LiteFold/GO huggingface dataset:
endocytic recycling (GO:0032456)
Namespace: biological_process
Definition: The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins.
Synonyms: retrograde transport of endocytic vesicles; retrograde transport, endosome to plasma membrane
fast endocytic recycling (GO:0032457)
Namespace: biological_process
Definition: The directed movement of membrane-bounded vesicles from peripheral endocytic compartments back to the plasma membrane where they are recycled for further rounds of transport.
Synonyms: direct endocytic recycling
slow endocytic recycling (GO:0032458)
Namespace: biological_process
Definition: The directed movement of membrane-bounded vesicles from deep (non-peripheral) compartments endocytic compartments back to the plasma membrane where they are recycled for further rounds of transport.
regulation of protein oligomerization (GO:0032459)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of protein oligomerization.
negative regulation of protein oligomerization (GO:0032460)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.
Synonyms: down regulation of protein oligomerization; down-regulation of protein oligomerization; downregulation of protein oligomerization; inhibition of protein oligomerization
positive regulation of protein oligomerization (GO:0032461)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of protein oligomerization.
Synonyms: activation of protein oligomerization; induction of protein oligomerization; stimulation of protein oligomerization; up regulation of protein oligomerization; up-regulation of protein oligomerization; upregulation of protein oligomerization
negative regulation of protein homooligomerization (GO:0032463)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of protein homooligomerization.
Synonyms: down regulation of protein homooligomerization; down-regulation of protein homooligomerization; downregulation of protein homooligomerization; inhibition of protein homooligomerization
positive regulation of protein homooligomerization (GO:0032464)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of protein homooligomerization.
Synonyms: activation of protein homooligomerization; induction of protein homooligomerization; stimulation of protein homooligomerization; up regulation of protein homooligomerization; up-regulation of protein homooligomerization; upregulation of protein homooligomerization
regulation of cytokinesis (GO:0032465)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells.
Synonyms: regulation of cell cycle cytokinesis
negative regulation of cytokinesis (GO:0032466)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.
Synonyms: down regulation of cytokinesis; down-regulation of cytokinesis; downregulation of cytokinesis; inhibition of cytokinesis; negative regulation of cell cycle cytokinesis
positive regulation of cytokinesis (GO:0032467)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.
Synonyms: activation of cytokinesis; positive regulation of cell cycle cytokinesis; stimulation of cytokinesis; up regulation of cytokinesis; up-regulation of cytokinesis; upregulation of cytokinesis
Golgi calcium ion homeostasis (GO:0032468)
Namespace: biological_process
Definition: Any process involved in the maintenance of an internal steady state of calcium ions within the Golgi apparatus of a cell or between the Golgi and its surroundings.
Synonyms: calcium ion homeostasis in Golgi; Golgi calcium ion concentration regulation; regulation of calcium ion concentration in Golgi; regulation of Golgi calcium ion concentration
endoplasmic reticulum calcium ion homeostasis (GO:0032469)
Namespace: biological_process
Definition: Any process involved in the maintenance of an internal steady state of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings.
Synonyms: calcium ion homeostasis in endoplasmic reticulum; calcium ion homeostasis in ER; endoplasmic reticulum calcium ion concentration regulation; ER calcium ion concentration regulation; ER calcium ion homeostasis; regulation of calcium ion concentration in endoplasmic reticulum; regulation of calcium ion concentration in ER; regulation of endoplasmic reticulum calcium ion concentration; regulation of ER calcium ion concentration
positive regulation of endoplasmic reticulum calcium ion concentration (GO:0032470)
Namespace: biological_process
Definition: Any process that increases the concentration of calcium ions in the endoplasmic reticulum.
Synonyms: elevation of calcium ion concentration in endoplasmic reticulum; elevation of endoplasmic reticulum calcium ion concentration; elevation of ER calcium ion concentration; endoplasmic reticulum calcium ion concentration elevation
negative regulation of endoplasmic reticulum calcium ion concentration (GO:0032471)
Namespace: biological_process
Definition: Any process that decreases the concentration of calcium ions in the endoplasmic reticulum.
Synonyms: endoplasmic reticulum calcium ion concentration reduction; ER calcium ion concentration reduction; reduction of calcium ion concentration in endoplasmic reticulum; reduction of calcium ion concentration in ER; reduction of endoplasmic reticulum calcium ion concentration; reduction of ER calcium ion concentration
Golgi calcium ion transport (GO:0032472)
Namespace: biological_process
Definition: The directed movement of calcium ions (Ca2+) into, out of or within the Golgi apparatus.
Synonyms: Golgi calcium transport
otolith morphogenesis (GO:0032474)
Namespace: biological_process
Definition: The process in which the anatomical structures of an otolith are generated and organized.
otolith formation (GO:0032475)
Namespace: biological_process
Definition: The process that gives rise to an otolith. This process pertains to the initial formation of a structure from unspecified parts.
polyprenyl diphosphate synthase complex (GO:0032476)
Namespace: cellular_component
Definition: A complex that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms.
Synonyms: decaprenyl diphosphate synthase complex
homodimeric polyprenyl diphosphate synthase complex (GO:0032477)
Namespace: cellular_component
Definition: A homodimeric complex that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms.
Synonyms: homodimeric decaprenyl diphosphate synthase complex
heterotetrameric polyprenyl diphosphate synthase complex (GO:0032478)
Namespace: cellular_component
Definition: A heterotetrameric complex located in the mitochondrial inner membrane that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms. In S. pombe it is a heterotetramer of Dlp1 and Dps1.
Synonyms: heterotetrameric decaprenyl diphosphate synthase complex
regulation of type I interferon production (GO:0032479)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.
Synonyms: regulation of type I IFN production
negative regulation of type I interferon production (GO:0032480)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.
Synonyms: down regulation of type I interferon production; down-regulation of type I interferon production; downregulation of type I interferon production; inhibition of type I interferon production; negative regulation of type I IFN production
Rab protein signal transduction (GO:0032482)
Namespace: biological_process
Definition: An intracellular signaling cassette in which a small monomeric GTPase of the Rab subfamily relays a signal.
regulation of Rab protein signal transduction (GO:0032483)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of Rab protein signal transduction.
Ral protein signal transduction (GO:0032484)
Namespace: biological_process
Definition: An intracellular signaling cassette in which a small monomeric GTPase of the RaI subfamily relays a signal.
regulation of Ral protein signal transduction (GO:0032485)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of Ral protein signal transduction.
Rap protein signal transduction (GO:0032486)
Namespace: biological_process
Definition: An intracellular signaling cassette in which a small monomeric GTPase of the Rap subfamily relays a signal.
regulation of Rap protein signal transduction (GO:0032487)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of Rap protein signal transduction.
regulation of Cdc42 protein signal transduction (GO:0032489)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of Cdc42 protein signal transduction.
detection of molecule of bacterial origin (GO:0032490)
Namespace: biological_process
Definition: The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.
Synonyms: detection of bacteria associated molecule; detection of bacterial associated molecule; detection of bacterium associated molecule
detection of molecule of fungal origin (GO:0032491)
Namespace: biological_process
Definition: The series of events in which a stimulus from a molecule of fungal origin is received and converted into a molecular signal.
Synonyms: detection of fungal associated molecule; detection of fungus associated molecule
response to bacterial lipoprotein (GO:0032493)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.
response to peptidoglycan (GO:0032494)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.
response to muramyl dipeptide (GO:0032495)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan.
response to lipopolysaccharide (GO:0032496)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms: response to endotoxin; response to LPS
detection of lipopolysaccharide (GO:0032497)
Namespace: biological_process
Definition: The series of events in which a lipopolysaccharide stimulus is received by a cell and converted into a molecular signal. Lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms: detection of LPS
detection of muramyl dipeptide (GO:0032498)
Namespace: biological_process
Definition: The series of events in which a muramyl dipeptide stimulus is received by a cell and converted into a molecular signal. Muramyl dipeptide is derived from peptidoglycan.
muramyl dipeptide binding (GO:0032500)
Namespace: molecular_function
Definition: Interacting selectively and non-covalently, in a non-covalent manner, with muramyl dipeptide; muramyl dipeptide is derived from peptidoglycan.
developmental process (GO:0032502)
Namespace: biological_process
Definition: A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.
Synonyms: development; single-organism developmental process
obsolete multicellular organism reproduction (GO:0032504)
Namespace: biological_process
Definition: OBSOLETE. The biological process in which new individuals are produced by one or two multicellular organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.
Comment: The reason for obsoletion is that this term is equivalent to multicellular organismal reproductive process.
obsolete reproduction of a single-celled organism (GO:0032505)
Namespace: biological_process
Definition: OBSOLETE. The biological process in which new individuals are produced by one or two single-celled organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.
Comment: The reason for obsoletion is that this term is equivalent to reproductive process in single-celled organism.
cytokinetic process (GO:0032506)
Namespace: biological_process
Definition: A cellular process that is involved in cytokinesis (the division of the cytoplasm of a cell and its separation into two daughter cells).
maintenance of protein location in cell (GO:0032507)
Namespace: biological_process
Definition: Any process in which a protein is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.
Synonyms: maintenance of protein localization in cell
obsolete DNA duplex unwinding (GO:0032508)
Namespace: biological_process
Definition: OBSOLETE. The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.
Synonyms: DNA unwinding; duplex DNA melting
Comment: Note that this term refers to a geometric change in DNA conformation, and should not be confused with 'DNA topological change ; GO:0006265'.\nThe reason for obsoletion is that the term represents a molecular function.
endosome transport via multivesicular body sorting pathway (GO:0032509)
Namespace: biological_process
Definition: The directed movement of substances from endosomes to lysosomes or vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the target compartment.
Synonyms: endosome transport via MVB sorting pathway
endosome to lysosome transport via multivesicular body sorting pathway (GO:0032510)
Namespace: biological_process
Definition: The directed movement of substances from endosomes to lysosomes by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the lysosome.
Synonyms: endosome to lysosome transport via MVB sorting pathway
late endosome to vacuole transport via multivesicular body sorting pathway (GO:0032511)
Namespace: biological_process
Definition: The directed movement of substances from endosomes to vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the vacuole.
Synonyms: endosome to vacuole transport via MVB sorting pathway
obsolete negative regulation of phosphoprotein phosphatase activity (GO:0032515)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops or reduces the activity of a phosphoprotein phosphatase.
Synonyms: down regulation of calcineurin activity; down regulation of phosphoprotein phosphatase activity; down regulation of protein phosphatase 2 activity; down regulation of protein phosphatase 3 activity; down regulation of protein phosphatase type 2A activity; down regulation of protein phosphatase type 2B activity; down-regulation of phosphoprotein phosphatase activity; down-regulation of protein phosphatase type 2A activity; down-regulation of protein phosphatase type 2B activity; downregulation of calcineurin activity; downregulation of phosphoprotein phosphatase activity; downregulation of protein phosphatase 2 activity; downregulation of protein phosphatase 3 activity; downregulation of protein phosphatase type 2A activity; downregulation of protein phosphatase type 2B activity; inhibition of calcineurin activity; inhibition of phosphoprotein phosphatase activity; inhibition of protein phosphatase 2 activity; inhibition of protein phosphatase 3 activity; inhibition of protein phosphatase type 2A activity; inhibition of protein phosphatase type 2B activity; negative regulation of calcineurin activity; negative regulation of protein phosphatase 2 activity; negative regulation of protein phosphatase type 2A activity; negative regulation of protein phosphatase type 2B activity; regulation of protein phosphatase 3 activity
Comment: The reason for obsoletion is that this term represents a single-step process (regulation of MF).
obsolete positive regulation of phosphoprotein phosphatase activity (GO:0032516)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the activity of a phosphoprotein phosphatase.
Synonyms: activation of calcineurin activity; activation of phosphoprotein phosphatase activity; activation of protein phosphatase 3 activity; activation of protein phosphatase type 2A activity; activation of protein phosphatase type 2B activity; calcineurin activation; positive regulation of calcineurin activity; positive regulation of protein phosphatase 2 activity; positive regulation of protein phosphatase 3 activity; positive regulation of protein phosphatase type 2A activity; positive regulation of protein phosphatase type 2B activity; stimulation of phosphoprotein phosphatase activity; stimulation of protein phosphatase 2 activity; stimulation of protein phosphatase type 2A activity; stimulation of protein phosphatase type 2B activity; up regulation of calcineurin activity; up regulation of phosphoprotein phosphatase activity; up regulation of protein phosphatase 2 activity; up regulation of protein phosphatase 3 activity; up regulation of protein phosphatase type 2A activity; up regulation of protein phosphatase type 2B activity; up-regulation of phosphoprotein phosphatase activity; up-regulation of protein phosphatase 2 activity; up-regulation of protein phosphatase type 2A activity; up-regulation of protein phosphatase type 2B activity; upregulation of phosphoprotein phosphatase activity; upregulation of protein phosphatase 2 activity; upregulation of protein phosphatase type 2A activity; upregulation of protein phosphatase type 2B activity
Comment: The reason for obsoletion is that this term represents a single-step process (regulation of MF).
SOD1-calcineurin complex (GO:0032517)
Namespace: cellular_component
Definition: A protein complex formed by the association of superoxide dismutase 1 (SOD1) with calcineurin; complex formation is implicated in activation of calcineurin by SOD1.
silicon efflux transmembrane transporter activity (GO:0032523)
Namespace: molecular_function
Definition: Enables the transfer of silicon from the inside of the cell to the outside of the cell across a membrane.
Synonyms: silicon efflux transporter activity
obsolete nutrient export (GO:0032524)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of nutrients out of a cell or organelle.
Synonyms: nutrient export
Comment: This term was made obsolete because "nutrient" is not defined, and does not have a consistent meaning.
protein exit from endoplasmic reticulum (GO:0032527)
Namespace: biological_process
Definition: The directed movement of proteins from the endoplasmic reticulum.
Synonyms: protein exit from ER; protein export from endoplasmic reticulum; protein export from ER
microvillus organization (GO:0032528)
Namespace: biological_process
Definition: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.
Synonyms: microvillus organisation; microvillus organization and biogenesis
follicle cell microvillus organization (GO:0032529)
Namespace: biological_process
Definition: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus on a follicle cell. A microvillus is a thin cylindrical membrane-covered projection on the surface of an animal cell containing a core bundle of actin filaments.
Synonyms: follicle cell microvillus organisation; follicle cell microvillus organization and biogenesis
regulation of microvillus organization (GO:0032530)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus.
Synonyms: regulation of microvillus organisation; regulation of microvillus organization and biogenesis
regulation of follicle cell microvillus organization (GO:0032531)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus on a follicle cell.
Synonyms: regulation of follicle cell microvillus organisation; regulation of follicle cell microvillus organization and biogenesis
regulation of microvillus length (GO:0032532)
Namespace: biological_process
Definition: A process that modulates the length of a microvillus.
regulation of follicle cell microvillus length (GO:0032533)
Namespace: biological_process
Definition: A process that modulates the length of a microvillus on a follicle cell.
regulation of microvillus assembly (GO:0032534)
Namespace: biological_process
Definition: A process that modulates the formation of a microvillus.
Synonyms: regulation of microvillus biogenesis
regulation of cellular component size (GO:0032535)
Namespace: biological_process
Definition: A process that modulates the size of a cellular component.
regulation of cell projection size (GO:0032536)
Namespace: biological_process
Definition: A process that modulates the size of a cell projection.
host-seeking behavior (GO:0032537)
Namespace: biological_process
Definition: The specific behavior of an organism that are associated with finding a host organism; may include behavioral responses to light, temperature, or chemical emanations from the prospective host.
Synonyms: host-seeking behaviour
negative regulation of host-seeking behavior (GO:0032539)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of any behavior associated with finding a host organism.
Synonyms: down regulation of host-seeking behavior; down-regulation of host-seeking behavior; downregulation of host-seeking behavior; inhibition of host-seeking behavior; negative regulation of host-seeking behaviour