Reference: Yuan Chen; Georgina H Mason; D Oliver Scourfield; Alexander Greenshields-Watson; Tracey A Haigh; Andrew K Sewell; Heather M Long; Awen M Gallimore; Pierre Rizkallah; Bruce J MacLachlan; Andrew Godkin. "Structural definition of HLA class II-presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4<sup>+</sup> T cell immunity." Cell reports (2023).

Epitope: SARS-CoV-2 nsp6 3801-3815
Chemical type: Peptide from protein
Sequence: NRYFRLTLGVYDYLV
Position: 3801-3815
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Positive-Low
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 nsp6 3801-3815
Chemical type: Peptide from protein
Sequence: NRYFRLTLGVYDYLV
Position: 3801-3815
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Negative
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 nsp6 3801-3815
Chemical type: Peptide from protein
Sequence: NRYFRLTLGVYDYLV
Position: 3801-3815
Source molecule (GenBank): P0DTD1.1
Assay category: TCell
Result: Negative
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 nsp6 3801-3815
Chemical type: Peptide from protein
Sequence: NRYFRLTLGVYDYLV
Position: 3801-3815
Source molecule (GenBank): P0DTD1.1
Assay category: MhcBinding
Result: Positive-Intermediate
Quantitative measurement: 1516.3

Epitope: SARS-CoV-2 ORF6 13-27
Chemical type: Peptide from protein
Sequence: EILLIIMRTFKVSIW
Position: 13-27
Source molecule (GenBank): P0DTC6.1
Assay category: TCell
Result: Positive-Low
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF6 13-27
Chemical type: Peptide from protein
Sequence: EILLIIMRTFKVSIW
Position: 13-27
Source molecule (GenBank): P0DTC6.1
Assay category: TCell
Result: Negative
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF6 13-27
Chemical type: Peptide from protein
Sequence: EILLIIMRTFKVSIW
Position: 13-27
Source molecule (GenBank): P0DTC6.1
Assay category: TCell
Result: Positive-Low
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF6 13-27
Chemical type: Peptide from protein
Sequence: EILLIIMRTFKVSIW
Position: 13-27
Source molecule (GenBank): P0DTC6.1
Assay category: MhcBinding
Result: Negative

Epitope: SARS-CoV-2 ORF8 43-57
Chemical type: Peptide from protein
Sequence: SKWYIRVGARKSAPL
Position: 43-57
Source molecule (GenBank): P0DTC8.1
Assay category: TCell
Result: Positive-Intermediate
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF8 43-57
Chemical type: Peptide from protein
Sequence: SKWYIRVGARKSAPL
Position: 43-57
Source molecule (GenBank): P0DTC8.1
Assay category: TCell
Result: Positive-Low
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF8 43-57
Chemical type: Peptide from protein
Sequence: SKWYIRVGARKSAPL
Position: 43-57
Source molecule (GenBank): P0DTC8.1
Assay category: TCell
Result: Positive-High
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF8 43-57
Chemical type: Peptide from protein
Sequence: SKWYIRVGARKSAPL
Position: 43-57
Source molecule (GenBank): P0DTC8.1
Assay category: TCell
Result: Positive-High
Host:  31-59 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV-2 ORF8 43-57
Chemical type: Peptide from protein
Sequence: SKWYIRVGARKSAPL
Position: 43-57
Source molecule (GenBank): P0DTC8.1
Assay category: MhcBinding
Result: Positive-High
Quantitative measurement: 430.2