LiteFold/IEDB huggingface dataset:
Reference: Hongquan Wan; Jin Gao; Kemin Xu; Hongjun Chen; Laura K Couzens; Katie H Rivers; Judy D Easterbrook; Kevin Yang; Lei Zhong; Mohsen Rajabi; Jianqiang Ye; Ishrat Sultana; Xiu-Feng Wan; Xiufan Liu; Daniel R Perez; Jeffery K Taubenberger; Maryna C Eichelberger. "Molecular basis for broad neuraminidase immunity: conserved epitopes in seasonal and pandemic H1N1 as well as H5N1 influenza viruses." Journal of virology (2013).

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA T397
Chemical type: Discontinuous protein residues
Discontinuous residues: T397
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks

Epitope: NA N309
Chemical type: Discontinuous protein residues
Discontinuous residues: N309
Source molecule (GenBank): ACA28847.1
Assay category: BCell
Result: Positive
Host:  6 weeks
Reference: Jennifer L Nayak; Shabnam Alam; Andrea J Sant. "Cutting edge: Heterosubtypic influenza infection antagonizes elicitation of immunological reactivity to hemagglutinin." Journal of immunology (Baltimore, Md. : 1950) (2013).

Epitope: HA 162
Chemical type: Peptide from protein
Sequence: RNLLWLTGKNGLYPNLS
Position: 162-178
Source molecule (GenBank): AAP34324.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 162
Chemical type: Peptide from protein
Sequence: RNLLWLTGKNGLYPNLS
Position: 162-178
Source molecule (GenBank): AAP34324.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 386
Chemical type: Peptide from protein
Sequence: NAINGITNKVNSVIEKM
Position: 386-402
Source molecule (GenBank): AAP34324.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: HA 386
Chemical type: Peptide from protein
Sequence: NAINGITNKVNSVIEKM
Position: 386-402
Source molecule (GenBank): AAP34324.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 264
Chemical type: Peptide from protein
Sequence: LILRGSVAHKSCLPACV
Position: 264-280
Source molecule (GenBank): ABF21286.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 264
Chemical type: Peptide from protein
Sequence: LILRGSVAHKSCLPACV
Position: 264-280
Source molecule (GenBank): ABF21286.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 276
Chemical type: Peptide from protein
Sequence: LPACVYGPAVASGYDFE
Position: 276-292
Source molecule (GenBank): ABF21286.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NP 276
Chemical type: Peptide from protein
Sequence: LPACVYGPAVASGYDFE
Position: 276-292
Source molecule (GenBank): ABF21286.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Hidefumi Inaba; Leonard Moise; William Martin; Anne S De Groot; Joe Desrosiers; Ryan Tassone; George Buchman; Takashi Akamizu; Leslie J De Groot. "Epitope recognition in HLA-DR3 transgenic mice immunized to TSH-R protein or peptides." Endocrinology (2013).

Epitope: hTSH-16
Chemical type: Peptide from protein
Sequence: LNKNKYLTVIDKDAFG
Position: 207-222
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-16
Chemical type: Peptide from protein
Sequence: LNKNKYLTVIDKDAFG
Position: 207-222
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-16
Chemical type: Peptide from protein
Sequence: LNKNKYLTVIDKDAFG
Position: 207-222
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-33
Chemical type: Peptide from protein
Sequence: GLKMFPDLTKVYST
Position: 137-150
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-33
Chemical type: Peptide from protein
Sequence: GLKMFPDLTKVYST
Position: 137-150
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Positive
Host:  35-40 days

Epitope: hTSH-33
Chemical type: Peptide from protein
Sequence: GLKMFPDLTKVYST
Position: 137-150
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-35
Chemical type: Peptide from protein
Sequence: EKSKFQDTHNNAHY
Position: 339-352
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Positive-Low
Host:  35-40 days

Epitope: hTSH-35
Chemical type: Peptide from protein
Sequence: EKSKFQDTHNNAHY
Position: 339-352
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Positive-Low
Host:  35-40 days

Epitope: hTSH-35
Chemical type: Peptide from protein
Sequence: EKSKFQDTHNNAHY
Position: 339-352
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-40
Chemical type: Peptide from protein
Sequence: SLSFLHLTRADLSYPSHCC
Position: 266-284
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Positive-Low
Host:  35-40 days

Epitope: hTSH-40
Chemical type: Peptide from protein
Sequence: SLSFLHLTRADLSYPSHCC
Position: 266-284
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-40
Chemical type: Peptide from protein
Sequence: SLSFLHLTRADLSYPSHCC
Position: 266-284
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-9
Chemical type: Peptide from protein
Sequence: PDALKELPLLKFLGIFNTG
Position: 119-137
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-9
Chemical type: Peptide from protein
Sequence: PDALKELPLLKFLGIFNTG
Position: 119-137
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days

Epitope: hTSH-9
Chemical type: Peptide from protein
Sequence: PDALKELPLLKFLGIFNTG
Position: 119-137
Source molecule (GenBank): AAA36783.1
Assay category: BCell
Result: Negative
Host:  35-40 days
Reference: David Oyen; Rainer Wechselberger; Vasundara Srinivasan; Jan Steyaert; John N Barlow. "Mechanistic analysis of allosteric and non-allosteric effects arising from nanobody binding to two epitopes of the dihydrofolate reductase of Escherichia coli." Biochimica et biophysica acta (2013).

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive-Intermediate

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.75

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0090

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.2

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.0

Epitope: Epitope of nanobody Nb113 on DHFR
Chemical type: Discontinuous protein residues
Discontinuous residues: V10, D11, H114, I115, D116, E118, F140, S150, Y151, C152
Source molecule (GenBank): P0ABQ4.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3000000.0
Reference: Kazuma Murakami; Yuko Horikoshi-Sakuraba; Nakaba Murata; Yoshihiro Noda; Yuichi Masuda; Noriaki Kinoshita; Hiroyuki Hatsuta; Shigeo Murayama; Takuji Shirasawa; Takahiko Shimizu; Kazuhiro Irie. "Monoclonal antibody against the turn of the 42-residue amyloid β-protein at positions 22 and 23." ACS chemical neuroscience (2010).

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive-Low

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive

Epitope: E22P-A beta 10-35
Chemical type: Peptide, no natural source
Sequence: YEVHHQKLVFFAPDVGSNKGAIIGLM
Assay category: BCell
Result: Positive
Reference: Tobias Boettler; Philippe P Pagni; Rachel Jaffe; Yang Cheng; Peter Zerhouni; Matthias von Herrath. "The clinical and immunological significance of GAD-specific autoantibody and T-cell responses in type 1 diabetes." Journal of autoimmunity (2013).

Epitope: GAD P6
Chemical type: Peptide from protein
Sequence: DAEKPAESGGSQPPRAAARK
Position: 51-70
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P6
Chemical type: Peptide from protein
Sequence: DAEKPAESGGSQPPRAAARK
Position: 51-70
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P15
Chemical type: Peptide from protein
Sequence: LLQEYNWELADQPQNLEEIL
Position: 141-160
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P15
Chemical type: Peptide from protein
Sequence: LLQEYNWELADQPQNLEEIL
Position: 141-160
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P26
Chemical type: Peptide from protein
Sequence: MMIARFKMFPEVKEKGMAAL
Position: 251-270
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P26
Chemical type: Peptide from protein
Sequence: MMIARFKMFPEVKEKGMAAL
Position: 251-270
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P54
Chemical type: Peptide from protein
Sequence: PVIKARMMEYGTTMVSYQPL
Position: 531-550
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P54
Chemical type: Peptide from protein
Sequence: PVIKARMMEYGTTMVSYQPL
Position: 531-550
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P57
Chemical type: Peptide from protein
Sequence: ISNPAATHQDIDFLIEEIER
Position: 561-580
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: GAD P57
Chemical type: Peptide from protein
Sequence: ISNPAATHQDIDFLIEEIER
Position: 561-580
Source molecule (GenBank): Q05329.1
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Anna Jarząb; Danuta Witkowska; Edmund Ziomek; Anna Dąbrowska; Zbigniew Szewczuk; Andrzej Gamian. "Shigella flexneri 3a outer membrane protein C epitope is recognized by human umbilical cord sera and associated with protective activity." PloS one (2013).

Epitope: OmpC (157-176)
Chemical type: Peptide from protein
Sequence: EGEGMTNNGREALRQNGDGV
Position: 157-176
Source molecule (GenBank): AGL42381.1
Assay category: BCell
Result: Negative

Epitope: OmpC (157-176)
Chemical type: Peptide from protein
Sequence: EGEGMTNNGREALRQNGDGV
Position: 157-176
Source molecule (GenBank): AGL42381.1
Assay category: BCell
Result: Negative
Host: F

Epitope: OmpC (157-176)
Chemical type: Peptide from protein
Sequence: EGEGMTNNGREALRQNGDGV
Position: 157-176
Source molecule (GenBank): AGL42381.1
Assay category: BCell
Result: Negative
Host:  6-7 weeks

Epitope: OmpC (1-12)
Chemical type: Peptide from protein
Sequence: AEVYNKDGNKLD
Position: 1-12
Source molecule (GenBank): AGL42381.1
Assay category: BCell
Result: Negative
Host:  6-7 weeks

Epitope: OmpC (1-12)
Chemical type: Peptide from protein
Sequence: AEVYNKDGNKLD
Position: 1-12
Source molecule (GenBank): AGL42381.1
Assay category: BCell
Result: Negative
Host: F

Epitope: OmpC (1-12)
Chemical type: Peptide from protein
Sequence: AEVYNKDGNKLD
Position: 1-12
Source molecule (GenBank): AGL42381.1
Assay category: BCell
Result: Negative
Reference: Joanne M O'Hara; Nicholas J Mantis. "Neutralizing monoclonal antibodies against ricin's enzymatic subunit interfere with protein disulfide isomerase-mediated reduction of ricin holotoxin in vitro." Journal of immunological methods (2013).

Epitope: Ricin (223-240)
Chemical type: Peptide from protein
Sequence: QGAFASPIQLQRRNGSKF
Position: 258-275
Source molecule (GenBank): P02879.1
Assay category: BCell
Result: Positive
Quantitative measurement: 10.7
Host: F 10-12 weeks
Reference: Katendi Changula; Reiko Yoshida; Osamu Noyori; Andrea Marzi; Hiroko Miyamoto; Mari Ishijima; Ayaka Yokoyama; Masahiro Kajihara; Heinz Feldmann; Aaron S Mweene; Ayato Takada. "Mapping of conserved and species-specific antibody epitopes on the Ebola virus nucleoprotein." Virus research (2013).

Epitope: EBOV NP (421-430)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFP
Position: 421-430
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-430)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFP
Position: 421-430
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-430)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFP
Position: 421-430
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-430)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFP
Position: 421-430
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-430)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFP
Position: 421-430
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-430)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFP
Position: 421-430
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-440)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFPGPINDDDNPG
Position: 421-440
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-440)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFPGPINDDDNPG
Position: 421-440
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-440)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFPGPINDDDNPG
Position: 421-440
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-440)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFPGPINDDDNPG
Position: 421-440
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-440)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFPGPINDDDNPG
Position: 421-440
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (421-440)
Chemical type: Peptide from protein
Sequence: YDDDDDIPFPGPINDDDNPG
Position: 421-440
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (611-630)
Chemical type: Peptide from protein
Sequence: YRDHSEKKELPQDEQQDQDH
Position: 611-630
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks

Epitope: EBOV NP (611-630)
Chemical type: Peptide from protein
Sequence: YRDHSEKKELPQDEQQDQDH
Position: 611-630
Source molecule (GenBank): AAG40164.1
Assay category: BCell
Result: Positive
Host: F 6 weeks
Reference: Kevin B Walsh; John Sidney; Megan Welch; Daniel M Fremgen; Alessandro Sette; Michael B A Oldstone. "CD8+ T-cell epitope mapping for pneumonia virus of mice in H-2b mice." Journal of virology (2013).

Epitope: INYSALNL
Chemical type: Peptide from protein
Sequence: INYSALNL
Position: 363-370
Source molecule (GenBank): AFM72739.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: INYSALNL
Chemical type: Peptide from protein
Sequence: INYSALNL
Position: 363-370
Source molecule (GenBank): AFM72739.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 15281.0

Epitope: INYSALNL
Chemical type: Peptide from protein
Sequence: INYSALNL
Position: 363-370
Source molecule (GenBank): AFM72739.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 82.0
Reference: Laxmi N Sarangi; Jajati K Mohapatra; Saravanan Subramaniam; Aniket Sanyal; Bramhadev Pattnaik. "Antigenic site variation in foot-and-mouth disease virus serotype O grown under vaccinal serum antibodies in vitro." Virus research (2013).

Epitope: FMDV site 3 VP1
Chemical type: Discontinuous protein residues
Discontinuous residues: K41, K45, I48, L51
Source molecule (GenBank): ABI16232.1
Assay category: BCell
Result: Positive

Epitope: FMDV VP3
Chemical type: Discontinuous protein residues
Discontinuous residues: S8, D71, A75, E131, T174, N179, R219
Source molecule (GenBank): AFE84738.1
Assay category: BCell
Result: Positive
Reference: Salvatore G De-Simone; Paloma Napoleão-Pego; Luiz A L Teixeira-Pinto; Jonathas D L Santos; Thatiane S De-Simone; Anibal R Melgarejo; Aniesse S Aguiar; Daniela P Marchi-Salvador. "Linear B-cell epitopes in BthTX-1, BthTX-II and BthA-1, phospholipase A₂'s from Bothrops jararacussu snake venom, recognized by therapeutically neutralizing commercial horse antivenom." Toxicon : official journal of the International Society on Toxinology (2013).

Epitope: A20
Chemical type: Peptide from protein
Sequence: LRENLGTYNKKYRY
Position: 112-125
Source molecule (GenBank): Q90249.3
Assay category: BCell
Result: Negative

Epitope: A20
Chemical type: Peptide from protein
Sequence: LRENLGTYNKKYRY
Position: 112-125
Source molecule (GenBank): Q90249.3
Assay category: BCell
Result: Negative

Epitope: B7
Chemical type: Peptide from protein
Sequence: PKDATDRCCFVHDC
Position: 52-65
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B8
Chemical type: Peptide from protein
Sequence: DRCCFVHDCCYGKL
Position: 57-70
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B8
Chemical type: Peptide from protein
Sequence: DRCCFVHDCCYGKL
Position: 57-70
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B9
Chemical type: Peptide from protein
Sequence: DRCCFVHDCCYGKL
Position: 57-70
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B9
Chemical type: Peptide from protein
Sequence: DRCCFVHDCCYGKL
Position: 57-70
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B10
Chemical type: Peptide from protein
Sequence: YGKLTNCKPKTDRY
Position: 67-80
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B10
Chemical type: Peptide from protein
Sequence: YGKLTNCKPKTDRY
Position: 67-80
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B17
Chemical type: Peptide from protein
Sequence: CECDKAAAVCFREN
Position: 102-115
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: B17
Chemical type: Peptide from protein
Sequence: CECDKAAAVCFREN
Position: 102-115
Source molecule (GenBank): P45881.1
Assay category: BCell
Result: Negative

Epitope: C11
Chemical type: Peptide from protein
Sequence: IDSYTYSKKNGDVV
Position: 77-90
Source molecule (GenBank): Q8AXY1.1
Assay category: BCell
Result: Negative

Epitope: C11
Chemical type: Peptide from protein
Sequence: IDSYTYSKKNGDVV
Position: 77-90
Source molecule (GenBank): Q8AXY1.1
Assay category: BCell
Result: Negative