LiteFold/IEDB huggingface dataset:
Reference: Junya Ichikawa; Tatsuya Yoshida; Ariel Isser; Andressa S Laino; Melinda Vassallo; David Woods; Sojung Kim; Mathias Oelke; Kristi Jones; Jonathan P Schneck; Jeffrey S Weber. "Rapid Expansion of Highly Functional Antigen-Specific T Cells from Patients with Melanoma by Nanoscale Artificial Antigen-Presenting Cells." Clinical cancer research : an official journal of the American Association for Cancer Research (2020).

Epitope: MART-1 27-35
Chemical type: Peptide from protein
Sequence: AAGIGILTV
Position: 27-35
Source molecule (GenBank): Q16655.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MART-1 27-35
Chemical type: Peptide from protein
Sequence: AAGIGILTV
Position: 27-35
Source molecule (GenBank): Q16655.1
Assay category: MhcBinding
Result: Positive

Epitope: gp100 209-217
Chemical type: Peptide from protein
Sequence: ITDQVPFSV
Position: 209-217
Source molecule (GenBank): P40967.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: H Daiko; T Marafioti; T Fujiwara; Y Shirakawa; T Nakatsura; K Kato; I Puccio; T Hikichi; S Yoshimura; T Nakagawa; M Furukawa; K Stoeber; M Nagira; N Ide; T Kojima. "Exploratory open-label clinical study to determine the S-588410 cancer peptide vaccine-induced tumor-infiltrating lymphocytes and changes in the tumor microenvironment in esophageal cancer patients." Cancer immunology, immunotherapy : CII (2020).

Epitope: URLC10
Chemical type: Peptide from protein
Sequence: RYCNLEGPPI
Position: 119-128
Source molecule (GenBank): Q17RY6.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: URLC10
Chemical type: Peptide from protein
Sequence: RYCNLEGPPI
Position: 119-128
Source molecule (GenBank): Q17RY6.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: URLC10
Chemical type: Peptide from protein
Sequence: RYCNLEGPPI
Position: 119-128
Source molecule (GenBank): Q17RY6.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: URLC10
Chemical type: Peptide from protein
Sequence: RYCNLEGPPI
Position: 119-128
Source molecule (GenBank): Q17RY6.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Masao Nakajima; Shoichi Hazama; Koji Tamada; Keiko Udaka; Yasunobu Kouki; Toshinari Uematsu; Hideki Arima; Akira Saito; Shun Doi; Hiroto Matsui; Yoshitaro Shindo; Satoshi Matsukuma; Shinsuke Kanekiyo; Yukio Tokumitsu; Shinobu Tomochika; Michihisa Iida; Shin Yoshida; Yuki Nakagami; Nobuaki Suzuki; Shigeru Takeda; Shigeru Yamamoto; Shigefumi Yoshino; Tomio Ueno; Hiroaki Nagano. "A phase I study of multi-HLA-binding peptides derived from heat shock protein 70/glypican-3 and a novel combination adjuvant of hLAG-3Ig and Poly-ICLC for patients with metastatic gastrointestinal cancers: YNP01 trial." Cancer immunology, immunotherapy : CII (2020).

Epitope: GPC-3
Chemical type: Peptide from protein
Sequence: SALDINECL
Position: 190-198
Source molecule (GenBank): P51654.1
Assay category: MhcBinding
Result: Positive

Epitope: GPC-3
Chemical type: Peptide from protein
Sequence: SALDINECL
Position: 190-198
Source molecule (GenBank): P51654.1
Assay category: MhcBinding
Result: Positive

Epitope: GPC-3
Chemical type: Peptide from protein
Sequence: SALDINECL
Position: 190-198
Source molecule (GenBank): P51654.1
Assay category: MhcBinding
Result: Positive

Epitope: GPC-8
Chemical type: Peptide from protein
Sequence: ARLNMEQLL
Position: 85-93
Source molecule (GenBank): P51654.1
Assay category: MhcBinding
Result: Positive

Epitope: GPC-8
Chemical type: Peptide from protein
Sequence: ARLNMEQLL
Position: 85-93
Source molecule (GenBank): P51654.1
Assay category: MhcBinding
Result: Positive

Epitope: GPC-8
Chemical type: Peptide from protein
Sequence: ARLNMEQLL
Position: 85-93
Source molecule (GenBank): P51654.1
Assay category: MhcBinding
Result: Positive
Reference: Yu Akazawa; Yuki Saito; Toshiaki Yoshikawa; Keigo Saito; Kazuto Nosaka; Manami Shimomura; Shoichi Mizuno; Yasunari Nakamoto; Tetsuya Nakatsura. "Efficacy of immunotherapy targeting the neoantigen derived from epidermal growth factor receptor T790M/C797S mutation in non-small cell lung cancer." Cancer science (2020).

Epitope: T790M/C797S-D
Chemical type: Peptide, no natural source
Sequence: IMQLMPFGSL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: T790M/C797S-D
Chemical type: Peptide, no natural source
Sequence: IMQLMPFGSL
Assay category: MhcBinding
Result: Positive-Intermediate
Reference: Winifred Lo; Maria Parkhurst; Paul F Robbins; Eric Tran; Yong-Chen Lu; Li Jia; Jared J Gartner; Anna Pasetto; Drew Deniger; Parisa Malekzadeh; Thomas E Shelton; Todd Prickett; Satyajit Ray; Scott Kivitz; Biman C Paria; Isaac Kriley; David S Schrump; Steven A Rosenberg. "Immunologic Recognition of a Shared p53 Mutated Neoantigen in a Patient with Metastatic Colorectal Cancer." Cancer immunology research (2019).

Epitope: C1orf159
Chemical type: Peptide, no natural source
Sequence: SSGTPGRPHPGALRVAASLFLGTFF
Assay category: TCell
Result: Negative
MHC allele types: 143 215 255 257 307 311
Host: F 36 years
Cell type: tumor infiltrating lymphocyte
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: BOLL
Chemical type: Peptide, no natural source
Sequence: NDRAGVSKGYGFITFETQEDAQKIL
Assay category: TCell
Result: Negative
MHC allele types: 143 215 255 257 307 311
Host: F 36 years
Cell type: tumor infiltrating lymphocyte
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: IMPG2
Chemical type: Peptide, no natural source
Sequence: IQEPKSAVSFLLREESTDLSLATKK
Assay category: TCell
Result: Negative
MHC allele types: 143 215 255 257 307 311
Host: F 36 years
Cell type: tumor infiltrating lymphocyte
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: TACC2
Chemical type: Peptide, no natural source
Sequence: PPGPTDGAKVHEGSTSPAVAKEGSR
Assay category: TCell
Result: Negative
MHC allele types: 143 215 255 257 307 311
Host: F 36 years
Cell type: tumor infiltrating lymphocyte
Tissue: lymphoid
Culture conditions: Direct Ex Vivo

Epitope: SSSCA1
Chemical type: Peptide, no natural source
Sequence: AAGLKAAQGPPALAVPPNTDVMACT
Assay category: TCell
Result: Negative
MHC allele types: 143 215 255 257 307 311
Host: F 36 years
Cell type: tumor infiltrating lymphocyte
Tissue: lymphoid
Culture conditions: Direct Ex Vivo
Reference: Maryline Mancini-Bourgine; Hélène Fontaine; Daniel Scott-Algara; Stanislas Pol; Christian Bréchot; Marie-Louise Michel. "Induction or expansion of T-cell responses by a hepatitis B DNA vaccine administered to chronic HBV carriers." Hepatology (Baltimore, Md.) (2004).

