Reference: A R Dongre; S Kovats; P deRoos; A L McCormack; T Nakagawa; V Paharkova-Vatchkova; J Eng; H Caldwell; J R Yates; A Y Rudensky. "In vivo MHC class II presentation of cytosolic proteins revealed by rapid automated tandem mass spectrometry and functional analyses." European journal of immunology (2001).

Epitope: P7
Chemical type: Peptide from protein
Sequence: VEYHFLSPYVSPRE
Position: 684-697
Source molecule (GenBank): NP_035768.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P8
Chemical type: Peptide from protein
Sequence: VEYHFLSPYVSPRESP
Position: 684-699
Source molecule (GenBank): NP_035768.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P19
Chemical type: Peptide from protein
Sequence: DPDSRGEYSWAVAQGVKQ
Position: 562-579
Source molecule (GenBank): NP_038853.2
Assay category: MhcLigandElution
Result: Positive

Epitope: P19
Chemical type: Peptide from protein
Sequence: DPDSRGEYSWAVAQGVKQ
Position: 562-579
Source molecule (GenBank): NP_038853.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 64000.0

Epitope: P21
Chemical type: Peptide from protein
Sequence: GENPIYKSAVTTVVNPK
Position: 778-794
Source molecule (GenBank): CAA33272.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P21
Chemical type: Peptide from protein
Sequence: GENPIYKSAVTTVVNPK
Position: 778-794
Source molecule (GenBank): CAA33272.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 5000.0

Epitope: P62
Chemical type: Peptide from protein
Sequence: TQFHPPHIEIQ
Position: 48-58
Source molecule (GenBank): P01887.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: P62
Chemical type: Peptide from protein
Sequence: TQFHPPHIEIQ
Position: 48-58
Source molecule (GenBank): P01887.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P82
Chemical type: Peptide from protein
Sequence: TPSPESPDQWSSSSPHSASDW
Position: 474-494
Source molecule (GenBank): AAH59256.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P83
Chemical type: Peptide from protein
Sequence: DGELTYENVQVSPVPG
Position: 34-49
Source molecule (GenBank): NP_001103792.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P87
Chemical type: Peptide from protein
Sequence: DGELTYENVQVSPVPGGPPG
Position: 34-53
Source molecule (GenBank): NP_001103792.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P88
Chemical type: Peptide from protein
Sequence: EDGELTYENVQVSPVPGGPPG
Position: 33-53
Source molecule (GenBank): NP_001103792.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P94
Chemical type: Peptide from protein
Sequence: ISKQEYDESGPSIVHR
Position: 357-372
Source molecule (GenBank): NP_033739.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P99
Chemical type: Peptide from protein
Sequence: NLDYVATSIHEAVTK
Position: 397-411
Source molecule (GenBank): CAA30275.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P107
Chemical type: Peptide from protein
Sequence: AFRVPTPNVSVVD
Position: 230-242
Source molecule (GenBank): AAH92267.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P115
Chemical type: Peptide from protein
Sequence: APMYYRGAQAAIVVYD
Position: 74-89
Source molecule (GenBank): AAH27378.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: P115
Chemical type: Peptide from protein
Sequence: APMYYRGAQAAIVVYD
Position: 74-89
Source molecule (GenBank): AAH27378.1
Assay category: MhcLigandElution
Result: Positive

Epitope: P115
Chemical type: Peptide from protein
Sequence: APMYYRGAQAAIVVYD
Position: 74-89
Source molecule (GenBank): AAH27378.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 3000.0

Epitope: P124
Chemical type: Peptide from protein
Sequence: DLRAQIAGYLYGVSLQITL
Assay category: MhcLigandElution
Result: Positive

Epitope: P124
Chemical type: Peptide from protein
Sequence: DLRAQIAGYLYGVSLQITL
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 410000.0