LiteFold/IEDB huggingface dataset:
Reference: Aparna Shetty; Sheena G Gupta; Michel Varrin-Doyer; Martin S Weber; Thomas Prod'homme; Nicolas Molnarfi; Niannian Ji; Patricia A Nelson; Juan C Patarroyo; Ulf Schulze-Topphoff; Stephen E Fogal; Thomas Forsthuber; Raymond A Sobel; Claude C A Bernard; Anthony J Slavin; Scott S Zamvil. "Immunodominant T-cell epitopes of MOG reside in its transmembrane and cytoplasmic domains in EAE." Neurology® neuroimmunology & neuroinflammation (2014).

Epitope: MOG (1-20)
Chemical type: Peptide from protein
Sequence: GQFRVIGPRHPIRALVGDEA
Assay category: TCell
Result: Negative
Host: F 5-8 weeks

Epitope: MOG (1-20)
Chemical type: Peptide from protein
Sequence: GQFRVIGPRHPIRALVGDEA
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG (91-110)
Chemical type: Peptide from protein
Sequence: SDEGGYTCFFRDHSYQEEAA
Position: 91-110
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks

Epitope: MOG (91-110)
Chemical type: Peptide from protein
Sequence: SDEGGYTCFFRDHSYQEEAA
Position: 91-110
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: MOG (142-160)
Chemical type: Peptide from protein
Sequence: VGLVFLFLQHRLRGKLRAE
Position: 142-160
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks

Epitope: MOG (142-160)
Chemical type: Peptide from protein
Sequence: VGLVFLFLQHRLRGKLRAE
Position: 142-160
Source molecule (GenBank): AAA03180.1
Assay category: TCell
Result: Negative
Host: F 5-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Agnieszka K Grabowska; Andreas M Kaufmann; Angelika B Riemer. "Identification of promiscuous HPV16-derived T helper cell epitopes for therapeutic HPV vaccine design." International journal of cancer. Journal international du cancer (2015).

Epitope: E7/73-87
Chemical type: Peptide from protein
Sequence: HVDIRTLEDLLMGTL
Position: 73-87
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Positive
MHC allele types: 350 341 340 327 352 333 330 336 430 355
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Ines A Ehrnstorfer; Eric R Geertsma; Els Pardon; Jan Steyaert; Raimund Dutzler. "Crystal structure of a SLC11 (NRAMP) transporter reveals the basis for transition-metal ion transport." Nature structural & molecular biology (2014).

Epitope: Epitope of nanobody on ScaDMT
Chemical type: Discontinuous protein residues
Discontinuous residues: D136, L137, I138, G140, A281, L282, F283, F284, G285, T286, T288, D290, Y295, D296, Y298, H299, A300, K302, T303, N377, S378
Source molecule (GenBank): WP_023350460.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.1

Epitope: Epitope of nanobody on ScaDMT
Chemical type: Discontinuous protein residues
Discontinuous residues: D136, L137, I138, G140, A281, L282, F283, F284, G285, T286, T288, D290, Y295, D296, Y298, H299, A300, K302, T303, N377, S378
Source molecule (GenBank): WP_023350460.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.4

Epitope: Epitope of nanobody on ScaDMT
Chemical type: Discontinuous protein residues
Discontinuous residues: D136, L137, I138, G140, A281, L282, F283, F284, G285, T286, T288, D290, Y295, D296, Y298, H299, A300, K302, T303, N377, S378
Source molecule (GenBank): WP_023350460.1
Assay category: BCell
Result: Positive
Reference: Sandra Pahr; Regina Selb; Milena Weber; Margarete Focke-Tejkl; Gerhard Hofer; Andela Dordić; Walter Keller; Nikolaos G Papadopoulos; Stavroula Giavi; Mika Mäkelä; Anna Pelkonen; Verena Niederberger; Susanne Vrtala; Rudolf Valenta. "Biochemical, biophysical and IgE-epitope characterization of the wheat food allergen, Tri a 37." PloS one (2014).

Epitope: Tri a 37 P1
Chemical type: Peptide from protein
Sequence: KSCCRSTLGRNCYNLCRARGAQKLCAGVCR
Position: 2-31
Source molecule (GenBank): AFQ60540.1
Assay category: BCell
Result: Positive
Host:  3-41 years

Epitope: Tri a 37 P1
Chemical type: Peptide from protein
Sequence: KSCCRSTLGRNCYNLCRARGAQKLCAGVCR
Position: 2-31
Source molecule (GenBank): AFQ60540.1
Assay category: BCell
Result: Negative

Epitope: Tri a 37 P1
Chemical type: Peptide from protein
Sequence: KSCCRSTLGRNCYNLCRARGAQKLCAGVCR
Position: 2-31
Source molecule (GenBank): AFQ60540.1
Assay category: BCell
Result: Positive
Reference: Ofer Cohen; Adva Mechaly; Tamar Sabo; Ron Alcalay; Ronit Aloni-Grinstein; Nehama Seliger; Chanoch Kronman; Ohad Mazor. "Characterization and epitope mapping of the polyclonal antibody repertoire elicited by ricin holotoxin-based vaccination." Clinical and vaccine immunology :  CVI. (2014).

Epitope: RTA (262-267)
Chemical type: Peptide from protein
Sequence: PPSSQF
Position: 297-302
Source molecule (GenBank): P02879.1
Assay category: BCell
Result: Positive-Low

Epitope: Epitope 1
Chemical type: Peptide, no natural source
Sequence: VPVLPNR
Assay category: BCell
Result: Positive
Reference: Dongliang Liu; Yang Li; Jing Zhao; Fei Deng; Xiaomei Duan; Chun Kou; Ting Wu; Yijie Li; Yongxing Wang; Ji Ma; Jianhua Yang; Zhihong Hu; Fuchun Zhang; Yujiang Zhang; Surong Sun. "Fine epitope mapping of the central immunodominant region of nucleoprotein from Crimean-Congo hemorrhagic fever virus (CCHFV)." PloS one (2014).

Epitope: CCHFV NP P1
Chemical type: Peptide from protein
Sequence: KLAETEGK
Position: 237-244
Source molecule (GenBank): ACM78470.1
Assay category: BCell
Result: Negative

Epitope: CCHFV NP P29
Chemical type: Peptide from protein
Sequence: DEVDKASA
Position: 266-273
Source molecule (GenBank): ACM78470.1
Assay category: BCell
Result: Positive-Low

Epitope: CCHFV vE1
Chemical type: Peptide from protein
Sequence: FDEAKR
Position: 247-252
Source molecule (GenBank): AAQ23152.2
Assay category: BCell
Result: Positive
Reference: A Gilhar; M Landau; B Assy; R Shalaginov; S Serafimovich; R S Kalish. "Melanocyte-associated T cell epitopes can function as autoantigens for transfer of alopecia areata to human scalp explants on Prkdc(scid) mice." The Journal of investigative dermatology (2001).

Epitope: MART-1 (27-35)
Chemical type: Peptide from protein
Sequence: AAGIGILTV
Position: 27-35
Source molecule (GenBank): Q16655.1
Assay category: TCell
Result: Positive
Host:  22-39
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Short Term Restimulated

Epitope: MART-1 (27-35)
Chemical type: Peptide from protein
Sequence: AAGIGILTV
Position: 27-35
Source molecule (GenBank): Q16655.1
Assay category: TCell
Result: Positive-High
Host:  22-39
Cell type: T cell CD4+
Tissue: skin
Culture conditions: Short Term Restimulated

Epitope: gp100 (209-217)
Chemical type: Peptide from protein
Sequence: ITDQVPFSV
Position: 209-217
Source molecule (GenBank): AAB31176.1
Assay category: TCell
Result: Positive-High
Host:  22-39
Cell type: T cell CD4+
Tissue: skin
Culture conditions: Short Term Restimulated

Epitope: gp100 (209-217)
Chemical type: Peptide from protein
Sequence: ITDQVPFSV
Position: 209-217
Source molecule (GenBank): AAB31176.1
Assay category: TCell
Result: Positive
Host:  22-39
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Short Term Restimulated
Reference: Ulrike Erb; Pia Freyschmidt-Paul; Margot Zöller. "Tolerance induction by hair-specific keratins in murine alopecia areata." Journal of leukocyte biology (2013).

Epitope: K16-168
Chemical type: Peptide from protein
Sequence: EDLKSKIII
Position: 168-176
Source molecule (GenBank): NP_032496.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K16-168
Chemical type: Peptide from protein
Sequence: EDLKSKIII
Position: 168-176
Source molecule (GenBank): NP_032496.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K31-211
Chemical type: Peptide from protein
Sequence: VEVDAAPTV
Position: 211-219
Source molecule (GenBank): NP_034789.2
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K71-242
Chemical type: Peptide from protein
Sequence: VDAAYANKV
Position: 242-250
Source molecule (GenBank): NP_064340.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K31-204
Chemical type: Peptide from protein
Sequence: QLGDRLNVEVDAAPT
Position: 204-218
Source molecule (GenBank): NP_034789.2
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K35-335
Chemical type: Peptide from protein
Sequence: DALDSTLAETEGRYS
Position: 98-112
Source molecule (GenBank): EDL02582.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K35-335
Chemical type: Peptide from protein
Sequence: DALDSTLAETEGRYS
Position: 98-112
Source molecule (GenBank): EDL02582.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K82-281
Chemical type: Peptide from protein
Sequence: LDVDGIVAEIKAQYD
Position: 281-295
Source molecule (GenBank): NP_444479.2
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K82-281
Chemical type: Peptide from protein
Sequence: LDVDGIVAEIKAQYD
Position: 281-295
Source molecule (GenBank): NP_444479.2
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Short Term Restimulated

Epitope: K71-382
Chemical type: Peptide from protein
Sequence: QRGDSALKDARAKLD
Position: 382-396
Source molecule (GenBank): NP_064340.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Short Term Restimulated
Reference: Charles D Murin; Marnie L Fusco; Zachary A Bornholdt; Xiangguo Qiu; Gene G Olinger; Larry Zeitlin; Gary P Kobinger; Andrew B Ward; Erica Ollmann Saphire. "Structures of protective antibodies reveal sites of vulnerability on Ebola virus." Proceedings of the National Academy of Sciences of the United States of America (2014).

Epitope: mAbs 2G4, 4G7, KZ52
Chemical type: Discontinuous protein residues
Discontinuous residues: Q508
Source molecule (GenBank): AAG40168.1
Assay category: BCell
Result: Positive

Epitope: mAbs 2G4, 4G7, KZ52
Chemical type: Discontinuous protein residues
Discontinuous residues: Q508
Source molecule (GenBank): AAG40168.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: mAbs 2G4, 4G7, KZ52
Chemical type: Discontinuous protein residues
Discontinuous residues: Q508
Source molecule (GenBank): AAG40168.1
Assay category: BCell
Result: Positive
Reference: Leo Swadling; Stefania Capone; Richard D Antrobus; Anthony Brown; Rachel Richardson; Evan W Newell; John Halliday; Christabel Kelly; Dan Bowen; Joannah Fergusson; Ayako Kurioka; Virginia Ammendola; Mariarosaria Del Sorbo; Fabiana Grazioli; Maria Luisa Esposito; Loredana Siani; Cinzia Traboni; Adrian Hill; Stefano Colloca; Mark Davis; Alfredo Nicosia; Riccardo Cortese; Antonella Folgori; Paul Klenerman; Eleanor Barnes. "A human vaccine strategy based on chimpanzee adenoviral and MVA vectors that primes, boosts, and sustains functional HCV-specific T cell memory." Science translational medicine (2014).

Epitope: HCV P7
Chemical type: Peptide from protein
Sequence: PLLYRLGAVQN
Position: 1623-1633
Source molecule (GenBank): AAA72945.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Jonathan Audet; Gary Wong; Han Wang; Guangwen Lu; George F Gao; Gary Kobinger; Xiangguo Qiu. "Molecular characterization of the monoclonal antibodies composing ZMAb: a protective cocktail against Ebola virus." Scientific reports (2014).

Epitope: mAb 1H3
Chemical type: Discontinuous protein residues
Discontinuous residues: I274
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Negative
Host:  6-8 weeks

Epitope: mAb 1H3
Chemical type: Discontinuous protein residues
Discontinuous residues: I274
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Negative
Host:  6-8 weeks

Epitope: mAb 1H3
Chemical type: Discontinuous protein residues
Discontinuous residues: I274
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive
Host:  6-8 weeks

Epitope: mAb 1H3
Chemical type: Discontinuous protein residues
Discontinuous residues: I274
Source molecule (GenBank): NP_066246.1
Assay category: BCell
Result: Positive
Quantitative measurement: 211.0
Host:  6-8 weeks
Reference: John P O'Rourke; Seth M Daly; Kathleen D Triplett; David Peabody; Bryce Chackerian; Pamela R Hall. "Development of a mimotope vaccine targeting the Staphylococcus aureus quorum sensing pathway." PloS one (2014).

Epitope: Peptide 6
Chemical type: Peptide, no natural source
Sequence: GGYSLK
Assay category: BCell
Result: Positive
Reference: Saeyoung Park; Sabina Gerber; Jean C Lee. "Antibodies to Staphylococcus aureus serotype 8 capsular polysaccharide react with and protect against serotype 5 and 8 isolates." Infection and immunity (2014).

Epitope: de-O-acetylated S. aureus serotype 8 capsular polysaccharide
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: de-O-acetylated S. aureus serotype 8 capsular polysaccharide
Chemical type: Carbohydrate
Assay category: BCell
Result: Negative
Epitope: VZV-ORF18 (141-153)
Chemical type: Peptide from protein
Sequence: KVRDNPSVAEKYI
Position: 141-153
Source molecule (GenBank): AAY57705.1
Assay category: TCell
Result: Positive
Quantitative measurement: 16745.0
MHC allele types: 413 418 363 316 321 67 76
Host:  >50 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Epitope: D13L 278-290
Chemical type: Peptide from protein
Sequence: QDEKDYIDAYVSR
Position: 278-290
Source molecule (GenBank): AAA48114.1
Assay category: TCell
Result: Positive
Host: F 40-50 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Yves Bourne; Ludovic Renault; Pascale Marchot. "Crystal structure of snake venom acetylcholinesterase in complex with inhibitory antibody fragment Fab410 bound at the peripheral site: evidence for open and closed states of a back door channel." The Journal of biological chemistry (2015).

Epitope: Fab410 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D103, T104, S105, Y106, P107, G108, Q110, E113, P117, Q303, D307, K372, D373
Source molecule (GenBank): Q92035.2
Assay category: BCell
Result: Positive
Quantitative measurement: 33.4
Host:  8 weeks

Epitope: Fab410 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D103, T104, S105, Y106, P107, G108, Q110, E113, P117, Q303, D307, K372, D373
Source molecule (GenBank): Q92035.2
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7
Host:  8 weeks
Reference: Valeria Longo; Maria Assunta Costa; Fabio Cibella; Giuseppina Cuttitta; Stefania La Grutta; Paolo Colombo. "Multiple IgE recognition on the major allergen of the Parietaria pollen Par j 2." Molecular immunology (2015).

Epitope: Par j 2 1-30 fragment A
Chemical type: Peptide from protein
Sequence: EEACGKVVQDIMPCLHFVKGEEKEPSKECC
Position: 32-61
Source molecule (GenBank): CAA65121.1
Assay category: BCell
Result: Positive
Host:  10-17 years
Reference: Monica Schaller; Monique Vogel; Karim Kentouche; Bernhard Lämmle; Johanna A Kremer Hovinga. "The splenic autoimmune response to ADAMTS13 in thrombotic thrombocytopenic purpura contains recurrent antigen-binding CDR3 motifs." Blood (2014).

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.0

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.8

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.1

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.6

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 9.5

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 9.0

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.27

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 47.0

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 4.6

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 25.0

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Quantitative measurement: 92.0

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive

Epitope: Group 1 (595-605)
Chemical type: Peptide from protein
Sequence: AVRIGGRYVV
Position: 266-275
Source molecule (GenBank): EAW88083.1
Assay category: BCell
Result: Positive
Reference: Selin Agca; Gunnar Houen; Nicole Hartwig Trier. "Characterization of continuous B-cell epitopes in the N-terminus of glutamate decarboxylase67 using monoclonal antibodies." Journal of peptide science : an official publication of the European Peptide Society (2014).

Epitope: GAD67 (91-99)
Chemical type: Peptide from protein
Sequence: TETDFSNLF
Position: 91-99
Source molecule (GenBank): Q99259.1
Assay category: BCell
Result: Positive
Reference: Minako Oshima; K Roger Aoki; M Zouhair Atassi. "Regions recognized on the light chain of botulinum neurotoxin type A by T lymphocytes of SJL and BALB/c mice primed with inactivated toxin." Immunobiology (2014).

Epitope: L8
Chemical type: Peptide from protein
Sequence: YSTDLGRMLLTSIVRGIPF
Position: 99-117
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L8
Chemical type: Peptide from protein
Sequence: YSTDLGRMLLTSIVRGIPF
Position: 99-117
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L22
Chemical type: Peptide from protein
Sequence: STLNKAKSIVGTTASLQYM
Position: 295-313
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L22
Chemical type: Peptide from protein
Sequence: STLNKAKSIVGTTASLQYM
Position: 295-313
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L28
Chemical type: Peptide from protein
Sequence: VPKVNYTIYDGFNLRNTNL
Position: 379-397
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L28
Chemical type: Peptide from protein
Sequence: VPKVNYTIYDGFNLRNTNL
Position: 379-397
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L29
Chemical type: Peptide from protein
Sequence: RNTNLAANFNGQNTEINNM
Position: 393-411
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Negative
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L29
Chemical type: Peptide from protein
Sequence: RNTNLAANFNGQNTEINNM
Position: 393-411
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Positive-Low
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L31
Chemical type: Peptide from protein
Sequence: GLFEFYKLLCVRGIITSKT
Position: 421-439
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Positive-Low
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo

Epitope: L31
Chemical type: Peptide from protein
Sequence: GLFEFYKLLCVRGIITSKT
Position: 421-439
Source molecule (GenBank): P10845.4
Assay category: TCell
Result: Positive
Host: F 7-8 weeks
Cell type: lymph node cells
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Michael L Freeman; Claire E Burkum; Tres Cookenham; Alan D Roberts; Kathleen G Lanzer; Gail E Huston; Meghan K Jensen; John Sidney; Bjoern Peters; Jacob E Kohlmeier; David L Woodland; Linda F van Dyk; Alessandro Sette; Marcia A Blackman. "CD4 T cells specific for a latency-associated γ-herpesvirus epitope are polyfunctional and cytotoxic." Journal of immunology (Baltimore, Md. : 1950) (2014).

Epitope: ORF45 (183–197)
Chemical type: Peptide from protein
Sequence: ESSRILKTPAPISGN
Position: 183-197
Source molecule (GenBank): NP_044882.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ORF45 (183–197)
Chemical type: Peptide from protein
Sequence: ESSRILKTPAPISGN
Position: 183-197
Source molecule (GenBank): NP_044882.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Jason Alexander Ji-Xhin Wong; Rakesh Bhat; Darren Hockman; Michael Logan; Chao Chen; Aviad Levin; Sharon E Frey; Robert B Belshe; D Lorne Tyrrell; John Lok Man Law; Michael Houghton. "Recombinant hepatitis C virus envelope glycoprotein vaccine elicits antibodies targeting multiple epitopes on the envelope glycoproteins associated with broad cross-neutralization." Journal of virology (2014).

Epitope: E2 (433-447)
Chemical type: Peptide from protein
Sequence: LNTGWLAGLFYHHKF
Position: 433-447
Source molecule (GenBank): AAA45676.1
Assay category: BCell
Result: Positive-High

Epitope: HC84.26 (mAb for E2)
Chemical type: Discontinuous protein residues
Discontinuous residues: C429, L441, F442, K446, W616
Source molecule (GenBank): AAB66324.1
Assay category: BCell
Result: Positive

Epitope: HC84.26 (mAb for E2)
Chemical type: Discontinuous protein residues
Discontinuous residues: C429, L441, F442, K446, W616
Source molecule (GenBank): AAB66324.1
Assay category: BCell
Result: Positive

Epitope: HC84.26 (mAb for E2)
Chemical type: Discontinuous protein residues
Discontinuous residues: C429, L441, F442, K446, W616
Source molecule (GenBank): AAB66324.1
Assay category: BCell
Result: Positive