LiteFold/IEDB huggingface dataset:
Reference: Lucie Jelínková; Yevel Flores-Garcia; Sarah Shapiro; Bryce T Roberts; Nikolai Petrovsky; Fidel Zavala; Bryce Chackerian. "A vaccine targeting the L9 epitope of the malaria circumsporozoite protein confers protection from blood-stage infection in a mouse challenge model." NPJ vaccines (2022).

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks

Epitope: L9 epitope
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive
Host:  7-8 weeks
Reference: Shawn M Costello; Sophie R Shoemaker; Helen T Hobbs; Annalee W Nguyen; Ching-Lin Hsieh; Jennifer A Maynard; Jason S McLellan; John E Pak; Susan Marqusee. "The SARS-CoV-2 spike reversibly samples an open-trimer conformation exposing novel epitopes." Nature structural & molecular biology (2022).

Epitope: S 978-1001
Chemical type: Peptide from protein
Sequence: NDILSRLDKVEAEVQIDRLITGRL
Position: 978-1001
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Reference: Philip A Mudd; Anastasia A Minervina; Mikhail V Pogorelyy; Jackson S Turner; Wooseob Kim; Elizaveta Kalaidina; Jan Petersen; Aaron J Schmitz; Tingting Lei; Alem Haile; Allison M Kirk; Robert C Mettelman; Jeremy Chase Crawford; Thi H O Nguyen; Louise C Rowntree; Elisa Rosati; Katherine A Richards; Andrea J Sant; Michael K Klebert; Teresa Suessen; William D Middleton; Joshua Wolf; Sharlene A Teefey; Jane A O'Halloran; Rachel M Presti; Katherine Kedzierska; Jamie Rossjohn; Paul G Thomas; Ali H Ellebedy. "SARS-CoV-2 mRNA vaccination elicits a robust and persistent T follicular helper cell response in humans." Cell (2022).

Epitope: CoV-2 167-180 mut
Chemical type: Peptide from protein
Sequence: CTFEYVSQPFFMDLE
Position: 166-180
Source molecule (GenBank): UKS94522.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered
Reference: Yoshihiro Kaku; Akiko Okutani; Akira Noguchi; Satoshi Inoue; Ken Maeda; Shigeru Morikawa. "Epitope Mapping of A Viral Propagation-Inhibiting Single-Chain Variable Fragment Against Rabies Lyssavirus Phosphoprotein." Monoclonal antibodies in immunodiagnosis and immunotherapy (2022).

Epitope: RABV-P 47-52
Chemical type: Peptide from protein
Sequence: DNLPED
Position: 47-52
Source molecule (GenBank): AAZ07892.1
Assay category: BCell
Result: Positive

Epitope: RABV-P 47-52
Chemical type: Peptide from protein
Sequence: DNLPED
Position: 47-52
Source molecule (GenBank): AAZ07892.1
Assay category: BCell
Result: Positive

Epitope: RABV-P 47-52
Chemical type: Peptide from protein
Sequence: DNLPED
Position: 47-52
Source molecule (GenBank): AAZ07892.1
Assay category: BCell
Result: Positive

Epitope: RABV-P 47-52
Chemical type: Peptide from protein
Sequence: DNLPED
Position: 47-52
Source molecule (GenBank): AAZ07892.1
Assay category: BCell
Result: Positive
Reference: Michael J Moore; Maggie Zhong; Johanna Hansen; Hans Gartner; Craig Grant; Mei Huang; Faith M Harris; Naxin Tu; Natalie A Bowerman; Kurt H Edelmann; Thomas Barry; Olivier Herbin; Chin-Siean Tay; David J DiLillo; Corinne E Decker; Natasha Levenkova; James Shevchuk; Ankur Dhanik; Karoline A Meagher; Amanda Karr; Jan Roos; Wen-Yi Lee; David Suh; Mark Eckersdorff; T Craig Meagher; Matthew Koss; Lakeisha Esau; Matthew A Sleeman; Robert Babb; Gang Chen; Christos A Kyratsous; William T Poueymirou; John R McWhirter; Vera A Voronina; Chunguang Guo; Cagan Gurer; George D Yancopoulos; Andrew J Murphy; Lynn E Macdonald. "Humanization of T cell-mediated immunity in mice." Science immunology (2021).

