LiteFold/GO huggingface dataset:
obsolete regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (GO:1902162)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.
Comment: The reason for obsoletion is that this term is about down stream effects, not the signaling pathway itself.
obsolete negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (GO:1902163)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.
Synonyms: down regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; downregulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; inhibition of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
Comment: The reason for obsoletion is that this term is about down stream effects, not the signaling pathway itself.
obsolete positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (GO:1902164)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.
Synonyms: activation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; up regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; upregulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
Comment: The reason for obsoletion is that this term is about down stream effects, not the signaling pathway itself.
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:1902166)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.
Synonyms: down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:1902167)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.
Synonyms: activation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; activation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; up regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; up regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; upregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; upregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
response to catechin (GO:1902168)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.
cellular response to reactive nitrogen species (GO:1902170)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive nitrogen species stimulus.
regulation of tocopherol cyclase activity (GO:1902171)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of tocopherol cyclase activity.
negative regulation of keratinocyte apoptotic process (GO:1902173)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte apoptotic process.
Synonyms: down regulation of keratinocyte apoptosis; down regulation of keratinocyte apoptotic process; down-regulation of keratinocyte apoptosis; down-regulation of keratinocyte apoptotic process; downregulation of keratinocyte apoptosis; downregulation of keratinocyte apoptotic process; inhibition of keratinocyte apoptosis; inhibition of keratinocyte apoptotic process; negative regulation of keratinocyte apoptosis
positive regulation of keratinocyte apoptotic process (GO:1902174)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of keratinocyte apoptotic process.
Synonyms: activation of keratinocyte apoptosis; activation of keratinocyte apoptotic process; positive regulation of keratinocyte apoptosis; up regulation of keratinocyte apoptosis; up regulation of keratinocyte apoptotic process; up-regulation of keratinocyte apoptosis; up-regulation of keratinocyte apoptotic process; upregulation of keratinocyte apoptosis; upregulation of keratinocyte apoptotic process
regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (GO:1902175)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.
Synonyms: regulation of intrinsic apoptotic signaling pathway in response to oxidative stress
positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (GO:1902177)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.
Synonyms: activation of intrinsic apoptotic signaling pathway in response to oxidative stress; positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress; up regulation of intrinsic apoptotic signaling pathway in response to oxidative stress; up-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress; upregulation of intrinsic apoptotic signaling pathway in response to oxidative stress
obsolete verruculogen metabolic process (GO:1902179)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving verruculogen.
Synonyms: verruculogen metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
obsolete verruculogen catabolic process (GO:1902180)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the breakdown of verruculogen.
Synonyms: verruculogen breakdown; verruculogen catabolism; verruculogen degradation
Comment: This term was obsoleted because there is no evidence that this process exists.
verruculogen biosynthetic process (GO:1902181)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of verruculogen.
Synonyms: verruculogen anabolism; verruculogen biosynthesis; verruculogen formation; verruculogen synthesis
shoot apical meristem development (GO:1902182)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a shoot apical meristem over time, from its formation to the mature structure.
Synonyms: primary shoot meristem development; promeristem development; SAM development
regulation of shoot apical meristem development (GO:1902183)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of shoot apical meristem development.
Synonyms: regulation of primary shoot meristem development; regulation of promeristem development; regulation of SAM development
negative regulation of shoot apical meristem development (GO:1902184)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of shoot apical meristem development.
Synonyms: down regulation of primary shoot meristem development; down regulation of promeristem development; down regulation of SAM development; down regulation of shoot apical meristem development; down-regulation of primary shoot meristem development; down-regulation of promeristem development; down-regulation of SAM development; down-regulation of shoot apical meristem development; downregulation of primary shoot meristem development; downregulation of promeristem development; downregulation of SAM development; downregulation of shoot apical meristem development; inhibition of primary shoot meristem development; inhibition of promeristem development; inhibition of SAM development; inhibition of shoot apical meristem development; negative regulation of primary shoot meristem development; negative regulation of promeristem development; negative regulation of SAM development
positive regulation of shoot apical meristem development (GO:1902185)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of shoot apical meristem development.
Synonyms: activation of primary shoot meristem development; activation of promeristem development; activation of SAM development; activation of shoot apical meristem development; positive regulation of primary shoot meristem development; positive regulation of promeristem development; positive regulation of SAM development; up regulation of primary shoot meristem development; up regulation of promeristem development; up regulation of SAM development; up regulation of shoot apical meristem development; up-regulation of primary shoot meristem development; up-regulation of promeristem development; up-regulation of SAM development; up-regulation of shoot apical meristem development; upregulation of primary shoot meristem development; upregulation of promeristem development; upregulation of SAM development; upregulation of shoot apical meristem development
obsolete regulation of viral release from host cell (GO:1902186)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of viral release from host cell.
Synonyms: regulation of release of virus from host; regulation of viral exit; regulation of viral release; regulation of viral shedding
Comment: This term was obsoleted because there is no evidence that it is a regulated process.
obsolete positive regulation of viral release from host cell (GO:1902188)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.
Synonyms: activation of release of virus from host; activation of viral exit; activation of viral release; activation of viral release from host cell; activation of viral shedding; positive regulation of release of virus from host; positive regulation of viral exit; positive regulation of viral release; positive regulation of viral shedding; up regulation of release of virus from host; up regulation of viral exit; up regulation of viral release; up regulation of viral release from host cell; up regulation of viral shedding; up-regulation of release of virus from host; up-regulation of viral exit; up-regulation of viral release; up-regulation of viral release from host cell; up-regulation of viral shedding; upregulation of release of virus from host; upregulation of viral exit; upregulation of viral release; upregulation of viral release from host cell; upregulation of viral shedding
Comment: This term was obsoleted because there is no evidence that it is a regulated process.
2-methylbutanoyl-CoA(4-) catabolic process (GO:1902190)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of 2-methylbutanoyl-CoA(4-).
Synonyms: 2-methylbutanoyl-CoA(4-) breakdown; 2-methylbutanoyl-CoA(4-) catabolism; 2-methylbutanoyl-CoA(4-) degradation
2-methylbutanoyl-CoA(4-) biosynthetic process (GO:1902191)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 2-methylbutanoyl-CoA(4-).
Synonyms: 2-methylbutanoyl-CoA(4-) anabolism; 2-methylbutanoyl-CoA(4-) biosynthesis; 2-methylbutanoyl-CoA(4-) formation; 2-methylbutanoyl-CoA(4-) synthesis
2-methylbut-2-enoyl-CoA(4-) metabolic process (GO:1902192)
Namespace: biological_process
Definition: The chemical reactions and pathways involving 2-methylbut-2-enoyl-CoA(4-).
Synonyms: 2-methylbut-2-enoyl-CoA(4-) metabolism
2-methylbut-2-enoyl-CoA(4-) catabolic process (GO:1902193)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of 2-methylbut-2-enoyl-CoA(4-).
Synonyms: 2-methylbut-2-enoyl-CoA(4-) breakdown; 2-methylbut-2-enoyl-CoA(4-) catabolism; 2-methylbut-2-enoyl-CoA(4-) degradation
2-methylbut-2-enoyl-CoA(4-) biosynthetic process (GO:1902194)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 2-methylbut-2-enoyl-CoA(4-).
Synonyms: 2-methylbut-2-enoyl-CoA(4-) anabolism; 2-methylbut-2-enoyl-CoA(4-) biosynthesis; 2-methylbut-2-enoyl-CoA(4-) formation; 2-methylbut-2-enoyl-CoA(4-) synthesis
obsolete isovaleryl-CoA(4-) metabolic process (GO:1902195)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving isovaleryl-CoA(4-).
Synonyms: isovaleryl-CoA(4-) metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
isovaleryl-CoA(4-) catabolic process (GO:1902196)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of isovaleryl-CoA(4-).
Synonyms: isovaleryl-CoA(4-) breakdown; isovaleryl-CoA(4-) catabolism; isovaleryl-CoA(4-) degradation
isovaleryl-CoA(4-) biosynthetic process (GO:1902197)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of isovaleryl-CoA(4-).
Synonyms: isovaleryl-CoA(4-) anabolism; isovaleryl-CoA(4-) biosynthesis; isovaleryl-CoA(4-) formation; isovaleryl-CoA(4-) synthesis
3-methylbut-2-enoyl-CoA(4-) metabolic process (GO:1902198)
Namespace: biological_process
Definition: The chemical reactions and pathways involving 3-methylbut-2-enoyl-CoA(4-).
Synonyms: 3-methylbut-2-enoyl-CoA(4-) metabolism
3-methylbut-2-enoyl-CoA(4-) catabolic process (GO:1902199)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of 3-methylbut-2-enoyl-CoA(4-).
Synonyms: 3-methylbut-2-enoyl-CoA(4-) breakdown; 3-methylbut-2-enoyl-CoA(4-) catabolism; 3-methylbut-2-enoyl-CoA(4-) degradation
3-methylbut-2-enoyl-CoA(4-) biosynthetic process (GO:1902200)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 3-methylbut-2-enoyl-CoA(4-).
Synonyms: 3-methylbut-2-enoyl-CoA(4-) anabolism; 3-methylbut-2-enoyl-CoA(4-) biosynthesis; 3-methylbut-2-enoyl-CoA(4-) formation; 3-methylbut-2-enoyl-CoA(4-) synthesis
negative regulation of bacterial-type flagellum-dependent cell motility (GO:1902201)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of bacterial-type flagellum-dependent cell motility.
Synonyms: down regulation of bacterial-type flagellar cell motility; down regulation of flagellin-based flagellar cell motility; down-regulation of bacterial-type flagellar cell motility; down-regulation of flagellin-based flagellar cell motility; downregulation of bacterial-type flagellar cell motility; downregulation of flagellin-based flagellar cell motility; inhibition of bacterial-type flagellar cell motility; inhibition of flagellin-based flagellar cell motility; negative regulation of bacterial-type flagellar cell motility; negative regulation of flagellin-based flagellar cell motility
regulation of hepatocyte growth factor receptor signaling pathway (GO:1902202)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.
Synonyms: regulation of HGF receptor signaling pathway; regulation of HGF receptor signalling pathway; regulation of Met signaling pathway
negative regulation of hepatocyte growth factor receptor signaling pathway (GO:1902203)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.
Synonyms: down regulation of hepatocyte growth factor receptor signaling pathway; down regulation of HGF receptor signaling pathway; down regulation of HGF receptor signalling pathway; down regulation of Met signaling pathway; down-regulation of hepatocyte growth factor receptor signaling pathway; down-regulation of HGF receptor signaling pathway; down-regulation of HGF receptor signalling pathway; down-regulation of Met signaling pathway; downregulation of hepatocyte growth factor receptor signaling pathway; downregulation of HGF receptor signaling pathway; downregulation of HGF receptor signalling pathway; downregulation of Met signaling pathway; inhibition of hepatocyte growth factor receptor signaling pathway; inhibition of HGF receptor signaling pathway; inhibition of HGF receptor signalling pathway; inhibition of Met signaling pathway; negative regulation of HGF receptor signaling pathway; negative regulation of HGF receptor signalling pathway; negative regulation of Met signaling pathway
positive regulation of hepatocyte growth factor receptor signaling pathway (GO:1902204)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.
Synonyms: activation of hepatocyte growth factor receptor signaling pathway; activation of HGF receptor signaling pathway; activation of HGF receptor signalling pathway; activation of Met signaling pathway; positive regulation of HGF receptor signaling pathway; positive regulation of HGF receptor signalling pathway; positive regulation of Met signaling pathway; up regulation of hepatocyte growth factor receptor signaling pathway; up regulation of HGF receptor signaling pathway; up regulation of HGF receptor signalling pathway; up regulation of Met signaling pathway; up-regulation of hepatocyte growth factor receptor signaling pathway; up-regulation of HGF receptor signaling pathway; up-regulation of HGF receptor signalling pathway; up-regulation of Met signaling pathway; upregulation of hepatocyte growth factor receptor signaling pathway; upregulation of HGF receptor signaling pathway; upregulation of HGF receptor signalling pathway; upregulation of Met signaling pathway
regulation of interleukin-2-mediated signaling pathway (GO:1902205)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of interleukin-2-mediated signaling pathway.
Synonyms: regulation of IL-2-mediated signaling pathway; regulation of interleukin-2-mediated signalling pathway
negative regulation of interleukin-2-mediated signaling pathway (GO:1902206)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-2-mediated signaling pathway.
Synonyms: down regulation of IL-2-mediated signaling pathway; down regulation of interleukin-2-mediated signaling pathway; down regulation of interleukin-2-mediated signalling pathway; down-regulation of IL-2-mediated signaling pathway; down-regulation of interleukin-2-mediated signaling pathway; down-regulation of interleukin-2-mediated signalling pathway; downregulation of IL-2-mediated signaling pathway; downregulation of interleukin-2-mediated signaling pathway; downregulation of interleukin-2-mediated signalling pathway; inhibition of IL-2-mediated signaling pathway; inhibition of interleukin-2-mediated signaling pathway; inhibition of interleukin-2-mediated signalling pathway; negative regulation of IL-2-mediated signaling pathway; negative regulation of interleukin-2-mediated signalling pathway
regulation of bacterial-type flagellum assembly (GO:1902208)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of bacterial-type flagellum assembly.
Synonyms: regulation of bacterial flagellum assembly
negative regulation of bacterial-type flagellum assembly (GO:1902209)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of bacterial-type flagellum assembly.
Synonyms: down regulation of bacterial flagellum assembly; down regulation of bacterial-type flagellum assembly; down-regulation of bacterial flagellum assembly; down-regulation of bacterial-type flagellum assembly; downregulation of bacterial flagellum assembly; downregulation of bacterial-type flagellum assembly; inhibition of bacterial flagellum assembly; inhibition of bacterial-type flagellum assembly; negative regulation of bacterial flagellum assembly
positive regulation of bacterial-type flagellum assembly (GO:1902210)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of bacterial-type flagellum assembly.
Synonyms: activation of bacterial flagellum assembly; activation of bacterial-type flagellum assembly; positive regulation of bacterial flagellum assembly; up regulation of bacterial flagellum assembly; up regulation of bacterial-type flagellum assembly; up-regulation of bacterial flagellum assembly; up-regulation of bacterial-type flagellum assembly; upregulation of bacterial flagellum assembly; upregulation of bacterial-type flagellum assembly
regulation of prolactin signaling pathway (GO:1902211)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of prolactin signaling pathway.
Synonyms: regulation of PRL signaling pathway; regulation of prolactin-mediated signaling pathway