LiteFold/IEDB huggingface dataset:
Reference: Jinzhu Ma; Yuhua Wei; Limeng Zhang; Xintong Wang; Di Yao; Daolong Liu; Wei Liu; Simiao Yu; Yongzhong Yu; Zhijun Wu; Liquan Yu; Zhanbo Zhu; Yudong Cui. "Identification of a novel linear B-cell epitope as a vaccine candidate in the N2N3 subdomain of Staphylococcus aureus fibronectin-binding protein A." Journal of medical microbiology (2018).

Epitope: phage 6
Chemical type: Peptide, no natural source
Sequence: QDFARDSHTRFS
Assay category: BCell
Result: Positive
Host: F 8 weeks
Reference: Emily N Gallichotte; Thomas J Baric; Boyd L Yount; Douglas G Widman; Anna Durbin; Steve Whitehead; Ralph S Baric; Aravinda M de Silva. "Human dengue virus serotype 2 neutralizing antibodies target two distinct quaternary epitopes." PLoS pathogens (2018).

Epitope: mAb 3F9 (EDI specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K160, E161, I162, K163, I170, T171, A173, E174, T176, G177, T180
Source molecule (GenBank): ABW06583.1
Assay category: BCell
Result: Positive

Epitope: mAb 3F9 (EDI specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K160, E161, I162, K163, I170, T171, A173, E174, T176, G177, T180
Source molecule (GenBank): ABW06583.1
Assay category: BCell
Result: Positive

Epitope: mAb 3F9 (EDI specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K160, E161, I162, K163, I170, T171, A173, E174, T176, G177, T180
Source molecule (GenBank): ABW06583.1
Assay category: BCell
Result: Positive

Epitope: mAb 3F9 (EDI specific)
Chemical type: Discontinuous protein residues
Discontinuous residues: K160, E161, I162, K163, I170, T171, A173, E174, T176, G177, T180
Source molecule (GenBank): ABW06583.1
Assay category: BCell
Result: Positive
Reference: Jinjing Tan; Xiaoguang Wu; Suting Chen; Meng Gu; Hairong Huang; Wentao Yue. "Utility of dominant epitopes derived from cell-wall protein LppZ for immunodiagnostic of pulmonary tuberculosis." BMC immunology (2018).

Epitope: LppZ-10
Chemical type: Peptide from protein
Sequence: VRLAPSTGAVTGEPD
Position: 352-366
Source molecule (GenBank): COV25996.1
Assay category: BCell
Result: Positive
Host:  mean: 46.7 years

Epitope: LppZ-16
Chemical type: Peptide from protein
Sequence: FPQGGGFPRNNDDKT
Position: 410-424
Source molecule (GenBank): COV25996.1
Assay category: BCell
Result: Positive
Host:  mean: 46.7 years
Reference: Ruiying Liang; Yaping Sun; Yanjie Liu; Junya Wang; Yanan Wu; Zibin Li; Lizhen Ma; Nan Zhang; Lijie Zhang; Xiaohui Wei; Zehui Qu; Nianzhi Zhang; Chun Xia. "Major Histocompatibility Complex Class I (FLA-E*01801) Molecular Structure in Domestic Cats Demonstrates Species-Specific Characteristics in Presenting Viral Antigen Peptides." Journal of virology (2018).

Epitope: RMA9-P5A
Chemical type: Peptide, no natural source
Sequence: RMANASTGR
Assay category: MhcBinding
Result: Positive

