LiteFold/GO huggingface dataset:
cellular response to 1-aminocyclopropane-1-carboxylic acid (GO:0071213)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-aminocyclopropane-1-carboxylic acid stimulus.
cellular response to abiotic stimulus (GO:0071214)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus.
Synonyms: cellular response to abiotic stress
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
cellular response to abscisic acid stimulus (GO:0071215)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
cellular response to biotic stimulus (GO:0071216)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Synonyms: cellular response to biotic stress
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
cellular response to external biotic stimulus (GO:0071217)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.
cellular response to misfolded protein (GO:0071218)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.
cellular response to molecule of bacterial origin (GO:0071219)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
Synonyms: cellular response to bacteria associated molecule; cellular response to bacterial associated molecule; cellular response to bacterium associated molecule
cellular response to bacterial lipoprotein (GO:0071220)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.
cellular response to bacterial lipopeptide (GO:0071221)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipopeptide stimulus.
cellular response to lipopolysaccharide (GO:0071222)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms: cellular response to endotoxin; cellular response to LPS
cellular response to lipoteichoic acid (GO:0071223)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoteichoic acid stimulus; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.
Synonyms: cellular response to LTA
cellular response to peptidoglycan (GO:0071224)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.
cellular response to muramyl dipeptide (GO:0071225)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan.
cellular response to molecule of fungal origin (GO:0071226)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octamer oligosaccharide.
Synonyms: cellular response to fungus associated molecule
cellular response to molecule of oomycetes origin (GO:0071227)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of oomycetes origin.
Synonyms: cellular response to oomycetes associated molecule
cellular response to acid chemical (GO:0071229)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.
Synonyms: cellular response to acid; cellular response to acid anion; cellular response to oxoanion
Comment: This term should be used to describe a response to a specific acid as a chemical. E.g., if a cell were responding to glutamate, then the response would be glutamate-specific; the cell is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0071468 'cellular response to acidic pH' instead.
cellular response to amino acid stimulus (GO:0071230)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.
Synonyms: cellular response to amino acid
cellular response to folic acid (GO:0071231)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.
Synonyms: response to folate; response to vitamin B9
cellular response to histidine (GO:0071232)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.
cellular response to L-leucine (GO:0071233)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-leucine stimulus.
Synonyms: cellular response to leucine
cellular response to phenylalanine (GO:0071234)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.
cellular response to proline (GO:0071235)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a proline stimulus.
cellular response to antibiotic (GO:0071236)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
cellular response to bacteriocin (GO:0071237)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacteriocin stimulus. A bacteriocin is a protein substance released by certain bacteria that kills but does not lyse closely related strains of bacteria. Specific bacteriocins attach to specific receptors on cell walls and induce specific metabolic block, e.g. cessation of nucleic acid or protein synthesis of oxidative phosphorylation.
cellular response to brefeldin A (GO:0071238)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.
cellular response to streptomycin (GO:0071239)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.
cellular response to food (GO:0071240)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.
obsolete cellular response to inorganic substance (GO:0071241)
Namespace: biological_process
Definition: OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.
Comment: The reason for obsoletion is that this term is an unnecessary grouping term.
cellular response to ammonium ion (GO:0071242)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus.
Synonyms: cellular response to ammonia
cellular response to arsenic-containing substance (GO:0071243)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
Synonyms: cellular response to arsenic
cellular response to carbon dioxide (GO:0071244)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.
cellular response to carbon monoxide (GO:0071245)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon monoxide (CO) stimulus.
cellular response to chromate (GO:0071247)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.
cellular response to metal ion (GO:0071248)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
Synonyms: cellular response to heavy metal; cellular response to metal
cellular response to nitrite (GO:0071250)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrite stimulus.
cellular response to silicon dioxide (GO:0071251)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silicon dioxide stimulus.
Synonyms: cellular response to silica; cellular response to silox
cellular response to sulfur dioxide (GO:0071252)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sulfur dioxide (SO2) stimulus.
connexin binding (GO:0071253)
Namespace: molecular_function
Definition: Binding to a connexin, any of a group of related proteins that assemble to form gap junctions.
Cvt vesicle assembly (GO:0071255)
Namespace: biological_process
Definition: A vesicle organization process that takes place as part of the Cvt pathway, and results in the formation of a double membrane-bounded cytosolic structure that sequesters precursor aminopeptidase I (prAPI).
Synonyms: Cvt vesicle biosynthesis; Cvt vesicle formation; cytoplasm to vacuole targeting vesicle assembly; cytoplasm-to-vacuole targetin vesicle assembly
cellular response to electrical stimulus (GO:0071257)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.
Synonyms: cellular response to electricity
cellular response to gravity (GO:0071258)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.
Synonyms: cellular response to gravitational stimulus
cellular response to magnetism (GO:0071259)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.
Synonyms: cellular response to magnetic stimulus
cellular response to mechanical stimulus (GO:0071260)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
Synonyms: cellular mechanical stimulus response
Ssh1 translocon complex (GO:0071261)
Namespace: cellular_component
Definition: A translocon complex that contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Ssh1p, Sbh2p, and Sss1p. The Ssh1 translocon complex is involved in the cotranslational pathway of protein transport across the ER membrane, and recognizes proteins bearing strongly hydrophobic signal sequences.
Synonyms: Ssh1p-Sss1p-Sbh2p complex
regulation of translational initiation in response to starvation (GO:0071262)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.
Synonyms: regulation of translational initiation in response to nutrient starvation
negative regulation of translational initiation in response to starvation (GO:0071263)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the rate of translation initiation, as a result of deprivation of nourishment.
Synonyms: down regulation of translation initiation in response to starvation; down-regulation of translation initiation in response to starvation; downregulation of translation initiation in response to starvation; inhibition of translation initiation in response to starvation; negative regulation of translational initiation in response to nutrient starvation
positive regulation of translational initiation in response to starvation (GO:0071264)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.
Synonyms: activation of translation initiation in response to starvation; positive regulation of translational initiation in response to nutrient starvation; stimulation of translation initiation in response to starvation; up regulation of translation initiation in response to starvation; up-regulation of translation initiation in response to starvation; upregulation of translation initiation in response to starvation
'de novo' L-methionine biosynthetic process (GO:0071266)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components such as L-aspartate or L-homoserine. This process occurs in plants, bacteria, archae and fungi.
Synonyms: 'de novo' L-methionine anabolism; 'de novo' L-methionine biosynthesis; 'de novo' L-methionine formation; 'de novo' L-methionine synthesis
L-methionine salvage (GO:0071267)
Namespace: biological_process
Definition: Any process that generates L-methionine from derivatives of it, without de novo synthesis.
Synonyms: L-methionine salvage cycle
Comment: For the 'L-methionine cycle' (aka the 'S-adenosylmethionine cycle'), see GO:0033353.
obsolete homocysteine biosynthetic process (GO:0071268)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the formation of homocysteine, 2-amino-4-sulfanylbutanoic acid.
Synonyms: homocysteine anabolism; homocysteine biosynthesis; homocysteine formation; homocysteine synthesis
Comment: The reason for obsoletion is that more specific terms were created.
L-homocysteine biosynthetic process (GO:0071269)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of L-homocysteine.
Synonyms: L-homocysteine anabolism; L-homocysteine biosynthesis; L-homocysteine formation; L-homocysteine synthesis
obsolete 1-butanol metabolic process (GO:0071270)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving 1-butanol, an alkyl primary alcohol with the formula C4H10O.
Synonyms: 1-butanol metabolism; butan-1-ol metabolic process; butanol metabolic process
Comment: This term was obsoleted because it is an unnecessary grouping class.
1-butanol biosynthetic process (GO:0071271)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 1-butanol, an alkyl primary alcohol with the formula C4H10O.
Synonyms: 1-butanol anabolism; 1-butanol biosynthesis; 1-butanol formation; 1-butanol synthesis; butan-1-ol biosynthetic process; butanol biosynthetic process
morphine metabolic process (GO:0071272)
Namespace: biological_process
Definition: The chemical reactions and pathways involving morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.
Synonyms: morphine metabolism
morphine catabolic process (GO:0071273)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.
Synonyms: morphine breakdown; morphine catabolism; morphine degradation
isoquinoline alkaloid catabolic process (GO:0071274)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.
Synonyms: ipecac alkaloid catabolism; isoquinoline alkaloid breakdown; isoquinoline alkaloid catabolism; isoquinoline alkaloid degradation
cellular response to aluminum ion (GO:0071275)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aluminum ion stimulus.
Synonyms: cellular response to aluminium ion; cellular response to aluminum
cellular response to cadmium ion (GO:0071276)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
Synonyms: cellular response to cadmium
cellular response to calcium ion (GO:0071277)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
Synonyms: cellular response to Ca2+ ion
cellular response to cesium ion (GO:0071278)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.
Synonyms: cellular response to cesium
cellular response to cobalt ion (GO:0071279)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.
cellular response to copper ion (GO:0071280)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.
Synonyms: cellular response to copper
cellular response to iron ion (GO:0071281)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.
Synonyms: cellular response to iron
cellular response to iron(II) ion (GO:0071282)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.
Synonyms: cellular response to iron(II)