LiteFold/IEDB huggingface dataset:
Reference: Michael Hecker; Brit Fitzner; Isis Ludwig-Portugall; Friederike Bohne; Edmar Heyland; Juliane Klehmet; Matthias Grothe; Matthias Schwab; Alexander Winkelmann; Stefanie Meister; Ales Dudesek; Hannah Wurm; Ilya Ayzenberg; Ingo Kleiter; Corinna Trebst; Martin W Hümmert; Bernhard Neumann; Klaus Eulitz; Dirk Koczan; Uwe K Zettl. "Apheresis for the treatment of relapses in MS and NMOSD: reduced antibody reactivities, gene expression changes and potential clinical response indicators." Frontiers in immunology (2025).

Epitope: PGAM1
Chemical type: Peptide from protein
Sequence: QALRDAGYEFDICFT
Position: 43-57
Source molecule (GenBank): P18669.2
Assay category: BCell
Result: Positive-Low
Reference: Darwin W Kwok; Nicholas O Stevers; Iñaki Etxeberria; Takahide Nejo; Maggie Colton Cove; Lee H Chen; Jangham Jung; Kaori Okada; Senthilnath Lakshmanachetty; Marco Gallus; Abhilash Barpanda; Chibo Hong; Gary K L Chan; Jerry Liu; Samuel H Wu; Emilio Ramos; Akane Yamamichi; Payal B Watchmaker; Hirokazu Ogino; Atsuro Saijo; Aidan Du; Nadia R Grishanina; James Woo; Aaron Diaz; Shawn L Hervey-Jumper; Susan M Chang; Joanna J Phillips; Arun P Wiita; Christopher A Klebanoff; Joseph F Costello; Hideho Okada. "Tumour-wide RNA splicing aberrations generate actionable public neoantigens." Nature (2025).

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: NEJ-RPL22
Chemical type: Peptide, no natural source
Sequence: GIMDAANFFL
Assay category: MhcLigandElution
Result: Positive
Reference: Luis Gabriel González-Lodeiro; Patricia Barrios Roque; Nivaldo Gómez Hernández; Danya Medina-Carrasco; Lisandra E García de Castro; Vivian Huerta Galindo. "Differential Serotype Specificity in the IgG Subclass Profile of the Anti-Domain III Response Elicited by Dengue Virus Infection." Journal of medical virology (2025).

Epitope: DVIII E IgG1
Chemical type: Discontinuous protein residues
Discontinuous residues: D290, K291, G304, S305, K307, L308, K310, E314, T315, E327, D330, P332, I357, G374, V379
Source molecule (GenBank): AAN32775.1
Assay category: BCell
Result: Positive

Epitope: DVIII E IgG2 primary
Chemical type: Discontinuous protein residues
Discontinuous residues: L321, F373, G374, E375
Source molecule (GenBank): AAN32775.1
Assay category: BCell
Result: Positive

Epitope: DVIII E IgG3 primary
Chemical type: Discontinuous protein residues
Discontinuous residues: D290, L294, G304, L321, Q323, G344, V345
Source molecule (GenBank): AAN32775.1
Assay category: BCell
Result: Positive
Reference: Mariusz Skwarczynski; Nedaa Alharbi; Ummey J Nahar; Ahmed O Shalash; Armira Azuar; Prashamsa Koirala; Shefali J Khisty; Jingwen Wang; Nirmal Marasini; Waleed M Hussein; Zeinab G Khalil; Istvan Toth. "Influence of component structural arrangement on cholesterol-antigen conjugate immunogenicity and antisera bactericidal activity against group A Streptococcus." Bioorganic chemistry (2025).

Epitope: J8
Chemical type: Peptide, no natural source
Sequence: QAEDKVKQSREAKKQVEKALKQLEDKVQ
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: J8
Chemical type: Peptide, no natural source
Sequence: QAEDKVKQSREAKKQVEKALKQLEDKVQ
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Maarten E Emmelot; Rogier Bodewes; Cyril Maissan; Martijn Vos; Rik L de Swart; Cécile A C M van Els; Patricia Kaaijk. "Impact of genotypic variability of measles virus T-cell epitopes on vaccine-induced T-cell immunity." NPJ vaccines (2025).

Epitope: N25-39
Chemical type: Peptide from protein
Sequence: GGAIRGIKHIIIVPI
Position: 25-39
Source molecule (GenBank): 5441806
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: N25-39
Chemical type: Peptide from protein
Sequence: GGAIRGIKHIIIVPI
Position: 25-39
Source molecule (GenBank): 5441806
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: N29-43
Chemical type: Peptide from protein
Sequence: RGIKHIIIVPIPGDS
Position: 29-43
Source molecule (GenBank): 5441806
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M320-334
Chemical type: Peptide from protein
Sequence: YDDVIINDDQGLFKV
Position: 320-334
Source molecule (GenBank): 3297998
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: L1394-1408
Chemical type: Peptide from protein
Sequence: TNPLIYDNAPLIDRD
Position: 1394-1408
Source molecule (GenBank): 1644271
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Sung-Wook Hong; Peter D Krueger; Kevin C Osum; Thamotharampillai Dileepan; Adam Herman; Daniel L Mueller; Marc K Jenkins. "Immune tolerance of food is mediated by layers of CD4<sup>+</sup> T cell dysfunction." Nature (2022).

Epitope: Glp
Chemical type: Peptide from protein
Sequence: CNVYIPPYCTIAP
Position: 253-265
Source molecule (GenBank): Q9M4M5.1
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 2W
Chemical type: Peptide from protein
Sequence: EAWGALANWAVDSA
Position: 2-15
Source molecule (GenBank): QDK65286.1
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: 2W
Chemical type: Peptide from protein
Sequence: EAWGALANWAVDSA
Position: 2-15
Source molecule (GenBank): QDK65286.1
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Reference: Yingze Zhao; Wenling Xiao; Yanan Wu; Wenhui Fan; Lei Li; Can Yue; Qingxu Zhang; Danni Zhang; Xiaoju Yuan; Sijia Yao; Sai Liu; Min Li; Pengyan Wang; Hangjie Zhang; Jie Zhang; Min Zhao; Xiaoqun Zheng; Wenjun Liu; George F Gao; William J Liu. "Parallel T Cell Immunogenic Regions in Influenza B and A Viruses with Distinct Nuclear Export Signal Functions: The Balance between Viral Life Cycle and Immune Escape." Journal of immunology (Baltimore, Md. : 1950) (2023).

Epitope: BM 55-70 IK16
Chemical type: Peptide from protein
Sequence: IQKALIGASICFLKPK
Position: 55-70
Source molecule (GenBank): P03489.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BM 55-70 IK16
Chemical type: Peptide from protein
Sequence: IQKALIGASICFLKPK
Position: 55-70
Source molecule (GenBank): P03489.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BM 55-70 IK16
Chemical type: Peptide from protein
Sequence: IQKALIGASICFLKPK
Position: 55-70
Source molecule (GenBank): P03489.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BM 55-70 IK16
Chemical type: Peptide from protein
Sequence: IQKALIGASICFLKPK
Position: 55-70
Source molecule (GenBank): P03489.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BM 55-65 IC11
Chemical type: Peptide from protein
Sequence: IQKALIGASIC
Position: 55-65
Source molecule (GenBank): P03489.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Carmen Noelker; Florian Seitz; Annekathrin Sturn; Frauke Neff; Luminita-Cornelia Andrei-Selmer; Lorenz Rau; Armin Geyer; J Alexander Ross; Michael Bacher; Richard Dodel. "Autoantibodies against α-synuclein inhibit its aggregation and cytotoxicity." Journal of autoimmunity (2025).

