LiteFold/IEDB huggingface dataset:
Reference: Brian M Sullivan; Saori Sakabe; Jessica N Hartnett; Nhi Ngo; Augustine Goba; Mambu Momoh; John Demby Sandi; Lansana Kanneh; Beatrice Cubitt; Selma D Garcia; Brian C Ware; Dylan Kotliar; Refugio Robles-Sikisaka; Karthik Gangavarapu; Luis Branco; Philomena Eromon; Ikponmwosa Odia; Ephraim Ogbaini-Emovon; Onikepe Folarin; Sylvanus Okogbenin; Peter O Okokhere; Christian Happi; Juan Carlos de la Torre; Pardis C Sabeti; Kristian G Andersen; Robert F Garry; Donald S Grant; John S Schieffelin; Michael B A Oldstone. "High crossreactivity of human T cell responses between Lassa virus lineages." PLoS pathogens (2020).

Epitope: NP 344-377
Chemical type: Peptide from protein
Sequence: PQKADSNNSSKSLQSAGFTAGLTYSQLMTLKDAM
Position: 344-377
Source molecule (GenBank): P13699.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NP 344-377
Chemical type: Peptide from protein
Sequence: PQKADSNNSSKSLQSAGFTAGLTYSQLMTLKDAM
Position: 344-377
Source molecule (GenBank): P13699.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NP 384-417
Chemical type: Peptide from protein
Sequence: AKTWMDIEGRPEDPVEIALYQPSSGCYIHFFREP
Position: 384-417
Source molecule (GenBank): P13699.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NP 384-417
Chemical type: Peptide from protein
Sequence: AKTWMDIEGRPEDPVEIALYQPSSGCYIHFFREP
Position: 384-417
Source molecule (GenBank): P13699.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NP 470-514
Chemical type: Peptide from protein
Sequence: LLESQGRKDIKLIDIALSKTDSRKYENAVWDQYKDLCHMHTGVVV
Position: 470-514
Source molecule (GenBank): P13699.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: NP 470-514
Chemical type: Peptide from protein
Sequence: LLESQGRKDIKLIDIALSKTDSRKYENAVWDQYKDLCHMHTGVVV
Position: 470-514
Source molecule (GenBank): P13699.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GPC 350-381
Chemical type: Peptide from protein
Sequence: IMKNHLRDIMGIPYCNYSKYWYLNHTTTGRTS
Position: 350-381
Source molecule (GenBank): P08669.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: GPC 350-381
Chemical type: Peptide from protein
Sequence: IMKNHLRDIMGIPYCNYSKYWYLNHTTTGRTS
Position: 350-381
Source molecule (GenBank): P08669.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: James Duehr; Meagan McMahon; Brandi Williamson; Fatima Amanat; Alan Durbin; David W Hawman; Danny Noack; Skyler Uhl; Gene S Tan; Heinz Feldmann; Florian Krammer. "Neutralizing Monoclonal Antibodies against the Gn and the Gc of the Andes Virus Glycoprotein Spike Complex Protect from Virus Challenge in a Preclinical Hamster Model." mBio (2020).

Epitope: GnGc N108
Chemical type: Discontinuous protein residues
Discontinuous residues: N108
Source molecule (GenBank): AAO86638.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: GnGc N108
Chemical type: Discontinuous protein residues
Discontinuous residues: N108
Source molecule (GenBank): AAO86638.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: GnGc N108
Chemical type: Discontinuous protein residues
Discontinuous residues: N108
Source molecule (GenBank): AAO86638.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks

Epitope: GnGc N108
Chemical type: Discontinuous protein residues
Discontinuous residues: N108
Source molecule (GenBank): AAO86638.1
Assay category: BCell
Result: Positive
Host: F 6-8 weeks
Reference: Kristina M Geiger; Daniel Guignard; Che Yang; Jean-Pierre Bikorimana; Bruno E Correia; Sophie Houard; Catherine Mkindi; Claudia A Daubenberger; François Spertini; Giampietro Corradin; Régine Audran. "Epitope Mapping and Fine Specificity of Human T and B Cell Responses for Novel Candidate Blood-Stage Malaria Vaccine P27A." Frontiers in immunology (2020).

Epitope: P2
Chemical type: Peptide from protein
Sequence: DKNLVKQENDNKDEARGNDN
Position: 233-252
Source molecule (GenBank): XP_966024.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P2
Chemical type: Peptide from protein
Sequence: DKNLVKQENDNKDEARGNDN
Position: 233-252
Source molecule (GenBank): XP_966024.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P7
Chemical type: Peptide from protein
Sequence: DNAKSCSGDEKVITSDNGKS
Position: 283-302
Source molecule (GenBank): XP_966024.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P7
Chemical type: Peptide from protein
Sequence: DNAKSCSGDEKVITSDNGKS
Position: 283-302
Source molecule (GenBank): XP_966024.1
Assay category: TCell
Result: Positive-Low
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P8
Chemical type: Peptide from protein
Sequence: KVITSDNGKSYDYVKNESEE
Position: 293-312
Source molecule (GenBank): XP_966024.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: P8
Chemical type: Peptide from protein
Sequence: KVITSDNGKSYDYVKNESEE
Position: 293-312
Source molecule (GenBank): XP_966024.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Véronique Corbière; Jérôme Segers; Rémi Desmet; Sophie Lecher; Marc Loyens; Emmanuelle Petit; Oleg Melnyk; Camille Locht; Françoise Mascart. "Natural T Cell Epitope Containing Methyl Lysines on Mycobacterial Heparin-Binding Hemagglutinin." Journal of immunology (Baltimore, Md. : 1950) (2020).

Epitope: HBH methylated P26
Chemical type: Peptide from protein
Sequence: AKLVGIELPKKAAPAKKA
Position: 152-169
Source molecule (GenBank): A1KFU9.1
Assay category: TCell
Result: Positive
Host:  26-60 years
Cell type: PBMC
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Anita N Kremer; Judith Bausenwein; Ellie Lurvink; Andreas E Kremer; Caroline E Rutten; Cornelis A M van Bergen; Sascha Kretschmann; Edith van der Meijden; Maria W Honders; Daniela Mazzeo; Colin Watts; Andreas Mackensen; J H Frederik Falkenburg; Marieke Griffioen. "Discovery and Differential Processing of HLA Class II-Restricted Minor Histocompatibility Antigen LB-PIP4K2A-1S and Its Allelic Variant by Asparagine Endopeptidase." Frontiers in immunology (2020).

Epitope: Recipient LB-MFSD1-1S
Chemical type: Peptide from protein
Sequence: RGASAAPGALPALC
Position: 70-83
Source molecule (GenBank): BAG59980.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Cell Line / Clone
Epitope: WB2191
Chemical type: Peptide from protein
Sequence: YLNDHLEPWI
Position: 173-182
Source molecule (GenBank): Q5TE64
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WB3339
Chemical type: Peptide from protein
Sequence: SLYNTVATLY
Position: 7-16
Source molecule (GenBank): CAA72830.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WA2131
Chemical type: Peptide from protein
Sequence: VTEHDTLLY
Position: 245-253
Source molecule (GenBank): P16790.1
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WB3474
Chemical type: Peptide from protein
Sequence: KVLEYVIKV
Position: 285-293
Source molecule (GenBank): AAL37897.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WK2138
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): AKI22339.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: WB2177
Chemical type: Peptide from protein
Sequence: RMFPNAPYL
Position: 199-207
Source molecule (GenBank): NP_077744.4
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Michelle P Aranha; Thomas A Penfound; Jay A Spencer; Rupesh Agarwal; Jerome Baudry; James B Dale; Jeremy C Smith. "Structure-based group A streptococcal vaccine design: Helical wheel homology predicts antibody cross-reactivity among streptococcal M protein-derived peptides." The Journal of biological chemistry (2020).

Epitope: M15
Chemical type: Peptide from protein
Sequence: ESPSGQSSQSSQSGWKLTIEEYNKLLDENEKLKEKNEEYLEKIGEQEERQ
Position: 1-50
Source molecule (GenBank): AHM94178.1
Assay category: BCell
Result: Positive-Low

Epitope: M15
Chemical type: Peptide from protein
Sequence: ESPSGQSSQSSQSGWKLTIEEYNKLLDENEKLKEKNEEYLEKIGEQEERQ
Position: 1-50
Source molecule (GenBank): AHM94178.1
Assay category: BCell
Result: Negative
Reference: Elisa Mazzoni; Ilaria Bononi; Silvia Pietrobon; Elena Torreggiani; Marika Rossini; Maura Pugliatti; Ilaria Casetta; Massimiliano Castellazzi; Enrico Granieri; Giovanni Guerra; Fernanda Martini; Mauro Tognon. "Specific antibodies reacting to JC polyomavirus capsid protein mimotopes in sera from multiple sclerosis and other neurological diseases-affected patients." Journal of cellular physiology (2020).

Epitope: JCPyVVP1 peptide N
Chemical type: Peptide from protein
Sequence: LMNVHSNGQATHDNGAGK
Position: 118-135
Source molecule (GenBank): AEC15099.1
Assay category: BCell
Result: Positive-Low
Host:  13-68 years

Epitope: JCPyVVP1 peptide N
Chemical type: Peptide from protein
Sequence: LMNVHSNGQATHDNGAGK
Position: 118-135
Source molecule (GenBank): AEC15099.1
Assay category: BCell
Result: Positive-Low
Host:  18-88 years

Epitope: JCPyVVP1 peptide N
Chemical type: Peptide from protein
Sequence: LMNVHSNGQATHDNGAGK
Position: 118-135
Source molecule (GenBank): AEC15099.1
Assay category: BCell
Result: Positive-Low
Host:  21-85 years

Epitope: JCPyVVP1 peptide N
Chemical type: Peptide from protein
Sequence: LMNVHSNGQATHDNGAGK
Position: 118-135
Source molecule (GenBank): AEC15099.1
Assay category: BCell
Result: Positive
Host:  17-96 years
Reference: Gennady L Burygin; Polina I Abronina; Nikita M Podvalnyy; Sergey A Staroverov; Leonid O Kononov; Lev A Dykman. "Preparation and in vivo evaluation of glyco-gold nanoparticles carrying synthetic mycobacterial hexaarabinofuranoside." Beilstein journal of nanotechnology (2020).

Epitope: hexaarabinofuranoside (Ara6 ) glycoside 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative

Epitope: hexaarabinofuranoside (Ara6 ) glycoside 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: hexaarabinofuranoside (Ara6 ) glycoside 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: hexaarabinofuranoside (Ara6 ) glycoside 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive

Epitope: hexaarabinofuranoside (Ara6 ) glycoside 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Positive-Low

Epitope: hexaarabinofuranoside (Ara6 ) glycoside 2
Chemical type: Carbohydrate fragment
Assay category: BCell
Result: Negative
Reference: Ulla Kring Hansen; Sofie Ramskov; Anne-Mette Bjerregaard; Annie Borch; Rikke Andersen; Arianna Draghi; Marco Donia; Amalie Kai Bentzen; Andrea Marion Marquard; Zoltan Szallasi; Aron Charles Eklund; Inge Marie Svane; Sine Reker Hadrup. "Tumor-Infiltrating T Cells From Clear Cell Renal Cell Carcinoma Patients Recognize Neoepitopes Derived From Point and Frameshift Mutations." Frontiers in immunology (2020).

Epitope: 95
Chemical type: Peptide, no natural source
Sequence: FRSIYLNTLL
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: kidney
Culture conditions: Direct Ex Vivo

Epitope: 224
Chemical type: Peptide, no natural source
Sequence: KMILTGILLI
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: kidney
Culture conditions: Direct Ex Vivo

Epitope: 350
Chemical type: Peptide, no natural source
Sequence: YLCAGAVYF
Assay category: TCell
Result: Positive
Cell type: T cell
Tissue: kidney
Culture conditions: Direct Ex Vivo
Reference: Rebecca S Goydel; Justus Weber; Haiyong Peng; Junpeng Qi; Jo Soden; Jim Freeth; HaJeung Park; Christoph Rader. "Affinity maturation, humanization, and co-crystallization of a rabbit anti-human ROR2 monoclonal antibody for therapeutic applications." The Journal of biological chemistry (2020).

Epitope: Epitope of hX3.12.6 scFv on ROR2
Chemical type: Discontinuous protein residues
Discontinuous residues: Q343, H344, P345, H346, S347, H348, H349, L350, S351, T353, D354, F355, Q371, W376, F378, K382, R385
Source molecule (GenBank): Q01974.2
Assay category: BCell
Result: Positive
Quantitative measurement: 0.00022

Epitope: Epitope of hX3.12.6 scFv on ROR2
Chemical type: Discontinuous protein residues
Discontinuous residues: Q343, H344, P345, H346, S347, H348, H349, L350, S351, T353, D354, F355, Q371, W376, F378, K382, R385
Source molecule (GenBank): Q01974.2
Assay category: BCell
Result: Positive

Epitope: Epitope of hX3.12.6 scFv on ROR2
Chemical type: Discontinuous protein residues
Discontinuous residues: Q343, H344, P345, H346, S347, H348, H349, L350, S351, T353, D354, F355, Q371, W376, F378, K382, R385
Source molecule (GenBank): Q01974.2
Assay category: BCell
Result: Positive
Quantitative measurement: 3.8

Epitope: Epitope of hX3.12.6 scFv on ROR2
Chemical type: Discontinuous protein residues
Discontinuous residues: Q343, H344, P345, H346, S347, H348, H349, L350, S351, T353, D354, F355, Q371, W376, F378, K382, R385
Source molecule (GenBank): Q01974.2
Assay category: BCell
Result: Positive
Quantitative measurement: 60000.0

Epitope: Epitope of hX3.12.6 scFv on ROR2
Chemical type: Discontinuous protein residues
Discontinuous residues: Q343, H344, P345, H346, S347, H348, H349, L350, S351, T353, D354, F355, Q371, W376, F378, K382, R385
Source molecule (GenBank): Q01974.2
Assay category: BCell
Result: Positive
Quantitative measurement: 1.34

Epitope: Epitope of hX3.12.6 scFv on ROR2
Chemical type: Discontinuous protein residues
Discontinuous residues: Q343, H344, P345, H346, S347, H348, H349, L350, S351, T353, D354, F355, Q371, W376, F378, K382, R385
Source molecule (GenBank): Q01974.2
Assay category: BCell
Result: Positive
Reference: Wael Awad; Geraldine J M Ler; Weijun Xu; Andrew N Keller; Jeffrey Y W Mak; Xin Yi Lim; Ligong Liu; Sidonia B G Eckle; Jérôme Le Nours; James McCluskey; Alexandra J Corbett; David P Fairlie; Jamie Rossjohn. "The molecular basis underpinning the potency and specificity of MAIT cell antigens." Nature immunology (2020).

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive
Quantitative measurement: 1.96

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Negative
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Negative
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Negative
Cell type: T cell CD3+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 47.0

Epitope: 4′-OH-butyl-5- OP-U
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive
Quantitative measurement: 1.96

Epitope: 3'-OH-propyl-L-7-Me
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Negative
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: 3'-OH-propyl-L-7-Me
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive-Low

Epitope: 2'-OH-ethyl-L-7-Me
Chemical type: Other Non-Sequence
Assay category: TCell
Result: Positive-Low
Cell type: Jurkat cell (T cell)
Tissue: blood
Culture conditions: Engineered

Epitope: 2'-OH-ethyl-L-7-Me
Chemical type: Other Non-Sequence
Assay category: MhcBinding
Result: Positive-Low
Reference: Monique T A de Beijer; Diahann T S L Jansen; Yingying Dou; Wim J E van Esch; Juk Yee Mok; Mariëlle J P Maas; Giso Brasser; Robert A de Man; Andrea M Woltman; Sonja I Buschow. "Discovery and Selection of Hepatitis B Virus-Derived T Cell Epitopes for Global Immunotherapy Based on Viral Indispensability, Conservation, and HLA-Binding Strength." Journal of virology (2020).

Epitope: p54-63
Chemical type: Peptide from protein
Sequence: HKVGNFTGLY
Position: 54-63
Source molecule (GenBank): BAB20451.1
Assay category: MhcBinding
Result: Negative

Epitope: x103-112
Chemical type: Peptide from protein
Sequence: MSTTDLEAYF
Position: 103-112
Source molecule (GenBank): BAA04917.1
Assay category: MhcBinding
Result: Negative

Epitope: x104-112
Chemical type: Peptide from protein
Sequence: STTDLEAYF
Position: 104-112
Source molecule (GenBank): BAA04917.1
Assay category: MhcBinding
Result: Negative

Epitope: p403-412
Chemical type: Peptide from protein
Sequence: SWPKFAVPNL
Position: 392-401
Source molecule (GenBank): BAB20451.1
Assay category: TCell
Result: Positive
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated

Epitope: p403-412
Chemical type: Peptide from protein
Sequence: SWPKFAVPNL
Position: 392-401
Source molecule (GenBank): BAB20451.1
Assay category: MhcBinding
Result: Positive

Epitope: x89-97
Chemical type: Peptide from protein
Sequence: LPKVLHKRT
Position: 89-97
Source molecule (GenBank): CAC51277.1
Assay category: MhcBinding
Result: Negative

Epitope: p482-490
Chemical type: Peptide from protein
Sequence: CSRNLYVSL
Position: 136-144
Source molecule (GenBank): ACN72266.1
Assay category: MhcBinding
Result: Negative

Epitope: x54-63
Chemical type: Peptide from protein
Sequence: SLRGLPVCAF
Position: 54-63
Source molecule (GenBank): BAA04917.1
Assay category: MhcBinding
Result: Negative
Reference: C Pinilla; J Buencamino; J R Appel; R A Houghten; J A Brassard; Z M Ruggeri. "Two antipeptide monoclonal antibodies that recognize adhesive sequences in fibrinogen: identification of antigenic determinants and unrelated sequences using synthetic combinatorial libraries." Biomedical peptides, proteins & nucleic acids : structure, synthesis & biological activity (1995).

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive
Quantitative measurement: 592000.0

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive-Low
Quantitative measurement: 1420000.0

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive
Quantitative measurement: 340000.0

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive-High
Quantitative measurement: 40.0

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive-Low

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive
Quantitative measurement: 22.0

Epitope: fib alpha 87-100
Chemical type: Peptide from protein
Sequence: TTNIMEILRGDFSS
Position: 106-119
Source molecule (GenBank): P02671.2
Assay category: BCell
Result: Positive
Quantitative measurement: 618000.0
Reference: Jingxian Zhao; Abeer N Alshukairi; Salim A Baharoon; Waleed A Ahmed; Ahmad A Bokhari; Atef M Nehdi; Laila A Layqah; Mohammed G Alghamdi; Manal M Al Gethamy; Ashraf M Dada; Imran Khalid; Mohamad Boujelal; Sameera M Al Johani; Leatrice Vogel; Kanta Subbarao; Ashutosh Mangalam; Chaorong Wu; Patrick Ten Eyck; Stanley Perlman; Jincun Zhao. "Recovery from the Middle East respiratory syndrome is associated with antibody and T-cell responses." Science immunology (2017).

Epitope: MERS-N33
Chemical type: Peptide from protein
Sequence: DHGNPVYFLRYSGAIKLDPK
Position: 321-340
Source molecule (GenBank): AFS88943.1
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: lung
Culture conditions: Direct Ex Vivo

Epitope: MERS-N33
Chemical type: Peptide from protein
Sequence: DHGNPVYFLRYSGAIKLDPK
Position: 321-340
Source molecule (GenBank): AFS88943.1
Assay category: TCell
Result: Positive
Host:  32-39 years
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: MERS-M13
Chemical type: Peptide from protein
Sequence: VPFGGTTVVRPLVEDSTSVT
Position: 121-140
Source molecule (GenBank): AFS88942.1
Assay category: TCell
Result: Positive
MHC allele types: 234 236 247 283 561 286 1 8 932
Host:  32-59 years
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Renaud A Du Pasquier; Marion C Stein; Marco A Lima; Xin Dang; Jims Jean-Jacques; Yue Zheng; Norman L Letvin; Igor J Koralnik. "JC virus induces a vigorous CD8+ cytotoxic T cell response in multiple sclerosis patients." Journal of neuroimmunology (2006).

Epitope: VP1p100
Chemical type: Peptide from protein
Sequence: ILMWEAVTL
Position: 100-108
Source molecule (GenBank): AIW00320.1
Assay category: TCell
Result: Positive-Low
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: P L Simon; V Kumar; J S Lillquist; P Bhatnagar; R Einstein; J Lee; T Porter; D Green; G Sathe; P R Young. "Mapping of neutralizing epitopes and the receptor binding site of human interleukin 1 beta." The Journal of biological chemistry (1993).

Epitope: IL-1beta 27-37
Chemical type: Peptide from protein
Sequence: KALHLQGQDME
Position: 143-153
Source molecule (GenBank): P01584.2
Assay category: BCell
Result: Negative

Epitope: IL-1beta 27-37
Chemical type: Peptide from protein
Sequence: KALHLQGQDME
Position: 143-153
Source molecule (GenBank): P01584.2
Assay category: BCell
Result: Positive

Epitope: IL-1beta 27-37
Chemical type: Peptide from protein
Sequence: KALHLQGQDME
Position: 143-153
Source molecule (GenBank): P01584.2
Assay category: BCell
Result: Positive

Epitope: IL-1beta 27-37
Chemical type: Peptide from protein
Sequence: KALHLQGQDME
Position: 143-153
Source molecule (GenBank): P01584.2
Assay category: BCell
Result: Negative

Epitope: IL-1beta 7-12
Chemical type: Peptide from protein
Sequence: NCTLRD
Position: 123-128
Source molecule (GenBank): P01584.2
Assay category: BCell
Result: Negative

Epitope: IL-1beta 8-13
Chemical type: Peptide from protein
Sequence: CTLRDS
Position: 124-129
Source molecule (GenBank): P01584.2
Assay category: BCell
Result: Negative
Reference: Christine Benz; Olaf Utermöhlen; Anna Wulf; Brigitte Villmow; Volker Dries; Tobias Goeser; Ulrich Koszinowski; Dirk H Busch. "Activated virus-specific T cells are early indicators of anti-CMV immune reactions in liver transplant patients." Gastroenterology (2002).

Epitope: pp65 123-131
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: pp65 123-131
Chemical type: Peptide from protein
Sequence: IPSINVHHY
Position: 123-131
Source molecule (GenBank): ADV04400.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo