Reference: Anusha Nathan; Elizabeth J Rossin; Clarety Kaseke; Ryan J Park; Ashok Khatri; Dylan Koundakjian; Jonathan M Urbach; Nishant K Singh; Arman Bashirova; Rhoda Tano-Menka; Fernando Senjobe; Michael T Waring; Alicja Piechocka-Trocha; Wilfredo F Garcia-Beltran; A John Iafrate; Vivek Naranbhai; Mary Carrington; Bruce D Walker; Gaurav D Gaiha. "Structure-guided T cell vaccine design for SARS-CoV-2 variants and sarbecoviruses." Cell (2021).

Epitope: CoV-2 ORF1ab 6533-6542
Chemical type: Peptide from protein
Sequence: AANTVIWDYK
Position: 6532-6541
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 3392-3399
Chemical type: Peptide from protein
Sequence: AMRPNFTI
Position: 3392-3399
Source molecule (GenBank): P0DTC1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 1727-1735
Chemical type: Peptide from protein
Sequence: DVRETMSYL
Position: 1727-1735
Source molecule (GenBank): P0DTC1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 membrane 112-120
Chemical type: Peptide from protein
Sequence: FNPETNILL
Position: 112-120
Source molecule (GenBank): P0DTC5.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 spike 318-327
Chemical type: Peptide from protein
Sequence: FRVQPTESIV
Position: 318-327
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 1723-1731
Chemical type: Peptide from protein
Sequence: GELGDVRET
Position: 1723-1731
Source molecule (GenBank): P0DTC1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 4928-4936
Chemical type: Peptide from protein
Sequence: IPTITQMNL
Position: 4928-4936
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 4928-4936
Chemical type: Peptide from protein
Sequence: IPTITQMNL
Position: 4928-4936
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF1ab 4928-4936
Chemical type: Peptide from protein
Sequence: IPTITQMNL
Position: 4928-4936
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF3a 158-167
Chemical type: Peptide from protein
Sequence: IPYNSVTSSI
Position: 158-167
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF3a 158-167
Chemical type: Peptide from protein
Sequence: IPYNSVTSSI
Position: 158-167
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF3a 158-167
Chemical type: Peptide from protein
Sequence: IPYNSVTSSI
Position: 158-167
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 membrane 149-156
Chemical type: Peptide from protein
Sequence: LRIAGHHL
Position: 149-156
Source molecule (GenBank): P0DTC5.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF3a 140-149
Chemical type: Peptide from protein
Sequence: LYDANYFLCW
Position: 140-149
Source molecule (GenBank): P0DTC3.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 spike 969-977
Chemical type: Peptide from protein
Sequence: NFGAISSVL
Position: 969-977
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 nucleocapsid 78-87
Chemical type: Peptide from protein
Sequence: NSSPDDQIGY
Position: 77-86
Source molecule (GenBank): P0DTC9.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF1ab 6841-6851
Chemical type: Peptide from protein
Sequence: NVAKYTQLCQY
Position: 6841-6851
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 spike 321-329
Chemical type: Peptide from protein
Sequence: QPTESIVRF
Position: 321-329
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 spike 321-329
Chemical type: Peptide from protein
Sequence: QPTESIVRF
Position: 321-329
Source molecule (GenBank): P0DTC2.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF1ab 6885-6893
Chemical type: Peptide from protein
Sequence: RQWLPTGTL
Position: 6884-6892
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 6885-6893
Chemical type: Peptide from protein
Sequence: RQWLPTGTL
Position: 6884-6892
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF1ab 6885-6893
Chemical type: Peptide from protein
Sequence: RQWLPTGTL
Position: 6884-6892
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 6885-6893
Chemical type: Peptide from protein
Sequence: RQWLPTGTL
Position: 6884-6892
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF1ab 6885-6893
Chemical type: Peptide from protein
Sequence: RQWLPTGTL
Position: 6884-6892
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: CoV-2 ORF1ab 6885-6893
Chemical type: Peptide from protein
Sequence: RQWLPTGTL
Position: 6884-6892
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative

Epitope: CoV-2 ORF1ab 6541-6549
Chemical type: Peptide from protein
Sequence: YKRDAPAHI
Position: 6540-6548
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative