LiteFold/IEDB huggingface dataset:
Reference: Damien Bresson; Matthew Fradkin; Yulia Manenkova; Diane Rottembourg; Matthias von Herrath. "Genetic-induced variations in the GAD65 T-cell repertoire governs efficacy of anti-CD3/GAD65 combination therapy in new-onset type 1 diabetes." Molecular therapy : the journal of the American Society of Gene Therapy (2010).

Epitope: Peptide 54
Chemical type: Peptide from protein
Sequence: PVIKARMMEYGTTMVSYQPL
Position: 531-550
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Positive
Host:  8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 57
Chemical type: Peptide from protein
Sequence: ISNPAATHQDIDFLIEEIER
Position: 561-580
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Positive
Host:  8-12 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: L Alvarenga; V Moreau; L Felicori; C Nguyen; C Duarte; C Chavez-Olortegui; F Molina; M-F Martin-Eauclaire; C Granier. "Design of antibody-reactive peptides from discontinuous parts of scorpion toxins." Vaccine (2010).

Epitope: Scorpion Amm VIII peptide 9
Chemical type: Peptide, no natural source
Sequence: DHRTKYYYNEIKLKES
Assay category: BCell
Result: Negative

Epitope: Scorpion Amm VIII peptide 12
Chemical type: Peptide, no natural source
Sequence: YYQWAPYGYFRNAYNE
Assay category: BCell
Result: Negative

Epitope: Scorpion Amm VIII peptide 19
Chemical type: Peptide, no natural source
Sequence: YNEIKLKESYKLKDY
Assay category: BCell
Result: Negative

Epitope: Scorpion Amm VIII peptide 20
Chemical type: Peptide, no natural source
Sequence: RNAYNEIKLKESY
Assay category: BCell
Result: Negative

Epitope: AaH II peptide 4-13
Chemical type: Peptide from protein
Sequence: YIVDDVNCT
Position: 5-13
Source molecule (GenBank): 1AHO_A
Assay category: BCell
Result: Positive
Reference: H de Jong; S E Berlo; P Hombrink; H G Otten; W van Eden; F P Lafeber; A H M Heurkens; J W J Bijlsma; T T Glant; B J Prakken. "Cartilage proteoglycan aggrecan epitopes induce proinflammatory autoreactive T-cell responses in rheumatoid arthritis and osteoarthritis." Annals of the rheumatic diseases (2010).

Epitope: p61–76
Chemical type: Peptide from protein
Sequence: KEKEVVLLVATEGRVR
Position: 80-95
Source molecule (GenBank): NP_001126.1
Assay category: TCell
Result: Positive-Low
Host:  mean: 60.5 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: p61–76
Chemical type: Peptide from protein
Sequence: KEKEVVLLVATEGRVR
Position: 80-95
Source molecule (GenBank): NP_001126.1
Assay category: TCell
Result: Positive-Low
Host:  mean: 36.9 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: pYersinia 68–82
Chemical type: Peptide from protein
Sequence: QKQLGWQAGMDEART
Position: 68-82
Source molecule (GenBank): Q01253.1
Assay category: TCell
Result: Positive
Host:  mean: 60.5 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: pYersinia 68–82
Chemical type: Peptide from protein
Sequence: QKQLGWQAGMDEART
Position: 68-82
Source molecule (GenBank): Q01253.1
Assay category: TCell
Result: Negative
Host:  mean: 36.9 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Sandra Braun; Christoph Berg; Sandra Buck; Michael Gregor; Reinhild Klein. "Catalytic domain of PDC-E2 contains epitopes recognized by antimitochondrial antibodies in primary biliary cirrhosis." World journal of gastroenterology : WJG (2010).

Epitope: PDC-E2 Peptide 8
Chemical type: Peptide from protein
Sequence: PTPSAQAPGSSYPPHMQVLLPALSP
Position: 204-228
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Positive
Host:  21-70 years

Epitope: PDC-E2 Peptide 8
Chemical type: Peptide from protein
Sequence: PTPSAQAPGSSYPPHMQVLLPALSP
Position: 204-228
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Negative

Epitope: PDC-E2 Peptide 8
Chemical type: Peptide from protein
Sequence: PTPSAQAPGSSYPPHMQVLLPALSP
Position: 204-228
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Negative

Epitope: PDC-E2 Peptide 8
Chemical type: Peptide from protein
Sequence: PTPSAQAPGSSYPPHMQVLLPALSP
Position: 204-228
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Negative
Host:  21-70 years

Epitope: PDC-E2 Peptide 16
Chemical type: Peptide from protein
Sequence: PSTPCPATPAGPKGRVFVDPLAKKL
Position: 307-331
Source molecule (GenBank): P10515.2
Assay category: BCell
Result: Positive
Host:  21-70 years

Epitope: PDC-E2 Peptide 16
Chemical type: Peptide from protein
Sequence: PSTPCPATPAGPKGRVFVDPLAKKL
Position: 307-331
Source molecule (GenBank): P10515.2
Assay category: BCell
Result: Negative

Epitope: PDC-E2 Peptide 16
Chemical type: Peptide from protein
Sequence: PSTPCPATPAGPKGRVFVDPLAKKL
Position: 307-331
Source molecule (GenBank): P10515.2
Assay category: BCell
Result: Negative

Epitope: PDC-E2 Peptide 16
Chemical type: Peptide from protein
Sequence: PSTPCPATPAGPKGRVFVDPLAKKL
Position: 307-331
Source molecule (GenBank): P10515.2
Assay category: BCell
Result: Positive
Host:  21-70 years

Epitope: PDC-E2 Peptide 24
Chemical type: Peptide from protein
Sequence: VNDFIIKASALACLKVPEANSSWMD
Position: 476-500
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Negative
Host:  21-70 years

Epitope: PDC-E2 Peptide 24
Chemical type: Peptide from protein
Sequence: VNDFIIKASALACLKVPEANSSWMD
Position: 476-500
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Positive

Epitope: PDC-E2 Peptide 24
Chemical type: Peptide from protein
Sequence: VNDFIIKASALACLKVPEANSSWMD
Position: 476-500
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Negative
Host:  21-70 years

Epitope: PDC-E2 Peptide 24
Chemical type: Peptide from protein
Sequence: VNDFIIKASALACLKVPEANSSWMD
Position: 476-500
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Negative

Epitope: PDC-E2 167-184
Chemical type: Peptide from protein
Sequence: AEIETDKATIGFEVQEEG
Position: 253-270
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Positive
Host:  21-70 years

Epitope: PDC-E2 167-184
Chemical type: Peptide from protein
Sequence: AEIETDKATIGFEVQEEG
Position: 253-270
Source molecule (GenBank): EAW67174.1
Assay category: BCell
Result: Positive
Host:  21-70 years
Reference: Francesco Lolli; Barbara Mulinacci; Alfonso Carotenuto; Bruno Bonetti; Giuseppina Sabatino; Benedetta Mazzanti; Anna Maria D'Ursi; Ettore Novellino; Marta Pazzagli; Laura Lovato; Maria C Alcaro; Elisa Peroni; Maria C Pozo-Carrero; Francesca Nuti; Luca Battistini; Giovanna Borsellino; Mario Chelli; Paolo Rovero; Anna Maria Papini. "An N-glucosylated peptide detecting disease-specific autoantibodies, biomarkers of multiple sclerosis." Proceedings of the National Academy of Sciences of the United States of America (2005).

Epitope: Peptide 1' (hMOG(30–50))
Chemical type: Peptide from protein
Sequence: KNATGMEVGWYRPPFSRVVHL
Position: 29-49
Source molecule (GenBank): CAQ06620.1
Assay category: BCell
Result: Negative
Host:  20-60 years

Epitope: Peptide 1' (hMOG(30–50))
Chemical type: Peptide from protein
Sequence: KNATGMEVGWYRPPFSRVVHL
Position: 29-49
Source molecule (GenBank): CAQ06620.1
Assay category: BCell
Result: Negative
Host:  20-60 years
Reference: J Lori Blanchfield; Mark D Mannie. "A GMCSF-neuroantigen fusion protein is a potent tolerogen in experimental autoimmune encephalomyelitis (EAE) that is associated with efficient targeting of neuroantigen to APC." Journal of leukocyte biology (2010).

Epitope: GPMBP 69-87
Chemical type: Peptide from protein
Sequence: YGSLPQKSQRSQDENPVVH
Position: 69-87
Source molecule (GenBank): P25188.1
Assay category: TCell
Result: Positive

Epitope: GPMBP 69-87
Chemical type: Peptide from protein
Sequence: YGSLPQKSQRSQDENPVVH
Position: 69-87
Source molecule (GenBank): P25188.1
Assay category: TCell
Result: Positive

Epitope: GPMBP 69-87
Chemical type: Peptide from protein
Sequence: YGSLPQKSQRSQDENPVVH
Position: 69-87
Source molecule (GenBank): P25188.1
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: lymph node
Culture conditions: Cell Line / Clone
Reference: Michał Arabski; Iwona Konieczna; Dariusz Sołowiej; Alicja Rogoń; Beata Kolesińska; Zbigniew Kamiński; Wiesław Kaca. "Are anti-Helicobacter pylori urease antibodies involved in atherosclerotic diseases?" Clinical biochemistry (2010).

Epitope: BK-61A peptide
Chemical type: Peptide from protein
Sequence: SIKEDVQF
Position: 327-334
Source molecule (GenBank): P69996.1
Assay category: BCell
Result: Positive
Host:  37-78 years
Reference: Celine Serangeli; Oliver Bicanic; Michael H Scheible; Dorothee Wernet; Peter Lang; Hans-Georg Rammensee; Stefan Stevanovic; Rupert Handgretinger; Tobias Feuchtinger. "Ex vivo detection of adenovirus specific CD4+ T-cell responses to HLA-DR-epitopes of the Hexon protein show a contracted specificity of T(HELPER) cells following stem cell transplantation." Virology (2010).

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Hexon 40002
Chemical type: Peptide from protein
Sequence: LMYYNSTGNMGVLAG
Position: 336-350
Source molecule (GenBank): P04133.3
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Sandra Giest; Sarah Grace; Alexandra C Senegaglia; Ricardo Pasquini; Rosa M Gonzalo-Daganzo; Manuel N Fernández; Stephen Mackinnon; J Alejandro Madrigal; Paul J Travers. "Cytomegalovirus-specific CD8(+) T cells targeting different HLA/peptide combinations correlate with protection but at different threshold frequencies." British journal of haematology (2010).

Epitope: B35/CMV pp65 (123-131)
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): YP_002608275.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A1/CMV pp50 (245-253)
Chemical type: Peptide from protein
Sequence: VTEHDTLLY
Position: 245-253
Source molecule (GenBank): AAO73452.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Rosa Faner; Eddie James; Laurie Huston; Ricardo Pujol-Borrel; William W Kwok; Manel Juan. "Reassessing the role of HLA-DRB3 T-cell responses: evidence for significant expression and complementary antigen presentation." European journal of immunology (2010).

Epitope: TT p5
Chemical type: Peptide from protein
Sequence: QDEIVSYNTKNKPLNFNYSL
Position: 490-509
Source molecule (GenBank): P04958.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TT p7
Chemical type: Peptide from protein
Sequence: NYSLDKIIVDYNLQSKITLP
Position: 506-525
Source molecule (GenBank): P04958.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TT p20
Chemical type: Peptide from protein
Sequence: ILFLQWVRDIIDDFTNESSQ
Position: 610-629
Source molecule (GenBank): P04958.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TT p27
Chemical type: Peptide from protein
Sequence: ETTGVVLLLEYIPEITLPVI
Position: 666-685
Source molecule (GenBank): P04958.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Clara Guerra Duarte; Larissa Magalhães Alvarenga; Camila Dias-Lopes; Ricardo Andrés Machado-de-Avila; Christophe Nguyen; Frank Molina; Claude Granier; Carlos Chávez-Olórtegui. "In vivo protection against Tityus serrulatus scorpion venom by antibodies raised against a discontinuous synthetic epitope." Vaccine (2010).

Epitope: GREGYPADGGKIWTSETN
Chemical type: Peptide, no natural source
Sequence: GREGYPADGGKIWTSETN
Assay category: BCell
Result: Positive
Host: F adult
Reference: Yue Chen; Yuxian Pan; Yonghui Guo; Liwen Qiu; Xixia Ding; Xiaoyan Che. "Comprehensive mapping of immunodominant and conserved serotype- and group-specific B-cell epitopes of nonstructural protein 1 from dengue virus type 1." Virology (2010).

Epitope: DENV-1 NS1 peptide 2
Chemical type: Peptide from protein
Sequence: RELKCGSGIFVTNEV
Position: 47-61
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 2
Chemical type: Peptide from protein
Sequence: RELKCGSGIFVTNEV
Position: 47-61
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 2
Chemical type: Peptide from protein
Sequence: RELKCGSGIFVTNEV
Position: 47-61
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 2
Chemical type: Peptide from protein
Sequence: RELKCGSGIFVTNEV
Position: 47-61
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 29
Chemical type: Peptide from protein
Sequence: EGTTVVVDEHCGNRG
Position: 317-331
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 29
Chemical type: Peptide from protein
Sequence: EGTTVVVDEHCGNRG
Position: 317-331
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 29
Chemical type: Peptide from protein
Sequence: EGTTVVVDEHCGNRG
Position: 317-331
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks

Epitope: DENV-1 NS1 peptide 29
Chemical type: Peptide from protein
Sequence: EGTTVVVDEHCGNRG
Position: 317-331
Source molecule (GenBank): CAA49193.1
Assay category: BCell
Result: Negative
Host: M 4-6 weeks
Reference: N I Carlin; M A Gidney; A A Lindberg; D R Bundle. "Characterization of Shigella flexneri-specific murine monoclonal antibodies by chemically defined glycoconjugates." Journal of immunology (Baltimore, Md. : 1950) (1986).

Epitope: abcdabcdab
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: abcdabcdab
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 12-16 weeks

Epitope: abcdabcdab
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 12-16 weeks

Epitope: abcdabcdab
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: F 12-16 weeks

Epitope: abcdabcdab
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: abcdabcdab
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Reference: B Svenungsson; A A Lindberg. "Synthetic disaccharide-protein antigens for production of specific 04 and 09 antisera for immunofluorescence diagnosis of salmonella." Medical microbiology and immunology (1977).

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M

Epitope: TM
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Host: M
Reference: M J Gomez; B Maras; A Barca; R La Valle; D Barra; A Cassone. "Biochemical and immunological characterization of MP65, a major mannoprotein antigen of the opportunistic human pathogen Candida albicans." Infection and immunity (2000).

Epitope: T1b
Chemical type: Peptide from protein
Sequence: SSITSGIESLAEAVK
Position: 190-204
Source molecule (GenBank): CAC19886.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: T2b
Chemical type: Peptide from protein
Sequence: IASEIAQLSGFNVIR
Position: 146-160
Source molecule (GenBank): CAC19886.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: H Kobayashi; H Oyamada; N Iwadate; H Suzuki; H Mitobe; K Takahashi; N Shibata; S Suzuki; Y Okawa. "Structural and immunochemical characterization of beta-1,2-linked mannobiosyl phosphate residue in the cell wall mannan of Candida glabrata." Archives of microbiology (1998).

Epitope: beta-D-Man-(1–2)-alpha-D-Man(1–2)-alpha-D-Man-(1–2)-D-Man
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Reference: Michael L Freeman; Kathleen G Lanzer; Tres Cookenham; Bjoern Peters; John Sidney; Ting-Ting Wu; Ren Sun; David L Woodland; Alessandro Sette; Marcia A Blackman. "Two kinetic patterns of epitope-specific CD8 T-cell responses following murine gammaherpesvirus 68 infection." Journal of virology (2010).

Epitope: ORF21 586–595
Chemical type: Peptide from protein
Sequence: FCYELSKPHM
Position: 586-595
Source molecule (GenBank): CAA63755.1
Assay category: TCell
Result: Positive
Host: F 6-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ORF21 586–595
Chemical type: Peptide from protein
Sequence: FCYELSKPHM
Position: 586-595
Source molecule (GenBank): CAA63755.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 6323.0

Epitope: ORF60 227–234
Chemical type: Peptide from protein
Sequence: VEYSFIAA
Position: 227-234
Source molecule (GenBank): NP_044898.1
Assay category: TCell
Result: Positive
Host: F 6-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ORF60 227–234
Chemical type: Peptide from protein
Sequence: VEYSFIAA
Position: 227-234
Source molecule (GenBank): NP_044898.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 671.0

Epitope: ORF7 83–92
Chemical type: Peptide from protein
Sequence: LSHENTYDHV
Position: 83-92
Source molecule (GenBank): AAB66386.1
Assay category: TCell
Result: Positive
Host: F 6-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ORF7 83–92
Chemical type: Peptide from protein
Sequence: LSHENTYDHV
Position: 83-92
Source molecule (GenBank): AAB66386.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 930.0

Epitope: ORF66 20–28
Chemical type: Peptide from protein
Sequence: RSFCIYGHL
Position: 20-28
Source molecule (GenBank): AAF19330.1
Assay category: TCell
Result: Positive
Host: F 6-12 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ORF66 20–28
Chemical type: Peptide from protein
Sequence: RSFCIYGHL
Position: 20-28
Source molecule (GenBank): AAF19330.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 75.0
Reference: D A Thorley-Lawson; E S Israelsohn. "Generation of specific cytotoxic T cells with a fragment of the Epstein-Barr virus-encoded p63/latent membrane protein." Proceedings of the National Academy of Sciences of the United States of America (1987).

Epitope: LMP 98-107
Chemical type: Peptide from protein
Sequence: WNLHGQALFL
Position: 98-107
Source molecule (GenBank): Q777A4
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: T P Hopp. "Immunogenicity of a synthetic HBsAg peptide: enhancement by conjugation to a fatty acid carrier." Molecular immunology (1984).

Epitope: HBsAg (140-146)
Chemical type: Peptide from protein
Sequence: TKPTDGN
Position: 140-146
Source molecule (GenBank): BAF44879.1
Assay category: BCell
Result: Positive
Reference: Chunchen Wu; Xiaoyong Zhang; Yongjun Tian; Jianhua Song; Dongliang Yang; Michael Roggendorf; Mengji Lu; Xinwen Chen. "Biological significance of amino acid substitutions in hepatitis B surface antigen (HBsAg) for glycosylation, secretion, antigenicity and immunogenicity of HBsAg and hepatitis B virus replication." The Journal of general virology (2010).

Epitope: HBsAg residues
Chemical type: Discontinuous protein residues
Discontinuous residues: K122, T123, A159, K160
Source molecule (GenBank): AAW65561.1
Assay category: BCell
Result: Positive
Reference: Michael J Fuller; Naglaa H Shoukry; Toshifumi Gushima; David G Bowen; Benoit Callendret; Katherine J Campbell; Dana L Hasselschwert; Austin L Hughes; Christopher M Walker. "Selection-driven immune escape is not a significant factor in the failure of CD4 T cell responses in persistent hepatitis C virus infection." Hepatology (Baltimore, Md.) (2010).

Epitope: HCV NS3<sub>1376</sub> M2
Chemical type: Peptide from protein
Sequence: YGKAIPLAVI
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: liver
Culture conditions: Cell Line / Clone

Epitope: HCV NS3<sub>1376</sub> M2
Chemical type: Peptide from protein
Sequence: YGKAIPLAVI
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: liver
Culture conditions: Cell Line / Clone