LiteFold/GO huggingface dataset:
obsolete interaction with symbiont via protein secreted by type III secretion system (GO:0052328)
Namespace: biological_process
Definition: OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type III secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: interaction with symbiont via protein secreted by type III secretion system
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete hemolysis in other organism involved in symbiotic interaction (GO:0052331)
Namespace: biological_process
Definition: OBSOLETE. The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another, where two organisms are in a symbiotic interaction.
Synonyms: haemolysis in other organism involved in symbiotic interaction; hemolysin activity; hemolysis by organism of erythrocytes in other organism during symbiotic interaction; hemolysis by organism of RBCs in other organism during symbiotic interaction; hemolysis by organism of red blood cells in other organism during symbiotic interaction; hemolysis of cells in other organism during symbiotic interaction; hemolysis of cells in other organism involved in symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modification by organism of membrane in other organism involved in symbiotic interaction (GO:0052332)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular membrane of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification by organism of cell membrane in other organism during symbiotic interaction; modification by organism of cell membrane in other organism involved in symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modification by organism of cell wall of other organism involved in symbiotic interaction (GO:0052333)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: metabolism by organism of cell wall of other organism; modification by organism of cell wall of other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modification by organism of cytoskeleton of other organism involved in symbiotic interaction (GO:0052334)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of the cytoskeleton of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification by organism of cytoskeleton of other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modification by host of symbiont cytoskeleton (GO:0052335)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of the symbiont cytoskeleton. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it was too vague.
obsolete modification by host of symbiont cell wall (GO:0052336)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: metabolism of symbiont cell wall by organism
Comment: This term was obsoleted because it was too vague.
obsolete disruption by host of symbiont membrane (GO:0052337)
Namespace: biological_process
Definition: OBSOLETE. The process in which a host organism destabilizes a symbiont membrane. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: modification by host of symbiont cell membrane; modification by host of symbiont membrane
Comment: This term was obsoleted because it was redundant with other terms: antimicrobial humoral immune response mediated by antimicrobial peptide ; GO:0061844 and killing by host of symbiont cells ; GO:0051873.
obsolete perturbation by host of symbiont cell wall (GO:0052338)
Namespace: biological_process
Definition: OBSOLETE. The perturbation by an organism of the symbiont cell wall, leading to damage or temporary subversion of the cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: catabolism of symbiont cell wall by organism; degradation of symbiont cell wall by organism; disassembly by host of symbiont cell wall; disruption by host of symbiont cell wall
Comment: This term was obsoleted because it was redundant with other terms: antimicrobial humoral immune response mediated by antimicrobial peptide ; GO:0061844 and killing by host of symbiont cells ; GO:0051873.
obsolete disruption by organism of cell wall of other organism involved in symbiotic interaction (GO:0052339)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: disassembly by organism of cell wall of other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (GO:0052340)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism by organism of cell wall cellulose in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction (GO:0052341)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism by organism of cell wall pectin in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete catabolism by organism of cell wall chitin in other organism involved in symbiotic interaction (GO:0052342)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism by organism of cell wall chitin in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete positive regulation by organism of symbiont phytoalexin production (GO:0052343)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: positive regulation by organism of symbiont phytoalexin production
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete positive regulation by symbiont of host phytoalexin production (GO:0052344)
Namespace: biological_process
Definition: OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: activation by symbiont of host phytoalexin production; positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction; stimulation by symbiont of host phytoalexin production; up regulation by symbiont of host phytoalexin production; up-regulation by symbiont of host phytoalexin production; upregulation by symbiont of host phytoalexin production
Comment: This term was obsoleted because there is no evidence that this process exists.
obsolete positive regulation by organism of defense-related symbiont nitric oxide production (GO:0052346)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: positive regulation by organism of defense-related symbiont nitric oxide production; positive regulation by organism of defense-related symbiont NO production
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete positive regulation by organism of defense-related symbiont reactive oxygen species production (GO:0052349)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: positive regulation by organism of defense-related symbiont active oxygen species production; positive regulation by organism of defense-related symbiont AOS production; positive regulation by organism of defense-related symbiont metabolic burst; positive regulation by organism of defense-related symbiont oxidative burst; positive regulation by organism of defense-related symbiont reactive oxidative species production; positive regulation by organism of defense-related symbiont reactive oxygen intermediate production; positive regulation by organism of defense-related symbiont reactive oxygen species production; positive regulation by organism of defense-related symbiont respiratory burst; positive regulation by organism of defense-related symbiont ROI production; positive regulation by organism of defense-related symbiont ROS production
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete induction by organism of systemic acquired resistance in symbiont (GO:0052351)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: activation by organism of SAR in symbiont; activation by organism of systemic acquired resistance in symbiont; induction by organism of SAR in symbiont; induction by organism of systemic acquired resistance in symbiont
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete biosynthesis by host of substance in symbiont (GO:0052352)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the formation of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because there is no evidence that this process exists.
obsolete catabolism by host of symbiont carbohydrate (GO:0052353)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents a molecular function.
obsolete catabolism by organism of carbohydrate in other organism involved in symbiotic interaction (GO:0052354)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism by organism of carbohydrate in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents a molecular function.
obsolete catabolism by host of symbiont cell wall cellulose (GO:0052355)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents a molecular function.
obsolete catabolism by host of symbiont cell wall pectin (GO:0052357)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because there is no evidence it exists.
obsolete catabolism by host of symbiont glucan (GO:0052358)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because there is no evidence it exists.
obsolete catabolism by organism of glucan in other organism involved in symbiotic interaction (GO:0052359)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism by organism of glucan in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete catabolism by host of symbiont macromolecule (GO:0052360)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents a molecular function.
obsolete catabolism by host of symbiont protein (GO:0052362)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents a molecular function.
obsolete catabolism by organism of protein in other organism involved in symbiotic interaction (GO:0052363)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism by organism of protein in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete catabolism by host of substance in symbiont (GO:0052364)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the breakdown of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents a molecular function.
obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (GO:0052368)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: catabolism of cellular component in other organism; catabolism of structural constituent in other organism; degradation of cellular component in other organism; disassembly by organism of cellular component in other organism during symbiotic interaction; disassembly by organism of cellular component in other organism involved in symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
modulation by symbiont of entry into host (GO:0052372)
Namespace: biological_process
Definition: Any process in which an organism modulates the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.
Synonyms: modulation by organism of entry into other organism during symbiotic interaction; regulation by organism of entry into other organism during symbiotic interaction; regulation by organism of entry into other organism involved in symbiotic interaction
suppression of symbiont entry into host (GO:0052373)
Namespace: biological_process
Definition: Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: down regulation by organism of entry into other organism during symbiotic interaction; down-regulation by organism of entry into other organism during symbiotic interaction; downregulation by organism of entry into other organism during symbiotic interaction; inhibition by organism of entry into other organism during symbiotic interaction; negative regulation by organism of entry into other organism during symbiotic interaction; negative regulation by organism of entry into other organism involved in symbiotic interaction; suppression of symbiont entry into host by host
obsolete evasion or tolerance by organism of symbiont-produced nitric oxide (GO:0052375)
Namespace: biological_process
Definition: OBSOLETE. The process by which an organism avoids the effects of nitric oxide produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: evasion or tolerance by organism of symbiont nitric oxide; evasion or tolerance by organism of symbiont NO; evasion or tolerance by organism of symbiont-produced nitric oxide; evasion or tolerance by organism of symbiont-produced NO; evasion or tolerance of nitric oxide produced by symbiont in response to organism; evasion or tolerance of NO produced by symbiont in response to organism
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete evasion or tolerance by organism of symbiont-produced phytoalexins (GO:0052377)
Namespace: biological_process
Definition: OBSOLETE. The process by which an organism avoids the effects of phytoalexins produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: evasion or tolerance by organism of symbiont phytoalexins; evasion or tolerance by organism of symbiont-produced phytoalexins; evasion or tolerance of phytoalexins produced by symbiont in response to organism; symbiont phytoalexin detoxification
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete modulation by organism of entry into other organism via phagocytosis involved in symbiotic interaction (GO:0052379)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism modulates the frequency, rate or extent to which it enters into a second organism via the phagocytotic processes of the other organism, where the two organisms are in a symbiotic interaction.
Synonyms: modulation by organism of entry into other organism via other organism phagocytosis during symbiotic interaction; modulation by organism of entry into other organism via phagocytosis during symbiotic interaction
Comment: This term was obsoleted because there is no evidence that this process exists.
tRNA dimethylallyltransferase activity (GO:0052381)
Namespace: molecular_function
Definition: Catalysis of the reaction: adenosine(37) in tRNA + dimethylallyl diphosphate = N(6)-dimethylallyladenosine(37) in tRNA + diphosphate.
Synonyms: dimethylallyl-diphosphate:tRNA dimethylallyltransferase activity; tRNA isopentenyltransferase activity; tRNA N6-adenosine-37 dimethylallyltransferase activity; tRNA prenyltransferase activity
Comment: Note that this activity was formerly know in GO and EC as 'tRNA isopentenyltransferase' (GO:0004811), but it is now known that dimethylallyl diphosphate, rather than isopentenyl diphosphate, is the substrate.
obsolete induction by organism of symbiont innate immunity (GO:0052383)
Namespace: biological_process
Definition: OBSOLETE. The activation by an organism of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: activation by organism of symbiont innate immune response; activation by organism of symbiont innate immunity; induction by organism of symbiont innate immune response; induction by organism of symbiont innate immunity
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete evasion or tolerance by organism of symbiont-produced reactive oxygen species (GO:0052384)
Namespace: biological_process
Definition: OBSOLETE. The process by which an organism avoids the effects of reactive oxygen species produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: evasion by organism of cellular damage caused by symbiont oxidative burst; evasion or tolerance by organism of reactive oxygen species produced during symbiont defense response; evasion or tolerance by organism of symbiont-produced reactive oxygen species; evasion or tolerance of defense-related symbiont metabolic burst; evasion or tolerance of defense-related symbiont oxidative burst; evasion or tolerance of defense-related symbiont respiratory burst; evasion or tolerance of reactive oxygen species produced by symbiont in response to organism; evasion or tolerance of symbiont-produced active oxygen species; evasion or tolerance of symbiont-produced AOS; evasion or tolerance of symbiont-produced reactive oxygen intermediates; evasion or tolerance of symbiont-produced ROIs; evasion or tolerance of symbiont-produced ROS
Comment: This term was made obsolete because it does not represent a real biological process.
cell wall thickening (GO:0052386)
Namespace: biological_process
Definition: A type of cell wall modification in which the cell wall is reinforced and made thicker.