LiteFold/IEDB huggingface dataset:
Reference: Yongzheng Li; Xiuwen Wang; Junyan Jin; Zhenglai Ma; Yan Liu; Xin Zhang; Bin Su. "T-cell responses to SARS-CoV-2 Omicron spike epitopes with mutations after the third booster dose of an inactivated vaccine." Journal of medical virology (2022).

Epitope: SARS S peptide G339D omicron
Chemical type: Peptide from protein
Sequence: IVRFPNITNLCPFDE
Position: 323-337
Source molecule (GenBank): UNJ84372.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide G339D omicron
Chemical type: Peptide from protein
Sequence: IVRFPNITNLCPFDE
Position: 323-337
Source molecule (GenBank): UNJ84372.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide G339D omicron
Chemical type: Peptide from protein
Sequence: IVRFPNITNLCPFDE
Position: 323-337
Source molecule (GenBank): UNJ84372.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide N440K ancestral
Chemical type: Peptide from protein
Sequence: GCVIAWNSNNLDSKV
Position: 431-445
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide N440K ancestral
Chemical type: Peptide from protein
Sequence: GCVIAWNSNNLDSKV
Position: 431-445
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide N440K ancestral
Chemical type: Peptide from protein
Sequence: GCVIAWNSNNLDSKV
Position: 431-445
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide S477N T478K E484A omicron
Chemical type: Peptide from protein
Sequence: IYQAGNKPCNGVAGFNCY
Position: 469-486
Source molecule (GenBank): UJK14488.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SARS S peptide Q493K G496S Q498R N501Y Y505H omicron
Chemical type: Peptide from protein
Sequence: LKSYSFRPTYGVGHQPYRV
Position: 489-507
Source molecule (GenBank): UMA71171.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Vladimir Roudko; Cansu Cimen Bozkus; Theofano Orfanelli; Christopher B McClain; Caitlin Carr; Timothy O'Donnell; Lauren Chakraborty; Robert Samstein; Kuan-Lin Huang; Stephanie V Blank; Benjamin Greenbaum; Nina Bhardwaj. "Shared Immunogenic Poly-Epitope Frameshift Mutations in Microsatellite Unstable Tumors." Cell (2020).

Epitope: 1.3
Chemical type: Peptide, no natural source
Sequence: LCGFWQICHIKKHFQ
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Jaxaira Maggi; Montserrat Carrascal; Lilian Soto; Oscar Neira; María C Cuéllar; Octavio Aravena; Eddie A James; Joaquin Abian; Dolores Jaraquemada; Diego Catalan; Juan C Aguillón. "Isolation of HLA-DR-naturally presented peptides identifies T-cell epitopes for rheumatoid arthritis." Annals of the rheumatic diseases (2022).

Epitope: Elongation factor 1-alpha 1
Chemical type: Peptide from protein
Sequence: AAGFTAQVIILNHPGQISAG
Position: 337-356
Source molecule (GenBank): P68104.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Ganglioside GM2 activator
Chemical type: Peptide from protein
Sequence: TTGNYRIESVLSSSG
Position: 164-178
Source molecule (GenBank): P17900.4
Assay category: MhcLigandElution
Result: Positive

Epitope: HSP 70-2
Chemical type: Peptide from protein
Sequence: EVISWLDANTLAEKD
Position: 576-590
Source molecule (GenBank): P0DMV8.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Moesin
Chemical type: Peptide from protein
Sequence: AELEFAIQPNTTGKQ
Position: 14-28
Source molecule (GenBank): P35241.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Moesin
Chemical type: Peptide from protein
Sequence: AELEFAIQPNTTGKQ
Position: 14-28
Source molecule (GenBank): P35241.1
Assay category: MhcLigandElution
Result: Positive

Epitope: Osteopontin
Chemical type: Peptide from protein
Sequence: GAYKAIPVAQDLNAP
Position: 200-214
Source molecule (GenBank): P10451.1
Assay category: MhcLigandElution
Result: Positive
Reference: Yongxue Lv; Shasha Li; Tingrui Zhang; Yazhou Zhu; Jia Tao; Jihui Yang; Liangliang Chang; Changyou Wu; Wei Zhao. "Identification of B-cell dominant epitopes in the recombinant protein P29 from Echinococcus granulosus." Immunity, inflammation and disease (2022).

Epitope: rEg.P29 136-150
Chemical type: Peptide from protein
Sequence: NFLNTTLSEAQKAKT
Position: 136-150
Source molecule (GenBank): XP_024351425.1
Assay category: BCell
Result: Negative
Reference: Timoteo Marchini; Sara Malchow; Lourdes Caceres; Abed Al Hadi El Rabih; Sophie Hansen; Timothy Mwinyella; Lisa Spiga; Sven Piepenburg; Hauke Horstmann; Tijani Olawale; Xiaowei Li; Lucia Sol Mitre; Mark Colin Gissler; Heiko Bugger; Andreas Zirlik; Timo Heidt; Ingo Hilgendorf; Peter Stachon; Constantin von Zur Muehlen; Christoph Bode; Dennis Wolf. "Circulating Autoantibodies Recognizing Immunodominant Epitopes From Human Apolipoprotein B Associate With Cardiometabolic Risk Factors, but Not With Atherosclerotic Disease." Frontiers in cardiovascular medicine (2022).

Epitope: Apolipoprotein B-100 2491-2505_Peptide 16
Chemical type: Peptide from protein
Sequence: LIINWLQEALSSASL
Position: 2491-2505
Source molecule (GenBank): P04114.2
Assay category: BCell
Result: Positive-Low

Epitope: Apolipoprotein B-100 2491-2505_Peptide 16
Chemical type: Peptide from protein
Sequence: LIINWLQEALSSASL
Position: 2491-2505
Source molecule (GenBank): P04114.2
Assay category: BCell
Result: Positive-Low

Epitope: Apolipoprotein B-100 461-475_Peptide 27
Chemical type: Peptide from protein
Sequence: QELLDIANYLMEQIQ
Position: 461-475
Source molecule (GenBank): P04114.2
Assay category: BCell
Result: Positive

Epitope: Apolipoprotein B-100 461-475_Peptide 27
Chemical type: Peptide from protein
Sequence: QELLDIANYLMEQIQ
Position: 461-475
Source molecule (GenBank): P04114.2
Assay category: BCell
Result: Positive-Low
Reference: Mei-Ling Yang; Sheryl Horstman; Renelle Gee; Perrin Guyer; TuKiet T Lam; Jean Kanyo; Ana L Perdigoto; Cate Speake; Carla J Greenbaum; Aïsha Callebaut; Lut Overbergh; Richard G Kibbey; Kevan C Herold; Eddie A James; Mark J Mamula. "Citrullination of glucokinase is linked to autoimmune diabetes." Nature communications (2022).

Epitope: Glucokinase 58-72
Chemical type: Peptide from protein
Sequence: LPTYVRSTPEGSEVG
Position: 58-72
Source molecule (GenBank): P35557.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 30900.0

Epitope: Glucokinase 192-206
Chemical type: Peptide from protein
Sequence: RGDFEMDVVAMVNDT
Position: 192-206
Source molecule (GenBank): P35557.1
Assay category: TCell
Result: Positive
Host:  30-57 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Glucokinase 192-206
Chemical type: Peptide from protein
Sequence: RGDFEMDVVAMVNDT
Position: 192-206
Source molecule (GenBank): P35557.1
Assay category: TCell
Result: Positive-Low
Host:  30-65 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Glucokinase 192-206
Chemical type: Peptide from protein
Sequence: RGDFEMDVVAMVNDT
Position: 192-206
Source molecule (GenBank): P35557.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 350.0

Epitope: Glucokinase 231-245
Chemical type: Peptide from protein
Sequence: NACYMEEMQNVELVE
Position: 231-245
Source molecule (GenBank): P35557.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 30.0

Epitope: Glucokinase 352-366
Chemical type: Peptide from protein
Sequence: LSTLGLRPSTTDCDI
Position: 352-366
Source molecule (GenBank): P35557.1
Assay category: MhcBinding
Result: Negative
Quantitative measurement: 50000.0

Epitope: Citrulline
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Citrulline
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Citrulline
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Citrulline
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Glucokinase 266-280 CIT
Chemical type: Peptide from protein
Sequence: LDEFLLEYDRLVDES
Position: 266-280
Source molecule (GenBank): P35557.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 9500.0
Reference: Katrien Pletinckx; Kirsty S Nicolson; Heather B Streeter; William J Sanderson; Evelien Schurgers; Lotta Jansson; David C Wraith. "Antigen-specific immunotherapy with apitopes suppresses generation of FVIII inhibitor antibodies in HLA-transgenic mice." Blood advances (2022).

Epitope: Factor VIII peptide PRCLT
Chemical type: Peptide from protein
Sequence: PRCLTRYYSSFVNME
Position: 545-559
Source molecule (GenBank): P00451.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone

Epitope: Factor VIII peptide PRCLT
Chemical type: Peptide from protein
Sequence: PRCLTRYYSSFVNME
Position: 545-559
Source molecule (GenBank): P00451.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone

Epitope: Factor VIII peptide PRCLT
Chemical type: Peptide from protein
Sequence: PRCLTRYYSSFVNME
Position: 545-559
Source molecule (GenBank): P00451.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Cell Line / Clone

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: KKGPRCLTRYYSSFVNMEGKK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: KKGPRCLTRYYSSFVNMEGKK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: KKGPRCLTRYYSSFVNMEGKK
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 32210.0

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: KKGPRCLTRYYSSFVNMEGKK
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 400.0

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: KKGPRCLTRYYSSFVNMEGKK
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1280.0

Epitope: P1
Chemical type: Peptide, no natural source
Sequence: KKGPRCLTRYYSSFVNMEGKK
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 60.0
Reference: Hirotsugu Uemura; Kiyohide Fujimoto; Takashi Mine; Shigeya Uejima; Marco A de Velasco; Yoshihiko Hirao; Nobukazu Komatsu; Akira Yamada; Kyogo Itoh. "Immunological evaluation of personalized peptide vaccination monotherapy in patients with castration-resistant prostate cancer." Cancer science (2010).

Epitope: SART3-109
Chemical type: Peptide from protein
Sequence: VYDYNCHVDL
Position: 109-118
Source molecule (GenBank): Q15020.1
Assay category: BCell
Result: Positive
Host: M 48-80 years

Epitope: SART3-109
Chemical type: Peptide from protein
Sequence: VYDYNCHVDL
Position: 109-118
Source molecule (GenBank): Q15020.1
Assay category: BCell
Result: Positive
Host: M 48-80 years

Epitope: SART3-109
Chemical type: Peptide from protein
Sequence: VYDYNCHVDL
Position: 109-118
Source molecule (GenBank): Q15020.1
Assay category: TCell
Result: Positive
Host: M 48-80 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SART3-109
Chemical type: Peptide from protein
Sequence: VYDYNCHVDL
Position: 109-118
Source molecule (GenBank): Q15020.1
Assay category: TCell
Result: Positive
Host: M 48-80 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SART3-109
Chemical type: Peptide from protein
Sequence: VYDYNCHVDL
Position: 109-118
Source molecule (GenBank): Q15020.1
Assay category: TCell
Result: Positive
Host: M 48-80 years

Epitope: WHSC2-141
Chemical type: Peptide from protein
Sequence: ILGELREKV
Position: 120-128
Source molecule (GenBank): Q9H3P2.3
Assay category: BCell
Result: Positive-Low
Host: M 48-80 years

Epitope: WHSC2-141
Chemical type: Peptide from protein
Sequence: ILGELREKV
Position: 120-128
Source molecule (GenBank): Q9H3P2.3
Assay category: BCell
Result: Positive-Low
Host: M 48-80 years

Epitope: WHSC2-141
Chemical type: Peptide from protein
Sequence: ILGELREKV
Position: 120-128
Source molecule (GenBank): Q9H3P2.3
Assay category: TCell
Result: Negative
Host: M 48-80 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: WHSC2-141
Chemical type: Peptide from protein
Sequence: ILGELREKV
Position: 120-128
Source molecule (GenBank): Q9H3P2.3
Assay category: TCell
Result: Positive
Host: M 48-80 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: WHSC2-141
Chemical type: Peptide from protein
Sequence: ILGELREKV
Position: 120-128
Source molecule (GenBank): Q9H3P2.3
Assay category: TCell
Result: Negative
Host: M 48-80 years
Reference: Katarzyna Niespodziana; Clarissa R Cabauatan; Petra Pazderova; Phyllis C Vacal; Judith Wortmann; Walter Keller; Peter Errhalt; Rudolf Valenta. "Identification of Epitopes on Rhinovirus 89 Capsid Proteins Capable of Inducing Neutralizing Antibodies." International journal of molecular sciences (2022).

Epitope: RV89 VP2-p9
Chemical type: Peptide from protein
Sequence: LLIVAAIPEHQLASATSGNV
Position: 190-209
Source molecule (GenBank): P07210.3
Assay category: BCell
Result: Negative
Reference: Yan Ding; Zining Zhou; Xingyu Li; Chen Zhao; Xiaoxiao Jin; Xiaotao Liu; Yandan Wu; Xueyin Mei; Jian Li; Jie Qiu; Chuanlai Shen. "Screening and Identification of HBV Epitopes Restricted by Multiple Prevalent HLA-A Allotypes." Frontiers in immunology (2022).

Epitope: P20
Chemical type: Peptide from protein
Sequence: LFILLLCLI
Position: 258-266
Source molecule (GenBank): P31868.2
Assay category: TCell
Result: Positive-Low
MHC allele types: 215 213
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P42
Chemical type: Peptide from protein
Sequence: STLPETTVVR
Position: 141-150
Source molecule (GenBank): Q76R61.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P42
Chemical type: Peptide from protein
Sequence: STLPETTVVR
Position: 141-150
Source molecule (GenBank): Q76R61.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P42
Chemical type: Peptide from protein
Sequence: STLPETTVVR
Position: 141-150
Source molecule (GenBank): Q76R61.1
Assay category: TCell
Result: Positive
MHC allele types: 213 604
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: P42
Chemical type: Peptide from protein
Sequence: STLPETTVVR
Position: 141-150
Source molecule (GenBank): Q76R61.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: P42
Chemical type: Peptide from protein
Sequence: STLPETTVVR
Position: 141-150
Source molecule (GenBank): Q76R61.1
Assay category: TCell
Result: Positive-Low
MHC allele types: 213 205 143 3462 223
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P44
Chemical type: Peptide from protein
Sequence: YVSLMLLYK
Position: 486-494
Source molecule (GenBank): Q9IBI4.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P60
Chemical type: Peptide from protein
Sequence: RTPSPRRRR
Position: 159-167
Source molecule (GenBank): Q76R61.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P64
Chemical type: Peptide from protein
Sequence: MVFVLGGCR
Position: 130-138
Source molecule (GenBank): P0C686.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P69
Chemical type: Peptide from protein
Sequence: RVCCQLDPA
Position: 4-12
Source molecule (GenBank): P0C686.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P121
Chemical type: Peptide from protein
Sequence: STTDLEAYF
Position: 104-112
Source molecule (GenBank): Q69027.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Monique R Bennett; Jinhui Dong; Robin G Bombardi; Cinque Soto; Helen M Parrington; Rachel S Nargi; Clara T Schoeder; Marcus B Nagel; Kevin L Schey; Jens Meiler; Eric P Skaar; James E Crowe. "Human  Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis." mBio (2019).

Epitope: Epitope of STAU-229 Fab on IsdB NEAT2 domain
Chemical type: Peptide from protein
Sequence: MTDLQDTKY
Position: 342-350
Source molecule (GenBank): Q2FZF0.1
Assay category: BCell
Result: Positive

Epitope: Epitope of STAU-229 Fab on IsdB NEAT2 domain
Chemical type: Peptide from protein
Sequence: MTDLQDTKY
Position: 342-350
Source molecule (GenBank): Q2FZF0.1
Assay category: BCell
Result: Positive-Low

Epitope: Epitope of STAU-229 Fab on IsdB NEAT2 domain
Chemical type: Peptide from protein
Sequence: MTDLQDTKY
Position: 342-350
Source molecule (GenBank): Q2FZF0.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.3

Epitope: Epitope of STAU-229 Fab on IsdB NEAT2 domain
Chemical type: Peptide from protein
Sequence: MTDLQDTKY
Position: 342-350
Source molecule (GenBank): Q2FZF0.1
Assay category: BCell
Result: Positive
Reference: Jeremy Bigot; Ana I Lalanne; Francesca Lucibello; Paul Gueguen; Alexandre Houy; Stephane Dayot; Olivier Ganier; Jules Gilet; Jimena Tosello; Fariba Nemati; Gaelle Pierron; Joshua J Waterfall; Raymond Barnhill; Sophie Gardrat; Sophie Piperno-Neumann; Tatiana Popova; Vanessa Masson; Damarys Loew; Pascale Mariani; Nathalie Cassoux; Sebastian Amigorena; Manuel Rodrigues; Samar Alsafadi; Marc-Henri Stern; Olivier Lantz. "Splicing Patterns in -Mutated Uveal Melanoma Generate Shared Immunogenic Tumor-Specific Neoepitopes." Cancer discovery (2021).

Epitope: A2:12
Chemical type: Peptide, no natural source
Sequence: FLSRKLSSL
Assay category: TCell
Result: Positive
Host:  37-65 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A2:12
Chemical type: Peptide, no natural source
Sequence: FLSRKLSSL
Assay category: MhcBinding
Result: Positive

Epitope: A2:27
Chemical type: Peptide, no natural source
Sequence: RLFPISPET
Assay category: TCell
Result: Positive
Host:  37-65 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A2:27
Chemical type: Peptide, no natural source
Sequence: RLFPISPET
Assay category: MhcBinding
Result: Positive

Epitope: A2:28
Chemical type: Peptide, no natural source
Sequence: SLLPYVFVI
Assay category: TCell
Result: Positive
Host:  37-65 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A2:28
Chemical type: Peptide, no natural source
Sequence: SLLPYVFVI
Assay category: MhcBinding
Result: Positive

Epitope: A2:30
Chemical type: Peptide, no natural source
Sequence: VISSPLLAV
Assay category: MhcBinding
Result: Positive-Intermediate

Epitope: A2:42
Chemical type: Peptide, no natural source
Sequence: KLMGPEVQV
Assay category: TCell
Result: Positive
Host:  37-65 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: A2:42
Chemical type: Peptide, no natural source
Sequence: KLMGPEVQV
Assay category: MhcBinding
Result: Positive
Reference: Yang Liu; Baozeng Sun; Jiawei Wang; Hao Sun; Zhenhua Lu; Longyu Chen; Mingfu Lan; Jiahao Xu; Jingyu Pan; Jingqi Shi; Yuanjie Sun; Xiyang Zhang; Jing Wang; Dongbo Jiang; Kun Yang. "In silico analyses and experimental validation of the MHC class-I restricted epitopes of Ebolavirus GP." International immunology (2022).

Epitope: GP-195
Chemical type: Peptide from protein
Sequence: SSHPLREPV
Position: 195-203
Source molecule (GenBank): AAQ55048.1
Assay category: TCell
Result: Positive
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Jolene Su Yi Tan; Bernett Lee; Jackwee Lim; Dong Rui Ma; Jia Xin Goh; Suh Yee Goh; Muhammad Yaaseen Gulam; Ser Mei Koh; Weiling Wendy Lee; Lei Feng; Qing Wang; Yinxia Chao; Olaf Rötzschke; Eng King Tan. "Parkinson's Disease-Specific Autoantibodies against the Neuroprotective Co-Chaperone STIP1." Cells (2022).

Epitope: STIP1 peptide 44
Chemical type: Peptide from protein
Sequence: EDLPENKKQALKEKELGN
Position: 216-233
Source molecule (GenBank): P31948.1
Assay category: BCell
Result: Negative

Epitope: STIP1 peptide 44
Chemical type: Peptide from protein
Sequence: EDLPENKKQALKEKELGN
Position: 216-233
Source molecule (GenBank): P31948.1
Assay category: BCell
Result: Negative

Epitope: STIP1 peptide 44
Chemical type: Peptide from protein
Sequence: EDLPENKKQALKEKELGN
Position: 216-233
Source molecule (GenBank): P31948.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STIP1 peptide 44
Chemical type: Peptide from protein
Sequence: EDLPENKKQALKEKELGN
Position: 216-233
Source molecule (GenBank): P31948.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STIP1 peptide 50
Chemical type: Peptide from protein
Sequence: KHYDKAKELDPTNMTYIT
Position: 246-263
Source molecule (GenBank): P31948.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STIP1 peptide 50
Chemical type: Peptide from protein
Sequence: KHYDKAKELDPTNMTYIT
Position: 246-263
Source molecule (GenBank): P31948.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Kerry J Laing; Victoria L Campbell; Lichun Dong; David M Koelle. "HLA-B*57:01 Complexed to a CD8 T-Cell Epitope from the HSV-2 ICP22 Protein Binds NK and T Cells through KIR3DL1." Viruses (2022).

Epitope: IFNL2 (76–84)
Chemical type: Peptide from protein
Sequence: HSRLFPRTW
Position: 76-84
Source molecule (GenBank): Q8IZJ0.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Qichao Chen; Huan Wang; Liang Li; Shibang Guo; Zhankui Liu; Zizhe Hu; Chen Tan; Huanchun Chen; Xiangru Wang. "Characterization of a universal neutralizing monoclonal antibody against Glaesserella parasuis CdtB." Veterinary microbiology (2022).

Epitope: CdtB 84-103
Chemical type: Peptide from protein
Sequence: GVGFPIDEYVWNLGTRSRPN
Position: 84-103
Source molecule (GenBank): WP_160441602.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: CdtB 84-103
Chemical type: Peptide from protein
Sequence: GVGFPIDEYVWNLGTRSRPN
Position: 84-103
Source molecule (GenBank): WP_160441602.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: CdtB 84-103
Chemical type: Peptide from protein
Sequence: GVGFPIDEYVWNLGTRSRPN
Position: 84-103
Source molecule (GenBank): WP_160441602.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: CdtB 84-103
Chemical type: Peptide from protein
Sequence: GVGFPIDEYVWNLGTRSRPN
Position: 84-103
Source molecule (GenBank): WP_160441602.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks