LiteFold/GO huggingface dataset:
obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (GO:1901213)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.
Synonyms: global transcription regulation from Pol II promoter involved in cardiac development; global transcription regulation from Pol II promoter involved in dorsal vessel development; global transcription regulation from Pol II promoter involved in heart development; regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development; regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development; regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development; regulation of global transcription from Pol II promoter involved in cardiac development; regulation of global transcription from Pol II promoter involved in dorsal vessel development; regulation of global transcription from Pol II promoter involved in heart development; regulation of transcription from Pol II promoter involved in cardiac development; regulation of transcription from Pol II promoter involved in dorsal vessel development; regulation of transcription from Pol II promoter involved in heart development; regulation of transcription from RNA polymerase II promoter involved in cardiac development; regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development; regulation of transcription from RNA polymerase II promoter, global involved in cardiac development; regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development; regulation of transcription from RNA polymerase II promoter, global involved in heart development
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete regulation of neuron death (GO:1901214)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of neuron death.
Synonyms: regulation of neuron cell death; regulation of neuronal cell death
Comment: The reason for obsoletion is that this term often represents an assay, or a phenotype and not a GO process.
obsolete negative regulation of neuron death (GO:1901215)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.
Synonyms: down regulation of neuron cell death; down regulation of neuron death; down regulation of neuronal cell death; down-regulation of neuron cell death; down-regulation of neuron death; down-regulation of neuronal cell death; downregulation of neuron cell death; downregulation of neuron death; downregulation of neuronal cell death; inhibition of neuron cell death; inhibition of neuron death; inhibition of neuronal cell death; negative regulation of neuron cell death; negative regulation of neuronal cell death
Comment: The reason for obsoletion is that this term often represents an assay, or a phenotype and not a GO process.
obsolete positive regulation of neuron death (GO:1901216)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of neuron death.
Synonyms: activation of neuron cell death; activation of neuron death; activation of neuronal cell death; positive regulation of neuron cell death; positive regulation of neuronal cell death; up regulation of neuron cell death; up regulation of neuron death; up regulation of neuronal cell death; up-regulation of neuron cell death; up-regulation of neuron death; up-regulation of neuronal cell death; upregulation of neuron cell death; upregulation of neuron death; upregulation of neuronal cell death
Comment: The reason for obsoletion is that this term often represents an assay, or a phenotype and not a GO process.
obsolete regulation of holin activity (GO:1901217)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of holin activity (GO:1901218)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of holin activity.
Synonyms: antiholin activity; down regulation of holin activity; down-regulation of holin activity; downregulation of holin activity; inhibition of holin activity; phage antiholin
Comment: This term was obsoleted because it represents a molecular function.
regulation of cardiac chamber morphogenesis (GO:1901219)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cardiac chamber morphogenesis.
Synonyms: regulation of heart chamber morphogenesis
negative regulation of cardiac chamber morphogenesis (GO:1901220)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.
Synonyms: down regulation of cardiac chamber morphogenesis; down regulation of heart chamber morphogenesis; down-regulation of cardiac chamber morphogenesis; down-regulation of heart chamber morphogenesis; downregulation of cardiac chamber morphogenesis; downregulation of heart chamber morphogenesis; inhibition of cardiac chamber morphogenesis; inhibition of heart chamber morphogenesis; negative regulation of heart chamber morphogenesis
positive regulation of cardiac chamber morphogenesis (GO:1901221)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis.
Synonyms: activation of cardiac chamber morphogenesis; activation of heart chamber morphogenesis; positive regulation of heart chamber morphogenesis; up regulation of cardiac chamber morphogenesis; up regulation of heart chamber morphogenesis; up-regulation of cardiac chamber morphogenesis; up-regulation of heart chamber morphogenesis; upregulation of cardiac chamber morphogenesis; upregulation of heart chamber morphogenesis
regulation of non-canonical NF-kappaB signal transduction (GO:1901222)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the non-canonical NF-kappaB signaling cascade.
Synonyms: NF-kappaB import into nucleus; NF-KB import into nucleus; regulation of NF-kappaB import into nucleus; regulation of NIK/NF-kappaB cascade; regulation of NIK/NF-kappaB signaling; regulation of non-canonical NF-KB signaling; regulation of noncanonical NF-kappaB signaling; regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway; regulation of p52-dependent NF-kappaB signaling
positive regulation of non-canonical NF-kappaB signal transduction (GO:1901224)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the non-canonical NF-kappaB cascade.
Synonyms: activation of NIK/NF-kappaB cascade; activation of non-canonical NF-KB signaling; activation of noncanonical NF-kappaB signaling; activation of noncanonical nuclear factor kappaB (NF-kappaB) pathway; activation of p52-dependent NF-kappaB signaling; positive regulation of NF-kappaB import into nucleus; positive regulation of NIK/NF-kappaB cascade; positive regulation of NIK/NF-kappaB signaling; positive regulation of non-canonical NF-KB signaling; positive regulation of noncanonical NF-kappaB signaling; positive regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway; positive regulation of p52-dependent NF-kappaB signaling; up regulation of NIK/NF-kappaB cascade; up regulation of non-canonical NF-KB signaling; up regulation of noncanonical NF-kappaB signaling; up regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway; up regulation of p52-dependent NF-kappaB signaling; up-regulation of NIK/NF-kappaB cascade; up-regulation of non-canonical NF-KB signaling; up-regulation of noncanonical NF-kappaB signaling; up-regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway; up-regulation of p52-dependent NF-kappaB signaling; upregulation of NIK/NF-kappaB cascade; upregulation of non-canonical NF-KB signaling; upregulation of noncanonical NF-kappaB signaling; upregulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway; upregulation of p52-dependent NF-kappaB signaling
obsolete regulation of non-canonical Wnt signaling pathway via JNK cascade (GO:1901229)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.
Synonyms: regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; regulation of non-canonical Wnt-activated signaling pathway via JNK cascade
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete negative regulation of non-canonical Wnt signaling pathway via JNK cascade (GO:1901230)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.
Synonyms: down regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; down regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; down-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; down-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; downregulation of non-canonical Wnt receptor signaling pathway via JNK cascade; downregulation of non-canonical Wnt receptor signalling pathway via JNK cascade; inhibition of non-canonical Wnt receptor signaling pathway via JNK cascade; inhibition of non-canonical Wnt receptor signalling pathway via JNK cascade; negative regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; negative regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; negative regulation of non-canonical Wnt-activated signaling pathway via JNK cascade
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of non-canonical Wnt signaling pathway via JNK cascade (GO:1901231)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.
Synonyms: activation of non-canonical Wnt receptor signaling pathway via JNK cascade; activation of non-canonical Wnt receptor signalling pathway via JNK cascade; positive regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; positive regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; positive regulation of non-canonical Wnt-activated signaling pathway via JNK cascade; up regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; up regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; up-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade; up-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade; upregulation of non-canonical Wnt receptor signaling pathway via JNK cascade; upregulation of non-canonical Wnt receptor signalling pathway via JNK cascade
Comment: This term was obsoleted because it represents a GO-CAM model.
regulation of convergent extension involved in axis elongation (GO:1901232)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of convergent extension involved in axis elongation.
obsolete negative regulation of convergent extension involved in axis elongation (GO:1901233)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in axis elongation.
Synonyms: down regulation of convergent extension involved in axis elongation; down-regulation of convergent extension involved in axis elongation; downregulation of convergent extension involved in axis elongation; inhibition of convergent extension involved in axis elongation
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete positive regulation of convergent extension involved in axis elongation (GO:1901234)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of convergent extension involved in axis elongation.
Synonyms: activation of convergent extension involved in axis elongation; up regulation of convergent extension involved in axis elongation; up-regulation of convergent extension involved in axis elongation; upregulation of convergent extension involved in axis elongation
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
(R)-carnitine transmembrane transporter activity (GO:1901235)
Namespace: molecular_function
Definition: Enables the transfer of (R)-carnitine from one side of a membrane to the other.
4-(trimethylammonio)butanoate transmembrane transporter activity (GO:1901236)
Namespace: molecular_function
Definition: Enables the transfer of 4-(trimethylammonio)butanoate from one side of a membrane to the other.
ABC-type tungstate transporter activity (GO:1901238)
Namespace: molecular_function
Definition: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + tungstate(in) = ADP + phosphate + tungstate(out).
Synonyms: ATPase-coupled tungstate transmembrane transporter activity; tungstate transmembrane transporter activity; tungstate transmembrane-transporting ATPase activity
malonate(1-) transmembrane transporter activity (GO:1901239)
Namespace: molecular_function
Definition: Enables the transfer of malonate(1-) from one side of a membrane to the other.
Synonyms: malonic acid uptake transmembrane transporter activity
4-hydroxyphenylacetate transmembrane transporter activity (GO:1901241)
Namespace: molecular_function
Definition: Enables the transfer of 4-hydroxyphenylacetate from one side of a membrane to the other.
ABC-type doxorubicin transporter activity (GO:1901242)
Namespace: molecular_function
Definition: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + doxorubicin(in) = ADP + phosphate + doxorubicin(out).
Synonyms: ATPase-coupled doxorubicin transmembrane transporter activity; doxorubicin transmembrane-transporting ATPase activity
positive regulation of toll-like receptor 9 signaling pathway by B cell receptor internalization (GO:1901245)
Namespace: biological_process
Definition: The movement of a B cell receptor (BCR) from the plasma membrane to the inside of the cell, which results in positive regulation of toll-like receptor 9 (TLR9) signaling. For example, internalized BCR signals to recruit TLR9 from multiple small endosomes to large autophagosome-like compartments to enhance TLR9 signaling.
Synonyms: BCR-induced TLR9 recruitment; positive regulation of TLR9 signaling pathway by B cell receptor internalization; positive regulation of TLR9 signaling pathway by BCR endocytosis; positive regulation of TLR9 signaling pathway by BCR receptor internalization; positive regulation of toll-like receptor 9 signaling pathway by BCR endocytosis; positive regulation of toll-like receptor 9 signaling pathway by BCR receptor internalization; positive regulation of toll-like receptor 9 signalling pathway by B cell receptor internalization; positive regulation of toll-like receptor 9 signalling pathway by BCR endocytosis; positive regulation of toll-like receptor 9 signalling pathway by BCR receptor internalization
regulation of lung ciliated cell differentiation (GO:1901246)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation.
negative regulation of lung ciliated cell differentiation (GO:1901247)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of lung ciliated cell differentiation.
Synonyms: down regulation of lung ciliated cell differentiation; down-regulation of lung ciliated cell differentiation; downregulation of lung ciliated cell differentiation; inhibition of lung ciliated cell differentiation
positive regulation of lung ciliated cell differentiation (GO:1901248)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation.
Synonyms: activation of lung ciliated cell differentiation; up regulation of lung ciliated cell differentiation; up-regulation of lung ciliated cell differentiation; upregulation of lung ciliated cell differentiation
regulation of lung goblet cell differentiation (GO:1901249)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.
Synonyms: regulation of pulmonary goblet cell differentiation
negative regulation of lung goblet cell differentiation (GO:1901250)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of lung goblet cell differentiation.
Synonyms: down regulation of lung goblet cell differentiation; down regulation of pulmonary goblet cell differentiation; down-regulation of lung goblet cell differentiation; down-regulation of pulmonary goblet cell differentiation; downregulation of lung goblet cell differentiation; downregulation of pulmonary goblet cell differentiation; inhibition of lung goblet cell differentiation; inhibition of pulmonary goblet cell differentiation; negative regulation of pulmonary goblet cell differentiation
positive regulation of lung goblet cell differentiation (GO:1901251)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of lung goblet cell differentiation.
Synonyms: activation of lung goblet cell differentiation; activation of pulmonary goblet cell differentiation; positive regulation of pulmonary goblet cell differentiation; up regulation of lung goblet cell differentiation; up regulation of pulmonary goblet cell differentiation; up-regulation of lung goblet cell differentiation; up-regulation of pulmonary goblet cell differentiation; upregulation of lung goblet cell differentiation; upregulation of pulmonary goblet cell differentiation
regulation of intracellular transport of viral material (GO:1901252)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of egress of virus within host cell.
Synonyms: regulation of egress of virus within host cell; regulation of movement of virus within host cell; regulation of viral egress
positive regulation of intracellular transport of viral material (GO:1901254)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of intracellular transport of viral material.
Synonyms: activation of egress of virus within host cell; activation of movement of virus within host cell; activation of viral egress; positive regulation of egress of virus within host cell; positive regulation of movement of virus within host cell; positive regulation of viral egress; up regulation of egress of virus within host cell; up regulation of movement of virus within host cell; up regulation of viral egress; up-regulation of egress of virus within host cell; up-regulation of movement of virus within host cell; up-regulation of viral egress; upregulation of egress of virus within host cell; upregulation of movement of virus within host cell; upregulation of viral egress
nucleotide-excision repair involved in interstrand cross-link repair (GO:1901255)
Namespace: biological_process
Definition: Any nucleotide-excision repair that is involved in interstrand cross-link repair.
Synonyms: NER involved in ICL repair; NER involved in interstrand cross-link repair; nucleotide-excision repair involved in ICL repair
negative regulation of macrophage colony-stimulating factor production (GO:1901257)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor production.
Synonyms: down regulation of M-CSF production; down regulation of macrophage colony-stimulating factor production; down-regulation of M-CSF production; down-regulation of macrophage colony-stimulating factor production; downregulation of M-CSF production; downregulation of macrophage colony-stimulating factor production; inhibition of M-CSF production; inhibition of macrophage colony-stimulating factor production; negative regulation of M-CSF production
positive regulation of macrophage colony-stimulating factor production (GO:1901258)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor production.
Synonyms: activation of M-CSF production; activation of macrophage colony-stimulating factor production; positive regulation of M-CSF production; up regulation of M-CSF production; up regulation of macrophage colony-stimulating factor production; up-regulation of M-CSF production; up-regulation of macrophage colony-stimulating factor production; upregulation of M-CSF production; upregulation of macrophage colony-stimulating factor production
chloroplast rRNA processing (GO:1901259)
Namespace: biological_process
Definition: Any rRNA processing that takes place in chloroplast.
obsolete peptidyl-lysine hydroxylation involved in bacterial-type EF-P lysine modification (GO:1901260)
Namespace: biological_process
Definition: OBSOLETE. Any peptidyl-lysine hydroxylation that is involved in bacterial-type EF-P lysine modification.
Synonyms: EF-P lysine hydroxylation
Comment: This term was obsoleted because it represents a molecular function.
regulation of sorocarp spore cell differentiation (GO:1901261)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of sorocarp spore cell differentiation.
positive regulation of sorocarp spore cell differentiation (GO:1901263)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of sorocarp spore cell differentiation.
Synonyms: activation of sorocarp spore cell differentiation; up regulation of sorocarp spore cell differentiation; up-regulation of sorocarp spore cell differentiation; upregulation of sorocarp spore cell differentiation
carbohydrate derivative transport (GO:1901264)
Namespace: biological_process
Definition: The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
nucleoside phosphate binding (GO:1901265)
Namespace: molecular_function
Definition: Binding to nucleoside phosphate.
cephalosporin C metabolic process (GO:1901266)
Namespace: biological_process
Definition: The chemical reactions and pathways involving cephalosporin C.
Synonyms: cephalosporin C metabolism
cephalosporin C catabolic process (GO:1901267)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of cephalosporin C.
Synonyms: cephalosporin C breakdown; cephalosporin C catabolism; cephalosporin C degradation
cephalosporin C biosynthetic process (GO:1901268)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of cephalosporin C.
Synonyms: cephalosporin C anabolism; cephalosporin C biosynthesis; cephalosporin C formation; cephalosporin C synthesis
lipooligosaccharide catabolic process (GO:1901270)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of lipooligosaccharide.
Synonyms: lipooligosaccharide breakdown; lipooligosaccharide catabolism; lipooligosaccharide degradation