host:  5 weeks

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: BCell
Result: Positive-Low
Host:  5 weeks

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: BCell
Result: Positive-Low
Host:  5 weeks

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Amyloid beta (1-40)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
Position: 672-711
Source molecule (GenBank): P05067.3
Assay category: TCell
Result: Positive-Low
Host:  5 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Mayumi Tamura; Akira Yamada; Yukari Takao; Satoko Matsueda; Nobukazu Komatsu; Shigeru Yutani; Tatsuya Ide; Michio Sata; Kyogo Itoh. "Identification of hepatitis C virus 1b-derived peptides recognized by both cellular and humoral immune systems in HCV1b(+) HLA-A24(+) patients." Hepatology research : the official journal of the Japan Society of Hepatology (2005).

Epitope: E2 717-725
Chemical type: Peptide from protein
Sequence: EYVLLLFLL
Position: 717-725
Source molecule (GenBank): BAA03375.1
Assay category: BCell
Result: Positive

Epitope: E2 717-725
Chemical type: Peptide from protein
Sequence: EYVLLLFLL
Position: 717-725
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: E2 717-725
Chemical type: Peptide from protein
Sequence: EYVLLLFLL
Position: 717-725
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NS4B 1727-1735.2
Chemical type: Peptide from protein
Sequence: QFKQKALGL
Position: 1727-1735
Source molecule (GenBank): BAA03375.1
Assay category: BCell
Result: Negative
Reference: Andrew J Godkin; Howard C Thomas; Peter J Openshaw. "Evolution of epitope-specific memory CD4(+) T cells after clearance of hepatitis C virus." Journal of immunology (Baltimore, Md. : 1950) (2002).

Epitope: Core 141-155
Chemical type: Peptide from protein
Sequence: GAPLGGAARALAHGV
Position: 141-155
Source molecule (GenBank): AAS15464.1
Assay category: TCell
Result: Positive
Host:  42-70 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core 141-155
Chemical type: Peptide from protein
Sequence: GAPLGGAARALAHGV
Position: 141-155
Source molecule (GenBank): AAS15464.1
Assay category: TCell
Result: Positive
Host:  42-70 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Angus J MacDonald; Margaret Duffy; Miriam T Brady; Susan McKiernan; William Hall; John Hegarty; Michael Curry; Kingston H G Mills. "CD4 T helper type 1 and regulatory T cells induced against the same epitopes on the core protein in hepatitis C virus-infected persons." The Journal of infectious diseases (2002).

Epitope: Core 11-30
Chemical type: Peptide from protein
Sequence: TKRNTNRRPQDVKFPGGGQI
Position: 11-30
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
MHC allele types: 413 321
Host: F 41-55
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core 31-50
Chemical type: Peptide from protein
Sequence: VGGVYLLPRRGPRLGVRATR
Position: 31-50
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Host: F 41-55
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core 31-50
Chemical type: Peptide from protein
Sequence: VGGVYLLPRRGPRLGVRATR
Position: 31-50
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Host: F 41-55
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core 31-50
Chemical type: Peptide from protein
Sequence: VGGVYLLPRRGPRLGVRATR
Position: 31-50
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
MHC allele types: 413 52 436 316 321
Host: F 41-55
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core 31-50
Chemical type: Peptide from protein
Sequence: VGGVYLLPRRGPRLGVRATR
Position: 31-50
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Negative
Host: F 41-55
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: K Kurokohchi; K Arima; M Nishioka. "A novel cytotoxic T-cell epitope presented by HLA-A24 molecule in hepatitis C virus infection." Journal of hepatology (2001).

Epitope: HCV NS3 A24-4-2
Chemical type: Peptide from protein
Sequence: AYAQQTRGL
Position: 1031-1039
Source molecule (GenBank): P27958.3
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: S Schweitzer; A M Schneiders; B Langhans; W Kraas; G Jung; O Vidalin; G Inchauspe; T Sauerbruch; U Spengler. "Flow cytometric analysis of peptide binding to major histocampatibility complex class I for hepatitis C virus core T-cell epitopes." Cytometry. (2000).

Epitope: Peptide 4
Chemical type: Peptide from protein
Sequence: PQRKTKRNTN
Position: 7-16
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive

Epitope: Peptide 4
Chemical type: Peptide from protein
Sequence: PQRKTKRNTN
Position: 7-16
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 10
Chemical type: Peptide from protein
Sequence: PLDVKFPGGG
Position: 19-28
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 17
Chemical type: Peptide from protein
Sequence: GVYLLPRRGP
Position: 33-42
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 21
Chemical type: Peptide from protein
Sequence: GPRLGVRATR
Position: 41-50
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 27
Chemical type: Peptide from protein
Sequence: SERSQPRGRR
Position: 53-62
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 29
Chemical type: Peptide from protein
Sequence: QPRGRRQPIP
Position: 57-66
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 48
Chemical type: Peptide from protein
Sequence: SRPSWGPTDP
Position: 103-112
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 61
Chemical type: Peptide from protein
Sequence: KVIDTLTCGL
Position: 121-130
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Negative

Epitope: Peptide 61
Chemical type: Peptide from protein
Sequence: KVIDTLTCGL
Position: 121-130
Source molecule (GenBank): AAK19138.1
Assay category: MhcBinding
Result: Positive
Reference: U Wienhues; H G Ihlenfeldt; C Seidel; U Schmitt; W Kraas; G Jung. "Characterization of a linear epitope in the nonstructural region 4 of hepatitis C virus with reactivity to seroconversion antibodies." Virology (1998).

Epitope: 18H3
Chemical type: Peptide from protein
Sequence: IIPDREVLYREFDEMEECSQHLPYI
Position: 1694-1718
Source molecule (GenBank): BAA01582.1
Assay category: BCell
Result: Positive

Epitope: 20D3
Chemical type: Peptide from protein
Sequence: LAEQFKQKALGLLQTASRQAEVIAP
Position: 1724-1748
Source molecule (GenBank): BAA01582.1
Assay category: BCell
Result: Positive

Epitope: 20F3
Chemical type: Peptide from protein
Sequence: GLGKVLIDILAGYGAGVAGALVAFK
Position: 1393-1417
Source molecule (GenBank): AAA45677.1
Assay category: BCell
Result: Negative

Epitope: 20G6
Chemical type: Peptide from protein
Sequence: HYVPESDAAARVTAILSSLTVTQLL
Position: 1933-1957
Source molecule (GenBank): BAA01582.1
Assay category: BCell
Result: Negative
Reference: J Söderholm; G Ahlén; A Kaul; L Frelin; M Alheim; C Barnfield; P Liljeström; O Weiland; D R Milich; R Bartenschlager; M Sällberg. "Relation between viral fitness and immune escape within the hepatitis C virus protease." Gut (2006).

Epitope: P24
Chemical type: Peptide, no natural source
Sequence: HITQQHRPVSDT
Assay category: BCell
Result: Positive

Epitope: P24
Chemical type: Peptide, no natural source
Sequence: HITQQHRPVSDT
Assay category: BCell
Result: Negative
Reference: Sun-Lung Tsai; I-Shyan Sheen; Rong-Nan Chien; Chia-Min Chu; Hsiu-Chu Huang; Yen-Ling Chuang; Tzong-Hsien Lee; Shuen-Kuei Liao; Chen-Lung Lin; George C Kuo; Yun-Fan Liaw. "Activation of Th1 immunity is a common immune mechanism for the successful treatment of hepatitis B and C: tetramer assay and therapeutic implications." Journal of biomedical science (2003).

Epitope: Pre S2.152-161
Chemical type: Peptide from protein
Sequence: AILSKTGDPV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Pre S2.152-161
Chemical type: Peptide from protein
Sequence: AILSKTGDPV
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Core.178-187
Chemical type: Peptide from protein
Sequence: LLALLSCLTV
Position: 178-187
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: E2.398-407
Chemical type: Peptide from protein
Sequence: SLASLFTSGA
Position: 81-90
Source molecule (GenBank): AAN40570.2
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Su-Hyung Park; Se-Hwan Yang; Chang Geun Lee; Jin-Won Youn; Jun Chang; Young Chul Sung. "Efficient induction of T helper 1 CD4+ T-cell responses to hepatitis C virus core and E2 by a DNA prime-adenovirus boost." Vaccine (2003).

Epitope: E2 484-503
Chemical type: Peptide from protein
Sequence: PYCWHYAPRQCGIVPASQVC
Position: 484-503
Source molecule (GenBank): AAP74718.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: splenocyte
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: E2 574-593
Chemical type: Peptide from protein
Sequence: VGNNTLTCPTDCFRKHPEAT
Position: 574-593
Source molecule (GenBank): AAP74718.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: splenocyte
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: E2 624-643
Chemical type: Peptide from protein
Sequence: FTIFKVRMYVGGVEHRLDAA
Position: 624-643
Source molecule (GenBank): AAP74718.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: splenocyte
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: E2 654-673
Chemical type: Peptide from protein
Sequence: LEDRDRSELSPLLLSTTEWQ
Position: 654-673
Source molecule (GenBank): AAP74718.1
Assay category: TCell
Result: Negative
Host: F 
Cell type: splenocyte
Tissue: spleen
Culture conditions: Short Term Restimulated
Reference: Lihua Hou; Guixin Du; Yigang Tong; Haitao Wang. "Identification of B cell epitopes of hepatitis C virus RNA dependent RNA polymerase." Journal of virological methods (2002).

Epitope: P24
Chemical type: Peptide, no natural source
Sequence: HITQQHRPVSDT
Assay category: BCell
Result: Positive
Reference: W C Brown; T C McGuire; D Zhu; H A Lewin; J Sosnow; G H Palmer. "Highly conserved regions of the immunodominant major surface protein 2 of the genogroup II ehrlichial pathogen Anaplasma marginale are rich in naturally derived CD4+ T lymphocyte epitopes that elicit strong recall responses." Journal of immunology (Baltimore, Md. : 1950) (2001).

Epitope: MSP2 81-110
Chemical type: Peptide from protein
Sequence: FPYKRDAAGRVDFKVHNFDWSAPEPKISFK
Position: 81-110
Source molecule (GenBank): AAN08704.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: MSP2 81-110
Chemical type: Peptide from protein
Sequence: FPYKRDAAGRVDFKVHNFDWSAPEPKISFK
Position: 81-110
Source molecule (GenBank): AAN08704.1
Assay category: TCell
Result: Negative
Host: M 
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: MSP2 372-401
Chemical type: Peptide from protein
Sequence: PLSPISDYTGTAGKNKDTGIASFNFAYFGG
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: MSP2 372-401
Chemical type: Peptide from protein
Sequence: PLSPISDYTGTAGKNKDTGIASFNFAYFGG
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: A Zibert; W Kraas; H Meisel; G Jung; M Roggendorf. "Epitope mapping of antibodies directed against hypervariable region 1 in acute self-limiting and chronic infections due to hepatitis C virus." Journal of virology (1997).

Epitope: A04
Chemical type: Peptide from protein
Sequence: TRTIGGSQAQ
Position: 387-396
Source molecule (GenBank): CAB41950.1
Assay category: BCell
Result: Positive

Epitope: A04
Chemical type: Peptide from protein
Sequence: TRTIGGSQAQ
Position: 387-396
Source molecule (GenBank): CAB41950.1
Assay category: BCell
Result: Positive

Epitope: A04
Chemical type: Peptide from protein
Sequence: TRTIGGSQAQ
Position: 387-396
Source molecule (GenBank): CAB41950.1
Assay category: BCell
Result: Positive

Epitope: A10
Chemical type: Peptide from protein
Sequence: SQAQTASGLV
Assay category: BCell
Result: Positive

Epitope: A10
Chemical type: Peptide from protein
Sequence: SQAQTASGLV
Assay category: BCell
Result: Negative

Epitope: A10
Chemical type: Peptide from protein
Sequence: SQAQTASGLV
Assay category: BCell
Result: Negative

Epitope: A13
Chemical type: Peptide from protein
Sequence: QTASGLVSMF
Assay category: BCell
Result: Positive

Epitope: A13
Chemical type: Peptide from protein
Sequence: QTASGLVSMF
Assay category: BCell
Result: Positive

Epitope: A13
Chemical type: Peptide from protein
Sequence: QTASGLVSMF
Assay category: BCell
Result: Positive
Reference: Wendy A Hayman; Istvan Toth; Nicholas Flinn; Martin Scanlon; Michael F Good. "Enhancing the immunogenicity and modulating the fine epitope recognition of antisera to a helical group A streptococcal peptide vaccine candidate from the M protein using lipid-core peptide technology." Immunology and cell biology (2002).

Epitope: p161
Chemical type: Peptide from protein
Sequence: RVFPRGTVENPDKARELLNK
Position: 43-62
Source molecule (GenBank): P08089.1
Assay category: BCell
Result: Positive
Host: F 5-6 weeks

Epitope: p161
Chemical type: Peptide from protein
Sequence: RVFPRGTVENPDKARELLNK
Position: 43-62
Source molecule (GenBank): P08089.1
Assay category: BCell
Result: Positive
Host: F 5-6 weeks
Reference: Aniko Horvath; Colleen Olive; Allan Wong; Timothy Clair; Penny Yarwood; Michael Good; Istvan Toth. "Lipoamino acid-based adjuvant carrier system: enhanced immunogenicity of group a streptococcal peptide epitopes." Journal of medicinal chemistry (2002).

Epitope: J8
Chemical type: Peptide, no natural source
Sequence: QAEDKVKQSREAKKQVEKALKQLEDKVQ
Assay category: BCell
Result: Positive
Host: F 4-6 weeks
Reference: C Brinster; S Muguet; Y C Lone; D Boucreux; N Renard; A Fournillier; F Lemonnier; G Inchauspé. "Different hepatitis C virus nonstructural protein 3 (Ns3)-DNA-expressing vaccines induce in HLA-A2.1 transgenic mice stable cytotoxic T lymphocytes that target one major epitope." Hepatology (Baltimore, Md.) (2001).

Epitope: NS3 1287-1296
Chemical type: Peptide from protein
Sequence: TGSPITYSTY
Position: 1287-1296
Source molecule (GenBank): AAA45534.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NS3 1287-1296
Chemical type: Peptide from protein
Sequence: TGSPITYSTY
Position: 1287-1296
Source molecule (GenBank): AAA45534.1
Assay category: MhcBinding
Result: Negative
Reference: R A Williamson; D Peretz; C Pinilla; H Ball; R B Bastidas; R Rozenshteyn; R A Houghten; S B Prusiner; D R Burton. "Mapping the prion protein using recombinant antibodies." Journal of virology (1998).

Epitope: Epitope III
Chemical type: Peptide from protein
Sequence: YYDGRRS
Position: 224-230
Source molecule (GenBank): P04925.2
Assay category: BCell
Result: Negative

Epitope: Epitope III
Chemical type: Peptide from protein
Sequence: YYDGRRS
Position: 224-230
Source molecule (GenBank): P04925.2
Assay category: BCell
Result: Positive

Epitope: Epitope III
Chemical type: Peptide from protein
Sequence: YYDGRRS
Position: 224-230
Source molecule (GenBank): P04925.2
Assay category: BCell
Result: Positive

Epitope: Epitope III
Chemical type: Peptide from protein
Sequence: YYDGRRS
Position: 224-230
Source molecule (GenBank): P04925.2
Assay category: BCell
Result: Positive

Epitope: Epitope III
Chemical type: Peptide from protein
Sequence: YYDGRRS
Position: 224-230
Source molecule (GenBank): P04925.2
Assay category: BCell
Result: Negative

Epitope: Epitope III
Chemical type: Peptide from protein
Sequence: YYDGRRS
Position: 224-230
Source molecule (GenBank): P04925.2
Assay category: BCell
Result: Positive
Reference: G A Kouzmitcheva; V A Petrenko; G P Smith. "Identifying diagnostic peptides for lyme disease through epitope discovery." Clinical and diagnostic laboratory immunology. (2001).

Epitope: Peptide 1
Chemical type: Peptide, no natural source
Sequence: GNNSVSKEKPPSLNWP
Assay category: BCell
Result: Positive
Reference: Silvia Guglietta; Anna Rosa Garbuglia; Valentina Pacciani; Cristiano Scottà; Maria Paola Perrone; Luca Laurenti; Enea Spada; Alfonso Mele; Maria Rosaria Capobianchi; Gloria Taliani; Antonella Folgori; Alessandra Vitelli; Lionello Ruggeri; Alfredo Nicosia; Enza Piccolella; Paola Del Porto. "Positive selection of cytotoxic T lymphocyte escape variants during acute hepatitis C virus infection." European journal of immunology (2005).

Epitope: NS3 1097-1111
Chemical type: Peptide from protein
Sequence: AGVKHPALQMYTNVD
Position: 1097-1111
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1221-1235
Chemical type: Peptide from protein
Sequence: TPPAVPQSYQVGYLH
Position: 1221-1235
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1257-1271
Chemical type: Peptide from protein
Sequence: VLVLNPSVAATLGFG
Position: 1257-1271
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1281-1295
Chemical type: Peptide from protein
Sequence: DPNIRTGNRTVTTGA
Position: 1281-1295
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1297-1311
Chemical type: Peptide from protein
Sequence: LTYSTYGKFLAGGGC
Position: 1297-1311
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1321-1335
Chemical type: Peptide from protein
Sequence: CDDCHAQDATSILGI
Position: 1321-1335
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Positive
Host: M 20 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1321-1335
Chemical type: Peptide from protein
Sequence: CDDCHAQDATSILGI
Position: 1321-1335
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Positive
Host: M 20 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NS3 1497-1511
Chemical type: Peptide from protein
Sequence: TGRGRLGTYRYVTPG
Position: 1497-1511
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1617-1631
Chemical type: Peptide from protein
Sequence: TWKCLVRLKPTLHGP
Position: 1613-1627
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NS3 1621-1635
Chemical type: Peptide from protein
Sequence: KPTLHGPTPLLYRLG
Position: 1621-1635
Source molecule (GenBank): Q81495.3
Assay category: TCell
Result: Negative
Host: M 20 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: A L Erickson; Y Kimura; S Igarashi; J Eichelberger; M Houghton; J Sidney; D McKinney; A Sette; A L Hughes; C M Walker. "The outcome of hepatitis C virus infection is predicted by escape mutations in epitopes targeted by cytotoxic T lymphocytes." Immunity (2001).

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNETTL
Position: 1629-1637
Source molecule (GenBank): ABV46144.2
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS4 1629-1637 variant
Chemical type: Peptide from protein
Sequence: GAVQNETTL
Position: 1629-1637
Source molecule (GenBank): ABV46144.2
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 19.0

Epitope: NS2 1011-1021
Chemical type: Peptide from protein
Sequence: LLGPADGMVSK
Position: 1011-1021
Source molecule (GenBank): BAA01582.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS3 1446-1454
Chemical type: Peptide from protein
Sequence: GDFDSVIDC
Position: 1446-1454
Source molecule (GenBank): BAA03375.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: NS4 1963-1972 variant
Chemical type: Peptide from protein
Sequence: QWLSSECTTPC
Position: 1962-1972
Source molecule (GenBank): ACB87119.1
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: liver
Culture conditions: Cell Line / Clone