LiteFold/GO huggingface dataset:
vanadium ion binding (GO:0051212)
Namespace: molecular_function
Definition: Binding to a vanadium ion (V).
Synonyms: V ion binding
dioxygenase activity (GO:0051213)
Namespace: molecular_function
Definition: Catalysis of the incorporation of both atoms of molecular oxygen (O2) into the substrate.
RNAi-mediated antiviral immunity against RNA virus (GO:0051214)
Namespace: biological_process
Definition: An RNAi-mediated post-transcriptional gene silencing pathway induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL4 is the primary Dicer to detect RNA viruses.
Synonyms: RNA VIGS; RNA virus induced gene silencing; RNA virus-induced gene silencing; RNA virus-induced PTGS
RNAi-mediated antiviral immunity against DNA virus (GO:0051215)
Namespace: biological_process
Definition: An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.
Synonyms: DNA VIGS; DNA virus induced gene silencing; DNA virus-induced gene silencing; DNA virus-induced PTGS
cartilage development (GO:0051216)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a cartilage element over time, from its formation to the mature structure. Cartilage elements are skeletal elements that consist of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.
Synonyms: cartilage biogenesis; cartilage biosynthesis; cartilage element development; cartilage formation; cartilage organ development; chondrogenesis
obsolete molybdenum incorporation via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide) (GO:0051217)
Namespace: biological_process
Definition: OBSOLETE. The incorporation of molybdenum into a protein via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).
Comment: This term was obsoleted because it represents a molecular function.
obsolete tungsten incorporation via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) (GO:0051218)
Namespace: biological_process
Definition: OBSOLETE. The incorporation of tungsten into a protein via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide).
Comment: This term was obsoleted because it represents a molecular function.
phosphoprotein binding (GO:0051219)
Namespace: molecular_function
Definition: Binding to a phosphorylated protein.
Synonyms: phosphorylated protein binding
obsolete cytoplasmic sequestering of protein (GO:0051220)
Namespace: biological_process
Definition: OBSOLETE. The selective interaction of a protein with specific molecules in the cytoplasm, thereby inhibiting its transport into other areas of the cell.
Synonyms: cytoplasmic retention of protein; cytoplasmic sequestration of protein; cytoplasmic storage of protein; maintenance of protein location in cytoplasm; retention of protein in cytoplasm; sequestering of protein in cytoplasm; sequestration of protein in cytoplasm; storage of protein in cytoplasm
Comment: The reason for obsoletion is that this term represents a molecular function, not a biological process.
obsolete tungsten incorporation into metallo-sulfur cluster (GO:0051221)
Namespace: biological_process
Definition: OBSOLETE. The incorporation of tungsten into a metallo-sulfur cluster.
Synonyms: tungsten incorporation into metallo-sulphur cluster
Comment: This term was obsoleted because it represents a molecular function.
positive regulation of protein transport (GO:0051222)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: activation of protein transport; stimulation of protein transport; up regulation of protein transport; up-regulation of protein transport; upregulation of protein transport
regulation of protein transport (GO:0051223)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
negative regulation of protein transport (GO:0051224)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: down regulation of protein transport; down-regulation of protein transport; downregulation of protein transport; inhibition of protein transport
spindle assembly (GO:0051225)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.
Synonyms: bipolar spindle biosynthesis; bipolar spindle formation; spindle biosynthesis; spindle formation
mitotic spindle disassembly (GO:0051228)
Namespace: biological_process
Definition: The controlled breakdown of the spindle during a mitotic cell cycle.
Synonyms: mitotic spindle breakdown; mitotic spindle catabolism; mitotic spindle degradation; spindle breakdown during mitosis; spindle degradation during mitosis; spindle disassembly during mitosis
meiotic spindle disassembly (GO:0051229)
Namespace: biological_process
Definition: The controlled breakdown of the spindle during a meiotic cell cycle.
Synonyms: meiotic spindle breakdown; meiotic spindle catabolism; meiotic spindle degradation; spindle breakdown during meiosis; spindle degradation during meiosis; spindle disassembly during meiosis
spindle disassembly (GO:0051230)
Namespace: biological_process
Definition: The controlled breakdown of the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.
