LiteFold/IEDB huggingface dataset:
Reference: Hongbing Yang; Hong Sun; Simon Brackenridge; Xiaodong Zhuang; Peter A C Wing; Max Quastel; Lucy Walters; Lee Garner; Beibei Wang; Xuan Yao; Suet Ling Felce; Yanchun Peng; Shona Moore; Bas W A Peeters; Margarida Rei; Joao Canto Gomes; Ana Tomas; Andrew Davidson; Malcolm G Semple; Lance C W Turtle; Peter J M Openshaw; J Kenneth Baillie; Alexander J Mentzer; Paul Klenerman; Persephone Borrow; Tao Dong; Jane A McKeating; Geraldine M Gillespie; Andrew J McMichael. "HLA-E-restricted SARS-CoV-2-specific T cells from convalescent COVID-19 patients suppress virus replication despite HLA class Ia down-regulation." Science immunology (2023).

Epitope: P013
Chemical type: Peptide from protein
Sequence: AMYTPHTVL
Position: 5315-5323
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P013
Chemical type: Peptide from protein
Sequence: AMYTPHTVL
Position: 5315-5323
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive

Epitope: P009
Chemical type: Peptide from protein
Sequence: YMPASWVMR
Position: 3654-3662
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Negative
Reference: Yury Patskovsky; Aswin Natarajan; Larysa Patskovska; Samantha Nyovanie; Bishnu Joshi; Benjamin Morin; Christine Brittsan; Olivia Huber; Samuel Gordon; Xavier Michelet; Florian Schmitzberger; Robert B Stein; Mark A Findeis; Andy Hurwitz; Marc Van Dijk; Eleni Chantzoura; Alvaro S Yague; Daniel Pollack Smith; Jennifer S Buell; Dennis Underwood; Michelle Krogsgaard. "Molecular mechanism of phosphopeptide neoantigen immunogenicity." Nature communications (2023).

Epitope: DOT1L 998-1006
Chemical type: Peptide from protein
Sequence: LPASPAHQL
Position: 998-1006
Source molecule (GenBank): Q8TEK3.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 54.3

Epitope: DOT1L 998-1006
Chemical type: Peptide from protein
Sequence: LPASPAHQL
Position: 998-1006
Source molecule (GenBank): Q8TEK3.3
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.04

Epitope: EPRCPSHSM
Chemical type: Peptide, no natural source
Sequence: EPRCPSHSM
Assay category: MhcBinding
Result: Positive
Reference: Mengjun Li; Zuning Ren; Yuelin Wang; Yushan Jiang; Minghui Yang; Delin Li; Jiayin Chen; Zuxin Liang; Yuhao Lin; Zhujun Zeng; Rui Xu; Yiting Wang; Li Zhu; Weiwei Xiao; Qinghua Wu; Bao Zhang; Chengsong Wan; Yang Yang; Bo Wu; Jie Peng; Wei Zhao; Chenguang Shen. "Three neutralizing mAbs induced by MPXV A29L protein recognizing different epitopes act synergistically against orthopoxvirus." Emerging microbes & infections (2023).

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive-Low
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive-Low
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: A29L protein 17-49
Chemical type: Peptide from protein
Sequence: TEFFSTKAAKNPETKREAIVKAYGDDNEETLKQ
Position: 17-49
Source molecule (GenBank): YP_010377135.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Epitope: oxidoreductase -P3
Chemical type: Peptide from protein
Sequence: LPPGSAVIIFTPDTTHYPIA
Position: 111-130
Source molecule (GenBank): XP_045272313.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HP7-P1-300049
Chemical type: Peptide from protein
Sequence: RADLGSAFVFVYCNFSVALDIQAGETS
Position: 27-53
Source molecule (GenBank): AAF86481.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Siddhartha Sharma; Xuqian Tan; Josh Boyer; Don Clarke; Anne Costanzo; Brian Abe; Lisa Kain; Marie Holt; Adrienne Armstrong; Marynette Rihanek; Andrew Su; Cate Speake; Peter Gottlieb; Michael Gottschalk; Jeremy Pettus; Luc Teyton. "Measuring anti-islet autoimmunity in mouse and human by profiling peripheral blood antigen-specific CD4 T cells." Science translational medicine (2023).

Epitope: Ins 12-20
Chemical type: Peptide from protein
Sequence: VEALYLVCG
Position: 36-44
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Ins 12-20
Chemical type: Peptide from protein
Sequence: VEALYLVCG
Position: 36-44
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  26-57 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Ins 12-20
Chemical type: Peptide from protein
Sequence: VEALYLVCG
Position: 36-44
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  5-62 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Ins 12-20
Chemical type: Peptide from protein
Sequence: VEALYLVCG
Position: 36-44
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  16-21 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP 65-75
Chemical type: Peptide from protein
Sequence: QVELGGGPGAG
Position: 65-75
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  26-57 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP 65-75
Chemical type: Peptide from protein
Sequence: QVELGGGPGAG
Position: 65-75
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  5-62 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP 65-75
Chemical type: Peptide from protein
Sequence: QVELGGGPGAG
Position: 65-75
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Host:  16-21 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Henrick Riemenschneider; Francesca Simonetti; Udit Sheth; Eszter Katona; Stefan Roth; Saskia Hutten; Daniel Farny; Meike Michaelsen; Brigitte Nuscher; Michael K Schmidt; Andrew Flatley; Aloys Schepers; Lara A Gruijs da Silva; Qihui Zhou; Thomas Klopstock; Arthur Liesz; Thomas Arzberger; Jochen Herms; Regina Feederle; Tania F Gendron; Dorothee Dormann; Dieter Edbauer. "Targeting the glycine-rich domain of TDP-43 with antibodies prevents its aggregation in vitro and reduces neurofilament levels in vivo." Acta neuropathologica communications (2023).

Epitope: Peptide#10
Chemical type: Peptide from protein
Sequence: SNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGG
Position: 258-296
Source molecule (GenBank): Q13148.1
Assay category: BCell
Result: Positive
Host:  8 weeks
Reference: Hannes Vietzen; Philipp B Staber; Sarah M Berger; Philippe L Furlano; Laura M Kühner; Simone Lubowitzki; Alexander Pichler; Robert Strassl; Jan J Cornelissen; Elisabeth Puchhammer-Stöckl. "Inhibitory NKG2A<sup>+</sup> and absent activating NKG2C<sup>+</sup> NK cell responses are associated with the development of EBV<sup>+</sup> lymphomas." Frontiers in immunology (2023).

Epitope: GAGPHLPTL
Chemical type: Peptide from protein
Sequence: GAGPHLPTL
Assay category: MhcBinding
Result: Positive-Intermediate
Reference: René Arredondo-Hernández; Alejandro Schcolnik-Cabrera; Patricia Orduña; Daniel Juárez-López; Tania Varela-Salinas; Yolanda López-Vidal. "Identification of peptides presented through the MHC-II of dendritic cells stimulated with Mycobacterium avium." Immunobiology (2023).

Epitope: Peptide C
Chemical type: Peptide from protein
Sequence: RDSRVDKLLLLLRLVDRNRSLRRS
Assay category: MhcLigandElution
Result: Positive
Reference: Matthew C Metcalf; Benjamin M Janus; Rui Yin; Ruixue Wang; Johnathan D Guest; Edwin Pozharski; Mansun Law; Roy A Mariuzza; Eric A Toth; Brian G Pierce; Thomas R Fuerst; Gilad Ofek. "Structure of engineered hepatitis C virus E1E2 ectodomain in complex with neutralizing antibodies." Nature communications (2023).

Epitope: Epitope of Fab AR4A on HCV 1b E1E2
Chemical type: Discontinuous protein residues
Discontinuous residues: I626, F627, W646, R648, E650, L667, E671, N695, I696, V697, D698, V699
Source molecule (GenBank): W5RMK0.1
Assay category: BCell
Result: Positive
Reference: Zhiwen Xu; Hira Lal Goel; Christoph Burkart; Luke Burman; Yeeting E Chong; Alison G Barber; Yanyan Geng; Liting Zhai; Mengdie Wang; Ayush Kumar; Ann Menefee; Clara Polizzi; Lisa Eide; Kaitlyn Rauch; Justin Rahman; Kristina Hamel; Zachary Fogassy; Sofia Klopp-Savino; Suzanne Paz; Mingjie Zhang; Andrea Cubitt; Leslie A Nangle; Arthur M Mercurio. "Inhibition of VEGF binding to neuropilin-2 enhances chemosensitivity and inhibits metastasis in triple-negative breast cancer." Science translational medicine (2023).

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive
Quantitative measurement: 1370000.0

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0000399

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0271

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive

Epitope: Epitope of aNRP2-10 Fab on Neuropilin-2
Chemical type: Discontinuous protein residues
Discontinuous residues: Y299, S300, D301, T319, D323, R350, E351, T352, Q353, N354, G355, Y356, Y357, K359, W414, H415, S416, G417, I418
Source molecule (GenBank): NP_003863.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.21
Reference: Ryan Cordner; Michelle Jhun; Akanksha Panwar; HongQiang Wang; Nicole Gull; Ramachandran Murali; Joseph H McAbee; Armen Mardiros; Akane Sanchez-Takei; Mia W Mazer; Xuemo Fan; Emmanuel Jouanneau; John S Yu; Keith L Black; Christopher J Wheeler. "Glioma immunotherapy enhancement and CD8-specific sialic acid cleavage by isocitrate dehydrogenase (IDH)-1." Oncogene (2023).

Epitope: MAGE A1
Chemical type: Peptide from protein
Sequence: KVLEYVIKV
Position: 278-286
Source molecule (GenBank): P43355.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Yi Ru; Rongzeng Hao; Chunping Wu; Yajun Li; Bingzhou Lu; Huanan Liu; Hong Tian; Dan Li; Zhengwang Shi; Juncong Luo; Kun Ma; Guicai Zhang; Xiangtao Liu; Haixue Zheng. "Identification of Potential Novel B-Cell Epitopes of Capsid Protein VP2 in Senecavirus A." Microbiology spectrum (2023).

Epitope: P9
Chemical type: Peptide from protein
Sequence: TGRLNSWTKAVKTFSF
Position: 215-230
Source molecule (GenBank): ARR73599.1
Assay category: BCell
Result: Negative

Epitope: P9
Chemical type: Peptide from protein
Sequence: TGRLNSWTKAVKTFSF
Position: 215-230
Source molecule (GenBank): ARR73599.1
Assay category: BCell
Result: Negative

Epitope: P15
Chemical type: Peptide from protein
Sequence: CGWQVQVQCNLTQFHQ
Position: 263-278
Source molecule (GenBank): ARR73599.1
Assay category: BCell
Result: Negative

Epitope: P15
Chemical type: Peptide from protein
Sequence: CGWQVQVQCNLTQFHQ
Position: 263-278
Source molecule (GenBank): ARR73599.1
Assay category: BCell
Result: Negative

Epitope: P16
Chemical type: Peptide from protein
Sequence: CNLTQFHQGALLVAMV
Position: 271-286
Source molecule (GenBank): ARR73599.1
Assay category: BCell
Result: Negative

Epitope: P16
Chemical type: Peptide from protein
Sequence: CNLTQFHQGALLVAMV
Position: 271-286
Source molecule (GenBank): ARR73599.1
Assay category: BCell
Result: Negative
Reference: Akira Iizuka; Yasuto Akiyama; Naoki Sakura; Akari Kanematsu; Yasufumi Kikuchi; Takeshi Nagashima; Kenichi Urakami; Yuji Shimoda; Keiichi Ohshima; Akio Shiomi; Yasuhisa Ohde; Masanori Terashima; Katsuhiko Uesaka; Takashi Mukaigawa; Yasuyuki Hirashima; Shusuke Yoshikawa; Hirohisa Katagiri; Takashi Sugino; Mitsuru Takahashi; Hirotsugu Kenmotsu; Ken Yamaguchi. "Generation of novel complete HLA class I monoallelic cell lines used in an MHC stabilization assay for neoantigen evaluation." Oncology letters (2023).

Epitope: 1
Chemical type: Peptide, no natural source
Sequence: KLVVVGADGV
Assay category: MhcBinding
Result: Negative

Epitope: 1
Chemical type: Peptide, no natural source
Sequence: KLVVVGADGV
Assay category: MhcBinding
Result: Negative

Epitope: 1
Chemical type: Peptide, no natural source
Sequence: KLVVVGADGV
Assay category: MhcBinding
Result: Positive

Epitope: 13
Chemical type: Peptide, no natural source
Sequence: LVVVGACGV
Assay category: MhcBinding
Result: Negative

Epitope: 27
Chemical type: Peptide, no natural source
Sequence: VVVGARGVGK
Assay category: MhcBinding
Result: Negative

Epitope: 27
Chemical type: Peptide, no natural source
Sequence: VVVGARGVGK
Assay category: MhcBinding
Result: Positive

Epitope: 35
Chemical type: Peptide, no natural source
Sequence: RVCACPGRDWR
Assay category: MhcBinding
Result: Negative

Epitope: 35
Chemical type: Peptide, no natural source
Sequence: RVCACPGRDWR
Assay category: MhcBinding
Result: Positive

Epitope: 40
Chemical type: Peptide, no natural source
Sequence: MNQRPILTII
Assay category: MhcBinding
Result: Negative

Epitope: 49
Chemical type: Peptide, no natural source
Sequence: NWRPILTII
Assay category: MhcBinding
Result: Positive

Epitope: 50
Chemical type: Peptide, no natural source
Sequence: VVPCEPPEV
Assay category: MhcBinding
Result: Positive

Epitope: 56
Chemical type: Peptide, no natural source
Sequence: NSSCMGDMNR
Assay category: MhcBinding
Result: Negative

Epitope: 56
Chemical type: Peptide, no natural source
Sequence: NSSCMGDMNR
Assay category: MhcBinding
Result: Negative

Epitope: 57
Chemical type: Peptide, no natural source
Sequence: SSCMGDMNR
Assay category: MhcBinding
Result: Negative

Epitope: 57
Chemical type: Peptide, no natural source
Sequence: SSCMGDMNR
Assay category: MhcBinding
Result: Positive

Epitope: 58
Chemical type: Peptide, no natural source
Sequence: EVVRRCPHR
Assay category: MhcBinding
Result: Positive

Epitope: 103
Chemical type: Peptide, no natural source
Sequence: QLIMQLMPF
Assay category: MhcBinding
Result: Negative

Epitope: 103
Chemical type: Peptide, no natural source
Sequence: QLIMQLMPF
Assay category: MhcBinding
Result: Positive
Reference: Pu Chen; Dongbo Chen; Dechao Bu; Jie Gao; Wanying Qin; Kangjian Deng; Liying Ren; Shaoping She; Wentao Xu; Yao Yang; Xingwang Xie; Weijia Liao; Hongsong Chen. "Dominant neoantigen verification in hepatocellular carcinoma by a single-plasmid system coexpressing patient HLA and antigen." Journal for immunotherapy of cancer (2023).

Epitope: CTAYMQMLR
Chemical type: Peptide, no natural source
Sequence: CTAYMQMLR
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ASIRVALSRK
Chemical type: Peptide, no natural source
Sequence: ASIRVALSRK
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ASSSSCQLK
Chemical type: Peptide, no natural source
Sequence: ASSSSCQLK
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SSSCQLKHK
Chemical type: Peptide, no natural source
Sequence: SSSCQLKHK
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VSTVWSVIK
Chemical type: Peptide, no natural source
Sequence: VSTVWSVIK
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MMSGEPLYVK
Chemical type: Peptide, no natural source
Sequence: MMSGEPLYVK
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: TAMCFHPHR
Chemical type: Peptide, no natural source
Sequence: TAMCFHPHR
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VTAMCFHPHR
Chemical type: Peptide, no natural source
Sequence: VTAMCFHPHR
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Wei Shi; Zhenzhen Tong; Qianqian Qiu; Na Yue; Weiwei Guo; Feng Zou; Daoguang Zhou; Jiuhui Li; Wenlong Huang; Hai Qian. "Novel HLA-A2 restricted antigenic peptide derivatives with high affinity for the treatment of breast cancer expressing NY-ESO-1." Bioorganic chemistry (2020).

Epitope: II-13
Chemical type: Peptide, no natural source
Sequence: SLSLLMWIT
Assay category: MhcBinding
Result: Positive

Epitope: II-14
Chemical type: Peptide, no natural source
Sequence: TLSLLMWIT
Assay category: MhcBinding
Result: Positive
Reference: Danillo G Augusto; Lawton D Murdolo; Demetra S M Chatzileontiadou; Joseph J Sabatino; Tasneem Yusufali; Noah D Peyser; Xochitl Butcher; Kerry Kizer; Karoline Guthrie; Victoria W Murray; Vivian Pae; Sannidhi Sarvadhavabhatla; Fiona Beltran; Gurjot S Gill; Kara L Lynch; Cassandra Yun; Colin T Maguire; Michael J Peluso; Rebecca Hoh; Timothy J Henrich; Steven G Deeks; Michelle Davidson; Scott Lu; Sarah A Goldberg; J Daniel Kelly; Jeffrey N Martin; Cynthia A Vierra-Green; Stephen R Spellman; David J Langton; Michael J Dewar-Oldis; Corey Smith; Peter J Barnard; Sulggi Lee; Gregory M Marcus; Jeffrey E Olgin; Mark J Pletcher; Martin Maiers; Stephanie Gras; Jill A Hollenbach. "A common allele of HLA is associated with asymptomatic SARS-CoV-2 infection." Nature (2023).

Epitope: CVADYSVLY
Chemical type: Peptide from protein
Sequence: CVADYSVLY
Position: 361-369
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Hui Sun; Tingting Deng; Yali Zhang; Yanling Lin; Yanan Jiang; Yichao Jiang; Yang Huang; Shuo Song; Lingyan Cui; Tingting Li; Hualong Xiong; Miaolin Lan; Liqin Liu; Yu Li; Qianjiao Fang; Kunyu Yu; Wenling Jiang; Lizhi Zhou; Yuqiong Que; Tianying Zhang; Quan Yuan; Tong Cheng; Zheng Zhang; Hai Yu; Jun Zhang; Wenxin Luo; Shaowei Li; Qingbing Zheng; Ying Gu; Ningshao Xia. "Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD." Protein & cell (2024).

Epitope: Epitope of Fab XMA01 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: L455, F456, A475, G485, F486, N487, Y489
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host:  33-71 years

Epitope: Epitope of Fab XMA01 on SARS-CoV2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: L455, F456, A475, G485, F486, N487, Y489
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Host:  33-71 years