LiteFold/IEDB huggingface dataset:
Reference: Wei Li; Ronghui Li; Yang Wang; Yan Zhang; Munendra S Tomar; Shaodong Dai. "Calcitonin gene-related peptide is a potential autoantigen for CD4 T cells in type 1 diabetes." Frontiers in immunology (2022).

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: BCell
Result: Positive-Low

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Positive-High
Host: F 
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Positive-High
Host: F 
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Positive-Low
Host:  12 weeks
Cell type: T cell CD4+
Tissue: pancreas
Culture conditions: Direct Ex Vivo

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD4+
Tissue: pancreas
Culture conditions: Direct Ex Vivo

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: pancreas
Culture conditions: Direct Ex Vivo

Epitope: SG20
Chemical type: Peptide from protein
Sequence: SCNTATCVTHRLAGLLSRSG
Position: 83-102
Source molecule (GenBank): NP_001029126.1
Assay category: TCell
Result: Positive
Host: F 
Cell type: T cell CD4+
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Arun Naini; Max Peter Bartetzko; Someswara Rao Sanapala; Felix Broecker; Victoria Wirtz; Marilda P Lisboa; Sharavathi G Parameswarappa; Daniel Knopp; Jessica Przygodda; Matthias Hakelberg; Rosalind Pan; Axay Patel; Laurent Chorro; Arthur Illenberger; Christopher Ponce; Srinivas Kodali; Jacqueline Lypowy; Annaliesa S Anderson; Robert G K Donald; Arne von Bonin; Claney L Pereira. "Semisynthetic Glycoconjugate Vaccine Candidates against  O25B Induce Functional IgG Antibodies in Mice." JACS Au (2022).

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Host: F 7-9 weeks

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Host: F 7-9 weeks

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Host: F 7-9 weeks

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 30.5

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 130000.0

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0035

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 67.0

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 1020000.0

Epitope: O25B FS1 (4)
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0679
Reference: Jacquelynne Cervantes-Torres; Sergio Rosales-Mendoza; Carlos Cabello; Laura Montero; Juan Hernandez-Aceves; Guillermo Granados; Arturo Calderón-Gallegos; Francisco Zúñiga-Flores; Mirna Ruiz-Rivera; Julio César Abarca-Magaña; Sandra Ortega-Francisco; Roxana Olguin-Alor; Georgina Díaz; Filipo Paczka-Garcia; Rubí Zavala-Gaytan; Ricardo Vázquez-Ramírez; Dolores Adriana Ayón-Nuñez; Julio César Carrero; Diana Rios; Mariana Jasso-Ramírez; Rebeca Vázquez-Hernández; David Venegas; Daniel Garzón; Laura Cobos; René Segura-Velázquez; Nelly Villalobos; Gabriela Meneses; Joaquín Zúñiga; Gerardo Gamba; Graciela Cárdenas; Marisela Hernández; Michael E Parkhouse; Marta C Romano; Luis Alonso Herrera; Raúl J Bobes; Mayra Pérez-Tapia; Leonor Huerta; Nora Fierro; Isabel Gracia; Gloria Soldevilla; Gladis Fragoso; Francisco Suárez-Güemes; Juan P Laclette; Edda Sciutto. "Towards the development of an epitope-focused vaccine for SARS-CoV-2." Vaccine (2022).

Epitope: P4
Chemical type: Peptide from protein
Sequence: QAGSTPCNGV
Position: 474-483
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: P4
Chemical type: Peptide from protein
Sequence: QAGSTPCNGV
Position: 474-483
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Negative

Epitope: P4
Chemical type: Peptide from protein
Sequence: QAGSTPCNGV
Position: 474-483
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Negative
Reference: Wout de Mey; Phaedra De Schrijver; Dorien Autaers; Lena Pfitzer; Bruno Fant; Hanne Locy; Arthur Esprit; Lien Lybaert; Cedric Bogaert; Magali Verdonck; Kris Thielemans; Karine Breckpot; Lorenzo Franceschini. "A synthetic DNA template for fast manufacturing of versatile single epitope mRNA." Molecular therapy. Nucleic acids (2022).

Epitope: ATM(H448L)
Chemical type: Peptide, no natural source
Sequence: LLMILSQLLPQQRLGERTPYVLRCLTE
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Amber M Frye; Monir Ejemel; Lisa Cavacini; Yang Wang; Michael J Rudolph; Renjie Song; Nicholas J Mantis. "Agglutination of Borreliella burgdorferi by Transmission-Blocking OspA Monoclonal Antibodies and Monovalent Fab Fragments." Infection and immunity (2022).

Epitope: mAb 857-2
Chemical type: Peptide from protein
Sequence: GKTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRAD
Position: 106-141
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: mAb 857-2
Chemical type: Peptide from protein
Sequence: GKTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRAD
Position: 106-141
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: mAb 857-2
Chemical type: Peptide from protein
Sequence: GKTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRAD
Position: 106-141
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: mAb 857-2
Chemical type: Peptide from protein
Sequence: GKTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRAD
Position: 106-141
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: mAb 857-2
Chemical type: Peptide from protein
Sequence: GKTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRAD
Position: 106-141
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive
Reference: Eric Tran; Simon Turcotte; Alena Gros; Paul F Robbins; Yong-Chen Lu; Mark E Dudley; John R Wunderlich; Robert P Somerville; Katherine Hogan; Christian S Hinrichs; Maria R Parkhurst; James C Yang; Steven A Rosenberg. "Cancer immunotherapy based on mutation-specific CD4+ T cells in a patient with epithelial cancer." Science (New York, N.Y.) (2014).

Epitope: FCER1A
Chemical type: Peptide, no natural source
Sequence: FIPLLVVILFAVHTGLFISTQQQVT
Assay category: TCell
Result: Negative
MHC allele types: 408 437 317 322 69 1072
Host: F 43 years
Cell type: tumor infiltrating lymphocyte
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: FCER1A
Chemical type: Peptide, no natural source
Sequence: FIPLLVVILFAVHTGLFISTQQQVT
Assay category: TCell
Result: Negative
MHC allele types: 408 437 317 322 69 1072
Host: F 43 years
Cell type: tumor infiltrating lymphocyte
Tissue: lung
Culture conditions: Direct Ex Vivo
Reference: Swati Sharma; Ekta Nagar; Naveen Arora. "Per a 5-derived T-cell peptides modulate NF-kB signalling to ameliorate allergic inflammation systemically in murine model of cockroach allergic hyper-reactivity." Clinical and experimental immunology (2022).

Epitope: TC-P2
Chemical type: Peptide from protein
Sequence: RAILSYLADQYGKDDSLYRRDAKKRA
Position: 68-93
Source molecule (GenBank): AAX33729.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: TC-P2
Chemical type: Peptide from protein
Sequence: RAILSYLADQYGKDDSLYRRDAKKRA
Position: 68-93
Source molecule (GenBank): AAX33729.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: TC-P2
Chemical type: Peptide from protein
Sequence: RAILSYLADQYGKDDSLYRRDAKKRA
Position: 68-93
Source molecule (GenBank): AAX33729.1
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: cell found in tissue
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: TC-P2
Chemical type: Peptide from protein
Sequence: RAILSYLADQYGKDDSLYRRDAKKRA
Position: 68-93
Source molecule (GenBank): AAX33729.1
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Reference: Zachary R Fritz; Rene S Schloss; Martin L Yarmush; Lawrence J Williams. "HSymM-guided engineering of the immunodominant p53 transactivation domain putative peptide antigen for improved binding to its anti-p53 monoclonal antibody." Bioorganic & medicinal chemistry letters (2021).

Epitope: p53 45-55
Chemical type: Peptide from protein
Sequence: LSPDDIEQWFT
Position: 45-55
Source molecule (GenBank): E7EMR6.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3300.0

Epitope: p53 45-55
Chemical type: Peptide from protein
Sequence: LSPDDIEQWFT
Position: 45-55
Source molecule (GenBank): E7EMR6.1
Assay category: BCell
Result: Positive

Epitope: p53 45-55
Chemical type: Peptide from protein
Sequence: LSPDDIEQWFT
Position: 45-55
Source molecule (GenBank): E7EMR6.1
Assay category: BCell
Result: Positive
Quantitative measurement: 6.3
Reference: Michael Kilian; Mirco Friedrich; Khwab Sanghvi; Edward Green; Stefan Pusch; Daisuke Kawauchi; Martin Löwer; Jana K Sonner; Christopher Krämer; Julia Zaman; Stefanie Jung; Michael O Breckwoldt; Gerald Willimsky; Stefan B Eichmüller; Andreas von Deimling; Wolfgang Wick; Felix Sahm; Michael Platten; Lukas Bunse. "T-cell Receptor Therapy Targeting Mutant Capicua Transcriptional Repressor in Experimental Gliomas." Clinical cancer research : an official journal of the American Association for Cancer Research (2022).

Epitope: CIC R215W 15-mer 7
Chemical type: Peptide, no natural source
Sequence: FMIFSKRHWALVHQR
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Kent Thudium; Mark Selby; Julie A Zorn; Gregory Rak; Xi-Tao Wang; Roderick Todd Bunch; Jason M Hogan; Pavel Strop; Alan J Korman. "Preclinical Characterization of Relatlimab, a Human LAG-3-Blocking Antibody, Alone or in Combination with Nivolumab." Cancer immunology research (2022).

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00025

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive
Quantitative measurement: 2.4

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive
Quantitative measurement: 0.12

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive
Quantitative measurement: 2000000.0

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive

Epitope: Epitope of Relatilimab on LAG-3
Chemical type: Peptide from protein
Sequence: PHPAAPSSWGP
Position: 84-94
Source molecule (GenBank): NP_002277.4
Assay category: BCell
Result: Positive
Reference: Shasha Jiang; Fulong Nan; Shuyun Zhang; Xianjuan Zhang; Zonghui Li; Zhongjie Yu; Fengjun Liu; Jun Li; Xiaoqiong Zhou; Delei Niu; Hui Wang; Xueming Zhang; Wenxuan Liu; Xiaoli Yang; Yunyang Wang; Bin Wang. "CRM197-conjugated multi antigen dominant epitope for effective human cytomegalovirus vaccine development." International journal of biological macromolecules (2023).

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Positive-Low
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide from protein
Sequence: ASYFGENADKFFIFPNYTIVSDFGRPNAAPETHR
Position: 287-320
Source molecule (GenBank): ACL51135.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Shuyuan Zhang; Wenxv Jia; Jianwei Zeng; Mingxi Li; Ziyi Wang; Haixia Zhou; Linqi Zhang; Xinquan Wang. "Cryoelectron microscopy structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein." Frontiers in microbiology (2022).

Epitope: Epitope of MERS-S41 Fab on MERS S
Chemical type: Discontinuous protein residues
Discontinuous residues: K502, L506, D510, R511, T512, E513, W535, E536, G538, D539, Y540, Y541, R542, W553, V555, A556, S557
Source molecule (GenBank): AFS88936.1
Assay category: BCell
Result: Positive

Epitope: Epitope of MERS-S41 Fab on MERS S
Chemical type: Discontinuous protein residues
Discontinuous residues: K502, L506, D510, R511, T512, E513, W535, E536, G538, D539, Y540, Y541, R542, W553, V555, A556, S557
Source molecule (GenBank): AFS88936.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.6

Epitope: Epitope of MERS-S41 Fab on MERS S
Chemical type: Discontinuous protein residues
Discontinuous residues: K502, L506, D510, R511, T512, E513, W535, E536, G538, D539, Y540, Y541, R542, W553, V555, A556, S557
Source molecule (GenBank): AFS88936.1
Assay category: BCell
Result: Positive

Epitope: Epitope of MERS-S41 Fab on MERS S
Chemical type: Discontinuous protein residues
Discontinuous residues: K502, L506, D510, R511, T512, E513, W535, E536, G538, D539, Y540, Y541, R542, W553, V555, A556, S557
Source molecule (GenBank): AFS88936.1
Assay category: BCell
Result: Positive

Epitope: Epitope of MERS-S41 Fab on MERS S
Chemical type: Discontinuous protein residues
Discontinuous residues: K502, L506, D510, R511, T512, E513, W535, E536, G538, D539, Y540, Y541, R542, W553, V555, A556, S557
Source molecule (GenBank): AFS88936.1
Assay category: BCell
Result: Positive
Reference: Galina V Petrova; Yuri N Naumov; Elena N Naumova; Jack Gorski. "Role of cross-reactivity in cellular immune targeting of influenza A M1<sub>58-66</sub> variant peptide epitopes." Frontiers in immunology (2022).

Epitope: M1 58-66 A65
Chemical type: Peptide, no natural source
Sequence: GILGFVFAL
Assay category: TCell
Result: Positive
Host:  37-47 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Shiwen Peng; Deyin Xing; Louise Ferrall; Ya-Chea Tsai; Chien-Fu Hung; T-C Wu. "Identification of human MHC-I HPV18 E6/E7-specific CD8 + T cell epitopes and generation of an HPV18 E6/E7-expressing adenosquamous carcinoma in HLA-A2 transgenic mice." Journal of biomedical science (2022).

Epitope: HPV18 E7.14 (aa66-80)
Chemical type: Peptide from protein
Sequence: CKCEARIELVVESSA
Position: 66-80
Source molecule (GenBank): ARS43460.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HPV18 E6.12 (aa56-70)
Chemical type: Peptide from protein
Sequence: YRDSIPHAACHKCID
Position: 56-70
Source molecule (GenBank): ALA62613.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HPV18 E6.16 (aa76-90)
Chemical type: Peptide from protein
Sequence: RELRHYSDSVYGDTL
Position: 76-90
Source molecule (GenBank): ALA62613.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HPV18 E6.24 (aa116-130)
Chemical type: Peptide from protein
Sequence: EKLRHLNEKRRFHNI
Position: 116-130
Source molecule (GenBank): ALA62613.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HPV18 E6.29 (aa141-155)
Chemical type: Peptide from protein
Sequence: CCNRARQERLQRRRE
Position: 141-155
Source molecule (GenBank): P06463.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Muzamil Yaqub Want; Anna Konstorum; Ruea-Yea Huang; Vaibhav Jain; Satoko Matsueda; Takemasa Tsuji; Amit Lugade; Kunle Odunsi; Richard Koya; Sebastiano Battaglia. "Neoantigens retention in patient derived xenograft models mediates autologous T cells activation in ovarian cancer." Oncoimmunology (2019).

Epitope: PTBP3 wt
Chemical type: Peptide from protein
Sequence: EIISLGLIF
Assay category: TCell
Result: Negative
Host: F 
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Helga Westerlind; Alf Kastbom; Johan Rönnelid; Monika Hansson; Lars Alfredsson; Linda Mathsson-Alm; Guy Serre; Martin Cornillet; Rikard Holmdahl; Karl Skriner; Holger Bang; Lars Klareskog; Saedis Saevarsdottir; Karin Lundberg; Caroline Grönwall; Johan Askling. "The association between autoantibodies and risk for venous thromboembolic events among patients with rheumatoid arthritis." Rheumatology (Oxford, England) (2023).

Epitope: Cit-Vim 2-17
Chemical type: Peptide from protein
Sequence: STRSVSSSSYRRMFGG
Position: 2-17
Source molecule (GenBank): B0YJC4.1
Assay category: BCell
Result: Positive

Epitope: Cit-P.PAD (CPP3)
Chemical type: Peptide from protein
Sequence: AKTDSYWTRDYTGWFAMYD
Position: 121-139
Source molecule (GenBank): WP_023847729.1
Assay category: BCell
Result: Positive
Reference: Laura Sánchez-de Prada; Iván Sanz-Muñoz; Raúl Ortiz de Lejarazu; José María Eiros; Adolfo García-Sastre; Teresa Aydillo. "Immunodominance hierarchy after seasonal influenza vaccination." Emerging microbes & infections (2022).

Epitope: Influenza A_ Ca2 region
Chemical type: Discontinuous protein residues
Discontinuous residues: H155, A156, A158, K159, R238, D239
Source molecule (GenBank): APB91426.1
Assay category: BCell
Result: Positive
Host:  49-80.3 years

Epitope: Influenza A_ Ca2 region
Chemical type: Discontinuous protein residues
Discontinuous residues: H155, A156, A158, K159, R238, D239
Source molecule (GenBank): APB91426.1
Assay category: BCell
Result: Positive
Host:  49-55.6 years

Epitope: Influenza A_ Ca2 region
Chemical type: Discontinuous protein residues
Discontinuous residues: H155, A156, A158, K159, R238, D239
Source molecule (GenBank): APB91426.1
Assay category: BCell
Result: Positive
Host:  76.9-80.3 years
Reference: Alexander Hempelmann; Laura Hartleb; Monique van Straaten; Hamidreza Hashemi; Johan P Zeelen; Kevin Bongers; F Nina Papavasiliou; Markus Engstler; C Erec Stebbins; Nicola G Jones. "Nanobody-mediated macromolecular crowding induces membrane fission and remodeling in the African trypanosome." Cell reports (2021).

Epitope: Epitope of NB14 on VSG2
Chemical type: Discontinuous protein residues
Discontinuous residues: M100, K101, S104, E107, A108, Q111, T112, Q116, T280, T284, A285, E286, A292, A295, G296, T298, T301, E305, K312, A316, I319
Source molecule (GenBank): P26332.1
Assay category: BCell
Result: Positive

Epitope: Epitope of NB14 on VSG2
Chemical type: Discontinuous protein residues
Discontinuous residues: M100, K101, S104, E107, A108, Q111, T112, Q116, T280, T284, A285, E286, A292, A295, G296, T298, T301, E305, K312, A316, I319
Source molecule (GenBank): P26332.1
Assay category: BCell
Result: Positive
Quantitative measurement: 35.1

Epitope: Epitope of NB14 on VSG2
Chemical type: Discontinuous protein residues
Discontinuous residues: M100, K101, S104, E107, A108, Q111, T112, Q116, T280, T284, A285, E286, A292, A295, G296, T298, T301, E305, K312, A316, I319
Source molecule (GenBank): P26332.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.3

Epitope: Epitope of NB14 on VSG2
Chemical type: Discontinuous protein residues
Discontinuous residues: M100, K101, S104, E107, A108, Q111, T112, Q116, T280, T284, A285, E286, A292, A295, G296, T298, T301, E305, K312, A316, I319
Source molecule (GenBank): P26332.1
Assay category: BCell
Result: Positive
Reference: Weixuan Wang; Gan Gu; Ruya Yin; Jiajin Fu; Mingpeng Jing; Zhen Shen; Daowan Lai; Baomin Wang; Ligang Zhou. "A Nanobody-Based Immunoassay for Detection of Ustilaginoidins in Rice Samples." Toxins (2022).

Epitope: Ustilaginoidin A
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 2 years

Epitope: Ustilaginoidin A
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 2 years

Epitope: Ustilaginoidin A
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 2 years