Epitope: LCMV GPC (447-455)
Chemical type: Peptide from protein
Sequence: YLVSIFLHL
Position: 447-455
Source molecule (GenBank): P09991.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV GPC (447-455)
Chemical type: Peptide from protein
Sequence: YLVSIFLHL
Position: 447-455
Source molecule (GenBank): P09991.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV ZP (49-59)
Chemical type: Peptide from protein
Sequence: YLCRHCLNLL
Position: 49-58
Source molecule (GenBank): P18541.3
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV ZP (49-59)
Chemical type: Peptide from protein
Sequence: YLCRHCLNLL
Position: 49-58
Source molecule (GenBank): P18541.3
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: LCMV GP33
Chemical type: Peptide from protein
Sequence: KAVYNFATCGI
Position: 33-43
Source molecule (GenBank): P09991.1
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: MAGE-A3 (271-279)
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43357.1
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: David Gate; Emma Tapp; Olivia Leventhal; Marian Shahid; Tim J Nonninger; Andrew C Yang; Katharina Strempfl; Michael S Unger; Tobias Fehlmann; Hamilton Oh; Divya Channappa; Victor W Henderson; Andreas Keller; Ludwig Aigner; Douglas R Galasko; Mark M Davis; Kathleen L Poston; Tony Wyss-Coray. "CD4<sup>+</sup> T cells contribute to neurodegeneration in Lewy body dementia." Science (New York, N.Y.) (2021).

Epitope: α-synuclein  32-46p
Chemical type: Peptide from protein
Sequence: KTKEGVLYVGSKTKE
Position: 32-46
Source molecule (GenBank): P37840.1
Assay category: TCell
Result: Positive-Low
Host:  63-68 years
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: S Momsen Reincke; Meng Yuan; Hans-Christian Kornau; Victor M Corman; Scott van Hoof; Elisa Sánchez-Sendin; Melanie Ramberger; Wenli Yu; Yuanzi Hua; Henry Tien; Marie Luisa Schmidt; Tatjana Schwarz; Lara Maria Jeworowski; Sarah E Brandl; Helle Foverskov Rasmussen; Marie A Homeyer; Laura Stöffler; Martin Barner; Désirée Kunkel; Shufan Huo; Johannes Horler; Niels von Wardenburg; Inge Kroidl; Tabea M Eser; Andreas Wieser; Christof Geldmacher; Michael Hoelscher; Hannes Gänzer; Günter Weiss; Dietmar Schmitz; Christian Drosten; Harald Prüss; Ian A Wilson; Jakob Kreye. "SARS-CoV-2 Beta variant infection elicits potent lineage-specific and cross-reactive antibodies." Science (New York, N.Y.) (2022).

Epitope: Epitope of COVA1-16 Fab on SARS-CoV-2 Beta RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: Y366, S368, A369, F374, K375, C376, Y377, G378, V379, S380, P381, T382, R405, Q406, P409, G410, Q411, T412, G413, D424, D425, F426
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.88
Host: M 47 years
Reference: George Elias; Pieter Meysman; Esther Bartholomeus; Nicolas De Neuter; Nina Keersmaekers; Arvid Suls; Hilde Jansens; Aisha Souquette; Hans De Reu; Marie-Paule Emonds; Evelien Smits; Eva Lion; Paul G Thomas; Geert Mortier; Pierre Van Damme; Philippe Beutels; Kris Laukens; Viggo Van Tendeloo; Benson Ogunjimi. "Preexisting memory CD4 T cells in naïve individuals confer robust immunity upon hepatitis B vaccination." eLife (2022).

