LiteFold/GO huggingface dataset:
regulation of branching involved in mammary gland duct morphogenesis (GO:0060762)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of branching involved in mammary gland duct morphogenesis.
mammary duct terminal end bud growth (GO:0060763)
Namespace: biological_process
Definition: The morphogenetic growth of the large, club-shaped terminal end of a mammary gland duct during prepubertal growth and during puberty.
cell-cell signaling involved in mammary gland development (GO:0060764)
Namespace: biological_process
Definition: Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure.
Synonyms: cell-cell signalling involved in mammary gland development
regulation of androgen receptor signaling pathway (GO:0060765)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.
Synonyms: regulation of androgen receptor signalling pathway
negative regulation of androgen receptor signaling pathway (GO:0060766)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of the androgen receptor signaling pathway.
Synonyms: negative regulation of androgen receptor signalling pathway
epithelial cell proliferation involved in prostate gland development (GO:0060767)
Namespace: biological_process
Definition: The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.
regulation of epithelial cell proliferation involved in prostate gland development (GO:0060768)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.
positive regulation of epithelial cell proliferation involved in prostate gland development (GO:0060769)
Namespace: biological_process
Definition: Any process that increases the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.
negative regulation of epithelial cell proliferation involved in prostate gland development (GO:0060770)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.
phyllotactic patterning (GO:0060771)
Namespace: biological_process
Definition: The radial pattern formation process that results in the formation of plant organs (leaves or leaf-like structures) or flower primordia around a central axis.
leaf phyllotactic patterning (GO:0060772)
Namespace: biological_process
Definition: The radial pattern formation process that results in the formation of leaf primordia around the center of a shoot apical meristem.
flower phyllotactic patterning (GO:0060773)
Namespace: biological_process
Definition: The radial pattern formation process that results in the formation of floral organ primordia around a central axis in a flower primordium.
obsolete auxin mediated signaling pathway involved in phyllotactic patterning (GO:0060774)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated in response to detection of auxin that contributes to the radial pattern formation process resulting in the formation of leaf or flower primordia around the center of a shoot apical meristem.
Synonyms: auxin mediated signalling pathway involved in phyllotactic patterning
Comment: This term was obsoleted because it represents a GO-CAM model.
simple leaf morphogenesis (GO:0060776)
Namespace: biological_process
Definition: The leaf morphogenesis process which results in the shaping of a simple leaf. A simple leaf is a leaf in which the lamina is undivided.
compound leaf morphogenesis (GO:0060777)
Namespace: biological_process
Definition: The leaf morphogenesis process that results in the shaping of a compound leaf. A compound leaf is a leaf having two or more distinct leaflets that are evident as such from early in development.
primary leaflet morphogenesis (GO:0060778)
Namespace: biological_process
Definition: The process in which the primary leaflet attains its shape. A primary leaflet is a leaflet that develops directly from the rachis.
secondary leaflet morphogenesis (GO:0060779)
Namespace: biological_process
Definition: The process in which the secondary leaflet attains its shape. A secondary leaflet develops by branching or division of a primary leaflet.
intercalary leaflet morphogenesis (GO:0060780)
Namespace: biological_process
Definition: The process in which the intercalary leaflet attains its shape. An intercalary leaflet is a leaflet that develops between primary leaflets.
obsolete mesenchymal cell proliferation involved in prostate gland development (GO:0060781)
Namespace: biological_process
Definition: OBSOLETE. The multiplication or reproduction of mesenchymal cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete regulation of mesenchymal cell proliferation involved in prostate gland development (GO:0060782)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the prostate gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
mesenchymal smoothened signaling pathway involved in prostate gland development (GO:0060783)
Namespace: biological_process
Definition: The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.
Synonyms: mesenchymal hedgehog signaling pathway involved in prostate gland development; mesenchymal hh signaling pathway involved in prostate gland development; mesenchymal smoothened signalling pathway involved in prostate gland development
regulation of cell proliferation involved in tissue homeostasis (GO:0060784)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cell proliferation resulting in the maintenance of a steady-state number of cells within a tissue.
regulation of apoptosis involved in tissue homeostasis (GO:0060785)
Namespace: biological_process
Definition: Any process that modulates the occurrence or rate of cell death by apoptosis that results in the maintenance of the steady-state number of cells within a tissue.
positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway (GO:0060787)
Namespace: biological_process
Definition: Any process that increases the rate or extent of the formation of the posterior neural plate, the posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.
Synonyms: positive regulation of posterior neural plate formation by FGF receptor signaling pathway; positive regulation of posterior neural plate formation by fibroblast growth factor receptor signalling pathway
ectodermal placode formation (GO:0060788)
Namespace: biological_process
Definition: The developmental process in which an ectodermal placode forms. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.
hair follicle placode formation (GO:0060789)
Namespace: biological_process
Definition: The developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.
tooth placode formation (GO:0060790)
Namespace: biological_process
Definition: The developmental process in which the tooth placode forms. A tooth placode is a thickening of the ectoderm that will give rise to the tooth bud.
sebaceous gland placode formation (GO:0060791)
Namespace: biological_process
Definition: The developmental process in which a sebaceous gland placode forms. A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud.
sweat gland development (GO:0060792)
Namespace: biological_process
Definition: The progression of the sweat gland over time, from its formation to the mature structure. Sweat glands secrete an aqueous solution that is used in thermoregulation.
sweat gland placode formation (GO:0060793)
Namespace: biological_process
Definition: The developmental process in which the sweat gland placode forms. An sweat gland placode is a thickening of the ectoderm that will give rise to the sweat gland bud.
leaflet morphogenesis (GO:0060794)
Namespace: biological_process
Definition: The process in which the anatomical structures of the leaflet are generated and organized.
obsolete regulation of transcription involved in primary germ layer cell fate commitment (GO:0060796)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in cells adopting an endoderm, ectoderm or mesoderm cell fate.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete transforming growth factor beta receptor signaling pathway involved in primary germ layer cell fate commitment (GO:0060797)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to an unspecified cell adopting a mesoderm fate.
Synonyms: transforming growth factor beta receptor signalling pathway involved in primary germ layer cell fate commitment
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete transforming growth factor beta receptor signaling pathway involved in mesodermal cell fate specification (GO:0060798)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of a mesodermal fate.
Synonyms: transforming growth factor beta receptor signalling pathway involved in mesodermal cell fate specification
Comment: This term was obsoleted because it represents a GO-CAM model.
regulation of cell differentiation involved in embryonic placenta development (GO:0060800)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency or extent of cell differentiation that contributes to the progression of the placenta over time, from its initial condition to its mature state.
obsolete negative regulation of trophoblast cell differentiation by transforming growth factor beta signaling pathway (GO:0060801)
Namespace: biological_process
Definition: OBSOLETE. The transforming growth factor signaling process that decreases the rate, frequency, or extent of trophoblast stem cells differentiating into the more mature cells of the trophoblast.
Synonyms: negative regulation of trophoblast cell differentiation by transforming growth factor beta signalling pathway
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete BMP signaling pathway involved in mesodermal cell fate specification (GO:0060803)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to a cell becoming specified to adopt a mesodermal fate.
Synonyms: BMP signalling pathway involved in mesodermal cell fate specification
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of Wnt signaling pathway by BMP signaling pathway (GO:0060804)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in an increase in the rate, frequency or extent of a Wnt signaling pathway.
Synonyms: positive regulation of WNT receptor signaling pathway by BMP signaling pathway; positive regulation of WNT receptor signalling pathway by BMP signalling pathway; positive regulation of Wnt-activated signaling pathway by BMP signaling pathway
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete negative regulation of trophoblast cell differentiation by transcription regulation from RNA polymerase II promoter (GO:0060805)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the rate, frequency or extent of transcription from an RNA polymerase II promoter ultimately resulting in a decrease in trophoblast stem cells differentiating into the more mature cells of the trophoblast.
Comment: This term was obsoleted because it represents a GO-CAM model.
negative regulation of cell differentiation involved in embryonic placenta development (GO:0060806)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of cell differentiation that contributes to the progression of the placenta over time, from its initial condition to its mature state.
obsolete regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification (GO:0060807)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that ultimately results in a cell being specified to adopt a definitive endodermal cell fate.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of mesodermal to mesenchymal transition involved in gastrulation (GO:0060808)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where a mesodermal cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell as part of the process of gastrulation.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
mesodermal to mesenchymal transition involved in gastrulation (GO:0060809)
Namespace: biological_process
Definition: The epithelial to mesenchymal transition process in which a mesodermal cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell as part of the process of gastrulation.
intracellular mRNA localization involved in pattern specification process (GO:0060810)
Namespace: biological_process
Definition: Any process in which mRNA is transported to, or maintained in, a specific location within an oocyte that results in a pattern being established in the embryo.
Synonyms: intracellular mRNA localisation involved in pattern specification process
intracellular mRNA localization involved in anterior/posterior axis specification (GO:0060811)
Namespace: biological_process
Definition: Any process in which mRNA is transported to, or maintained in, a specific location within the oocyte and/or syncytial embryo that contributes to the specification of the anterior/posterior axis.
Synonyms: intracellular mRNA localisation involved in anterior/posterior axis specification
orthodenticle mRNA localization (GO:0060812)
Namespace: biological_process
Definition: Any process in which orthodenticle mRNA is transported to and maintained in the oocyte and/or syncytial embryo as part of the process that will specify the anterior/posterior axis.
Synonyms: orthodenticle mRNA localisation
anterior mRNA localization involved in anterior/posterior axis specification (GO:0060813)
Namespace: biological_process
Definition: Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.
Synonyms: anterior mRNA localisation involved in anterior/posterior axis specification
posterior mRNA localization involved in anterior/posterior axis specification (GO:0060814)
Namespace: biological_process
Definition: Any process in which a mRNA is transported to and maintained in the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.
Synonyms: posterior mRNA localisation involved in anterior/posterior axis specification
obsolete regulation of translation involved in anterior/posterior axis specification (GO:0060815)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of translation of mRNAs that contribute to the specification of the anterior/posterior axis.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
random inactivation of X chromosome (GO:0060816)
Namespace: biological_process
Definition: Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on either the paternal or maternal X-chromosome in the XX sex.
Synonyms: rXCI
obsolete inactivation of paternal X chromosome (GO:0060817)
Namespace: biological_process
Definition: OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes specifically on the paternal X-chromosome in the XX sex.
Comment: This term was obsoleted because its was equivalent to 'inactivation of paternal X chromosome by genomic imprinting ; GO:0060818.
inactivation of paternal X chromosome by genomic imprinting (GO:0060818)
Namespace: biological_process
Definition: Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on the paternal X-chromosome in the XX sex by genomic imprinting.
Synonyms: inactivation of paternal X chromosome by genetic imprinting; iXCI
Comment: Imprinting controlled inactivation of the paternal X chromosome appears to be the ancestral form of sex chromosome inactivation in therian mammals. In eutherian mammals, imprinted X inactivation (iXCI) has largely been replaced by random X inactivation in a process regulated by the Xist and additional ncRNA's encoded within the "choice" region of the X chromosome. In a few mammals with early zygotic genome activation, imprinted X inactivation of the paternal X chromsome occurs very early during embryonic development. Imprinted iXCI has been observed in mice, rats, and bovines, and is best studied in mice where it occurs in the 4 cell stage in mice. In epiblast cells which will become the embryo proper, the inactivated paternal X chromosome is reactivated and dosage compensation of the X chromosome is regenerated by random X inactivation in embryonic tissues. In extraembryonic tissues, the selective inactivation of the paternal chromosome remains and is essential for proper development of the placenta. Selective inactivation of the paternal X chromosome via imprinting is the only form of X chromosome inactivation in marsupials, though the mechanism there may be significantly different in marsupials as the Xist transcript is not present on metatherian X chromosomes.
obsolete inactivation of X chromosome by genomic imprinting (GO:0060819)
Namespace: biological_process
Definition: OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genomic imprinting.
Synonyms: inactivation of X chromosome by genetic imprinting
Comment: This term was obsoleted because its was equivalent to 'inactivation of paternal X chromosome by genomic imprinting ; GO:0060818.
obsolete inactivation of X chromosome by heterochromatin formation (GO:0060820)
Namespace: biological_process
Definition: OBSOLETE. Compensating for the two-fold variation in X-chromosome: autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by the mechanism of heterochromatin formation.
Synonyms: inactivation of X chromosome by heterochromatin assembly
Comment: This term was obsoleted because its meaning was ambiguous and the term was used inconsistently.
obsolete inactivation of X chromosome by DNA methylation (GO:0060821)
Namespace: biological_process
Definition: OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by a mechanism of DNA methylation.
Comment: This term was obsoleted because it represents a molecular function.
obsolete transforming growth factor beta receptor signaling pathway involved in axial mesodermal cell fate specification (GO:0060822)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of an axial mesodermal fate.
Synonyms: transforming growth factor beta receptor signalling pathway involved in axial mesodermal cell fate specification
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (GO:0060823)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to the formation of the neural plate anterior/posterior pattern.
Synonyms: canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation; canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation; canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern formation; Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete retinoic acid receptor signaling pathway involved in neural plate anterior/posterior pattern formation (GO:0060824)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the formation of the anterior/posterior pattern of the neural plate.
Synonyms: retinoic acid receptor signalling pathway involved in neural plate anterior/posterior pattern formation
Comment: This term was obsoleted because it is a pre-composed term that represents a GO-CAM model.