LiteFold/IEDB huggingface dataset:
Reference: Leslie Hesnard; Catherine Thériault; Maxime Cahuzac; Chantal Durette; Krystel Vincent; Marie-Pierre Hardy; Joël Lanoix; Gabriel Ouellet Lavallée; Juliette Humeau; Pierre Thibault; Claude Perreault. "Immunogenicity of Non-Mutated Ovarian Cancer-Specific Antigens." Current oncology (Toronto, Ont.) (2024).

Epitope: SLIPTALSL
Chemical type: Peptide from protein
Sequence: SLIPTALSL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SLIPTALSL
Chemical type: Peptide from protein
Sequence: SLIPTALSL
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143

Epitope: TLVVSIIIY
Chemical type: Peptide from protein
Sequence: TLVVSIIIY
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 222

Epitope: TPKLRETSV
Chemical type: Peptide from protein
Sequence: TPKLRETSV
Position: 4894-4902
Source molecule (GenBank): KAI4040154.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TPKLRETSV
Chemical type: Peptide from protein
Sequence: TPKLRETSV
Position: 4894-4902
Source molecule (GenBank): KAI4040154.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 142 252

Epitope: YGLPRVVAV
Chemical type: Peptide from protein
Sequence: YGLPRVVAV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: YGLPRVVAV
Chemical type: Peptide from protein
Sequence: YGLPRVVAV
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 142 252
Reference: Garry Dolton; Anna Bulek; Aaron Wall; Hannah Thomas; Jade R Hopkins; Cristina Rius; Sarah Ae Galloway; Thomas Whalley; Li Rong Tan; Théo Morin; Nader Omidvar; Anna Fuller; Katie Topley; Md Samiul Hasan; Shikha Jain; Nirupa D'Souza; Thomas Hodges-Hoyland; Owen B Spiller; Deborah Kronenberg-Versteeg; Barbara Szomolay; Hugo A van den Berg; Lucy C Jones; Mark Peakman; David K Cole; Pierre J Rizkallah; Andrew K Sewell. "HLA A*24:02-restricted T cell receptors cross-recognize bacterial and preproinsulin peptides in type 1 diabetes." The Journal of clinical investigation (2024).

Epitope: KYPRLMNIV
Chemical type: Peptide, no natural source
Sequence: KYPRLMNIV
Assay category: TCell
Result: Positive
Host:  21-35 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: QYPPLVPIM
Chemical type: Peptide from protein
Sequence: QYPPLVPIM
Position: 170-178
Source molecule (GenBank): XP_023089403.1
Assay category: TCell
Result: Positive
Host:  21-35 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NLPPLAPIT
Chemical type: Peptide from protein
Sequence: NLPPLAPIT
Position: 514-522
Source molecule (GenBank): GMF80170.1
Assay category: TCell
Result: Positive
Host:  21-35 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Chen Liang; Lujing Geng; Yifan Dong; Huiyong Zhang. "VEGF165b mutant can be used as a protein carrier to form a chimeric tumor vaccine with Mucin1 peptide to elicit an anti-tumor response." Molecular immunology (2024).

Epitope: Muc1 peptide
Chemical type: Peptide from protein
Sequence: STAPPAHGVTSAPDTRPAPGSTAPP
Position: 130-154
Source molecule (GenBank): P15941.3
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Muc1 peptide
Chemical type: Peptide from protein
Sequence: STAPPAHGVTSAPDTRPAPGSTAPP
Position: 130-154
Source molecule (GenBank): P15941.3
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Muc1 peptide
Chemical type: Peptide from protein
Sequence: STAPPAHGVTSAPDTRPAPGSTAPP
Position: 130-154
Source molecule (GenBank): P15941.3
Assay category: TCell
Result: Positive
Host:  6-8 weeks

Epitope: Muc1 peptide
Chemical type: Peptide from protein
Sequence: STAPPAHGVTSAPDTRPAPGSTAPP
Position: 130-154
Source molecule (GenBank): P15941.3
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Reference: Sofie Gielis; Donovan Flumens; Sanne van der Heijden; Maarten Versteven; Hans De Reu; Esther Bartholomeus; Jolien Schippers; Diana Campillo-Davo; Zwi N Berneman; Sébastien Anguille; Evelien Smits; Benson Ogunjimi; Eva Lion; Kris Laukens; Pieter Meysman. "Analysis of Wilms' tumor protein 1 specific TCR repertoire in AML patients uncovers higher diversity in patients in remission than in relapsed." Annals of hematology (2025).

Epitope: WT1-126
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Md Kamal Hossain; Majid Davidson; Jack Feehan; John M Matsoukas; Kulmira Nurgali; Vasso Apostolopoulos. "A methamphetamine vaccine using short monoamine and diamine peptide linkers and poly-mannose." Bioorganic & medicinal chemistry (2024).

Epitope: Hapten 2
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Mogjiborahman Salek; Jonas D Förster; Jonas P Becker; Marten Meyer; Pornpimol Charoentong; Yanhong Lyu; Katharina Lindner; Catharina Lotsch; Michael Volkmar; Frank Momburg; Isabel Poschke; Stefan Fröhling; Marc Schmitz; Rienk Offringa; Michael Platten; Dirk Jäger; Inka Zörnig; Angelika B Riemer. "optiPRM: A Targeted Immunopeptidomics LC-MS Workflow With Ultra-High Sensitivity for the Detection of Mutation-Derived Tumor Neoepitopes From Limited Input Material." Molecular & cellular proteomics : MCP (2024).

Epitope: RIAESLPVV
Chemical type: Peptide, no natural source
Sequence: RIAESLPVV
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 142 143 40 311 8

Epitope: ARFMSPMVF
Chemical type: Peptide, no natural source
Sequence: ARFMSPMVF
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ARFMSPMVF
Chemical type: Peptide, no natural source
Sequence: ARFMSPMVF
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ARFMSPMVF
Chemical type: Peptide, no natural source
Sequence: ARFMSPMVF
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 211 251 190 305 3
Reference: Mauro Bombaci; Enrico Mario Alessandro Fassi; Andrea Gobbini; Davide Mileto; Irene Cassaniti; Elisa Pesce; Emanuele Casali; Alessandro Mancon; Jose' Sammartino; Alessandro Ferrari; Elena Percivalle; Romualdo Grande; Edoardo Marchisio; Maria Rita Gismondo; Sergio Abrignani; Fausto Baldanti; Giorgio Colombo; Renata Grifantini. "High-throughput peptide array analysis and computational techniques for serological profiling of flavivirus infections: Implications for diagnostics and vaccine development." Journal of medical virology (2024).

Epitope: NS3 VELMRRGDLPVWLSY
Chemical type: Peptide from protein
Sequence: VELMRRGDLPVWLSY
Position: 2011-2025
Source molecule (GenBank): QFS19562.1
Assay category: BCell
Result: Positive

Epitope: NS5 EAGRTLRVLNLVENW
Chemical type: Peptide from protein
Sequence: EAGRTLRVLNLVENW
Position: 2648-2662
Source molecule (GenBank): UNO86144.1
Assay category: BCell
Result: Positive
Reference: Wenqi Yue; Songyuan Huang; Shiwen Lin; Xue Feng; Li Yan; Zhencong Yang; Zhoujin Xu; Xuli Wu. "Prediction, identification, and analysis of major B-cell linear epitopes of bomb m 6 from silkworm pupa." Food chemistry (2025).

Epitope: P14
Chemical type: Peptide from protein
Sequence: LQGSKDIVRDCFPVE
Position: 83-97
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive

Epitope: P14
Chemical type: Peptide from protein
Sequence: LQGSKDIVRDCFPVE
Position: 83-97
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive

Epitope: P15
Chemical type: Peptide from protein
Sequence: DIVRDCFPVEFRLIF
Position: 88-102
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive-Low

Epitope: P15
Chemical type: Peptide from protein
Sequence: DIVRDCFPVEFRLIF
Position: 88-102
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive-Low

Epitope: P39
Chemical type: Peptide from protein
Sequence: VLFYIYNREYSKALT
Position: 208-222
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive-Low

Epitope: P39
Chemical type: Peptide from protein
Sequence: VLFYIYNREYSKALT
Position: 208-222
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Negative

Epitope: P41
Chemical type: Peptide from protein
Sequence: SKALTLSRTVEPSGH
Position: 218-232
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive

Epitope: P41
Chemical type: Peptide from protein
Sequence: SKALTLSRTVEPSGH
Position: 218-232
Source molecule (GenBank): Q00802
Assay category: BCell
Result: Positive-Low
Reference: Ruby Sharma; Nitin P Amdare; Agnidipta Ghosh; Jennifer Schloss; John Sidney; Scott J Garforth; Yessenia Lopez; Alev Celikgil; Alessandro Sette; Steven C Almo; Teresa P DiLorenzo. "Structural and biochemical analysis of highly similar HLA-B allotypes differentially associated with type 1 diabetes." The Journal of biological chemistry (2024).

Epitope: DDX3X 2 9mer
Chemical type: Peptide from protein
Sequence: SHVAVENAL
Position: 2-10
Source molecule (GenBank): O00571.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 696.0

Epitope: DDX3X 2 9mer
Chemical type: Peptide from protein
Sequence: SHVAVENAL
Position: 2-10
Source molecule (GenBank): O00571.3
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 11.0

Epitope: DDX3X 2 9mer
Chemical type: Peptide from protein
Sequence: SHVAVENAL
Position: 2-10
Source molecule (GenBank): O00571.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 321.0
Reference: Louise C Rowntree; Jennifer Audsley; Lilith F Allen; Hayley A McQuilten; Ruth R Hagen; Priyanka Chaurasia; Jan Petersen; Dene R Littler; Hyon-Xhi Tan; Lydia Murdiyarso; Jennifer R Habel; Isabelle J H Foo; Wuji Zhang; Elizabeth R V Ten Berge; Hanujah Ganesh; Prathanporn Kaewpreedee; Kelly W K Lee; Samuel M S Cheng; Janette S Y Kwok; Dhilshan Jayasinghe; Stephanie Gras; Jennifer A Juno; Adam K Wheatley; Stephen J Kent; Jamie Rossjohn; Allen C Cheng; Tom C Kotsimbos; Jason A Trubiano; Natasha E Holmes; Ken Ka Pang Chan; David S C Hui; Malik Peiris; Leo L M Poon; Sharon R Lewin; Peter C Doherty; Irani Thevarajan; Sophie A Valkenburg; Katherine Kedzierska; Thi H O Nguyen. "SARS-CoV-2-specific CD8<sup>+</sup> T cells from people with long COVID establish and maintain effector phenotype and key TCR signatures over 2 years." Proceedings of the National Academy of Sciences of the United States of America (2024).

Epitope: S1208
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S1208
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S1208
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S321
Chemical type: Peptide from protein
Sequence: QPTESIVRF
Position: 321-329
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S321
Chemical type: Peptide from protein
Sequence: QPTESIVRF
Position: 321-329
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S321
Chemical type: Peptide from protein
Sequence: QPTESIVRF
Position: 321-329
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive-Intermediate
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: N322
Chemical type: Peptide from protein
Sequence: MEVTPSGTW
Position: 322-330
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: N322
Chemical type: Peptide from protein
Sequence: MEVTPSGTW
Position: 322-330
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: N322
Chemical type: Peptide from protein
Sequence: MEVTPSGTW
Position: 322-330
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive-High
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Wanli Zhang; Xupeiyao Shi; Shitong Huang; Qiumin Yu; Zijie Wu; Wenbin Xie; Binghua Li; Yanchao Xu; Zheng Gao; Guozhi Li; Qianqian Qian; Tiandi He; Jiaxue Zheng; Tingran Zhang; Yue Tong; Danni Deng; Xiangdong Gao; Hong Tian; Wenbing Yao. "NitraTh epitope-based neoantigen vaccines for effective tumor immunotherapy." Cancer immunology, immunotherapy : CII (2024).

Epitope: LYZ2
Chemical type: Peptide, no natural source
Sequence: TYYGIFQI
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Haiyan Lu; Junjun Shao; Wei Liu; Shandian Gao; Guangqing Zhou; Xiaoyu Ning; Haiyan Huang; Yijia Liu; Huiyun Chang. "Screening and identification of linear B-cell epitopes on structural proteins of African Swine Fever Virus." Virus research (2024).

Epitope: epit12-3
Chemical type: Peptide from protein
Sequence: VVRTEKKTFPQVASLKG
Position: 125-141
Source molecule (GenBank): QBH90564.1
Assay category: BCell
Result: Negative
Reference: Elizabeth Houston; Kepalee Saeng-Chuto; Patumporn Jermsutjarit; Luis Giménez-Lirola; Avanti Sinha; Juan Carlos Mora-Díaz; Dachrit Nilubol; Nicolas F Villarino; Pablo Piñeyro. "Characterization of the immunodominant regions of Senecavirus A-VP1 structural protein via ELISA epitope mapping." Veterinary microbiology (2024).

Epitope: SVA-VP1-PEP 18
Chemical type: Peptide from protein
Sequence: SYKQKMLMQ
Position: 929-937
Source molecule (GenBank): ABG23522.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: SVA-VP1-PEP 18
Chemical type: Peptide from protein
Sequence: SYKQKMLMQ
Position: 929-937
Source molecule (GenBank): ABG23522.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: SVA-VP1-PEP 18
Chemical type: Peptide from protein
Sequence: SYKQKMLMQ
Position: 929-937
Source molecule (GenBank): ABG23522.1
Assay category: BCell
Result: Positive

Epitope: SVA-VP1-PEP 18
Chemical type: Peptide from protein
Sequence: SYKQKMLMQ
Position: 929-937
Source molecule (GenBank): ABG23522.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: SVA-VP1-PEP 18
Chemical type: Peptide from protein
Sequence: SYKQKMLMQ
Position: 929-937
Source molecule (GenBank): ABG23522.1
Assay category: BCell
Result: Positive-Low
Host:  6 weeks
Reference: Markus H Kainulainen; Jessica R Harmon; Elif Karaaslan; Jackson Kyondo; Amy Whitesell; Sam Twongyeirwe; Jason H Malenfant; Jimmy Baluku; Aaron Kofman; Éric Bergeron; Michelle A Waltenburg; Luke Nyakarahuka; Stephen Balinandi; Caitlin M Cossaboom; Mary J Choi; Trevor R Shoemaker; Joel M Montgomery; Christina F Spiropoulou. "A public, cross-reactive glycoprotein epitope confounds Ebola virus serology." Journal of medical virology (2024).

Epitope: 9
Chemical type: Peptide from protein
Sequence: SATKRWGFRSGVPPKVVNYEAGEWA
Position: 81-105
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 9
Chemical type: Peptide from protein
Sequence: SATKRWGFRSGVPPKVVNYEAGEWA
Position: 81-105
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 9
Chemical type: Peptide from protein
Sequence: SATKRWGFRSGVPPKVVNYEAGEWA
Position: 81-105
Source molecule (GenBank): P87666
Assay category: BCell
Result: Positive

Epitope: 16
Chemical type: Peptide from protein
Sequence: FAFHKEGAFFLYDRLASTVIYRGTT
Position: 151-175
Source molecule (GenBank): P87666
Assay category: BCell
Result: Positive-Low

Epitope: 16
Chemical type: Peptide from protein
Sequence: FAFHKEGAFFLYDRLASTVIYRGTT
Position: 151-175
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 16
Chemical type: Peptide from protein
Sequence: FAFHKEGAFFLYDRLASTVIYRGTT
Position: 151-175
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 19
Chemical type: Peptide from protein
Sequence: VAFLILPQAKKDFFSSHPLREPVNA
Position: 181-205
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 19
Chemical type: Peptide from protein
Sequence: VAFLILPQAKKDFFSSHPLREPVNA
Position: 181-205
Source molecule (GenBank): P87666
Assay category: BCell
Result: Positive-Low

Epitope: 19
Chemical type: Peptide from protein
Sequence: VAFLILPQAKKDFFSSHPLREPVNA
Position: 181-205
Source molecule (GenBank): P87666
Assay category: BCell
Result: Positive

Epitope: 37
Chemical type: Peptide from protein
Sequence: AVSHLTTLATISTSPQPPTTKPGPD
Position: 361-385
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 37
Chemical type: Peptide from protein
Sequence: AVSHLTTLATISTSPQPPTTKPGPD
Position: 361-385
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 37
Chemical type: Peptide from protein
Sequence: AVSHLTTLATISTSPQPPTTKPGPD
Position: 361-385
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 63
Chemical type: Peptide from protein
Sequence: DKIDQIIHDFVDKTLPDQGDNDNWW
Position: 621-645
Source molecule (GenBank): P87666
Assay category: BCell
Result: Negative

Epitope: 63
Chemical type: Peptide from protein
Sequence: DKIDQIIHDFVDKTLPDQGDNDNWW
Position: 621-645
Source molecule (GenBank): P87666
Assay category: BCell
Result: Positive

Epitope: 63
Chemical type: Peptide from protein
Sequence: DKIDQIIHDFVDKTLPDQGDNDNWW
Position: 621-645
Source molecule (GenBank): P87666
Assay category: BCell
Result: Positive
Reference: Wenhan Kang; Jiukai Zhang; Ning Yu; Liyang Wei; Ying Chen. "Screening of IgE-Binding Epitopes of Peach Allergenic Protein Pru p 7 Based on an Immune Microarray Assay." Journal of agricultural and food chemistry (2024).

Epitope: P-3
Chemical type: Peptide from protein
Sequence: DLKNSKGN
Position: 77-84
Source molecule (GenBank): XP_007223838.1
Assay category: BCell
Result: Positive
Host:  27-54 years

Epitope: P-3
Chemical type: Peptide from protein
Sequence: DLKNSKGN
Position: 77-84
Source molecule (GenBank): XP_007223838.1
Assay category: BCell
Result: Positive
Host:  27-54 years
Reference: Yana V Serdyuk; Ksenia V Zornikova; Dmitry V Dianov; Nataliia O Ivanova; Vassa D Davydova; Ekaterina I Fefelova; Tatiana A Nenasheva; Saveliy A Sheetikov; Apollinariya V Bogolyubova. "T-Cell Receptors Cross-Reactive to Coronaviral Epitopes Homologous to the SPR Peptide." Biochemistry. Biokhimiia (2024).

Epitope: SPR S105L
Chemical type: Peptide from protein
Sequence: LPRWYFYYL
Position: 119-127
Source molecule (GenBank): Q0ZME3.1
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered
Reference: Weixu Feng; Zhuo Chen; Lianpeng Wu; Xiuting Chen; Qingfeng Li; Yunru Xiang; Yanru Guo; Wangqi Du; Jun Chen; Shanli Zhu; Haiyan Dong; Xiangyang Xue; Kong-Nan Zhao; Lifang Zhang. "A novel HBc-S230 protein chimeric VLPs induced robust immune responses against SARS-CoV-2." International immunopharmacology (2024).

Epitope: 12
Chemical type: Peptide from protein
Sequence: ANQFNSAIGKIQDSLSSTAS
Position: 924-943
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Negative
Host: F 6-8 weeks

Epitope: 16
Chemical type: Peptide from protein
Sequence: KQLSSNFGAISSVLNDILSR
Position: 964-983
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Negative
Host: F 6-8 weeks
Reference: Agnieszka Razim; Katarzyna Pacyga-Prus; Wioletta Kazana-Płuszka; Agnieszka Zabłocka; Józefa Macała; Hubert Ciepłucha; Andrzej Gamian; Sabina Górska. "Differential patterns of antibody response against SARS-CoV-2 nucleocapsid epitopes detected in sera from patients in the acute phase of COVID-19, convalescents, and pre-pandemic individuals." Pathogens and disease (2024).

Epitope: SARS-CoV2 P1
Chemical type: Peptide from protein
Sequence: MSDNGPQNQRNAPRITFGGP
Position: 1-20
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P1
Chemical type: Peptide from protein
Sequence: MSDNGPQNQRNAPRITFGGP
Position: 1-20
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P1
Chemical type: Peptide from protein
Sequence: MSDNGPQNQRNAPRITFGGP
Position: 1-20
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-Low

Epitope: SARS-CoV2 P1
Chemical type: Peptide from protein
Sequence: MSDNGPQNQRNAPRITFGGP
Position: 1-20
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P1
Chemical type: Peptide from protein
Sequence: MSDNGPQNQRNAPRITFGGP
Position: 1-20
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P1
Chemical type: Peptide from protein
Sequence: MSDNGPQNQRNAPRITFGGP
Position: 1-20
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Positive-High

Epitope: SARS-CoV2 P6
Chemical type: Peptide from protein
Sequence: NQLESKMSGKGQQQQGQTVT
Position: 228-247
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P6
Chemical type: Peptide from protein
Sequence: NQLESKMSGKGQQQQGQTVT
Position: 228-247
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P6
Chemical type: Peptide from protein
Sequence: NQLESKMSGKGQQQQGQTVT
Position: 228-247
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P6
Chemical type: Peptide from protein
Sequence: NQLESKMSGKGQQQQGQTVT
Position: 228-247
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P6
Chemical type: Peptide from protein
Sequence: NQLESKMSGKGQQQQGQTVT
Position: 228-247
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV2 P6
Chemical type: Peptide from protein
Sequence: NQLESKMSGKGQQQQGQTVT
Position: 228-247
Source molecule (GenBank): P0DTC9.1
Assay category: BCell
Result: Negative
Reference: Ritika Tewari; Soo Jung Yang; Ethan D McClain; Alex Hu; Emma Mortensen; Aleah DeSchmidt; Janice Chen; Aravind Kancharla; Akhilesh K Singh; Eddie A James; Blaire E Burman; Asma Siddique; David J Rawlings; Chandra Patel; Karen Cerosaletti; Jane H Buckner. "Identification of a novel PDC-E2 epitope in primary biliary cholangitis: Application for engineered Treg therapy." Journal of autoimmunity (2024).

Epitope: PDC-E2 425-437
Chemical type: Peptide from protein
Sequence: ISNIRRVIAQRLM
Position: 425-437
Source molecule (GenBank): P10515.3
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 301.527
Reference: Natalia Drosu; Monique Anderson; Philippe A Bilodeau; Shuhei Nishiyama; Takahisa Mikami; Natasha Bobrowski-Khoury; Jackson Cabot; David Housman; Michael Levy. "CD4 T cells restricted to DRB1*15:01 recognize two Epstein-Barr virus glycoproteins capable of intracellular antigen presentation." Proceedings of the National Academy of Sciences of the United States of America (2024).

Epitope: BORF1(289-302)
Chemical type: Peptide from protein
Sequence: IMNILRIYYSPSIM
Position: 289-302
Source molecule (GenBank): P03187.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo