LiteFold/GO huggingface dataset:
prenol biosynthetic process (GO:0016091)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.
Synonyms: prenol anabolism; prenol biosynthesis; prenol formation; prenol synthesis
prenol catabolic process (GO:0016092)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.
Synonyms: prenol breakdown; prenol catabolism; prenol degradation
polyprenol metabolic process (GO:0016093)
Namespace: biological_process
Definition: The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.
Synonyms: polyprenol metabolism
polyprenol biosynthetic process (GO:0016094)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.
Synonyms: polyprenol anabolism; polyprenol biosynthesis; polyprenol formation; polyprenol synthesis
polyprenol catabolic process (GO:0016095)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.
Synonyms: polyprenol breakdown; polyprenol catabolism; polyprenol degradation
monoterpenoid metabolic process (GO:0016098)
Namespace: biological_process
Definition: The chemical reactions and pathways involving monoterpenoid compounds, terpenoids having a C10 skeleton.
Synonyms: monoterpenoid metabolism
monoterpenoid biosynthetic process (GO:0016099)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of monoterpenoid compounds, terpenoids having a C10 skeleton.
Synonyms: monoterpenoid anabolism; monoterpenoid biosynthesis; monoterpenoid formation; monoterpenoid synthesis
monoterpenoid catabolic process (GO:0016100)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of monoterpenoid compounds, terpenoids having a C10 skeleton.
Synonyms: monoterpenoid breakdown; monoterpenoid catabolism; monoterpenoid degradation
diterpenoid metabolic process (GO:0016101)
Namespace: biological_process
Definition: The chemical reactions and pathways involving diterpenoid compounds, terpenoids with four isoprene units.
Synonyms: diterpene metabolic process; diterpene metabolism; diterpenoid metabolism
diterpenoid biosynthetic process (GO:0016102)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of diterpenoid compounds, terpenoids with four isoprene units.
Synonyms: diterpene biosynthesis; diterpene biosynthetic process; diterpenoid anabolism; diterpenoid biosynthesis; diterpenoid formation; diterpenoid synthesis
triterpenoid biosynthetic process (GO:0016104)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of triterpenoid compounds, terpenoids with six isoprene units.
Synonyms: triterpene biosynthesis; triterpene biosynthetic process; triterpenoid anabolism; triterpenoid biosynthesis; triterpenoid formation; triterpenoid synthesis
triterpenoid catabolic process (GO:0016105)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of triterpenoid compounds, terpenoids with six isoprene units.
Synonyms: triterpene catabolic process; triterpene catabolism; triterpenoid breakdown; triterpenoid catabolism; triterpenoid degradation
sesquiterpenoid biosynthetic process (GO:0016106)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.
Synonyms: sesquiterpenoid anabolism; sesquiterpenoid biosynthesis; sesquiterpenoid formation; sesquiterpenoid synthesis
sesquiterpenoid catabolic process (GO:0016107)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of sesquiterpenoid compounds, terpenoids with three isoprene units.
Synonyms: sesquiterpenoid breakdown; sesquiterpenoid catabolism; sesquiterpenoid degradation
obsolete tetraterpenoid metabolic process (GO:0016108)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving tetraterpenoid compounds, terpenoids with eight isoprene units.
Synonyms: tetraterpene metabolic process; tetraterpene metabolism; tetraterpenoid metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
tetraterpenoid biosynthetic process (GO:0016109)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of tetraterpenoid compounds, terpenoids with eight isoprene units.
Synonyms: tetraterpene biosynthesis; tetraterpene biosynthetic process; tetraterpenoid anabolism; tetraterpenoid biosynthesis; tetraterpenoid formation; tetraterpenoid synthesis
tetraterpenoid catabolic process (GO:0016110)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of tetraterpenoid compounds, terpenoids with eight isoprene units.
Synonyms: tetraterpene catabolic process; tetraterpene catabolism; tetraterpenoid breakdown; tetraterpenoid catabolism; tetraterpenoid degradation
obsolete polyterpenoid metabolic process (GO:0016111)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.
Synonyms: polyterpene metabolic process; polyterpene metabolism; polyterpenoid metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
polyterpenoid biosynthetic process (GO:0016112)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of polyterpenoid compounds, terpenoids with more than eight isoprene units.
Synonyms: polyterpene biosynthesis; polyterpene biosynthetic process; polyterpenoid anabolism; polyterpenoid biosynthesis; polyterpenoid formation; polyterpenoid synthesis
polyterpenoid catabolic process (GO:0016113)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of polyterpenoid compounds, terpenoids with more than eight isoprene units.
Synonyms: polyterpene catabolic process; polyterpene catabolism; polyterpenoid breakdown; polyterpenoid catabolism; polyterpenoid degradation
terpenoid biosynthetic process (GO:0016114)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.
Synonyms: terpenoid anabolism; terpenoid biosynthesis; terpenoid formation; terpenoid synthesis
carotenoid metabolic process (GO:0016116)
Namespace: biological_process
Definition: The chemical reactions and pathways involving carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
Synonyms: carotenoid metabolism
carotenoid catabolic process (GO:0016118)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
Synonyms: carotenoid breakdown; carotenoid catabolism; carotenoid degradation
carotene metabolic process (GO:0016119)
Namespace: biological_process
Definition: The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids.
Synonyms: carotene metabolism
carotene biosynthetic process (GO:0016120)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of carotenes, hydrocarbon carotenoids.
Synonyms: carotene anabolism; carotene biosynthesis; carotene formation; carotene synthesis
carotene catabolic process (GO:0016121)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.
Synonyms: carotene breakdown; carotene catabolism; carotene degradation
xanthophyll metabolic process (GO:0016122)
Namespace: biological_process
Definition: The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.
Synonyms: xanthophyll metabolism
xanthophyll biosynthetic process (GO:0016123)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.
Synonyms: xanthophyll anabolism; xanthophyll biosynthesis; xanthophyll formation; xanthophyll synthesis
xanthophyll catabolic process (GO:0016124)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of xanthophylls, oxygen-containing carotenoids.
Synonyms: xanthophyll breakdown; xanthophyll catabolism; xanthophyll degradation
sterol metabolic process (GO:0016125)
Namespace: biological_process
Definition: The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.
Synonyms: sterol metabolism
sterol catabolic process (GO:0016127)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.
Synonyms: sterol breakdown; sterol catabolism; sterol degradation
obsolete phytosteroid metabolic process (GO:0016128)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving phytosteroids, steroids of higher plants that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.
Synonyms: phytosteroid metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
phytosteroid biosynthetic process (GO:0016129)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of phytosteroids, steroids that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.
Synonyms: phytosteroid anabolism; phytosteroid biosynthesis; phytosteroid formation; phytosteroid synthesis
phytosteroid catabolic process (GO:0016130)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of phytosteroids, steroids that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.
Synonyms: phytosteroid breakdown; phytosteroid catabolism; phytosteroid degradation
brassinosteroid metabolic process (GO:0016131)
Namespace: biological_process
Definition: The chemical reactions and pathways involving brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.
Synonyms: brassinosteroid metabolism
brassinosteroid biosynthetic process (GO:0016132)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.
Synonyms: brassinosteroid anabolism; brassinosteroid biosynthesis; brassinosteroid formation; brassinosteroid synthesis
brassinosteroid catabolic process (GO:0016133)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.
Synonyms: brassinosteroid breakdown; brassinosteroid catabolism; brassinosteroid degradation
saponin metabolic process (GO:0016134)
Namespace: biological_process
Definition: The chemical reactions and pathways involving saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.
Synonyms: saponin metabolism
saponin biosynthetic process (GO:0016135)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.
Synonyms: saponin anabolism; saponin biosynthesis; saponin formation; saponin synthesis
saponin catabolic process (GO:0016136)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.
Synonyms: saponin breakdown; saponin catabolism; saponin degradation
glycoside metabolic process (GO:0016137)
Namespace: biological_process
Definition: The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.
Synonyms: glycoside metabolism; O-glycoside metabolic process; O-glycoside metabolism
glycoside biosynthetic process (GO:0016138)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.
Synonyms: glycoside anabolism; glycoside biosynthesis; glycoside formation; glycoside synthesis; O-glycoside anabolism; O-glycoside biosynthesis; O-glycoside biosynthetic process; O-glycoside formation; O-glycoside synthesis
glycoside catabolic process (GO:0016139)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.
Synonyms: glycoside breakdown; glycoside catabolism; glycoside degradation; O-glycoside breakdown; O-glycoside catabolic process; O-glycoside catabolism; O-glycoside degradation
obsolete S-glycoside metabolic process (GO:0016143)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.
Synonyms: S-glycoside metabolism; thioglycoside metabolic process; thioglycoside metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
S-glycoside biosynthetic process (GO:0016144)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.
Synonyms: S-glycoside anabolism; S-glycoside biosynthesis; S-glycoside formation; S-glycoside synthesis; thioglycoside biosynthesis; thioglycoside biosynthetic process
S-glycoside catabolic process (GO:0016145)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.
Synonyms: S-glycoside breakdown; S-glycoside catabolism; S-glycoside degradation; thioglycoside catabolic process; thioglycoside catabolism
obsolete protein-synthesizing GTPase activity, initiation (GO:0016146)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Synonyms: protein-synthesizing GTPase activity, initiation
Comment: This term was made obsolete because it contains both process and function information.
obsolete protein-synthesizing GTPase activity, elongation (GO:0016147)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Synonyms: protein-synthesizing GTPase activity, elongation
Comment: This term was made obsolete because it contains both process and function information.
obsolete protein-synthesizing GTPase activity, termination (GO:0016148)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Synonyms: protein-synthesizing GTPase activity, termination
Comment: This term was made obsolete because it contains both process and function information.
translation release factor activity, codon specific (GO:0016149)
Namespace: molecular_function
Definition: A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.
translation release factor activity, codon nonspecific (GO:0016150)
Namespace: molecular_function
Definition: A translation release factor that is not specific to particular codons; binds to guanine nucleotides.
nickel cation binding (GO:0016151)
Namespace: molecular_function
Definition: Binding to a nickel (Ni) cation.
Synonyms: Ni binding; nickel binding
mercury (II) reductase (NADP+) activity (GO:0016152)
Namespace: molecular_function
Definition: Catalysis of the reaction: H+ + Hg + NADP+ = Hg2+ + NADPH.
Synonyms: Hg:NADP+ oxidoreductase activity; mer A; mercurate(II) reductase activity; mercuric ion reductase activity; mercuric reductase activity; mercury reductase activity; mercury(II) reductase activity; reduced NADP:mercuric ion oxidoreductase activity
urocanate hydratase activity (GO:0016153)
Namespace: molecular_function
Definition: Catalysis of the reaction: 4-imidazolone-5-propanoate + H+ = trans-urocanate + H2O.
Synonyms: 3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase (urocanate-forming); 3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase activity; imidazolonepropionate hydrolase activity; urocanase activity
formyltetrahydrofolate dehydrogenase activity (GO:0016155)
Namespace: molecular_function
Definition: Catalysis of the reaction: 10-formyltetrahydrofolate + H2O + NADP+ = (6S)-5,6,7,8-tetrahydrofolate + CO2 + H+ + NADPH.
Synonyms: 10-formyl tetrahydrofolate:NADP oxidoreductase activity; 10-formyl-H2PtGlu:NADP oxidoreductase activity; 10-formyl-H4folate dehydrogenase activity; 10-formyltetrahydrofolate dehydrogenase activity; 10-formyltetrahydrofolate:NADP+ oxidoreductase activity; N10-formyltetrahydrofolate dehydrogenase activity
fumarate reductase (NADH) activity (GO:0016156)
Namespace: molecular_function
Definition: Catalysis of the reaction: NAD+ + succinate = fumarate + H+ + NADH.
Synonyms: NADH-dependent fumarate reductase activity
sucrose synthase activity (GO:0016157)
Namespace: molecular_function
Definition: Catalysis of the reaction: an NDP-alpha-D-glucose + D-fructose = a ribonucleoside 5'-diphosphate + H+ + sucrose. The phosphate acceptor can be UDP or ADP.
Synonyms: NDP-glucose:D-fructose 2-alpha-D-glucosyltransferase activity; sucrose synthetase activity; sucrose-UDP glucosyltransferase activity; sucrose-uridine diphosphate glucosyltransferase activity; UDP-glucose-fructose glucosyltransferase activity; UDPglucose-fructose glucosyltransferase activity; uridine diphosphoglucose-fructose glucosyltransferase activity
inositol hexakisphosphate 3-phosphatase activity (GO:0016158)
Namespace: molecular_function
Definition: Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate.
Synonyms: 1-phytase activity; 3-phytase activity; myo-inositol-hexakisphosphate 3-phosphohydrolase activity; myo-inositol-hexaphosphate 3-phosphohydrolase activity; phytase activity; phytate 1-phosphatase activity; phytate 3-phosphatase activity
muconolactone delta-isomerase activity (GO:0016159)
Namespace: molecular_function
Definition: Catalysis of the reaction: (S)-muconolactone = (4,5-dihydro-5-oxofuran-2-yl)-acetate.
Synonyms: 5-oxo-4,5-dihydrofuran-2-acetate delta3-delta2-isomerase activity; muconolactone D-isomerase activity; muconolactone isomerase activity
amylase activity (GO:0016160)
Namespace: molecular_function
Definition: Catalysis of the hydrolysis of amylose or an amylose derivative.
cellulose 1,4-beta-cellobiosidase activity (GO:0016162)
Namespace: molecular_function
Definition: Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.
Synonyms: 1,4-beta-cellobiohydrolase activity; 1,4-beta-D-glucan cellobiohydrolase activity; 1,4-beta-glucan cellobiosidase activity; avicelase activity; beta-1,4-glucan cellobiohydrolase activity; beta-1,4-glucan cellobiosylhydrolase activity; C1 cellulase activity; CBH 1; cellobiohydrolase activity; cellobiohydrolase I; cellobiosidase activity; exo-1,4-beta-D-glucanase activity; exo-beta-1,4-glucan cellobiohydrolase activity; exo-cellobiohydrolase activity; exocellobiohydrolase activity; exoglucanase activity
nitrogenase activity (GO:0016163)
Namespace: molecular_function
Definition: Catalysis of the reaction: 16 ATP + 16 H2O + N2 + 8 reduced [2Fe-2S]-[ferredoxin] = 16 ADP + 6 H+ + H2 + 2 NH4+ + 8 oxidized [2Fe-2S]-[ferredoxin] + 16 phosphate.
Synonyms: iron-iron nitrogenase activity; molybdenum-iron nitrogenase activity; reduced ferredoxin:dinitrogen oxidoreductase (ATP-hydrolysing) activity; vanadium-iron nitrogenase activity
linoleate 13S-lipoxygenase activity (GO:0016165)
Namespace: molecular_function
Definition: Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate.
Synonyms: carotene oxidase activity; fat oxidase activity; linoleate:oxygen 13-oxidoreductase activity; lionoleate:O2 oxidoreductase activity; lipoperoxidase activity; lipoxidase activity; lipoxydase activity; lipoxygenase activity
phytoene dehydrogenase activity (GO:0016166)
Namespace: molecular_function
Definition: Catalysis of the dehydrogenation of phytoene to produce a carotenoid intermediate such as phytofluene.
chlorophyll binding (GO:0016168)
Namespace: molecular_function
Definition: Binding to a chlorophyll; a compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
bacteriochlorophyll c binding (GO:0016169)
Namespace: molecular_function
Definition: Binding to bacteriochlorophyll c, a chlorophyll of photosynthetic bacteria, for example green sulfur bacteria.
interleukin-15 receptor binding (GO:0016170)
Namespace: molecular_function
Definition: Binding to an interleukin-15 receptor.
Synonyms: IL-15; interleukin-15 receptor ligand
obsolete cell surface antigen (GO:0016171)
Namespace: molecular_function
Definition: OBSOLETE. (Was not defined before being made obsolete).
Synonyms: cell surface antigen
Comment: This term was made obsolete because it represents a gene product, and because describing something as an 'antigen' means that an organism can produce antibodies to it, which says nothing about the gene product activity.