Epitope: alpha-Syn P4
Chemical type: Peptide from protein
Sequence: AEKTKQGVAE
Position: 19-28
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Negative

Epitope: alpha-Syn P5
Chemical type: Peptide from protein
Sequence: GVAEAAGKTK
Position: 25-34
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Negative

Epitope: alpha-Syn P7
Chemical type: Peptide from protein
Sequence: VLYVGSKTKE
Position: 37-46
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Negative

Epitope: alpha-Syn P15
Chemical type: Peptide from protein
Sequence: AGSIAAATGF
Position: 85-94
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Negative

Epitope: alpha-Syn 96-140
Chemical type: Peptide from protein
Sequence: KKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
Position: 96-140
Source molecule (GenBank): P37840.1
Assay category: BCell
Result: Negative
Reference: Dan Qin; Qui Phung; Patrick Wu; Zhaojun Yin; Sien Tam; Peter Tran; Adel M ElSohly; Joshua Gober; Zicheng Hu; Zhenru Zhou; Sivan Cohen; Dongping He; Travis W Bainbridge; Christopher C Kemball; Jonathan Zarzar; Alavattam Sreedhara; Nicole Stephens; Jérémie Decalf; Christine Moussion; Zhengmao Ye; Mercedesz Balazs; Yinyin Li. "A single point mutation on FLT3L-Fc protein increases the risk of immunogenicity." Frontiers in immunology (2025).

Epitope: FLT3L-Fc-W144D 13mer
Chemical type: Peptide, no natural source
Sequence: TSEQLVALKPDITR
Assay category: MhcLigandElution
Result: Positive

Epitope: FLT3L-Fc-Wt 13mer
Chemical type: Peptide from protein
Sequence: TSEQLVALKPWITR
Position: 134-147
Source molecule (GenBank): P49771.1
Assay category: MhcLigandElution
Result: Positive-Low
Reference: Jiajia Zhang; Ziyan Sun; Shaohua Sun; Kaili Zhang; Dafu Deng; Ping He; Pingping Zhang; Nengwen Xia; Sen Jiang; Wanglong Zheng; Francois Meurens; Jianzhong Zhu. "The capsid protein p72 specific mAb and the corresponding novel epitope based ELISAs for detection of ASFV infection." Veterinary microbiology (2025).

Epitope: ASFV p72 101-114
Chemical type: Peptide from protein
Sequence: FHDMVGHHILGACH
Position: 101-114
Source molecule (GenBank): UZM07850.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: ASFV p72 101-114
Chemical type: Peptide from protein
Sequence: FHDMVGHHILGACH
Position: 101-114
Source molecule (GenBank): UZM07850.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: ASFV p72 101-114
Chemical type: Peptide from protein
Sequence: FHDMVGHHILGACH
Position: 101-114
Source molecule (GenBank): UZM07850.1
Assay category: BCell
Result: Positive

Epitope: ASFV p72 101-114
Chemical type: Peptide from protein
Sequence: FHDMVGHHILGACH
Position: 101-114
Source molecule (GenBank): UZM07850.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: ASFV p72 101-114
Chemical type: Peptide from protein
Sequence: FHDMVGHHILGACH
Position: 101-114
Source molecule (GenBank): UZM07850.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: ASFV p72 101-114
Chemical type: Peptide from protein
Sequence: FHDMVGHHILGACH
Position: 101-114
Source molecule (GenBank): UZM07850.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Grace Freeman-Gallant; Kathleen McCarthy; Jennifer Yates; Karen Kulas; Michael J Rudolph; David J Vance; Nicholas J Mantis. "A Refined Human Linear B Cell Epitope Map of Outer Surface Protein C (OspC) From the Lyme Disease Spirochete, ." Pathogens & immunity (2024).

Epitope: OspC 40-55K
Chemical type: Peptide from protein
Sequence: PNLTEISKKITESNAV
Position: 40-55
Source molecule (GenBank): Q8RMD9
Assay category: BCell
Result: Positive-Low

Epitope: OspC 40-55K
Chemical type: Peptide from protein
Sequence: PNLTEISKKITESNAV
Position: 40-55
Source molecule (GenBank): Q8RMD9
Assay category: BCell
Result: Positive-Low

Epitope: OspC 71-86A
Chemical type: Peptide from protein
Sequence: EIAAKAIGKKIHQNNG
Position: 71-86
Source molecule (GenBank): Q07337.1
Assay category: BCell
Result: Positive-Low

Epitope: OspC 71-86A
Chemical type: Peptide from protein
Sequence: EIAAKAIGKKIHQNNG
Position: 71-86
Source molecule (GenBank): Q07337.1
Assay category: BCell
Result: Positive-Low

