LiteFold/GO huggingface dataset:
positive regulation of unsaturated fatty acid biosynthetic process (GO:2001280)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of unsaturated fatty acid biosynthetic process.
Synonyms: positive regulation of fatty acid desaturation; positive regulation of polyunsaturated fatty acid biosynthesis; positive regulation of unsaturated fatty acid anabolism; positive regulation of unsaturated fatty acid biosynthesis; positive regulation of unsaturated fatty acid formation; positive regulation of unsaturated fatty acid synthesis
regulation of muscle cell chemotaxis toward tendon cell (GO:2001281)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of muscle cell chemotaxis toward tendon cell.
Synonyms: regulation of muscle cell attraction; regulation of muscle cell chemotaxis towards tendon cell
negative regulation of muscle cell chemotaxis toward tendon cell (GO:2001282)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of a muscle cell towards a tendon cell in response to an external stimulus. For example, when the muscle cell arrives at the target tendon cell, migration is arrested so that attachments can be made between the cells.
Synonyms: arrest of muscle cell chemotaxis; negative regulation of muscle cell attraction; negative regulation of muscle cell chemotaxis towards tendon cell
obsolete Roundabout signaling pathway involved in muscle cell chemotaxis toward tendon cell (GO:2001283)
Namespace: biological_process
Definition: OBSOLETE. Any Roundabout signaling pathway that is involved in the directed movement of a muscle cell towards a tendon cell in response to an external stimulus.
Synonyms: ROBO signaling pathway involved in muscle cell attraction; ROBO signaling pathway involved in muscle cell chemotaxis toward tendon cell; ROBO signaling pathway involved in muscle cell chemotaxis towards tendon cell; ROBO/SLIT signaling pathway involved in muscle cell attraction; ROBO/SLIT signaling pathway involved in muscle cell chemotaxis toward tendon cell; ROBO/SLIT signaling pathway involved in muscle cell chemotaxis towards tendon cell; Roundabout signaling pathway involved in muscle cell attraction; Roundabout signaling pathway involved in muscle cell chemotaxis towards tendon cell; Roundabout signalling pathway involved in muscle cell attraction; Roundabout signalling pathway involved in muscle cell chemotaxis toward tendon cell; Roundabout signalling pathway involved in muscle cell chemotaxis towards tendon cell
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
regulation of BMP secretion (GO:2001284)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of BMP secretion.
Synonyms: regulation of BMP protein secretion; regulation of bone morphogenetic protein secretion
regulation of caveolin-mediated endocytosis (GO:2001286)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of caveolin-mediated endocytosis.
Synonyms: regulation of caveolae-dependent endocytosis; regulation of caveolae-mediated endocytosis; regulation of caveolin-dependent endocytosis
negative regulation of caveolin-mediated endocytosis (GO:2001287)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of caveolin-mediated endocytosis.
Synonyms: negative regulation of caveolae-dependent endocytosis; negative regulation of caveolae-mediated endocytosis; negative regulation of caveolin-dependent endocytosis
positive regulation of caveolin-mediated endocytosis (GO:2001288)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.
Synonyms: positive regulation of caveolae-dependent endocytosis; positive regulation of caveolae-mediated endocytosis; positive regulation of caveolin-dependent endocytosis
lipid X metabolic process (GO:2001289)
Namespace: biological_process
Definition: The chemical reactions and pathways involving lipid X, 2,3-diacylglucosamine 1-phosphate.
Synonyms: 2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate metabolic process; 2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate metabolism; 2,3-Bis(beta-hydoroxymyristoyl)-beta-D-glucosaminyl 1-phosphate metabolic process; 2,3-Bis(beta-hydoroxymyristoyl)-beta-D-glucosaminyl 1-phosphate metabolism; 2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-alpha-D-glucopyranose metabolic process; 2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-alpha-D-glucopyranose metabolism; lipid X metabolism
obsolete hydroperoxide metabolic process (GO:2001290)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a hydroperoxide.
Synonyms: hydroperoxide metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
codeine metabolic process (GO:2001291)
Namespace: biological_process
Definition: The chemical reactions and pathways involving codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.
Synonyms: codeine metabolism
codeine catabolic process (GO:2001292)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.
Synonyms: codeine breakdown; codeine catabolism; codeine degradation
malonyl-CoA metabolic process (GO:2001293)
Namespace: biological_process
Definition: The chemical reactions and pathways involving malonyl-CoA, the S-malonyl derivative of coenzyme A.
Synonyms: malonyl-CoA metabolism
malonyl-CoA catabolic process (GO:2001294)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of malonyl-CoA, the S-malonyl derivative of coenzyme A.
Synonyms: malonyl-CoA breakdown; malonyl-CoA catabolism; malonyl-CoA degradation
malonyl-CoA biosynthetic process (GO:2001295)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.
Synonyms: malonyl-CoA anabolism; malonyl-CoA biosynthesis; malonyl-CoA formation; malonyl-CoA synthesis
obsolete N(omega)-methyl-L-arginine metabolic process (GO:2001296)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving N(omega)-methyl-L-arginine.
Synonyms: N(omega)-methyl-L-arginine metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete N(omega)-methyl-L-arginine catabolic process (GO:2001297)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of N(omega)-methyl-L-arginine.
Synonyms: N(omega)-methyl-L-arginine breakdown; N(omega)-methyl-L-arginine catabolism; N(omega)-methyl-L-arginine degradation
Comment: The reason for obsoletion is that there is no evidence that this function/process/component exists.
obsolete N(omega),N(omega)-dimethyl-L-arginine metabolic process (GO:2001298)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.
Synonyms: N(omega),N(omega)-dimethyl-L-arginine metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete N(omega),N(omega)-dimethyl-L-arginine catabolic process (GO:2001299)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.
Synonyms: N(omega),N(omega)-dimethyl-L-arginine breakdown; N(omega),N(omega)-dimethyl-L-arginine catabolism; N(omega),N(omega)-dimethyl-L-arginine degradation
Comment: The reason for obsoletion is that there is no evidence that this function/process/component exists.
obsolete lipoxin metabolic process (GO:2001300)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.
Synonyms: lipoxin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
lipoxin A4 metabolic process (GO:2001302)
Namespace: biological_process
Definition: The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.
Synonyms: lipoxin A4 metabolism; LXA4 metabolic process; LXA4 metabolism
lipoxin A4 biosynthetic process (GO:2001303)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.
Synonyms: lipoxin A4 anabolism; lipoxin A4 biosynthesis; lipoxin A4 formation; lipoxin A4 synthesis; LXA4 anabolism; LXA4 biosynthesis; LXA4 biosynthetic process; LXA4 formation; LXA4 synthesis
lipoxin B4 metabolic process (GO:2001304)
Namespace: biological_process
Definition: The chemical reactions and pathways involving lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.
Synonyms: lipoxin B4 metabolism; LXB4 metabolic process; LXB4 metabolism
obsolete xanthone-containing compound metabolic process (GO:2001305)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a xanthone-containing compound.
Synonyms: xanthone metabolism; xanthone-containing compound metabolism; xanthones metabolic process; xanthones metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
lipoxin B4 biosynthetic process (GO:2001306)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.
Synonyms: lipoxin B4 anabolism; lipoxin B4 biosynthesis; lipoxin B4 formation; lipoxin B4 synthesis; LXB4 anabolism; LXB4 biosynthesis; LXB4 biosynthetic process; LXB4 formation; LXB4 synthesis
xanthone-containing compound biosynthetic process (GO:2001307)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a xanthone-containing compound.
Synonyms: xanthone biosynthesis; xanthone biosynthetic process; xanthone-containing compound anabolism; xanthone-containing compound biosynthesis; xanthone-containing compound formation; xanthone-containing compound synthesis; xanthones anabolism; xanthones biosynthesis; xanthones biosynthetic process; xanthones formation; xanthones synthesis
obsolete gliotoxin metabolic process (GO:2001308)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.
Synonyms: gliotoxin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
gliotoxin catabolic process (GO:2001309)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.
Synonyms: gliotoxin breakdown; gliotoxin catabolism; gliotoxin degradation
lysobisphosphatidic acid metabolic process (GO:2001311)
Namespace: biological_process
Definition: The chemical reactions and pathways involving a lysobisphosphatidic acid. A lysobisphosphatidic acid is a lysophosphatidic acid having the unusual property of a phosphodiester moiety linked to positions sn-1 and sn1' of glycerol; and two additional fatty acids esterified to the glycerol head group.
Synonyms: bis(monoacylglycerol) hydrogen phosphate (BMP) metabolic process; bis(monoacylglycerol) hydrogen phosphate (BMP) metabolism; bis(monoacylglycerol) hydrogen phosphate metabolic process; bis(monoacylglycerol) hydrogen phosphate metabolism; LBPA metabolic process; LBPA metabolism; lysobisphosphatidic acid metabolism
obsolete UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process (GO:2001313)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.
Synonyms: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolic process (GO:2001314)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.
Synonyms: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose breakdown; UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolism; UDP-4-deoxy-4-formamido-beta-L-arabinopyranose degradation
Comment: The reason for obsoletion is that this term is not clearly defined.
UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthetic process (GO:2001315)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.
Synonyms: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose anabolism; UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthesis; UDP-4-deoxy-4-formamido-beta-L-arabinopyranose formation; UDP-4-deoxy-4-formamido-beta-L-arabinopyranose synthesis
obsolete kojic acid metabolic process (GO:2001316)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving kojic acid.
Synonyms: 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one metabolic process; 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one metabolism; C6H6O4 metabolic process; C6H6O4 metabolism; kojic acid metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
kojic acid biosynthetic process (GO:2001317)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of kojic acid.
Synonyms: 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism; 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis; 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process; 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation; 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis; C6H6O4 anabolism; C6H6O4 biosynthesis; C6H6O4 biosynthetic process; C6H6O4 formation; C6H6O4 synthesis; kojic acid anabolism; kojic acid biosynthesis; kojic acid formation; kojic acid synthesis
mitochondrial pyruvate carrier complex (GO:7770001)
Namespace: cellular_component
Definition: An inner mitochondrial protein carrier capable of transporting pyruvate into the mitochondrion.
amino acid conjugated cholate hydrolase activity (GO:7770003)
Namespace: molecular_function
Definition: Catalysis of the reaction: an L-alpha-amino acid + cholate = an N-choloyl-L-alpha-amino acid + H2O.
L-alanine conjugated cholate hydrolase activity (GO:7770005)
Namespace: molecular_function
Definition: Catalysis of the reaction: cholate + L-alanine = L-alanocholate + H2O.
L-phenylalanine conjugated cholate hydrolase activity (GO:7770006)
Namespace: molecular_function
Definition: Catalysis of the reaction: cholate + L-phenylalanine = L-phenylalanocholate + H2O.
L-arginine conjugated cholate hydrolase activity (GO:7770007)
Namespace: molecular_function
Definition: Catalysis of the reaction: cholate + L-arginine = L-arginocholate + H2O.
L-histidine conjugated cholate hydrolase activity (GO:7770008)
Namespace: molecular_function
Definition: Catalysis of the reaction: cholate + L-histidine = L-histidocholate + H2O.
L-tryptophan conjugated cholate hydrolase activity (GO:7770009)
Namespace: molecular_function
Definition: Catalysis of the reaction: cholate + L-tryptophan = L-tryptophocholate + H2O.
GTPBP3-MTO1 complex (GO:7770010)
Namespace: cellular_component
Definition: A protein complex consisting of GTP binding protein 3 (GTPBP3) and mitochondrial tRNA translation optimization 1 (MTO1). The complex catalyzes the formation of 5-taurinomethyluridine at wobble position U34 of mitochondrial tRNAs.
Synonyms: 5-taurinomethyluridine-tRNA synthase
lipid exchange activity (GO:7770011)
Namespace: molecular_function
Definition: Enables the transfer of a specific lipid molecule from one membrane to another, coupled with the simultaneous counter-transfer of a different lipid molecule in the opposite direction.
negative regulation of starch biosynthetic process (GO:7770012)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of starch.
humanin receptor complex (GO:7770013)
Namespace: cellular_component
Definition: A protein complex that acts as a receptor for the neuroprotective peptide humanin (HN). In humans the receptor complex is a trimer composed of CNTFR, IL6ST and IL27RA. HN binding to IL27RA and CNTFR induces oligomerization of the three subunits.
Synonyms: HN receptor complex
spermatid mitochondrial nucleoid elimination (GO:7770014)
Namespace: biological_process
Definition: The process in which spermatids lose their mitochondrial nucleoids during spermatid development. This process involves the controlled elimination of mitochondrial DNA-protein complexes while preserving the mitochondrial membranes and and contributes to maternal mitochondrial inheritance patterns by inhibiting paternal transmission.
Synonyms: paternal mtDNA elimination; spermatid mitochondrial genome elimination; spermatid nucleoid degradation
intermembrane lipid transporter complex (GO:7770015)
Namespace: cellular_component
Definition: A protein complex that mediates the transport of lipids between membranes, in which a lipid molecule or molecules is transferred through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane.
Synonyms: lipid transporter complex
rescue of stalled mitochondrial ribosome (GO:7770016)
Namespace: biological_process
Definition: A process of mitochondrial translational elongation that takes place when a mitochondrial ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.
plasma membrane expansion (GO:7770017)
Namespace: biological_process
Definition: A cellular process which results in an increase in the size (surface area) of the plasma membrane during cell growth or osmotic stress. This can occur by lipid transfer, membrane trafficking, or eisosome disassembly.
Synonyms: plasma membrane biogenesis
negative regulation of enteroendocrine cell differentiation (GO:7770019)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of enteroendocrine cell differentiation.
intestinal enterochromaffin enteroendocrine cell differentiation (GO:7770020)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an intestinal enterochromaffin enteroendocrine cell. Enterochromaffin enteroendocrine cells are found in the gastrointestinal mucosa and secrete serotonin and some neurotransmitters including enkephalins and substance P.
Synonyms: type EC enteroendocrine cell differentiation
intestinal type I enteroendocrine cell differentiation (GO:7770022)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an intestinal type I enteroendocrine cell. Intestinal type I enteroendocrine cells are found in the duodenum and jejunum and secrete cholecystokinin.
Synonyms: CCK cell differentiation
intestinal type L enteroendocrine cell differentiation (GO:7770023)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an intestinal type L enteroendocrine cell. Intestinal type L enteroendocrine cells are found in ileum and large intestine and secrete glucagon-like peptides.
intestinal type N enteroendocrine cell differentiation (GO:7770024)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an intestinal type N enteroendocrine cell. Intestinal type N enteroendocrine cells are found in the ileum and jejunum and secrete neurotensin.
intestinal type D enteroendocrine cell differentiation (GO:7770025)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an intestinal type D enteroendocrine cell. Intestinal type D enteroendocrine cells are found in the gastrointestinal tract and in the pancreas and secrete somatostatin.
N(6),N(6),N(6)-trimethyl-L-lysine transmembrane transporter activity (GO:7770026)
Namespace: molecular_function
Definition: Enables the transfer of N(6),N(6),N(6)-trimethyl-L-lysine from one side of a membrane to the other.
dimethylarginine transmembrane transporter activity (GO:7770027)
Namespace: molecular_function
Definition: Enables the transfer of dimethylarginine from one side of a membrane to the other.
glycoprotein cargo receptor activity (GO:7770028)
Namespace: molecular_function
Definition: Binding specifically to a glycoprotein (cargo) to deliver it to a transport vesicle. Glycoprotein cargo receptors span membranes, binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit the cargo molecules to nascent vesicles.
rod photoreceptor phosphodiesterase 6 complex (GO:7770030)
Namespace: cellular_component
Definition: A heterotetrameric cGMP phosphodiesterase complex found in the disc membranes of rod photoreceptor outer segments. It consists of two catalytic subunits, PDE6A and PDE6B, and two inhibitory gamma-subunits, PDE6G. In response to activation by transducin, the complex hydrolyzes cyclic GMP, thereby mediating the light-induced closure of cGMP-gated ion channels during rod phototransduction.
Synonyms: rod PDE6 complex; rod photoreceptor PDE6 complex
sodium ion sequestering activity (GO:7770031)
Namespace: molecular_function
Definition: Binding to a sodium ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.
tyramine transport (GO:7770032)
Namespace: biological_process
Definition: The directed movement of tyramine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tyramine is a monoamine neurotransmitter occurring predominantly in invertebrates.
octopamine transport (GO:7770033)
Namespace: biological_process
Definition: The directed movement of octopamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Octopamine is a monoamine neurotransmitter occurring predominantly in invertebrates.
nickel-pincer nucleotide cofactor biosynthetic process (GO:7770034)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of nickel-pincer nucleotide (NPN) cofactor, also known as nickel pyridinium-3,5-bisthiocarboxylic acid mononucleotide.
Synonyms: NPN cofactor biosynthetic process