LiteFold/IEDB huggingface dataset:
Reference: Tim D Jones; Arron R Hearn; Robert G E Holgate; Dorota Kozub; Mark H Fogg; Francis J Carr; Matthew P Baker; Javier Lacadena; Kurt R Gehlsen. "A deimmunised form of the ribotoxin, α-sarcin, lacking CD4+ T cell epitopes and its use as an immunotoxin warhead." Protein engineering, design & selection : PEDS (2016).

Epitope: α-sarcin 22-36
Chemical type: Peptide from protein
Sequence: RLLYNQNKAESNSHH
Position: 49-63
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 49-63
Chemical type: Peptide from protein
Sequence: PHWFTNGYDGDGKLP
Position: 76-90
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 61-75
Chemical type: Peptide from protein
Sequence: KLPKGRTPIKFGKSD
Position: 88-102
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 82-96
Chemical type: Peptide from protein
Sequence: HSKDGNGKTDHYLLE
Position: 109-123
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 85-99
Chemical type: Peptide from protein
Sequence: DGNGKTDHYLLEFPT
Position: 112-126
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 94-108
Chemical type: Peptide from protein
Sequence: LLEFPTFPDGHDYKF
Position: 121-135
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 106-120
Chemical type: Peptide from protein
Sequence: YKFDSKKPKENPGPA
Position: 133-147
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 112-126
Chemical type: Peptide from protein
Sequence: KPKENPGPARVIYTY
Position: 139-153
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: α-sarcin 130-144
Chemical type: Peptide from protein
Sequence: VFCGIIAHTKENQGE
Position: 157-171
Source molecule (GenBank): BAA02863
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Catherine J Mitran; Angie Mena; Sedami Gnidehou; Shanna Banman; Eliana Arango; Barbara A S Lima; Hazel Lugo; Aravindhan Ganesan; Ali Salanti; Anthony K Mbonye; Francis Ntumngia; Khaled Barakat; John H Adams; Flora S Kano; Luzia H Carvalho; Amanda E Maestre; Michael F Good; Stephanie K Yanow. "Antibodies to Cryptic Epitopes in Distant Homologues Underpin a Mechanism of Heterologous Immunity between  PvDBP and  VAR2CSA." mBio (2019).

Epitope: P20
Chemical type: Peptide from protein
Sequence: TNVCIQKQEHKEYVKSKCSN
Position: 2220-2239
Source molecule (GenBank): ABS79816.1
Assay category: BCell
Result: Positive

Epitope: P20
Chemical type: Peptide from protein
Sequence: TNVCIQKQEHKEYVKSKCSN
Position: 2220-2239
Source molecule (GenBank): ABS79816.1
Assay category: BCell
Result: Positive

Epitope: P20
Chemical type: Peptide from protein
Sequence: TNVCIQKQEHKEYVKSKCSN
Position: 2220-2239
Source molecule (GenBank): ABS79816.1
Assay category: BCell
Result: Positive

Epitope: P20
Chemical type: Peptide from protein
Sequence: TNVCIQKQEHKEYVKSKCSN
Position: 2220-2239
Source molecule (GenBank): ABS79816.1
Assay category: BCell
Result: Positive
Reference: Ze-Lang Cai; Zhen Zhang; Wen-Li Luo; Yi-Bo Hou; Yong-Shen He; Jia-Jie Chen; Kunmei Ji. "Identification of immunodominant IgE epitopes of the major house dust mite allergen Der f 24." International journal of molecular medicine (2019).

Epitope: Der f 24 67-98
Chemical type: Peptide from protein
Sequence: SQLEITKQFLPKEQWPSYEEDMDKGRFLTPYL
Position: 67-98
Source molecule (GenBank): AJK91617.1
Assay category: BCell
Result: Positive-Low
Host:  18-55 years

Epitope: Der f 24 67-98
Chemical type: Peptide from protein
Sequence: SQLEITKQFLPKEQWPSYEEDMDKGRFLTPYL
Position: 67-98
Source molecule (GenBank): AJK91617.1
Assay category: BCell
Result: Negative
Host:  18-55 years
Reference: Ada da Silva Matos; Rodrigo Nunes Rodrigues-da-Silva; Isabela Ferreira Soares; Barbara de Oliveira Baptista; Rodrigo Medeiros de Souza; Lana Bitencourt-Chaves; Paulo Renato Rivas Totino; Juan Camilo Sánchez-Arcila; Cláudio Tadeu Daniel-Ribeiro; César López-Camacho; Arturo Reyes-Sandoval; Lilian Rose Pratt-Riccio; Josué da Costa Lima-Junior. "Antibody Responses Against  TRAP Recombinant and Synthetic Antigens in Naturally Exposed Individuals From the Brazilian Amazon." Frontiers in immunology (2019).

Epitope: PvTRAP 439-454
Chemical type: Peptide from protein
Sequence: EQPEDKAKKSSNNGYK
Position: 439-454
Source molecule (GenBank): AAC47463.1
Assay category: BCell
Result: Positive
Host:  12-88 years
Reference: Yuxia Li; Xinfeng Wang; Da Teng; Hui Chen; Maoshui Wang; Junling Wang; Jianmin Zhang; Wei He. "Identification of the Ligands of TCRγδ by Screening the Immune Repertoire of γδT Cells From Patients With Tuberculosis." Frontiers in immunology (2019).

Epitope: EP6
Chemical type: Peptide, no natural source
Sequence: GNNPLHVHHDKR
Assay category: TCell
Result: Positive
Cell type: T cell γδ
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EP7
Chemical type: Peptide, no natural source
Sequence: QVNGLGERSQQM
Assay category: TCell
Result: Positive
Cell type: T cell γδ
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Sumin Jeon; Jennifer Lee; Sung-Hwan Park; Hyun-Duck Kim; Youngnim Choi. "Associations of Anti-Aquaporin 5 Autoantibodies with Serologic and Histopathological Features of Sjögren's Syndrome." Journal of clinical medicine (2019).

Epitope: AQP5 peptide A
Chemical type: Peptide from protein
Sequence: WPSALPT
Position: 35-41
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive
Host: F 36.8-64 years

Epitope: AQP5 peptide A
Chemical type: Peptide from protein
Sequence: WPSALPT
Position: 35-41
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive
Host: F 38.2-68 years

Epitope: AQP5 peptide A
Chemical type: Peptide from protein
Sequence: WPSALPT
Position: 35-41
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive-High
Host: F 36.8-64 years

Epitope: AQP5 peptide A
Chemical type: Peptide from protein
Sequence: WPSALPT
Position: 35-41
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive-Low
Host: F 38.2-68 years

Epitope: AQP5 peptide A
Chemical type: Peptide from protein
Sequence: WPSALPT
Position: 35-41
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive-Low
Host: F 21.1-39.9 years

Epitope: AQP5 peptide A
Chemical type: Peptide from protein
Sequence: WPSALPT
Position: 35-41
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Negative
Host: F 44.6-69.4 years

Epitope: AQP5 peptide C2
Chemical type: Peptide from protein
Sequence: NNNTTQG
Position: 123-129
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Negative
Host: F 44.6-69.4 years

Epitope: AQP5 peptide C2
Chemical type: Peptide from protein
Sequence: NNNTTQG
Position: 123-129
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive
Host: F 36.8-64 years

Epitope: AQP5 peptide C2
Chemical type: Peptide from protein
Sequence: NNNTTQG
Position: 123-129
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive
Host: F 38.2-68 years

Epitope: AQP5 peptide C2
Chemical type: Peptide from protein
Sequence: NNNTTQG
Position: 123-129
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive-High
Host: F 36.8-64 years

Epitope: AQP5 peptide C2
Chemical type: Peptide from protein
Sequence: NNNTTQG
Position: 123-129
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive-Low
Host: F 38.2-68 years

Epitope: AQP5 peptide C2
Chemical type: Peptide from protein
Sequence: NNNTTQG
Position: 123-129
Source molecule (GenBank): P55064.1
Assay category: BCell
Result: Positive-Low
Host: F 21.1-39.9 years
Reference: Hao Lu; Hongxia Shao; Hongjun Chen; Jianjun Zhang; Weikang Wang; Tuofan Li; Quan Xie; Aijian Qin; Jianqiang Ye. "Identification of novel B cell epitopes in the fiber protein of serotype 8 Fowl adenovirus." AMB Express (2019).

Epitope: mAb 4D9 epitope
Chemical type: Peptide from protein
Sequence: ETLLIEDDVSGQGKELGVNLNPAGPITADEQGL
Position: 184-216
Source molecule (GenBank): AWT08538.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 4D9 epitope
Chemical type: Peptide from protein
Sequence: ETLLIEDDVSGQGKELGVNLNPAGPITADEQGL
Position: 184-216
Source molecule (GenBank): AWT08538.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 4D9 epitope
Chemical type: Peptide from protein
Sequence: ETLLIEDDVSGQGKELGVNLNPAGPITADEQGL
Position: 184-216
Source molecule (GenBank): AWT08538.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 4D9 epitope
Chemical type: Peptide from protein
Sequence: ETLLIEDDVSGQGKELGVNLNPAGPITADEQGL
Position: 184-216
Source molecule (GenBank): AWT08538.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: mAb 4D9 epitope
Chemical type: Peptide from protein
Sequence: ETLLIEDDVSGQGKELGVNLNPAGPITADEQGL
Position: 184-216
Source molecule (GenBank): AWT08538.1
Assay category: BCell
Result: Positive
Host:  6 weeks
Reference: Qingqing Xie; Zhao Wang; Fengyun Ni; Xiaorui Chen; Jianpeng Ma; Nita Patel; Hanxin Lu; Ye Liu; Jing-Hui Tian; David Flyer; Michael J Massare; Larry Ellingsworth; Gregory Glenn; Gale Smith; Qinghua Wang. "Structure basis of neutralization by a novel site II/IV antibody against respiratory syncytial virus fusion protein." PloS one (2019).

Epitope: RSV Fusion protein antigenic site II peptide
Chemical type: Peptide from protein
Sequence: NSELLSLINDMPITNDQKKLMSNNV
Position: 254-278
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive
Quantitative measurement: 442.0
Host: F

Epitope: RSV Fusion protein antigenic site II peptide
Chemical type: Peptide from protein
Sequence: NSELLSLINDMPITNDQKKLMSNNV
Position: 254-278
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive
Host: F

Epitope: RSV Fusion protein antigenic site II peptide
Chemical type: Peptide from protein
Sequence: NSELLSLINDMPITNDQKKLMSNNV
Position: 254-278
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.21
Host: F
Reference: Matthias Haffke; Dominique Fehlmann; Gabriele Rummel; Jacques Boivineau; Myriam Duckely; Nina Gommermann; Simona Cotesta; Finton Sirockin; Felix Freuler; Amanda Littlewood-Evans; Klemens Kaupmann; Veli-Pekka Jaakola. "Structural basis of species-selective antagonist binding to the succinate receptor." Nature (2019).

Epitope: Epitope of Nanobody6 on rat succinate receptor 1
Chemical type: Discontinuous protein residues
Discontinuous residues: M48, N50, N52, R116, L119, F122, P123, F124, R125, E126, V293, G294, D295, H296, D299, M300
Source molecule (GenBank): Q6IYF9.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.12

Epitope: Epitope of Nanobody6 on rat succinate receptor 1
Chemical type: Discontinuous protein residues
Discontinuous residues: M48, N50, N52, R116, L119, F122, P123, F124, R125, E126, V293, G294, D295, H296, D299, M300
Source molecule (GenBank): Q6IYF9.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.94

Epitope: Epitope of Nanobody6 on rat succinate receptor 1
Chemical type: Discontinuous protein residues
Discontinuous residues: M48, N50, N52, R116, L119, F122, P123, F124, R125, E126, V293, G294, D295, H296, D299, M300
Source molecule (GenBank): Q6IYF9.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Nanobody6 on rat succinate receptor 1
Chemical type: Discontinuous protein residues
Discontinuous residues: M48, N50, N52, R116, L119, F122, P123, F124, R125, E126, V293, G294, D295, H296, D299, M300
Source molecule (GenBank): Q6IYF9.1
Assay category: BCell
Result: Positive

Epitope: Epitope of Nanobody6 on rat succinate receptor 1
Chemical type: Discontinuous protein residues
Discontinuous residues: M48, N50, N52, R116, L119, F122, P123, F124, R125, E126, V293, G294, D295, H296, D299, M300
Source molecule (GenBank): Q6IYF9.1
Assay category: BCell
Result: Positive
Reference: Li Ma; Wenrong Zhao; Xunya Hou; Mengmeng Liu; Yanna Li; Li Shen; Xindong Xu. "Identification of linear epitopes in SjSP-13 of Schistosoma japonicum using a GST-peptide fusion protein microplate array." Parasites & vectors (2019).

Epitope: SjSP-13 p4
Chemical type: Peptide from protein
Sequence: QRFLEFEPFIPIMSEIIS
Position: 48-65
Source molecule (GenBank): CAX83041.1
Assay category: BCell
Result: Negative

Epitope: SjSP-13 p10
Chemical type: Peptide from protein
Sequence: DECSKLGMCHKNHSMSNF
Position: 102-119
Source molecule (GenBank): CAX83041.1
Assay category: BCell
Result: Negative
Reference: Anna M Ehlers; Marco Klinge; Waltraud Suer; Yvonne Weimann; André C Knulst; Frithjof Besa; Thuy-My Le; Henny G Otten. "Ara h 7 isoforms share many linear epitopes: Are 3D epitopes crucial to elucidate divergent abilities?" Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology (2019).

Epitope: epitope H
Chemical type: Peptide from protein
Sequence: LNRFQNNQRCMC
Position: 102-113
Source molecule (GenBank): ABW17159.1
Assay category: BCell
Result: Positive-Low
Host:  20-66 years

Epitope: epitope H
Chemical type: Peptide from protein
Sequence: LNRFQNNQRCMC
Position: 102-113
Source molecule (GenBank): ABW17159.1
Assay category: BCell
Result: Positive
Host:  18-54 years

Epitope: epitope H
Chemical type: Peptide from protein
Sequence: LNRFQNNQRCMC
Position: 102-113
Source molecule (GenBank): ABW17159.1
Assay category: BCell
Result: Positive
Host:  18-54 years

Epitope: epitope H
Chemical type: Peptide from protein
Sequence: LNRFQNNQRCMC
Position: 102-113
Source molecule (GenBank): ABW17159.1
Assay category: BCell
Result: Negative
Host:  20-66 years
Reference: Jonghwan Jegal; No-June Park; Tae-Young Kim; Sangho Choi; Sang Woo Lee; Jin Hang; Su-Nam Kim; Min Hye Yang. "Effect of Topically Applied  Diels on the Development of Atopic Dermatitis-Like Skin Symptoms in Mice." Nutrients (2019).

Epitope: oxazolone
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host: F 6 weeks
Reference: Jooeun Bae; Neha Parayath; Wenxue Ma; Mansoor Amiji; Nikhil Munshi; Kenneth C Anderson. "BCMA peptide-engineered nanoparticles enhance induction and function of antigen-specific CD8<sup>+</sup> cytotoxic T lymphocytes against multiple myeloma: clinical applications." Leukemia (2020).

Epitope: OH (RhaLac)
Chemical type: Glycolipid
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 4997000.0
Host:  6-8 weeks
Reference: Xuelu Huan; Ziyi Zhuo; Ziwei Xiao; Ee Chee Ren. "Crystal structure of suboptimal viral fragments of Epstein Barr Virus Rta peptide-HLA complex that stimulate CD8 T cell response." Scientific reports (2019).

Epitope: EBV Rta 134-142
Chemical type: Peptide from protein
Sequence: ATIGTAMYK
Position: 134-142
Source molecule (GenBank): ABB89247.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: EBV Rta 134-142
Chemical type: Peptide from protein
Sequence: ATIGTAMYK
Position: 134-142
Source molecule (GenBank): ABB89247.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: EBV Rta 134-142
Chemical type: Peptide from protein
Sequence: ATIGTAMYK
Position: 134-142
Source molecule (GenBank): ABB89247.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: EBV Rta 134-142
Chemical type: Peptide from protein
Sequence: ATIGTAMYK
Position: 134-142
Source molecule (GenBank): ABB89247.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.35

Epitope: EBV Rta 134-142
Chemical type: Peptide from protein
Sequence: ATIGTAMYK
Position: 134-142
Source molecule (GenBank): ABB89247.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 70.0
Reference: Hideshi Yokoyama; Ryuta Mizutani; Shuji Noguchi; Naoki Hayashida. "Structures of the antibody 64M-5 Fab and its complex with dT(6-4)T indicate induced-fit and high-affinity mechanisms." Acta crystallographica. Section F, Structural biology communications (2019).

Epitope: dT(6-4)T
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 2.0
Host: F 6 weeks
Reference: Michelle S Miller; Jacqueline Douglass; Michael S Hwang; Andrew D Skora; Michael Murphy; Nickolas Papadopoulos; Kenneth W Kinzler; Bert Vogelstein; Shibin Zhou; Sandra B Gabelli. "An engineered antibody fragment targeting mutant β-catenin via major histocompatibility complex I neoantigen presentation." The Journal of biological chemistry (2019).

Epitope: ß-catenin 41-49 S45F mutant
Chemical type: Peptide, no natural source
Sequence: TTAPFLSGK
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 2.45

Epitope: ß-catenin 41-49 S45F mutant
Chemical type: Peptide, no natural source
Sequence: TTAPFLSGK
Assay category: MhcBinding
Result: Positive

Epitope: Blast 2
Chemical type: Peptide from protein
Sequence: SLNPKFLSGK
Position: 39-48
Source molecule (GenBank): P98172.1
Assay category: MhcBinding
Result: Positive
Reference: Cecilia Nakid-Cordero; Nadia Arzouk; Nicolas Gauthier; Nadine Tarantino; Martin Larsen; Sylvain Choquet; Sonia Burrel; Brigitte Autran; Vincent Vieillard; Amélie Guihot. "Skewed T cell responses to Epstein-Barr virus in long-term asymptomatic kidney transplant recipients." PloS one (2019).

Epitope: EBNA-3A-663-677
Chemical type: Peptide from protein
Sequence: QPQYFDLPLIQPISQ
Position: 654-668
Source molecule (GenBank): CEQ35165.1
Assay category: TCell
Result: Negative
Host:  35-73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBNA-3A-768-782
Chemical type: Peptide from protein
Sequence: PAAHFLHQPPMEGPW
Position: 768-782
Source molecule (GenBank): AFY97915.1
Assay category: TCell
Result: Negative
Host:  35-73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBNA-3A-798-812
Chemical type: Peptide from protein
Sequence: TDVVQHQLDALGYTL
Position: 798-812
Source molecule (GenBank): YP_401669.1
Assay category: TCell
Result: Negative
Host:  35-73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBNA-3A-893-907
Chemical type: Peptide from protein
Sequence: GRPRPRTPEWPVQGE
Position: 893-907
Source molecule (GenBank): AFY97915.1
Assay category: TCell
Result: Negative
Host:  35-73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBNA-3A-913-927
Chemical type: Peptide from protein
Sequence: TGPETRRVVVSAVVH
Position: 913-927
Source molecule (GenBank): ANI26358.1
Assay category: TCell
Result: Negative
Host:  35-73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EBNA-3A-923-937
Chemical type: Peptide from protein
Sequence: SAVVHMCQDDEFPDL
Position: 923-937
Source molecule (GenBank): ANI26358.1
Assay category: TCell
Result: Negative
Host:  35-73 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Anthony H Nguyen; Alex R B Thomsen; Thomas J Cahill; Rick Huang; Li-Yin Huang; Tara Marcink; Oliver B Clarke; Søren Heissel; Ali Masoudi; Danya Ben-Hail; Fadi Samaan; Venkata P Dandey; Yong Zi Tan; Chuan Hong; Jacob P Mahoney; Sarah Triest; John Little; Xin Chen; Roger Sunahara; Jan Steyaert; Henrik Molina; Zhiheng Yu; Amedee des Georges; Robert J Lefkowitz. "Structure of an endosomal signaling GPCR-G protein-β-arrestin megacomplex." Nature structural & molecular biology (2019).

Epitope: Epitope of nanobody 32 on beta-arrestin-1
Chemical type: Discontinuous protein residues
Discontinuous residues: K10, A12, S13, P14, G16, T19, D44, E46, Y47, K107
Source molecule (GenBank): P17870.1
Assay category: BCell
Result: Positive
Reference: Peter Reinink; Adam Shahine; Stephanie Gras; Tan-Yun Cheng; Rachel Farquhar; Kattya Lopez; Sara A Suliman; Josephine F Reijneveld; Jérôme Le Nours; Li Lynn Tan; Segundo R León; Judith Jimenez; Roger Calderon; Leonid Lecca; Megan B Murray; Jamie Rossjohn; D Branch Moody; Ildiko Van Rhijn. "A TCR β-Chain Motif Biases toward Recognition of Human CD1 Proteins." Journal of immunology (Baltimore, Md. : 1950) (2019).

Epitope: B. burgdorferi glycolipid-II (BbGL-II)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Xueyong Zhu; Hannah L Turner; Shanshan Lang; Ryan McBride; Sandhya Bangaru; Iuliia M Gilchuk; Wenli Yu; James C Paulson; James E Crowe; Andrew B Ward; Ian A Wilson. "Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies." Cell host & microbe (2019).

Epitope: NA-63 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: Q293, P325, N326, D327, P328, N329, I330, K332, Y337, P338, R383
Source molecule (GenBank): ASV61478.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.8

Epitope: NA-63 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: Q293, P325, N326, D327, P328, N329, I330, K332, Y337, P338, R383
Source molecule (GenBank): ASV61478.1
Assay category: BCell
Result: Positive

Epitope: NA-63 Fab epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: Q293, P325, N326, D327, P328, N329, I330, K332, Y337, P338, R383
Source molecule (GenBank): ASV61478.1
Assay category: BCell
Result: Positive
Reference: Jon M Steichen; Ying-Cing Lin; Colin Havenar-Daughton; Simone Pecetta; Gabriel Ozorowski; Jordan R Willis; Laura Toy; Devin Sok; Alessia Liguori; Sven Kratochvil; Jonathan L Torres; Oleksandr Kalyuzhniy; Eleonora Melzi; Daniel W Kulp; Sebastian Raemisch; Xiaozhen Hu; Steffen M Bernard; Erik Georgeson; Nicole Phelps; Yumiko Adachi; Michael Kubitz; Elise Landais; Jeffrey Umotoy; Amanda Robinson; Bryan Briney; Ian A Wilson; Dennis R Burton; Andrew B Ward; Shane Crotty; Facundo D Batista; William R Schief. "A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses." Science (New York, N.Y.) (2019).

Epitope: Epitope of germline BG18 iGL0 on N332-GT2 HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: P106, K107, R109, S110, M111, D294, V295, R296, M297, I383
Source molecule (GenBank): 6DFH_A
Assay category: BCell
Result: Positive
Quantitative measurement: 10.0

Epitope: Epitope of germline BG18 iGL0 on N332-GT2 HIV-1 Env
Chemical type: Discontinuous protein residues
Discontinuous residues: P106, K107, R109, S110, M111, D294, V295, R296, M297, I383
Source molecule (GenBank): 6DFH_A
Assay category: BCell
Result: Positive
Reference: Kinga Csorba; Lucia A Schirmbeck; Eylul Tuncer; Camillo Ribi; Pascale Roux-Lombard; Carlo Chizzolini; Uyen Huynh-Do; Dominique Vanhecke; Marten Trendelenburg. "Anti-C1q Antibodies as Occurring in Systemic Lupus Erythematosus Could Be Induced by an Epstein-Barr Virus-Derived Antigenic Site." Frontiers in immunology (2019).

Epitope: Collagen type XI-alpha-2 532-544
Chemical type: Peptide from protein
Sequence: GKAGRRGRAGADG
Position: 532-544
Source molecule (GenBank): P13942.5
Assay category: BCell
Result: Negative
Host:  19-81 years

Epitope: Collagen type XI-alpha-2 532-544
Chemical type: Peptide from protein
Sequence: GKAGRRGRAGADG
Position: 532-544
Source molecule (GenBank): P13942.5
Assay category: BCell
Result: Positive
Host:  16-84 years