Epitope: VlsE C6-17
Chemical type: Peptide from protein
Sequence: MKKDDQIAAAIALRGMA
Position: 273-289
Source molecule (GenBank): Q5DVL8
Assay category: BCell
Result: Positive-High
Reference: Serena Stadler; Rafael B Blasco; Vijay Kumar Singh; Christine Damm-Welk; Amin Ben-Hamza; Carlotta Welters; Leo Hansmann; Roberto Chiarle; Wilhelm Woessmann. "Endogenous CD4+ T Cells That Recognize ALK and the NPM1::ALK Fusion Protein Can Be Expanded from Human Peripheral Blood." Cancer immunology research (2025).

Epitope: NT3
Chemical type: Peptide from protein
Sequence: TSTIMTDYNPNYCFAGKTSSISDLKEVPRK
Position: 1085-1114
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NT4
Chemical type: Peptide from protein
Sequence: AGKTSSISDLKEVPRKNITLIRGLGHGAFG
Position: 1099-1128
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: A6
Chemical type: Peptide from protein
Sequence: IGVSLQSLPRFILLELMAGGDLKSFLRETR
Position: 1183-1212
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: B2_B1
Chemical type: Peptide from protein
Sequence: NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP
Position: 1178-1213
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: C6
Chemical type: Peptide from protein
Sequence: PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL
Position: 1351-1380
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CT2
Chemical type: Peptide from protein
Sequence: TGRLPGASLLLEPSSLTANMKEVPLFRLRH
Position: 1547-1576
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CT4
Chemical type: Peptide from protein
Sequence: RHFPCGNVNYGYQQQGLPLEAATAPGAGHY
Position: 1575-1604
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CT5
Chemical type: Peptide from protein
Sequence: QGLPLEAATAPGAGHYEDTILKSKNSMNQP
Position: 1589-1618
Source molecule (GenBank): Q9UM73.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Anthony Maino; Ekaterina Bourov A-Flin; Thomas Decaens; Saadi Khochbin; Zuzana Macek Jilkova; Sophie Rousseaux; Joel Plumas; Philippe Saas; Laurence Chaperot; Olivier Manches. "Identification of immunogenic HLA-A*02:01 epitopes associated with HCC for immunotherapy development." Hepatology communications (2025).

Epitope: TIGD3 P1
Chemical type: Peptide from protein
Sequence: VLLGGLQAA
Position: 211-219
Source molecule (GenBank): Q6B0B8.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TIGD3 P1
Chemical type: Peptide from protein
Sequence: VLLGGLQAA
Position: 211-219
Source molecule (GenBank): Q6B0B8.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TIGD3 P1
Chemical type: Peptide from protein
Sequence: VLLGGLQAA
Position: 211-219
Source molecule (GenBank): Q6B0B8.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TIGD3 P1
Chemical type: Peptide from protein
Sequence: VLLGGLQAA
Position: 211-219
Source molecule (GenBank): Q6B0B8.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TIGD3 P1
Chemical type: Peptide from protein
Sequence: VLLGGLQAA
Position: 211-219
Source molecule (GenBank): Q6B0B8.1
Assay category: MhcBinding
Result: Positive

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: TCell
Result: Positive-High
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MAG P1E-A
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43365.2
Assay category: MhcBinding
Result: Positive
Reference: Katja G Schmidt; Paulina Geißler; Ev-Marie Schuster; Christine Schülein; Ellen G Harrer; Verena Schönau; Markus Luber; Bernd Spriewald; Philipp Steininger; Silke Bergmann; Armin Ensser; Kilian Schober; Krystelle Nganou-Makamdop; Thomas Harrer. "Coronavirus replicase epitopes induce cross-reactive CD8 T cell responses in SARS-CoV-2-naive people with HIV-1." iScience (2025).

