LiteFold/GO huggingface dataset:
obsolete regulation of RNA binding transcription factor activity (GO:1905255)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of RNA binding transcription factor activity.
Synonyms: regulation of transcription factor activity
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of RNA binding transcription factor activity (GO:1905256)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding transcription factor activity.
Synonyms: down regulation of RNA binding transcription factor activity; down-regulation of RNA binding transcription factor activity; downregulation of RNA binding transcription factor activity; inhibition of RNA binding transcription factor activity
Comment: This term was obsoleted because it represents a molecular function.
obsolete positive regulation of RNA binding transcription factor activity (GO:1905257)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of RNA binding transcription factor activity.
Synonyms: activation of RNA binding transcription factor activity; up regulation of RNA binding transcription factor activity; up-regulation of RNA binding transcription factor activity; upregulation of RNA binding transcription factor activity
Comment: This term was obsoleted because it represents a molecular function.
regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway (GO:1905258)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.
Synonyms: regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; regulation of nitrosative stress-induced apoptosis
negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway (GO:1905259)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.
Synonyms: down regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; down regulation of nitrosative stress-induced apoptosis; down regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway; down-regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; down-regulation of nitrosative stress-induced apoptosis; down-regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway; downregulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; downregulation of nitrosative stress-induced apoptosis; downregulation of nitrosative stress-induced intrinsic apoptotic signaling pathway; inhibition of intrinsic apoptotic signaling pathway in response to nitrosative stress; inhibition of nitrosative stress-induced apoptosis; inhibition of nitrosative stress-induced intrinsic apoptotic signaling pathway; negative regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; negative regulation of nitrosative stress-induced apoptosis
positive regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway (GO:1905260)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.
Synonyms: activation of intrinsic apoptotic signaling pathway in response to nitrosative stress; activation of nitrosative stress-induced apoptosis; activation of nitrosative stress-induced intrinsic apoptotic signaling pathway; positive regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; positive regulation of nitrosative stress-induced apoptosis; up regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; up regulation of nitrosative stress-induced apoptosis; up regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway; up-regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; up-regulation of nitrosative stress-induced apoptosis; up-regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway; upregulation of intrinsic apoptotic signaling pathway in response to nitrosative stress; upregulation of nitrosative stress-induced apoptosis; upregulation of nitrosative stress-induced intrinsic apoptotic signaling pathway
regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (GO:1905261)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.
negative regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (GO:1905262)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.
Synonyms: down regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; down-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; downregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; inhibition of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination
positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (GO:1905263)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.
Synonyms: activation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; up regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; up-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; upregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination
obsolete blasticidin S metabolic process (GO:1905264)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving blasticidin S.
Synonyms: blasticidin S metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
blasticidin S catabolic process (GO:1905265)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of blasticidin S.
Synonyms: blasticidin S breakdown; blasticidin S catabolism; blasticidin S degradation
blasticidin S biosynthetic process (GO:1905266)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of blasticidin S.
Synonyms: blasticidin S anabolism; blasticidin S biosynthesis; blasticidin S formation; blasticidin S synthesis
obsolete endonucleolytic cleavage involved in tRNA processing (GO:1905267)
Namespace: biological_process
Definition: OBSOLETE. Any endonucleolytic RNA phosphodiester bond hydrolysis that is involved in tRNA processing.
Synonyms: RNA phosphodiester bond hydrolysis, endonucleolytic involved in tRNA maturation
Comment: The reason for obsoletion is that the term represents a molecular function.
negative regulation of chromatin organization (GO:1905268)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization.
Synonyms: down regulation of chromatin assembly or disassembly; down regulation of chromatin organisation; down regulation of chromatin organization; down regulation of establishment or maintenance of chromatin architecture; down-regulation of chromatin assembly or disassembly; down-regulation of chromatin organisation; down-regulation of chromatin organization; down-regulation of establishment or maintenance of chromatin architecture; downregulation of chromatin assembly or disassembly; downregulation of chromatin organisation; downregulation of chromatin organization; downregulation of establishment or maintenance of chromatin architecture; inhibition of chromatin assembly or disassembly; inhibition of chromatin organisation; inhibition of chromatin organization; inhibition of establishment or maintenance of chromatin architecture; negative regulation of chromatin assembly or disassembly; negative regulation of chromatin assembly/disassembly; negative regulation of chromatin modification; negative regulation of chromatin organisation; negative regulation of establishment or maintenance of chromatin architecture
positive regulation of chromatin organization (GO:1905269)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of chromatin organization.
Synonyms: activation of chromatin assembly or disassembly; activation of chromatin organisation; activation of chromatin organization; activation of establishment or maintenance of chromatin architecture; positive regulation of chromatin assembly or disassembly; positive regulation of chromatin assembly/disassembly; positive regulation of chromatin modification; positive regulation of chromatin organisation; positive regulation of establishment or maintenance of chromatin architecture; stimulation of chromatin assembly or disassembly; up regulation of chromatin assembly or disassembly; up regulation of chromatin organisation; up regulation of chromatin organization; up regulation of establishment or maintenance of chromatin architecture; up-regulation of chromatin assembly or disassembly; up-regulation of chromatin organisation; up-regulation of chromatin organization; up-regulation of establishment or maintenance of chromatin architecture; upregulation of chromatin assembly or disassembly; upregulation of chromatin organisation; upregulation of chromatin organization; upregulation of establishment or maintenance of chromatin architecture
Meynert cell differentiation (GO:1905270)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized features of a Meynert cell.
obsolete regulation of proton-transporting ATP synthase activity, rotational mechanism (GO:1905271)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.
Synonyms: regulation of H+-transporting ATP synthase activity; regulation of hydrogen ion translocating F-type ATPase activity; regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism; regulation of hydrogen ion transporting two-sector ATPase activity
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of proton-transporting ATP synthase activity, rotational mechanism (GO:1905272)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.
Synonyms: down regulation of H+-transporting ATP synthase activity; down regulation of hydrogen ion translocating F-type ATPase activity; down regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism; down regulation of hydrogen ion transporting two-sector ATPase activity; down regulation of proton-transporting ATP synthase activity, rotational mechanism; down-regulation of H+-transporting ATP synthase activity; down-regulation of hydrogen ion translocating F-type ATPase activity; down-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism; down-regulation of hydrogen ion transporting two-sector ATPase activity; down-regulation of proton-transporting ATP synthase activity, rotational mechanism; downregulation of H+-transporting ATP synthase activity; downregulation of hydrogen ion translocating F-type ATPase activity; downregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism; downregulation of hydrogen ion transporting two-sector ATPase activity; downregulation of proton-transporting ATP synthase activity, rotational mechanism; inhibition of H+-transporting ATP synthase activity; inhibition of hydrogen ion translocating F-type ATPase activity; inhibition of hydrogen ion transporting ATP synthase activity, rotational mechanism; inhibition of hydrogen ion transporting two-sector ATPase activity; inhibition of proton-transporting ATP synthase activity, rotational mechanism; negative regulation of H+-transporting ATP synthase activity; negative regulation of hydrogen ion translocating F-type ATPase activity; negative regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism; negative regulation of hydrogen ion transporting two-sector ATPase activity
Comment: This term was obsoleted because it represents a molecular function.
regulation of modification of postsynaptic actin cytoskeleton (GO:1905274)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.
Synonyms: regulation of postsynaptic actin cytoskeleton remodelling
Rohon-Beard neuron differentiation (GO:1905275)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized features of a Rohon-Beard neuron.
regulation of epithelial tube formation (GO:1905276)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of epithelial tube formation.
Comment: An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay).
negative regulation of epithelial tube formation (GO:1905277)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation.
Synonyms: down regulation of epithelial tube formation; down-regulation of epithelial tube formation; downregulation of epithelial tube formation; inhibition of epithelial tube formation
Comment: An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay).
regulation of retrograde transport, endosome to Golgi (GO:1905279)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of retrograde transport, endosome to Golgi.
Synonyms: regulation of retrograde (endosome to Golgi) transport
negative regulation of retrograde transport, endosome to Golgi (GO:1905280)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of retrograde transport, endosome to Golgi.
Synonyms: down regulation of retrograde (endosome to Golgi) transport; down regulation of retrograde transport, endosome to Golgi; down-regulation of retrograde (endosome to Golgi) transport; down-regulation of retrograde transport, endosome to Golgi; downregulation of retrograde (endosome to Golgi) transport; downregulation of retrograde transport, endosome to Golgi; inhibition of retrograde (endosome to Golgi) transport; inhibition of retrograde transport, endosome to Golgi; negative regulation of retrograde (endosome to Golgi) transport
positive regulation of retrograde transport, endosome to Golgi (GO:1905281)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of retrograde transport, endosome to Golgi.
Synonyms: activation of retrograde (endosome to Golgi) transport; activation of retrograde transport, endosome to Golgi; positive regulation of retrograde (endosome to Golgi) transport; up regulation of retrograde (endosome to Golgi) transport; up regulation of retrograde transport, endosome to Golgi; up-regulation of retrograde (endosome to Golgi) transport; up-regulation of retrograde transport, endosome to Golgi; upregulation of retrograde (endosome to Golgi) transport; upregulation of retrograde transport, endosome to Golgi
obsolete obsolete regulation of epidermal growth factor receptor signaling pathway involved in heart process (GO:1905282)
Namespace: biological_process
Definition: OBSOLETE. OBSOLETE. Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.
Synonyms: regulation of EGF receptor signaling pathway involved in cardiac process; regulation of EGF receptor signaling pathway involved in heart process; regulation of EGF receptor signalling pathway involved in cardiac process; regulation of EGF receptor signalling pathway involved in heart process; regulation of EGFR signaling pathway involved in cardiac process; regulation of EGFR signaling pathway involved in heart process; regulation of epidermal growth factor receptor signaling pathway involved in cardiac process; regulation of epidermal growth factor receptor signalling pathway involved in cardiac process; regulation of epidermal growth factor receptor signalling pathway involved in heart process; regulation of ERBB1 signaling pathway involved in cardiac process; regulation of ERBB1 signaling pathway involved in heart process; regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process; regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
fibrous ring of heart morphogenesis (GO:1905285)
Namespace: biological_process
Definition: The developmental process by which a fibrous ring of heart is generated and organized.
Synonyms: annulus fibrosus cordis morphogenesis; anulus fibrosus cordis morphogenesis; anulus fibrosus of heart morphogenesis; aortic annulus morphogenesis; atrioventricular ring morphogenesis; coronary tendon morphogenesis; Lower's ring morphogenesis
serine-type peptidase complex (GO:1905286)
Namespace: cellular_component
Definition: A protein complex which is capable of serine-type peptidase activity.
Synonyms: Factor VII - TF complex
Comment: An example of this is F7 in human (P08709) in PMID:18640965 (inferred from direct assay).
positive regulation of G2/M transition of mitotic cell cycle involved in cellular response to nitrogen starvation (GO:1905287)
Namespace: biological_process
Definition: Any positive regulation of G2/M transition of mitotic cell cycle that is involved in cellular response to nitrogen starvation.
Synonyms: positive regulation of mitotic entry involved in cellular response to nitrogen starvation
vascular associated smooth muscle cell apoptotic process (GO:1905288)
Namespace: biological_process
Definition: Any apoptotic process in a vascular associated smooth muscle cell.
Synonyms: vascular associated smooth muscle cell apoptosis; vascular smooth muscle cell apoptosis; vascular smooth muscle cell apoptotic process; VSMC apoptosis; VSMC apoptotic process
regulation of CAMKK-AMPK signaling cascade (GO:1905289)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of CAMKK-AMPK signaling cascade.
Synonyms: regulation of stress-activated AMP-activated protein kinase signaling cascade
negative regulation of CAMKK-AMPK signaling cascade (GO:1905290)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of CAMKK-AMPK signaling cascade.
Synonyms: down regulation of CAMKK-AMPK signaling cascade; down regulation of stress-activated AMP-activated protein kinase signaling cascade; down-regulation of CAMKK-AMPK signaling cascade; down-regulation of stress-activated AMP-activated protein kinase signaling cascade; downregulation of CAMKK-AMPK signaling cascade; downregulation of stress-activated AMP-activated protein kinase signaling cascade; inhibition of CAMKK-AMPK signaling cascade; inhibition of stress-activated AMP-activated protein kinase signaling cascade; negative regulation of stress-activated AMP-activated protein kinase signaling cascade
positive regulation of CAMKK-AMPK signaling cascade (GO:1905291)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.
Synonyms: activation of CAMKK-AMPK signaling cascade; activation of stress-activated AMP-activated protein kinase signaling cascade; positive regulation of stress-activated AMP-activated protein kinase signaling cascade; up regulation of CAMKK-AMPK signaling cascade; up regulation of stress-activated AMP-activated protein kinase signaling cascade; up-regulation of CAMKK-AMPK signaling cascade; up-regulation of stress-activated AMP-activated protein kinase signaling cascade; upregulation of CAMKK-AMPK signaling cascade; upregulation of stress-activated AMP-activated protein kinase signaling cascade
negative regulation of neural crest cell differentiation (GO:1905293)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell differentiation.
Synonyms: down regulation of neural crest cell differentiation; down-regulation of neural crest cell differentiation; downregulation of neural crest cell differentiation; inhibition of neural crest cell differentiation
positive regulation of neural crest cell differentiation (GO:1905294)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation.
Synonyms: activation of neural crest cell differentiation; up regulation of neural crest cell differentiation; up-regulation of neural crest cell differentiation; upregulation of neural crest cell differentiation
regulation of neural crest cell fate specification (GO:1905295)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of neural crest cell fate specification.
negative regulation of neural crest cell fate specification (GO:1905296)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell fate specification.
Synonyms: down regulation of neural crest cell fate specification; down-regulation of neural crest cell fate specification; downregulation of neural crest cell fate specification; inhibition of neural crest cell fate specification
positive regulation of neural crest cell fate specification (GO:1905297)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of neural crest cell fate specification.
Synonyms: activation of neural crest cell fate specification; up regulation of neural crest cell fate specification; up-regulation of neural crest cell fate specification; upregulation of neural crest cell fate specification
regulation of intestinal epithelial cell development (GO:1905298)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of intestinal epithelial cell development.
negative regulation of intestinal epithelial cell development (GO:1905299)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of intestinal epithelial cell development.
Synonyms: down regulation of intestinal epithelial cell development; down-regulation of intestinal epithelial cell development; downregulation of intestinal epithelial cell development; inhibition of intestinal epithelial cell development
positive regulation of intestinal epithelial cell development (GO:1905300)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of intestinal epithelial cell development.
Synonyms: activation of intestinal epithelial cell development; up regulation of intestinal epithelial cell development; up-regulation of intestinal epithelial cell development; upregulation of intestinal epithelial cell development