LiteFold/IEDB huggingface dataset:
Reference: Jiazhen Chen; Qiaoling Ruan; Yaojie Shen; Sen Wang; Lingyun Shao; Wenhong Zhang. "Assessing and screening for T-cell epitopes from Mycobacterium tuberculosis RD2 proteins for the diagnosis of active tuberculosis." The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases (2018).

Epitope: Rv1983-P1
Chemical type: Peptide from protein
Sequence: GYGVSGPGGDGRTVPLEIIH
Position: 34-53
Source molecule (GenBank): REY88957.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1983-P5
Chemical type: Peptide from protein
Sequence: AGLVVSPEDVGGILGVLHMG
Position: 78-97
Source molecule (GenBank): REY88957.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1983-P8
Chemical type: Peptide from protein
Sequence: LYYIFATYTTTVDFGNGIVT
Position: 111-130
Source molecule (GenBank): REY88957.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1987-P3
Chemical type: Peptide from protein
Sequence: IVAILGLAITPVASAATARA
Position: 23-42
Source molecule (GenBank): WP_003409992.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1987-P10
Chemical type: Peptide from protein
Sequence: LSPANWNRIIAPGGSATGGL
Position: 100-119
Source molecule (GenBank): WP_003409992.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1988-P11
Chemical type: Peptide from protein
Sequence: TLLAPNSGLVAADLVLQRAL
Position: 76-95
Source molecule (GenBank): AEJ47026.1
Assay category: TCell
Result: Positive
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1989c-P6
Chemical type: Peptide from protein
Sequence: AIYLADSAQACMVEVERAAQ
Position: 56-75
Source molecule (GenBank): AUS51096.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Rv1989c-P8
Chemical type: Peptide from protein
Sequence: STTAEKMLEAAYRLHTIDVT
Position: 78-97
Source molecule (GenBank): AUS51096.1
Assay category: TCell
Result: Negative
Host:  16-86 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Ellen C Border; Joseph P Sanderson; Thomas Weissensteiner; Andrew B Gerry; Nicholas J Pumphrey. "Affinity-enhanced T-cell receptors for adoptive T-cell therapy targeting MAGE-A10: strategy for selection of an optimal candidate." Oncoimmunology (2019).

Epitope: p1C
Chemical type: Peptide, no natural source
Sequence: CLYDGMEHL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p1S
Chemical type: Peptide, no natural source
Sequence: SLYDGMEHL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p2A
Chemical type: Peptide, no natural source
Sequence: GAYDGMEHL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p2C
Chemical type: Peptide, no natural source
Sequence: GCYDGMEHL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p2H
Chemical type: Peptide, no natural source
Sequence: GHYDGMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p3D
Chemical type: Peptide, no natural source
Sequence: GLDDGMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p3R
Chemical type: Peptide, no natural source
Sequence: GLRDGMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p4G
Chemical type: Peptide, no natural source
Sequence: GLYGGMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p4R
Chemical type: Peptide, no natural source
Sequence: GLYRGMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p4S
Chemical type: Peptide, no natural source
Sequence: GLYSGMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p5Y
Chemical type: Peptide, no natural source
Sequence: GLYDYMEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p6S
Chemical type: Peptide, no natural source
Sequence: GLYDGSEHL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p8P
Chemical type: Peptide, no natural source
Sequence: GLYDGMEPL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p8P
Chemical type: Peptide, no natural source
Sequence: GLYDGMEPL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p8Q
Chemical type: Peptide, no natural source
Sequence: GLYDGMEQL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: p8R
Chemical type: Peptide, no natural source
Sequence: GLYDGMERL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered
Reference: Dominika Polak; Christine Hafner; Peter Briza; Claudia Kitzmüller; Adelheid Elbe-Bürger; Nazanin Samadi; Maria Gschwandtner; Wolfgang Pfützner; Gerhard J Zlabinger; Beatrice Jahn-Schmid; Barbara Bohle. "A novel role for neutrophils in IgE-mediated allergy: Evidence for antigen presentation in late-phase reactions." The Journal of allergy and clinical immunology (2019).

Epitope: Bet v 1 TCC1
Chemical type: Peptide from protein
Sequence: YETETTSVIPAARL
Position: 6-19
Source molecule (GenBank): CAB02158.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Annie Elong Ngono; Matthew P Young; Maximilian Bunz; Zhigang Xu; Sararat Hattakam; Edward Vizcarra; Jose Angel Regla-Nava; William W Tang; Montarop Yamabhai; Jinsheng Wen; Sujan Shresta. "CD4+ T cells promote humoral immunity and viral control during Zika virus infection." PLoS pathogens (2019).

Epitope: Prup3
Chemical type: Peptide, no natural source
Sequence: ASSNGIRNVNNLARTPDRQAC
Assay category: TCell
Result: Positive
Host: F 4-5 weeks
Reference: Elena Lorente; Antonio J Martín-Galiano; Eilon Barnea; Alejandro Barriga; Concepción Palomo; Juan García-Arriaza; Carmen Mir; Pilar Lauzurica; Mariano Esteban; Arie Admon; Daniel López. "Proteomics Analysis Reveals That Structural Proteins of the Virion Core and Involved in Gene Expression Are the Main Source for HLA Class II Ligands in Vaccinia Virus-Infected Cells." Journal of proteome research (2019).

Epitope: SIEGELESLSKR
Chemical type: Peptide from protein
Sequence: SIEGELESLSKR
Position: 172-183
Source molecule (GenBank): AAQ93169.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TDFIEIVKSVLSDEK
Chemical type: Peptide from protein
Sequence: TDFIEIVKSVLSDEK
Position: 21-35
Source molecule (GenBank): AAB59804.1
Assay category: MhcLigandElution
Result: Positive

Epitope: TDFIEIVKSVLSDEK
Chemical type: Peptide from protein
Sequence: TDFIEIVKSVLSDEK
Position: 21-35
Source molecule (GenBank): AAB59804.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DPDADAIARG
Chemical type: Peptide from protein
Sequence: DPDADAIARG
Position: 620-629
Source molecule (GenBank): AAT10496.1
Assay category: MhcLigandElution
Result: Positive
Reference: Yiu-Wing Kam; Cheryl Yi-Pin Lee; Teck-Hui Teo; Shanshan W Howland; Siti Naqiah Amrun; Fok-Moon Lum; Peter See; Nicholas Qing-Rong Kng; Roland G Huber; Mei-Hui Xu; Heng-Liang Tan; Andre Choo; Sebastian Maurer-Stroh; Florent Ginhoux; Katja Fink; Cheng-I Wang; Lisa Fp Ng; Laurent Rénia. "Cross-reactive dengue human monoclonal antibody prevents severe pathologies and death from Zika virus infections." JCI insight (2017).

Epitope: mAb 1B-H1L1 epitope (ZIKV)
Chemical type: Peptide from protein
Sequence: TLVDRGWGNGCGLFGKGS
Position: 385-402
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive

Epitope: mAb 1B-H1L1 epitope (ZIKV)
Chemical type: Peptide from protein
Sequence: TLVDRGWGNGCGLFGKGS
Position: 385-402
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive

Epitope: mAb 1B-H1L1 epitope (ZIKV)
Chemical type: Peptide from protein
Sequence: TLVDRGWGNGCGLFGKGS
Position: 385-402
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive

Epitope: mAb 1B-H1L1 epitope (ZIKV)
Chemical type: Peptide from protein
Sequence: TLVDRGWGNGCGLFGKGS
Position: 385-402
Source molecule (GenBank): AHZ13508.1
Assay category: BCell
Result: Positive
Reference: Jianhua Zhang; Huiqi Huang; Lian Xu; Chaonan Lou; Mi Pan. "Screening and Identification of Linear B Cell Epitopes Within the Nonstructural Proteins of Enterovirus 71." Viral immunology (2019).

Epitope: SP11
Chemical type: Peptide from protein
Sequence: FPTKAGQCGGVVTSVG
Position: 1688-1703
Source molecule (GenBank): AEQ61276.1
Assay category: BCell
Result: Positive-Low
Host:  6-8 months
Reference: Nadia Wauquier; Caroline Petitdemange; Nadine Tarantino; Christopher Maucourant; Moinya Coomber; Victor Lungay; James Bangura; Patrice Debré; Vincent Vieillard. "HLA-C-restricted viral epitopes are associated with an escape mechanism from KIR2DL2<sup>+</sup> NK cells in Lassa virus infection." EBioMedicine (2019).

Epitope: NP300
Chemical type: Peptide from protein
Sequence: YENILYKICL
Position: 303-312
Source molecule (GenBank): Q6GWS1.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 187.0

Epitope: NP400
Chemical type: Peptide from protein
Sequence: QPMSGCYIHF
Position: 404-413
Source molecule (GenBank): AAF86704.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 124.0

Epitope: GP256
Chemical type: Peptide from protein
Sequence: RRLLGTFTWT
Position: 256-265
Source molecule (GenBank): ADY11070.1
Assay category: MhcBinding
Result: Negative

Epitope: GP256
Chemical type: Peptide from protein
Sequence: RRLLGTFTWT
Position: 256-265
Source molecule (GenBank): ADY11070.1
Assay category: MhcBinding
Result: Negative

Epitope: GP256
Chemical type: Peptide from protein
Sequence: RRLLGTFTWT
Position: 256-265
Source molecule (GenBank): ADY11070.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 110.0

Epitope: GP274
Chemical type: Peptide from protein
Sequence: TPGGYCLTRW
Position: 274-283
Source molecule (GenBank): Q6Y627
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 44.0
Reference: Ismael Compañón; Ana Guerreiro; Vincenzo Mangini; Jorge Castro-López; Margarita Escudero-Casao; Alberto Avenoza; Jesús H Busto; Sergio Castillón; Jesús Jiménez-Barbero; Juan L Asensio; Gonzalo Jiménez-Osés; Omar Boutureira; Jesús M Peregrina; Ramón Hurtado-Guerrero; Roberto Fiammengo; Gonçalo J L Bernardes; Francisco Corzana. "Structure-Based Design of Potent Tumor-Associated Antigens: Modulation of Peptide Presentation by Single-Atom O/S or O/Se Substitutions at the Glycosidic Linkage." Journal of the American Chemical Society (2019).

Epitope: Glycopeptide 12
Chemical type: Peptide from protein
Sequence: HGVTSAPDTRPAPGSTAPPA
Position: 136-155
Source molecule (GenBank): P15941.3
Assay category: BCell
Result: Positive

Epitope: Glycopeptide 12
Chemical type: Peptide from protein
Sequence: HGVTSAPDTRPAPGSTAPPA
Position: 136-155
Source molecule (GenBank): P15941.3
Assay category: BCell
Result: Positive-Low

Epitope: Glycopeptide 12
Chemical type: Peptide from protein
Sequence: HGVTSAPDTRPAPGSTAPPA
Position: 136-155
Source molecule (GenBank): P15941.3
Assay category: BCell
Result: Positive
Reference: Ida Hafstrand; Ece Canan Sayitoglu; Anca Apavaloaei; Benjamin John Josey; Renhua Sun; Xiao Han; Sara Pellegrino; Didem Ozkazanc; Renée Potens; Linda Janssen; Johan Nilvebrant; Per-Åke Nygren; Tatyana Sandalova; Sebastian Springer; Anna-Maria Georgoudaki; Adil Doganay Duru; Adnane Achour. "Successive crystal structure snapshots suggest the basis for MHC class I peptide loading and editing by tapasin." Proceedings of the National Academy of Sciences of the United States of America (2019).

Epitope: GL
Chemical type: Peptide from protein
Sequence: GL
Position: 40-41
Source molecule (GenBank): Q9R233.2
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.3

Epitope: GL
Chemical type: Peptide from protein
Sequence: GL
Position: 40-41
Source molecule (GenBank): Q9R233.2
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.78

Epitope: TL10
Chemical type: Peptide from protein
Sequence: EDAGGGGLSK
Position: 34-43
Source molecule (GenBank): Q9R233.2
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.15
Reference: Shuhua Fan; Yongli Wang; Xian Wang; Li Huang; Yunxia Zhang; Xiaomeng Liu; Wenshuai Zhu. "Analysis of the affinity of influenza A virus protein epitopes for swine MHC I by a modified in vitro refolding method indicated cross-reactivity between swine and human MHC I specificities." Immunogenetics (2018).

Epitope: NS1-RLR9
Chemical type: Peptide from protein
Sequence: RLRRDQKSL
Position: 35-43
Source molecule (GenBank): ACR33003.1
Assay category: MhcBinding
Result: Negative
Reference: Neil A Haig; Ziqiang Guan; Demin Li; Andrew McMichael; Christian R H Raetz; Xiao-Ning Xu. "Identification of self-lipids presented by CD1c and CD1d proteins." The Journal of biological chemistry (2011).

Epitope: GM2 (d18:1/24:1(15Z))
Chemical type: Other Non-Sequence
Assay category: MhcLigandElution
Result: Positive
Reference: Lei Fang; Guoming Li; Jiangtao Zhang; Ruizeng Gu; Muyi Cai; Jun Lu. "Identification and mutational analysis of continuous, immunodominant epitopes of the major oyster allergen Crag 1." Clinical immunology (Orlando, Fla.) (2019).

Epitope: Cra g 1 69–85 Peptide 6
Chemical type: Peptide from protein
Sequence: TKLEEAEKTASEAEQET
Assay category: BCell
Result: Positive

Epitope: Cra g 1 233–246 Peptide 12
Chemical type: Peptide from protein
Sequence: KDAENRATEAERTV
Position: 233-246
Source molecule (GenBank): BAH10152.1
Assay category: BCell
Result: Negative
Reference: Jessica E Chukwu; Erin E Congdon; Einar M Sigurdsson; Xiang-Peng Kong. "Structural characterization of monoclonal antibodies targeting C-terminal Ser<sup>404</sup> region of phosphorylated tau protein." mAbs (2019).

Epitope: Epitope of 6B2 Fab on Tau peptide
Chemical type: Peptide from protein
Sequence: TSPRHL
Position: 720-725
Source molecule (GenBank): P10636.5
Assay category: BCell
Result: Positive
Quantitative measurement: 2.62

Epitope: Epitope of 6B2 Fab on Tau peptide
Chemical type: Peptide from protein
Sequence: TSPRHL
Position: 720-725
Source molecule (GenBank): P10636.5
Assay category: BCell
Result: Positive
Quantitative measurement: 4.34

Epitope: Epitope of 6B2 Fab on Tau peptide
Chemical type: Peptide from protein
Sequence: TSPRHL
Position: 720-725
Source molecule (GenBank): P10636.5
Assay category: BCell
Result: Positive
Quantitative measurement: 3.27

Epitope: Epitope of 6B2 Fab on Tau peptide
Chemical type: Peptide from protein
Sequence: TSPRHL
Position: 720-725
Source molecule (GenBank): P10636.5
Assay category: BCell
Result: Positive
Quantitative measurement: 3.9

Epitope: Epitope of 6B2 Fab on Tau peptide
Chemical type: Peptide from protein
Sequence: TSPRHL
Position: 720-725
Source molecule (GenBank): P10636.5
Assay category: BCell
Result: Positive

Epitope: Epitope of 6B2 Fab on Tau peptide
Chemical type: Peptide from protein
Sequence: TSPRHL
Position: 720-725
Source molecule (GenBank): P10636.5
Assay category: BCell
Result: Positive
Quantitative measurement: 2.599
Reference: Е А Kurbatova; I V Yakovleva; E А Akhmatova; Е V Sukhova; D V Yashunsky; Yu E Tsvetkov; N E Nifantiev. "Carbohydrate Specificity and Isotypes of Monoclonal and Polyclonal Antibodies to Conjugated Tetrasaccharide, a Synthetic Analogue of Repeating Unit of Capsular Polysaccharide of Streptococcus Pneumoniae Serotype 14." Bulletin of experimental biology and medicine (2019).

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M

Epitope: Streptococcus pneumoniae type 14 tetrasaccharide
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host: M
Reference: Mamta Kalra; Ulrike Gerdemann; Jessica D Luu; Minthran C Ngo; Ann M Leen; Chrystal U Louis; Cliona M Rooney; Stephen Gottschalk. "Epstein-Barr Virus (EBV)-derived BARF1 encodes CD4- and CD8-restricted epitopes as targets for T-cell immunotherapy." Cytotherapy (2019).

Epitope: p9
Chemical type: Peptide from protein
Sequence: SYWRRVSLGPEIEVS
Position: 33-47
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Positive
MHC allele types: 143 245 281 28 55 430 319 321 357 362 366
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p9
Chemical type: Peptide from protein
Sequence: SYWRRVSLGPEIEVS
Position: 33-47
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Positive
MHC allele types: 143 245 281 28 55 430 319 321 357 362 366
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p16
Chemical type: Peptide from protein
Sequence: GRMHHDVIFIEWPFR
Position: 61-75
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Positive
MHC allele types: 143 211 300 561 424 436 317 322 357 366
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p16
Chemical type: Peptide from protein
Sequence: GRMHHDVIFIEWPFR
Position: 61-75
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Negative
MHC allele types: 143 211 300 561 424 436 317 322 357 366
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p22
Chemical type: Peptide from protein
Sequence: NTFFLVVTAANISHD
Position: 85-99
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Positive
MHC allele types: 143 211 300 561 424 436 317 322 357 366
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p22
Chemical type: Peptide from protein
Sequence: NTFFLVVTAANISHD
Position: 85-99
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Negative
MHC allele types: 143 211 300 561 424 436 317 322 357 366
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p39
Chemical type: Peptide from protein
Sequence: HPHVQWLMPEGVEPA
Position: 153-167
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Negative
MHC allele types: 143 245 281 28 55 430 319 321 357 362 366
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p39
Chemical type: Peptide from protein
Sequence: HPHVQWLMPEGVEPA
Position: 153-167
Source molecule (GenBank): CAD53469.1
Assay category: TCell
Result: Positive
MHC allele types: 143 245 281 28 55 430 319 321 357 362 366
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Sumit Joshi; Narendra Kumar Yadav; Keerti Rawat; Vikash Kumar; Rafat Ali; Amogh Anant Sahasrabuddhe; Mohammad Imran Siddiqi; Wahajul Haq; Shyam Sundar; Anuradha Dube. "Immunogenicity and Protective Efficacy of T-Cell Epitopes Derived From Potential Th1 Stimulatory Proteins of ." Frontiers in immunology (2019).

Epitope: P-05
Chemical type: Peptide from protein
Sequence: YTVMTLARTMPAMLP
Position: 261-275
Source molecule (GenBank): ACT67434.1
Assay category: TCell
Result: Negative
Host:  8-50 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P-05
Chemical type: Peptide from protein
Sequence: YTVMTLARTMPAMLP
Position: 261-275
Source molecule (GenBank): ACT67434.1
Assay category: TCell
Result: Negative
Host:  6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P-20
Chemical type: Peptide from protein
Sequence: HHVMETYTPVTAESV
Position: 311-325
Source molecule (GenBank): ACE74539.1
Assay category: TCell
Result: Negative
Host:  8-50 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P-20
Chemical type: Peptide from protein
Sequence: HHVMETYTPVTAESV
Position: 311-325
Source molecule (GenBank): ACE74539.1
Assay category: TCell
Result: Negative
Host:  6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: P-34
Chemical type: Peptide from protein
Sequence: GEVVAHFKITVLISN
Position: 306-320
Source molecule (GenBank): ACE74541.1
Assay category: TCell
Result: Positive
Host:  8-50 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P-34
Chemical type: Peptide from protein
Sequence: GEVVAHFKITVLISN
Position: 306-320
Source molecule (GenBank): ACE74541.1
Assay category: TCell
Result: Negative
Host:  6-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Daniel L Moss; Hee-Won Park; Ramgopal R Mettu; Samuel J Landry. "Deimmunizing substitutions in  exotoxin domain III perturb antigen processing without eliminating T-cell epitopes." The Journal of biological chemistry (2019).

Epitope: peptide 13
Chemical type: Peptide from protein
Sequence: TSLTLAAPEAAGEVERLIGH
Position: 539-558
Source molecule (GenBank): AAB59097.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Tanner M Johanns; Christopher A Miller; Connor J Liu; Richard J Perrin; Diane Bender; Dale K Kobayashi; Jian L Campian; Michael R Chicoine; Ralph G Dacey; Jiayi Huang; Edward F Fritsch; William E Gillanders; Maxim N Artyomov; Elaine R Mardis; Robert D Schreiber; Gavin P Dunn. "Detection of neoantigen-specific T cells following a personalized vaccine in a patient with glioblastoma." Oncoimmunology (2019).

Epitope: PDIA3 T219S
Chemical type: Peptide, no natural source
Sequence: FEDKSVAYT
Assay category: TCell
Result: Positive
Host: F 66 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Rami Yossef; Eric Tran; Drew C Deniger; Alena Gros; Anna Pasetto; Maria R Parkhurst; Jared J Gartner; Todd D Prickett; Gal Cafri; Paul F Robbins; Steven A Rosenberg. "Enhanced detection of neoantigen-reactive T cells targeting unique and shared oncogenes for personalized cancer immunotherapy." JCI insight (2018).

Epitope: PLXNB3 W609G
Chemical type: Peptide, no natural source
Sequence: PGISSQHFTYQGGVGGSWPVCSGLG
Assay category: TCell
Result: Positive
Host: M 48 years
Cell type: T cell CD4+
Tissue: other
Culture conditions: Cell Line / Clone

Epitope: TUBA1B S287T
Chemical type: Peptide, no natural source
Sequence: VISAEKAYHEQLTVAEITNACFEPA
Assay category: TCell
Result: Positive
Host: F 58 years
Cell type: T cell CD4+
Tissue: other
Culture conditions: Cell Line / Clone

Epitope: RAD51B L202R
Chemical type: Peptide, no natural source
Sequence: ILQYLDSERRQIRIAKSPLAPFTSF
Assay category: TCell
Result: Positive
Host: M 49 years
Cell type: T cell CD4+
Tissue: other
Culture conditions: Cell Line / Clone