LiteFold/IEDB huggingface dataset:
Reference: Tomoyuki Yamaguchi; Toshie Shinagawa; Hisanobu Kobata; Hidemitsu Nakagawa. "Immunity against seasonal human coronavirus OC43 mitigates fatal deterioration of COVID-19." International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases (2021).

Epitope: OC43 S 906-919
Chemical type: Peptide from protein
Sequence: SKASSRSAIEDLLF
Position: 906-919
Source molecule (GenBank): AAR01015.1
Assay category: BCell
Result: Positive

Epitope: OC43 S 906-919
Chemical type: Peptide from protein
Sequence: SKASSRSAIEDLLF
Position: 906-919
Source molecule (GenBank): AAR01015.1
Assay category: BCell
Result: Positive
Host:  13-96 years
Reference: Eszter Somogyi; Zsolt Csiszovszki; Levente Molnár; Orsolya Lőrincz; József Tóth; Sofie Pattijn; Jana Schockaert; Aurélie Mazy; István Miklós; Katalin Pántya; Péter Páles; Enikő R Tőke. "A Peptide Vaccine Candidate Tailored to Individuals' Genetics Mimics the Multi-Targeted T Cell Immunity of COVID-19 Convalescent Subjects." Frontiers in genetics (2021).

Epitope: s2 9-mer
Chemical type: Peptide from protein
Sequence: STQDLFLPF
Position: 50-58
Source molecule (GenBank): YP_009724390.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: n2 9-mer
Chemical type: Peptide from protein
Sequence: KAYNVTQAF
Position: 266-274
Source molecule (GenBank): YP_009724397.2
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Bonnie Douglas; Yun Wei; Xinshe Li; Annabel Ferguson; Li-Yin Hung; Christopher Pastore; Jonathan R Kurtz; James B McLachlan; Thomas J Nolan; James Lok; De'Broski R Herbert. "Transgenic expression of a T cell epitope in Strongyloides ratti reveals that helminth-specific CD4+ T cells constitute both Th2 and Treg populations." PLoS pathogens (2021).

Epitope: 2W1S
Chemical type: Peptide, no natural source
Sequence: EAWGALANWAVDSA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: 2W1S
Chemical type: Peptide, no natural source
Sequence: EAWGALANWAVDSA
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: 2W1S
Chemical type: Peptide, no natural source
Sequence: EAWGALANWAVDSA
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: 2W1S
Chemical type: Peptide, no natural source
Sequence: EAWGALANWAVDSA
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: 2W1S
Chemical type: Peptide, no natural source
Sequence: EAWGALANWAVDSA
Assay category: TCell
Result: Negative

Epitope: 2W1S
Chemical type: Peptide, no natural source
Sequence: EAWGALANWAVDSA
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo
Reference: Alessia Melacarne; Valentina Ferrari; Luca Tiraboschi; Michele Mishto; Juliane Liepe; Marina Aralla; Laura Marconato; Michela Lizier; Chiara Pozzi; Offer Zeira; Giuseppe Penna; Maria Rescigno. "Identification of a class of non-conventional ER-stress-response-derived immunogenic peptides." Cell reports (2021).

Epitope: HMGA1_89-107
Chemical type: Peptide from protein
Sequence: KLEKEEEEGISQESSEEEQ
Position: 89-107
Source molecule (GenBank): P17096.3
Assay category: TCell
Result: Positive
MHC allele types: 143
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: H2BFT_2-20
Chemical type: Peptide from protein
Sequence: PEPAKSAPAPKKGSKKAVT
Position: 2-20
Source molecule (GenBank): O60814.3
Assay category: TCell
Result: Positive
MHC allele types: 143
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Lijin Li; Xiuli Zhang; Xiaoli Wang; Samuel W Kim; John M Herndon; Michelle K Becker-Hapak; Beatriz M Carreno; Nancy B Myers; Mark A Sturmoski; Michael D McLellan; Christopher A Miller; Tanner M Johanns; Benjamin R Tan; Gavin P Dunn; Timothy P Fleming; Ted H Hansen; S Peter Goedegebuure; William E Gillanders. "Optimized polyepitope neoantigen DNA vaccines elicit neoantigen-specific immune responses in preclinical models and in clinical translation." Genome medicine (2021).

Epitope: Cenpf.D1327E
Chemical type: Peptide, no natural source
Sequence: RVEKLQLESELNESRTECITATSQMTA
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: Itprip.A15G
Chemical type: Peptide, no natural source
Sequence: MAMELFRVCLVVVTGIINHPLLFPRENAT
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: CLPB:p.R679H
Chemical type: Peptide, no natural source
Sequence: PSPQAEKRLPKLHLEIIDKDSKTRR
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Adi Nagler; Shelly Kalaora; Chaya Barbolin; Anastasia Gangaev; Steven L C Ketelaars; Michal Alon; Joy Pai; Gil Benedek; Yfat Yahalom-Ronen; Noam Erez; Polina Greenberg; Gal Yagel; Aviyah Peri; Yishai Levin; Ansuman T Satpathy; Erez Bar-Haim; Nir Paran; Pia Kvistborg; Yardena Samuels. "Identification of presented SARS-CoV-2 HLA class I and HLA class II peptides using HLA peptidomics." Cell reports (2021).

Epitope: CoV-2 M9
Chemical type: Peptide from protein
Sequence: RTLSYYKLGASQRVA
Position: 174-188
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 M9
Chemical type: Peptide from protein
Sequence: RTLSYYKLGASQRVA
Position: 174-188
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 M9
Chemical type: Peptide from protein
Sequence: RTLSYYKLGASQRVA
Position: 174-188
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 M9
Chemical type: Peptide from protein
Sequence: RTLSYYKLGASQRVA
Position: 174-188
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 M14
Chemical type: Peptide from protein
Sequence: SRTLSYYKLGASQRVAG
Position: 173-189
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 M14
Chemical type: Peptide from protein
Sequence: SRTLSYYKLGASQRVAG
Position: 173-189
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 M14
Chemical type: Peptide from protein
Sequence: SRTLSYYKLGASQRVAG
Position: 173-189
Source molecule (GenBank): QXL04073.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 ORF1ab 1
Chemical type: Peptide from protein
Sequence: STTTNIVTR
Position: 2156-2164
Source molecule (GenBank): QTC58589.1
Assay category: MhcLigandElution
Result: Positive

Epitope: CoV-2 N18
Chemical type: Peptide from protein
Sequence: TKAYNVTQAFGRRGPE
Position: 265-280
Source molecule (GenBank): QSM17284.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 18 21 69 656 94 101 316 323 413 436
Reference: Chao Hu; Meiying Shen; Xiaojian Han; Qian Chen; Luo Li; Siyin Chen; Jing Zhang; Fengxia Gao; Wang Wang; Yingming Wang; Tingting Li; Shenglong Li; Jingjing Huang; Jianwei Wang; Ju Zhu; Dan Chen; Qingchen Wu; Kun Tao; Da Pang; Aishun Jin. "Identification of cross-reactive CD8<sup>+</sup> T cell receptors with high functional avidity to a SARS-CoV-2 immunodominant epitope and its natural mutant variants." Genes & diseases (2022).

Epitope: CoV-2 S P4
Chemical type: Peptide from protein
Sequence: RLDKVEAEV
Position: 983-991
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CoV-2 S P43
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CoV-2 S P56
Chemical type: Peptide from protein
Sequence: AYSNNSIAI
Position: 706-714
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CoV-2 S P30
Chemical type: Peptide from protein
Sequence: GVYYHKNNK
Position: 142-150
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CoV-2 S P32
Chemical type: Peptide from protein
Sequence: RLFRKSNLK
Position: 454-462
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CoV-2 N P67
Chemical type: Peptide from protein
Sequence: FTALTQHGK
Position: 53-61
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Jennifer L Remmel; Julia C Frei; Savannah E Butler; Jonathan R Lai; Margaret E Ackerman. "Diverse contributions of avidity to the broad neutralization of Dengue virus by antibodies targeting the E dimer epitope." Virology (2021).

Epitope: Epitope of EDE2 A11 on DENV-2 Env
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T68, T69, T70, E71, S72, V97, D98, R99, W101, G102, N103, G104, K246, K247, Q248, D249; B: G152, N153, D154, T155, K157
Source molecule (GenBank): AFQ95456.1
Assay category: BCell
Result: Positive

Epitope: Epitope of EDE2 A11 on DENV-2 Env
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T68, T69, T70, E71, S72, V97, D98, R99, W101, G102, N103, G104, K246, K247, Q248, D249; B: G152, N153, D154, T155, K157
Source molecule (GenBank): AFQ95456.1
Assay category: BCell
Result: Positive

Epitope: Epitope of EDE2 A11 on DENV-2 Env
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T68, T69, T70, E71, S72, V97, D98, R99, W101, G102, N103, G104, K246, K247, Q248, D249; B: G152, N153, D154, T155, K157
Source molecule (GenBank): AFQ95456.1
Assay category: BCell
Result: Positive

Epitope: Epitope of EDE2 A11 on DENV-2 Env
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T68, T69, T70, E71, S72, V97, D98, R99, W101, G102, N103, G104, K246, K247, Q248, D249; B: G152, N153, D154, T155, K157
Source molecule (GenBank): AFQ95456.1
Assay category: BCell
Result: Positive
Quantitative measurement: 1.33

Epitope: Epitope of EDE2 A11 on DENV-2 Env
Chemical type: Region on multi-chain protein
Discontinuous residues: A: T68, T69, T70, E71, S72, V97, D98, R99, W101, G102, N103, G104, K246, K247, Q248, D249; B: G152, N153, D154, T155, K157
Source molecule (GenBank): AFQ95456.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0000145
Reference: Johannes Gebert; Ozkan Gelincik; Mine Oezcan-Wahlbrink; Jason D Marshall; Alejandro Hernandez-Sanchez; Katharina Urban; Mark Long; Eduardo Cortes; Elena Tosti; Eva-Maria Katzenmaier; Yurong Song; Ali Elsaadi; Nan Deng; Eduardo Vilar; Vera Fuchs; Nina Nelius; Yan P Yuan; Aysel Ahadova; Shizuko Sei; Robert H Shoemaker; Asad Umar; Lei Wei; Song Liu; Peer Bork; Winfried Edelmann; Magnus von Knebel Doeberitz; Steven M Lipkin; Matthias Kloor. "Recurrent Frameshift Neoantigen Vaccine Elicits Protective Immunity With Reduced Tumor Burden and Improved Overall Survival in a Lynch Syndrome Mouse Model." Gastroenterology (2021).

Epitope: Sdccag1 FS(-1)
Chemical type: Peptide from protein
Sequence: EAPKGKKKSKRTSSCRSRRRTSRCL
Assay category: TCell
Result: Negative
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Özcan Çınar; Bernadette Brzezicha; Corinna Grunert; Peter Michael Kloetzel; Christin Beier; Caroline Anna Peuker; Ulrich Keller; Antonio Pezzutto; Antonia Busse. "High-affinity T-cell receptor specific for MyD88 L265P mutation for adoptive T-cell therapy of B-cell malignancies." Journal for immunotherapy of cancer (2021).

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: MyD88 L265P 264-273
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered
Reference: Song Liu; Junko Matsuzaki; Lei Wei; Takemasa Tsuji; Sebastiano Battaglia; Qiang Hu; Eduardo Cortes; Laiping Wong; Li Yan; Mark Long; Anthony Miliotto; Nicholas W Bateman; Shashikant B Lele; Thinle Chodon; Richard C Koya; Song Yao; Qianqian Zhu; Thomas P Conrads; Jianmin Wang; George L Maxwell; Amit A Lugade; Kunle Odunsi. "Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer." Journal for immunotherapy of cancer (2019).

Epitope: SLK Q838L
Chemical type: Peptide, no natural source
Sequence: QELRELRFLLKEEQ
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: ovary
Culture conditions: Short Term Restimulated

Epitope: TP53 S241F
Chemical type: Peptide, no natural source
Sequence: SFCMGGMNR
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: IL27RA P594L
Chemical type: Peptide, no natural source
Sequence: EEMEPLPVM
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: ovary
Culture conditions: Short Term Restimulated

Epitope: CACNA1A Q1674L
Chemical type: Peptide, no natural source
Sequence: RAARLIKLLRL
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: CREBBP R386L
Chemical type: Peptide, no natural source
Sequence: CSLPHCLTM
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MAN1A2 I529F
Chemical type: Peptide, no natural source
Sequence: YFLRPEVIETYWY
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: MAN1A2 I529F
Chemical type: Peptide, no natural source
Sequence: YFLRPEVIETYWY
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: OR6C65 G265S
Chemical type: Peptide, no natural source
Sequence: FMCVKTSAKESMAL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: BRWD3 A1163V
Chemical type: Peptide, no natural source
Sequence: LDFVSPFAVPVDLS
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Juan Zhao; Ling Wang; Madison Schank; Xindi Dang; Zeyuan Lu; Dechao Cao; Sushant Khanal; Lam N Nguyen; Lam N T Nguyen; Jinyu Zhang; Yi Zhang; James L Adkins; Evan M Baird; Xiao Y Wu; Shunbin Ning; Mohamed El Gazzar; Jonathan P Moorman; Zhi Q Yao. "SARS-CoV-2 specific memory T cell epitopes identified in COVID-19-recovered subjects." Virus research (2021).

Epitope: S-81
Chemical type: Peptide from protein
Sequence: QPTESIVRFPNITNL
Position: 321-335
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Host:  20-54 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S-81
Chemical type: Peptide from protein
Sequence: QPTESIVRFPNITNL
Position: 321-335
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Host:  20-54 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S-81
Chemical type: Peptide from protein
Sequence: QPTESIVRFPNITNL
Position: 321-335
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Host:  20-54 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S-89
Chemical type: Peptide from protein
Sequence: WNRKRISNCVADYSV
Position: 353-367
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Host:  20-54 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: S-119
Chemical type: Peptide from protein
Sequence: YQAGSTPCNGVEGFN
Position: 473-487
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Host:  20-54 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Shuya Mitoma; Brigid Veronica Carr; Yongjie Harvey; Katy Moffat; Satoshi Sekiguchi; Bryan Charleston; Junzo Norimine; Julian Seago. "The detection of long-lasting memory foot-and-mouth disease (FMD) virus serotype O-specific CD4<sup>+</sup> T cells from FMD-vaccinated cattle by bovine major histocompatibility complex class II tetramer." Immunology (2021).

Epitope: VP2 p162
Chemical type: Peptide from protein
Sequence: YATAEDFVSGPNTSG
Position: 322-336
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP2 p174
Chemical type: Peptide from protein
Sequence: DSYAYMRNGWDVEVT
Position: 382-396
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP2 p186
Chemical type: Peptide from protein
Sequence: AHITVPFVGVNRYDQ
Position: 442-456
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP2 p189
Chemical type: Peptide from protein
Sequence: YKVHKPWTLVVMVVA
Position: 457-471
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP3 p205
Chemical type: Peptide from protein
Sequence: FTNFLDVAEACPTFL
Position: 545-559
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP3 p236
Chemical type: Peptide from protein
Sequence: GDALVVLASAGKDFE
Position: 700-714
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP1 p251
Chemical type: Peptide from protein
Sequence: LVGALLRTATYYFAD
Position: 785-799
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP1 p253
Chemical type: Peptide from protein
Sequence: YYFADLEVAVKHEGN
Position: 795-809
Source molecule (GenBank): AAT01766.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: VP1 p269
Chemical type: Peptide from protein
Sequence: LAQKAARTLPTSFNY
Position: 875-889
Source molecule (GenBank): AAT01779.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Frauke Muecksch; Yiska Weisblum; Christopher O Barnes; Fabian Schmidt; Dennis Schaefer-Babajew; Zijun Wang; Julio C C Lorenzi; Andrew I Flyak; Andrew T DeLaitsch; Kathryn E Huey-Tubman; Shurong Hou; Celia A Schiffer; Christian Gaebler; Justin Da Silva; Daniel Poston; Shlomo Finkin; Alice Cho; Melissa Cipolla; Thiago Y Oliveira; Katrina G Millard; Victor Ramos; Anna Gazumyan; Magdalena Rutkowska; Marina Caskey; Michel C Nussenzweig; Pamela J Bjorkman; Theodora Hatziioannou; Paul D Bieniasz. "Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations." Immunity (2021).

Epitope: Epitope of C548 Fab on SARS-CoV-2 S
Chemical type: Region on multi-chain protein
Discontinuous residues: B: V445, G446, G447, Y449, N450, L452, Y453, L455, F456, G482, V483, E484, G485, F486, Y489, F490, Q493, S494, G496, Q498; E: A372, S373, N440, L441
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive

Epitope: Epitope of C548 Fab on SARS-CoV-2 S
Chemical type: Region on multi-chain protein
Discontinuous residues: B: V445, G446, G447, Y449, N450, L452, Y453, L455, F456, G482, V483, E484, G485, F486, Y489, F490, Q493, S494, G496, Q498; E: A372, S373, N440, L441
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive

Epitope: Epitope of C548 Fab on SARS-CoV-2 S
Chemical type: Region on multi-chain protein
Discontinuous residues: B: V445, G446, G447, Y449, N450, L452, Y453, L455, F456, G482, V483, E484, G485, F486, Y489, F490, Q493, S494, G496, Q498; E: A372, S373, N440, L441
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive
Quantitative measurement: 2.828

Epitope: Epitope of C548 Fab on SARS-CoV-2 S
Chemical type: Region on multi-chain protein
Discontinuous residues: B: V445, G446, G447, Y449, N450, L452, Y453, L455, F456, G482, V483, E484, G485, F486, Y489, F490, Q493, S494, G496, Q498; E: A372, S373, N440, L441
Source molecule (GenBank): QHD43416.1
Assay category: BCell
Result: Positive