LiteFold/IEDB huggingface dataset:
Reference: Elaheh Movahed; David J Vance; Dylan Ehrbar; Greta Van Slyke; Jennifer Yates; Karen Kullas; Michael Rudolph; Nicholas J Mantis. "Serological Analysis Identifies Consequential B Cell Epitopes on the Flexible Linker and C-Terminus of Decorin Binding Protein A (DbpA) from Borrelia burgdorferi." mSphere (2022).

Epitope: DbpA strain B31 A2
Chemical type: Peptide from protein
Sequence: VNLLISCGLTGATKIRLE
Position: 19-36
Source molecule (GenBank): O50917.1
Assay category: BCell
Result: Negative
Reference: Zhiyuan Mao; Pavlo A Nesterenko; Jami McLaughlin; Weixian Deng; Giselle Burton Sojo; Donghui Cheng; Miyako Noguchi; William Chour; Diana C DeLucia; Kathryn A Finton; Yu Qin; Matthew B Obusan; Wendy Tran; Liang Wang; Nathanael J Bangayan; Lisa Ta; Chia-Chun Chen; Christopher S Seet; Gay M Crooks; John W Phillips; James R Heath; Roland K Strong; John K Lee; James A Wohlschlegel; Owen N Witte. "Physical and in silico immunopeptidomic profiling of a cancer antigen prostatic acid phosphatase reveals targets enabling TCR isolation." Proceedings of the National Academy of Sciences of the United States of America (2022).

Epitope: PAP_A2_3
Chemical type: Peptide from protein
Sequence: LSELSLLSLYGIHK
Position: 238-251
Source molecule (GenBank): P15309.3
Assay category: MhcLigandElution
Result: Positive

Epitope: PAP_A2_3
Chemical type: Peptide from protein
Sequence: LSELSLLSLYGIHK
Position: 238-251
Source molecule (GenBank): P15309.3
Assay category: MhcBinding
Result: Negative

Epitope: PAP_A2_16
Chemical type: Peptide from protein
Sequence: DVYNGLLPPYA
Position: 301-311
Source molecule (GenBank): P15309.3
Assay category: MhcLigandElution
Result: Positive

Epitope: PAP_A2_16
Chemical type: Peptide from protein
Sequence: DVYNGLLPPYA
Position: 301-311
Source molecule (GenBank): P15309.3
Assay category: MhcBinding
Result: Negative

Epitope: PAP_A2_19
Chemical type: Peptide from protein
Sequence: IWSKVYDPLY
Position: 205-214
Source molecule (GenBank): P15309.3
Assay category: MhcLigandElution
Result: Positive

Epitope: PAP_A2_19
Chemical type: Peptide from protein
Sequence: IWSKVYDPLY
Position: 205-214
Source molecule (GenBank): P15309.3
Assay category: MhcBinding
Result: Negative

Epitope: PAP_A2_26
Chemical type: Peptide from protein
Sequence: RHGDRSPIDTFPTD
Position: 43-56
Source molecule (GenBank): P15309.3
Assay category: MhcLigandElution
Result: Positive

Epitope: PAP_A2_26
Chemical type: Peptide from protein
Sequence: RHGDRSPIDTFPTD
Position: 43-56
Source molecule (GenBank): P15309.3
Assay category: MhcBinding
Result: Negative
Reference: Corinna Grunert; Gerald Willimsky; Caroline Anna Peuker; Simone Rhein; Leo Hansmann; Thomas Blankenstein; Eric Blanc; Dieter Beule; Ulrich Keller; Antonio Pezzutto; Antonia Busse. "Isolation of Neoantigen-Specific Human T Cell Receptors from Different Human and Murine Repertoires." Cancers (2022).

Epitope: CDH2 D660Y
Chemical type: Peptide, no natural source
Sequence: RLNGYFAQL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CDH2 D660Y
Chemical type: Peptide, no natural source
Sequence: RLNGYFAQL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: CDH2 D660Y
Chemical type: Peptide, no natural source
Sequence: RLNGYFAQL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: TBC1D1 E299K
Chemical type: Peptide, no natural source
Sequence: MLFTIGQSKV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone

Epitope: TBC1D1 E299K
Chemical type: Peptide, no natural source
Sequence: MLFTIGQSKV
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Cell Line / Clone
Reference: Yong-Chen Lu; Zhili Zheng; Frank J Lowery; Jared J Gartner; Todd D Prickett; Paul F Robbins; Steven A Rosenberg. "Direct identification of neoantigen-specific TCRs from tumor specimens by high-throughput single-cell sequencing." Journal for immunotherapy of cancer (2021).

Epitope: NUF2 mut
Chemical type: Peptide, no natural source
Sequence: MEGFLPFSNLVTLLDSFLPICRVND
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: NUF2 mut
Chemical type: Peptide, no natural source
Sequence: MEGFLPFSNLVTLLDSFLPICRVND
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: TNRC18 Mut
Chemical type: Peptide, no natural source
Sequence: AQHHHSRAEEEATVVAASSSKKAYL
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: TNRC18 Mut
Chemical type: Peptide, no natural source
Sequence: AQHHHSRAEEEATVVAASSSKKAYL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered
Reference: Jiefei Han; Ruofei Yu; Jianchun Duan; Jin Li; Wei Zhao; Guoshuang Feng; Hua Bai; Yuqi Wang; Xue Zhang; Rui Wan; Jiachen Xu; Xin Wang; Yanfang Guan; Xuefeng Xia; Zhuoran Yao; Kailun Fei; David P Carbone; Zhijie Wang; Jie Wang. "Weighting tumor-specific TCR repertoires as a classifier to stratify the immunotherapy delivery in non-small cell lung cancers." Science advances (2021).

Epitope: MANA 3
Chemical type: Peptide, no natural source
Sequence: ARNDFVKEI
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Xiao Zhang; Junping Hong; Ling Zhong; Qian Wu; Shanshan Zhang; Qianying Zhu; Haiwen Chen; Dongmei Wei; Rui Li; Wanlin Zhang; Xinyu Zhang; Guosong Wang; Xiang Zhou; Junyu Chen; Yinfeng Kang; Zhenghui Zha; Xiaobing Duan; Yang Huang; Cong Sun; Xiangwei Kong; Yan Zhou; Yanhong Chen; Xiaoping Ye; Qisheng Feng; Shaowei Li; Tong Xiang; Song Gao; Mu-Sheng Zeng; Qingbing Zheng; Yixin Chen; Yi-Xin Zeng; Ningshao Xia; Miao Xu. "Protective anti-gB neutralizing antibodies targeting two vulnerable sites for EBV-cell membrane fusion." Proceedings of the National Academy of Sciences of the United States of America (2022).

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  38-64 years

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  10 weeks

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  38-64 years

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  10 weeks

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  10 weeks

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  10 weeks

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  10 weeks

Epitope: 3A3 epitope
Chemical type: Discontinuous protein residues
Discontinuous residues: E345, N348, K349, H352, E353, E356, A357, Q359, D360, R388, L390
Source molecule (GenBank): BAU51603.1
Assay category: BCell
Result: Positive
Host:  10 weeks
Reference: Andrew D Redd; Alessandra Nardin; Hassen Kared; Evan M Bloch; Brian Abel; Andrew Pekosz; Oliver Laeyendecker; Michael Fehlings; Thomas C Quinn; Aaron A R Tobian. "Minimal Crossover between Mutations Associated with Omicron Variant of SARS-CoV-2 and CD8<sup>+</sup> T-Cell Epitopes Identified in COVID-19 Convalescent Individuals." mBio (2022).

Epitope: Spike glycoprotein 1208-1216
Chemical type: Peptide from protein
Sequence: QYIKWPWYI
Position: 1208-1216
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: Spike glycoprotein 454-462
Chemical type: Peptide from protein
Sequence: RLFRKSNLK
Position: 454-462
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Xiao Yun; Meng-Si Li; Yiyu Chen; Fei Huan; Min-Jie Cao; Dong Lai; Gui-Xia Chen; Guang-Ming Liu. "Characterization, Epitope Identification, and Cross-reactivity Analysis of Tropomyosin: An Important Allergen of ." Journal of agricultural and food chemistry (2022).

Epitope: Tropomyosin P1
Chemical type: Peptide from protein
Sequence: KENAQDR
Position: 15-21
Source molecule (GenBank): UST29548.1
Assay category: BCell
Result: Positive-Low

Epitope: Tropomyosin P1
Chemical type: Peptide from protein
Sequence: KENAQDR
Position: 15-21
Source molecule (GenBank): UST29548.1
Assay category: BCell
Result: Positive
Host:  7-64 years
Reference: Savita Budania; Abhishek Dubey; Ajit Singh. "Trypanosoma evansi RoTat 1.2 variant surface antigen mimotopes selected by panning of the random peptide phage-display library against monoclonal antibodies." Journal of molecular recognition : JMR (2022).

Epitope: 2E11 mimotope 2
Chemical type: Peptide, no natural source
Sequence: WGYPHSWLWARS
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 2
Chemical type: Peptide, no natural source
Sequence: WGYPHSWLWARS
Assay category: BCell
Result: Positive

Epitope: 2E11 mimotope 2
Chemical type: Peptide, no natural source
Sequence: WGYPHSWLWARS
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 4
Chemical type: Peptide, no natural source
Sequence: EYHPVTTPISTH
Assay category: BCell
Result: Positive

Epitope: 1C2 mimotope 4
Chemical type: Peptide, no natural source
Sequence: EYHPVTTPISTH
Assay category: BCell
Result: Positive
Reference: Nai-Ru Ji; Xin-Yu Han; Chen-Chen Yu; Xin-Rong He; Shi-Tao Rao; Fei Huan; Hong Liu; Gui-Xia Chen; Min-Jie Cao; Guang-Ming Liu. "Identification of linear epitopes and their major role in the immunoglobulin E-binding capacity of tropomyosin from ." Food & function (2022).

Epitope: Tropomyosin P3
Chemical type: Peptide from protein
Sequence: EQEIQSLNR
Position: 82-90
Source molecule (GenBank): UTA91547.1
Assay category: BCell
Result: Positive
Host:  7-39 years

Epitope: Tropomyosin P3
Chemical type: Peptide from protein
Sequence: EQEIQSLNR
Position: 82-90
Source molecule (GenBank): UTA91547.1
Assay category: BCell
Result: Negative
Host:  15-38 years
Reference: L Sánchez-Ruano; C Fernández-Lozano; M Ferrer; F Gómez; B de la Hoz; J Martínez-Botas; M J Goikoetxea. "Differences in Linear Epitopes of Ara h 9 Recognition in Peanut Allergic and Tolerant, Peach Allergic Patients." Frontiers in allergy (2022).

Epitope: Pru p 3 peptide 8
Chemical type: Peptide from protein
Sequence: AVPPACCNGIRNVNNLARTT
Position: 22-41
Source molecule (GenBank): CAB96876.2
Assay category: BCell
Result: Positive
Host:  15-48 years

Epitope: Pru p 3 peptide 8
Chemical type: Peptide from protein
Sequence: AVPPACCNGIRNVNNLARTT
Position: 22-41
Source molecule (GenBank): CAB96876.2
Assay category: BCell
Result: Positive
Host:  15-48 years

Epitope: Ara h 9 peptide 14
Chemical type: Peptide from protein
Sequence: TTADRQAACNCLKAAAGSLR
Position: 64-83
Source molecule (GenBank): XP_025633971.1
Assay category: BCell
Result: Negative
Host:  15-48 years

Epitope: Ara h 9 peptide 14
Chemical type: Peptide from protein
Sequence: TTADRQAACNCLKAAAGSLR
Position: 64-83
Source molecule (GenBank): XP_025633971.1
Assay category: BCell
Result: Positive
Host:  18-45 years

Epitope: Ara h 9 peptide 14
Chemical type: Peptide from protein
Sequence: TTADRQAACNCLKAAAGSLR
Position: 64-83
Source molecule (GenBank): XP_025633971.1
Assay category: BCell
Result: Positive
Host:  15-48 years

Epitope: Ara h 9 peptide 14
Chemical type: Peptide from protein
Sequence: TTADRQAACNCLKAAAGSLR
Position: 64-83
Source molecule (GenBank): XP_025633971.1
Assay category: BCell
Result: Negative
Host:  18-45 years
Reference: David B Langley; Peter Schofield; Damien Nevoltris; Jennifer Jackson; Katherine J L Jackson; Tim J Peters; Melanie Burk; Jacqueline M Matthews; Antony Basten; Christopher C Goodnow; Sheryl van Nunen; Joanne H Reed; Daniel Christ. "Genetic and structural basis of the human anti-α-galactosyl antibody response." Proceedings of the National Academy of Sciences of the United States of America (2022).

Epitope: α-gal
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-gal
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Host:  17-71 years

Epitope: α-gal
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Host:  24-65 years

Epitope: α-gal
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive

Epitope: α-gal
Chemical type: Carbohydrate
Assay category: BCell
Result: Positive
Reference: Shijiang Mi; Lihua Wang; Hongwei Li; Fei Bao; Rachel Madera; Xiju Shi; Liying Zhang; Yingying Mao; Renhe Yan; Xianzhu Xia; Wenjie Gong; Jishu Shi; Changchun Tu. "Characterization of monoclonal antibodies that specifically differentiate field isolates from vaccine strains of classical swine fever virus." Frontiers in immunology (2022).

Epitope: CSFV-Erns 100, 107
Chemical type: Discontinuous protein residues
Discontinuous residues: D367, V374
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive

Epitope: CSFV-Erns 100, 107
Chemical type: Discontinuous protein residues
Discontinuous residues: D367, V374
Source molecule (GenBank): AAM95952.1
Assay category: BCell
Result: Positive
Reference: An-Ran Shen; Xiao-Xiao Jin; Tao-Tao Tang; Yan Ding; Xiao-Tao Liu; Xin Zhong; Yan-Dan Wu; Xue-Lian Han; Guang-Yu Zhao; Chuan-Lai Shen; Lin-Li Lv; Bi-Cheng Liu. "Exosomal Vaccine Loading T Cell Epitope Peptides of SARS-CoV-2 Induces Robust CD8<sup>+</sup> T Cell Response in HLA-A Transgenic Mice." International journal of nanomedicine (2022).

Epitope: B6
Chemical type: Peptide from protein
Sequence: TLACFVLAAV
Position: 61-70
Source molecule (GenBank): P0DTC5.1
Assay category: TCell
Result: Positive
Host: M 8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo

Epitope: D6
Chemical type: Peptide from protein
Sequence: RLDKVEAEV
Position: 983-991
Source molecule (GenBank): P0DTC2.1
Assay category: TCell
Result: Positive
Host: M 8 weeks
Cell type: splenocyte
Tissue: spleen
Culture conditions: Direct Ex Vivo
Reference: Sanja Stevanović; Anna Pasetto; Sarah R Helman; Jared J Gartner; Todd D Prickett; Bryan Howie; Harlan S Robins; Paul F Robbins; Christopher A Klebanoff; Steven A Rosenberg; Christian S Hinrichs. "Landscape of immunogenic tumor antigens in successful immunotherapy of virally induced epithelial cancer." Science (New York, N.Y.) (2017).

Epitope: TMG-1-1  CDC14A
Chemical type: Peptide, no natural source
Sequence: ALLSGSNPPYLPLRDASFGNCTYNL
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: uterine cervix
Culture conditions: Short Term Restimulated

Epitope: TMG-1-9  NDUFS2
Chemical type: Peptide, no natural source
Sequence: MYPSKETAHWKSPPWNDVDPPKDT
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: uterine cervix
Culture conditions: Short Term Restimulated

Epitope: TMG-5-1 FREM2
Chemical type: Peptide, no natural source
Sequence: EKTVLIIVIPVDYETPRMTINNGLE
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: uterine cervix
Culture conditions: Short Term Restimulated

Epitope: TMG-18-7  MUM1L1
Chemical type: Peptide, no natural source
Sequence: VSFSASNPVWDYLHLMSSERNFQRL
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: uterine cervix
Culture conditions: Short Term Restimulated

Epitope: TMG-18-10 MAGEB18
Chemical type: Peptide, no natural source
Sequence: DLGATQATVAEGQSPSSAYLLFGDR
Assay category: TCell
Result: Negative
Cell type: tumor infiltrating lymphocyte
Tissue: uterine cervix
Culture conditions: Short Term Restimulated

Epitope: HPV16 E6 (52-61)
Chemical type: Peptide from protein
Sequence: FAFRDLCIVY
Position: 52-61
Source molecule (GenBank): P03126
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E6 (52-61)
Chemical type: Peptide from protein
Sequence: FAFRDLCIVY
Position: 52-61
Source molecule (GenBank): P03126
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E6 (52-61)
Chemical type: Peptide from protein
Sequence: FAFRDLCIVY
Position: 52-61
Source molecule (GenBank): P03126
Assay category: TCell
Result: Positive
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E7 (73-84)
Chemical type: Peptide from protein
Sequence: HVDIRTLEDLLM
Position: 73-84
Source molecule (GenBank): P03129
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered

Epitope: HPV16 E7 (73-84)
Chemical type: Peptide from protein
Sequence: HVDIRTLEDLLM
Position: 73-84
Source molecule (GenBank): P03129
Assay category: TCell
Result: Positive
Cell type: T cell CD4+
Tissue: blood
Culture conditions: Engineered
Reference: Joost H van den Berg; Bianca Heemskerk; Nienke van Rooij; Raquel Gomez-Eerland; Samira Michels; Maaike van Zon; Renate de Boer; Noor A M Bakker; Annelies Jorritsma-Smit; Marit M van Buuren; Pia Kvistborg; Hergen Spits; Remko Schotte; Henk Mallo; Matthias Karger; Joris A van der Hage; Michel W J M Wouters; Loes M Pronk; Marnix H Geukes Foppen; Christian U Blank; Jos H Beijnen; Bastiaan Nuijen; Ton N Schumacher; John B A G Haanen. "Tumor infiltrating lymphocytes (TIL) therapy in metastatic melanoma: boosting of neoantigen-specific T cell reactivity and long-term follow-up." Journal for immunotherapy of cancer (2020).

Epitope: MAB21L1 V>M
Chemical type: Peptide, no natural source
Sequence: LRIRDRYVM
Assay category: TCell
Result: Positive
Host: F 44
Cell type: T cell CD8+
Tissue: skin
Culture conditions: Direct Ex Vivo
Reference: Di Wu; Yangyang Liu; Xiaoting Li; Yiying Liu; Qifan Yang; Yuting Liu; Jingjing Wu; Chen Tian; Yulan Zeng; Zhikun Zhao; Yajie Xiao; Feifei Gu; Kai Zhang; Yue Hu; Li Liu. "Identification of Clonal Neoantigens Derived From Driver Mutations in an -Mutated Lung Cancer Patient Benefitting From Anti-PD-1." Frontiers in immunology (2020).

Epitope: DENND6B wt C8
Chemical type: Peptide from protein
Sequence: KALLKRLLK
Position: 393-401
Source molecule (GenBank): Q8NEG7.1
Assay category: TCell
Result: Negative
Host: M 34 years
Cell type: PBMC
Tissue: blood
Culture conditions: Short Term Restimulated
Reference: Wei Yang; Ken-Wing Lee; Raghvendra M Srivastava; Fengshen Kuo; Chirag Krishna; Diego Chowell; Vladimir Makarov; Douglas Hoen; Martin G Dalin; Leonard Wexler; Ronald Ghossein; Nora Katabi; Zaineb Nadeem; Marc A Cohen; S Ken Tian; Nicolas Robine; Kanika Arora; Heather Geiger; Phaedra Agius; Nancy Bouvier; Kety Huberman; Katelynd Vanness; Jonathan J Havel; Jennifer S Sims; Robert M Samstein; Rajarsi Mandal; Justin Tepe; Ian Ganly; Alan L Ho; Nadeem Riaz; Richard J Wong; Neerav Shukla; Timothy A Chan; Luc G T Morris. "Immunogenic neoantigens derived from gene fusions stimulate T cell responses." Nature medicine (2019).

Epitope: SEPPKKTAK
Chemical type: Peptide, no natural source
Sequence: SEPPKKTAK
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EPPKKTAKR
Chemical type: Peptide from protein
Sequence: EPPKKTAKR
Position: 254-262
Source molecule (GenBank): H0Y993.2
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EDKESEEEV
Chemical type: Peptide, no natural source
Sequence: EDKESEEEV
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: EDKESEEEV
Chemical type: Peptide, no natural source
Sequence: EDKESEEEV
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LQFIDSSWTL
Chemical type: Peptide, no natural source
Sequence: LQFIDSSWTL
Assay category: TCell
Result: Negative
Cell type: T cell
Tissue: blood
Culture conditions: Direct Ex Vivo

Epitope: LQFIDSSWTL
Chemical type: Peptide, no natural source
Sequence: LQFIDSSWTL
Assay category: TCell
Result: Negative
Cell type: T cell CD8+
Tissue: blood
Culture conditions: Direct Ex Vivo
Reference: Nicholas McGranahan; Andrew J S Furness; Rachel Rosenthal; Sofie Ramskov; Rikke Lyngaa; Sunil Kumar Saini; Mariam Jamal-Hanjani; Gareth A Wilson; Nicolai J Birkbak; Crispin T Hiley; Thomas B K Watkins; Seema Shafi; Nirupa Murugaesu; Richard Mitter; Ayse U Akarca; Joseph Linares; Teresa Marafioti; Jake Y Henry; Eliezer M Van Allen; Diana Miao; Bastian Schilling; Dirk Schadendorf; Levi A Garraway; Vladimir Makarov; Naiyer A Rizvi; Alexandra Snyder; Matthew D Hellmann; Taha Merghoub; Jedd D Wolchok; Sachet A Shukla; Catherine J Wu; Karl S Peggs; Timothy A Chan; Sine R Hadrup; Sergio A Quezada; Charles Swanton. "Clonal neoantigens elicit T cell immunoreactivity and sensitivity to immune checkpoint blockade." Science (New York, N.Y.) (2016).

Epitope: CHTF18 wt
Chemical type: Peptide from protein
Sequence: LLDILAPK
Position: 765-772
Source molecule (GenBank): NP_071375.1
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Non-antigen specific activation

Epitope: MYADM R30W (SPMIVGSPWA)
Chemical type: Peptide, no natural source
Sequence: SPMIVGSPWA
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Non-antigen specific activation

Epitope: MYADM R30W (SPWALTQPLGL)
Chemical type: Peptide, no natural source
Sequence: SPWALTQPLGL
Assay category: TCell
Result: Negative
Host: F 69 years
Cell type: T cell CD8+
Tissue: lung
Culture conditions: Non-antigen specific activation