Reference: Laia Muixí; Montserrat Carrascal; Iñaki Alvarez; Xavier Daura; Mercè Martí; Maria Pilar Armengol; Clemencia Pinilla; Joaquín Abian; Ricardo Pujol-Borrell; Dolores Jaraquemada. "Thyroglobulin peptides associate in vivo to HLA-DR in autoimmune thyroid glands." Journal of immunology (Baltimore, Md. : 1950) (2008).

Epitope: Complement C3 194-208
Chemical type: Peptide from protein
Sequence: DIPELVNMGQWKIRA
Position: 194-208
Source molecule (GenBank): P01024.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436 410

Epitope: DQB1*0602 β-chain 75-89
Chemical type: Peptide from protein
Sequence: DVGVYRAVTPQGRPD
Position: 75-89
Source molecule (GenBank): P03992.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: DQB1*0602 β-chain 75-89
Chemical type: Peptide from protein
Sequence: DVGVYRAVTPQGRPD
Position: 75-89
Source molecule (GenBank): P03992.2
Assay category: MhcBinding
Result: Positive-Low

Epitope: DQB1*0602 β-chain 75-89
Chemical type: Peptide from protein
Sequence: DVGVYRAVTPQGRPD
Position: 75-89
Source molecule (GenBank): P03992.2
Assay category: MhcBinding
Result: Negative

Epitope: Cathepsin C 170-183
Chemical type: Peptide from protein
Sequence: YDHNFVKAINAIQK
Position: 170-183
Source molecule (GenBank): P53634.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436 410

Epitope: Cofilin non-muscle isoform 8-20
Chemical type: Peptide from protein
Sequence: DGVIKVFNDMKVR
Position: 9-21
Source molecule (GenBank): P23528.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: BIP 67-85
Chemical type: Peptide from protein
Sequence: AFTPEGERLIGDAAKNQLT
Position: 67-85
Source molecule (GenBank): P11021.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: Thyroglobulin 2098-2112
Chemical type: Peptide from protein
Sequence: LSSVVVDPSIRHFDV
Position: 2098-2112
Source molecule (GenBank): P01266.5
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: Thyroglobulin 2098-2112
Chemical type: Peptide from protein
Sequence: LSSVVVDPSIRHFDV
Position: 2098-2112
Source molecule (GenBank): P01266.5
Assay category: MhcBinding
Result: Negative

Epitope: Thyroglobulin 2098-2112
Chemical type: Peptide from protein
Sequence: LSSVVVDPSIRHFDV
Position: 2098-2112
Source molecule (GenBank): P01266.5
Assay category: MhcBinding
Result: Positive

Epitope: Heparan sulfate proteoglycan 462-475
Chemical type: Peptide from protein
Sequence: GTLIIRDVKESDQG
Position: 462-475
Source molecule (GenBank): P98160.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: Hemoglobin α-chain 1-11
Chemical type: Peptide from protein
Sequence: VLSPADKTNV
Position: 2-11
Source molecule (GenBank): P69905.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: Nidogen-2 1167-1180
Chemical type: Peptide from protein
Sequence: SRAGLELGAEPETI
Position: 1167-1180
Source molecule (GenBank): Q14112.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: HLA-II, DRB3-1 β-chain 69-79
Chemical type: Peptide from protein
Sequence: FDSDVGEYRAV
Position: 69-79
Source molecule (GenBank): P79483.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 436

Epitope: Hemoglobin β-chain 1-31
Chemical type: Peptide from protein
Sequence: VHLTPEEKSAVTALWGKVNVDEVGGEALGRL
Position: 2-32
Source molecule (GenBank): P02023
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: Collagen α 1 chain XII 2137-2154
Chemical type: Peptide from protein
Sequence: DPSPSPVLGYKIVYKPVG
Position: 2137-2154
Source molecule (GenBank): Q5VYK1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: α-1 antitrypsin 189-204
Chemical type: Peptide from protein
Sequence: TQGKIVDLVKELDRDT
Position: 189-204
Source molecule (GenBank): P01009.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: hnRNP A2/B1 318-350
Chemical type: Peptide from protein
Sequence: SGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGR
Position: 318-350
Source molecule (GenBank): P22626.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: GAPDH 197-214
Chemical type: Peptide from protein
Sequence: DGRGALQNIIPASTGAAK
Position: 198-215
Source molecule (GenBank): P04406.3
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: Hemoglobin α-chain 12-40
Chemical type: Peptide from protein
Sequence: AAWGKVGAHAGEYGAEALERMFLSFPTTK
Position: 13-41
Source molecule (GenBank): P01922
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: Hemoglobin α-chain 33-56
Chemical type: Peptide from protein
Sequence: FLSFPTTKTYFPHFDLSHGSAQVK
Position: 34-57
Source molecule (GenBank): P01922
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: Thyroglobulin 2520-2532
Chemical type: Peptide from protein
Sequence: AKAVKQFEESQGR
Position: 2520-2532
Source molecule (GenBank): AAI40934.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414

Epitope: Thyroglobulin 2520-2532
Chemical type: Peptide from protein
Sequence: AKAVKQFEESQGR
Position: 2520-2532
Source molecule (GenBank): AAI40934.1
Assay category: MhcBinding
Result: Negative

Epitope: Thyroglobulin 2520-2532
Chemical type: Peptide from protein
Sequence: AKAVKQFEESQGR
Position: 2520-2532
Source molecule (GenBank): AAI40934.1
Assay category: MhcBinding
Result: Negative

Epitope: Hemoglobin α-chain 91-99
Chemical type: Peptide from protein
Sequence: LRVDPVNFK
Position: 92-100
Source molecule (GenBank): P01922
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 57 414