Epitope: HBsAg 14
Chemical type: Peptide from protein
Sequence: SQSPTSNHSPTSCPP
Position: 227-241
Source molecule (GenBank): P31868.2
Assay category: TCell
Result: Positive
Host:  21-50 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HBsAg 20
Chemical type: Peptide from protein
Sequence: LRRFIIFLFILLLCL
Position: 251-265
Source molecule (GenBank): P31868.2
Assay category: TCell
Result: Positive
Host:  21-50 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HBsAg 41
Chemical type: Peptide from protein
Sequence: YLWEWASVRFSWLSL
Position: 335-349
Source molecule (GenBank): Q4R1R8.1
Assay category: TCell
Result: Positive
Host:  21-50 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HBsAg 54
Chemical type: Peptide from protein
Sequence: IPLLPIFFCLWVYI
Position: 387-400
Source molecule (GenBank): Q4R1R8.1
Assay category: TCell
Result: Positive
Host:  21-50 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Allison J Greaney; Tyler N Starr; Rachel T Eguia; Andrea N Loes; Khadija Khan; Farina Karim; Sandile Cele; John E Bowen; Jennifer K Logue; Davide Corti; David Veesler; Helen Y Chu; Alex Sigal; Jesse D Bloom. "A SARS-CoV-2 variant elicits an antibody response with a shifted immunodominance hierarchy." PLoS pathogens (2022).

Epitope: SARS-CoV2-RBD-I358
Chemical type: Discontinuous protein residues
Discontinuous residues: I355
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-N388
Chemical type: Discontinuous protein residues
Discontinuous residues: N385
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-V395
Chemical type: Discontinuous protein residues
Discontinuous residues: V392
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-I402
Chemical type: Discontinuous protein residues
Discontinuous residues: I399
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-R408
Chemical type: Discontinuous protein residues
Discontinuous residues: R405
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-I418
Chemical type: Discontinuous protein residues
Discontinuous residues: I415
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-L452
Chemical type: Discontinuous protein residues
Discontinuous residues: L449
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2-RBD-L452
Chemical type: Discontinuous protein residues
Discontinuous residues: L449
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2-RBD-L452
Chemical type: Discontinuous protein residues
Discontinuous residues: L449
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Positive

Epitope: SARS-CoV2-RBD-E465
Chemical type: Discontinuous protein residues
Discontinuous residues: E462
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-P499
Chemical type: Discontinuous protein residues
Discontinuous residues: P496
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Positive-Low

Epitope: SARS-CoV2-RBD-P507
Chemical type: Discontinuous protein residues
Discontinuous residues: P504
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2-RBD-F515
Chemical type: Discontinuous protein residues
Discontinuous residues: F512
Source molecule (GenBank): QWW93436.1
Assay category: BCell
Result: Negative
Reference: Stéphane Hazebrouck; Sarita U Patil; Blanche Guillon; Nicole Lahood; Stephen C Dreskin; Karine Adel-Patient; Hervé Bernard. "Immunodominant conformational and linear IgE epitopes lie in a single segment of Ara h 2." The Journal of allergy and clinical immunology (2022).

Epitope: Ara h 6 Segment 2
Chemical type: Peptide from protein
Sequence: MGEQEQYDSYDIRSTRSSDQQQRCCDELDQMENTE
Position: 56-90
Source molecule (GenBank): XP_025614701.1
Assay category: BCell
Result: Positive

Epitope: Ara h 6 Segment 2
Chemical type: Peptide from protein
Sequence: MGEQEQYDSYDIRSTRSSDQQQRCCDELDQMENTE
Position: 56-90
Source molecule (GenBank): XP_025614701.1
Assay category: BCell
Result: Positive
Host:  2-23 years

Epitope: Ara h 6 Segment 2
Chemical type: Peptide from protein
Sequence: MGEQEQYDSYDIRSTRSSDQQQRCCDELDQMENTE
Position: 56-90
Source molecule (GenBank): XP_025614701.1
Assay category: BCell
Result: Positive
Reference: Gabriel Goncalves; Kerry A Mullan; Divya Duscharla; Rochelle Ayala; Nathan P Croft; Pouya Faridi; Anthony W Purcell. "IFNγ Modulates the Immunopeptidome of Triple Negative Breast Cancer Cells by Enhancing and Diversifying Antigen Processing and Presentation." Frontiers in immunology (2021).

