LiteFold/GO huggingface dataset:
obsolete modulation by symbiont of host digestive system process (GO:0044056)
Namespace: biological_process
Definition: OBSOLETE. The alteration by a symbiont organism of the functioning of a digestive system process, a physical, chemical, or biochemical process carried out by the host organism to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
Synonyms: regulation by symbiont of host digestive system process
Comment: This term was obsoleted because it is not sufficiently precise.
regulation of system process (GO:0044057)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by any of the organs or tissues in an organ system.
regulation of digestive system process (GO:0044058)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
obsolete modulation by symbiont of host endocrine process (GO:0044059)
Namespace: biological_process
Definition: OBSOLETE. The alteration by a symbiont organism of the functioning of a endocrine process, any of the hormonal, neural, and secretory processes that release products into the blood or lymph, in the host organism.
Synonyms: regulation by symbiont of host endocrine process
Comment: This term was obsoleted because it is not sufficiently precise.
regulation of endocrine process (GO:0044060)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.
Synonyms: regulation of endocrine system process
obsolete modulation by symbiont of host excretion (GO:0044061)
Namespace: biological_process
Definition: OBSOLETE. The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.
Synonyms: regulation by symbiont of host excretion
Comment: This term was obsoleted because there is no evidence that this process exists.
regulation of excretion (GO:0044062)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.
obsolete modulation by symbiont of host nervous system process (GO:0044063)
Namespace: biological_process
Definition: OBSOLETE. The alteration by a symbiont organism of the functioning of a host neurophysiological process, an organ system process carried out by any of the organs or tissues of neurological system.
Synonyms: modulation by symbiont of host neurological system process; regulation by symbiont of host neurological system process
Comment: This term was obsoleted because it is not sufficiently precise.
obsolete modulation by symbiont of host respiratory system process (GO:0044064)
Namespace: biological_process
Definition: OBSOLETE. The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.
Synonyms: regulation by symbiont of host respiratory system process
Comment: This term was obsoleted because it is not sufficiently precise.
regulation of respiratory system process (GO:0044065)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.
symbiont-mediated disruption of host cell nucleus (GO:0044066)
Namespace: biological_process
Definition: The process in which an organism effects a change that impairs the structure or function of the host cell nucleus.
Synonyms: disruption by symbiont of host cell nucleus; modification by symbiont of host cell nucleus; modification by symbiont of host nucleus; modification of host cell nucleus by symbiont; modification of host nucleus by symbiont
symbiont-mediated perturbation of host cell-cell junction (GO:0044067)
Namespace: biological_process
Definition: The process in which an organism effects a change that impairs the structure or temporarily subverts the host intercellular junction. Intercellular junction include tight junctions and adherens junctions.
Synonyms: disruption of host cell-cell junction; modification by symbiont of host cell-cell junction; modification by symbiont of host intercellular junctions; modification of host cell-cell junction; modification of host intercellular junctions by symbiont; symbiont-mediated disruption of host cell-cell junction
symbiont-mediated perturbation of host cellular process (GO:0044068)
Namespace: biological_process
Definition: A process in which a symbiont alters or subverts a cellular biological process in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by symbiont of host cellular process; modulation of host cellular process by symbiont; regulation by symbiont of host cellular process; regulation of host cellular process by symbiont
obsolete modulation by symbiont of host anion transport (GO:0044069)
Namespace: biological_process
Definition: OBSOLETE. The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.
Synonyms: modification of host anion transport by symbiont
Comment: This term was obsoleted because there is no evidence that this process exists.
symbiont-mediated perturbation of host cell cycle progression (GO:0044071)
Namespace: biological_process
Definition: A process in which a symbiont interferes with the normal progression through the host cell cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modification by symbiont of host cell cycle; modulation by symbiont of host cell cycle; modulation of host cell cycle by symbiont; perturbation of host cell cycle progression; regulation by symbiont of host cell cycle
obsolete symbiont-mediated suppression of host cell cycle progression (GO:0044072)
Namespace: biological_process
Definition: OBSOLETE. A process in which a symbiont interferes with, inhibits or stops progression through the host cell cycle.
Synonyms: cell cycle arrest in host; negative regulation by symbiont of host cell cycle; suppression of host cell cycle progression
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete modulation by symbiont of host translation (GO:0044073)
Namespace: biological_process
Definition: OBSOLETE. The process in which a symbiont organism effects a change in translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.
Synonyms: modification by symbiont of host translation; modulation of host translation by symbiont; regulation by symbiont of host translation
Comment: This term was obsoleted because it represents the same process as symbiont-mediated perturbation of host translation ; GO0019057.
obsolete negative regulation by symbiont of host translation (GO:0044074)
Namespace: biological_process
Definition: OBSOLETE. The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.
Synonyms: negative regulation of host translation by symbiont
Comment: This term was obsoleted because it represents the same process as symbiont-mediated suppression of host translation ; GO:0039604.
symbiont-mediated perturbation of host vacuole organization (GO:0044075)
Namespace: biological_process
Definition: A process in which a symbiont alters or subverts vacuole organization in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by symbiont of host vacuole biogenesis; modulation by symbiont of host vacuole organisation; modulation by symbiont of host vacuole organization; modulation of host vacuole organization by symbiont; regulation by symbiont of host vacuole organization
obsolete positive regulation by symbiont of host vacuole organization (GO:0044076)
Namespace: biological_process
Definition: OBSOLETE. The process in which a symbiont organism activates or increases the frequency, rate or extent of vacuole organization in its host organism.
Synonyms: positive regulation by symbiont of host vacuole biogenesis; positive regulation by symbiont of host vacuole organisation; positive regulation of host vacuole organization by symbiont
Comment: This term was obsoleted because this process is not known to exist.
symbiont-mediated perturbation of host receptor-mediated endocytosis (GO:0044077)
Namespace: biological_process
Definition: A process in which a symbiont initiates, promotes, or enhances host receptor-mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by symbiont of host receptor-mediated endocytosis; modulation of host receptor-mediated endocytosis by symbiont; regulation by symbiont of host receptor-mediated endocytosis
obsolete positive regulation by symbiont of host receptor-mediated endocytosis (GO:0044078)
Namespace: biological_process
Definition: OBSOLETE. Any process in which a symbiont organism activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport, in its host organism.
Synonyms: positive regulation of host receptor-mediated endocytosis by symbiont
Comment: This term was obsoleted because there is no evidence that this process exists.
symbiont-mediated perturbation of host neurotransmitter secretion (GO:0044079)
Namespace: biological_process
Definition: A process in which a symbiont alters or subverts the regulated release of a neurotransmitter from a cell in its host organism.
Synonyms: modification by symbiont of host neurotransmitter secretion; modulation by symbiont of host neurotransmitter secretion; modulation of host neurotransmitter secretion by symbiont; regulation by symbiont of host neurotransmitter secretion
obsolete symbiont-mediated perturbation of host cGMP-mediated signal transduction (GO:0044080)
Namespace: biological_process
Definition: OBSOLETE. A process in which a symbiont alters or subverts a cGMP-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by symbiont of host cGMP-mediated signal transduction; modulation by symbiont of host cGMP-mediated signal transduction pathway; modulation by symbiont of host cGMP-mediated signaling; modulation by symbiont of host cGMP-mediated signalling; modulation of host cGMP-mediated signal transduction by symbiont; perturbation of host cGMP-mediated signal transduction; regulation by symbiont of host cGMP-mediated signal transduction
Comment: This term was obsoleted because it was not clearly defined: the pathway perturbed is not clearly defined.
obsolete symbiont-mediated suppression of host nitric oxide-mediated signaling (GO:0044081)
Namespace: biological_process
Definition: OBSOLETE. A process in which a virus interferes with, inhibits or disrupts a nitric oxide mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: disruption of host nitric oxide-mediated signaling; modulation by symbiont of host nitric oxide mediated signal transduction; modulation of host nitric oxide-mediated signal transduction by symbiont; modulation of host nitric oxide-mediated signaling by symbiont; modulation of host nitric oxide-mediated signalling by symbiont; regulation by symbiont of host nitric oxide-mediated signal transduction; suppression of host nitric oxide-mediated signaling
Comment: This term was obsoleted because there is no evidence that this process exists; ie that a symbiont directly interferes with a host's notric oxide-mediated signaling pathway.
symbiont-mediated perturbation of host small GTPase-mediated signal transduction (GO:0044082)
Namespace: biological_process
Definition: A process in which a symbiont alters or subverts a small GTPase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by symbiont of host small GTPase mediated signal transduction; modulation of host small GTPase mediated signal transduction by symbiont; perturbation of host small GTPase mediated signal transduction; regulation by symbiont of host small GTPase mediated signal transduction
symbiont-mediated perturbation of host Rho small GTPase signal transduction (GO:0044083)
Namespace: biological_process
Definition: A process in which a symbiont alters a Rho protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by symbiont of host Rho protein mediated signal transduction; modulation by symbiont of host Rho protein signal transduction; modulation by symbiont of host Rho protein-mediated signal transduction; modulation of host Rho protein signal transduction by symbiont; modulation of host Rho protein signaling by symbiont; modulation of host Rho protein signalling by symbiont; perturbation of host Rho protein signal transduction; regulation by symbiont of host Rho protein signal transduction; symbiont-mediated perturbation of host Rho protein signal transduction
host cell membrane pore complex (GO:0044084)
Namespace: cellular_component
Definition: Any small opening in a host cell membrane that allows the passage of gases and/or liquids, composed of host proteins.
Synonyms: pore complex in host cell membrane
cellular component biogenesis (GO:0044085)
Namespace: biological_process
Definition: A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component.
Synonyms: cellular component biogenesis at cellular level
regulation of cellular component biogenesis (GO:0044087)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.
regulation of vacuole organization (GO:0044088)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.
Synonyms: regulation of vacuole biogenesis; regulation of vacuole organisation
positive regulation of cellular component biogenesis (GO:0044089)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.
positive regulation of vacuole organization (GO:0044090)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.
Synonyms: positive regulation of vacuole biogenesis; positive regulation of vacuole organisation
membrane biogenesis (GO:0044091)
Namespace: biological_process
Definition: A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane.
negative regulation of molecular function (GO:0044092)
Namespace: biological_process
Definition: Any process that stops or reduces the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.
positive regulation of molecular function (GO:0044093)
Namespace: biological_process
Definition: Any process that activates or increases the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.
host cell nuclear part (GO:0044094)
Namespace: cellular_component
Definition: Any constituent part of a host cell's nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. The host is the larger of the organisms involved in a symbiotic interaction.
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
host cell nucleoplasm (GO:0044095)
Namespace: cellular_component
Definition: That part of a host cell's nuclear content other than the chromosomes or the nucleolus. The host is the larger of the organisms involved in a symbiotic interaction.
type IV pilus (GO:0044096)
Namespace: cellular_component
Definition: A short filamentous structure on the surface of a bacterial cell distinguished from other pili by post-translational N-methylation of the pilin monomers.
Synonyms: TFP; type 4 pilus; type IV fimbriae
secretion by the type IV secretion system (GO:0044097)
Namespace: biological_process
Definition: The controlled release of proteins or DNA by a cell, via the type IV secretion system.
Synonyms: secretion via the type IV secretion system
DNA secretion by the type IV secretion system (GO:0044098)
Namespace: biological_process
Definition: The controlled release of DNA by a cell, via the type IV secretion system.
Synonyms: DNA secretion via the type IV secretion system
polar tube (GO:0044099)
Namespace: cellular_component
Definition: A highly specialized structure unique to microsporidia that is required for host cell invasion. In the spore, the polar tube is connected at the anterior end, and then coils around the sporoplasm. Upon appropriate environmental stimulation, the polar tube rapidly discharges out of the spore, pierces a cell membrane and serves as a conduit for sporoplasm passage into the new host cell.
sporoplasm (GO:0044100)
Namespace: cellular_component
Definition: The complex infective apparatus corresponding to the central mass of cytoplasm within a spore that is injected into a host cell by various parasitic microorganisms.
purine deoxyribosyltransferase activity (GO:0044102)
Namespace: molecular_function
Definition: Catalysis of deoxyribose exchange between purine deoxyribonucleoside as a donor and purine base as an acceptor.
Synonyms: PTD; purine 2'-deoxyribosyltransferase activity
2,5-dioxovalerate dehydrogenase (NAD+) activity (GO:0044104)
Namespace: molecular_function
Definition: Catalysis of the reaction: 2,5-dioxopentanoate + NAD+ + H2O = 2-oxoglutarate + NADH + H+.
Synonyms: 2,5-dioxopentanoate dehydrogenase (NAD+) activity; 2,5-dioxopentanoate:NAD+ 5-oxidoreductase activity
L-xylulose reductase (NADH) activity (GO:0044105)
Namespace: molecular_function
Definition: Catalysis of the reaction: xylitol + NAD+ = L-xylulose + NADH + H+.
obsolete cellular alcohol metabolic process (GO:0044107)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.
Comment: This term was obsoleted because it is an unnecessary grouping classes.
obsolete cellular alcohol biosynthetic process (GO:0044108)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, carried out at the level of an individual cell.
Comment: This term was obsoleted because it is an unnecessary grouping classes.
obsolete cellular alcohol catabolic process (GO:0044109)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, occurring at the level of the individual cell.
Comment: This term was obsoleted because it is an unnecessary grouping classes.
formation of structure involved in a symbiotic process (GO:0044111)
Namespace: biological_process
Definition: The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.
Synonyms: development during symbiotic interaction; development involved in symbiotic interaction; development of symbiont during interaction with host; development of symbiont involved in interaction with host; development on or near surface of other organism during symbiotic interaction; development on or near surface of other organism involved in symbiotic interaction
obsolete development in other organism involved in symbiotic interaction (GO:0044113)
Namespace: biological_process
Definition: OBSOLETE. The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.
Synonyms: development in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents both a process and a location.
development of symbiont in host (GO:0044114)
Namespace: biological_process
Definition: The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: development of symbiont in host intercellular space; development of symbiont in host vascular tissue
Comment: This term partially replaces the obsolete term 'growth or development of symbiont in host ; GO:0044412'. See also 'biological process involved in interaction with host ; GO:0051701.
obsolete development of symbiont in host cell (GO:0044118)
Namespace: biological_process
Definition: OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents both a process and a location.
obsolete development of symbiont in host vacuole (GO:0044120)
Namespace: biological_process
Definition: OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in a host vacuole. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: development of symbiont in host organelle
Comment: This term was obsoleted because it represents both a process and a location.