LiteFold/IEDB huggingface dataset:
Reference: Iole Macchia; Valentina La Sorsa; Alessandra Ciervo; Irene Ruspantini; Donatella Negri; Martina Borghi; Maria Laura De Angelis; Francesca Luciani; Antonio Martina; Silvia Taglieri; Valentina Durastanti; Maria Concetta Altavista; Francesca Urbani; Fabiola Mancini. "T Cell Peptide Prediction, Immune Response, and Host-Pathogen Relationship in Vaccinated and Recovered from Mild COVID-19 Subjects." Biomolecules (2024).

Epitope: VV-11delta/o
Chemical type: Peptide from protein
Sequence: VLYQGVNCTEV
Position: 607-617
Source molecule (GenBank): UFO69279.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: VV-11delta/o
Chemical type: Peptide from protein
Sequence: VLYQGVNCTEV
Position: 608-618
Source molecule (GenBank): QWK65230.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Clint Vorauer; Camila Boniche-Alfaro; Taylor Murphree; Tsutomu Matsui; Thomas Weiss; Bettina C Fries; Miklos Guttman. "Direct Mapping of Polyclonal Epitopes in Serum by HDX-MS." Analytical chemistry (2024).

Epitope: SEB: 198-208
Chemical type: Peptide from protein
Sequence: YDMMPAPGDKF
Position: 225-235
Source molecule (GenBank): P01552.1
Assay category: BCell
Result: Positive

Epitope: SEB: 198-208
Chemical type: Peptide from protein
Sequence: YDMMPAPGDKF
Position: 225-235
Source molecule (GenBank): P01552.1
Assay category: BCell
Result: Positive

Epitope: SEB: 137-146
Chemical type: Peptide from protein
Sequence: FEDGKNLLSF
Position: 164-173
Source molecule (GenBank): P01552.1
Assay category: BCell
Result: Positive

Epitope: SEB: 137-146
Chemical type: Peptide from protein
Sequence: FEDGKNLLSF
Position: 164-173
Source molecule (GenBank): P01552.1
Assay category: BCell
Result: Positive
Reference: Lara Marcos-Silva; Sara Ricardo; Kowa Chen; Ola Blixt; Emma Arigi; Daniela Pereira; Estrid Høgdall; Ulla Mandel; Eric P Bennett; Sergey Y Vakhrushev; Leonor David; Henrik Clausen. "A novel monoclonal antibody to a defined peptide epitope in MUC16." Glycobiology (2015).

Epitope: Peptide 9
Chemical type: Peptide from protein
Sequence: ELSQLTNGIKELGPYTL
Position: 12479-12495
Source molecule (GenBank): NP_078966.2
Assay category: BCell
Result: Negative
Host: F

Epitope: Peptide 12
Chemical type: Peptide from protein
Sequence: GPYTLDRNSLYVNGFTH
Position: 12177-12193
Source molecule (GenBank): NP_078966.2
Assay category: BCell
Result: Negative
Host: F

Epitope: Peptide 14
Chemical type: Peptide from protein
Sequence: SLYVNGFTHQTSAPNTS
Position: 12810-12826
Source molecule (GenBank): NP_078966.2
Assay category: BCell
Result: Negative
Host: F

Epitope: Peptide 21
Chemical type: Peptide from protein
Sequence: SGTPSSLPSPTSAGPLL
Position: 12838-12854
Source molecule (GenBank): NP_078966.2
Assay category: BCell
Result: Negative
Host: F
Reference: Pushpak Bhattacharjee; Miha Pakusch; Matthew Lacorcia; Eleonora Tresoldi; Alan F Rubin; Abby Foster; Laura King; Chris Y Chiu; Thomas W H Kay; John A Karas; Fergus J Cameron; Stuart I Mannering. "Proinsulin C-peptide is a major source of HLA-DQ8 restricted hybrid insulin peptides recognized by human islet-infiltrating CD4<sup>+</sup> T cells." PNAS nexus (2024).

Epitope: HIP-D
Chemical type: Spliced peptide from proteins
Position: 63-72
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HIP-E
Chemical type: Spliced peptide from proteins
Position: 63-72
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HIP-E
Chemical type: Spliced peptide from proteins
Position: 63-72
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HIP-E
Chemical type: Spliced peptide from proteins
Position: 63-72
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HIP-I
Chemical type: Spliced peptide from proteins
Position: 77-86
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HIP-I
Chemical type: Spliced peptide from proteins
Position: 77-86
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: HIP-I
Chemical type: Spliced peptide from proteins
Position: 77-86
Source molecule (GenBank): P01308.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Soyoko Morimoto; Yukie Tanaka; Jun Nakata; Fumihiro Fujiki; Kana Hasegawa; Hiroko Nakajima; Sumiyuki Nishida; Akihiro Tsuboi; Naoki Hosen; Naoki Kagawa; Motohiko Maruno; Akira Myoui; Takayuki Enomoto; Shuichi Izumoto; Mitsugu Sekimoto; Naoya Hashimoto; Toshiki Yoshimine; Atsushi Kumanogoh; Yusuke Oji; Yoshihiro Oka; Haruo Sugiyama. "Spontaneous high clonal expansion of Wilms' tumor gene 1-specific cytotoxic T-lymphocytes in patients with Wilms' tumor gene 1-expressing solid tumor." Cancer immunology, immunotherapy : CII (2024).

Epitope: WT1 126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WT1 126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WT1 126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WT1 126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WT1 126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WT1 126-134
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 126-134
Source molecule (GenBank): P19544.2
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Isabela Ferreira Soares; Barbara de Oliveira Baptista; Ada da Silva Matos; Rodrigo Nunes Rodrigues-da-Silva; Mario Antonio Kujbida Junior; Letusa Albrecht; Cinthia Magalhães Rodolphi; Kézia Katiani Gorza Scopel; Ana Luiza Carneiro Alencar; Rodrigo Medeiros de Souza; Hugo Amorim Dos Santos de Souza; Evelyn Kety Pratt Riccio; Jenifer Peixoto de Barros; Paulo Renato Rivas Totino; Cláudio Tadeu Daniel-Ribeiro; Lilian Rose Pratt-Riccio; Josué da Costa Lima-Junior. "Characterization of T and B cell epitopes in PvCyRPA by studying the naturally acquired immune response in Brazilian Amazon communities." Scientific reports (2024).

Epitope: B6-PvCyRPA(257−272)
Chemical type: Peptide from protein
Sequence: TLDVTNEGKKEYKFKC
Position: 257-272
Source molecule (GenBank): A5K678
Assay category: BCell
Result: Positive

Epitope: B6-PvCyRPA(257−272)
Chemical type: Peptide from protein
Sequence: TLDVTNEGKKEYKFKC
Position: 257-272
Source molecule (GenBank): A5K678
Assay category: BCell
Result: Negative
Reference: Jaime Castillo-Pérez; Francisco Javier Martínez-Lobo; Raquel Frómeta; José María Castro; Isabel Simarro; Cinta Prieto. "Linear epitopes of PRRSV-1 envelope proteins ectodomains are not correlated with broad neutralization." Porcine health management (2024).

Epitope: EU-21_GP4.1
Chemical type: Peptide from protein
Sequence: PTTQKGNFRKPS
Position: 55-66
Source molecule (GenBank): WRW24802.1
Assay category: BCell
Result: Negative

Epitope: EU-21_GP4.1
Chemical type: Peptide from protein
Sequence: PTTQKGNFRKPS
Position: 55-66
Source molecule (GenBank): WRW24802.1
Assay category: BCell
Result: Positive

Epitope: EU-24_GP2.2
Chemical type: Peptide from protein
Sequence: TMEHSGQAAWKQ
Position: 115-126
Source molecule (GenBank): WOJ71341.1
Assay category: BCell
Result: Negative

Epitope: EU-24_GP2.2
Chemical type: Peptide from protein
Sequence: TMEHSGQAAWKQ
Position: 115-126
Source molecule (GenBank): WOJ71341.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P24
Chemical type: Peptide from protein
Sequence: LSMSIPSGYDNL
Position: 90-101
Source molecule (GenBank): WRW24793.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P46
Chemical type: Peptide from protein
Sequence: LGLGAVSITGFF
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P49
Chemical type: Peptide from protein
Sequence: MGGLDNFCYDPT
Position: 1-12
Source molecule (GenBank): WRW24826.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P65
Chemical type: Peptide from protein
Sequence: VGNVSLQYNTTL
Position: 171-182
Source molecule (GenBank): XDB37633.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P81
Chemical type: Peptide from protein
Sequence: FLRRSPASPVSR
Position: 198-209
Source molecule (GenBank): AZA04953.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P94
Chemical type: Peptide from protein
Sequence: QCREAVGTPQYI
Position: 72-83
Source molecule (GenBank): AAA46277.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P109
Chemical type: Peptide from protein
Sequence: CRPDVPQFAIKH
Position: 79-90
Source molecule (GenBank): UZX50396.1
Assay category: BCell
Result: Positive

Epitope: PRRSV-1 P127
Chemical type: Peptide from protein
Sequence: DHDELSMVIPPG
Position: 86-97
Source molecule (GenBank): WRW24796.1
Assay category: BCell
Result: Positive
Reference: Yoshihiro Watanabe; Ikuo Okafuji; Satoko Tamai; Natsuko Hosokawa; Takako Ohbayashi; Shigeki Kato; Kiyoaki Ito; Mitsuhiro Kawano; Yusei Ohshima. "Epitope profiling of cow's milk allergen-specific antibodies with determining IgE content in epitopes-ALL, a 14-epitopes mixture." Journal of immunological methods (2024).

Epitope: alpha-casein VK19
Chemical type: Peptide from protein
Sequence: VPQLEIVPNSAEERLHSG
Assay category: BCell
Result: Positive

Epitope: alpha-casein VK19
Chemical type: Peptide from protein
Sequence: VPQLEIVPNSAEERLHSG
Assay category: BCell
Result: Positive

Epitope: beta-casein SP19
Chemical type: Peptide from protein
Sequence: SLVYPFPGPIPNSLPQNIP
Position: 72-90
Source molecule (GenBank): P02666.2
Assay category: BCell
Result: Negative

Epitope: beta-casein SP19
Chemical type: Peptide from protein
Sequence: SLVYPFPGPIPNSLPQNIP
Position: 72-90
Source molecule (GenBank): P02666.2
Assay category: BCell
Result: Positive
Reference: Siyu Zhang; Changxin Huang; Yongqiang Li; Zhaoyang Li; Ying Zhu; Lili Yang; Haokun Hu; Quan Sun; Mengmeng Liu; Songqiang Cao. "Anti-cancer immune effect of human colorectal cancer neoantigen peptide based on MHC class I molecular affinity screening." Frontiers in immunology (2024).

Epitope: 1_2 ASUN
Chemical type: Peptide, no natural source
Sequence: HYCTGAYWI
Assay category: TCell
Result: Positive
Host: M 60
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 2 ALPK1
Chemical type: Peptide, no natural source
Sequence: AFSAYMPLF
Assay category: TCell
Result: Positive
Host: F 47
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 4 NKX2-1
Chemical type: Peptide, no natural source
Sequence: APAPGTASL
Assay category: TCell
Result: Positive
Host: F 76
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 4 SOX2
Chemical type: Peptide, no natural source
Sequence: MHRYDVSPL
Assay category: TCell
Result: Positive
Host: F 76
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 5 DNAH3
Chemical type: Peptide, no natural source
Sequence: DLAEEMPAL
Assay category: TCell
Result: Positive
Host: F 64
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 6_2 RCVRN
Chemical type: Peptide, no natural source
Sequence: IYTKFFPDT
Assay category: TCell
Result: Positive
Host: F 86
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 6_2 PITPNM2
Chemical type: Peptide, no natural source
Sequence: VRAGAVDMV
Assay category: TCell
Result: Positive
Host: F 86
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Gavuthami Murugesan; Rachel L Paterson; Rakesh Kulkarni; Veronica Ilkow; Richard J Suckling; Mary M Connolly; Vijaykumar Karuppiah; Robert Pengelly; Archana Jadhav; Jose Donoso; Tiaan Heunis; Wilawan Bunjobpol; Gwilym Philips; Kafayat Ololade; Daniel Kay; Anshuk Sarkar; Claire Barber; Ritu Raj; Carole Perot; Tressan Grant; Agatha Treveil; Andrew Walker; Marcin Dembek; Dawn Gibbs-Howe; Miriam Hock; Ricardo J Carreira; Kate E Atkin; Lucy Dorrell; Andrew Knox; Sarah Leonard; Mariolina Salio; Luis F Godinho. "Viral sequence determines HLA-E-restricted T cell recognition of hepatitis B surface antigen." Nature communications (2024).

Epitope: HBV Env 236-244
Chemical type: Peptide from protein
Sequence: RWMCLRRFI
Position: 236-244
Source molecule (GenBank): V5JZH5.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 38.2
Reference: Mariyana Atanasova; Ivan Dimitrov; Nikola Ralchev; Aleksandar Markovski; Iliyan Manoylov; Silviya Bradyanova; Nikolina Mihaylova; Andrey Tchorbanov; Irini Doytchinova. "Design, Development and Immunogenicity Study of a Multi-Epitope Vaccine Prototype Against SARS-CoV-2." Pharmaceuticals (Basel, Switzerland) (2024).

Epitope: SARS-CoV2 E2-10
Chemical type: Peptide from protein
Sequence: YSFVSEETG
Position: 2-10
Source molecule (GenBank): P0DTC4.1
Assay category: BCell
Result: Negative
Reference: Samantha J McClenahan; Chad M Kormos; Melinda Gunnell; Michael D Hambuchen; Pamela Lamb; Frank Ivy Carroll; Anita H Lewin; Eric C Peterson; Samuel Michael Owens. "Design, synthesis and biological evaluation of a bi-specific vaccine against α-pyrrolidinovalerophenone (α-PVP) and 3,4-methylenedioxypyrovalerone (MDPV) in rats." Vaccine (2020).

Epitope: MDPV (3,4-methylenedioxypyrovalerone)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 6.6
Host: M 9 weeks

Epitope: MDPV (3,4-methylenedioxypyrovalerone)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Intermediate
Quantitative measurement: 100.0
Host: M 9 weeks

Epitope: MDPV (3,4-methylenedioxypyrovalerone)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 9 weeks

Epitope: MDPV (3,4-methylenedioxypyrovalerone)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 9 weeks
Reference: W D Bechtel; K H Weber. "Brotizolam radioimmunoassay: development, evaluation, and application to human plasma samples." Journal of pharmaceutical sciences (1985).

Epitope: We 964 (structure 12)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low
Host:  15 weeks
Reference: A L De Blas; L Sangameswaran; S A Haney; D Park; C J Abraham; C A Rayner. "Monoclonal antibodies to benzodiazepines." Journal of neurochemistry (1985).

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-High

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-High

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-High

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 4.1

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 4.2

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-High

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-High

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-Low

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 0.5

Epitope: Ro 5-3453 (Nimetazepam)
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 2.3
Reference: Wen C Shan; Ya L Cui; Xin He; Lei Zhang; Jing Liu; Jian P Wang. "Production of monoclonal antibody against clonazepam for immunoassay of benzodiazepine drugs in swine tissues." Journal of environmental science and health. Part. B, Pesticides, food contaminants, and agricultural wastes (2015).

Epitope: nitrazepam
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: F 8 weeks
Reference: Zifu Zhong; Marie H Deventer; Yong Chen; Stijn Vanhee; Inés Lammens; Kim Deswarte; Yi Huang; Tingting Ye; Haixiu Wang; Lutz Nuhn; Marthe M Vandeputte; Mark Gontsarik; Xiaole Cui; Niek N Sanders; Stefan Lienenklaus; Bart N Lambrecht; Antonio P Baptista; Christophe P Stove; Bruno G De Geest. "A Fentanyl Hapten-Displaying Lipid Nanoparticle Vaccine that Non-Covalently Encapsulates a TLR7/8 Agonist and T-Helper Epitope Induces Protective Anti-Fentanyl Immunity." Angewandte Chemie (International ed. in English) (2025).

Epitope: acetylfentanyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host:  7-9 weeks

Epitope: acetylfentanyl
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host:  7-9 weeks
Reference: Hongnuan Wang; Wei Li; Ziyue Ma; Nianzhi Zhang; Yongqiang Wang; Li Gao; Xiaoqi Li; Hong Cao; Shijun J Zheng. "Identification of novel T-cell epitopes on viral protein VP4 of Infectious Bursal Disease Virus (IBDV) that play critical roles in eliciting cellular immune response." International journal of biological macromolecules (2025).

Epitope: IBDV VP4 82-99_4/10
Chemical type: Peptide from protein
Sequence: GILASPGVLRGAHNLDCV
Position: 534-551
Source molecule (GenBank): P61825
Assay category: TCell
Result: Negative
Host:  9 days
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: IBDV VP4 82-99_4/10
Chemical type: Peptide from protein
Sequence: GILASPGVLRGAHNLDCV
Position: 534-551
Source molecule (GenBank): P61825
Assay category: TCell
Result: Positive
Host:  9 days
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: IBDV VP4 82-99_4/10
Chemical type: Peptide from protein
Sequence: GILASPGVLRGAHNLDCV
Position: 534-551
Source molecule (GenBank): P61825
Assay category: TCell
Result: Positive-Low
Host:  9 days
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: IBDV VP4 82-99_4/10
Chemical type: Peptide from protein
Sequence: GILASPGVLRGAHNLDCV
Position: 534-551
Source molecule (GenBank): P61825
Assay category: TCell
Result: Negative
Host:  9 days
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: IBDV VP4 82-99_4/10
Chemical type: Peptide from protein
Sequence: GILASPGVLRGAHNLDCV
Position: 534-551
Source molecule (GenBank): P61825
Assay category: TCell
Result: Positive-Intermediate
Host:  9 days
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: IBDV VP4 199-216_4/23
Chemical type: Peptide from protein
Sequence: NSGNLAIAYMDVFRPKVP
Position: 651-668
Source molecule (GenBank): P61825
Assay category: TCell
Result: Negative
Host:  9 days
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Evan R Abt; Alex K Lam; Miyako Noguchi; Khalid Rashid; Jami McLaughlin; Pu-Lin Teng; Wendy Tran; Donghui Cheng; Pavlo A Nesterenko; Zhiyuan Mao; Amanda L Creech; Giselle Burton Sojo; Arjit Vijey Jeyachandran; Ying K Tam; Jill E Henley; Lucio Comai; Norbert Pardi; Vaithilingaraja Arumugaswami; Owen N Witte; Caius G Radu; Ting-Ting Wu. "Staggered immunization with mRNA vaccines encoding SARS-CoV-2 polymerase or spike antigens broadens the T cell epitope repertoire." Proceedings of the National Academy of Sciences of the United States of America (2024).

Epitope: TGYHFREL
Chemical type: Peptide from protein
Sequence: TGYHFREL
Position: 4736-4743
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Engineered

Epitope: TGYHFREL
Chemical type: Peptide from protein
Sequence: TGYHFREL
Position: 4736-4743
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Engineered

Epitope: TGYHFREL
Chemical type: Peptide from protein
Sequence: TGYHFREL
Position: 4736-4743
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Engineered
Reference: Stephen F Marino; Oliver Daumke. "Structure-based humanization of a therapeutic antibody for multiple myeloma." Journal of molecular medicine (Berlin, Germany) (2024).

Epitope: Epitope of J22.9xi on BCMA
Chemical type: Discontinuous protein residues
Discontinuous residues: Y13, D15, S16, L17, L18, H19, A20, I22, P23, L26, R27, T32
Source molecule (GenBank): Q02223.2
Assay category: BCell
Result: Positive
Quantitative measurement: 2.7

Epitope: Epitope of J22.9xi on BCMA
Chemical type: Discontinuous protein residues
Discontinuous residues: Y13, D15, S16, L17, L18, H19, A20, I22, P23, L26, R27, T32
Source molecule (GenBank): Q02223.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.28

Epitope: Epitope of Fab J22.9-H on BCMA
Chemical type: Discontinuous protein residues
Discontinuous residues: Y13, D15, L17, L18, H19, A20, C21, I22, P23, L26, R27, T32
Source molecule (GenBank): Q02223.2
Assay category: BCell
Result: Positive
Quantitative measurement: 15.0

Epitope: Epitope of Fab J22.9-H on BCMA
Chemical type: Discontinuous protein residues
Discontinuous residues: Y13, D15, L17, L18, H19, A20, C21, I22, P23, L26, R27, T32
Source molecule (GenBank): Q02223.2
Assay category: BCell
Result: Positive
Quantitative measurement: 200.0

Epitope: Epitope of Fab J22.9-H on BCMA
Chemical type: Discontinuous protein residues
Discontinuous residues: Y13, D15, L17, L18, H19, A20, C21, I22, P23, L26, R27, T32
Source molecule (GenBank): Q02223.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.1