Epitope: Eluted Peptide 92892
Chemical type: Peptide from protein
Sequence: IREADIDGDGQVN
Position: 126-138
Source molecule (GenBank): P0DP24.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92897
Chemical type: Peptide from protein
Sequence: LGDIATDYHKQSHG
Position: 79-92
Source molecule (GenBank): P31151.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92901
Chemical type: Peptide from protein
Sequence: LGHPDTLNQGEFKE
Position: 26-39
Source molecule (GenBank): P06702.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92914
Chemical type: Peptide from protein
Sequence: VFEKKDKNEDKKIDF
Position: 58-72
Source molecule (GenBank): P31151.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92933
Chemical type: Peptide from protein
Sequence: LKKENKNEKVIEHIMED
Position: 49-65
Source molecule (GenBank): P06702.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92947
Chemical type: Peptide from protein
Sequence: EVQDGKVISSREQVHQTTR
Position: 414-432
Source molecule (GenBank): Q04695.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92950
Chemical type: Peptide from protein
Sequence: ILVIKMGVAAHKKSHEESH
Position: 73-91
Source molecule (GenBank): P05109.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92959
Chemical type: Peptide from protein
Sequence: ILVIKMGVAAHKKSHEESHKE
Position: 73-93
Source molecule (GenBank): P05109.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92960
Chemical type: Peptide from protein
Sequence: HTDINTPLTTTSGNLHGQPVS
Position: 126-146
Source molecule (GenBank): P05089.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932

Epitope: Eluted Peptide 92970
Chemical type: Peptide from protein
Sequence: YASSPGGVYATRSSAVRLRSSVPGVRLL
Position: 53-80
Source molecule (GenBank): P08670.4
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 590 29 691 306 932
Reference: Xueyin Wang; Mark L Sandberg; Aaron D Martin; Kathleen R Negri; Grant B Gabrelow; Daniel P Nampe; Ming-Lun Wu; Michele E McElvain; Dora Toledo Warshaviak; Wen-Hua Lee; Julyun Oh; Mark E Daris; Falene Chai; Christine Yao; James Furney; Craig Pigott; Alexander Kamb; Han Xu. "Potent, Selective CARs as Potential T-Cell Therapeutics for HPV-positive Cancers." Journal of immunotherapy (Hagerstown, Md. : 1997) (2021).

Epitope: HPV E6 101-109
Chemical type: Peptide from protein
Sequence: YNKPLCDLL
Position: 99-107
Source molecule (GenBank): P03126
Assay category: MhcBinding
Result: Positive

Epitope: HPV E7 7-15
Chemical type: Peptide from protein
Sequence: TLHEYMLDL
Position: 7-15
Source molecule (GenBank): P03129
Assay category: BCell
Result: Positive

Epitope: HPV E7 7-15
Chemical type: Peptide from protein
Sequence: TLHEYMLDL
Position: 7-15
Source molecule (GenBank): P03129
Assay category: MhcBinding
Result: Positive

Epitope: HPV E7 78-87
Chemical type: Peptide from protein
Sequence: TLEDLLMGTL
Position: 78-87
Source molecule (GenBank): P03129
Assay category: MhcBinding
Result: Positive

Epitope: PTPRD 1604-1613
Chemical type: Peptide from protein
Sequence: FIHDALLEAV
Position: 1604-1613
Source molecule (GenBank): NP_002830.1
Assay category: BCell
Result: Positive
Reference: Eline Gall; Florian Stieglitz; Andreas Pich; Georg Martin Norbert Behrens; Joachim Kuhn; Rainer Blasczyk; Funmilola Josephine Haukamp; Christina Bade-Döding. "Proteomic Profiling and T Cell Receptor Usage of Abacavir Susceptible Subjects." Biomedicines (2022).

Epitope: Abacavir
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Abacavir
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive
Reference: Oranit Likhit; Worawit Louthrenoo; Sa-Nga Pattanakitsakul; Aroonroong Suttitheptumrong; Supot Hannongbua; Thanyada Rungrotmongkol; Hiroshi Noguchi; Fujio Takeuchi; Kobporn Boonnak. "Determination of T Cell Responses in Thai Systemic Sclerosis Patients." Journal of immunology research (2022).

Epitope: SPep1
Chemical type: Peptide from protein
Sequence: NCSKDAKVPSPP
Position: 385-396
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep1
Chemical type: Peptide from protein
Sequence: NCSKDAKVPSPP
Position: 385-396
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep1
Chemical type: Peptide from protein
Sequence: NCSKDAKVPSPP
Position: 385-396
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep1
Chemical type: Peptide from protein
Sequence: NCSKDAKVPSPP
Position: 385-396
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep5
Chemical type: Peptide from protein
Sequence: PIEKIYNKTQREKFA
Position: 739-753
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep5
Chemical type: Peptide from protein
Sequence: PIEKIYNKTQREKFA
Position: 739-753
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep5
Chemical type: Peptide from protein
Sequence: PIEKIYNKTQREKFA
Position: 739-753
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SPep5
Chemical type: Peptide from protein
Sequence: PIEKIYNKTQREKFA
Position: 739-753
Source molecule (GenBank): P11387.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Ilaria Fanelli; Paolo Rovero; Paul Robert Hansen; Jette Lautrup Frederiksen; Gunnar Houen; Nicole Hartwig Trier. "Reactivity of Rheumatoid Arthritis-Associated Citrulline-Dependent Antibodies to Epstein-Barr Virus Nuclear Antigen1-3." Antibodies (Basel, Switzerland) (2022).

Epitope: EBNA2-B
Chemical type: Peptide from protein
Sequence: GQSRGRGRGRGRGRGKGKSR
Position: 342-361
Source molecule (GenBank): 82503202
Assay category: BCell
Result: Positive

Epitope: EBNA2-B
Chemical type: Peptide from protein
Sequence: GQSRGRGRGRGRGRGKGKSR
Position: 342-361
Source molecule (GenBank): 82503202
Assay category: BCell
Result: Positive-Low

Epitope: EBNA3-D
Chemical type: Peptide from protein
Sequence: EDAHLEPSQRGKKRKRVDDD
Position: 51-70
Source molecule (GenBank): QCF55718.1
Assay category: BCell
Result: Negative

Epitope: EBNA3-D
Chemical type: Peptide from protein
Sequence: EDAHLEPSQRGKKRKRVDDD
Position: 51-70
Source molecule (GenBank): QCF55718.1
Assay category: BCell
Result: Positive-Low
Reference: Tao Dao; Sungsoo Mun; Tatyana Korontsvit; Abdul G Khan; Mary Ann Pohl; Thomas White; Martin G Klatt; David Andrew; Ivo C Lorenz; David A Scheinberg. "A TCR mimic monoclonal antibody for the HPV-16 E7-epitope p11-19/HLA-A*02:01 complex." PloS one (2022).

Epitope: HPV-E7AAAA
Chemical type: Peptide, no natural source
Sequence: YMAAAAPET
Assay category: MhcBinding
Result: Positive

Epitope: A-3
Chemical type: Peptide, no natural source
Sequence: YMADLQPET
Assay category: MhcBinding
Result: Positive
Reference: Guan-Chun Lai; Tai-Ling Chao; Shiau-Yu Lin; Han-Chieh Kao; Ya-Min Tsai; De-Chao Lu; Yi-Wei Chiang; Sui-Yuan Chang; Shih-Chung Chang. "Neutralization or enhancement of SARS-CoV-2 infection by a monoclonal antibody targeting a specific epitope in the spike receptor-binding domain." Antiviral research (2022).

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive

Epitope: CoV-2 S 1Ba-3H epitope
Chemical type: Peptide from protein
Sequence: STPCNGVEGFNCYFPLQSYG
Position: 486-505
Source molecule (GenBank): BCN86353.1
Assay category: BCell
Result: Positive