LiteFold/GO huggingface dataset:
obsolete positive regulation by host of cytolysis of symbiont cells (GO:0051841)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: activation by host of cytolysis of symbiont cells; stimulation by host of cytolysis of symbiont cells; up regulation by host of cytolysis of symbiont cells; up-regulation by host of cytolysis of symbiont cells; upregulation by host of cytolysis of symbiont cells
Comment: This term was obsoleted because it has been used inconsistently.
obsolete evasion or tolerance of symbiont immune response (GO:0051842)
Namespace: biological_process
Definition: OBSOLETE. Any process, either active or passive, by which an organism avoids the effects of the symbiont organism's immune response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: evasion or tolerance of symbiont immune response; immune evasion
Comment: This term was made obsolete because it does not represent a valid biological process that occurs in nature.
obsolete evasion or tolerance of symbiont defense response (GO:0051843)
Namespace: biological_process
Definition: OBSOLETE. Any process, either active or passive, by which an organism avoids or tolerates the effects of a symbiont organism's defense response. The symbiont defense response is mounted by the symbiont in response to the presence of the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: evasion of symbiont defence response; evasion or tolerance of symbiont defense response
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
translocation of peptides or proteins into symbiont (GO:0051844)
Namespace: biological_process
Definition: The directed movement of peptides or proteins produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: transport of peptides or proteins into symbiont
obsolete passive evasion of symbiont immune response (GO:0051845)
Namespace: biological_process
Definition: OBSOLETE. Any mechanism of immune avoidance that does not directly interfere with the symbiont immune system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: passive evasion of symbiont immune response; passive immune evasion
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
obsolete active evasion of symbiont immune response (GO:0051846)
Namespace: biological_process
Definition: OBSOLETE. Any mechanism of immune avoidance that directly affects the symbiont immune system, e.g. blocking any stage in symbiont MHC class I and II presentation. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: active evasion of symbiont immune response; active immune evasion
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
obsolete active evasion of symbiont immune response via regulation of symbiont complement system (GO:0051847)
Namespace: biological_process
Definition: OBSOLETE. Any mechanism of active immune avoidance which works by regulating the symbiont complement system, e.g. by possessing complement receptors which mediate attachment to, then infection of, symbiont macrophages, which are eventually destroyed. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: active evasion of symbiont immune response via regulation of symbiont complement system; active immune evasion via modulation of symbiont complement system; active immune evasion via regulation of symbiont complement system
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
obsolete active evasion of symbiont immune response via regulation of symbiont cytokine network (GO:0051848)
Namespace: biological_process
Definition: OBSOLETE. Any mechanism of active immune avoidance which works by regulating symbiont cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester symbiont cytokines and inhibit action. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: active evasion of symbiont immune response via regulation of symbiont cytokine network; active immune evasion via modulation of symbiont cytokine network; active immune evasion via regulation of symbiont cytokine network
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
obsolete active evasion of symbiont immune response via regulation of symbiont antigen processing and presentation (GO:0051849)
Namespace: biological_process
Definition: OBSOLETE. Any mechanism of active immune avoidance which works by regulating the symbiont's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: active evasion of symbiont immune response via regulation of symbiont antigen processing and presentation; active evasion of symbiont immune response via regulation of symbiont antigen processing and presentation pathway; active immune evasion via modulation of symbiont antigen processing and presentation; active immune evasion via modulation of symbiont antigen processing/presentation; active immune evasion via regulation of symbiont antigen processing or presentation
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
acquisition of nutrients from symbiont (GO:0051850)
Namespace: biological_process
Definition: The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
host-mediated perturbation of symbiont process (GO:0051851)
Namespace: biological_process
Definition: The process in which an host alters or subverts a process in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: modification by host of symbiont morphology or physiology; modulation by host of symbiont process
obsolete induction in symbiont of tumor, nodule, or growth (GO:0051853)
Namespace: biological_process
Definition: OBSOLETE. The process by which an associated organism causes the formation of an abnormal mass of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: induction in symbiont of tumor, nodule, or growth
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
obsolete induction in symbiont of tumor, nodule, or growth containing transformed cells (GO:0051854)
Namespace: biological_process
Definition: OBSOLETE. The process by which an organism causes the formation in its symbiont organism of an abnormal growth whose cells have been transformed and continue to exist in the absence of the first organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: induction in symbiont of tumor, nodule, or growth containing transformed cells
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
obsolete growth or development of organism on or near symbiont surface (GO:0051857)
Namespace: biological_process
Definition: OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: growth or development of organism during interaction with symbiont; growth or development of organism on or near symbiont surface
obsolete avoidance of symbiont defenses (GO:0051858)
Namespace: biological_process
Definition: OBSOLETE. Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of its symbiont organism's defense(s). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was made obsolete because it is not relevant for the host in a host-symbiont interaction.
obsolete suppression of symbiont defenses (GO:0051859)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont defense(s) by active mechanisms that normally result in the shutting down of a symbiont pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was made obsolete because it is not relevant for the host in a host-symbiont interaction.
obsolete evasion or tolerance of symbiont defenses (GO:0051860)
Namespace: biological_process
Definition: OBSOLETE. The process, either active or passive, by which an organism evades or tolerates the effects of the defense(s) or defense molecules of a symbiont organism. Symbiont defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was made obsolete because it is not relevant for the host in a host-symbiont interaction.
glycolipid binding (GO:0051861)
Namespace: molecular_function
Definition: Binding to a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic group such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate.
translocation of molecules into symbiont (GO:0051862)
Namespace: biological_process
Definition: The directed movement of molecule(s) produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: transport of molecules into symbiont
obsolete translocation of DNA into symbiont (GO:0051863)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of DNA from an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: translocation of DNA into symbiont
Comment: This term was made obsolete because it does not represent a real process that exists in nature.
histone H3K36 demethylase activity (GO:0051864)
Namespace: molecular_function
Definition: Catalysis of the removal of a methyl group from a modified lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.
Synonyms: [histone-H3]-lysine-36 demethylase activity; histone demethylase activity (H3-K36 specific); histone H3-K36 demethylase activity; histone H3-lysine-36 demethylase activity; histone H3-methyl-lysine-36 demethylase activity; histone-lysine (H3-K36) demethylase activity; histone-lysine demethylase activity (H3-K36 specific); histone-lysine(H3-K36) demethylase activity
Comment: Comment: Note that the residue position corresponds to the canonical human H3 histone (UniProtKB:P84243); this residue is conserved across all eukaryotes. Residue 1 is the first residue following removal of the initiating Methionine (Met). Note that each histone is encoded by multiple genes, and sequences may vary across different genes within an organism.
protein autoubiquitination (GO:0051865)
Namespace: biological_process
Definition: The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
Synonyms: protein auto-ubiquitination; protein auto-ubiquitinylation; protein autoubiquitinylation; protein self-ubiquitination; protein self-ubiquitinylation
general adaptation syndrome (GO:0051866)
Namespace: biological_process
Definition: General adaptation syndrome is the set of changes in various organ systems of the body, especially the pituitary-endocrine system, in response to a wide range of strong external stimuli, both physiological and psychological. It is described as having three stages: alarm reaction, where the body detects the external stimulus; adaptation, where the body engages defensive countermeasures against the stressor; and exhaustion, where the body begins to run out of defenses.
Synonyms: general adaptation syndrome, physiological process; general adaptation syndrome, physiological response; physiological process during general adaptation syndrome; physiological response during general adaptation syndrome
general adaptation syndrome, behavioral process (GO:0051867)
Namespace: biological_process
Definition: The set of behavioral processes that occur as part of the general adaptation syndrome, the response of the body to a strong, stressful stimulus.
Synonyms: behavioral process during general adaptation syndrome; behavioral response during general adaptation syndrome; behavioural process during general adaptation syndrome; behavioural response during general adaptation syndrome; general adaptation syndrome, behavioral response; general adaptation syndrome, behavioural process; general adaptation syndrome, behavioural response
methotrexate binding (GO:0051870)
Namespace: molecular_function
Definition: Binding to methotrexate, an antineoplastic antimetabolite with immunosuppressant properties. It is an inhibitor of tetrahydrofolate reductase and prevents the formation of tetrahydrofolate, necessary for synthesis of thymidylate, an essential component of DNA.
dihydrofolic acid binding (GO:0051871)
Namespace: molecular_function
Definition: Binding to dihydrofolic acid, a folic acid in which the bicyclic pteridine structure is in the dihydro, partially reduced form; they are intermediates in folate metabolism and are reduced to their tetrahydro, reduced forms.
Synonyms: DHF binding; dihydrofolate binding
sphingosine catabolic process (GO:0051872)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.
Synonyms: (4E)-sphing-4-enine catabolic process; (4E)-sphing-4-enine catabolism; sphing-4-enine catabolic process; sphing-4-enine catabolism
obsolete killing by host of symbiont cells (GO:0051873)
Namespace: biological_process
Definition: OBSOLETE. Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: disruption by host of symbiont cells
Comment: This term was obsoleted because it is redundant with other more specific processes, such as\ninnate immune response ; GO:0045087, and natural killer cell mediated cytotoxicity ; GO:0042267.
pigment granule localization (GO:0051875)
Namespace: biological_process
Definition: Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell.
Synonyms: pigment granule localisation
pigment granule aggregation in cell center (GO:0051877)
Namespace: biological_process
Definition: The directed movement of dispersed pigment granules towards the center of the cell.
lateral element assembly (GO:0051878)
Namespace: biological_process
Definition: The cell cycle process in which lateral elements are formed. Axial elements form a proteinaceous core between the two sister chromatids of each chromosome; the two axial elements then connect along their entire lengths by fine fibers known as transverse filaments, forming the lateral elements.
Hsp90 protein binding (GO:0051879)
Namespace: molecular_function
Definition: Binding to Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size.
Synonyms: Hsp90 binding; Hsp90 class protein binding
G-quadruplex DNA binding (GO:0051880)
Namespace: molecular_function
Definition: Binding to G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
Synonyms: G quadruplex DNA binding; G quartet binding; G quartet DNA binding; G-DNA binding; G-quartet binding; G-quartet DNA binding; quadruplex DNA binding; tetraplex DNA binding
regulation of mitochondrial membrane potential (GO:0051881)
Namespace: biological_process
Definition: Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.
mitochondrial depolarization (GO:0051882)
Namespace: biological_process
Definition: The process in which the potential difference across the mitochondrial membrane is reduced from its steady state level.
Synonyms: mitochondria depolarization; mitochondrial depolarisation; mitochondrial membrane depolarization; mitochondrion depolarization
obsolete killing of cells in other organism involved in symbiotic interaction (GO:0051883)
Namespace: biological_process
Definition: OBSOLETE. Any process mediated by an organism that results in the death of cells in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: killing of cells in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
regulation of timing of anagen (GO:0051884)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.
Synonyms: regulation of anagen
positive regulation of timing of anagen (GO:0051885)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.
Synonyms: activation of anagen; positive regulation of anagen; stimulation of anagen; up regulation of anagen; up-regulation of anagen; upregulation of anagen
negative regulation of timing of anagen (GO:0051886)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.
Synonyms: down regulation of anagen; down-regulation of anagen; downregulation of anagen; inhibition of anagen; negative regulation of anagen
regulation of timing of exogen (GO:0051887)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.
Synonyms: regulation of exogen
positive regulation of timing of exogen (GO:0051888)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.
Synonyms: activation of exogen; positive regulation of exogen; stimulation of exogen; up regulation of exogen; up-regulation of exogen; upregulation of exogen
negative regulation of timing of exogen (GO:0051889)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.
Synonyms: down regulation of exogen; down-regulation of exogen; downregulation of exogen; inhibition of exogen; negative regulation of exogen
regulation of cardioblast differentiation (GO:0051890)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
positive regulation of cardioblast differentiation (GO:0051891)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
Synonyms: activation of cardioblast differentiation; stimulation of cardioblast differentiation; up regulation of cardioblast differentiation; up-regulation of cardioblast differentiation; upregulation of cardioblast differentiation
negative regulation of cardioblast differentiation (GO:0051892)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
Synonyms: down regulation of cardioblast differentiation; down-regulation of cardioblast differentiation; downregulation of cardioblast differentiation; inhibition of cardioblast differentiation
regulation of focal adhesion assembly (GO:0051893)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions.
Synonyms: regulation of adhesion plaque assembly
positive regulation of focal adhesion assembly (GO:0051894)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.
Synonyms: activation of focal adhesion formation; stimulation of focal adhesion formation; up regulation of focal adhesion formation; up-regulation of focal adhesion formation; upregulation of focal adhesion formation
negative regulation of focal adhesion assembly (GO:0051895)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.
Synonyms: down regulation of focal adhesion formation; down-regulation of focal adhesion formation; downregulation of focal adhesion formation; inhibition of focal adhesion formation