Synonyms: spindle breakdown; spindle catabolism; spindle degradation
spindle elongation (GO:0051231)
Namespace: biological_process
Definition: The cell cycle process in which the distance is lengthened between poles of the spindle.
meiotic spindle elongation (GO:0051232)
Namespace: biological_process
Definition: The lengthening of the distance between poles of the spindle during a meiotic cell cycle.
Synonyms: spindle elongation during meiosis
spindle midzone (GO:0051233)
Namespace: cellular_component
Definition: The area in the center of the spindle where the spindle microtubules from opposite poles overlap.
Synonyms: central spindle; spindle equator
establishment of localization (GO:0051234)
Namespace: biological_process
Definition: Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation.
Synonyms: establishment of localisation
maintenance of location (GO:0051235)
Namespace: biological_process
Definition: Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.
Synonyms: maintenance of localization; retention; sequestering; storage
establishment of RNA localization (GO:0051236)
Namespace: biological_process
Definition: The directed movement of RNA to a specific location.
Synonyms: establishment of RNA localisation; RNA positioning; RNA recruitment
maintenance of RNA location (GO:0051237)
Namespace: biological_process
Definition: Any process in which RNA is maintained in a location and prevented from moving elsewhere.
Synonyms: maintenance of RNA localization; RNA retention
obsolete sequestering of metal ion (GO:0051238)
Namespace: biological_process
Definition: OBSOLETE. The process of binding or confining metal ions such that they are separated from other components of a biological system.
Synonyms: metal ion retention; metal ion sequestering; metal ion sequestration; metal ion storage; retention of metal ion; sequestration of metal ion; storage of metal ion
Comment: The reason for obsoletion is that this term represents a molecular function, not a biological process.
regulation of multicellular organismal process (GO:0051239)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs.
positive regulation of multicellular organismal process (GO:0051240)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of an organismal process, any of the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs.
Synonyms: activation of multicellular organismal process; stimulation of multicellular organismal process; up regulation of multicellular organismal process; up-regulation of multicellular organismal process; upregulation of multicellular organismal process
negative regulation of multicellular organismal process (GO:0051241)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of an organismal process, the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs.
Synonyms: down regulation of multicellular organismal process; down-regulation of multicellular organismal process; downregulation of multicellular organismal process; inhibition of multicellular organismal process
negative regulation of cellular defense response (GO:0051245)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the rate of the cellular defense response.
Synonyms: down regulation of cellular defense response; down-regulation of cellular defense response; downregulation of cellular defense response; inhibition of cellular defense response; negative regulation of cellular defence response
regulation of protein metabolic process (GO:0051246)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein.
Synonyms: regulation of cellular protein metabolic process; regulation of cellular protein metabolism; regulation of protein metabolism
positive regulation of protein metabolic process (GO:0051247)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein.
Synonyms: activation of cellular protein metabolic process; activation of protein metabolic process; positive regulation of cellular protein metabolic process; positive regulation of cellular protein metabolism; positive regulation of protein metabolism; stimulation of cellular protein metabolic process; stimulation of protein metabolic process; up regulation of cellular protein metabolic process; up regulation of protein metabolic process; up-regulation of cellular protein metabolic process; up-regulation of protein metabolic process; upregulation of cellular protein metabolic process; upregulation of protein metabolic process
negative regulation of protein metabolic process (GO:0051248)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving a protein.
Synonyms: down regulation of cellular protein metabolic process; down regulation of protein metabolic process; down-regulation of cellular protein metabolic process; down-regulation of protein metabolic process; downregulation of cellular protein metabolic process; downregulation of protein metabolic process; inhibition of cellular protein metabolic process; inhibition of protein metabolic process; negative regulation of cellular protein metabolic process; negative regulation of cellular protein metabolism; negative regulation of protein metabolism
regulation of lymphocyte activation (GO:0051249)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of lymphocyte activation.
negative regulation of lymphocyte activation (GO:0051250)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte activation.
Synonyms: down regulation of lymphocyte activation; down-regulation of lymphocyte activation; downregulation of lymphocyte activation; inhibition of lymphocyte activation
positive regulation of lymphocyte activation (GO:0051251)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of lymphocyte activation.
Synonyms: activation of lymphocyte activation; stimulation of lymphocyte activation; up regulation of lymphocyte activation; up-regulation of lymphocyte activation; upregulation of lymphocyte activation
regulation of RNA metabolic process (GO:0051252)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA.
Synonyms: regulation of RNA metabolism
negative regulation of RNA metabolic process (GO:0051253)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA.
Synonyms: down regulation of RNA metabolic process; down-regulation of RNA metabolic process; downregulation of RNA metabolic process; inhibition of RNA metabolic process; negative regulation of RNA metabolism
spindle midzone assembly (GO:0051255)
Namespace: biological_process
Definition: The cell cycle process in which aggregation, arrangement and bonding together of a set of components to form the spindle midzone. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.
Synonyms: spindle midzone biogenesis; spindle midzone biosynthesis; spindle midzone formation
mitotic spindle midzone assembly (GO:0051256)
Namespace: biological_process
Definition: The cell cycle process in which the aggregation, arrangement and bonding together of a set of components forms the spindle midzone.
Synonyms: mitotic spindle midzone biogenesis; mitotic spindle midzone biosynthesis; mitotic spindle midzone formation; spindle midzone assembly involved in mitosis; spindle midzone biogenesis involved in mitosis; spindle midzone formation involved in mitosis
protein polymerization (GO:0051258)
Namespace: biological_process
Definition: The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
Synonyms: protein polymer biosynthesis; protein polymer biosynthetic process; protein polymer formation
protein complex oligomerization (GO:0051259)
Namespace: biological_process
Definition: The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
Synonyms: protein multimerization; protein oligomer assembly; protein oligomer biosynthesis; protein oligomer biosynthetic process; protein oligomer formation; protein oligomerization
protein homooligomerization (GO:0051260)
Namespace: biological_process
Definition: The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
Synonyms: protein homooligomer assembly; protein homooligomer biosynthesis; protein homooligomer biosynthetic process; protein homooligomer formation; protein homooligomerization activity
protein depolymerization (GO:0051261)
Namespace: biological_process
Definition: The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein.
Synonyms: protein polymer breakdown; protein polymer catabolic process; protein polymer catabolism; protein polymer degradation
protein tetramerization (GO:0051262)
Namespace: biological_process
Definition: The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits.
Synonyms: protein tetramer assembly; protein tetramer biosynthesis; protein tetramer biosynthetic process; protein tetramer formation
obsolete microcin E492 biosynthetic process by siderophore ester modification of peptidyl-serine (GO:0051263)
Namespace: biological_process
Definition: OBSOLETE. The modification of serine to N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine as found in microcin E492 produced from the mceA gene in plasmid pJAM229 of the E. coli VCS257 strain and the K. pneumoniae RYC492 strain.
Synonyms: microcin E492 anabolism by siderophore ester modification of peptidyl-serine; microcin E492 formation by siderophore ester modification of peptidyl-serine; microcin E492 synthesis by siderophore ester modification of peptidyl-serine
Comment: This term was obsoleted because it represents a molecular function.
mono-olein transacylation activity (GO:0051264)
Namespace: molecular_function
Definition: Catalysis of the reaction: mono-olein + mono-olein = diolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol.
Synonyms: acyl-CoA-independent mono-olein transacylation; MOG transacylation; mono-oleoylglycerol O-acyltransferase activity; mono-oleoylglycerol transacylase activity; monoolein transacylation; monooleoylglycerol O-acyltransferase activity; monooleoylglycerol transacylase activity
diolein transacylation activity (GO:0051265)
Namespace: molecular_function
Definition: Catalysis of the reaction: diolein + mono-olein = triolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol, and triolein as trioleoylglycerol and olein.
Synonyms: acyl-CoA-independent diolein transacylation; dioleoylglycerol O-acyltransferase activity; dioleoylglycerol transacylase activity; DOG transacylation
sirohydrochlorin ferrochelatase activity (GO:0051266)
Namespace: molecular_function
Definition: Catalysis of the reaction: siroheme + 2 H+ = Fe(2+) + sirohydrochlorin.
Synonyms: siroheme ferro-lyase (sirohydrochlorin-forming); siroheme synthase activity; sirohydrochlorin ferro-lyase activity
obsolete CP2 mannose-ethanolamine phosphotransferase activity (GO:0051267)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: ethanolamine phosphate + Man-alpha-(1,2)-Man-alpha-(1,2)-Man-alpha-(1,6)-R = Man-alpha-(1,2)-Man-alpha-6-P-EtN-(1,2)-Man-alpha-(1,6)-R; R is Man-alpha(1,4)-GlcNH2-inositol-phosphate-lipid. This reaction is the transfer of ethanolamine phosphate to C6 of second mannose in the GPI lipid precursor CP2.
Synonyms: addition of ethanolamine phosphate to mannose of GPI precursor CP2; CP2 ethanolamine phosphate transferase activity; CP2 EtN-P transferase activity; CP2 phosphoethanolamine transferase activity; gpi7 activity
Comment: This term was obsoleted because it represents the same process as its parent, mannose-ethanolamine phosphotransferase activity ; GO:0051377.
alpha-keto amide reductase activity (GO:0051268)
Namespace: molecular_function
Definition: Catalysis of the reaction: alpha-keto amide + 2 H+ (from donor) = (R)-hydroxy amide. Alpha-keto amides are of the form R-CO-CONH2, where R may be aromatic or aliphatic.
alpha-ketoester reductase (NADPH) activity (GO:0051269)
Namespace: molecular_function
Definition: Catalysis of the reaction: alpha-ketoester + H+ + NADPH = (R)-hydroxy ester + NADP+.
obsolete regulation of cellular component movement (GO:0051270)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a cellular component.
Synonyms: regulation of cell movement; regulation of cellular component motion
Comment: This term was obsoleted because it was not a useful grouping class since it mixed both cell and cellular component terms.
obsolete negative regulation of cellular component movement (GO:0051271)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of a cellular component.
Synonyms: negative regulation of cellular component motion
Comment: This term was obsoleted because it was not a useful grouping class since it mixed both cell and cellular component terms.
obsolete positive regulation of cellular component movement (GO:0051272)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.
Synonyms: positive regulation of cellular component motion
Comment: This term was obsoleted because it was not a useful grouping class since it mixed both cell and cellular component terms.
beta-glucan metabolic process (GO:0051273)
Namespace: biological_process
Definition: The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds.
Synonyms: beta-glucan metabolism
beta-glucan biosynthetic process (GO:0051274)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of beta-glucans.
Synonyms: beta-glucan anabolism; beta-glucan biosynthesis; beta-glucan formation; beta-glucan synthesis
chromosome organization (GO:0051276)
Namespace: biological_process
Definition: A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome.
Synonyms: chromosome organisation; chromosome organization and biogenesis; DNA condensation; DNA packaging; maintenance of genome integrity; nuclear genome maintenance
fungal-type cell wall polysaccharide biosynthetic process (GO:0051278)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of the polysaccharides which make up the fungal-type cell wall.
Synonyms: cell wall polysaccharide anabolism; cell wall polysaccharide formation; cell wall polysaccharide synthesis; chitin- and beta-glucan-containing cell wall polysaccharide biosynthetic process
regulation of release of sequestered calcium ion into cytosol (GO:0051279)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.
Synonyms: regulation of calcium ion (Ca2+) mobilization; regulation of calcium mobilization; regulation of cytoplasmic release of sequestered calcium ion (Ca2+); regulation of cytoplasmic release of stored calcium ion (Ca2+); regulation of release of sequestered calcium ion (Ca2+); regulation of release of stored calcium ion (Ca2+); regulation of release of stored calcium ion (Ca2+) into cytoplasm; regulation of release of stored calcium ion (Ca2+) into cytosol