LiteFold/GO huggingface dataset:
negative regulation of phenazine biosynthetic process (GO:1900981)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of phenazine biosynthetic process.
Synonyms: down regulation of acridizine biosynthesis; down regulation of acridizine biosynthetic process; down regulation of azophenylene biosynthesis; down regulation of azophenylene biosynthetic process; down regulation of dibenzo-p-diazine biosynthesis; down regulation of dibenzo-p-diazine biosynthetic process; down regulation of dibenzopyrazine biosynthesis; down regulation of dibenzopyrazine biosynthetic process; down regulation of phenazine biosynthetic process; down-regulation of acridizine biosynthesis; down-regulation of acridizine biosynthetic process; down-regulation of azophenylene biosynthesis; down-regulation of azophenylene biosynthetic process; down-regulation of dibenzo-p-diazine biosynthesis; down-regulation of dibenzo-p-diazine biosynthetic process; down-regulation of dibenzopyrazine biosynthesis; down-regulation of dibenzopyrazine biosynthetic process; down-regulation of phenazine biosynthetic process; downregulation of acridizine biosynthesis; downregulation of acridizine biosynthetic process; downregulation of azophenylene biosynthesis; downregulation of azophenylene biosynthetic process; downregulation of dibenzo-p-diazine biosynthesis; downregulation of dibenzo-p-diazine biosynthetic process; downregulation of dibenzopyrazine biosynthesis; downregulation of dibenzopyrazine biosynthetic process; downregulation of phenazine biosynthetic process; inhibition of acridizine biosynthesis; inhibition of acridizine biosynthetic process; inhibition of azophenylene biosynthesis; inhibition of azophenylene biosynthetic process; inhibition of dibenzo-p-diazine biosynthesis; inhibition of dibenzo-p-diazine biosynthetic process; inhibition of dibenzopyrazine biosynthesis; inhibition of dibenzopyrazine biosynthetic process; inhibition of phenazine biosynthetic process; negative regulation of acridizine biosynthesis; negative regulation of acridizine biosynthetic process; negative regulation of azophenylene biosynthesis; negative regulation of azophenylene biosynthetic process; negative regulation of dibenzo-p-diazine biosynthesis; negative regulation of dibenzo-p-diazine biosynthetic process; negative regulation of dibenzopyrazine biosynthesis; negative regulation of dibenzopyrazine biosynthetic process
positive regulation of phenazine biosynthetic process (GO:1900982)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.
Synonyms: activation of acridizine biosynthesis; activation of acridizine biosynthetic process; activation of azophenylene biosynthesis; activation of azophenylene biosynthetic process; activation of dibenzo-p-diazine biosynthesis; activation of dibenzo-p-diazine biosynthetic process; activation of dibenzopyrazine biosynthesis; activation of dibenzopyrazine biosynthetic process; activation of phenazine biosynthetic process; positive regulation of acridizine biosynthesis; positive regulation of acridizine biosynthetic process; positive regulation of azophenylene biosynthesis; positive regulation of azophenylene biosynthetic process; positive regulation of dibenzo-p-diazine biosynthesis; positive regulation of dibenzo-p-diazine biosynthetic process; positive regulation of dibenzopyrazine biosynthesis; positive regulation of dibenzopyrazine biosynthetic process; up regulation of acridizine biosynthesis; up regulation of acridizine biosynthetic process; up regulation of azophenylene biosynthesis; up regulation of azophenylene biosynthetic process; up regulation of dibenzo-p-diazine biosynthesis; up regulation of dibenzo-p-diazine biosynthetic process; up regulation of dibenzopyrazine biosynthesis; up regulation of dibenzopyrazine biosynthetic process; up regulation of phenazine biosynthetic process; up-regulation of acridizine biosynthesis; up-regulation of acridizine biosynthetic process; up-regulation of azophenylene biosynthesis; up-regulation of azophenylene biosynthetic process; up-regulation of dibenzo-p-diazine biosynthesis; up-regulation of dibenzo-p-diazine biosynthetic process; up-regulation of dibenzopyrazine biosynthesis; up-regulation of dibenzopyrazine biosynthetic process; up-regulation of phenazine biosynthetic process; upregulation of acridizine biosynthesis; upregulation of acridizine biosynthetic process; upregulation of azophenylene biosynthesis; upregulation of azophenylene biosynthetic process; upregulation of dibenzo-p-diazine biosynthesis; upregulation of dibenzo-p-diazine biosynthetic process; upregulation of dibenzopyrazine biosynthesis; upregulation of dibenzopyrazine biosynthetic process; upregulation of phenazine biosynthetic process
obsolete vindoline metabolic process (GO:1900983)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving vindoline.
Synonyms: vindoline metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete vindoline catabolic process (GO:1900984)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.
Synonyms: vindoline breakdown; vindoline catabolism; vindoline degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
vindoline biosynthetic process (GO:1900985)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of vindoline.
Synonyms: vindoline anabolism; vindoline biosynthesis; vindoline formation; vindoline synthesis
obsolete ajmaline catabolic process (GO:1900987)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ajmaline.
Synonyms: ajmaline breakdown; ajmaline catabolism; ajmaline degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
ajmaline biosynthetic process (GO:1900988)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of ajmaline.
Synonyms: ajmaline anabolism; ajmaline biosynthesis; ajmaline formation; ajmaline metabolic process; ajmaline metabolism; ajmaline synthesis
obsolete scopolamine catabolic process (GO:1900990)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of scopolamine.
Synonyms: scopolamine breakdown; scopolamine catabolism; scopolamine degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
obsolete (-)-secologanin metabolic process (GO:1900992)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving (-)-secologanin.
Synonyms: (-)-secologanin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete (-)-secologanin catabolic process (GO:1900993)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.
Synonyms: (-)-secologanin breakdown; (-)-secologanin catabolism; (-)-secologanin degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
(-)-secologanin biosynthetic process (GO:1900994)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of (-)-secologanin.
Synonyms: (-)-secologanin anabolism; (-)-secologanin biosynthesis; (-)-secologanin formation; (-)-secologanin synthesis
ubiquinone-6 binding (GO:1900995)
Namespace: molecular_function
Definition: Binding to ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.
benzene catabolic process (GO:1900996)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of benzene.
Synonyms: benzene breakdown; benzene catabolism; benzene degradation
benzene biosynthetic process (GO:1900997)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of benzene.
Synonyms: benzene anabolism; benzene biosynthesis; benzene formation; benzene synthesis
nitrobenzene catabolic process (GO:1900998)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of nitrobenzene.
Synonyms: nitrobenzene breakdown; nitrobenzene catabolism; nitrobenzene degradation
nitrobenzene biosynthetic process (GO:1900999)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of nitrobenzene.
Synonyms: nitrobenzene anabolism; nitrobenzene biosynthesis; nitrobenzene formation; nitrobenzene synthesis
regulation of response to salt stress (GO:1901000)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of response to salt stress.
Synonyms: regulation of response to ionic osmotic stress; regulation of salinity response
negative regulation of response to salt stress (GO:1901001)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of response to salt stress.
Synonyms: down regulation of response to ionic osmotic stress; down regulation of response to salt stress; down regulation of salinity response; down-regulation of response to ionic osmotic stress; down-regulation of response to salt stress; down-regulation of salinity response; downregulation of response to ionic osmotic stress; downregulation of response to salt stress; downregulation of salinity response; inhibition of response to ionic osmotic stress; inhibition of response to salt stress; inhibition of salinity response; negative regulation of response to ionic osmotic stress; negative regulation of salinity response
positive regulation of response to salt stress (GO:1901002)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of response to salt stress.
Synonyms: activation of response to ionic osmotic stress; activation of response to salt stress; activation of salinity response; positive regulation of response to ionic osmotic stress; positive regulation of salinity response; up regulation of response to ionic osmotic stress; up regulation of response to salt stress; up regulation of salinity response; up-regulation of response to ionic osmotic stress; up-regulation of response to salt stress; up-regulation of salinity response; upregulation of response to ionic osmotic stress; upregulation of response to salt stress; upregulation of salinity response
negative regulation of fermentation (GO:1901003)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.
Synonyms: down regulation of fermentation; down-regulation of fermentation; downregulation of fermentation; inhibition of fermentation
obsolete ubiquinone-6 metabolic process (GO:1901004)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.
Synonyms: coenzyme Q6 metabolic process; coenzyme Q6 metabolism; ubiquinone-6 metabolism
Comment: The reason for obsoletion is that the data from the paper for which the term was requested can be accurately described using ubiquinone metabolic process.
obsolete ubiquinone-6 catabolic process (GO:1901005)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ubiquinone-6.
Synonyms: ubiquinone-6 breakdown; ubiquinone-6 catabolism; ubiquinone-6 degradation
Comment: The reason for obsoletion is that the data from the paper for which the term was requested can be accurately described using ubiquinone catabolic process.
obsolete (S)-scoulerine catabolic process (GO:1901008)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (S)-scoulerine.
Synonyms: (S)-scoulerine breakdown; (S)-scoulerine catabolism; (S)-scoulerine degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
(S)-scoulerine biosynthetic process (GO:1901009)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of (S)-scoulerine.
Synonyms: (S)-scoulerine anabolism; (S)-scoulerine biosynthesis; (S)-scoulerine formation; (S)-scoulerine synthesis
obsolete (S)-reticuline metabolic process (GO:1901010)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving (S)-reticuline.
Synonyms: (S)-reticuline metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete (S)-reticuline catabolic process (GO:1901011)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (S)-reticuline.
Synonyms: (S)-reticuline breakdown; (S)-reticuline catabolism; (S)-reticuline degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
(S)-reticuline biosynthetic process (GO:1901012)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of (S)-reticuline.
Synonyms: (S)-reticuline anabolism; (S)-reticuline biosynthesis; (S)-reticuline formation; (S)-reticuline synthesis
obsolete regulation of potassium ion transmembrane transporter activity (GO:1901016)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity.
Synonyms: regulation of potassium transporter activity
Comment: This term was obsoleted because it represents a molecular function. Consider molecular function regulator activity ; GO:0098772 or a child.
negative regulation of potassium ion transmembrane transporter activity (GO:1901017)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.
Synonyms: down regulation of potassium ion transmembrane transporter activity; down regulation of potassium transporter activity; down-regulation of potassium ion transmembrane transporter activity; down-regulation of potassium transporter activity; downregulation of potassium ion transmembrane transporter activity; downregulation of potassium transporter activity; inhibition of potassium ion transmembrane transporter activity; inhibition of potassium transporter activity; negative regulation of potassium transporter activity
obsolete regulation of calcium ion transmembrane transporter activity (GO:1901019)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of calcium ion transmembrane transporter activity.
Comment: This term was obsoleted because it represents a molecular function.
negative regulation of calcium ion transmembrane transporter activity (GO:1901020)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion transmembrane transporter activity.
Synonyms: down regulation of calcium ion transmembrane transporter activity; down-regulation of calcium ion transmembrane transporter activity; downregulation of calcium ion transmembrane transporter activity; inhibition of calcium ion transmembrane transporter activity
obsolete positive regulation of calcium ion transmembrane transporter activity (GO:1901021)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transporter activity.
Synonyms: activation of calcium ion transmembrane transporter activity; up regulation of calcium ion transmembrane transporter activity; up-regulation of calcium ion transmembrane transporter activity; upregulation of calcium ion transmembrane transporter activity
Comment: This term was obsoleted because it represents a molecular function.
4-hydroxyphenylacetate metabolic process (GO:1901022)
Namespace: biological_process
Definition: The chemical reactions and pathways involving 4-hydroxyphenylacetate.
Synonyms: 4-hydroxyphenylacetate metabolism
4-hydroxyphenylacetate catabolic process (GO:1901023)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of 4-hydroxyphenylacetate.
Synonyms: 4-hydroxyphenylacetate breakdown; 4-hydroxyphenylacetate catabolism; 4-hydroxyphenylacetate degradation
4-hydroxyphenylacetate biosynthetic process (GO:1901024)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 4-hydroxyphenylacetate.
Synonyms: 4-hydroxyphenylacetate anabolism; 4-hydroxyphenylacetate biosynthesis; 4-hydroxyphenylacetate formation; 4-hydroxyphenylacetate synthesis
obsolete ripoptosome assembly involved in extrinsic apoptotic signaling pathway (GO:1901025)
Namespace: biological_process
Definition: OBSOLETE. The aggregation, arrangement and bonding together of ripoptosome components leading to apoptosis via the extrinsic apoptotic signaling pathway.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
ripoptosome assembly involved in necroptotic process (GO:1901026)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of ripoptosome components leading to a necroptotic process.
Synonyms: ripoptosome assembly involved in necroptosis
regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (GO:1901028)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.
Synonyms: regulation of mitochondrial outer membrane permeabilization; regulation of MOMP
negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (GO:1901029)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.
Synonyms: down regulation of mitochondrial outer membrane permeabilization; down regulation of MOMP; down-regulation of mitochondrial outer membrane permeabilization; down-regulation of MOMP; downregulation of mitochondrial outer membrane permeabilization; downregulation of MOMP; inhibition of mitochondrial outer membrane permeabilization; inhibition of MOMP; negative regulation of mitochondrial outer membrane permeabilization; negative regulation of MOMP
positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (GO:1901030)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.
Synonyms: activation of mitochondrial outer membrane permeabilization; activation of MOMP; positive regulation of mitochondrial outer membrane permeabilization; positive regulation of MOMP; up regulation of mitochondrial outer membrane permeabilization; up regulation of MOMP; up-regulation of mitochondrial outer membrane permeabilization; up-regulation of MOMP; upregulation of mitochondrial outer membrane permeabilization; upregulation of MOMP
Comment: Caspase 8 may be annotated to this term when it is shown to stimulate MOMP by cleaving the BH3-only protein BID.
negative regulation of response to reactive oxygen species (GO:1901032)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.
Synonyms: down regulation of response to active oxygen species; down regulation of response to AOS; down regulation of response to reactive oxidative species; down regulation of response to reactive oxygen intermediate; down regulation of response to reactive oxygen species; down regulation of response to ROI; down regulation of response to ROS; down-regulation of response to active oxygen species; down-regulation of response to AOS; down-regulation of response to reactive oxidative species; down-regulation of response to reactive oxygen intermediate; down-regulation of response to reactive oxygen species; down-regulation of response to ROI; down-regulation of response to ROS; downregulation of response to active oxygen species; downregulation of response to AOS; downregulation of response to reactive oxidative species; downregulation of response to reactive oxygen intermediate; downregulation of response to reactive oxygen species; downregulation of response to ROI; downregulation of response to ROS; inhibition of response to active oxygen species; inhibition of response to AOS; inhibition of response to reactive oxidative species; inhibition of response to reactive oxygen intermediate; inhibition of response to reactive oxygen species; inhibition of response to ROI; inhibition of response to ROS; negative regulation of response to active oxygen species; negative regulation of response to AOS; negative regulation of response to reactive oxidative species; negative regulation of response to reactive oxygen intermediate; negative regulation of response to ROI; negative regulation of response to ROS
positive regulation of response to reactive oxygen species (GO:1901033)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of response to reactive oxygen species.
Synonyms: activation of response to active oxygen species; activation of response to AOS; activation of response to reactive oxidative species; activation of response to reactive oxygen intermediate; activation of response to reactive oxygen species; activation of response to ROI; activation of response to ROS; positive regulation of response to active oxygen species; positive regulation of response to AOS; positive regulation of response to reactive oxidative species; positive regulation of response to reactive oxygen intermediate; positive regulation of response to ROI; positive regulation of response to ROS; up regulation of response to active oxygen species; up regulation of response to AOS; up regulation of response to reactive oxidative species; up regulation of response to reactive oxygen intermediate; up regulation of response to reactive oxygen species; up regulation of response to ROI; up regulation of response to ROS; up-regulation of response to active oxygen species; up-regulation of response to AOS; up-regulation of response to reactive oxidative species; up-regulation of response to reactive oxygen intermediate; up-regulation of response to reactive oxygen species; up-regulation of response to ROI; up-regulation of response to ROS; upregulation of response to active oxygen species; upregulation of response to AOS; upregulation of response to reactive oxidative species; upregulation of response to reactive oxygen intermediate; upregulation of response to reactive oxygen species; upregulation of response to ROI; upregulation of response to ROS
negative regulation of L-glutamine import across plasma membrane (GO:1901035)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamine import into a cell.
Synonyms: down regulation of L-glutamine import; down regulation of L-glutamine uptake; down-regulation of L-glutamine import; down-regulation of L-glutamine uptake; downregulation of L-glutamine import; downregulation of L-glutamine uptake; inhibition of L-glutamine import; inhibition of L-glutamine uptake; negative regulation of L-glutamine import; negative regulation of L-glutamine uptake