LiteFold/GO huggingface dataset:
renal tubule development (GO:0061326)
Namespace: biological_process
Definition: The progression of the renal tubule over time from its formation to the mature form. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.
anterior Malpighian tubule development (GO:0061327)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the anterior Malpighian tubule over time, from its formation to the mature structure. The pair of anterior tubules arise from a dorsal region of the embryonic hindgut and projects forwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.
Malpighian tubule principal cell differentiation (GO:0061329)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule principal cell. A Malpighian tubule principal cell is an epithelial secretory cell that transports cations into the lumen of the tubule.
Malpighian tubule stellate cell differentiation (GO:0061330)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule stellate cell. A Malpighian tubule stellate cell is a specialized epithelial secretory cell that moves chloride ions and water across the tubule epithelium.
Malpighian tubule bud morphogenesis (GO:0061332)
Namespace: biological_process
Definition: The morphogenetic process in which a bud forms from the embryonic hindgut tube to form the Malpighian tubule. A bud is a protrusion that forms from the tube by localized changes in cell shape and position.
Synonyms: Malpighian tubule formation
renal tubule morphogenesis (GO:0061333)
Namespace: biological_process
Definition: The process in which the renal tubule is generated by specification of cell fate, through the maintenance of cell polarity, regulated cell proliferation and morphogenetic cell rearrangements, shape changes and growth. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.
cell rearrangement involved in Malpighian tubule morphogenesis (GO:0061334)
Namespace: biological_process
Definition: The movement of an epithelial cell with respect to other epithelial cells that contributes to the shaping of the Malpighian tubule.
Synonyms: cell migration involved in Malpighian tubule morphogenesis
obsolete cell growth involved in Malpighian tubule morphogenesis (GO:0061335)
Namespace: biological_process
Definition: OBSOLETE. The growth of an epithelial cell dependent on cycles of endoreplication, where growth contributes to the shaping of the Malpighian tubule.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
cell morphogenesis involved in Malpighian tubule morphogenesis (GO:0061336)
Namespace: biological_process
Definition: The shape change of an epithelial cell from a columnar to squamous cell morphology that contributes to the shaping of the Malpighian tubule.
cardiac conduction (GO:0061337)
Namespace: biological_process
Definition: Transfer of an organized electrical impulse across the heart to coordinate the contraction of cardiac muscles. The process begins with generation of an action potential (in the sinoatrial node (SA) in humans) and ends with a change in the rate, frequency, or extent of the contraction of the heart muscles.
obsolete atrioventricular node impulse conduction delay (GO:0061338)
Namespace: biological_process
Definition: OBSOLETE. A heart process that modulates the propagation of the signal that causes the heart muscle to contract.
Synonyms: atrioventricular node impulse conduction delay
Comment: This term was made obsolete because it was created before the cardiac conduction overhaul, and represents a measurement rather than a process.
establishment or maintenance of monopolar cell polarity (GO:0061339)
Namespace: biological_process
Definition: Any cellular process that results in the specification, formation or maintenance of monopolar intracellular organization or cell growth patterns. Monopolar cell organization is directional organization along an axis.
establishment or maintenance of monopolar cell polarity regulating cell shape (GO:0061340)
Namespace: biological_process
Definition: Any cellular process that results in the specification, formation or maintenance of a monopolar intracellular organization or cell growth patterns that regulate the shape of a cell.
non-canonical Wnt signaling pathway involved in heart development (GO:0061341)
Namespace: biological_process
Definition: The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via effectors other than beta-catenin and contributing to the progression of the heart over time.
Synonyms: non-canonical Wnt receptor signaling pathway involved in heart development; non-canonical Wnt receptor signalling pathway involved in heart development; non-canonical Wnt-activated signaling pathway involved in heart development
obsolete regulation of cell adhesion involved in heart morphogenesis by non-canonical Wnt signaling pathway (GO:0061342)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreased the extent of cell adhesion that contributes to the shaping of the heart.
Synonyms: regulation of cell adhesion involved in heart morphogenesis by non-canonical Wnt signalling pathway
Comment: This term was obsoleted because it represents a GO-CAM model.
cell adhesion involved in heart morphogenesis (GO:0061343)
Namespace: biological_process
Definition: The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules that contributes to the shaping of the heart.
regulation of cell adhesion involved in heart morphogenesis (GO:0061344)
Namespace: biological_process
Definition: Any process that modulates the extent of cell adhesion contributing to the shaping of the heart.
obsolete planar cell polarity pathway involved in cardiac muscle cell fate commitment (GO:0061345)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via effectors other than beta-catenin and contributing to a cardioblast being committed to a cardiac muscle cell fate.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete planar cell polarity pathway involved in heart morphogenesis (GO:0061346)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the heart.
Comment: The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
obsolete planar cell polarity pathway involved in ventricular septum morphogenesis (GO:0061348)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the ventricular septum.
Comment: The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
obsolete planar cell polarity pathway involved in cardiac right atrium morphogenesis (GO:0061349)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac right atrium.
Comment: The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (GO:0061350)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.
Comment: The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
neural precursor cell proliferation (GO:0061351)
Namespace: biological_process
Definition: The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell.
cell chemotaxis involved in Malpighian tubule morphogenesis (GO:0061352)
Namespace: biological_process
Definition: The directed movement of the outgrowing Malpighian tubule guided by specific chemical cues/signals. Movement may be towards a guidance cue (positive chemotaxis) or away from it (negative chemotaxis). Guidance contributes to the final positioning of the tubule.
obsolete BMP signaling pathway involved in Malpighian tubule cell chemotaxis (GO:0061353)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the directed movement of a Malpighian tubule cell toward a stimulus, thereby contributing to the shaping of the tubule.
Synonyms: bone morphogenic protein receptor signalling pathway involved in Malpighian tubule cell chemotaxis
Comment: This term was obsoleted because it represents a GO-CAM model.
Wnt protein secretion (GO:0061355)
Namespace: biological_process
Definition: The controlled release of a Wnt protein from a cell.
regulation of Wnt protein secretion (GO:0061356)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the controlled release of a Wnt protein from a cell.
positive regulation of Wnt protein secretion (GO:0061357)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the controlled release of a Wnt protein from a cell.
negative regulation of Wnt protein secretion (GO:0061358)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a Wnt protein from a cell.
obsolete regulation of Wnt signaling pathway by Wnt protein secretion (GO:0061359)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of the activity of the Wnt signaling pathway by the controlled release of a Wnt protein from a cell.
Synonyms: regulation of Wnt receptor signaling pathway by Wnt protein secretion; regulation of Wnt receptor signalling pathway by Wnt protein secretion; regulation of Wnt-activated signaling pathway by Wnt protein secretion
Comment: This term was obsoleted because it is a specific target of protein secretion ; GO:0009306.
positive regulation of maintenance of bipolar cell polarity regulating cell shape (GO:0061361)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of maintenance of bipolar cell polarity regulating cell shape.
negative regulation of maintenance of bipolar cell polarity regulating cell shape (GO:0061362)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of maintenance of bipolar cell polarity regulating cell shape.
obsolete negative regulation of progesterone biosynthesis involved in luteolysis (GO:0061363)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreases the rate, frequency or extent of the biosynthesis of progesterone biosynthesis that contributes to luteolysis.
Synonyms: functional luteolysis
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM.
apoptotic process involved in luteolysis (GO:0061364)
Namespace: biological_process
Definition: The apoptotic process that contributes to luteolysis.
Synonyms: apoptosis involved in luteolysis; structural luteolysis
positive regulation of triglyceride lipase activity (GO:0061365)
Namespace: biological_process
Definition: Any process that increases the activity of triglyceride lipase.
Synonyms: positive regulation of TAG activity
behavioral response to chemical pain (GO:0061366)
Namespace: biological_process
Definition: Any process that results in a change in the behaviour of an organism as a result of a chemical pain stimulus.
behavioral response to acetic acid induced pain (GO:0061367)
Namespace: biological_process
Definition: Any process that results in a change in the behaviour of an organism as a result of an acetic acid pain stimulus.
negative regulation of testicular blood vessel morphogenesis (GO:0061369)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis in the testicle.
Synonyms: negative regulation of testicular vasculature morphogenesis
testosterone biosynthetic process (GO:0061370)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of testosterone, an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4 C-5.
determination of heart left/right asymmetry (GO:0061371)
Namespace: biological_process
Definition: Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.
Synonyms: determination of cardiac left/right asymmetry
obsolete activin receptor signaling pathway involved in heart jogging (GO:0061372)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by the binding of a member of the activin family to its receptor on the surface of a target cell, and contributing to the process of heart jogging.
Synonyms: activin receptor signalling pathway involved in heart jogging
Comment: This term was obsoleted because it represents a GO-CAM model.
mammillary axonal complex development (GO:0061373)
Namespace: biological_process
Definition: The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.
mammillothalamic axonal tract development (GO:0061374)
Namespace: biological_process
Definition: The progression of the mammillothalamic axonal tract, from its formation to the mature structure. The mammillothalamic tract is the collection of axons that connects the two major subdivisions of the diencephalon (hypothalamus and thalamus) and closes the diencephalic circuit.
mammillotectal axonal tract development (GO:0061375)
Namespace: biological_process
Definition: The progression of the mammillotectal tract over time, from its formation to the mature structure. The mammillotectal tract is the collection of axons that connects the ventral diencephalon to the superior colliculus.
mammillotegmental axonal tract development (GO:0061376)
Namespace: biological_process
Definition: The process in which the mammillotegmental tract progresses over time, from its formation to the mature structure. The mammillotegmental tract is the collection of axons that connects the ventral diencephalon to the tegmentum and pons.
mammary gland lobule development (GO:0061377)
Namespace: biological_process
Definition: The progression of the mammary gland lobule over time, from its formation to the mature structure. A mammary gland lobule is a small rounded projection of the mammary gland.
corpora quadrigemina development (GO:0061378)
Namespace: biological_process
Definition: The progression of the corpora quadrigemina over time, from its formation to the mature structure. The corpora quadrigemina is a part of the midbrain that is made up of the superior and inferior colliculi.
inferior colliculus development (GO:0061379)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the inferior colliculus over time, from its formation to the mature structure. The inferior colliculus (IC) (Latin, lower hill) is the principal midbrain nucleus of the auditory pathway and receives input from several more peripheral brainstem nuclei in the auditory pathway, as well as inputs from the auditory cortex. The inferior colliculus has three subdivisions: the central nucleus (CIC), a dorsal cortex (DCIC) by which it is surrounded, and an external cortex (ICX) which is located laterally.
superior colliculus development (GO:0061380)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the superior colliculus over time, from its formation to the mature structure. The superior colliculus is also known as the optic tectum or simply tectum and is a paired structure that forms a major component of the vertebrate midbrain.
cell migration in diencephalon (GO:0061381)
Namespace: biological_process
Definition: The orderly movement of a cell that will reside in the diencephalon.
Malpighian tubule tip cell differentiation (GO:0061382)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule tip cell. A Malpighian tubule tip cell is a mitogenic signaling cell that controls the proliferation of its neighboring cells.
trabecula morphogenesis (GO:0061383)
Namespace: biological_process
Definition: The process of shaping a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.
heart trabecula morphogenesis (GO:0061384)
Namespace: biological_process
Definition: The process of shaping a trabecula in the heart. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.
obsolete fibroblast proliferation involved in heart morphogenesis (GO:0061385)
Namespace: biological_process
Definition: OBSOLETE. The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
closure of optic fissure (GO:0061386)
Namespace: biological_process
Definition: The closure of the temporary ventral gap in the optic cup that contributes to its shaping.
Synonyms: closure or choriod fissure
regulation of extent of cell growth (GO:0061387)
Namespace: biological_process
Definition: Any process that modulates the extent of cell growth.
regulation of rate of cell growth (GO:0061388)
Namespace: biological_process
Definition: Any process that modulates the rate of cell growth.
regulation of direction of cell growth (GO:0061389)
Namespace: biological_process
Definition: Any process that modulates the direction of cell growth.
positive regulation of direction of cell growth (GO:0061390)
Namespace: biological_process
Definition: Any process that increases the direction of cell growth.
obsolete regulation of transcription from RNA polymerase II promoter in response to osmotic stress (GO:0061392)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress (GO:0061393)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (GO:0061394)
Namespace: biological_process
Definition: OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (GO:0061395)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion (GO:0061396)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of transcription from RNA polymerase II promoter in response to copper ion (GO:0061397)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete negative regulation of transcription from RNA polymerase II promoter in response to copper ion (GO:0061398)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of transcription from RNA polymerase II promoter in response to cobalt ion (GO:0061399)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a cobalt ion stimulus.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of transcription from RNA polymerase II promoter in response to calcium ion (GO:0061400)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a calcium ion stimulus.
Comment: This term was obsoleted because it represents a GO-CAM model.