LiteFold/IEDB huggingface dataset:
Reference: Romain Darrigrand; Alison Pierson; Marine Rouillon; Dolor Renko; Mathilde Boulpicante; David Bouyssié; Emmanuelle Mouton-Barbosa; Julien Marcoux; Camille Garcia; Michael Ghosh; Mouad Alami; Sébastien Apcher. "Isoginkgetin derivative IP2 enhances the adaptive immune response against tumor antigens." Communications biology (2021).

Epitope: AALDFKNV
Chemical type: Peptide from protein
Sequence: AALDFKNV
Position: 1221-1228
Source molecule (GenBank): Q8CG47.1
Assay category: MhcLigandElution
Result: Positive

Epitope: AALENTHLL
Chemical type: Peptide from protein
Sequence: AALENTHLL
Position: 144-152
Source molecule (GenBank): Q9D187.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DVANKIGII
Chemical type: Peptide from protein
Sequence: DVANKIGII
Position: 148-156
Source molecule (GenBank): P62751.1
Assay category: MhcLigandElution
Result: Positive

Epitope: DVQITQSPS
Chemical type: Peptide from protein
Sequence: DVQITQSPS
Position: 21-29
Source molecule (GenBank): A0A0B4J1I1.1
Assay category: MhcLigandElution
Result: Positive

Epitope: GYEPPVQESV
Chemical type: Peptide from protein
Sequence: GYEPPVQESV
Position: 255-264
Source molecule (GenBank): P97351.3
Assay category: MhcLigandElution
Result: Positive

Epitope: GYEPPVQESV
Chemical type: Peptide from protein
Sequence: GYEPPVQESV
Position: 255-264
Source molecule (GenBank): P97351.3
Assay category: MhcLigandElution
Result: Positive

Epitope: KVLPGVDALSNV
Chemical type: Peptide from protein
Sequence: KVLPGVDALSNV
Position: 406-417
Source molecule (GenBank): P09411.4
Assay category: MhcLigandElution
Result: Positive

Epitope: SGIINFIHF
Chemical type: Peptide from protein
Sequence: SGIINFIHF
Position: 122-130
Source molecule (GenBank): Q99P69.2
Assay category: MhcLigandElution
Result: Positive

Epitope: TALENLSTL
Chemical type: Peptide from protein
Sequence: TALENLSTL
Position: 1225-1233
Source molecule (GenBank): P19096.2
Assay category: MhcLigandElution
Result: Positive

Epitope: TNISFTNM
Chemical type: Peptide from protein
Sequence: TNISFTNM
Position: 96-103
Source molecule (GenBank): Q9CYY7.2
Assay category: MhcLigandElution
Result: Positive

Epitope: TNQDFIQRL
Chemical type: Peptide from protein
Sequence: TNQDFIQRL
Position: 600-608
Source molecule (GenBank): Q80TM9.2
Assay category: MhcLigandElution
Result: Positive

Epitope: VFYAVKVL
Chemical type: Peptide from protein
Sequence: VFYAVKVL
Position: 122-129
Source molecule (GenBank): Q9WVC6.1
Assay category: MhcLigandElution
Result: Positive

Epitope: VGIENIHVM
Chemical type: Peptide from protein
Sequence: VGIENIHVM
Position: 269-277
Source molecule (GenBank): Q8VE11.1
Assay category: MhcLigandElution
Result: Positive

Epitope: VNNEFEKL
Chemical type: Peptide from protein
Sequence: VNNEFEKL
Position: 195-202
Source molecule (GenBank): B9EJ54.1
Assay category: MhcLigandElution
Result: Positive
Reference: Barbara Uzonyi; Zsóka Szabó; Eszter Trojnár; Satu Hyvärinen; Katalin Uray; Helle H Nielsen; Anna Erdei; T Sakari Jokiranta; Zoltán Prohászka; Zsolt Illes; Mihály Józsi. "Autoantibodies Against the Complement Regulator Factor H in the Serum of Patients With Neuromyelitis Optica Spectrum Disorder." Frontiers in immunology (2021).

Epitope: FH 1152-1166
Chemical type: Peptide from protein
Sequence: CRNGQWSEPPKCLHP
Position: 1152-1166
Source molecule (GenBank): P08603.4
Assay category: BCell
Result: Negative
Host: F 23-64 years

Epitope: FH 1184-1198
Chemical type: Peptide from protein
Sequence: TAKQKLYSRTGESVE
Position: 1184-1198
Source molecule (GenBank): P08603.4
Assay category: BCell
Result: Negative
Host: F 23-64 years

Epitope: FH 1192-1206
Chemical type: Peptide from protein
Sequence: RTGESVEFVCKRGYR
Position: 1192-1206
Source molecule (GenBank): P08603.4
Assay category: BCell
Result: Negative
Host: F 23-64 years

Epitope: FHR-1 281-295
Chemical type: Peptide from protein
Sequence: RWTAKQKLYLRTGES
Position: 281-295
Source molecule (GenBank): NP_002104.2
Assay category: BCell
Result: Negative
Host: F 23-64 years

Epitope: FH 19-20 Autoantibodies Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: R1182, W1183, K1186, K1188, E1198, R1210
Source molecule (GenBank): P08603.4
Assay category: BCell
Result: Positive
Host: F 23-64 years
Reference: Alex W Wessel; Michael P Doyle; Taylor B Engdahl; Jessica Rodriguez; James E Crowe; Michael S Diamond. "Human Monoclonal Antibodies against NS1 Protein Protect against Lethal West Nile Virus Infection." mBio (2021).

Epitope: WNV-120
Chemical type: Discontinuous protein residues
Discontinuous residues: K835, N873
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-120
Chemical type: Discontinuous protein residues
Discontinuous residues: K835, N873
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-120
Chemical type: Discontinuous protein residues
Discontinuous residues: K835, N873
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-103-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: K932
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-103-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: K932
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-103-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: K932
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-113-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D1132, E1133, K1134
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-113-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D1132, E1133, K1134
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive

Epitope: WNV-113-Epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: D1132, E1133, K1134
Source molecule (GenBank): AAF20092.2
Assay category: BCell
Result: Positive
Reference: Swati Sharma; Srishti Vashisht; S N Gaur; Shakuntala Lavasa; Naveen Arora. "Identification of B cell epitopes of Per a 5 allergen using bioinformatic approach." Immunobiology (2021).

Epitope: BC-P5
Chemical type: Peptide from protein
Sequence: MGFDVSKYSNVAKWFE
Position: 171-186
Source molecule (GenBank): AAX33729.1
Assay category: BCell
Result: Positive
Host:  15-42 years

Epitope: BC-P5
Chemical type: Peptide from protein
Sequence: MGFDVSKYSNVAKWFE
Position: 171-186
Source molecule (GenBank): AAX33729.1
Assay category: BCell
Result: Positive
Host:  19-31 years

Epitope: BC-P5
Chemical type: Peptide from protein
Sequence: MGFDVSKYSNVAKWFE
Position: 171-186
Source molecule (GenBank): AAX33729.1
Assay category: BCell
Result: Negative

Epitope: BC-P5
Chemical type: Peptide from protein
Sequence: MGFDVSKYSNVAKWFE
Position: 171-186
Source molecule (GenBank): AAX33729.1
Assay category: BCell
Result: Negative
Reference: Ke Pan; Yulun Chiu; Eric Huang; Michelle Chen; Junmei Wang; Ivy Lai; Shailbala Singh; Rebecca M Shaw; Michael J MacCoss; Cassian Yee. "Mass spectrometric identification of immunogenic SARS-CoV-2 epitopes and cognate TCRs." Proceedings of the National Academy of Sciences of the United States of America (2021).

Epitope: SP-983
Chemical type: Peptide from protein
Sequence: RLDKVEAEV
Position: 983-991
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SP-983
Chemical type: Peptide from protein
Sequence: RLDKVEAEV
Position: 983-991
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Li Zhang; Lei Cao; Xing-Su Gao; Bin-Yang Zheng; Yong-Qiang Deng; Jing-Xin Li; Rui Feng; Qian Bian; Xi-Ling Guo; Nan Wang; Hong-Ying Qiu; Lei Wang; Zhen Cui; Qing Ye; Geng Chen; Kui-Kui Lu; Yin Chen; Yu-Tao Chen; Hong-Xing Pan; Jiaping Yu; Wenrong Yao; Bao-Li Zhu; Jianping Chen; Yong Liu; Cheng-Feng Qin; Xiangxi Wang; Feng-Cai Zhu. "A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2." National science review (2021).

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.466

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.000254

Epitope: Epitope of FC05 Fab on SARS-CoV-2 S
Chemical type: Discontinuous protein residues
Discontinuous residues: Y144, Y145, H146, K147, K150, W152, R246, S247, Y248, L249
Source molecule (GenBank): P0DTC2.1
Assay category: BCell
Result: Positive
Quantitative measurement: 545000.0
Reference: Sílvia da Silva Fontes; Fernanda de Moraes Maia; Laura Santa'Anna Ataides; Fernando Paiva Conte; Josué da Costa Lima-Junior; Tatiana Rozental; Matheus Ribeiro da Silva Assis; Adonai Alvino Pessoa Júnior; Jorlan Fernandes; Elba Regina Sampaio de Lemos; Rodrigo Nunes Rodrigues-da-Silva. "Identification of Immunogenic Linear B-Cell Epitopes in  Outer Membrane Proteins Using Immunoinformatics Approaches Reveals Potential Targets of Persistent Infections." Pathogens (Basel, Switzerland) (2021).

Epitope: OMP-H 51-59
Chemical type: Peptide from protein
Sequence: QFSPQREKM
Position: 51-59
Source molecule (GenBank): WP_042525978.1
Assay category: BCell
Result: Positive
Host:  21-53 years
Reference: Zhiwei Wang; Ling Ran; Chunxia Chen; Ranran Shi; Yu Dong; Yubing Li; Xiuman Zhou; Yuanming Qi; Pingping Zhu; Yanfeng Gao; Yahong Wu. "Identification of HLA-A2-Restricted Mutant Epitopes from Neoantigens of Esophageal Squamous Cell Carcinoma." Vaccines (2021).

Epitope: MUC17 A2414V
Chemical type: Peptide, no natural source
Sequence: TMPVVSSEV
Assay category: MhcBinding
Result: Positive-High

Epitope: NEB D3282V
Chemical type: Peptide, no natural source
Sequence: VISDYKYKV
Assay category: MhcBinding
Result: Positive-Low

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Negative
Host:  8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: TCell
Result: Positive
Host:  8 weeks
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Short Term Restimulated

Epitope: NFE2L2 D13N
Chemical type: Peptide, no natural source
Sequence: ILWRQDINL
Assay category: MhcBinding
Result: Positive-High
Reference: Hakimeh Ebrahimi-Nik; Marmar Moussa; Ryan P Englander; Summit Singhaviranon; Justine Michaux; HuiSong Pak; Hiroko Miyadera; William L Corwin; Grant L J Keller; Adam T Hagymasi; Tatiana V Shcheglova; George Coukos; Brian M Baker; Ion I Mandoiu; Michal Bassani-Sternberg; Pramod K Srivastava. "Reversion analysis reveals the in vivo immunogenicity of a poorly MHC I-binding cancer neoepitope." Nature communications (2021).

Epitope: Ccdc85c MUT (10mer)
Chemical type: Peptide, no natural source
Sequence: TYIRPFETKV
Assay category: TCell
Result: Negative
Host: F 6-8 weeks

Epitope: Ccdc85c MUT (10mer)
Chemical type: Peptide, no natural source
Sequence: TYIRPFETKV
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 247.0

Epitope: W1
Chemical type: Peptide, no natural source
Sequence: GTYIRPLETKVK
Assay category: MhcBinding
Result: Negative

Epitope: W1
Chemical type: Peptide, no natural source
Sequence: GTYIRPLETKVK
Assay category: MhcBinding
Result: Negative
Reference: Kjersti Flatmark; Annette Torgunrud; Karianne G Fleten; Ben Davidson; Hedvig V Juul; Nadia Mensali; Christin Lund-Andersen; Else Marit Inderberg. "Peptide vaccine targeting mutated : a potential novel treatment for pseudomyxoma peritonei." Journal for immunotherapy of cancer (2021).

Epitope: GNAS_R201H
Chemical type: Peptide, no natural source
Sequence: KQADYVPSDQDLLRCHVLTS
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GNAS_R201H
Chemical type: Peptide, no natural source
Sequence: KQADYVPSDQDLLRCHVLTS
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GNAS_R201H
Chemical type: Peptide, no natural source
Sequence: KQADYVPSDQDLLRCHVLTS
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GNAS_R201C
Chemical type: Peptide, no natural source
Sequence: KQADYVPSDQDLLRCCVLTS
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GNAS_R201C
Chemical type: Peptide, no natural source
Sequence: KQADYVPSDQDLLRCCVLTS
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GNAS_R201C
Chemical type: Peptide, no natural source
Sequence: KQADYVPSDQDLLRCCVLTS
Assay category: TCell
Result: Positive-Low
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Xiaoxiao Jin; Xiaotao Liu; Zining Zhou; Yan Ding; Yandan Wu; Jie Qiu; Chuanlai Shen. "Identification of HLA-A2 restricted epitopes of glypican-3 and induction of CTL responses in HLA-A2 transgenic mice." Cancer immunology, immunotherapy : CII (2022).

Epitope: P5
Chemical type: Peptide from protein
Sequence: FLIIQNAAV
Position: 102-110
Source molecule (GenBank): P51654.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P7
Chemical type: Peptide from protein
Sequence: SLTPQAFEFV
Position: 136-145
Source molecule (GenBank): P51654.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P19
Chemical type: Peptide from protein
Sequence: STIHDSIQYV
Position: 325-334
Source molecule (GenBank): P51654.1
Assay category: TCell
Result: Negative
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Eva Bräunlein; Gaia Lupoli; Franziska Füchsl; Esam T Abualrous; Niklas de Andrade Krätzig; Dario Gosmann; Lukas Wietbrock; Sebastian Lange; Thomas Engleitner; Huan Lan; Stefan Audehm; Manuel Effenberger; Melanie Boxberg; Katja Steiger; Yinshui Chang; Kai Yu; Cigdem Atay; Florian Bassermann; Wilko Weichert; Dirk H Busch; Roland Rad; Christian Freund; Iris Antes; Angela M Krackhardt. "Functional analysis of peripheral and intratumoral neoantigen-specific TCRs identified in a patient with melanoma." Journal for immunotherapy of cancer (2021).

Epitope: TENM1
Chemical type: Peptide, no natural source
Sequence: TTYSPIGEK
Assay category: TCell
Result: Negative
Host:  56 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: TENM1
Chemical type: Peptide, no natural source
Sequence: TTYSPIGEK
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 81.51

Epitope: ITLN1
Chemical type: Peptide, no natural source
Sequence: WRNSFLLRY
Assay category: TCell
Result: Negative
Host:  56 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: ITLN1
Chemical type: Peptide, no natural source
Sequence: WRNSFLLRY
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 29.0

Epitope: SYTL4 WT
Chemical type: Peptide from protein
Sequence: GRIAFSLKY
Position: 358-366
Source molecule (GenBank): Q96C24.2
Assay category: TCell
Result: Negative
Host:  56 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: SYTL4 WT
Chemical type: Peptide from protein
Sequence: GRIAFSLKY
Position: 358-366
Source molecule (GenBank): Q96C24.2
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 97.32

Epitope: NCAPG2 WT
Chemical type: Peptide from protein
Sequence: KPILWRGLK
Position: 332-340
Source molecule (GenBank): Q86XI2.1
Assay category: TCell
Result: Negative
Host:  56 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: NCAPG2 WT
Chemical type: Peptide from protein
Sequence: KPILWRGLK
Position: 332-340
Source molecule (GenBank): Q86XI2.1
Assay category: MhcBinding
Result: Positive-Low
Quantitative measurement: 4488.7
Reference: Marco Pirazzini; Alessandro Grinzato; Davide Corti; Sonia Barbieri; Oneda Leka; Francesca Vallese; Marika Tonellato; Chiara Silacci-Fregni; Luca Piccoli; Eaazhisai Kandiah; Giampietro Schiavo; Giuseppe Zanotti; Antonio Lanzavecchia; Cesare Montecucco. "Exceptionally potent human monoclonal antibodies are effective for prophylaxis and treatment of tetanus in mice." The Journal of clinical investigation (2021).

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0060

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0000030

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive
Quantitative measurement: 450000.0

Epitope: Epitope of mAb TT-104 Fab on TeNT HC
Chemical type: Discontinuous protein residues
Discontinuous residues: Q1141, L1142, K1143, I1145, Y1150, T1152, N1153, A1154, P1155, S1156, Y1157, T1158, R1168, L1173, Y1202, P1279, R1281
Source molecule (GenBank): WP_129028331.1
Assay category: BCell
Result: Positive
Reference: Leo Swadling; Mariana O Diniz; Nathalie M Schmidt; Oliver E Amin; Aneesh Chandran; Emily Shaw; Corinna Pade; Joseph M Gibbons; Nina Le Bert; Anthony T Tan; Anna Jeffery-Smith; Cedric C S Tan; Christine Y L Tham; Stephanie Kucykowicz; Gloryanne Aidoo-Micah; Joshua Rosenheim; Jessica Davies; Marina Johnson; Melanie P Jensen; George Joy; Laura E McCoy; Ana M Valdes; Benjamin M Chain; David Goldblatt; Daniel M Altmann; Rosemary J Boyton; Charlotte Manisty; Thomas A Treibel; James C Moon; Lucy van Dorp; Francois Balloux; Áine McKnight; Mahdad Noursadeghi; Antonio Bertoletti; Mala K Maini. "Pre-existing polymerase-specific T cells expand in abortive seronegative SARS-CoV-2." Nature (2022).

Epitope: NSP12-76
Chemical type: Peptide from protein
Sequence: ADPAMHAASGNLLLD
Position: 4768-4782
Source molecule (GenBank): QHD43415.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Jeehyun Lee; Youri Lee; Laura Klenow; Elizabeth M Coyle; Juanjie Tang; Supriya Ravichandran; Hana Golding; Surender Khurana. "Protective antigenic sites identified in respiratory syncytial virus fusion protein reveals importance of p27 domain." EMBO molecular medicine (2022).

Epitope: F 552-572
Chemical type: Peptide from protein
Sequence: ARSTPVTLSKDQLSGINNIAF
Position: 552-572
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive-Low
Host: F 4-6 weeks

Epitope: F 552-572
Chemical type: Peptide from protein
Sequence: ARSTPVTLSKDQLSGINNIAF
Position: 552-572
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Positive
Host: F 4-6 weeks

Epitope: F 552-572
Chemical type: Peptide from protein
Sequence: ARSTPVTLSKDQLSGINNIAF
Position: 552-572
Source molecule (GenBank): P03420.1
Assay category: BCell
Result: Negative
Host: F 4-6 weeks