LiteFold/GO huggingface dataset:
obsolete protein-FMN linkage (GO:0018309)
Namespace: biological_process
Definition: OBSOLETE. The formation of a linkage between a protein amino acid and flavin mononucleotide (FMN).
Comment: This is a molecular function.
obsolete protein-FMN linkage via S-(6-FMN)-L-cysteine (GO:0018310)
Namespace: biological_process
Definition: OBSOLETE. The formation of a protein-FMN linkage via S-(6-FMN)-L-cysteine.
Comment: This is a molecular function.
obsolete peptidyl-N4-hydroxymethyl-L-asparagine biosynthetic process from peptidyl-asparagine (GO:0018311)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the formation of N4-hydroxymethyl-L-asparagine from other compounds, including peptidyl-asparagine.
Synonyms: peptidyl-N4-hydroxymethyl-L-asparagine anabolism from peptidyl-asparagine; peptidyl-N4-hydroxymethyl-L-asparagine formation from peptidyl-asparagine; peptidyl-N4-hydroxymethyl-L-asparagine synthesis from peptidyl-asparagine
Comment: This term was obsoleted because it represents a molecular function.
obsolete peptidyl-serine ADP-ribosylation (GO:0018312)
Namespace: biological_process
Definition: OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-serine to form peptidyl-O-(ADP-ribosyl)-L-serine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete peptide cross-linking via L-alanyl-5-imidazolinone glycine (GO:0018313)
Namespace: biological_process
Definition: OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.
Comment: This term was obsoleted because it represents a molecular function; however the enzyme responsible for this reaction has not been defined.
obsolete protein-pyrroloquinoline-quinone linkage (GO:0018314)
Namespace: biological_process
Definition: OBSOLETE. The covalent cross-linking of pyrroloquinoline-quinone to peptidyl-glutamic acid and peptidyl-tyrosine.
Synonyms: protein-pyrroloquinoline-quinone linkage
molybdenum incorporation into molybdenum-molybdopterin complex (GO:0018315)
Namespace: biological_process
Definition: The incorporation of molybdenum into a molybdenum-molybdopterin complex.
Synonyms: molybdenum incorporation into metallo-pterin complex
peptide cross-linking via L-cystine (GO:0018316)
Namespace: biological_process
Definition: The oxidation of two peptidyl-cysteine residues to form a peptidyl-L-cystine (dicysteine) in which segments of peptide chain are linked by a disulfide bond; the cross-link may be between different or the same peptide chain.
obsolete protein C-linked glycosylation via tryptophan (GO:0018317)
Namespace: biological_process
Definition: OBSOLETE. The glycosylation of a carbon atom of a peptidyl-tryptophan residue.
Synonyms: protein amino acid C-linked glycosylation via tryptophan
Comment: The reason for obsoletion is that this term represents a molecular function.
obsolete enzyme active site formation via S-methyl-L-cysteine (GO:0018320)
Namespace: biological_process
Definition: OBSOLETE. The transient methylation of peptidyl-cysteine to form S-methyl-L-cysteine.
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:21527678.
obsolete protein glucuronylation (GO:0018321)
Namespace: biological_process
Definition: OBSOLETE. The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.
Synonyms: protein amino acid glucuronylation
Comment: The reason for obsoletion is that this term represents a molecular function
obsolete protein tyrosinylation (GO:0018322)
Namespace: biological_process
Definition: OBSOLETE. The addition of a tyrosine molecule to a protein amino acid.
Synonyms: protein amino acid tyrosinylation
Comment: This term was obsoleted because it is a molecular function represented as a biological process.
obsolete enzyme active site formation via L-cysteine sulfinic acid (GO:0018323)
Namespace: biological_process
Definition: OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfinic acid.
Synonyms: enzyme active site formation via L-cysteine sulphinic acid
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:9586994.
obsolete enzyme active site formation via L-cysteine sulfenic acid (GO:0018324)
Namespace: biological_process
Definition: OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfenic acid, found in the active site of NADH peroxidase, nitrile hydratase, and peptide methionine sulfoxide reductase.
Synonyms: enzyme active site formation via L-cysteine sulphenic acid
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:10964927 and PMID:9587003.
obsolete enzyme active site formation via S-acetyl-L-cysteine (GO:0018326)
Namespace: biological_process
Definition: OBSOLETE. The transient acetylation of peptidyl-cysteine to form S-acetyl-L-cysteine.
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:1310545.
obsolete enzyme active site formation via 1'-phospho-L-histidine (GO:0018327)
Namespace: biological_process
Definition: OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine).
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:11038361.
obsolete enzyme active site formation via 3'-phospho-L-histidine (GO:0018328)
Namespace: biological_process
Definition: OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:11168390.
obsolete enzyme active site formation via N6-(phospho-5'-adenosine)-L-lysine (GO:0018329)
Namespace: biological_process
Definition: OBSOLETE. The transient adenylylation of lysine to form N6-(phospho-5'-adenosine)-L-lysine, found in the active site of DNA ligase and RNA ligase.
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:4944632 and and PMID:3882425.
obsolete enzyme active site formation via N6-(phospho-5'-guanosine)-L-lysine (GO:0018330)
Namespace: biological_process
Definition: OBSOLETE. The transient guanylylation of lysine to form N6-(phospho-5'-guanosine)-L-lysine, found in the guanylyltransferase active site of mRNA capping enzyme.
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:6092377.
obsolete enzyme active site formation via O-phospho-L-serine (GO:0018331)
Namespace: biological_process
Definition: OBSOLETE. The transient phosphorylation of peptidyl-serine to form O-phospho-L-serine.
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:8061611 and PMID:12923550.
obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (GO:0018332)
Namespace: biological_process
Definition: OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.
Comment: This term was obsoleted because it represents a reaction intermediate, not a biological process, see PMID:19039103 and PMID:19503829.
obsolete enzyme active site formation via O-phospho-L-threonine (GO:0018333)
Namespace: biological_process
Definition: OBSOLETE. The transient phosphorylation of peptidyl-threonine to form O-phospho-L-threonine.
Comment: This term was obsoleted because it was created by error: tyrosine phosphorylation does not generate an active site.
obsolete enzyme active site formation via O4'-phospho-L-tyrosine (GO:0018334)
Namespace: biological_process
Definition: OBSOLETE. The transient phosphorylation of peptidyl-tyrosine to form O-phospho-L-tyrosine.
Comment: This term was obsoleted because it was created by error: O4'-phospho-L-tyrosine is a post-translational modification, see PMID:1725475.
protein succinylation (GO:0018335)
Namespace: biological_process
Definition: The modification of a protein by the addition of a succinyl group (CO-CH2-CH2-CO) to an amino acid residue.
Synonyms: protein amino acid succinylation
peptidyl-tyrosine hydroxylation (GO:0018336)
Namespace: biological_process
Definition: The hydroxylation of peptidyl-tyrosine to form peptidyl-dihydroxyphenylalanine.
obsolete enzyme active site formation via L-2',4',5'-topaquinone (GO:0018337)
Namespace: biological_process
Definition: OBSOLETE. (Was not defined before being made obsolete).
Synonyms: enzyme active site formation via L-2',4',5'-topaquinone
Comment: This term was made obsolete because this process does not occur: the modification occurs before it can be an active site.
obsolete protein amino acid cinnamylation (GO:0018338)
Namespace: biological_process
Definition: OBSOLETE. The modification of a protein amino acid by cinnamylation.
Synonyms: protein amino acid cinnamylation
Comment: This term was made obsolete because it was an unnecessary grouping term. Consider GO:0018097 has been obsoleted.
peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid (GO:0018339)
Namespace: biological_process
Definition: The modification of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid, typical of bacterial ribosomal protein S12.
Synonyms: peptidyl-aspartic acid methylthiolation; peptidyl-L-beta-methylthioaspartic acid anabolism from peptidyl-aspartic acid; peptidyl-L-beta-methylthioaspartic acid formation from peptidyl-aspartic acid; peptidyl-L-beta-methylthioaspartic acid synthesis from peptidyl-aspartic acid
obsolete peptidyl-O-(sn-1-glycerophosphoryl)-L-serine biosynthetic process from peptidyl-serine (GO:0018340)
Namespace: biological_process
Definition: OBSOLETE. The modification of peptidyl-serine to peptidyl-O-(sn-1-glycerophosphoryl)-L-serine.
Synonyms: peptidyl-O-(sn-1-glycerophosphoryl)-L-serine anabolism from peptidyl-serine; peptidyl-O-(sn-1-glycerophosphoryl)-L-serine formation from peptidyl-serine; peptidyl-O-(sn-1-glycerophosphoryl)-L-serine synthesis from peptidyl-serine
Comment: This term was obsoleted because it represents a molecular function.
obsolete peptidyl-lysine modification to peptidyl-N6-pyruvic acid 2-iminyl-L-lysine (GO:0018341)
Namespace: biological_process
Definition: OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-pyruvic acid 2-iminyl-L-lysine.
Synonyms: peptidyl-N6-pyruvic acid 2-iminyl-L-lysine anabolism; peptidyl-N6-pyruvic acid 2-iminyl-L-lysine biosynthesis; peptidyl-N6-pyruvic acid 2-iminyl-L-lysine biosynthetic process; peptidyl-N6-pyruvic acid 2-iminyl-L-lysine formation; peptidyl-N6-pyruvic acid 2-iminyl-L-lysine synthesis
Comment: This term was obsoleted because it represents a molecular function.
protein prenylation (GO:0018342)
Namespace: biological_process
Definition: The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.
Synonyms: C-terminal protein prenylation; protein amino acid prenylation
protein farnesylation (GO:0018343)
Namespace: biological_process
Definition: The covalent attachment of a farnesyl group to a protein.
Synonyms: C-terminal protein farnesylation; protein amino acid farnesylation
protein geranylgeranylation (GO:0018344)
Namespace: biological_process
Definition: The covalent attachment of a geranylgeranyl group to a protein.
Synonyms: C-terminal protein geranylgeranylation; protein amino acid geranylgeranylation
protein palmitoylation (GO:0018345)
Namespace: biological_process
Definition: The covalent attachment of a palmitoyl group to a protein.
Synonyms: protein amino acid palmitoylation
obsolete protein esterification (GO:0018350)
Namespace: biological_process
Definition: OBSOLETE. The addition of an ester group to a protein amino acid.
Synonyms: protein amino acid esterification
Comment: This term was obsoleted because it represents a molecular function.
obsolete protein-phycocyanobilin linkage via S-phycocyanobilin-L-cysteine (GO:0018353)
Namespace: biological_process
Definition: OBSOLETE. The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin via S-phycocyanobilin-L-cysteine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine (GO:0018355)
Namespace: biological_process
Definition: OBSOLETE. The formation of a protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete protein-phycobiliviolin linkage via S-phycobiliviolin-L-cysteine (GO:0018356)
Namespace: biological_process
Definition: OBSOLETE. The linkage of the chromophore phycobiliviolin to phycoerythrocyanin via S-phycobiliviolin-L-cysteine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete protein-phytochromobilin linkage via S-phytochromobilin-L-cysteine (GO:0018358)
Namespace: biological_process
Definition: OBSOLETE. The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin via S-phytochromobilin-L-cysteine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete protein-heme P460 linkage via heme P460-bis-L-cysteine-L-tyrosine (GO:0018359)
Namespace: biological_process
Definition: OBSOLETE. The linkage of protein to heme P460 via heme P460-bis-L-cysteine-L-tyrosine.
Synonyms: protein-haem P460 linkage via haem P460-bis-L-cysteine-L-tyrosine
Comment: This term was obsoleted because it represents a molecular function.
obsolete protein-heme P460 linkage via heme P460-bis-L-cysteine-L-lysine (GO:0018360)
Namespace: biological_process
Definition: OBSOLETE. The linkage of protein to heme P460 via heme P460-bis-L-cysteine-L-lysine.
Synonyms: protein-haem P460 linkage via haem P460-bis-L-cysteine-L-lysine
Comment: This term was obsoleted because it represents a molecular function.
obsolete peptidyl-glutamine 2-methylation (GO:0018361)
Namespace: biological_process
Definition: OBSOLETE. The methylation of glutamine to form 2-methyl-L-glutamine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester (GO:0018362)
Namespace: biological_process
Definition: OBSOLETE. The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester.
Synonyms: peroxidase-haem linkage via dihydroxyhaem-L-aspartyl ester-L-glutamyl ester
Comment: This term was obsoleted because it represents a molecular function.
obsolete peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium (GO:0018363)
Namespace: biological_process
Definition: OBSOLETE. The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium.
Synonyms: peroxidase-haem linkage via dihydroxyhaem-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium; peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulphonium
Comment: This term was obsoleted because it represents a molecular function.
peptidyl-glutamine methylation (GO:0018364)
Namespace: biological_process
Definition: The addition of a methyl group to a glutamine residue in a protein.
protein-serine epimerase activity (GO:0018365)
Namespace: molecular_function
Definition: Catalysis of the reaction: (protein)-L-serine = (protein)-D-serine.
Synonyms: protein-serine racemase activity
obsolete chiral amino acid racemization (GO:0018366)
Namespace: biological_process
Definition: OBSOLETE. The formation of a mixture of the two possible enantiomers from the D- or L-enantiomer of a chiral amino acid.
Comment: The reason for obsoletion is that this term represents a molecular function.
obsolete free L-amino acid racemization (GO:0018367)
Namespace: biological_process
Definition: OBSOLETE. (Was not defined before being made obsolete).
Synonyms: free L-amino acid racemization
Comment: This term was made obsolete because it is not clear that this process occurs.
obsolete peptidyl-asparagine hydroxylation to form L-erythro-beta-hydroxyasparagine (GO:0018376)
Namespace: biological_process
Definition: OBSOLETE. The hydroxylation of peptidyl-asparagine to form peptidyl-L-erythro-beta-hydroxyasparagine; catalyzed by peptide-aspartate beta-dioxygenase (EC:1.14.11.16).
Comment: This term was obsoleted because it represents a molecular function.
protein myristoylation (GO:0018377)
Namespace: biological_process
Definition: The covalent attachment of a myristoyl group to a protein.
Synonyms: protein amino acid myristoylation
obsolete cytochrome c-heme linkage via heme-L-cysteine (GO:0018378)
Namespace: biological_process
Definition: OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-L-cysteine.
Synonyms: cytochrome c-haem linkage via haem-L-cysteine
Comment: This term was obsoleted because it represents a molecular function.
obsolete N-terminal peptidyl-cysteine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-cysteine (GO:0018386)
Namespace: biological_process
Definition: OBSOLETE. The condensation of pyruvate through the 2-oxo group with the N-terminal cysteine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-cysteine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete N-terminal peptidyl-amino acid deamination to pyruvic acid (GO:0018387)
Namespace: biological_process
Definition: OBSOLETE. The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.
Comment: This term was obsoleted because it represents a molecular function.
obsolete N-terminal peptidyl-valine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-valine (GO:0018388)
Namespace: biological_process
Definition: OBSOLETE. The condensation of pyruvate through the 2-oxo group with the N-terminal valine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-valine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete N-terminal peptidyl-valine deamination (GO:0018389)
Namespace: biological_process
Definition: OBSOLETE. The deamination of the N-terminal valine residue of a protein to form isobutyrate.
Comment: This term was obsoleted because it represents a molecular function.
obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine (GO:0018390)
Namespace: biological_process
Definition: OBSOLETE. The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.
Synonyms: peptidyl-L-glutamic acid 5-methyl ester anabolism from peptidyl-glutamic acid or peptidyl-glutamine; peptidyl-L-glutamic acid 5-methyl ester formation from peptidyl-glutamic acid or peptidyl-glutamine; peptidyl-L-glutamic acid 5-methyl ester synthesis from peptidyl-glutamic acid or peptidyl-glutamine
Comment: This term was obsoleted because it represents a molecular function.
obsolete C-terminal peptidyl-glutamic acid tyrosinylation (GO:0018391)
Namespace: biological_process
Definition: OBSOLETE. The ATP-dependent addition of a tyrosine residue to a glutamic acid residue at the C-terminus of a protein.
Comment: This term was obsoleted because it is a molecular function represented as a biological process.
glycoprotein 3-alpha-L-fucosyltransferase activity (GO:0018392)
Namespace: molecular_function
Definition: Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H+.
Synonyms: GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fuc-alpha-1->6-GlcNAc)-Asn-peptide) alpha-1->3-fucosyltransferase activity; GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6-GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity; GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity; GDP-L-Fuc:Asn-linked GlcNAc alpha-1,3-fucosyltransferase activity; GDP-L-Fuc:Asn-linked GlcNAc alpha1,3-fucosyltransferase activity; GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase activity; GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,3-fucosyltransferase activity; GDP-L-fucose:asparagine-linked N-acetylglucosamine alpha(1,3)-fucosyltransferase activity; GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of 4-N-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity; GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of N4-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity
peptidyl-lysine acetylation (GO:0018394)
Namespace: biological_process
Definition: The acetylation of peptidyl-lysine.
peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine (GO:0018395)
Namespace: biological_process
Definition: The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.
obsolete peptidyl-lysine hydroxylation to 4-hydroxy-L-lysine (GO:0018396)
Namespace: biological_process
Definition: OBSOLETE. The hydroxylation of peptidyl-lysine to peptidyl-4-hydroxy-L-lysine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete peptidyl-phenylalanine bromination to L-3'-bromophenylalanine (GO:0018398)
Namespace: biological_process
Definition: OBSOLETE. The bromination of peptidyl-phenylalanine to form L-3'-bromophenylalanine.
obsolete peptidyl-phenylalanine bromination to L-4'-bromophenylalanine (GO:0018399)
Namespace: biological_process
Definition: OBSOLETE. The bromination of peptidyl-phenylalanine to form L-4'-bromophenylalanine.
peptidyl-proline hydroxylation to 3-hydroxy-L-proline (GO:0018400)
Namespace: biological_process
Definition: The modification of peptidyl-proline to form 3-hydroxy-L-proline; catalyzed by procollagen-proline 3-dioxygenase.
Comment: See also the molecular function term 'procollagen-proline 3-dioxygenase activity ; GO:0019797'.
peptidyl-proline hydroxylation to 4-hydroxy-L-proline (GO:0018401)
Namespace: biological_process
Definition: The modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase.
Comment: See also the molecular function term 'procollagen-proline 4-dioxygenase activity ; GO:0004656'.
obsolete protein-dermatan sulfate linkage via dermatan 4-sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine (GO:0018403)
Namespace: biological_process
Definition: OBSOLETE. Dermatan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.
Synonyms: protein-dermatan sulphate linkage via dermatan 4-sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine
Comment: This term was obsoleted because it represents a molecular function.