LiteFold/IEDB huggingface dataset:
Reference: Dhruv K Sethi; David A Schubert; Anne-Kathrin Anders; Annie Heroux; Daniel A Bonsor; Chantz P Thomas; Eric J Sundberg; Jason Pyrdol; Kai W Wucherpfennig. "A highly tilted binding mode by a self-reactive T cell receptor results in altered engagement of peptide and MHC." The Journal of experimental medicine (2011).

Epitope: P-4
Chemical type: Peptide, no natural source
Sequence: ANPVVHFFKNIVTPR
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: ENPVAHFFKNIVTPR
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: P9
Chemical type: Peptide, no natural source
Sequence: ENPVVHFFKNIVAPR
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: P10
Chemical type: Peptide, no natural source
Sequence: ENPVVHFFKNIVTAR
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: H6M
Chemical type: Peptide, no natural source
Sequence: ENPVVMFFKNIVTPR
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: H6R
Chemical type: Peptide, no natural source
Sequence: ENPVVRFFKNIVTPR
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Thierry Mallevaey; Andrew J Clarke; James P Scott-Browne; Mary H Young; Laila C Roisman; Daniel G Pellicci; Onisha Patel; Julian P Vivian; Jennifer L Matsuda; James McCluskey; Dale I Godfrey; Philippa Marrack; Jamie Rossjohn; Laurent Gapin. "A molecular basis for NKT cell recognition of CD1d-self-antigen." Immunity (2011).

Epitope: ß-galactcosylceramide
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: isoglobotrihexosylceramide (iGb3)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: phosphatidylserine
Chemical type: Lipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: Gb4
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive-Low
Cell type: NKT cells
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: lysophosphatidylserine
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: lymphoid
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Peter J R Ebert; Shan Jiang; Jianming Xie; Qi-Jing Li; Mark M Davis. "An endogenous positively selecting peptide enhances mature T cell responses and becomes an autoantigen in the absence of microRNA miR-181a." Nature immunology (2009).

Epitope: αTryp peptide
Chemical type: Peptide from protein
Sequence: YDRNTKSPLFVGKV
Position: 397-410
Source molecule (GenBank): P34955.1
Assay category: TCell
Result: Positive-Low
Cell type: thymocyte
Tissue: thymus
Culture conditions: Direct Ex Vivo
Reference: A Cavani; C J Hackett; K J Wilson; J B Rothbard; S I Katz. "Characterization of epitopes recognized by hapten-specific CD4+ T cells." Journal of immunology (Baltimore, Md. : 1950) (1995).

Epitope: TNP-K4-poly A-5Y-6R
Chemical type: Peptide, no natural source
Sequence: AAAKYRAAAAAAA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: TNP-K4-poly A-5Y-6R
Chemical type: Peptide, no natural source
Sequence: AAAKYRAAAAAAA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: TNP-K4-poly A-5Y-6R
Chemical type: Peptide, no natural source
Sequence: AAAKYRAAAAAAA
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 25000.0

Epitope: TNP-K4-poly A-5Y-6R
Chemical type: Peptide, no natural source
Sequence: AAAKYRAAAAAAA
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 48.0
Reference: C A Nelson; R W Roof; D W McCourt; E R Unanue. "Identification of the naturally processed form of hen egg white lysozyme bound to the murine major histocompatibility complex class II molecule I-Ak." Proceedings of the National Academy of Sciences of the United States of America (1992).

Epitope: I-Ak beta chain 165-179
Chemical type: Peptide from protein
Sequence: TPRRGEVYTCHVEHP
Position: 190-204
Source molecule (GenBank): P06343.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Peptide 1
Chemical type: Peptide, no natural source
Sequence: YEDYGILQINSR
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Sudhakar Reddy Kalluri; Veit Rothhammer; Ori Staszewski; Rajneesh Srivastava; Franziska Petermann; Marco Prinz; Bernhard Hemmer; Thomas Korn. "Functional characterization of aquaporin-4 specific T cells: towards a model for neuromyelitis optica." PloS one (2011).

Epitope: Peptide 9 (AQP4 25-39)
Chemical type: Peptide from protein
Sequence: AFKGVWTQAFWKAVT
Position: 25-39
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 30 (AQP4 88-102)
Chemical type: Peptide from protein
Sequence: FGHISGGHINPAVTV
Position: 88-102
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 40 (AQP4 118-132)
Chemical type: Peptide from protein
Sequence: YIAAQCLGAIIGAGI
Position: 118-132
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 47 (AQP4 139-153)
Chemical type: Peptide from protein
Sequence: PSVVGGLGVTMVHGN
Position: 139-153
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 58 (AQP4 172-186)
Chemical type: Peptide from protein
Sequence: FTIFASCDSKRTDVT
Position: 172-186
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 62 (AQP4 184-198)
Chemical type: Peptide from protein
Sequence: DVTGSIALAIGFSVA
Position: 184-198
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 63 (AQP4 187-201)
Chemical type: Peptide from protein
Sequence: GSIALAIGFSVAIGH
Position: 187-201
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 75 (AQP4 223-237)
Chemical type: Peptide from protein
Sequence: IMGNWENHWIYWVGP
Position: 223-237
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 98 (AQP4 292-306)
Chemical type: Peptide from protein
Sequence: LILKPGVVHVIDVDR
Position: 292-306
Source molecule (GenBank): BAD96404.1
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Peptide 100 (AQP4 298-312)
Chemical type: Peptide from protein
Sequence: VVHVIDVDRGEEKKG
Position: 298-312
Source molecule (GenBank): P55087.2
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: lymphocyte
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: N C Chowdhury; D V Saborio; M Garrovillo; A Chandraker; C C Magee; A M Waaga; M H Sayegh; M X Jin; S F Oluwole. "Comparative studies of specific acquired systemic tolerance induced by intrathymic inoculation of a single synthetic Wistar-Furth (RT1U) allo-MHC class I (RT1.AU) peptide or WAG (RT1U)-derived class I peptide." Transplantation (1998).

Epitope: RT1.Au (40-60) Peptide u-3
Chemical type: Peptide from protein
Sequence: AENPRYEPRARWMEREGPEYW
Position: 40-60
Source molecule (GenBank): CAA73907.1
Assay category: TCell
Result: Negative
Host:  8-10 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: M Bonvalet; E Wambre; H Moussu; S Horiot; W W Kwok; A Louise; D Ebo; C Hoarau; L Van Overtvelt; V Baron-Bodo; P Moingeon. "Comparison between major histocompatibility complex class II tetramer staining and surface expression of activation markers for the detection of allergen-specific CD4⁺ T cells." Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology (2011).

Epitope: Der p 1 (16-30)
Chemical type: Peptide from protein
Sequence: LRQMRTVTPIRMQGG
Position: 96-110
Source molecule (GenBank): CAQ68250.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Smitha Nair; Neetu Kukreja; Bhanu Pratap Singh; Naveen Arora. "Identification of B cell epitopes of alcohol dehydrogenase allergen of Curvularia lunata." PloS one (2011).

Epitope: ADH residues 276-293
Chemical type: Peptide from protein
Sequence: PAGAYLKAPVFETVIKMI
Position: 276-293
Source molecule (GenBank): ABC88428.1
Assay category: BCell
Result: Positive-Low

Epitope: ADH residues 289-307
Chemical type: Peptide from protein
Sequence: VIKMIRIQGSYVGNRKDSS
Position: 289-307
Source molecule (GenBank): ABC88428.1
Assay category: BCell
Result: Positive-Low
Reference: Jun Nojima; Rika Ishii-Katsuno; Eugene Futai; Noboru Sasagawa; Yuichiro Watanabe; Taiji Yoshida; Shoichi Ishiura. "Production of anti-amyloid β antibodies in mice fed rice expressing amyloid β." Bioscience, biotechnology, and biochemistry (2011).

Epitope: A beta (1-16)
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQK
Position: 672-687
Source molecule (GenBank): P05067.3
Assay category: BCell
Result: Positive
Host:  6 weeks
Reference: Tamanna Mustafiz; Erik Portelius; Mikael K Gustavsson; Mikko Hölttä; Henrik Zetterberg; Kaj Blennow; Agneta Nordberg; Christina Unger Lithner. "Characterization of the brain β-amyloid isoform pattern at different ages of Tg2576 mice." Neuro-degenerative diseases (2011).

Epitope: A beta 1-16
Chemical type: Peptide from protein
Sequence: DAEFRHDSGYEVHHQK
Position: 672-687
Source molecule (GenBank): P05067.3
Assay category: BCell
Result: Positive
Reference: Lionel Larbanoix; Carmen Burtea; Emilie Ansciaux; Sophie Laurent; Isabelle Mahieu; Luce Vander Elst; Robert N Muller. "Design and evaluation of a 6-mer amyloid-beta protein derived phage display library for molecular targeting of amyloid plaques in Alzheimer's disease: Comparison with two cyclic heptapeptides derived from a randomized phage display library." Peptides (2011).

Epitope: Aβ 17-24
Chemical type: Peptide from protein
Sequence: LVFFAEDV
Position: 688-695
Source molecule (GenBank): P05067.3
Assay category: BCell
Result: Positive
Reference: Xiaoli Yu; Don Gilden; Laura Schambers; Olga Barmina; Mark Burgoon; Jeffrey Bennett; Greg Owens. "Peptide reactivity between multiple sclerosis (MS) CSF IgG and recombinant antibodies generated from clonally expanded plasma cells in MS CSF." Journal of neuroimmunology (2011).

Epitope: 02-19 #25-D3
Chemical type: Peptide, no natural source
Sequence: SCNYHHTYLTCW
Assay category: BCell
Result: Positive

Epitope: 03-7 #10-B10
Chemical type: Peptide, no natural source
Sequence: NYPSWLHAYRLA
Assay category: BCell
Result: Positive

Epitope: 04-2 #33-G9
Chemical type: Peptide, no natural source
Sequence: SVSVGMKPSPRP
Assay category: BCell
Result: Positive

Epitope: 02-19 #25-D5
Chemical type: Peptide, no natural source
Sequence: SCNYHGRTLTCW
Assay category: BCell
Result: Positive
Reference: Xiaomin Zhang; Xinjun Ren; Guangda Li; Chunna Jiao; Lei Zhang; Shaozhen Zhao; Jiantao Wang; Zhong Chao Han; Xiaorong Li. "Mesenchymal stem cells ameliorate experimental autoimmune uveoretinitis by comprehensive modulation of systemic autoimmunity." Investigative ophthalmology & visual science (2011).

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: IRBP 1169-1191
Chemical type: Peptide from protein
Sequence: PTARSVGAADGSSWEGVGVVPDV
Position: 1191-1213
Source molecule (GenBank): NP_776589.1
Assay category: TCell
Result: Positive
Host: M 6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: E I Kampylafka; J G Routsias; H Alexopoulos; M C Dalakas; H M Moutsopoulos; A G Tzioufas. "Fine specificity of antibodies against AQP4: epitope mapping reveals intracellular epitopes." Journal of autoimmunity (2011).

Epitope: AQPpep3
Chemical type: Peptide from protein
Sequence: NWGGTEKPLPVDM
Position: 58-70
Source molecule (GenBank): P55087.2
Assay category: BCell
Result: Negative

Epitope: AQPpep3
Chemical type: Peptide from protein
Sequence: NWGGTEKPLPVDM
Position: 58-70
Source molecule (GenBank): P55087.2
Assay category: BCell
Result: Negative

Epitope: AQPpep10
Chemical type: Peptide from protein
Sequence: RSQVETDDLILKPGVVHVIDVDRG
Position: 284-307
Source molecule (GenBank): P55087.2
Assay category: BCell
Result: Negative

Epitope: AQPpep10
Chemical type: Peptide from protein
Sequence: RSQVETDDLILKPGVVHVIDVDRG
Position: 284-307
Source molecule (GenBank): P55087.2
Assay category: BCell
Result: Negative
Reference: H Benjamin Larman; Zhenming Zhao; Uri Laserson; Mamie Z Li; Alberto Ciccia; M Angelica Martinez Gakidis; George M Church; Santosh Kesari; Emily M Leproust; Nicole L Solimini; Stephen J Elledge. "Autoantigen discovery with a synthetic human peptidome." Nature biotechnology (2011).

Epitope: TRIM9 (320-355)
Chemical type: Peptide from protein
Sequence: CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISH
Position: 320-355
Source molecule (GenBank): NP_443210.1
Assay category: BCell
Result: Positive
Host: F 63 years

Epitope: LOC26080-2
Chemical type: Peptide from protein
Sequence: FHGIDNEDAVQGIANWDVVQGIANWDTVHSFADGVA
Assay category: BCell
Result: Positive
Host: F 63 years

Epitope: LOC26080-4
Chemical type: Peptide from protein
Sequence: DAVHGIANKDAAQGIANWDAVQDIANEDGFHGIDNE
Assay category: BCell
Result: Positive
Host: F 63 years

Epitope: LOC26080-5
Chemical type: Peptide from protein
Sequence: QGIADGDAVHGIADEEAAQGIANWDAVQDINNEDGF
Assay category: BCell
Result: Positive
Host: F 63 years
Reference: S Borchers; S Luther; U Lips; N Hahn; J Kontsendorn; M Stadler; S Buchholz; H Diedrich; M Eder; U Koehl; A Ganser; E Mischak-Weissinger. "Tetramer monitoring to assess risk factors for recurrent cytomegalovirus reactivation and reconstitution of antiviral immunity post allogeneic hematopoietic stem cell transplantation." Transplant infectious disease : an official journal of the Transplantation Society (2011).

Epitope: pp50 243-255
Chemical type: Peptide from protein
Sequence: VTEHDTLLY
Position: 245-253
Source molecule (GenBank): AAO73452.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: pp65 123-131
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): P06725.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Maarten L Zandvliet; Ellis van Liempt; Inge Jedema; Simone Kruithof; Michel G D Kester; Henk-Jan Guchelaar; J H Frederik Falkenburg; Pauline Meij. "Simultaneous isolation of CD8(+) and CD4(+) T cells specific for multiple viruses for broad antiviral immune reconstitution after allogeneic stem cell transplantation." Journal of immunotherapy (Hagerstown, Md. : 1997) (2011).

Epitope: EBV-BZLF1-EPL
Chemical type: Peptide from protein
Sequence: EPLPQGQLTAY
Position: 54-64
Source molecule (GenBank): AAA66529.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBV-BZLF1-EPL
Chemical type: Peptide from protein
Sequence: EPLPQGQLTAY
Position: 54-64
Source molecule (GenBank): AAA66529.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CMV-pp65-IPS
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 113-121
Source molecule (GenBank): AAA45994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Ryan J Blackler; Sven Müller-Loennies; Cory L Brooks; Dylan W Evans; Lore Brade; Paul Kosma; Helmut Brade; Stephen V Evans. "A common NH53K mutation in the combining site of antibodies raised against chlamydial LPS glycoconjugates significantly increases avidity." Biochemistry (2011).

Epitope: Kdo
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Quantitative measurement: 1.8

Epitope: Kdo
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: Ko
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Quantitative measurement: 2.4

Epitope: Ko
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Reference: Matthias A Oberli; Marie-Lyn Hecht; Pascal Bindschädler; Alexander Adibekian; Thomas Adam; Peter H Seeberger. "A possible oligosaccharide-conjugate vaccine candidate for Clostridium difficile is antigenic and immunogenic." Chemistry & biology (2011).

Epitope: D-Galactose
Chemical type: Carbohydrate
Assay category: BCell
Result: Negative
Host: F
Reference: Diana Diaz-Arevalo; Karine Bagramyan; Teresa B Hong; James I Ito; Markus Kalkum. "CD4+ T cells mediate the protective effect of the recombinant Asp f3-based anti-aspergillosis vaccine." Infection and immunity (2011).

Epitope: Asp f3 P1
Chemical type: Peptide from protein
Sequence: VFSYIPWSEDKGEITACGIP
Position: 15-34
Source molecule (GenBank): AAB95638.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: Asp f3 P1
Chemical type: Peptide from protein
Sequence: VFSYIPWSEDKGEITACGIP
Position: 15-34
Source molecule (GenBank): AAB95638.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Asp f3 P2
Chemical type: Peptide from protein
Sequence: ACGIPINYNASKEWADKKVI
Position: 30-49
Source molecule (GenBank): AAB95638.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: Asp f3 P2
Chemical type: Peptide from protein
Sequence: ACGIPINYNASKEWADKKVI
Position: 30-49
Source molecule (GenBank): AAB95638.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Rebecca C Robey; Salvinia Mletzko; Mark Bower; Rhonda Meys; Marta Boffito; Mark Nelson; Christopher B Bunker; Frances M Gotch. "Ex-vivo recognition of late-lytic CD8 epitopes specific for Kaposi's sarcoma-associated herpesvirus (KSHV) by HIV/KSHV-coinfected individuals." Viral immunology (2011).

Epitope: ORF28 Peptide 9
Chemical type: Peptide from protein
Sequence: VTGGMVDGS
Position: 9-17
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 22
Chemical type: Peptide from protein
Sequence: MATKPPVIG
Position: 22-30
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 32
Chemical type: Peptide from protein
Sequence: ITVLFLLVI
Position: 32-40
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 33
Chemical type: Peptide from protein
Sequence: TVLFLLVIG
Position: 33-41
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 68
Chemical type: Peptide from protein
Sequence: AYQVLRTLG
Position: 68-76
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 73
Chemical type: Peptide from protein
Sequence: RTLGPQAGS
Position: 73-81
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 78
Chemical type: Peptide from protein
Sequence: QAGSHAPPT
Position: 78-86
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 84
Chemical type: Peptide from protein
Sequence: PPTVGIATQ
Position: 84-92
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative

Epitope: ORF28 Peptide 85
Chemical type: Peptide from protein
Sequence: PTVGIATQE
Position: 85-93
Source molecule (GenBank): YP_001129381.1
Assay category: MhcBinding
Result: Negative
Reference: Marianne Ruhl; Torben Knuschke; Kevin Schewior; Lejla Glavinic; Christoph Neumann-Haefelin; Dae-In Chang; Marina Klein; Falko M Heinemann; Hannelore Tenckhoff; Manfred Wiese; Peter A Horn; Sergei Viazov; Ulrich Spengler; Michael Roggendorf; Norbert Scherbaum; Jacob Nattermann; Daniel Hoffmann; Jörg Timm. "CD8+ T-cell response promotes evolution of hepatitis C virus nonstructural proteins." Gastroenterology (2011).

Epitope: NS5B 2836–2845
Chemical type: Peptide from protein
Sequence: APTLWARMVL
Position: 2835-2844
Source molecule (GenBank): CAB41951.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo