Reference: Joshua R Veatch; Brenda L Jesernig; Julia Kargl; Matthew Fitzgibbon; Sylvia M Lee; Christina Baik; Renato Martins; A McGarry Houghton; Stanley R Riddell. "Endogenous CD4<sup>+</sup> T Cells Recognize Neoantigens in Lung Cancer Patients, Including Recurrent Oncogenic  and  () Driver Mutations." Cancer immunology research (2019).

Epitope: VCAN P1
Chemical type: Peptide, no natural source
Sequence: IGESTSHVPPTTLKDIVAKE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: AIFM2 P1
Chemical type: Peptide, no natural source
Sequence: QGLVVGIDLKNQMMLLQGGE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CP P2
Chemical type: Peptide, no natural source
Sequence: EDSACITWAYYSTVDQVKDL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: COL8A1 P2
Chemical type: Peptide, no natural source
Sequence: EKGPIGTPGIGGPPGEPGLP
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GOLGB1 P2
Chemical type: Peptide, no natural source
Sequence: LQDDRDMVIDEAKKWERKFS
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: FAM91A1 P1
Chemical type: Peptide, no natural source
Sequence: LPEKCAVDKIIDSVPQLSGS
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: FAT1 P1
Chemical type: Peptide, no natural source
Sequence: DPCLSKKPLEEKPPQPYSAR
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ARFGEF2 P1
Chemical type: Peptide, no natural source
Sequence: HASMYYPYLCEIMHFDLIPE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WAPAL P1
Chemical type: Peptide, no natural source
Sequence: SNYKIKYFGFDDLGESEDDE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GCC2 P1
Chemical type: Peptide, no natural source
Sequence: LQEEITSLQSSVQKYEEKNT
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ST6GAL2 P1
Chemical type: Peptide, no natural source
Sequence: LKQWRQRMLFGIFSWGLLFL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: RC3H1 P1
Chemical type: Peptide, no natural source
Sequence: IALQRTGDPANLNLLRPHLE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DAGLB P1
Chemical type: Peptide, no natural source
Sequence: SSQLLNGLKTAATNVWETRI
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PRDM5 P1
Chemical type: Peptide, no natural source
Sequence: LYILDATNPRHSNCLRFVHE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TMEM131 P2
Chemical type: Peptide, no natural source
Sequence: APGIYSLTEMLDFGTLRTQD
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GTF3C1 P2
Chemical type: Peptide, no natural source
Sequence: SDSEEEKSSSKRRGRGSQKD
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TNFAIP3 P2
Chemical type: Peptide, no natural source
Sequence: GNAKCNCYCNECFQFKQMYG
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WAPAL P2
Chemical type: Peptide, no natural source
Sequence: FGFDDLGESEDDEDDDCQVE
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: INO80 P2
Chemical type: Peptide, no natural source
Sequence: LSLKASCRLHQLRSWGAPEG
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: RC3H1 P2
Chemical type: Peptide, no natural source
Sequence: DPANLNLLRPHLELLANIDP
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: BRCA1 P2
Chemical type: Peptide, no natural source
Sequence: AEDPKDFMLSGERVLQTERS
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CRYGS P2
Chemical type: Peptide, no natural source
Sequence: LSRCNSMKVEGGTWAVYERP
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NOTCH2 P1
Chemical type: Peptide, no natural source
Sequence: PGYQGVNCEYEVDDCQNQPC
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: PWP2 P1
Chemical type: Peptide, no natural source
Sequence: VVGSKDMSTWVFGTERWDNL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: SLC27A2 P1
Chemical type: Peptide, no natural source
Sequence: VRLALGNGLRGDVLRQFVKR
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TTC34 P2
Chemical type: Peptide, no natural source
Sequence: AAAQEAVTLLDAGQPRQALG
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: CTB-133G6.1 P2
Chemical type: Peptide, no natural source
Sequence: EKGKSPEHLKDKGQDARERR
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TMEM176B P2
Chemical type: Peptide, no natural source
Sequence: LGVVSCFLGVCLSLGPWTVL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ADCY6 P1
Chemical type: Peptide, no natural source
Sequence: ECVAVMFASIANFFEFYVEL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TP53 P2
Chemical type: Peptide, no natural source
Sequence: ACPGRDWRTEEENLRKKGEP
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ARFGEF1 P2
Chemical type: Peptide, no natural source
Sequence: WMTTTCKHALYAICDVFTQY
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TENC1 P1
Chemical type: Peptide, no natural source
Sequence: RLSPGEALPPVSQGGTGKAP
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: BMI1 P1
Chemical type: Peptide, no natural source
Sequence: KEEVNDKRYLRCPSAMTVMH
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: FAM8A1 P1
Chemical type: Peptide, no natural source
Sequence: RATPVTRVGSAAPLRSPSET
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TOR1B P1
Chemical type: Peptide, no natural source
Sequence: KLDLEEKLFGQHLSTEVIFK
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ARHGAP21 P1
Chemical type: Peptide, no natural source
Sequence: DKLKACEVSKNKDRKEQSET
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GAS6
Chemical type: Peptide from protein
Sequence: HGMWQTISVEELARNLVIKVNRDAVMK
Position: 376-402
Source molecule (GenBank): 4557617
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GAS6 neo
Chemical type: Peptide, no natural source
Sequence: HGMWQTISVEELAQNLVIKVNRDAVMK
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MGEA5
Chemical type: Peptide from protein
Sequence: GTPLVAAPSLNATTVVTTVYQEPIMSQ
Position: 361-387
Source molecule (GenBank): 215490056
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STK11
Chemical type: Peptide from protein
Sequence: DTFSGFKVDIWSAGVTLYNITTGLYPF
Position: 229-255
Source molecule (GenBank): 4507271
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: STK11 neo
Chemical type: Peptide, no natural source
Sequence: DTFSGFKVDIWSAVVTLYNITTGLYPF
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: THEM6 neo
Chemical type: Peptide, no natural source
Sequence: LAEQRFPGRVLPSYLDLLLHMNNARYL
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: DNASE2
Chemical type: Peptide from protein
Sequence: WCVSPKGPWTCVGDMNRNQGEEQRGGG
Position: 282-308
Source molecule (GenBank): 224809789
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo