LiteFold/IEDB huggingface dataset:
Reference: N S Patil; F C Hall; S Drover; D R Spurrell; E Bos; A P Cope; G Sonderstrup; E D Mellins. "Autoantigenic HCgp39 epitopes are presented by the HLA-DM-dependent presentation pathway in human B cells." Journal of immunology (Baltimore, Md. : 1950) (2001).

Epitope: HCgp39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: HCgp39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: L K Myers; K Terato; J M Seyer; J M Stuart; A H Kang. "Characterization of a tolerogenic T cell epitope of type II collagen and its relevance to collagen-induced arthritis." Journal of immunology (Baltimore, Md. : 1950) (1992).

Epitope: Peptide 2
Chemical type: Peptide, no natural source
Sequence: PTGALGAKGQTGELGIAGFKGEQGAK
Assay category: TCell
Result: Positive-Low
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 7
Chemical type: Peptide, no natural source
Sequence: PTGPLGPKGQTGELGIPGFKDEQGPK
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Peptide 13
Chemical type: Peptide, no natural source
Sequence: PTGPPGPKGQTGELGIAGFKGEQGPK
Assay category: TCell
Result: Positive
Host:  neonate

Epitope: Peptide 15
Chemical type: Peptide, no natural source
Sequence: PTGPLGPKGNTGELGIAGFKGEQGPK
Assay category: TCell
Result: Positive
Host:  neonate

Epitope: Peptide 20
Chemical type: Peptide, no natural source
Sequence: PTGPLGPKGQTGELGIAGNKGEQGPK
Assay category: TCell
Result: Negative
Host:  neonate
Reference: E Zanelli; C J Krco; J M Baisch; S Cheng; C S David. "Immune response of HLA-DQ8 transgenic mice to peptides from the third hypervariable region of HLA-DRB1 correlates with predisposition to rheumatoid arthritis." Proceedings of the National Academy of Sciences of the United States of America (1996).

Epitope: DRB1 allele 0402 HV3 region
Chemical type: Peptide from protein
Sequence: KDILEDERAAVDTYC
Position: 65-79
Source molecule (GenBank): Q30112
Assay category: TCell
Result: Positive-High
MHC allele types: 105
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: DRB1 allele 1103 HV3 region
Chemical type: Peptide from protein
Sequence: KDFLEDERAAVDTYC
Position: 60-74
Source molecule (GenBank): CAM34703.1
Assay category: TCell
Result: Positive-High
MHC allele types: 105
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: DRB1 allele 1303 HV3 region
Chemical type: Peptide from protein
Sequence: KDILEDKRAAVDTYC
Position: 60-74
Source molecule (GenBank): CAZ66451.1
Assay category: TCell
Result: Positive
MHC allele types: 105
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: DRB1 allele 0701 HV3 region
Chemical type: Peptide from protein
Sequence: KDILEDRRGQVDTVC
Position: 94-108
Source molecule (GenBank): P13761.1
Assay category: TCell
Result: Negative
MHC allele types: 105
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: H Tiwana; C Wilson; A Alvarez; R Abuknesha; S Bansal; A Ebringer. "Cross-reactivity between the rheumatoid arthritis-associated motif EQKRAA and structurally related sequences found in Proteus mirabilis." Infection and immunity (1999).

Epitope: EDERAA HLA-DRB1*0402 65-79
Chemical type: Peptide from protein
Sequence: KDILEDERAAVDTYC
Position: 65-79
Source molecule (GenBank): CAA46165.1
Assay category: BCell
Result: Positive-Low

Epitope: EDERAA HLA-DRB1*0402 65-79
Chemical type: Peptide from protein
Sequence: KDILEDERAAVDTYC
Position: 65-79
Source molecule (GenBank): CAA46165.1
Assay category: BCell
Result: Positive-Low

Epitope: EDERAA HLA-DRB1*0402 65-79
Chemical type: Peptide from protein
Sequence: KDILEDERAAVDTYC
Position: 65-79
Source molecule (GenBank): CAA46165.1
Assay category: BCell
Result: Positive
Reference: Edward F Rosloniec; Karen B Whittington; Xiaowen He; John M Stuart; Andrew H Kang. "Collagen-induced arthritis mediated by HLA-DR1 (*0101) and HLA-DR4 (*0401)." The American journal of the medical sciences (2004).

Epitope: hCII(265–279)
Chemical type: Peptide from protein
Sequence: GEQGPKGEDGPAGPQ
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: hCII(265–279)
Chemical type: Peptide from protein
Sequence: GEQGPKGEDGPAGPQ
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: hCII(265–279)
Chemical type: Peptide from protein
Sequence: GEQGPKGEDGPAGPQ
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: I260A
Chemical type: Peptide, no natural source
Sequence: GAAGFKGEQGPKGEP
Assay category: MhcBinding
Result: Positive

Epitope: I260A
Chemical type: Peptide, no natural source
Sequence: GAAGFKGEQGPKGEP
Assay category: MhcBinding
Result: Positive

Epitope: K264A
Chemical type: Peptide, no natural source
Sequence: GIAGFAGEQGPKGEP
Assay category: MhcBinding
Result: Negative

Epitope: K264A
Chemical type: Peptide, no natural source
Sequence: GIAGFAGEQGPKGEP
Assay category: MhcBinding
Result: Negative

Epitope: G265A
Chemical type: Peptide, no natural source
Sequence: GIAGFKAEQGPKGEP
Assay category: MhcBinding
Result: Positive-High

Epitope: G265A
Chemical type: Peptide, no natural source
Sequence: GIAGFKAEQGPKGEP
Assay category: MhcBinding
Result: Positive-High

Epitope: P273A
Chemical type: Peptide, no natural source
Sequence: GIAGFKGEQGPKGEA
Assay category: MhcBinding
Result: Positive-High

Epitope: P273A
Chemical type: Peptide, no natural source
Sequence: GIAGFKGEQGPKGEA
Assay category: MhcBinding
Result: Positive-High
Reference: B Y Diab; N C Lambert; F E L'Faqihi; P Loubet-Lescoulié; C de Préval; H Coppin. "Human collagen II peptide 256-271 preferentially binds to HLA-DR molecules associated with susceptibility to rheumatoid arthritis." Immunogenetics (1999).

Epitope: CII 181-197
Chemical type: Peptide from protein
Sequence: GARGPEGAQGPRGEPGT
Position: 312-328
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Positive

Epitope: CII 181-197
Chemical type: Peptide from protein
Sequence: GARGPEGAQGPRGEPGT
Position: 312-328
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Negative

Epitope: CII 181-197
Chemical type: Peptide from protein
Sequence: GARGPEGAQGPRGEPGT
Position: 312-328
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Negative

Epitope: CII 181-197
Chemical type: Peptide from protein
Sequence: GARGPEGAQGPRGEPGT
Position: 312-328
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Positive

Epitope: CII 128-144
Chemical type: Peptide from protein
Sequence: LPGERGRTGPAGAAGAR
Position: 259-275
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Negative

Epitope: CII 128-144
Chemical type: Peptide from protein
Sequence: LPGERGRTGPAGAAGAR
Position: 259-275
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Negative

Epitope: CII 189-204
Chemical type: Peptide from protein
Sequence: QGPRGEPGTPGSPGPA
Position: 320-335
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Negative

Epitope: CII 189-204
Chemical type: Peptide from protein
Sequence: QGPRGEPGTPGSPGPA
Position: 320-335
Source molecule (GenBank): NP_149162.2
Assay category: MhcBinding
Result: Negative

Epitope: CII 226-242
Chemical type: Peptide from protein
Sequence: GIAGAPGFPGPRGPPDP
Position: 357-373
Assay category: MhcBinding
Result: Negative

Epitope: CII 226-242
Chemical type: Peptide from protein
Sequence: GIAGAPGFPGPRGPPDP
Position: 357-373
Assay category: MhcBinding
Result: Negative
Reference: S Salvat; I Auger; L Rochelle; A Begovich; L Geburher; A Sette; J Roudier. "Tolerance to a self-peptide from the third hypervariable region of HLA DRB1*0401 in rheumatoid arthritis patients and normal subjects." Journal of immunology (Baltimore, Md. : 1950) (1994).