Epitope: FA20
Chemical type: Peptide from protein
Sequence: FAYTKRNVIPTITQMNLKYA
Position: 4920-4939
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: FA20
Chemical type: Peptide from protein
Sequence: FAYTKRNVIPTITQMNLKYA
Position: 4920-4939
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: YL8
Chemical type: Peptide from protein
Sequence: YPDPSRIL
Position: 5223-5230
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: YL8
Chemical type: Peptide from protein
Sequence: YPDPSRIL
Position: 5223-5230
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: YL8
Chemical type: Peptide from protein
Sequence: YPDPSRIL
Position: 5223-5230
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: YL8
Chemical type: Peptide from protein
Sequence: YPDPSRIL
Position: 5223-5230
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive
Reference: Yasuto Akiyama; Chie Oshita; Akiko Kume; Akira Iizuka; Haruo Miyata; Masaru Komiyama; Tadashi Ashizawa; Mika Yagoto; Yoshiaki Abe; Koichi Mitsuya; Reiko Watanabe; Takashi Sugino; Ken Yamaguchi; Yoko Nakasu. "α-type-1 polarized dendritic cell-based vaccination in recurrent high-grade glioma: a phase I clinical trial." BMC cancer (2012).

Epitope: WT1-126
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Negative
Host: M 73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MAGE A3-271
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43357.1
Assay category: TCell
Result: Negative
Host: M 73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Angelos D Gritzapis; Ioannis F Voutsas; Constantin N Baxevanis. "Ontak reduces the immunosuppressive tumor environment and enhances successful therapeutic vaccination in HER-2/neu-tolerant mice." Cancer immunology, immunotherapy : CII (2012).

Epitope: HER-2(85–94) p85
Chemical type: Peptide from protein
Sequence: LIAHNQVRQV
Position: 85-94
Source molecule (GenBank): AAA75493.1
Assay category: TCell
Result: Positive
Host: M

Epitope: HER-2(85–94) p85
Chemical type: Peptide from protein
Sequence: LIAHNQVRQV
Position: 85-94
Source molecule (GenBank): AAA75493.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HER-2(85–94) p85
Chemical type: Peptide from protein
Sequence: LIAHNQVRQV
Position: 85-94
Source molecule (GenBank): AAA75493.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HER-2(85–94) p85
Chemical type: Peptide from protein
Sequence: LIAHNQVRQV
Position: 85-94
Source molecule (GenBank): AAA75493.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: tumor infiltrating lymphocyte
Culture conditions: Direct Ex Vivo
Reference: Chie Oshita; Masako Takikawa; Akiko Kume; Haruo Miyata; Tadashi Ashizawa; Akira Iizuka; Yoshio Kiyohara; Shusuke Yoshikawa; Ryuji Tanosaki; Naoya Yamazaki; Akifumi Yamamoto; Kazutoh Takesako; Ken Yamaguchi; Yasuto Akiyama. "Dendritic cell-based vaccination in metastatic melanoma patients: phase II clinical trial." Oncology reports (2012).

Epitope: MAGE-3 271-279
Chemical type: Peptide from protein
Sequence: FLWGPRALV
Position: 271-279
Source molecule (GenBank): P43357.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Paola Filipazzi; Lorenzo Pilla; Luigi Mariani; Roberto Patuzzo; Chiara Castelli; Chiara Camisaschi; Andrea Maurichi; Agata Cova; Gianluigi Rigamonti; Felicetta Giardino; Annabella Di Florio; Marco Asioli; Paola Frati; Gloria Sovena; Paola Squarcina; Michele Maio; Riccardo Danielli; Vanna Chiarion-Sileni; Antonello Villa; Claudia Lombardo; Gabrina Tragni; Mario Santinami; Giorgio Parmiani; Licia Rivoltini. "Limited induction of tumor cross-reactive T cells without a measurable clinical benefit in early melanoma patients vaccinated with human leukocyte antigen class I-modified peptides." Clinical cancer research : an official journal of the American Association for Cancer Research (2012).

Epitope: MART-1
Chemical type: Peptide from protein
Sequence: AAGIGILTV
Position: 27-35
Source molecule (GenBank): U06654
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: gp100
Chemical type: Peptide from protein
Sequence: ITDQVPFSV
Position: 209-217
Source molecule (GenBank): AAB31176.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated