LiteFold/IEDB huggingface dataset:
Reference: Lili Li; Meiling Gao; Jie Li; Shulong Zu; Yanan Wang; Chunfeng Chen; Dingyi Wan; Jing Duan; Roghiyh Aliyari; Jingfeng Wang; Jicai Zhang; Yujie Jin; Weijin Huang; Xiaoxia Jin; Minxin Shi; Youchun Wang; Cheng-Feng Qin; Heng Yang; Genhong Cheng. "Methods to Identify Immunogenic Peptides in SARS-CoV-2 Spike and Protective Monoclonal Antibodies in COVID-19 Patients." Small methods (2021).

Epitope: SARS-CoV 2 Spike 1-16
Chemical type: Peptide from protein
Sequence: MFVFLVLLPLVSSQCV
Position: 1-16
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative
Host: F 53 years

Epitope: SARS-CoV 2 Spike 1-16
Chemical type: Peptide from protein
Sequence: MFVFLVLLPLVSSQCV
Position: 1-16
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV 2 Spike 142-166
Chemical type: Peptide from protein
Sequence: GVYYHKNNKSWMESEFRVYSSANNC
Position: 142-166
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative
Host: F 53 years

Epitope: SARS-CoV 2 Spike 142-166
Chemical type: Peptide from protein
Sequence: GVYYHKNNKSWMESEFRVYSSANNC
Position: 142-166
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV 2 Spike 167-191
Chemical type: Peptide from protein
Sequence: TFEYVSQPFLMDLEGKQGNFKNLRE
Position: 167-191
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative
Host: F 53 years

Epitope: SARS-CoV 2 Spike 167-191
Chemical type: Peptide from protein
Sequence: TFEYVSQPFLMDLEGKQGNFKNLRE
Position: 167-191
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV 2 Spike 642-666
Chemical type: Peptide from protein
Sequence: VFQTRAGCLIGAEHVNNSYECDIPI
Position: 642-666
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative
Host: F 53 years

Epitope: SARS-CoV 2 Spike 642-666
Chemical type: Peptide from protein
Sequence: VFQTRAGCLIGAEHVNNSYECDIPI
Position: 642-666
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: SARS-CoV 2 Spike 1117-1141
Chemical type: Peptide from protein
Sequence: TDNTFVSGNCDVVIGIVNNTVYDPL
Position: 1117-1141
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative
Host: F 53 years

Epitope: SARS-CoV 2 Spike 1117-1141
Chemical type: Peptide from protein
Sequence: TDNTFVSGNCDVVIGIVNNTVYDPL
Position: 1117-1141
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative
Reference: W Ivan Morrison; Adriana Aguado; Tara A Sheldrake; Nicholas C Palmateer; Olukemi O Ifeonu; Kyle Tretina; Keith Parsons; Emilio Fenoy; Timothy Connelley; Morten Nielsen; Joana C Silva. "CD4 T Cell Responses to  in Immune Cattle Recognize a Diverse Set of Parasite Antigens Presented on the Surface of Infected Lymphoblasts." Journal of immunology (Baltimore, Md. : 1950) (2021).

Epitope: Tp14-55-67
Chemical type: Peptide from protein
Sequence: KYFAIDIDGTFFIKD
Position: 55-69
Source molecule (GenBank): EAN34312.1
Assay category: TCell
Result: Positive
Host: M 12-24 months
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: Tp20-451-468
Chemical type: Peptide from protein
Sequence: FNKFDMLHDGVYYSSPVP
Position: 451-468
Source molecule (GenBank): EAN30703.1
Assay category: TCell
Result: Positive
Host: M 12-24 months
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Sean Hammond; Andrew Gibson; Kanoot Jaruthamsophon; Sharin Roth; Merrie Mosedale; Dean J Naisbitt. "Shedding Light on Drug-Induced Liver Injury: Activation of T Cells From Drug Naive Human Donors With Tolvaptan and a Hydroxybutyric Acid Metabolite." Toxicological sciences : an official journal of the Society of Toxicology (2021).

Epitope: Abacavir
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Jirawat Pratoomwun; Paul Thomson; Kanoot Jaruthamsophon; Rawiporn Tiyasirichokchai; Pimonpan Jinda; Ticha Rerkpattanapipat; Wichittra Tassaneeyakul; Nontaya Nakkam; Pawinee Rerknimitr; Jettanong Klaewsongkram; Yuttana Srinoulprasert; Munir Pirmohamed; Dean J Naisbitt; Chonlaphat Sukasem. "Characterization of T-Cell Responses to SMX and SMX-NO in Co-Trimoxazole Hypersensitivity Patients Expressing ." Frontiers in immunology (2021).

Epitope: sulfamethoxazole
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host: M 27 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: sulfamethoxazole
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive-High
Host: M 27 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: sulfamethoxazole
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host: M 27 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: sulfamethoxazole
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host:  25-44 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: sulfamethoxazole
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Host:  25-44 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Supriya Ravichandran; Juanjie Tang; Gabrielle Grubbs; Youri Lee; Sara Pourhashemi; Laila Hussaini; Stacey A Lapp; Robert C Jerris; Vidisha Singh; Ann Chahroudi; Evan J Anderson; Christina A Rostad; Surender Khurana. "SARS-CoV-2 immune repertoire in MIS-C and pediatric COVID-19." Nature immunology (2021).

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Host:  <16 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Host:  <21 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Host:  <21 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Host:  <21 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Positive
Host:  <21 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Negative
Host:  <16 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Negative
Host:  <21 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Negative
Host:  <21 years

Epitope: CoV-2 NSP12 5082-5127
Chemical type: Peptide from protein
Sequence: ANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNR
Position: 5082-5127
Source molecule (GenBank): P0DTD1.1
Assay category: BCell
Result: Negative
Host:  <16 years
Reference: Min Jiang; Gaiping Zhang; Hongliang Liu; Peiyang Ding; Yunchao Liu; Yuanyuan Tian; Yanwei Wang; Aiping Wang. "Epitope Profiling Reveals the Critical Antigenic Determinants in SARS-CoV-2 RBD-Based Antigen." Frontiers in immunology (2021).

Epitope: R300
Chemical type: Peptide from protein
Sequence: KCTLKSFTVEKGIYQTSNFR
Position: 300-319
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: R300
Chemical type: Peptide from protein
Sequence: KCTLKSFTVEKGIYQTSNFR
Position: 300-319
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive-Low

Epitope: R390
Chemical type: Peptide from protein
Sequence: LCFTNVYADSFVIRGDEVRQ
Position: 390-409
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: R390
Chemical type: Peptide from protein
Sequence: LCFTNVYADSFVIRGDEVRQ
Position: 390-409
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: R495
Chemical type: Peptide from protein
Sequence: YGFQPTNGVGYQPYRVVVLS
Position: 495-514
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: R495
Chemical type: Peptide from protein
Sequence: YGFQPTNGVGYQPYRVVVLS
Position: 495-514
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: R615
Chemical type: Peptide from protein
Sequence: VNCTEVPVAIHADQL
Position: 615-629
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive-Low

Epitope: R615
Chemical type: Peptide from protein
Sequence: VNCTEVPVAIHADQL
Position: 615-629
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Negative

Epitope: R345 ME
Chemical type: Peptide from protein
Sequence: VYAWN
Position: 350-354
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: R345 ME
Chemical type: Peptide from protein
Sequence: VYAWN
Position: 350-354
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: R345 ME
Chemical type: Peptide from protein
Sequence: VYAWN
Position: 350-354
Source molecule (GenBank): YP_009724390.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Trupti Vardam-Kaur; Latha B Pathangey; Daniel J McCormick; P Leif Bergsagel; Peter A Cohen; Sandra J Gendler. "Multipeptide stimulated PBMCs generate T<sub>EM</sub>/T<sub>CM</sub> for adoptive cell therapy in multiple myeloma." Oncotarget (2021).

Epitope: SEA1
Chemical type: Peptide from protein
Sequence: SPQLSTGVSFFFLSFHISNLQFNSSLEDPSTD
Position: 253-284
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SEA1
Chemical type: Peptide from protein
Sequence: SPQLSTGVSFFFLSFHISNLQFNSSLEDPSTD
Position: 253-284
Source molecule (GenBank): A0A0C4DGW3.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: XBP(S)1.1
Chemical type: Peptide from protein
Sequence: AAAPNPADGTPKVLLLSGQPASAAGAPAGQ
Position: 5-34
Source molecule (GenBank): B1AHH2.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: XBP(S)1.1
Chemical type: Peptide from protein
Sequence: AAAPNPADGTPKVLLLSGQPASAAGAPAGQ
Position: 5-34
Source molecule (GenBank): B1AHH2.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Marta Gomez-Perosanz; Tara Fiyouzi; Miguel Fernandez-Arquero; John Sidney; Alessandro Sette; Ellis L Reinherz; Esther M Lafuente; Pedro A Reche. "Characterization of Conserved and Promiscuous Human Rhinovirus CD4 T Cell Epitopes." Cells (2021).

Epitope: RVA 23-40
Chemical type: Peptide from protein
Sequence: LNYFNINYFKDAASSGAS
Position: 25-42
Source molecule (GenBank): AEP69139.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: RVC 61-75
Chemical type: Peptide from protein
Sequence: LTNPALMSPSVEACG
Position: 61-75
Source molecule (GenBank): ARE30270.1
Assay category: TCell
Result: Negative
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Isaac Quiros-Fernandez; Mansour Poorebrahim; Elham Fakhr; Angel Cid-Arregui. "Immunogenic T cell epitopes of SARS-CoV-2 are recognized by circulating memory and naïve CD8 T cells of unexposed individuals." EBioMedicine (2021).

Epitope: SARS-CoV2-N-P18
Chemical type: Peptide from protein
Sequence: YLGTGPEAGL
Position: 112-121
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-N-P18
Chemical type: Peptide from protein
Sequence: YLGTGPEAGL
Position: 112-121
Source molecule (GenBank): P0DTC9.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SARS-CoV2-N-P18
Chemical type: Peptide from protein
Sequence: YLGTGPEAGL
Position: 112-121
Source molecule (GenBank): P0DTC9.1
Assay category: MhcBinding
Result: Positive-High
Reference: Yifeng Qin; Kaihang Tu; Qingyuan Teng; Delan Feng; Ye Zhao; Guozhong Zhang. "Identification of Novel T-Cell Epitopes on Infectious Bronchitis Virus N Protein and Development of a Multi-epitope Vaccine." Journal of virology (2021).

Epitope: N(181-200)
Chemical type: Peptide from protein
Sequence: SREGSRGRRSGAEDDLIARA
Position: 181-200
Source molecule (GenBank): ATJ01110.1
Assay category: TCell
Result: Negative
Host:  2 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: N(351-370)
Chemical type: Peptide from protein
Sequence: NSPAPKQQRQKKEKKPKKQE
Position: 351-370
Source molecule (GenBank): ATJ01110.1
Assay category: TCell
Result: Negative
Host:  2 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Kobra Mehdinejadiani; Ali Hashemi; Mojgan Bandehpour; Hoda Rahmani; Mohammad Mehdi Ranjbar; Vahid Yardel; Seyed Amir Jalali; Nariman Mosaffa. "Evaluationof the New Outer Membrane Protein A Epitope-based Vaccines for Mice Model of Acinetobacter baumannii Associated Pneumonia and Sepsis Infection." Iranian journal of allergy, asthma, and immunology (2021).

Epitope: P2-18
Chemical type: Peptide from protein
Sequence: YVLLGAGHYKYDFDGVNR
Position: 122-139
Source molecule (GenBank): ATG88079.1
Assay category: BCell
Result: Positive-Low
Host: F 8-10 weeks

Epitope: P2-18
Chemical type: Peptide from protein
Sequence: YVLLGAGHYKYDFDGVNR
Position: 122-139
Source molecule (GenBank): ATG88079.1
Assay category: BCell
Result: Positive-Low
Host: F 3 weeks

Epitope: P2-18
Chemical type: Peptide from protein
Sequence: YVLLGAGHYKYDFDGVNR
Position: 122-139
Source molecule (GenBank): ATG88079.1
Assay category: TCell
Result: Positive-Low
Host: F 3 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P2-18
Chemical type: Peptide from protein
Sequence: YVLLGAGHYKYDFDGVNR
Position: 122-139
Source molecule (GenBank): ATG88079.1
Assay category: TCell
Result: Negative
Host: F 3 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P5-26
Chemical type: Peptide from protein
Sequence: HLKPAAPVVEVAPVEPTPVAPQPQEL
Position: 197-222
Source molecule (GenBank): ATG88079.1
Assay category: BCell
Result: Positive-Low
Host: F 8-10 weeks

Epitope: P5-26
Chemical type: Peptide from protein
Sequence: HLKPAAPVVEVAPVEPTPVAPQPQEL
Position: 197-222
Source molecule (GenBank): ATG88079.1
Assay category: TCell
Result: Negative
Host: F 3 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: P5-26
Chemical type: Peptide from protein
Sequence: HLKPAAPVVEVAPVEPTPVAPQPQEL
Position: 197-222
Source molecule (GenBank): ATG88079.1
Assay category: TCell
Result: Negative
Host: F 3 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Yu-Sun Lee; So-Hee Hong; Hyo-Jung Park; Ho-Young Lee; Ji-Yeon Hwang; Seo Yeon Kim; Jun Won Park; Kang-Seuk Choi; Je Kyung Seong; Sang-In Park; Sang-Myeong Lee; Kyung-Ah Hwang; Jun-Won Yun; Jae-Hwan Nam. "Peptides Derived From S and N Proteins of Severe Acute Respiratory Syndrome Coronavirus 2 Induce T Cell Responses: A Proof of Concept for T Cell Vaccines." Frontiers in microbiology (2021).

Epitope: ST1-S-1132–1161
Chemical type: Peptide from protein
Sequence: KCYGVSPTKL
Position: 378-387
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Negative
Host: F 6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ST6-S-1924-1968
Chemical type: Peptide from protein
Sequence: VFQTRAGCLIGAEHV
Position: 642-656
Source molecule (GenBank): QHD43416.1
Assay category: TCell
Result: Positive-Low
Host: F 6 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Xiuyuan Lu; Yuki Hosono; Masamichi Nagae; Shigenari Ishizuka; Eri Ishikawa; Daisuke Motooka; Yuki Ozaki; Nicolas Sax; Yuichi Maeda; Yasuhiro Kato; Takayoshi Morita; Ryo Shinnakasu; Takeshi Inoue; Taishi Onodera; Takayuki Matsumura; Masaharu Shinkai; Takashi Sato; Shota Nakamura; Shunsuke Mori; Teru Kanda; Emi E Nakayama; Tatsuo Shioda; Tomohiro Kurosaki; Kiyoshi Takeda; Atsushi Kumanogoh; Hisashi Arase; Hironori Nakagami; Kazuo Yamashita; Yoshimasa Takahashi; Sho Yamasaki. "Identification of conserved SARS-CoV-2 spike epitopes that expand public cTfh clonotypes in mild COVID-19 patients." The Journal of experimental medicine (2021).

Epitope: CoV -2 S 353-367
Chemical type: Peptide from protein
Sequence: WNRKRISNCVADYSV
Position: 353-367
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell hybridoma
Culture conditions: Engineered
Reference: Zhen Zheng; Jillian L Kyzer; Adam Worob; Cody J Wenthur. "Family of Structurally Related Bioconjugates Yields Antibodies with Differential Selectivity against Ketamine and 6-Hydroxynorketamine." ACS chemical neuroscience (2021).

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 1290.0
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 86.4
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 7142.0
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Negative
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 331.8
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 74.1
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Negative
Host: M 6-8 weeks

Epitope: ketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 6-8 weeks

Epitope: 6-hydroxynorketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Host: M 6-8 weeks

Epitope: 6-hydroxynorketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 3971.0
Host: M 6-8 weeks

Epitope: 6-hydroxynorketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 1290.0
Host: M 6-8 weeks

Epitope: 6-hydroxynorketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 74.1
Host: M 6-8 weeks

Epitope: 6-hydroxynorketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive
Quantitative measurement: 358.4
Host: M 6-8 weeks

Epitope: 6-hydroxynorketamine
Chemical type: Other Non-Sequence
Assay category: BCell
Result: Positive-High
Quantitative measurement: 38.3
Host: M 6-8 weeks
Reference: Elena Lorente; Miguel Marcilla; Patricia G de la Sota; Adriana Quijada-Freire; Carmen Mir; Daniel López. "Acid Stripping after Infection Improves the Detection of Viral HLA Class I Natural Ligands Identified by Mass Spectrometry." International journal of molecular sciences (2021).

Epitope: B25-111-119
Chemical type: Peptide from protein
Sequence: TRFNPSVLK
Position: 75-83
Source molecule (GenBank): Q805H0.1
Assay category: MhcLigandElution
Result: Positive

Epitope: E5-274-284
Chemical type: Peptide from protein
Sequence: YRYDDDVENGF
Position: 273-283
Source molecule (GenBank): P21606.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RP35-275-289
Chemical type: Peptide from protein
Sequence: HRFDMTKVDVELFIK
Position: 275-289
Source molecule (GenBank): P24757.1
Assay category: MhcLigandElution
Result: Positive

Epitope: RP132-241-250
Chemical type: Peptide from protein
Sequence: SRVSLEFIRR
Position: 241-250
Source molecule (GenBank): Q76ZP7.1
Assay category: MhcLigandElution
Result: Positive
Reference: Kanokporn Polyiam; Waranyoo Phoolcharoen; Namphueng Butkhot; Chanya Srisaowakarn; Arunee Thitithanyanont; Prasert Auewarakul; Tawatchai Hoonsuwan; Marasri Ruengjitchatchawalya; Phenjun Mekvichitsaeng; Yaowaluck Maprang Roshorm. "Immunodominant linear B cell epitopes in the spike and membrane proteins of SARS-CoV-2 identified by immunoinformatics prediction and immunoassay." Scientific reports (2021).

Epitope: CoV2_M-2
Chemical type: Peptide from protein
Sequence: RYRIGNYKLNTDHSSSSDNIA
Position: 198-218
Source molecule (GenBank): P0DTC5.1
Assay category: BCell
Result: Positive

Epitope: CoV2_M-2
Chemical type: Peptide from protein
Sequence: RYRIGNYKLNTDHSSSSDNIA
Position: 198-218
Source molecule (GenBank): P0DTC5.1
Assay category: BCell
Result: Positive-Low

Epitope: CoV2_E-1.1
Chemical type: Peptide from protein
Sequence: YVYSRVKNLNSSRVP
Position: 57-71
Source molecule (GenBank): P0DTC4.1
Assay category: BCell
Result: Negative

Epitope: CoV2_E-1.1
Chemical type: Peptide from protein
Sequence: YVYSRVKNLNSSRVP
Position: 57-71
Source molecule (GenBank): P0DTC4.1
Assay category: BCell
Result: Positive-Low
Reference: Patrik D'haeseleer; Nicole M Collette; Victoria Lao; Brent W Segelke; Steven S Branda; Magdalena Franco. "Shotgun Immunoproteomic Approach for the Discovery of Linear B-Cell Epitopes in Biothreat Agents  and ." Frontiers in immunology (2021).

Epitope: Ft P24
Chemical type: Peptide from protein
Sequence: PANFLDVGGGATK
Position: 284-296
Source molecule (GenBank): Q5NHF3.1
Assay category: BCell
Result: Positive

Epitope: Ft P28
Chemical type: Peptide from protein
Sequence: IINEPTAAALAYGVDSK
Position: 170-186
Source molecule (GenBank): A0A3N3ZXM3.1
Assay category: BCell
Result: Positive

Epitope: Ft P38
Chemical type: Peptide from protein
Sequence: FHDLVTAR
Position: 531-538
Source molecule (GenBank): A0A3N3ZXM3.1
Assay category: BCell
Result: Positive

Epitope: Bp P19
Chemical type: Peptide from protein
Sequence: GYSVLEVVR
Position: 269-277
Source molecule (GenBank): Q3JPI3.1
Assay category: BCell
Result: Positive

Epitope: Bp P21
Chemical type: Peptide from protein
Sequence: LPLSVGCTTINK
Position: 80-91
Source molecule (GenBank): A8E8U4.1
Assay category: BCell
Result: Positive

Epitope: Bp P31
Chemical type: Peptide from protein
Sequence: FTFGQVELVSK
Position: 226-236
Source molecule (GenBank): A8EGE7.1
Assay category: BCell
Result: Positive

Epitope: Bp P43
Chemical type: Peptide from protein
Sequence: AAVELLFK
Position: 49-56
Source molecule (GenBank): A3P0B1.1
Assay category: BCell
Result: Positive