Epitope: DRB1*0402 HV3 Peptide
Chemical type: Peptide from protein
Sequence: KDILEDERAAVDTYC
Position: 65-79
Source molecule (GenBank): CAA46165.1
Assay category: TCell
Result: Positive
MHC allele types: 63 436
Cell type: mononuclear cell
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: E C Andersson; B E Hansen; H Jacobsen; L S Madsen; C B Andersen; J Engberg; J B Rothbard; G S McDevitt; V Malmström; R Holmdahl; A Svejgaard; L Fugger. "Definition of MHC and T cell receptor contacts in the HLA-DR4restricted immunodominant epitope in type II collagen and characterization of collagen-induced arthritis in HLA-DR4 and human CD4 transgenic mice." Proceedings of the National Academy of Sciences of the United States of America (1998).

Epitope: CII 266A
Chemical type: Peptide, no natural source
Sequence: AGFKGAQGPKGEP
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1249.0

Epitope: CII 269A
Chemical type: Peptide, no natural source
Sequence: AGFKGEQGAKGEP
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 781.0
Reference: N A Kefalides; N Ohno; C B Wilson; H Fillit; J Zabriski; J Rosenbloom. "Identification of antigenic epitopes in type IV collagen by use of synthetic peptides." Kidney international (1993).

Epitope: Collagen α1(IV) 195-217
Chemical type: Peptide from protein
Sequence: CTIERSEMFKPTPSTLKAGELRT
Assay category: BCell
Result: Positive

Epitope: Collagen α1(IV) 195-217
Chemical type: Peptide from protein
Sequence: CTIERSEMFKPTPSTLKAGELRT
Assay category: BCell
Result: Positive

Epitope: Collagen α3(IV) 72-89
Chemical type: Peptide from protein
Sequence: DVCNFASRNDYSYWLSTP
Position: 1509-1526
Source molecule (GenBank): XP_618164.4
Assay category: BCell
Result: Positive

Epitope: Collagen α3(IV) 72-89
Chemical type: Peptide from protein
Sequence: DVCNFASRNDYSYWLSTP
Position: 1509-1526
Source molecule (GenBank): XP_618164.4
Assay category: BCell
Result: Positive
Reference: Yoshihiko Sakurai; Bo Tang; Edward F Rosloniec; John M Stuart; Andrew H Kang; Linda K Myers. "Molecular characterization of an arthritogenic collagen peptide interacting with I-Ar." Immunology (2006).

Epitope: 447 analog to CII(452-457)
Chemical type: Peptide, no natural source
Sequence: GPPGPVGPAGERGEQG
Assay category: MhcBinding
Result: Negative
Reference: Frances C Hall; Kevin C Visconti; Regina-Celeste Ahmad; Sarah L Parry; André M M Miltenburg; Harden M McConnell; Elizabeth D Mellins; Grete Sønderstrup. "Cytokines elicited by T cell epitopes from a synovial autoantigen: altered peptide ligands can reduce interferon-gamma and interleukin-10 production." Arthritis and rheumatism (2003).

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive-Low
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Negative
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive-High
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: HC gp-39 (322-337)
Chemical type: Peptide from protein
Sequence: GNQWVGYDDQESVKSK
Position: 322-337
Source molecule (GenBank): P36222.2
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 15840.0
Reference: A M al-Dughaym; R C Matthews; J P Burnie. "Epitope mapping human heat shock protein 90 with sera from infected patients." FEMS immunology and medical microbiology (1994).

Epitope: human HSP 90 (549)
Chemical type: Peptide from protein
Sequence: GLELPE
Position: 540-545
Source molecule (GenBank): P08238.4
Assay category: BCell
Result: Positive

Epitope: human HSP 90 (549)
Chemical type: Peptide from protein
Sequence: GLELPE
Position: 540-545
Source molecule (GenBank): P08238.4
Assay category: BCell
Result: Negative

Epitope: human HSP 90 (549)
Chemical type: Peptide from protein
Sequence: GLELPE
Position: 540-545
Source molecule (GenBank): P08238.4
Assay category: BCell
Result: Positive

Epitope: human HSP 90 (549)
Chemical type: Peptide from protein
Sequence: GLELPE
Position: 540-545
Source molecule (GenBank): P08238.4
Assay category: BCell
Result: Positive

Epitope: human HSP 90 (549)
Chemical type: Peptide from protein
Sequence: GLELPE
Position: 540-545
Source molecule (GenBank): P08238.4
Assay category: BCell
Result: Negative
Reference: C Ma; P E Whiteley; P M Cameron; D C Freed; A Pressey; S L Chen; B Garni-Wagner; C Fang; D M Zaller; L S Wicker; J S Blum. "Role of APC in the selection of immunodominant T cell epitopes." Journal of immunology (Baltimore, Md. : 1950) (1999).

Epitope: Ig k 188–202
Chemical type: Peptide from protein
Sequence: KHKVYACEVTHQGLS
Position: 188-202
Source molecule (GenBank): 0709220A
Assay category: MhcBinding
Result: Positive

Epitope: Ig k 188–203
Chemical type: Peptide from protein
Sequence: KHKVYACEVTHQGLSS
Position: 188-203
Source molecule (GenBank): 0709220A
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: Ig k 188–203
Chemical type: Peptide from protein
Sequence: KHKVYACEVTHQGLSS
Position: 188-203
Source molecule (GenBank): 0709220A
Assay category: TCell
Result: Positive
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Ig k 188–203
Chemical type: Peptide from protein
Sequence: KHKVYACEVTHQGLSS
Position: 188-203
Source molecule (GenBank): 0709220A
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: Ig k 188–203
Chemical type: Peptide from protein
Sequence: KHKVYACEVTHQGLSS
Position: 188-203
Source molecule (GenBank): 0709220A
Assay category: TCell
Result: Positive
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: Ig k 188–203
Chemical type: Peptide from protein
Sequence: KHKVYACEVTHQGLSS
Position: 188-203
Source molecule (GenBank): 0709220A
Assay category: MhcBinding
Result: Positive
Reference: L K Myers; S W Cooper; K Terato; J M Seyer; J M Stuart; A H Kang. "Identification and characterization of a tolerogenic T cell determinant within residues 181-209 of chick type II collagen." Clinical immunology and immunopathology (1995).

Epitope: Murine CII 181-209
Chemical type: Peptide from protein
Sequence: GARGPEGAQGSRGEPGNPGSPGPAGASGN
Position: 381-409
Source molecule (GenBank): P28481.2
Assay category: TCell
Result: Negative
Host:  neonate
Reference: N Tuaillon; T Martin; A M Knapp; J L Pasquali; S Muller. "Double reactivity of monoclonal and polyclonal rheumatoid factors for IgG and histones: mapping of binding sites by means of histone synthetic peptides and anti-Id antibodies." Journal of autoimmunity (1992).

Epitope: H2A (1-20)
Chemical type: Peptide from protein
Sequence: MSGRGKQGGKARAKAKTRSS
Position: 1-20
Source molecule (GenBank): P0C0S9.2
Assay category: BCell
Result: Positive

Epitope: H3 (111-130)
Chemical type: Peptide from protein
Sequence: AIHAKRVTIMPKDIQLARRI
Position: 112-131
Source molecule (GenBank): P68432.2
Assay category: BCell
Result: Negative
Reference: Jason C Huang; Mikael Vestberg; Alfredo Minguela; Rikard Holmdahl; E Sally Ward. "Analysis of autoreactive T cells associated with murine collagen-induced arthritis using peptide-MHC multimers." International immunology (2004).

Epitope: mCII256-270
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGDQGPK
Position: 456-470
Source molecule (GenBank): P28481.2
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: mCII256-270
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGDQGPK
Position: 456-470
Source molecule (GenBank): P28481.2
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: mCII256-270
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGDQGPK
Position: 456-470
Source molecule (GenBank): P28481.2
Assay category: TCell
Result: Positive
Host: M 8-12 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: mCII256-270
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGDQGPK
Position: 456-470
Source molecule (GenBank): P28481.2
Assay category: MhcBinding
Result: Negative
Reference: V R Bonagura; S E Artandi; A Davidson; I Randen; N Agostino; K Thompson; J B Natvig; S L Morrison. "Mapping studies reveal unique epitopes on IgG recognized by rheumatoid arthritis-derived monoclonal rheumatoid factors." Journal of immunology (Baltimore, Md. : 1950) (1993).

Epitope: His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: Ile 253, His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: I133, H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: Ile 253, His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: I133, H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: Ile 253, His 435
Chemical type: Discontinuous protein residues
Discontinuous residues: I133, H315
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: Ile 253
Chemical type: Discontinuous protein residues
Discontinuous residues: I133
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: Ile 253
Chemical type: Discontinuous protein residues
Discontinuous residues: I133
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive

Epitope: Ile 253
Chemical type: Discontinuous protein residues
Discontinuous residues: I133
Source molecule (GenBank): P01861.1
Assay category: BCell
Result: Positive
Reference: Alexei von Delwig; Daniel M Altmann; Fraser G Charlton; Norman McKie; John D Isaacs; Rikard Holmdahl; John H Robinson. "T cell responses to a non-glycosylated epitope predominate in type II collagen-immunised HLA-DRB1*0101 transgenic mice." Annals of the rheumatic diseases (2007).

Epitope: CII<sub>259-273</sub>
Chemical type: Peptide from protein
Sequence: GIAGFKGEQGPKGET
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: CII<sub>259-273</sub>
Chemical type: Peptide from protein
Sequence: GIAGFKGEQGPKGET
Assay category: TCell
Result: Positive-Low
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: CII<sub>259-273</sub>
Chemical type: Peptide from protein
Sequence: GIAGFKGEQGPKGET
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: spleen
Culture conditions: Cell Line / Clone (Hybridoma)
Reference: Ida E Andersson; Balik Dzhambazov; Rikard Holmdahl; Anna Linusson; Jan Kihlberg. "Probing molecular interactions within class II MHC Aq/glycopeptide/T-cell receptor complexes associated with collagen-induced arthritis." Journal of medicinal chemistry (2007).

Epitope: CII (260-267)
Chemical type: Peptide from protein
Sequence: IAGFKGEQ
Position: 392-399
Source molecule (GenBank): P05539.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: CII (260-267)
Chemical type: Peptide from protein
Sequence: IAGFKGEQ
Position: 392-399
Source molecule (GenBank): P05539.2
Assay category: MhcBinding
Result: Positive
Reference: E Uchio; M Stanford; A Hasan; S Satoh; S Ohno; T Shinnick; R van der Zee; Y Mizushima; T Lehner. "HSP-derived peptides inducing uveitis and IgG and IgA antibodies." Experimental eye research (1998).

Epitope: 65 kD HSP 154-172
Chemical type: Peptide from protein
Sequence: QSIGDLIAEAMDKVGNEGV
Position: 93-111
Source molecule (GenBank): AAQ64500.1
Assay category: BCell
Result: Positive-Low
Host: M
Reference: P Kjellén; U Brunsberg; J Broddefalk; B Hansen; M Vestberg; I Ivarsson; A Engström; A Svejgaard; J Kihlberg; L Fugger; R Holmdahl. "The structural basis of MHC control of collagen-induced arthritis; binding of the immunodominant type II collagen 256-270 glycopeptide to H-2Aq and H-2Ap molecules." European journal of immunology (1998).

Epitope: CII 256-270 E266D
Chemical type: Peptide, no natural source
Sequence: GEPGIAGFKGDQGPK
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 75000.0
Reference: Hisakata Yamada; Balik Dzhambazov; Robert Bockermann; Thomas Blom; Rikard Holmdahl. "A transient post-translationally modified form of cartilage type II collagen is ignored by self-reactive T cells." Journal of immunology (Baltimore, Md. : 1950) (2004).

Epitope: rat CII (256-270) Gal-HK264
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGEQGPK
Position: 388-402
Source molecule (GenBank): NP_037061.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: rat CII (256-270) Gal-HK264
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGEQGPK
Position: 388-402
Source molecule (GenBank): NP_037061.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)

Epitope: rat CII (256-270) Gal-HK264
Chemical type: Peptide from protein
Sequence: GEPGIAGFKGEQGPK
Position: 388-402
Source molecule (GenBank): NP_037061.1
Assay category: TCell
Result: Positive
Host: M 
Cell type: T cell hybridoma
Tissue: lymph node
Culture conditions: Cell Line / Clone (Hybridoma)