LiteFold/GO huggingface dataset:
left anterior basal body (GO:1902671)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a left anterior flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of left anterior cilium; cilial basal body of left anterior flagellum; ciliary basal body of left anterior cilium; ciliary basal body of left anterior flagellum; cilium basal body of left anterior cilium; cilium basal body of left anterior flagellum; left anterior flagellum ciliary basal body; microtubule basal body of left anterior cilium; microtubule basal body of left anterior flagellum
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
right anterior basal body (GO:1902672)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a right anterior flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of right anterior cilium; cilial basal body of right anterior flagellum; ciliary basal body of right anterior cilium; ciliary basal body of right anterior flagellum; cilium basal body of right anterior cilium; cilium basal body of right anterior flagellum; microtubule basal body of right anterior cilium; microtubule basal body of right anterior flagellum; right anterior flagellum ciliary basal body
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
left posteriolateral basal body (GO:1902673)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a left posteriolateral flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of left posteriolateral cilium; cilial basal body of left posteriolateral flagellum; cilial basal body of left posterolateral cilium; cilial basal body of left posterolateral flagellum; ciliary basal body of left posteriolateral cilium; ciliary basal body of left posteriolateral flagellum; ciliary basal body of left posterolateral cilium; ciliary basal body of left posterolateral flagellum; cilium basal body of left posteriolateral cilium; cilium basal body of left posteriolateral flagellum; cilium basal body of left posterolateral cilium; cilium basal body of left posterolateral flagellum; left posteriolateral flagellum ciliary basal body; microtubule basal body of left posteriolateral cilium; microtubule basal body of left posteriolateral flagellum; microtubule basal body of left posterolateral cilium; microtubule basal body of left posterolateral flagellum
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
right posteriolateral basal body (GO:1902674)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a right posteriolateral flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of right posteriolateral cilium; cilial basal body of right posteriolateral flagellum; cilial basal body of right posterolateral cilium; cilial basal body of right posterolateral flagellum; ciliary basal body of right posteriolateral cilium; ciliary basal body of right posteriolateral flagellum; ciliary basal body of right posterolateral cilium; ciliary basal body of right posterolateral flagellum; cilium basal body of right posteriolateral cilium; cilium basal body of right posteriolateral flagellum; cilium basal body of right posterolateral cilium; cilium basal body of right posterolateral flagellum; microtubule basal body of right posteriolateral cilium; microtubule basal body of right posteriolateral flagellum; microtubule basal body of right posterolateral cilium; microtubule basal body of right posterolateral flagellum; right posteriolateral flagellum ciliary basal body
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
left ventral basal body (GO:1902675)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a left ventral flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of left ventral cilium; cilial basal body of left ventral flagellum; ciliary basal body of left ventral cilium; ciliary basal body of left ventral flagellum; cilium basal body of left ventral cilium; cilium basal body of left ventral flagellum; left ventral flagellum ciliary basal body; microtubule basal body of left ventral cilium; microtubule basal body of left ventral flagellum
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
right ventral basal body (GO:1902676)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a right ventral flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of right ventral cilium; cilial basal body of right ventral flagellum; ciliary basal body of right ventral cilium; ciliary basal body of right ventral flagellum; cilium basal body of right ventral cilium; cilium basal body of right ventral flagellum; microtubule basal body of right ventral cilium; microtubule basal body of right ventral flagellum; right ventral flagellum ciliary basal body
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
left caudal basal body (GO:1902677)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a left caudal flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of left caudal cilium; cilial basal body of left caudal flagellum; ciliary basal body of left caudal cilium; ciliary basal body of left caudal flagellum; cilium basal body of left caudal cilium; cilium basal body of left caudal flagellum; left caudal flagellum ciliary basal body; microtubule basal body of left caudal cilium; microtubule basal body of left caudal flagellum
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
right caudal basal body (GO:1902678)
Namespace: cellular_component
Definition: Any ciliary basal body that is part of a right caudal flagellum found in Giardia species (trophozoite stage).
Synonyms: cilial basal body of right caudal cilium; cilial basal body of right caudal flagellum; ciliary basal body of right caudal cilium; ciliary basal body of right caudal flagellum; cilium basal body of right caudal cilium; cilium basal body of right caudal flagellum; microtubule basal body of right caudal cilium; microtubule basal body of right caudal flagellum; right caudal flagellum ciliary basal body
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also note that, due to the asymmetric nature of the Giardia trophozoite, this term is defined spatially as the trophozoite is viewed from the dorsal side, with the two nuclei dorsal to the ventral disc, and the ventral disc toward the anterior.
negative regulation of RNA biosynthetic process (GO:1902679)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process.
Synonyms: down regulation of RNA anabolism; down regulation of RNA biosynthesis; down regulation of RNA biosynthetic process; down regulation of RNA formation; down regulation of RNA synthesis; down-regulation of RNA anabolism; down-regulation of RNA biosynthesis; down-regulation of RNA biosynthetic process; down-regulation of RNA formation; down-regulation of RNA synthesis; downregulation of RNA anabolism; downregulation of RNA biosynthesis; downregulation of RNA biosynthetic process; downregulation of RNA formation; downregulation of RNA synthesis; inhibition of RNA anabolism; inhibition of RNA biosynthesis; inhibition of RNA biosynthetic process; inhibition of RNA formation; inhibition of RNA synthesis; negative regulation of RNA anabolism; negative regulation of RNA biosynthesis; negative regulation of RNA formation; negative regulation of RNA synthesis
positive regulation of RNA biosynthetic process (GO:1902680)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of RNA biosynthetic process.
Synonyms: activation of RNA anabolism; activation of RNA biosynthesis; activation of RNA biosynthetic process; activation of RNA formation; activation of RNA synthesis; positive regulation of RNA anabolism; positive regulation of RNA biosynthesis; positive regulation of RNA formation; positive regulation of RNA synthesis; up regulation of RNA anabolism; up regulation of RNA biosynthesis; up regulation of RNA biosynthetic process; up regulation of RNA formation; up regulation of RNA synthesis; up-regulation of RNA anabolism; up-regulation of RNA biosynthesis; up-regulation of RNA biosynthetic process; up-regulation of RNA formation; up-regulation of RNA synthesis; upregulation of RNA anabolism; upregulation of RNA biosynthesis; upregulation of RNA biosynthetic process; upregulation of RNA formation; upregulation of RNA synthesis
regulation of replication fork arrest at rDNA repeats (GO:1902681)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of replication fork arrest at rDNA repeats.
Synonyms: regulation of replication fork arrest at ribosomal DNA repeats; regulation of replication fork blocking at rDNA repeats
protein localization to pericentric heterochromatin (GO:1902682)
Namespace: biological_process
Definition: A process in which a protein is transported to, or maintained in the pericentric heterochromatin.
Synonyms: protein localisation in centromeric heterochromatin
regulation of receptor localization to synapse (GO:1902683)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of receptor localization to synapse.
Synonyms: regulation of receptor localisation to synapse
positive regulation of receptor localization to synapse (GO:1902685)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of receptor localization to synapse.
Synonyms: activation of receptor localisation to synapse; activation of receptor localization to synapse; positive regulation of receptor localisation to synapse; up regulation of receptor localisation to synapse; up regulation of receptor localization to synapse; up-regulation of receptor localisation to synapse; up-regulation of receptor localization to synapse; upregulation of receptor localisation to synapse; upregulation of receptor localization to synapse
glucosidase complex (GO:1902687)
Namespace: cellular_component
Definition: A protein complex which is capable of glucosidase activity.
Comment: An example of this is ygjK in E. coli (P42592) in PMID:23826932.
regulation of NAD metabolic process (GO:1902688)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of NAD metabolic process.
Synonyms: regulation of NAD (oxidized) metabolic process; regulation of NAD (oxidized) metabolism; regulation of NAD metabolism; regulation of NAD phosphorylation and dephosphorylation; regulation of nicotinamide adenine dinucleotide metabolic process; regulation of nicotinamide adenine dinucleotide metabolism; regulation of oxidized NAD metabolic process; regulation of oxidized NAD metabolism; regulation of oxidized nicotinamide adenine dinucleotide metabolic process; regulation of oxidized nicotinamide adenine dinucleotide metabolism
positive regulation of NAD metabolic process (GO:1902690)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of NAD metabolic process.
Synonyms: activation of NAD (oxidized) metabolic process; activation of NAD (oxidized) metabolism; activation of NAD metabolic process; activation of NAD metabolism; activation of NAD phosphorylation and dephosphorylation; activation of nicotinamide adenine dinucleotide metabolic process; activation of nicotinamide adenine dinucleotide metabolism; activation of oxidized NAD metabolic process; activation of oxidized NAD metabolism; activation of oxidized nicotinamide adenine dinucleotide metabolic process; activation of oxidized nicotinamide adenine dinucleotide metabolism; positive regulation of NAD (oxidized) metabolic process; positive regulation of NAD (oxidized) metabolism; positive regulation of NAD metabolism; positive regulation of NAD phosphorylation and dephosphorylation; positive regulation of nicotinamide adenine dinucleotide metabolic process; positive regulation of nicotinamide adenine dinucleotide metabolism; positive regulation of oxidized NAD metabolic process; positive regulation of oxidized NAD metabolism; positive regulation of oxidized nicotinamide adenine dinucleotide metabolic process; positive regulation of oxidized nicotinamide adenine dinucleotide metabolism; up regulation of NAD (oxidized) metabolic process; up regulation of NAD (oxidized) metabolism; up regulation of NAD metabolic process; up regulation of NAD metabolism; up regulation of NAD phosphorylation and dephosphorylation; up regulation of nicotinamide adenine dinucleotide metabolic process; up regulation of nicotinamide adenine dinucleotide metabolism; up regulation of oxidized NAD metabolic process; up regulation of oxidized NAD metabolism; up regulation of oxidized nicotinamide adenine dinucleotide metabolic process; up regulation of oxidized nicotinamide adenine dinucleotide metabolism; up-regulation of NAD (oxidized) metabolic process; up-regulation of NAD (oxidized) metabolism; up-regulation of NAD metabolic process; up-regulation of NAD metabolism; up-regulation of NAD phosphorylation and dephosphorylation; up-regulation of nicotinamide adenine dinucleotide metabolic process; up-regulation of nicotinamide adenine dinucleotide metabolism; up-regulation of oxidized NAD metabolic process; up-regulation of oxidized NAD metabolism; up-regulation of oxidized nicotinamide adenine dinucleotide metabolic process; up-regulation of oxidized nicotinamide adenine dinucleotide metabolism; upregulation of NAD (oxidized) metabolic process; upregulation of NAD (oxidized) metabolism; upregulation of NAD metabolic process; upregulation of NAD metabolism; upregulation of NAD phosphorylation and dephosphorylation; upregulation of nicotinamide adenine dinucleotide metabolic process; upregulation of nicotinamide adenine dinucleotide metabolism; upregulation of oxidized NAD metabolic process; upregulation of oxidized NAD metabolism; upregulation of oxidized nicotinamide adenine dinucleotide metabolic process; upregulation of oxidized nicotinamide adenine dinucleotide metabolism
respiratory basal cell differentiation (GO:1902691)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized features of a respiratory basal cell.
Synonyms: airway basal cell differentiation
Comment: Changes in the lineage choice of ABCs or their undifferentiated daughters might contribute to the mucous cell hyperplasia, metaplasia or squamous metaplasia seen in many respiratory disorders
regulation of neuroblast proliferation (GO:1902692)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of neuroblast proliferation.
metallochaperone complex (GO:1902695)
Namespace: cellular_component
Definition: A protein complex which is capable of metallochaperone activity.
obsolete glycine catabolic process to isobutanol (GO:1902696)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glycine to isobutanol.
Synonyms: glycine breakdown to isobutanol; glycine catabolism to isobutanol; glycine degradation to isobutanol
Comment: This term was obsoleted because it is beyond the specificity reppresented in GO.
obsolete L-valine catabolic process to isobutanol (GO:1902697)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of L-valine to isobutanol.
Synonyms: valine breakdown to isobutanol; valine catabolism to isobutanol; valine degradation to isobutanol
Comment: This term was obsoleted because it is beyond the specificity reppresented in GO.
obsolete pentose catabolic process to butyrate (GO:1902698)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to butyrate.
Synonyms: acidogenesis; pentose breakdown to butyrate; pentose catabolism to butyrate; pentose degradation to butyrate
Comment: The reason for obsoletion is that there is no evidence that this process exists.
obsolete pentose catabolic process to acetate (GO:1902699)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to acetate.
Synonyms: acidogenesis; pentose breakdown to acetate; pentose catabolism to acetate; pentose degradation to acetate
Comment: The reason for obsoletion is that there is no evidence that this process exists.
obsolete pentose catabolic process to propan-2-ol (GO:1902701)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.
Synonyms: pentose breakdown to propan-2-ol; pentose catabolic process to isopropanol; pentose catabolic process to isopropyl alcohol; pentose catabolism to propan-2-ol; pentose degradation to propan-2-ol; solventogenesis
Comment: The reason for obsoletion is that there is no evidence that this process exists.
obsolete hexose catabolic process to butan-1-ol (GO:1902703)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butan-1-ol.
Synonyms: hexose breakdown to butan-1-ol; hexose catabolic process to 1-butanol; hexose catabolic process to butanol; hexose catabolism to butan-1-ol; hexose degradation to butan-1-ol; solventogenesis
Comment: This term was obsoleted because there is no evidence that this pathway exists.
obsolete hexose catabolic process to acetone (GO:1902704)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetone.
Synonyms: hexose breakdown to acetone; hexose catabolic process to 2-propanone; hexose catabolism to acetone; hexose degradation to acetone; solventogenesis
Comment: This term was obsoleted because there is no evidence that this pathway exists.
obsolete hexose catabolic process to butyrate (GO:1902705)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butyrate.
Synonyms: acidogenesis; hexose breakdown to butyrate; hexose catabolism to butyrate; hexose degradation to butyrate
Comment: This term was obsoleted because there is no evidence that this pathway exists.
obsolete hexose catabolic process to acetate (GO:1902706)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetate.
Synonyms: acidogenesis; hexose breakdown to acetate; hexose catabolism to acetate; hexose degradation to acetate
Comment: This term was obsoleted because there is no evidence that this pathway exists.
cellular response to plumbagin (GO:1902709)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a plumbagin stimulus.
GABA receptor complex (GO:1902710)
Namespace: cellular_component
Definition: A protein complex which is capable of GABA receptor activity. Upon binding of gamma-aminobutyric acid (GABA) it transmits the signal from one side of the membrane to the other to initiate a change in cell activity. Major inhibitory receptor in vertebrate brain. Also found in other vertebrate tissues, invertebrates and possibly in plants. Effective benzodiazepine receptor.
Synonyms: gamma-aminobutyric acid receptor complex
G protein-coupled GABA receptor complex (GO:1902712)
Namespace: cellular_component
Definition: A protein complex which is capable of G protein-coupled GABA receptor activity. In human, it is usually a heterodimer composed of GABA-B receptor subunits 1 and 2.
Synonyms: G-protein coupled GABA receptor complex
Comment: An example of this is GABR1 in human (UniProt symbol Q9UBS5) in PMID:18790874.
cell cortex of growing cell tip (GO:1902716)
Namespace: cellular_component
Definition: Any cell cortex that is part of a growing cell tip.
Synonyms: cell cortex of growing cell end
obsolete sequestering of iron ion (GO:1902717)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of sequestering of iron ion.
Synonyms: sequestering of iron ion
Comment: This term was obsoleted at the TermGenie Gatekeeper stage.
obsolete sequestering of copper ion (GO:1902718)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of sequestering of copper ion.
Synonyms: sequestering of copper ion
Comment: This term was obsoleted at the TermGenie Gatekeeper stage.
obsolete extracellular sequestering of copper ion (GO:1902719)
Namespace: biological_process
Definition: OBSOLETE. The process of binding or confining copper ions in an extracellular area such that they are separated from other components of a biological system.
Synonyms: extracellular sequestering of copper ion
Comment: This term was obsoleted at the TermGenie Gatekeeper stage.
obsolete intracellular sequestering of copper ion (GO:1902720)
Namespace: biological_process
Definition: OBSOLETE. The process of binding or confining copper ions in an intracellular area such that they are separated from other components of a biological system.
Synonyms: intracellular sequestering of copper ion
Comment: This term was obsoleted at the TermGenie Gatekeeper stage.
negative regulation of prolactin secretion (GO:1902721)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of prolactin secretion.
Synonyms: down regulation of prolactin secretion; down-regulation of prolactin secretion; downregulation of prolactin secretion; inhibition of prolactin secretion
positive regulation of prolactin secretion (GO:1902722)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of prolactin secretion.
Synonyms: activation of prolactin secretion; up regulation of prolactin secretion; up-regulation of prolactin secretion; upregulation of prolactin secretion