LiteFold/IEDB huggingface dataset:
Reference: Mengyu Zhang; Wei Xu; Lingjie Luo; Fenghui Guan; Xiangyao Wang; Pei Zhu; Jianhua Zhang; Xuyu Zhou; Feng Wang; Sheng Ye. "Identification and affinity enhancement of T-cell receptor targeting a KRAS<sup>G12V</sup> cancer neoantigen." Communications biology (2024).

Epitope: KRAS 5-14 G12D
Chemical type: Peptide, no natural source
Sequence: KLVVVGADGV
Assay category: MhcBinding
Result: Negative

Epitope: KRAS 6-14 G12C
Chemical type: Peptide, no natural source
Sequence: LVVVGACGV
Assay category: MhcBinding
Result: Negative
Reference: Julien Schmidt; Philippe Guillaume; Danijel Dojcinovic; Julia Karbach; George Coukos; Immanuel Luescher. "and cell-based analyses reveal strong divergence between prediction and observation of T-cell-recognized tumor antigen T-cell epitopes." The Journal of biological chemistry (2017).

Epitope: ESO 86-94
Chemical type: Peptide from protein
Sequence: RLLEFYLAM
Position: 86-94
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 86-94
Chemical type: Peptide from protein
Sequence: RLLEFYLAM
Position: 86-94
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 86-94
Chemical type: Peptide from protein
Sequence: RLLEFYLAM
Position: 86-94
Source molecule (GenBank): P78358.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 360.0

Epitope: ESO 91-98
Chemical type: Peptide from protein
Sequence: YLAMPFAT
Position: 91-98
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 91-98
Chemical type: Peptide from protein
Sequence: YLAMPFAT
Position: 91-98
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 91-98
Chemical type: Peptide from protein
Sequence: YLAMPFAT
Position: 91-98
Source molecule (GenBank): P78358.1
Assay category: MhcBinding
Result: Negative

Epitope: ESO 86-93
Chemical type: Peptide from protein
Sequence: RLLEFYLA
Position: 86-93
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 86-93
Chemical type: Peptide from protein
Sequence: RLLEFYLA
Position: 86-93
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 86-93
Chemical type: Peptide from protein
Sequence: RLLEFYLA
Position: 86-93
Source molecule (GenBank): P78358.1
Assay category: MhcBinding
Result: Negative

Epitope: ESO 158-165
Chemical type: Peptide from protein
Sequence: LLMWITQC
Position: 158-165
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 158-165
Chemical type: Peptide from protein
Sequence: LLMWITQC
Position: 158-165
Source molecule (GenBank): P78358.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: ESO 158-165
Chemical type: Peptide from protein
Sequence: LLMWITQC
Position: 158-165
Source molecule (GenBank): P78358.1
Assay category: MhcBinding
Result: Negative
Reference: Aliyu Maje Bello; Khuanjit Chaimongkolnukul; Kanokwan Poomputsa; Phenjun Mekvichitsaeng; Yaowaluck Maprang Roshorm. "Immunogenicity and immunodominant linear B-cell epitopes of a new DNA-based tetravalent vaccine against four major enteroviruses causing hand, foot, and mouth disease." Vaccine (2024).

Epitope: P25
Chemical type: Peptide from protein
Sequence: TSKSKYPLVIR
Position: 805-815
Source molecule (GenBank): UOI87912.1
Assay category: BCell
Result: Negative

Epitope: VP3-Knob
Chemical type: Peptide from protein
Sequence: VNNVPTNATSLMERL
Position: 378-392
Source molecule (GenBank): AQX83073.1
Assay category: BCell
Result: Negative
Reference: K P Mintz; K G Mann. "Detection of procollagen biosynthesis using peptide-specific antibodies." Matrix (Stuttgart, Germany) (1990).

Epitope: type I collagen alpha
Chemical type: Peptide from protein
Sequence: DDANVVRDRDLEVDTTSKSL
Assay category: BCell
Result: Positive

Epitope: type I collagen alpha
Chemical type: Peptide from protein
Sequence: DDANVVRDRDLEVDTTSKSL
Assay category: BCell
Result: Positive
Reference: Krzysztof P Bzymek; Yuelong Ma; Kendra A Avery; David A Horne; John C Williams. "Cyclization strategies of meditopes: affinity and diffraction studies of meditope-Fab complexes." Acta crystallographica. Section F, Structural biology communications (2016).

Epitope: MPT-Cys Meditope: (MPT)QFDLSTRRLKC
Chemical type: Peptide, no natural source
Sequence: CQFDLSTRRLKC
Assay category: BCell
Result: Positive
Quantitative measurement: 560.0

Epitope: MPT-Cys Meditope: (MPT)QFDLSTRRLKC
Chemical type: Peptide, no natural source
Sequence: CQFDLSTRRLKC
Assay category: BCell
Result: Positive
Quantitative measurement: 21000.0

Epitope: MPT-Cys Meditope: (MPT)QFDLSTRRLKC
Chemical type: Peptide, no natural source
Sequence: CQFDLSTRRLKC
Assay category: BCell
Result: Positive
Quantitative measurement: 0.012

Epitope: MPT-Cys Meditope: (MPT)QFDLSTRRLKC
Chemical type: Peptide, no natural source
Sequence: CQFDLSTRRLKC
Assay category: BCell
Result: Positive
Quantitative measurement: 2.49
Reference: Ying Huang; Wenzhu Zhai; Zhen Wang; Yuheng He; Chunhao Tao; Yuanyuan Chu; Zhongbao Pang; Hongfei Zhu; Hong Jia. "Analysis of the Immunogenicity of African Swine Fever F317L Protein and Screening of T Cell Epitopes." Animals : an open access journal from MDPI (2024).

Epitope: F2
Chemical type: Peptide from protein
Sequence: SNAHITQTM
Position: 26-34
Source molecule (GenBank): UFD97811.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: F10
Chemical type: Peptide from protein
Sequence: KSKRSFKEY
Position: 76-84
Source molecule (GenBank): UFD97811.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: F16
Chemical type: Peptide from protein
Sequence: EAMMPADIY
Position: 148-156
Source molecule (GenBank): UFD97811.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: F21
Chemical type: Peptide from protein
Sequence: CGGMPSICD
Position: 178-186
Source molecule (GenBank): UFD97811.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: F24
Chemical type: Peptide from protein
Sequence: IIVDLWANEN
Position: 219-228
Source molecule (GenBank): UFD97811.1
Assay category: TCell
Result: Negative
Host: F 6-8 weeks
Cell type: T cell
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Chao Li; Xuan-Ying Si; Xiao-Ge Wang; Zhi-Wei Yan; Hao-Yu Hou; Long-Qi You; Yin-Long Chen; Ang-Ke Zhang; Na Wang; Ai-Jun Sun; Yong-Kun Du; Gai-Ping Zhang. "Preparation and epitope analysis of monoclonal antibodies against African swine fever virus DP96R protein." BMC veterinary research (2024).

Epitope: Epitope of mAbs 5C10D4C9 and 9C10F9D5
Chemical type: Peptide from protein
Sequence: YWKGIKRGND
Position: 55-64
Source molecule (GenBank): AYW34127.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: Epitope of mAbs 5C10D4C9 and 9C10F9D5
Chemical type: Peptide from protein
Sequence: YWKGIKRGND
Position: 55-64
Source molecule (GenBank): AYW34127.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Yuhe R Yang; Julianna Han; Hailee R Perrett; Sara T Richey; Alesandra J Rodriguez; Abigail M Jackson; Rebecca A Gillespie; Sarah O'Connell; Julie E Raab; Lauren Y Cominsky; Ankita Chopde; Masaru Kanekiyo; Katherine V Houser; Grace L Chen; Adrian B McDermott; Sarah F Andrews; Andrew B Ward. "Immune memory shapes human polyclonal antibody responses to H2N2 vaccination." Cell reports (2024).

Epitope: Epitope of 1-1-1E04 Fab on H2 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: T141, T142, T143, G144, G145, S146, R147, S152, N154, P155, W163, T165, K167, N196, T199, E200, T203, L204, K232, Q236, G237
Source molecule (GenBank): BAF48641.1
Assay category: BCell
Result: Positive
Host:  52-70 years

Epitope: Epitope of 1-1-1E04 Fab on H2 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: T141, T142, T143, G144, G145, S146, R147, S152, N154, P155, W163, T165, K167, N196, T199, E200, T203, L204, K232, Q236, G237
Source molecule (GenBank): BAF48641.1
Assay category: BCell
Result: Positive
Host:  52-70 years

Epitope: Epitope of 1-1-1E04 Fab on H2 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: T141, T142, T143, G144, G145, S146, R147, S152, N154, P155, W163, T165, K167, N196, T199, E200, T203, L204, K232, Q236, G237
Source molecule (GenBank): BAF48641.1
Assay category: BCell
Result: Positive
Host:  52-70 years

Epitope: Epitope of 1-1-1E04 Fab on H2 HA
Chemical type: Discontinuous protein residues
Discontinuous residues: T141, T142, T143, G144, G145, S146, R147, S152, N154, P155, W163, T165, K167, N196, T199, E200, T203, L204, K232, Q236, G237
Source molecule (GenBank): BAF48641.1
Assay category: BCell
Result: Positive
Host:  52-70 years
Reference: Samuel Liwei Leong; Lawton Murdolo; Janesha C Maddumage; Marios Koutsakos; Katherine Kedzierska; Anthony W Purcell; Stephanie Gras; Emma J Grant. "Characterisation of novel influenza-derived HLA-B*18:01-restricted epitopes." Clinical & translational immunology (2024).

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: TCell
Result: Negative
Host:  29-53 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: TCell
Result: Positive
Host:  29-53 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: TCell
Result: Positive
Host:  29-53 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: TCell
Result: Positive
Host:  29-53 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: TCell
Result: Positive
Host:  29-53 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: TCell
Result: Positive
Host:  29-53 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 62.51

Epitope: M1 5
Chemical type: Peptide from protein
Sequence: TEVETYVL
Position: 5-12
Source molecule (GenBank): ABH05855.1
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.45
Reference: Joseph S Gish; Lexi Jarvis; Kenneth C Childers; Shaun C Peters; Connor S Garrels; Ian W Smith; H Trent Spencer; Christopher B Doering; Pete Lollar; P Clint Spiegel. "Structure of blood coagulation factor VIII in complex with an anti-C1 domain pathogenic antibody inhibitor." Blood (2021).

Epitope: Epitope of 2A9 Fab on Blood Coagulation Factor VIII
Chemical type: Discontinuous protein residues
Discontinuous residues: T1763, Q1764, S2059, K2084, P2086, F2087, W2089, I2121, M2123, K2129, W2131, T2133, T2141, R2169, H2171, P2172, T2173, H2174, Y2175
Source molecule (GenBank): P00451.1
Assay category: BCell
Result: Positive
Quantitative measurement: 3.92
Host:  9-12 weeks

Epitope: Epitope of 2A9 Fab on Blood Coagulation Factor VIII
Chemical type: Discontinuous protein residues
Discontinuous residues: T1763, Q1764, S2059, K2084, P2086, F2087, W2089, I2121, M2123, K2129, W2131, T2133, T2141, R2169, H2171, P2172, T2173, H2174, Y2175
Source molecule (GenBank): P00451.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.1
Host:  9-12 weeks

Epitope: Epitope of 2A9 Fab on Blood Coagulation Factor VIII
Chemical type: Discontinuous protein residues
Discontinuous residues: T1763, Q1764, S2059, K2084, P2086, F2087, W2089, I2121, M2123, K2129, W2131, T2133, T2141, R2169, H2171, P2172, T2173, H2174, Y2175
Source molecule (GenBank): P00451.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00022
Host:  9-12 weeks
Reference: Pengju Yao; Mingjie Gao; Weiyi Hu; Jiahao Wang; Yuhao Wang; Qingsong Wang; Jianguo Ji. "Proteogenomic analysis identifies neoantigens and bacterial peptides as immunotherapy targets in colorectal cancer." Pharmacological research (2024).

Epitope: T1-1
Chemical type: Peptide from protein
Sequence: IPQAKEMFI
Position: 388-396
Source molecule (GenBank): Q9BXT5.2
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 223 255 817 311 308

Epitope: T2-5
Chemical type: Peptide from protein
Sequence: KVLEYVIKV
Position: 278-286
Source molecule (GenBank): P43355.1
Assay category: TCell
Result: Positive
MHC allele types: 143 544 37 43 305 582
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: T2-5
Chemical type: Peptide from protein
Sequence: KVLEYVIKV
Position: 278-286
Source molecule (GenBank): P43355.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 544 37 43 305 582

Epitope: T2-7
Chemical type: Peptide from protein
Sequence: YGSEWSVY
Position: 304-311
Source molecule (GenBank): Q5T6F0.1
Assay category: TCell
Result: Negative
MHC allele types: 143 544 37 43 305 582
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: T2-7
Chemical type: Peptide from protein
Sequence: YGSEWSVY
Position: 304-311
Source molecule (GenBank): Q5T6F0.1
Assay category: MhcLigandElution
Result: Positive
MHC allele types: 143 544 37 43 305 582

Epitope: T6-B3
Chemical type: Peptide from protein
Sequence: VLDDITLTI
Position: 500-508
Source molecule (GenBank): A0A174PIK9
Assay category: TCell
Result: Positive
MHC allele types: 215 204 28 45 305 308
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Julie S Nielsen; Andrew R Chang; Darin A Wick; Colin G Sedgwick; Zusheng Zong; Andrew J Mungall; Spencer D Martin; Natalie N Kinloch; Susann Ott-Langer; Zabrina L Brumme; Steven P Treon; Joseph M Connors; Randy D Gascoyne; John R Webb; Brian R Berry; Ryan D Morin; Nicol Macpherson; Brad H Nelson. "Mapping the human T cell repertoire to recurrent driver mutations in MYD88 and EZH2 in lymphoma." Oncoimmunology (2017).

Epitope: GAHQKRPI
Chemical type: Peptide, no natural source
Sequence: GAHQKRPI
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SPGAHQKRP
Chemical type: Peptide, no natural source
Sequence: SPGAHQKRP
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SPGAHQKRPI
Chemical type: Peptide, no natural source
Sequence: SPGAHQKRPI
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: RPIPIKYKAM
Chemical type: Peptide, no natural source
Sequence: RPIPIKYKAM
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: GAHQKRPIPIK
Chemical type: Peptide, no natural source
Sequence: GAHQKRPIPIK
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: PIPIKYKAMKK
Chemical type: Peptide, no natural source
Sequence: PIPIKYKAMKK
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: EFISEFCGE
Chemical type: Peptide, no natural source
Sequence: EFISEFCGE
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: QKNEFISEFCG
Chemical type: Peptide, no natural source
Sequence: QKNEFISEFCG
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: ISEFCGEIISQ
Chemical type: Peptide, no natural source
Sequence: ISEFCGEIISQ
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: SEFCGEIISQD
Chemical type: Peptide, no natural source
Sequence: SEFCGEIISQD
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: NCGEIISQ
Chemical type: Peptide, no natural source
Sequence: NCGEIISQ
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: FISENCGEII
Chemical type: Peptide, no natural source
Sequence: FISENCGEII
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Maiko Matsushita; Yohei Otsuka; Naoya Tsutsumida; Chiaki Tanaka; Akane Uchiumi; Koji Ozawa; Takuma Suzuki; Daiju Ichikawa; Hiroyuki Aburatani; Shinichiro Okamoto; Yutaka Kawakami; Yutaka Hattori. "Identification of Novel HLA-A*24:02-Restricted Epitope Derived from a Homeobox Protein Expressed in Hematological Malignancies." PloS one (2016).

Epitope: PEPP2 117-125
Chemical type: Peptide from protein
Sequence: QYSRPQGAV
Position: 117-125
Source molecule (GenBank): KAI2600657.1
Assay category: MhcBinding
Result: Positive
Reference: Alyssa Ball; Kriti Khatri; Jill Glesner; Lisa D Vailes; Sabina Wünschmann; Scott A Gabel; Geoffrey A Mueller; Jian Zhang; R Stokes Peebles; Martin D Chapman; Scott A Smith; Maksymilian Chruszcz; Anna Pomés. "Structural analysis of human IgE monoclonal antibody epitopes on dust mite allergen Der p 2." The Journal of allergy and clinical immunology (2024).

Epitope: Epitope of 2F10 mAb on Der p 2.0103
Chemical type: Discontinuous protein residues
Discontinuous residues: R31, I58, D59, G60, L61, E62, V63, D64, I97, P99, K100, S101, E102, N103
Source molecule (GenBank): AFJ68069.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.0317

Epitope: Epitope of 2F10 mAb on Der p 2.0103
Chemical type: Discontinuous protein residues
Discontinuous residues: R31, I58, D59, G60, L61, E62, V63, D64, I97, P99, K100, S101, E102, N103
Source molecule (GenBank): AFJ68069.1
Assay category: BCell
Result: Positive
Quantitative measurement: 310000.0

Epitope: Epitope of 2F10 mAb on Der p 2.0103
Chemical type: Discontinuous protein residues
Discontinuous residues: R31, I58, D59, G60, L61, E62, V63, D64, I97, P99, K100, S101, E102, N103
Source molecule (GenBank): AFJ68069.1
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00000809
Reference: M Y Hardy; L M Henneken; A K Russell; Y Okura; A Mizoroki; Y Ozono; S Kobayashi; Y Murakami; J A Tye-Din. "A bispecific antibody targeting HLA-DQ2.5-gluten peptides potently blocks gluten-specific T cells induced by gluten ingestion in patients with celiac disease." Clinical immunology (Orlando, Fla.) (2024).

Epitope: Hordein - Hor1/Hor2 peptide 1
Chemical type: Peptide, no natural source
Sequence: QPFPQPEQPIPYQ
Assay category: BCell
Result: Positive

Epitope: Hordein - Hor1/Hor2 peptide 1
Chemical type: Peptide, no natural source
Sequence: QPFPQPEQPIPYQ
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Nadine E Struckman; Rob C M de Jong; M Willy Honders; Sophie-Anne I Smith; Dyantha I van der Lee; Georgia Koutsoumpli; Arnoud H de Ru; Jan-Henrik Mikesch; Peter A van Veelen; J H Frederik Falkenburg; Marieke Griffioen. "Hotspot DNA Methyltransferase 3A () and Isocitrate Dehydrogenase 1 and 2 () Mutations in Acute Myeloid Leukemia and Their Relevance as Targets for Immunotherapy." Biomedicines (2024).

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: DNMT3A R882H
Chemical type: Peptide, no natural source
Sequence: YTDVSNMSHLA
Assay category: MhcLigandElution
Result: Positive
Reference: Lorenzo Maso; Epsa Rajak; Injin Bang; Akiko Koide; Takamitsu Hattori; Benjamin G Neel; Shohei Koide. "Molecular basis for antibody recognition of multiple drug-peptide/MHC complexes." Proceedings of the National Academy of Sciences of the United States of America (2024).

Epitope: soto-p7-7
Chemical type: Peptide, no natural source
Sequence: CVVGAGGVGK
Assay category: MhcBinding
Result: Positive

Epitope: soto-p7-7
Chemical type: Peptide, no natural source
Sequence: CVVGAGGVGK
Assay category: MhcBinding
Result: Positive

Epitope: soto-p7-02
Chemical type: Peptide, no natural source
Sequence: VLVGACGVGV
Assay category: MhcBinding
Result: Positive
Reference: Noam Levin; Sanghyun P Kim; Charles A Marquardt; Nolan R Vale; Zhiya Yu; Sivasish Sindiri; Jared J Gartner; Maria Parkhurst; Sri Krishna; Frank J Lowery; Nikolaos Zacharakis; Lior Levy; Todd D Prickett; Tiffany Benzine; Satyajit Ray; Robert V Masi; Billel Gasmi; Yong Li; Rafiqul Islam; Alakesh Bera; Stephanie L Goff; Paul F Robbins; Steven A Rosenberg. "Neoantigen-specific stimulation of tumor-infiltrating lymphocytes enables effective TCR isolation and expansion while preserving stem-like memory phenotypes." Journal for immunotherapy of cancer (2024).

Epitope: POU3F3
Chemical type: Peptide, no natural source
Sequence: KMVQSDFMQGAMPASNGGHMLSHAH
Assay category: TCell
Result: Positive
Cell type: tumor infiltrating lymphocyte
Tissue: breast
Culture conditions: Non-antigen specific activation
Reference: Gabriel Moreira; Rodrigo Maia; Nathália Soares; Thais Ostolin; Wendel Coura-Vital; Rodrigo Aguiar-Soares; Jeronimo Ruiz; Daniela Resende; Rory de Brito; Alexandre Reis; Bruno Roatt. "Synthetic Peptides Selected by Immunoinformatics as Potential Tools for the Specific Diagnosis of Canine Visceral Leishmaniasis." Microorganisms (2024).

Epitope: Peptide 53
Chemical type: Peptide from protein
Sequence: SRRPPPLDPEEPEKV
Position: 171-185
Source molecule (GenBank): XP_001464998.1
Assay category: BCell
Result: Positive