Epitope: HBc 50 – 69
Chemical type: Peptide from protein
Sequence: TPPATRPPNAPIL
Assay category: TCell
Result: Positive
Host: M 20-58 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Ugur Sahin; Alexander Muik; Isabel Vogler; Evelyna Derhovanessian; Lena M Kranz; Mathias Vormehr; Jasmin Quandt; Nicole Bidmon; Alexander Ulges; Alina Baum; Kristen E Pascal; Daniel Maurus; Sebastian Brachtendorf; Verena Lörks; Julian Sikorski; Peter Koch; Rolf Hilker; Dirk Becker; Ann-Kathrin Eller; Jan Grützner; Manuel Tonigold; Carsten Boesler; Corinna Rosenbaum; Ludwig Heesen; Marie-Cristine Kühnle; Asaf Poran; Jesse Z Dong; Ulrich Luxemburger; Alexandra Kemmer-Brück; David Langer; Martin Bexon; Stefanie Bolte; Tania Palanche; Armin Schultz; Sybille Baumann; Azita J Mahiny; Gábor Boros; Jonas Reinholz; Gábor T Szabó; Katalin Karikó; Pei-Yong Shi; Camila Fontes-Garfias; John L Perez; Mark Cutler; David Cooper; Christos A Kyratsous; Philip R Dormitzer; Kathrin U Jansen; Özlem Türeci. "BNT162b2 vaccine induces neutralizing antibodies and poly-specific T cells in humans." Nature (2021).

Epitope: S 1208-1216
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): YP_009724390.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S 321-329
Chemical type: Peptide from protein
Sequence: QPTESIVRF
Position: 321-329
Source molecule (GenBank): YP_009724390.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Francesca Nuti; Feliciana Real Fernandez; Giuseppina Sabatino; Elisa Peroni; Barbara Mulinacci; Ilaria Paolini; Margherita Di Pisa; Caterina Tiberi; Francesco Lolli; Martina Petruzzo; Roberta Lanzillo; Vincenzo Brescia Morra; Paolo Rovero; Anna Maria Papini. "A Multiple -Glucosylated Peptide Epitope Efficiently Detecting Antibodies in Multiple Sclerosis." Brain sciences (2020).

Epitope: [Asn7(Glc)] CSF114(2–13) (5)
Chemical type: Peptide, no natural source
Sequence: PRVERNGHSVFL
Assay category: BCell
Result: Negative

Epitope: [Asn7(Glc)] CSF114(2–13) (5)
Chemical type: Peptide, no natural source
Sequence: PRVERNGHSVFL
Assay category: BCell
Result: Positive
Quantitative measurement: 35.0

Epitope: Ac-ERN(Glc)GT-NH2 (17)
Chemical type: Peptide, no natural source
Sequence: ERNGT
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 580.0

Epitope: Ac-ERN(Glc)KT-NH2 (19)
Chemical type: Peptide, no natural source
Sequence: ERNKT
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 540.0

Epitope: Ac-KGN(Glc)AT-NH2 (22)
Chemical type: Peptide, no natural source
Sequence: KGNAT
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 600.0
Reference: Indre Kucinskaite-Kodze; Martynas Simanavicius; Justas Dapkunas; Milda Pleckaityte; Aurelija Zvirbliene. "Mapping of Recognition Sites of Monoclonal Antibodies Responsible for the Inhibition of Pneumolysin Functional Activity." Biomolecules (2020).

Epitope: PLY 384-389
Chemical type: Peptide from protein
Sequence: YDHQGK
Position: 384-389
Source molecule (GenBank): Q04IN8.1
Assay category: BCell
Result: Positive
Host:  8 weeks

Epitope: PLY 384-389
Chemical type: Peptide from protein
Sequence: YDHQGK
Position: 384-389
Source molecule (GenBank): Q04IN8.1
Assay category: BCell
Result: Positive
Host:  8 weeks

Epitope: PLY 384-389
Chemical type: Peptide from protein
Sequence: YDHQGK
Position: 384-389
Source molecule (GenBank): Q04IN8.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.2
Host:  8 weeks

Epitope: PLY 384-389
Chemical type: Peptide from protein
Sequence: YDHQGK
Position: 384-389
Source molecule (GenBank): Q04IN8.1
Assay category: BCell
Result: Positive
Host:  8 weeks
Reference: Jinkai Wan; Shenghui Xing; Longfei Ding; Yongheng Wang; Chenjian Gu; Yanling Wu; Bowen Rong; Cheng Li; Siqing Wang; Kun Chen; Chenxi He; Dandan Zhu; Songhua Yuan; Chengli Qiu; Chen Zhao; Lei Nie; Zhangzhao Gao; Jingyu Jiao; Xiaoyan Zhang; Xiangxi Wang; Tianlei Ying; Haibin Wang; Youhua Xie; Yanan Lu; Jianqing Xu; Fei Lan. "Human-IgG-Neutralizing Monoclonal Antibodies Block the SARS-CoV-2 Infection." Cell reports (2020).

Epitope: Epitope of mAb 553-49 and 535-60 on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: F374, S375, T376, F377, C379, F392, D427, E516
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Host: M 40 years

Epitope: Epitope of mAb 553-49 and 535-60 on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: F374, S375, T376, F377, C379, F392, D427, E516
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Quantitative measurement: 5.753
Host: M 40 years

Epitope: Epitope of mAb 553-49 and 535-60 on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: F374, S375, T376, F377, C379, F392, D427, E516
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Host: M 40 years

Epitope: Epitope of mAb 553-49 and 535-60 on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: F374, S375, T376, F377, C379, F392, D427, E516
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.076
Host: M 40 years

Epitope: Epitope of mAb 553-49 and 535-60 on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: F374, S375, T376, F377, C379, F392, D427, E516
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Host: M 40 years

Epitope: Epitope of mAb 553-49 and 535-60 on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: F374, S375, T376, F377, C379, F392, D427, E516
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive-Intermediate
Host: M 40 years
Reference: Meng Yuan; Hejun Liu; Nicholas C Wu; Chang-Chun D Lee; Xueyong Zhu; Fangzhu Zhao; Deli Huang; Wenli Yu; Yuanzi Hua; Henry Tien; Thomas F Rogers; Elise Landais; Devin Sok; Joseph G Jardine; Dennis R Burton; Ian A Wilson. "Structural basis of a shared antibody response to SARS-CoV-2." Science (New York, N.Y.) (2020).

Epitope: Epitope of CC12.3 Fab on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, T415, G416, K417, D420, Y421, Y453, L455, F456, R457, K458, N460, Y473, A475, G476, S477, F486, N487, Y489, Y495, N501, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Quantitative measurement: 145000.0
Host:  mean: 50 years

Epitope: Epitope of CC12.3 Fab on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, T415, G416, K417, D420, Y421, Y453, L455, F456, R457, K458, N460, Y473, A475, G476, S477, F486, N487, Y489, Y495, N501, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0020
Host:  mean: 50 years

Epitope: Epitope of CC12.3 Fab on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, T415, G416, K417, D420, Y421, Y453, L455, F456, R457, K458, N460, Y473, A475, G476, S477, F486, N487, Y489, Y495, N501, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Quantitative measurement: 14.0
Host:  mean: 50 years

Epitope: Epitope of CC12.3 Fab on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, T415, G416, K417, D420, Y421, Y453, L455, F456, R457, K458, N460, Y473, A475, G476, S477, F486, N487, Y489, Y495, N501, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Host:  mean: 50 years

Epitope: Epitope of CC12.3 Fab on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, T415, G416, K417, D420, Y421, Y453, L455, F456, R457, K458, N460, Y473, A475, G476, S477, F486, N487, Y489, Y495, N501, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.34
Host:  mean: 50 years

Epitope: Epitope of CC12.3 Fab on SARS-CoV-2 RBD
Chemical type: Discontinuous protein residues
Discontinuous residues: R403, D405, T415, G416, K417, D420, Y421, Y453, L455, F456, R457, K458, N460, Y473, A475, G476, S477, F486, N487, Y489, Y495, N501, Y505
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.88
Host:  mean: 50 years
Reference: Alexander Greenshields-Watson; Meriem Attaf; Bruce J MacLachlan; Thomas Whalley; Cristina Rius; Aaron Wall; Angharad Lloyd; Hywel Hughes; Kathryn E Strange; Georgina H Mason; Andrea J Schauenburg; Sarah L Hulin-Curtis; James Geary; Yuan Chen; Sarah N Lauder; Kathryn Smart; Dhanasekaran Vijaykrishna; Miguel L Grau; Mikhail Shugay; Robert Andrews; Garry Dolton; Pierre J Rizkallah; Awen M Gallimore; Andrew K Sewell; Andrew J Godkin; David K Cole. "CD4<sup>+</sup> T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features." Cell reports (2020).

Epitope: GLI (M1 129-142)
Chemical type: Peptide from protein
Sequence: GLIYNRMGAVTTEV
Position: 129-142
Source molecule (GenBank): P05777.2
Assay category: TCell
Result: Positive
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GLI (M1 129-142)
Chemical type: Peptide from protein
Sequence: GLIYNRMGAVTTEV
Position: 129-142
Source molecule (GenBank): P05777.2
Assay category: TCell
Result: Positive
Host:  20-60 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GLI (M1 129-142)
Chemical type: Peptide from protein
Sequence: GLIYNRMGAVTTEV
Position: 129-142
Source molecule (GenBank): P05777.2
Assay category: TCell
Result: Positive
Host:  20-60 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PB-1 peptide 32
Chemical type: Peptide from protein
Sequence: NPRMFLAMITYMTRNQPEWF
Position: 314-333
Source molecule (GenBank): P03431.2
Assay category: TCell
Result: Negative
MHC allele types: 46
Host:  20-60 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: M1 peptide 12
Chemical type: Peptide from protein
Sequence: GAKEIALSYSAGALASCMGL
Position: 111-130
Source molecule (GenBank): P05777.2
Assay category: TCell
Result: Negative
MHC allele types: 46
Host:  20-60 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Kirsty L Wilson; Sue D Xiang; Magdalena Plebanski. "Functional Recognition by CD8+ T Cells of Epitopes with Amino Acid Variations Outside Known MHC Anchor or T Cell Receptor Recognition Residues." International journal of molecular sciences (2020).

Epitope: A1
Chemical type: Peptide, no natural source
Sequence: AYIPSEAKI
Assay category: TCell
Result: Positive
Host:  6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Zhong-Yuan Li; Hai-Ting Guo; Guillermo Calderón-Mantilla; Jun-Jun He; Jin-Lei Wang; Boyan B Bonev; Xing-Quan Zhu; Hany M Elsheikha. "Immunostimulatory efficacy and protective potential of putative TgERK7 protein in mice experimentally infected by Toxoplasma gondii." International journal of medical microbiology : IJMM (2020).

Epitope: TgERK7 237-249 peptide B
Chemical type: Peptide from protein
Sequence: TGRPSPEDVDAVK
Position: 237-249
Source molecule (GenBank): KAF4641887.1
Assay category: BCell
Result: Negative
Host: F 6-8 weeks

Epitope: TgERK7 237-249 peptide B
Chemical type: Peptide from protein
Sequence: TGRPSPEDVDAVK
Position: 237-249
Source molecule (GenBank): KAF4641887.1
Assay category: BCell
Result: Negative
Reference: Laura A Novotny; Steven D Goodman; Lauren O Bakaletz. "Targeting a bacterial DNABII protein with a chimeric peptide immunogen or humanised monoclonal antibody to prevent or treat recalcitrant biofilm-mediated infections." EBioMedicine (2020).

Epitope: IHF-Tip-Chimera
Chemical type: Peptide, no natural source
Sequence: RPGRNPKTGDVVPVSARRVVFSLHHRQPRLGRNPKTGDSV
Assay category: BCell
Result: Positive

Epitope: IHF-Tip-Chimera
Chemical type: Peptide, no natural source
Sequence: RPGRNPKTGDVVPVSARRVVFSLHHRQPRLGRNPKTGDSV
Assay category: BCell
Result: Positive

Epitope: IHF-Tip-Chimera
Chemical type: Peptide, no natural source
Sequence: RPGRNPKTGDVVPVSARRVVFSLHHRQPRLGRNPKTGDSV
Assay category: BCell
Result: Positive

Epitope: IHF-Tip-Chimera
Chemical type: Peptide, no natural source
Sequence: RPGRNPKTGDVVPVSARRVVFSLHHRQPRLGRNPKTGDSV
Assay category: BCell
Result: Positive

Epitope: IHF-Tip-Chimera
Chemical type: Peptide, no natural source
Sequence: RPGRNPKTGDVVPVSARRVVFSLHHRQPRLGRNPKTGDSV
Assay category: BCell
Result: Positive
Reference: Takashi Morisaki; Tetsuro Hikichi; Hideya Onishi; Takafumi Morisaki; Makoto Kubo; Tatsuya Hirano; Sachiko Yoshimura; Kazuma Kiyotani; Yusuke Nakamura. "Intranodal Administration of Neoantigen Peptide-loaded Dendritic Cell Vaccine Elicits Epitope-specific T Cell Responses and Clinical Effects in a Patient with Chemorefractory Ovarian Cancer with Malignant Ascites." Immunological investigations (2021).

Epitope: PPOX R441S
Chemical type: Peptide, no natural source
Sequence: FLTAHSLPL
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PPOX R441S
Chemical type: Peptide, no natural source
Sequence: FLTAHSLPL
Assay category: TCell
Result: Positive
Host: F 69 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ARFGEF1 S820I
Chemical type: Peptide, no natural source
Sequence: FAIADTAYV
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ARFGEF1 S820I
Chemical type: Peptide, no natural source
Sequence: FAIADTAYV
Assay category: TCell
Result: Positive
Host: F 69 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PPM1F C259Y
Chemical type: Peptide, no natural source
Sequence: VYALIAGATL
Assay category: TCell
Result: Positive
Host: F 69 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PPM1F C259Y
Chemical type: Peptide, no natural source
Sequence: VYALIAGATL
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: PPM1F C259Y
Chemical type: Peptide, no natural source
Sequence: VYALIAGATL
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Matthew R Vogt; Jianing Fu; Nurgun Kose; Lauren E Williamson; Robin Bombardi; Ian Setliff; Ivelin S Georgiev; Thomas Klose; Michael G Rossmann; Yury A Bochkov; James E Gern; Richard J Kuhn; James E Crowe. "Human antibodies neutralize enterovirus D68 and protect against infection and paralytic disease." Science immunology (2020).

Epitope: Epitope of EV68-159 Fab on Enterovirus D68
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E835, R836, D849; B: T142, G143, S144, T145, P285, T288; C: T375, E376, S377, V379, G380, M381, E382, D387, T526
Source molecule (GenBank): AZL41614.1
Assay category: BCell
Result: Positive
Host: F 17 years

Epitope: Epitope of EV68-159 Fab on Enterovirus D68
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E835, R836, D849; B: T142, G143, S144, T145, P285, T288; C: T375, E376, S377, V379, G380, M381, E382, D387, T526
Source molecule (GenBank): AZL41614.1
Assay category: BCell
Result: Positive
Host:  16-18 years

Epitope: Epitope of EV68-159 Fab on Enterovirus D68
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E835, R836, D849; B: T142, G143, S144, T145, P285, T288; C: T375, E376, S377, V379, G380, M381, E382, D387, T526
Source molecule (GenBank): AZL41614.1
Assay category: BCell
Result: Positive-Low
Host: F 17 years

Epitope: Epitope of EV68-159 Fab on Enterovirus D68
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E835, R836, D849; B: T142, G143, S144, T145, P285, T288; C: T375, E376, S377, V379, G380, M381, E382, D387, T526
Source molecule (GenBank): AZL41614.1
Assay category: BCell
Result: Positive
Host: F 17 years

Epitope: Epitope of EV68-159 Fab on Enterovirus D68
Chemical type: Region on multi-chain protein
Discontinuous residues: A: E835, R836, D849; B: T142, G143, S144, T145, P285, T288; C: T375, E376, S377, V379, G380, M381, E382, D387, T526
Source molecule (GenBank): AZL41614.1
Assay category: BCell
Result: Positive
Host: F 17 years