Epitope: RMA9-P5A
Chemical type: Peptide, no natural source
Sequence: RMANASTGR
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 40.8
Epitope: SIV Nef 241-255
Chemical type: Peptide from protein
Sequence: EEEVRRRLTARGLLN
Position: 241-255
Source molecule (GenBank): AQY14404.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Influenza M1 29-43
Chemical type: Peptide from protein
Sequence: ESVFAGKNTDLEALM
Position: 29-43
Source molecule (GenBank): AEE69010.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Influenza NP 197-211
Chemical type: Peptide from protein
Sequence: IKRGINDRNFWRGEN
Position: 197-211
Source molecule (GenBank): ACP41106.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SIV Gag 273-287
Chemical type: Peptide from protein
Sequence: KCVRMYNPTNILDVK
Position: 273-287
Source molecule (GenBank): AAA47632.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SIV Gag 269-283
Chemical type: Peptide from protein
Sequence: LGLQKCVRMYNPTNI
Position: 269-283
Source molecule (GenBank): AAA47632.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SIV Gag 177-191
Chemical type: Peptide from protein
Sequence: LSEGCTPYDINQMLN
Position: 177-191
Source molecule (GenBank): AAA47632.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: Mtb ESAT6 5-19
Chemical type: Peptide from protein
Sequence: QWNFAGIEAAASAIQ
Position: 5-19
Source molecule (GenBank): P0A565.2
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SIV Nef 137-151
Chemical type: Peptide from protein
Sequence: RRHRILDIYLEKEEG
Position: 137-151
Source molecule (GenBank): AQY14404.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Epitope: Kgp16
Chemical type: Peptide from protein
Sequence: PATGPLFTGTASSNL
Position: 773-787
Source molecule (GenBank): WP_012458488.1
Assay category: BCell
Result: Positive
Reference: K M Okoniewska; A E Kedzierska; J Okoniewski; A Slawek; K Grzymajlo; A Chelmonska-Soyta; T Grabowski. "New tregitopes inducing adaptive regulatory T cells in mice." Journal of physiology and pharmacology : an official journal of the Polish Physiological Society (2017).

Epitope: SLR
Chemical type: Peptide from protein
Sequence: SLRSAHLVGQTILSG
Position: 83-97
Source molecule (GenBank): P01555.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 23.1

Epitope: NHH
Chemical type: Peptide from protein
Sequence: NHHNMLLSLSTSGVL
Assay category: TCell
Result: Positive-Low
Host: F 6-8 weeks
Cell type: T cell CD4+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: NHH
Chemical type: Peptide from protein
Sequence: NHHNMLLSLSTSGVL
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 5.41
Reference: Petra Ménová; Mauro Sella; Katrin Sellrie; Claney L Pereira; Peter H Seeberger. "Identification of the Minimal Glycotope of Streptococcus pneumoniae 7F Capsular Polysaccharide using Synthetic Oligosaccharides." Chemistry (Weinheim an der Bergstrasse, Germany) (2018).

Epitope: hexasaccharide structure 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive
Host:  18-45 years
Reference: Lisa C Lindesmith; Paul D Brewer-Jensen; Michael L Mallory; Kari Debbink; Excel W Swann; Jan Vinjé; Ralph S Baric. "Antigenic Characterization of a Novel Recombinant GII.P16-GII.4 Sydney Norovirus Strain With Minor Sequence Variation Leading to Antibody Escape." The Journal of infectious diseases (2018).

Epitope: mAb NVB 97
Chemical type: Discontinuous protein residues
Discontinuous residues: S393
Source molecule (GenBank): ANP93598.1
Assay category: BCell
Result: Positive
Reference: Feng-Shan Gao; Xiao-Xin Zhai; Ping Jiang; Qiang Zhang; Hua Gao; Zi-Bin Li; Yong Han; Jie Yang; Zong-Hui Zhang. "Identification of two novel foot-and-mouth disease virus cytotoxic T lymphocyte epitopes that can bind six SLA-I proteins." Gene (2018).

Epitope: Q01
Chemical type: Peptide from protein
Sequence: ATRVTELLY
Position: 894-902
Source molecule (GenBank): ABF00114.1
Assay category: TCell
Result: Positive
Host: M 2 months
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Q01
Chemical type: Peptide from protein
Sequence: ATRVTELLY
Position: 894-902
Source molecule (GenBank): ABF00114.1
Assay category: TCell
Result: Positive
Host: M 2 months
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Q01
Chemical type: Peptide from protein
Sequence: ATRVTELLY
Position: 894-902
Source molecule (GenBank): ABF00114.1
Assay category: MhcBinding
Result: Positive-High
Reference: S Hollingshead; I Jongerius; R M Exley; S Johnson; S M Lea; C M Tang. "Structure-based design of chimeric antigens for multivalent protein vaccines." Nature communications (2018).

Epitope: VR2 loop P1.10_1
Chemical type: Peptide from protein
Sequence: HFVQNKQNQPPTLVP
Position: 195-209
Source molecule (GenBank): WP_101131544.1
Assay category: BCell
Result: Positive
Host: F >6 weeks

Epitope: VR2 loop P1.9
Chemical type: Peptide from protein
Sequence: YVDEQSKYHA
Position: 195-204
Source molecule (GenBank): WP_101120070.1
Assay category: BCell
Result: Positive
Host: F >6 weeks

Epitope: VR2 loop P1.9
Chemical type: Peptide from protein
Sequence: YVDEQSKYHA
Position: 195-204
Source molecule (GenBank): WP_101120070.1
Assay category: BCell
Result: Positive
Reference: Daniela Fera; Matthew S Lee; Kevin Wiehe; R Ryan Meyerhoff; Alessandro Piai; Mattia Bonsignori; Baptiste Aussedat; William E Walkowicz; Therese Ton; Jeffrey O Zhou; Samuel Danishefsky; Barton F Haynes; Stephen C Harrison. "HIV envelope V3 region mimic embodies key features of a broadly neutralizing antibody lineage epitope." Nature communications (2018).

Epitope: Man9
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Quantitative measurement: 2.85
Host: M
Reference: Kok Fei Chan; Benjamin S Gully; Stephanie Gras; Dennis X Beringer; Lars Kjer-Nielsen; Jonathan Cebon; James McCluskey; Weisan Chen; Jamie Rossjohn. "Divergent T-cell receptor recognition modes of a HLA-I restricted extended tumour-associated peptide." Nature communications (2018).

Epitope: NY-ESO-1 (60-72) P2A
Chemical type: Peptide, no natural source
Sequence: AARGPHGGAASGL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NY-ESO-1 (60-72) P2A
Chemical type: Peptide, no natural source
Sequence: AARGPHGGAASGL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NY-ESO-1 (60-72) P2A
Chemical type: Peptide, no natural source
Sequence: AARGPHGGAASGL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NY-ESO-1 (60-72) G12A
Chemical type: Peptide, no natural source
Sequence: APRGPHGGAASAL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NY-ESO-1 (60-72) G12A
Chemical type: Peptide, no natural source
Sequence: APRGPHGGAASAL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NY-ESO-1 (60-72) G12A
Chemical type: Peptide, no natural source
Sequence: APRGPHGGAASAL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Pablo San Segundo-Acosta; María Garranzo-Asensio; Carmen Oeo-Santos; Ana Montero-Calle; Joaquín Quiralte; Javier Cuesta-Herranz; Mayte Villalba; Rodrigo Barderas. "High-throughput screening of T7 phage display and protein microarrays as a methodological approach for the identification of IgE-reactive components." Journal of immunological methods (2018).

Epitope: MUST2
Chemical type: Peptide, no natural source
Sequence: GRKEVSRRFXRDAETGKPLPRKGP
Assay category: BCell
Result: Negative

Epitope: MUST2
Chemical type: Peptide, no natural source
Sequence: GRKEVSRRFXRDAETGKPLPRKGP
Assay category: BCell
Result: Positive

Epitope: MUST9
Chemical type: Peptide, no natural source
Sequence: PAGISRELVDKL
Assay category: BCell
Result: Positive

Epitope: MUST9
Chemical type: Peptide, no natural source
Sequence: PAGISRELVDKL
Assay category: BCell
Result: Negative
Reference: Ling-Chu Hung; Cheng-Yao Yang; Ivan-Chen Cheng. "Peptides mimicking viral proteins of porcine circovirus type 2 were profiled by the spectrum of mouse anti-PCV2 antibodies." BMC immunology (2017).

Epitope: N3
Chemical type: Peptide from protein
Sequence: MGLGSASSILLAGHVAAEVLPRCCRCRSALVILTAHEFRFQI
Assay category: BCell
Result: Negative
Host: F 5 weeks

Epitope: N3
Chemical type: Peptide from protein
Sequence: MGLGSASSILLAGHVAAEVLPRCCRCRSALVILTAHEFRFQI
Assay category: BCell
Result: Positive
Host:  1 day-6 months

Epitope: N3
Chemical type: Peptide from protein
Sequence: MGLGSASSILLAGHVAAEVLPRCCRCRSALVILTAHEFRFQI
Assay category: BCell
Result: Negative
Host: F 5 weeks
Reference: Matthew J Atherton; Kyle B Stephenson; Jake K Nikota; Qian N Hu; Andrew Nguyen; Yonghong Wan; Brian D Lichty. "Preclinical development of peptide vaccination combined with oncolytic MG1-E6E7 for HPV-associated cancer." Vaccine (2018).

Epitope: E6 (25-39)
Chemical type: Peptide from protein
Sequence: ELQTTIHDIILECVY
Position: 25-39
Source molecule (GenBank): AAD33252.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: E6 (145-158)
Chemical type: Peptide from protein
Sequence: SCCRSSRTRRETQL
Position: 145-158
Source molecule (GenBank): AAD33252.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: E6 (7-21)
Chemical type: Peptide from protein
Sequence: PTRRPYKLPDLCTEL
Position: 7-21
Source molecule (GenBank): P06463.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: E7 (19-33)
Chemical type: Peptide from protein
Sequence: TTDLYCYEQLNDSSE
Position: 19-33
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: E7 (61-75)
Chemical type: Peptide from protein
Sequence: CDSTLRLCVQSTHVD
Position: 61-75
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: E7 (73-87)
Chemical type: Peptide from protein
Sequence: HVDIRTLEDLLMGTL
Position: 73-87
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: E7 (79-93)
Chemical type: Peptide from protein
Sequence: LEDLLMGTLGIVCPI
Position: 79-93
Source molecule (GenBank): AAD33253.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Ji Hyung Kim; Yu Hu; Tang Yongqing; Jessica Kim; Victoria A Hughes; Jérôme Le Nours; Elsa A Marquez; Anthony W Purcell; Qi Wan; Masahiko Sugita; Jamie Rossjohn; Florian Winau. "CD1a on Langerhans cells controls inflammatory skin disease." Nature immunology (2016).

Epitope: wax ester
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host:  8-12 weeks
Cell type: T cell CD4+
Tissue: lymph node
Culture conditions: Direct Ex Vivo
Reference: Jérôme Le Nours; T Praveena; Daniel G Pellicci; Nicholas A Gherardin; Fiona J Ross; Ricky T Lim; Gurdyal S Besra; Santosh Keshipeddy; Stewart K Richardson; Amy R Howell; Stephanie Gras; Dale I Godfrey; Jamie Rossjohn; Adam P Uldrich. "Atypical natural killer T-cell receptor recognition of CD1d-lipid antigens." Nature communications (2016).

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 60.0

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 1000000.0

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 60000.0

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Quantitative measurement: 4100.0

Epitope: 4'-deoxy-α-GalCer
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: NKT cells
Tissue: blood
Culture conditions: Non-antigen specific activation

Epitope: OCH
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: OCH
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: ß-GlcCer (C24:1)
Chemical type: Glycolipid
Assay category: TCell
Result: Positive
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Neville K Kisalu; Azza H Idris; Connor Weidle; Yevel Flores-Garcia; Barbara J Flynn; Brandon K Sack; Sean Murphy; Arne Schön; Ernesto Freire; Joseph R Francica; Alex B Miller; Jason Gregory; Sandra March; Hua-Xin Liao; Barton F Haynes; Kevin Wiehe; Ashley M Trama; Kevin O Saunders; Morgan A Gladden; Anthony Monroe; Mattia Bonsignori; Masaru Kanekiyo; Adam K Wheatley; Adrian B McDermott; S Katie Farney; Gwo-Yu Chuang; Baoshan Zhang; Natasha Kc; Sumana Chakravarty; Peter D Kwong; Photini Sinnis; Sangeeta N Bhatia; Stefan H I Kappe; B Kim Lee Sim; Stephen L Hoffman; Fidel Zavala; Marie Pancera; Robert A Seder. "A human monoclonal antibody prevents malaria infection by targeting a new site of vulnerability on the parasite." Nature medicine (2018).

Epitope: PfCSP peptide 22
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive

Epitope: PfCSP peptide 22
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive

Epitope: PfCSP peptide 22
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive

Epitope: PfCSP peptide 22
Chemical type: Peptide from protein
Sequence: NANPNVDPNANPNVD
Position: 124-138
Source molecule (GenBank): P02893.1
Assay category: BCell
Result: Positive-Low

Epitope: PfCSP peptide 21 variant
Chemical type: Peptide, no natural source
Sequence: NADPNANPNVDPNAN
Assay category: BCell
Result: Positive

Epitope: PfCSP peptide 21 variant
Chemical type: Peptide, no natural source
Sequence: NPDPNANPNADPNAN
Assay category: BCell
Result: Positive

Epitope: PfCSP peptide 21 variant
Chemical type: Peptide, no natural source
Sequence: NPDPNANPNVDPAAN
Assay category: BCell
Result: Positive

Epitope: PfCSP peptide 21 variant
Chemical type: Peptide, no natural source
Sequence: NPDPNGNPNVDPNAN
Assay category: BCell
Result: Positive
Epitope: huAP33
Chemical type: Discontinuous protein residues
Discontinuous residues: L413, N415, G418, W420
Source molecule (GenBank): NP_671491.1
Assay category: BCell
Result: Positive
Reference: Michael J Ricciardi; Diogo M Magnani; Alba Grifoni; Young-Chan Kwon; Martin J Gutman; Nathan D Grubaugh; Karthik Gangavarapu; Mark Sharkey; Cassia G T Silveira; Varian K Bailey; Núria Pedreño-Lopez; Lucas Gonzalez-Nieto; Helen S Maxwell; Aline Domingues; Mauricio A Martins; John Pham; Daniela Weiskopf; John Altman; Esper G Kallas; Kristian G Andersen; Mario Stevenson; Paola Lichtenberger; Hyeryun Choe; Stephen S Whitehead; Alessandro Sette; David I Watkins. "Ontogeny of the B- and T-cell response in a primary Zika virus infection of a dengue-naïve individual during the 2016 outbreak in Miami, FL." PLoS neglected tropical diseases (2017).

Epitope: ZIKA polyprotein 456-470
Chemical type: Peptide from protein
Sequence: KVEITPNSPRAEATL
Position: 456-470
Source molecule (GenBank): APO08504.1
Assay category: TCell
Result: Negative
Host: F 32 or 34 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Scott M Jackson; Ioannis Manolaridis; Julia Kowal; Melanie Zechner; Nicholas M I Taylor; Manuel Bause; Stefanie Bauer; Ruben Bartholomaeus; Guenther Bernhardt; Burkhard Koenig; Armin Buschauer; Henning Stahlberg; Karl-Heinz Altmann; Kaspar P Locher. "Structural basis of small-molecule inhibition of human multidrug transporter ABCG2." Nature structural & molecular biology (2018).

Epitope: Epitope of 5D3 Fab on ABCG2 transporter
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N590, P593, G594, L595, N596; B: G599, N600, N601, C603, N604, Y605, E611, E612, V615, K616, D620, L621, S622
Source molecule (GenBank): Q9UNQ0.3
Assay category: BCell
Result: Positive

Epitope: Epitope of 5D3 Fab on ABCG2 transporter
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N590, P593, G594, L595, N596; B: G599, N600, N601, C603, N604, Y605, E611, E612, V615, K616, D620, L621, S622
Source molecule (GenBank): Q9UNQ0.3
Assay category: BCell
Result: Positive

Epitope: Epitope of 5D3 Fab on ABCG2 transporter
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N590, P593, G594, L595, N596; B: G599, N600, N601, C603, N604, Y605, E611, E612, V615, K616, D620, L621, S622
Source molecule (GenBank): Q9UNQ0.3
Assay category: BCell
Result: Negative

Epitope: Epitope of 5D3 Fab on ABCG2 transporter
Chemical type: Region on multi-chain protein
Discontinuous residues: A: N590, P593, G594, L595, N596; B: G599, N600, N601, C603, N604, Y605, E611, E612, V615, K616, D620, L621, S622
Source molecule (GenBank): Q9UNQ0.3
Assay category: BCell
Result: Positive
Reference: Naoki Miyamoto; Miho Yoshimura; Yuji Okubo; Kayo Suzuki-Nagata; Takeshi Tsumuraya; Nobutoshi Ito; Ikuo Fujii. "Structural basis of the broad substrate tolerance of the antibody 7B9-catalyzed hydrolysis of p-nitrobenzyl esters." Bioorganic & medicinal chemistry (2018).

Epitope: Catalytic 7B9 Fab epitope on TSA2
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 1.9

Epitope: Catalytic 7B9 Fab epitope on TSA2
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 2.2

Epitope: Catalytic 7B9 Fab epitope on TSA2
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Reference: Andreas Recke; Ann-Katrin Regensburger; Florian Weigold; Antje Müller; Harald Heidecke; Gabriele Marschner; Christoph M Hammers; Ralf J Ludwig; Gabriela Riemekasten. "Autoantibodies in Serum of Systemic Scleroderma Patients: Peptide-Based Epitope Mapping Indicates Increased Binding to Cytoplasmic Domains of CXCR3." Frontiers in immunology (2018).

Epitope: CXCR3 peptide 23
Chemical type: Peptide from protein
Sequence: VAGFLLPLLVMAYCYAHILA
Position: 221-240
Source molecule (GenBank): P49682.2
Assay category: BCell
Result: Negative
Host:  38-76 years

Epitope: CXCR3 peptide 23
Chemical type: Peptide from protein
Sequence: VAGFLLPLLVMAYCYAHILA
Position: 221-240
Source molecule (GenBank): P49682.2
Assay category: BCell
Result: Negative
Host:  20-60 years

Epitope: CXCR3 peptide 28
Chemical type: Peptide from protein
Sequence: YHLVVLVDILMDLGALARNC
Position: 271-290
Source molecule (GenBank): P49682.2
Assay category: BCell
Result: Negative
Host:  38-76 years

Epitope: CXCR3 peptide 28
Chemical type: Peptide from protein
Sequence: YHLVVLVDILMDLGALARNC
Position: 271-290
Source molecule (GenBank): P49682.2
Assay category: BCell
Result: Negative
Host:  20-60 years
Reference: Flor Evangelista; Aleeza J Roth; Phillip Prisayanh; Brenda R Temple; Ning Li; Ye Qian; Donna A Culton; Zhi Liu; Oliver J Harrison; Julia Brasch; Barry Honig; Lawrence Shapiro; Luis A Diaz. "Pathogenic IgG4 autoantibodies from endemic pemphigus foliaceus recognize a desmoglein-1 conformational epitope." Journal of autoimmunity (2018).

Epitope: Dsg1 EC1 73-86
Chemical type: Peptide from protein
Sequence: IHSDCAANQQVTYR
Position: 73-86
Source molecule (GenBank): Q02413.2
Assay category: BCell
Result: Negative

Epitope: Dsg1 EC1 73-86
Chemical type: Peptide from protein
Sequence: IHSDCAANQQVTYR
Position: 73-86
Source molecule (GenBank): Q02413.2
Assay category: BCell
Result: Positive