LiteFold/IEDB huggingface dataset:
Reference: Yan Li Zhang; Yun Yan Li; Ben Peng Zhao; Chun Xiu Yuan; Jian Mei Yang; Jiao Jiao Lin; Xin Gang Feng. "Molecular characterization and identification of Th1 epitopes of a Schistosoma japonicum protein similar to prosaposin." Parasitology research (2014).

Epitope: P (490-504)
Chemical type: Peptide from protein
Sequence: DELKHLIKNACSILP
Position: 490-504
Source molecule (GenBank): AAW27625.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P (490-504)
Chemical type: Peptide from protein
Sequence: DELKHLIKNACSILP
Position: 490-504
Source molecule (GenBank): AAW27625.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P (490-504)
Chemical type: Peptide from protein
Sequence: DELKHLIKNACSILP
Position: 490-504
Source molecule (GenBank): AAW27625.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P (630-644)
Chemical type: Peptide from protein
Sequence: KNFLNLFSISTMTRG
Position: 630-644
Source molecule (GenBank): AAW27625.1
Assay category: TCell
Result: Positive-Low
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P (630-644)
Chemical type: Peptide from protein
Sequence: KNFLNLFSISTMTRG
Position: 630-644
Source molecule (GenBank): AAW27625.1
Assay category: TCell
Result: Positive-Low
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P (630-644)
Chemical type: Peptide from protein
Sequence: KNFLNLFSISTMTRG
Position: 630-644
Source molecule (GenBank): AAW27625.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Hanna-Mari Koskimaa; Anna E Paaso; Marij J P Welters; Seija E Grénman; Kari J Syrjänen; Sjoerd H van der Burg; Stina M Syrjänen. "Human papillomavirus 16 E2-, E6- and E7-specific T-cell responses in children and their mothers who developed incident cervical intraepithelial neoplasia during a 14-year follow-up of the Finnish Family HPV cohort." Journal of translational medicine (2014).

Epitope: E6.5 (73-104)
Chemical type: Peptide from protein
Sequence: CLKFYSKISEYRHYCYSVYGTTLEQQYNKPLC
Position: 73-104
Source molecule (GenBank): AAD33252.1
Assay category: TCell
Result: Negative
Host: F mean: 37.0 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: E6.9  (127-158)
Chemical type: Peptide from protein
Sequence: DKKQRFHNIRGRWTGRCMSCCRSSRTRRETQL
Position: 127-158
Source molecule (GenBank): AAD33252.1
Assay category: TCell
Result: Negative
Host: F mean: 37.0 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Margaret Anne J Gidney; Joyce S Plested; Suzanne Lacelle; Philip A Coull; J Claire Wright; Katherine Makepeace; Jean-Robert Brisson; Andrew D Cox; E Richard Moxon; James C Richards. "Development, characterization, and functional activity of a panel of specific monoclonal antibodies to inner core lipopolysaccharide epitopes in Neisseria meningitidis." Infection and immunity (2004).

Epitope: inner core structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: inner core structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: inner core structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: inner core structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: inner core structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low
Host: F 6-8 weeks

Epitope: inner core structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Daniel S McDermott; Cory J Knudson; Steven M Varga. "Determining the breadth of the respiratory syncytial virus-specific T cell response." Journal of virology (2014).

Epitope: M2-1 (166-180)
Chemical type: Peptide from protein
Sequence: DIHKSITINNPKEST
Position: 166-180
Source molecule (GenBank): P04545.1
Assay category: TCell
Result: Positive
Host: F 6 and 8 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: L (1681-1695)
Chemical type: Peptide from protein
Sequence: SDNTHLLTKHIRIAN
Position: 1681-1695
Source molecule (GenBank): P28887.1
Assay category: TCell
Result: Positive
Host: F 6 and 8 weeks
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo
Reference: Stephen J Till; Eleanor J Raynsford; Catherine J Reynolds; Kathryn J Quigley; Agnieszka Grzybowska-Kowalczyk; Lavina R Saggar; Andrea Goldstone; Bernard Maillere; William W Kwok; Daniel M Altmann; Stephen R Durham; Rosemary J Boyton. "Peptide-induced immune regulation by a promiscuous and immunodominant CD4T-cell epitope of Timothy grass pollen: a role of Cbl-b and Itch in regulation." Thorax (2014).

Epitope: Phl p 5b p22
Chemical type: Peptide from protein
Sequence: NKAIKESTGGAYDTYKCIPS
Position: 189-208
Source molecule (GenBank): Q40963.2
Assay category: TCell
Result: Negative
Host: M 29-49 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Phl p 5b p25
Chemical type: Peptide from protein
Sequence: VKQAYAATVAAAPQVKYAVF
Position: 213-232
Source molecule (GenBank): Q40963.2
Assay category: TCell
Result: Negative
Host: M 29-49 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Lindsay S Hall; Andrew M Hall; Wendy Pickford; Mark A Vickers; Stanislaw J Urbaniak; Robert N Barker. "Combination peptide immunotherapy suppresses antibody and helper T-cell responses to the RhD protein in HLA-transgenic mice." Haematologica (2014).

Epitope: RhD28 (177-191) M4
Chemical type: Peptide, no natural source
Sequence: AYFGLSVAWSLPKPLKK
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: RhD28 (177-191) M4
Chemical type: Peptide, no natural source
Sequence: AYFGLSVAWSLPKPLKK
Assay category: TCell
Result: Positive
Host: F 24-46
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: RhD28 (177-191) M5
Chemical type: Peptide, no natural source
Sequence: AYFGLSVAWCLPKPLKKK
Assay category: TCell
Result: Positive
Host: F 24-46
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Kristoffer Brännström; Malin Lindhagen-Persson; Anna L Gharibyan; Irina Iakovleva; Monika Vestling; Mikael E Sellin; Thomas Brännström; Ludmilla Morozova-Roche; Lars Forsgren; Anders Olofsson. "A generic method for design of oligomer-specific antibodies." PloS one (2014).

Epitope: alpha Syn 131-140
Chemical type: Peptide from protein
Sequence: EGYQDYEPEA
Position: 131-140
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Positive
Host: F 8-10 weeks

Epitope: alpha Syn 131-140
Chemical type: Peptide from protein
Sequence: EGYQDYEPEA
Position: 131-140
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.05
Host: F 8-10 weeks

Epitope: alpha Syn 131-140
Chemical type: Peptide from protein
Sequence: EGYQDYEPEA
Position: 131-140
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.0
Host: F 8-10 weeks

Epitope: alpha Syn 131-140
Chemical type: Peptide from protein
Sequence: EGYQDYEPEA
Position: 131-140
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2000.0
Host: F 8-10 weeks

Epitope: alpha Syn 1-15
Chemical type: Peptide from protein
Sequence: MDVFMKGLSKAKEGV
Position: 1-15
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.7
Host: F 8-10 weeks

Epitope: alpha Syn 1-15
Chemical type: Peptide from protein
Sequence: MDVFMKGLSKAKEGV
Position: 1-15
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00016
Host: F 8-10 weeks
Reference: Olesia Lisova; Laurent Belkadi; Hugues Bedouelle. "Direct and indirect interactions in the recognition between a cross-neutralizing antibody and the four serotypes of dengue virus." Journal of molecular recognition : JMR (2014).

Epitope: mAb 4E11 epitope Den4
Chemical type: Discontinuous protein residues
Discontinuous residues: K305, F306, S307, I308, D309, K310, E311, M312, K323, K325, E327, T361, N362, S363, V364, N366, L387, T388, L389, H390
Source molecule (GenBank): ABD17411.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.117

Epitope: mAb 4E11 epitope Den4
Chemical type: Discontinuous protein residues
Discontinuous residues: K305, F306, S307, I308, D309, K310, E311, M312, K323, K325, E327, T361, N362, S363, V364, N366, L387, T388, L389, H390
Source molecule (GenBank): ABD17411.1
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 4123.0
Reference: Ratna B Gurung; Douglas J Begg; Auriol C Purdie; Richard J Whittington. "Antigenicity in sheep of synthetic peptides derived from stress-regulated Mycobacterium avium subsp. paratuberculosis proteins and comparison with recombinant protein and complex native antigens." Veterinary immunology and immunopathology (2014).

Epitope: MAP1168c<sup>219</sup>
Chemical type: Peptide from protein
Sequence: LSDDVEGARAAAAQQLSFYETIPSYRNVIAREGLSNAVE
Position: 219-257
Source molecule (GenBank): NP_960102.1
Assay category: BCell
Result: Positive

Epitope: MAP1168c<sup>219</sup>
Chemical type: Peptide from protein
Sequence: LSDDVEGARAAAAQQLSFYETIPSYRNVIAREGLSNAVE
Position: 219-257
Source molecule (GenBank): NP_960102.1
Assay category: BCell
Result: Positive-High
Reference: Liguo Liu; Wei-jia Zhang; Jianhua Zheng; Hua Fu; Qi Chen; Zongde Zhang; Xinchun Chen; Boping Zhou; Lu Feng; Haiying Liu; Qi Jin. "Exploration of novel cellular and serological antigen biomarkers in the ORFeome of Mycobacterium tuberculosis." Molecular & cellular proteomics : MCP (2014).

Epitope: P1–11
Chemical type: Peptide from protein
Sequence: PTLPSIDFGDLGEDSGASGER
Position: 171-191
Source molecule (GenBank): NP_216532.1
Assay category: TCell
Result: Negative
Host:  24-76 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P2–4
Chemical type: Peptide from protein
Sequence: GFITQLGRNFQVIYEQANAHGQKVQ
Position: 52-76
Source molecule (GenBank): NP_215714.1
Assay category: TCell
Result: Negative
Host:  24-76 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P2–5
Chemical type: Peptide from protein
Sequence: NAHGQKVQAAGNNMAQTDSAVGSSWA
Position: 69-94
Source molecule (GenBank): NP_215714.1
Assay category: TCell
Result: Negative
Host:  24-76 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Miguel Parra; Daniel Herrera; J Mauricio Calvo-Calle; Lawrence J Stern; Carlos A Parra-López; Eugene Butcher; Manuel Franco; Juana Angel. "Circulating human rotavirus specific CD4 T cells identified with a class II tetramer express the intestinal homing receptors α4β7 and CCR9." Virology (2014).

Epitope: VP6-7a
Chemical type: Peptide from protein
Sequence: LFQLMRPPNMT
Position: 291-301
Source molecule (GenBank): BAA84965.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 800.0

Epitope: VP6-7a
Chemical type: Peptide from protein
Sequence: LFQLMRPPNMT
Position: 291-301
Source molecule (GenBank): BAA84965.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.0
Reference: Zhuo Zhao; Bin Li; He-Qiang Sun; Jin-Yong Zhang; Yi-Lin Wang; Li Chen; Jian Hu; Ya-Fei He; Hao Zeng; Quan-Ming Zou; Chao Wu. "Fine-mapping of immunodominant linear B-cell epitopes of the Staphylococcus aureus SEB antigen using short overlapping peptides." PloS one (2014).

Epitope: SEB (121-138)
Chemical type: Peptide from protein
Sequence: NDGRLIEKTCMYGGVTEH
Position: 121-138
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: SEB (163-180)
Chemical type: Peptide from protein
Sequence: ERNSLSFDIPTNKKNITA
Position: 163-180
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: SEB (169-186)
Chemical type: Peptide from protein
Sequence: FDIPTNKKNITAQEIDYK
Position: 169-186
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: SEB (193-210)
Chemical type: Peptide from protein
Sequence: KHKNLYEFNSSPYETGYI
Position: 193-210
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: SEB (205-222)
Chemical type: Peptide from protein
Sequence: YETGYIKFIEGNGHSFWY
Position: 205-222
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks

Epitope: SEB (205-222)
Chemical type: Peptide from protein
Sequence: YETGYIKFIEGNGHSFWY
Position: 205-222
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: SEB (205-222)
Chemical type: Peptide from protein
Sequence: YETGYIKFIEGNGHSFWY
Position: 205-222
Source molecule (GenBank): YP_041292.1
Assay category: BCell
Result: Positive-High
Host: F 6-8 weeks
Reference: Rajesh Singh; Pranav Gupta; Praveen K Sharma; Edwin W Ades; Susan K Hollingshead; Shailesh Singh; James W Lillard. "Prediction and characterization of helper T-cell epitopes from pneumococcal surface adhesin A." Immunology (2014).

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Negative
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: 7
Chemical type: Peptide from protein
Sequence: HEYEPLPEDVKKTSE
Position: 67-81
Source molecule (GenBank): P0A4G3.1
Assay category: TCell
Result: Positive
Host: F 8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Sandra McCutcheon; Jan P M Langeveld; Boon Chin Tan; Andrew C Gill; Christopher de Wolf; Stuart Martin; Lorenzo Gonzalez; James Alibhai; A Richard Alejo Blanco; Lauren Campbell; Nora Hunter; E Fiona Houston. "Prion protein-specific antibodies that detect multiple TSE agents with high sensitivity." PloS one (2014).

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M

Epitope: OvPrP 144-154
Chemical type: Peptide from protein
Sequence: FGNDYEDRYYR
Position: 144-154
Source molecule (GenBank): P23907.1
Assay category: BCell
Result: Positive
Host: M
Reference: Shuang Geng; Yang Yu; Youmin Kang; George Pavlakis; Huali Jin; Jinyao Li; Yanxin Hu; Weibin Hu; Shuang Wang; Bin Wang. "Efficient induction of CD25- iTreg by co-immunization requires strongly antigenic epitopes for T cells." BMC immunology (2011).

Epitope: FSA1 P66
Chemical type: Peptide from protein
Sequence: QEKEKCMKFCKKVCK
Position: 66-80
Source molecule (GenBank): Q94424.3
Assay category: TCell
Result: Negative

Epitope: FSA1 P66
Chemical type: Peptide from protein
Sequence: QEKEKCMKFCKKVCK
Position: 66-80
Source molecule (GenBank): Q94424.3
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: FSA1 P66
Chemical type: Peptide from protein
Sequence: QEKEKCMKFCKKVCK
Position: 66-80
Source molecule (GenBank): Q94424.3
Assay category: TCell
Result: Positive-Intermediate
Reference: R Tohn; H Blumenfeld; S M M Haeryfar; N Veerapen; G S Besra; S A Porcelli; T L Delovitch. "Stimulation of a shorter duration in the state of anergy by an invariant natural killer T cell agonist enhances its efficiency of protection from type 1 diabetes." Clinical and experimental immunology (2011).

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: NKT cells
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: NKT cells
Tissue: spleen
Culture conditions: In Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: NKT cells
Tissue: spleen
Culture conditions: In Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: NKT cells
Tissue: spleen
Culture conditions: In Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: α-GalCer (C20:2)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Host: F 4-6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: W Yang; E L Beaudoin; L Lu; R A Du Pasquier; M J Kuroda; R A Willemsen; I J Koralnik; R P Junghans. "Chimeric immune receptors (CIRs) specific to JC virus for immunotherapy in progressive multifocal leukoencephalopathy (PML)." International immunology (2007).

Epitope: JC VP1 (100-108)
Chemical type: Peptide from protein
Sequence: ILMWEAVTL
Position: 100-108
Source molecule (GenBank): BAB68863.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Other / Unknown

Epitope: JC VP1 (100-108)
Chemical type: Peptide from protein
Sequence: ILMWEAVTL
Position: 100-108
Source molecule (GenBank): BAB68863.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: JC VP1 (100-108)
Chemical type: Peptide from protein
Sequence: ILMWEAVTL
Position: 100-108
Source molecule (GenBank): BAB68863.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: embryo
Culture conditions: Cell Line / Clone
Reference: Junbao Yang; Andrés Jaramillo; Ruili Shi; William W Kwok; T Mohanakumar. "In vivo biotinylation of the major histocompatibility complex (MHC) class II/peptide complex by coexpression of BirA enzyme for the generation of MHC class II/tetramers." Human immunology (2004).

Epitope: HA(306-318)
Chemical type: Peptide from protein
Sequence: PRYVKQNTLKLAT
Position: 306-318
Source molecule (GenBank): ABH00994.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Gerald P Morris; Geoffrey L Uy; David Donermeyer; John F Dipersio; Paul M Allen. "Dual receptor T cells mediate pathologic alloreactivity in patients with acute graft-versus-host disease." Science translational medicine (2013).

Epitope: HA 137-145
Chemical type: Peptide from protein
Sequence: VLHDDLLEA
Position: 137-145
Source molecule (GenBank): AAH65223.1
Assay category: TCell
Result: Positive
Host:  25-57 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Nathalie Escande-Beillard; Lorraine Washburn; Dan Zekzer; Zhongqi-Phyllis Wu; Shoshy Eitan; Sonja Ivkovic; Yuxin Lu; Hoa Dang; Blake Middleton; Tina V Bilousova; Yoshitaka Yoshimura; Christopher J Evans; Sebastian Joyce; Jide Tian; Daniel L Kaufman. "Neurons preferentially respond to self-MHC class I allele products regardless of peptide presented." Journal of immunology (Baltimore, Md. : 1950) (2010).

Epitope: H13a
Chemical type: Peptide from protein
Sequence: SSVVGVWYL
Position: 169-177
Source molecule (GenBank): Q9D8V0.1
Assay category: TCell
Result: Positive
Host:  embryo
Cell type: T cell CD8+
Tissue: eye
Culture conditions: Direct Ex Vivo