LiteFold/IEDB huggingface dataset:
Reference: Kunal H Bhatt; Michelle A Neller; Sriganesh Srihari; Pauline Crooks; Lea Lekieffre; Blake T Aftab; Howard Liu; Corey Smith; Liz Kenny; Sandro Porceddu; Rajiv Khanna. "Profiling HPV-16-specific T cell responses reveals broad antigen reactivities in oropharyngeal cancer patients." The Journal of experimental medicine (2020).

Epitope: HPV-16-E2 138-148
Chemical type: Peptide from protein
Sequence: YICEEASVTVV
Position: 138-148
Source molecule (GenBank): P03120.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: HPV-16-E7 73-87
Chemical type: Peptide from protein
Sequence: HVDIRTLEDLLMGTL
Position: 73-87
Source molecule (GenBank): P03129
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: HPV-16-E1 353-367
Chemical type: Peptide from protein
Sequence: CTFELSQMVQWAYDN
Position: 353-367
Source molecule (GenBank): P03114.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: HPV-16-E2 9-27
Chemical type: Peptide from protein
Sequence: NVCQDKILTHYENDSTDLR
Position: 9-27
Source molecule (GenBank): P03120.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: HPV-16-E6 121-139
Chemical type: Peptide from protein
Sequence: EKQRHLDKKQRFHNIRGRW
Position: 121-139
Source molecule (GenBank): P03126
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Haoyang Li; Tierra Buck; Michelle Zandonatti; Jieyun Yin; Alex Moon-Walker; Jingru Fang; Anatoliy Koval; Megan L Heinrich; Megan M Rowland; Ruben Diaz Avalos; Sharon L Schendel; Diptiben Parekh; Dawid Zyla; Adrian Enriquez; Stephanie Harkins; Brian Sullivan; Victoria Smith; Onyeka Chukwudozie; Reika Watanabe; James E Robinson; Robert F Garry; Luis M Branco; Kathryn M Hastie; Erica Ollmann Saphire. "A cocktail of protective antibodies subverts the dense glycan shield of Lassa virus." Science translational medicine (2022).

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive

Epitope: Epitope of 12.1F on LASV GPC
Chemical type: Discontinuous protein residues
Discontinuous residues: S91, H92, L107, T108, N109, T110, S111, I112, N114, K161, Y217, Y219
Source molecule (GenBank): P08669.1
Assay category: BCell
Result: Positive
Reference: Sineenat Sripattanakul; Teerasak Prapong; Attapon Kamlangdee; Gerd Katzenmeier; Dietmar Haltrich; Ratchanee Hongprayoon; Siriwan Prapong. "Leucine-Rich Repeat Proteins and Derived Peptides in an Indirect ELISA Development for the Diagnosis of Canine Leptospiral Infections." Tropical medicine and infectious disease (2022).

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Negative

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive

Epitope: 2012-1B
Chemical type: Peptide from protein
Sequence: LDEKDSATESN
Position: 14-24
Source molecule (GenBank): AFO83474.1
Assay category: BCell
Result: Positive
Reference: Mariliis Jaago; Annika Rähni; Nadežda Pupina; Arno Pihlak; Helle Sadam; Jürgen Tuvikene; Annela Avarlaid; Anu Planken; Margus Planken; Liina Haring; Eero Vasar; Miljana Baćević; France Lambert; Eija Kalso; Pirkko Pussinen; Pentti J Tienari; Antti Vaheri; Dan Lindholm; Tõnis Timmusk; Amir M Ghaemmaghami; Kaia Palm. "Differential patterns of cross-reactive antibody response against SARS-CoV-2 spike protein detected for chronically ill and healthy COVID-19 naïve individuals." Scientific reports (2022).

Epitope: S1.1-NTALTEDNSFQR
Chemical type: Peptide, no natural source
Sequence: NTALTEDNSFQR
Assay category: BCell
Result: Positive

Epitope: S1.3-NETLIPKLGNRM
Chemical type: Peptide, no natural source
Sequence: NETLIPKLGNRM
Assay category: BCell
Result: Positive

Epitope: S1.4-SQHQVPTKLFKL
Chemical type: Peptide, no natural source
Sequence: SQHQVPTKLFKL
Assay category: BCell
Result: Positive

Epitope: S1.4-QSLPTKLSKLPT
Chemical type: Peptide, no natural source
Sequence: QSLPTKLSKLPT
Assay category: BCell
Result: Positive

Epitope: S1.4-LPTPTKLLKLSL
Chemical type: Peptide, no natural source
Sequence: LPTPTKLLKLSL
Assay category: BCell
Result: Positive

Epitope: S1.4-QPTKLHKLTLLD
Chemical type: Peptide, no natural source
Sequence: QPTKLHKLTLLD
Assay category: BCell
Result: Positive

Epitope: S1.5-DKAPRTDIYTQV
Chemical type: Peptide, no natural source
Sequence: DKAPRTDIYTQV
Assay category: BCell
Result: Positive

Epitope: S1.7-SFGRLHQDITNK
Chemical type: Peptide, no natural source
Sequence: SFGRLHQDITNK
Assay category: BCell
Result: Positive

Epitope: S1.8-VVDYFPQTLYKS
Chemical type: Peptide, no natural source
Sequence: VVDYFPQTLYKS
Assay category: BCell
Result: Positive

Epitope: S1.9-QHSGTNTSSLIV
Chemical type: Peptide, no natural source
Sequence: QHSGTNTSSLIV
Assay category: BCell
Result: Positive

Epitope: S2.2-FGPIPPDTDKPM
Chemical type: Peptide, no natural source
Sequence: FGPIPPDTDKPM
Assay category: BCell
Result: Positive

Epitope: S2.2-MIPPNTSKPAPL
Chemical type: Peptide, no natural source
Sequence: MIPPNTSKPAPL
Assay category: BCell
Result: Positive

Epitope: S2.3-RVVHPALNMYEQ
Chemical type: Peptide, no natural source
Sequence: RVVHPALNMYEQ
Assay category: BCell
Result: Positive

Epitope: S2.3-LPRVTPALTSSE
Chemical type: Peptide, no natural source
Sequence: LPRVTPALTSSE
Assay category: BCell
Result: Positive

Epitope: S2.5-AELSKNFKNKIS
Chemical type: Peptide, no natural source
Sequence: AELSKNFKNKIS
Assay category: BCell
Result: Positive
Reference: H M Emranul Haque; Monir Ejemel; David J Vance; Graham Willsey; Michael J Rudolph; Lisa A Cavacini; Yang Wang; Nicholas J Mantis; David D Weis. "Human B Cell Epitope Map of the Lyme Disease Vaccine Antigen, OspA." ACS infectious diseases (2022).

Epitope: Epitope of mAb 319-33 on OspA
Chemical type: Peptide from protein
Sequence: QYDSNGTKLEGSA
Position: 247-259
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb 319-33 on OspA
Chemical type: Peptide from protein
Sequence: QYDSNGTKLEGSA
Position: 247-259
Source molecule (GenBank): P0CL66.1
Assay category: BCell
Result: Positive
Quantitative measurement: 27.0
Reference: Chunxiang Shen; Xinyi Zhu; Xuejun Xu; Hao Chang; Yangyue Ni; Chen Li; Kaiyue He; Lin Chen; Lu Chen; Min Hou; Minjun Ji; Zhipeng Xu. "Identification and Characterization of Antigenic Properties of  Heat Shock Protein 90α Derived Peptides." Pathogens (Basel, Switzerland) (2022).

Epitope: Sjp90α-2
Chemical type: Peptide from protein
Sequence: GKKLVCVTKDGLQL
Position: 65-78
Source molecule (GenBank): CAX70123.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Dan Yin; Renhao Geng; Hongxia Shao; Jianqiang Ye; Kun Qian; Hongjun Chen; Aijian Qin. "Identification of novel linear epitopes in P72 protein of African swine fever virus recognized by monoclonal antibodies." Frontiers in microbiology (2022).

Epitope: 5H4 epitope
Chemical type: Peptide from protein
Sequence: ERLYE
Position: 185-189
Source molecule (GenBank): QIE06872.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: 5H4 epitope
Chemical type: Peptide from protein
Sequence: ERLYE
Position: 185-189
Source molecule (GenBank): QIE06872.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: 5H4 epitope
Chemical type: Peptide from protein
Sequence: ERLYE
Position: 185-189
Source molecule (GenBank): QIE06872.1
Assay category: BCell
Result: Positive
Host:  6 weeks
Reference: Ling Wang; Juan Zhao; Madison Schank; Sushant Khanal; Xindi Dang; Dechao Cao; Lam N T Nguyen; Yi Zhang; Xiao Y Wu; James L Adkins; Justin Brueggeman; Jinyu Zhang; Shunbin Ning; Mohamed El Gazzar; Jonathan P Moorman; Zhi Q Yao. "Identification of virus-specific B-cell epitopes by convalescent plasma from COVID-19 patients." Molecular immunology (2022).

Epitope: SARS-CoV-2 S 557–571
Chemical type: Peptide from protein
Sequence: KKFLPFQQFGRDIAD
Position: 557-571
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low
Host:  18-83 years

Epitope: SARS-CoV-2 S 557–571
Chemical type: Peptide from protein
Sequence: KKFLPFQQFGRDIAD
Position: 557-571
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive-Low
Host:  18-83 years

Epitope: SARS-CoV-2 S 557–571
Chemical type: Peptide from protein
Sequence: KKFLPFQQFGRDIAD
Position: 557-571
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host:  18-83 years

Epitope: SARS-CoV-2 M 5-19
Chemical type: Peptide from protein
Sequence: NGTITVEELKKLLEQ
Position: 5-19
Source molecule (GenBank): P0DTC5.1
Assay category: BCell
Result: Positive
Host:  18-83 years

Epitope: SARS-CoV-2 M 5-19
Chemical type: Peptide from protein
Sequence: NGTITVEELKKLLEQ
Position: 5-19
Source molecule (GenBank): P0DTC5.1
Assay category: BCell
Result: Positive-Low
Host:  18-83 years

Epitope: SARS-CoV-2 M 5-19
Chemical type: Peptide from protein
Sequence: NGTITVEELKKLLEQ
Position: 5-19
Source molecule (GenBank): P0DTC5.1
Assay category: BCell
Result: Negative
Host:  18-83 years
Reference: Cilia R Pothast; Romy C Dijkland; Melissa Thaler; Renate S Hagedoorn; Michel G D Kester; Anne K Wouters; Pieter S Hiemstra; Martijn J van Hemert; Stephanie Gras; J H Frederik Falkenburg; Mirjam H M Heemskerk. "SARS-CoV-2-specific CD4<sup>+</sup> and CD8<sup>+</sup> T cell responses can originate from cross-reactive CMV-specific T cells." eLife (2022).

Epitope: IPS, pp65 112-121
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: IPS, pp65 112-121
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: IPS, pp65 112-121
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: IPS, pp65 112-121
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: IPS, pp65 112-121
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Haixia Li; Dani Zhong; Huiguan Luo; Wei Shi; Shenxia Xie; Hangbiao Qiang; Lichen Zhu; Li Gao; Jun Liu; Shuyang Sun; Ziqiang Ding; Xiaomei Yang; Xiaoling Lu. "Nanobody-based CAR T cells targeting intracellular tumor antigens." Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie (2022).

Epitope: HLA-A2/WT1-126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: BCell
Result: Positive
Quantitative measurement: 8.9

Epitope: HLA-A2/WT1-126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: BCell
Result: Positive

Epitope: HLA-A2/WT1-126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: BCell
Result: Positive

Epitope: HLA-A2/WT1-126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: BCell
Result: Positive

Epitope: HLA-A2/WT1-126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: BCell
Result: Positive
Reference: Qixing Li; Yanpeng Li; Bibo Liang; Rui Xu; Bingze Xu; Erik Lönnblom; Hui Feng; Jing'an Bai; Roma Stawikowska; Changrong Ge; Aiping Lu; Gregg B Fields; Lianbo Xiao; Rikard Holmdahl. "Rheumatoid arthritis sera antibodies to citrullinated collagen type II bind to joint cartilage." Arthritis research & therapy (2022).

Epitope: CII_C_E10_R
Chemical type: Peptide from protein
Sequence: PQGLAGQRGIVGLPG
Position: 973-987
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_C_E10_R
Chemical type: Peptide from protein
Sequence: PQGLAGQRGIVGLPG
Position: 973-987
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_C_E10_R
Chemical type: Peptide from protein
Sequence: PQGLAGQRGIVGLPG
Position: 973-987
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_C_(C1)_[CIT]-R
Chemical type: Peptide from protein
Sequence: EPGLPGARGLTGRPG
Position: 553-567
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_C_(C1)_[CIT]-R
Chemical type: Peptide from protein
Sequence: EPGLPGARGLTGRPG
Position: 553-567
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Positive

Epitope: CII_C_(C1)_[CIT]-R
Chemical type: Peptide from protein
Sequence: EPGLPGARGLTGRPG
Position: 553-567
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Positive

Epitope: CII_T_E17
Chemical type: Peptide from protein
Sequence: GTPGSPGPAGASGNPGTDGIPGAK
Position: 396-419
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_T_E17
Chemical type: Peptide from protein
Sequence: GTPGSPGPAGASGNPGTDGIPGAK
Position: 396-419
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_T_59
Chemical type: Peptide from protein
Sequence: GASGDRGPPGPVGPPGLTGPAGEP
Position: 1011-1034
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_T_59
Chemical type: Peptide from protein
Sequence: GASGDRGPPGPVGPPGLTGPAGEP
Position: 1011-1034
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_T_59
Chemical type: Peptide from protein
Sequence: GASGDRGPPGPVGPPGLTGPAGEP
Position: 1011-1034
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative

Epitope: CII_T_D3_CIT
Chemical type: Peptide from protein
Sequence: GPTGVTGPKGARGAQGPPGATGFP
Position: 876-899
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Positive

Epitope: CII_T_D3_CIT
Chemical type: Peptide from protein
Sequence: GPTGVTGPKGARGAQGPPGATGFP
Position: 876-899
Source molecule (GenBank): P02458.3
Assay category: BCell
Result: Negative
Reference: Cheol-Hwa Hong; Hong-Seon Pyo; In-Cheol Baek; Tai-Gyu Kim. "Rapid identification of CMV-specific TCRs via reverse TCR cloning system based on bulk TCR repertoire data." Frontiers in immunology (2022).

Epitope: LMP1 166-174
Chemical type: Peptide from protein
Sequence: TLLVDLLWL
Position: 166-174
Source molecule (GenBank): AEM00662.1
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Wenping Gong; Yan Liang; Jie Mi; Yong Xue; Jie Wang; Lan Wang; Yusen Zhou; Shihui Sun; Xueqiong Wu. "A peptide-based vaccine ACP derived from antigens of Mycobacterium tuberculosis induced Th1 response but failed to enhance the protective efficacy of BCG in mice." The Indian journal of tuberculosis (2022).

Epitope: Ag85A49-63
Chemical type: Peptide from protein
Sequence: LPVEYLQVPSPSMGR
Position: 49-63
Source molecule (GenBank): P0A4V2.1
Assay category: TCell
Result: Positive-Low
Host: F 7-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Poonsook Keelapang; Piyada Supasa; Rungtawan Sriburi; Chunya Puttikhunt; Jane Cardosa; Watchara Kasinrerk; Prida Malasit; Nopporn Sittisombut. "A group of infection-enhancing and focus size-reducing monoclonal antibodies recognized an 'a and c' strands epitope in the pr domain of Dengue Virus prM." Virus research (2023).

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Negative
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Negative
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Negative
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Negative
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: DM4/4/A6/A9
Chemical type: Discontinuous protein residues
Discontinuous residues: L117,T119,K135
Source molecule (GenBank): QRG47129.1
Assay category: BCell
Result: Negative
Host:  6 weeks
Reference: Hideki Ogura; Jin Gohda; Xiuyuan Lu; Mizuki Yamamoto; Yoshio Takesue; Aoi Son; Sadayuki Doi; Kazuyuki Matsushita; Fumitaka Isobe; Yoshihiro Fukuda; Tai-Ping Huang; Takamasa Ueno; Naomi Mambo; Hiromoto Murakami; Yasushi Kawaguchi; Jun-Ichiro Inoue; Kunihiro Shirai; Sho Yamasaki; Jun-Ichi Hirata; Satoshi Ishido. "Dysfunctional Sars-CoV-2-M protein-specific cytotoxic T lymphocytes in patients recovering from severe COVID-19." Nature communications (2022).

Epitope: M95-103
Chemical type: Peptide from protein
Sequence: YFIASFRLF
Position: 95-103
Source molecule (GenBank): YP_009724393.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: M95-103
Chemical type: Peptide from protein
Sequence: YFIASFRLF
Position: 95-103
Source molecule (GenBank): YP_009724393.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: S1208-1216
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): YP_009724390.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Bently P Doonan; Shereen Amria; Jennifer R Bethard; Narendra L Banik; Jessica D Hathaway-Schrader; Azizul Haque. "Peptide Modification Diminishes HLA Class II-restricted CD4<sup>+</sup> T Cell Recognition of Prostate Cancer Cells." International journal of molecular sciences (2022).

Epitope: PSMA459
Chemical type: Peptide from protein
Sequence: NYTLRVDCTPLMYSL
Position: 459-473
Source molecule (GenBank): Q04609.1
Assay category: TCell
Result: Positive
MHC allele types: 341
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone