LiteFold/GO huggingface dataset:
intracellular nickel ion homeostasis (GO:0035785)
Namespace: biological_process
Definition: A homeostatic process involved in the maintenance of a steady state level of nickel ions within a cell.
Synonyms: cellular nickel homeostasis; cellular nickel ion homeostasis
cell migration involved in kidney development (GO:0035787)
Namespace: biological_process
Definition: The orderly movement of a cell from one site to another that will contribute to the progression of the kidney over time, from its formation to the mature organ.
cell migration involved in metanephros development (GO:0035788)
Namespace: biological_process
Definition: The orderly movement of a cell from one site to another that will contribute to the progression of the metanephric kidney over time, from its formation to the mature organ.
Synonyms: cell migration involved in metanephric kidney development
metanephric mesenchymal cell migration (GO:0035789)
Namespace: biological_process
Definition: The orderly movement of undifferentiated metanephric mesenchymal cells (precursors to metanephric mesangial cells) from the mesenchyme into the cleft of the developing glomerulus, during development of the metanephros.
Synonyms: metanephric mesenchyme chemotaxis
platelet-derived growth factor receptor-alpha signaling pathway (GO:0035790)
Namespace: biological_process
Definition: The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms: alphaPDGF receptor signaling pathway; PDGF receptor-alpha signaling pathway; PDGFR-alpha signaling pathway; platelet-derived growth factor receptor-alpha signalling pathway
host cell postsynaptic membrane (GO:0035792)
Namespace: cellular_component
Definition: A postsynaptic membrane that is part of a host cell. A postsynaptic membrane is a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters transmit the signal across the synaptic cleft to the postsynaptic membrane.
Synonyms: other organism post-synaptic membrane; other organism postsynaptic membrane
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway (GO:0035793)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of metanephric mesenchymal cell migration resulting from the platelet-derived growth factor receptor-beta signaling pathway.
Synonyms: positive regulation of metanephric mesenchymal cell migration by betaPDGF receptor signaling pathway; positive regulation of metanephric mesenchymal cell migration by PDGF receptor-beta signaling pathway; positive regulation of metanephric mesenchymal cell migration by PDGFR-beta signaling pathway; positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway
positive regulation of mitochondrial membrane permeability (GO:0035794)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.
Synonyms: mitochondrial membrane permeability transition; mitochondrial membrane permeabilization; mitochondrial permeability transition; MPT; positive regulation of transport across mitochondrial membrane
negative regulation of mitochondrial membrane permeability (GO:0035795)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.
Synonyms: mitochondrial membrane impermeability; mitochondrial membrane impermeabilization; negative regulation of transport across mitochondrial membrane
ATP-binding cassette (ABC) transporter complex, transmembrane substrate-binding subunit-containing (GO:0035796)
Namespace: cellular_component
Definition: A complex for the transport of metabolites into the cell, consisting of 4 subunits: a transmembrane substrate-binding protein (known as the S component), and an energy-coupling module that comprises two ATP-binding proteins (known as the A and A' components) and a transmembrane protein (known as the T component). Transport of the substrate across the membrane is driven by the hydrolysis of ATP.
Synonyms: ATP-binding cassette (ABC) transporter complex, ECF-type; energy coupling factor (ECF)-type ABC transporter; energy-coupling factor transporter
Comment: The ECF-type transporters differs from other types of ABC transporters because the substrate-binding subunit lies integral to the membrane.
tellurite methyltransferase activity (GO:0035797)
Namespace: molecular_function
Definition: Catalysis of the reaction: tellurite + S-adenosyl-L-methionine = methanetellurite + S-adenosyl-L-homocysteine.
Synonyms: S-adenosyl-L-methionine-dependent tellurite methyltransferase activity; SAM-dependent tellurite methyltransferase activity; tellurite methylase activity
2-alkenal reductase (NADPH) activity (GO:0035798)
Namespace: molecular_function
Definition: Catalysis of the reaction: n-alkanal + NADP+ = alk-2-enal + NADPH + H+.
Synonyms: NADPH:2-alkenal alpha,beta-hydrogenase activity
ureter maturation (GO:0035799)
Namespace: biological_process
Definition: A developmental process, independent of morphogenetic (shape) change, that is required for the ureter to attain its fully functional state. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.
deubiquitinase activator activity (GO:0035800)
Namespace: molecular_function
Definition: Binds to and increases the activity of a deubiquitinase.
adrenal cortex development (GO:0035801)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the adrenal cortex over time, from its formation to the mature structure. The adrenal cortex is located at the periphery of the adrenal gland and controls glucose and electrolyte metabolism, response to stress and sexual development through the production of different classes of steroid hormones (glucocorticoids, mineralocorticoids and androgens).
Synonyms: adrenal gland cortex development
egg coat formation (GO:0035803)
Namespace: biological_process
Definition: Construction of an egg coat, a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.
Synonyms: VE formation; vitelline envelope formation; zona pellucida assembly; ZP assembly
structural constituent of egg coat (GO:0035804)
Namespace: molecular_function
Definition: The action of a molecule that contributes to the structural integrity of an egg coat. An egg coat is a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.
Synonyms: structural constituent of vitelline envelope; structural constituent of zona pellucida
egg coat (GO:0035805)
Namespace: cellular_component
Definition: A specialized extracellular matrix that surrounds the plasma membrane of the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.
Synonyms: vitelline membrane; zona pellucida
obsolete perturbation of blood coagulation in another organism (GO:0035806)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change that affects blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.
Synonyms: modulation by organism of blood clotting in other organism; modulation by organism of blood coagulation in other organism; modulation of blood coagulation in another organism; modulation of blood coagulation in other organism; perturbation of blood clotting in another organism; regulation by organism of blood clotting in other organism; regulation of blood clotting in other organism; regulation of blood coagulation in other organism
Comment: This term was obsoleted because it is too general.
obsolete induction of blood coagulation in another organism (GO:0035807)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.
Synonyms: induction of blood clotting in another organism; positive regulation by organism of blood clotting in other organism; positive regulation by organism of blood coagulation in other organism; positive regulation of blood clotting in other organism; positive regulation of blood coagulation in another organism; positive regulation of blood coagulation in other organism
Comment: This term was obsoleted because it does not describe whether this is symbiont- or venom-mediated.
meiotic recombination initiation complex (GO:0035808)
Namespace: cellular_component
Definition: A protein complex that initiates the formation of double-strand breaks (DSBs) required for meiotic recombination. Consists of a protein that catalyses formation of the double-strand breaks (Spo11 in S. cerevisiae and Rec12 in S. pombe), and a number of accessory proteins.
regulation of urine volume (GO:0035809)
Namespace: biological_process
Definition: Any process that modulates the amount of urine excreted from the body over a unit of time.
Synonyms: regulation of urinary volume; regulation of urine flow
negative regulation of urine volume (GO:0035811)
Namespace: biological_process
Definition: Any process that decreases the amount of urine excreted from the body over a unit of time.
Synonyms: antidiuresis; decrease in urine flow; reduction of urinary volume
renal sodium excretion (GO:0035812)
Namespace: biological_process
Definition: The elimination of sodium ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.
regulation of renal sodium excretion (GO:0035813)
Namespace: biological_process
Definition: Any process that modulates the amount of sodium excreted in urine over a unit of time.
positive regulation of renal sodium excretion (GO:0035815)
Namespace: biological_process
Definition: Any process that increases the amount of sodium excreted in urine over a unit of time.
Synonyms: natriuresis
Comment: The amount of sodium excreted in urine over a unit of time can be increased by increasing the volume of urine produced (diuresis) and/or by increasing the concentration of sodium in the urine.
obsolete renal water absorption involved in negative regulation of urine volume (GO:0035816)
Namespace: biological_process
Definition: OBSOLETE. Any process where water is taken up from the collecting ducts and proximal and distal loops of the nephron, which acts to decrease the amount of urine that is excreted from the body per unit time.
Comment: The reason for obsoletion is that there are no annotations and should be captured in GO-CAM and annotation extensions.
obsolete renal sodium ion absorption involved in negative regulation of renal sodium excretion (GO:0035817)
Namespace: biological_process
Definition: OBSOLETE. Any process where sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron, which contributes to decreasing the amount of sodium that is excreted in urine per unit time.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
positive regulation of renal sodium excretion by pressure natriuresis (GO:0035819)
Namespace: biological_process
Definition: An increase in the amount of sodium excreted in urine over a unit of time, as a result of pressure natriuresis.
Synonyms: natriuresis resulting from pressure natriuresis
negative regulation of renal sodium excretion by angiotensin (GO:0035820)
Namespace: biological_process
Definition: The process in which angiotensin decreases the amount of sodium that is excreted in urine over a unit of time.
modulation of process of another organism (GO:0035821)
Namespace: biological_process
Definition: A process in which an organism effects a change in a biological process in another organism.
Synonyms: modification of morphology or physiology of other organism; modulation of process of other organism; regulation of morphology of other organism; regulation of morphology or physiology of other organism; regulation of physiological process of other organism; regulation of physiology of other organism
gene conversion (GO:0035822)
Namespace: biological_process
Definition: A DNA recombination process that results in the unidirectional transfer of genetic material from a donor sequence to a highly homologous acceptor. The resulting acceptor sequence is identical to that of the donor.
long tract gene conversion (GO:0035824)
Namespace: biological_process
Definition: A gene conversion process in which a segment of more than 1000 base pairs is transferred from the donor to the acceptor.
homologous recombination (GO:0035825)
Namespace: biological_process
Definition: A DNA recombination process that results in the exchange of an equal amount of genetic material between highly homologous DNA molecules.
Synonyms: chromosomal crossover; interchromosomal DNA recombination; interstrand DNA recombination; reciprocal DNA recombination
obsolete rubidium ion transport (GO:0035826)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of rubidium ions (Rb+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: Rb+ transport; rubidium cation transport
Comment: This term has been obsoleted because it represents an assay, and not a physiological process.
obsolete rubidium ion transmembrane transporter activity (GO:0035827)
Namespace: molecular_function
Definition: OBSOLETE. Enables the transfer of rubidium ions (Rb+) from one side of a membrane to the other.
Synonyms: Rb+ transmembrane transporter activity; rubidium cation transmembrane transporter activity; rubidium transmembrane transporter activity
Comment: This term has been obsoleted because it represents an assay, and not a physiological process.
obsolete renal rubidium ion transport (GO:0035828)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of rubidium ions (Rb+) by the kidney.
Synonyms: renal Rb+ transport; renal rubidium cation transport
Comment: This term has been obsoleted because it represents an assay, and not a physiological process.
obsolete renal rubidium ion absorption (GO:0035829)
Namespace: biological_process
Definition: OBSOLETE. A renal system process in which rubidium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.
Synonyms: renal Rb+ absorption; renal rubidium cation absorption
Comment: This term has been obsoleted because it represents an assay, and not a physiological process.
obsolete palmatine metabolic process (GO:0035830)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving palmatine, a berberine alkaloid found in many plants.
Synonyms: palmatine metabolism
Comment: This term was obsoleted because it is an unnecessary grouping term.
palmatine biosynthetic process (GO:0035831)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of palmatine, a berberine alkaloid found in many plants.
Synonyms: palmatine anabolism; palmatine biosynthesis; palmatine formation; palmatine synthesis
obsolete berbamunine metabolic process (GO:0035832)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving berbamunine, an isoquinoline alkaloid.
Synonyms: berbamunine metabolism
Comment: This term was obsoleted because it is an unnecessary grouping term.
berbamunine biosynthetic process (GO:0035833)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of berbamunine, an isoquinoline alkaloid.
Synonyms: berbamunine anabolism; berbamunine biosynthesis; berbamunine formation; berbamunine synthesis
indole alkaloid metabolic process (GO:0035834)
Namespace: biological_process
Definition: The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton.
Synonyms: indole alkaloid metabolism
indole alkaloid biosynthetic process (GO:0035835)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of an indole alkaloid, an alkaloid containing an indole skeleton.
Synonyms: indole alkaloid anabolism; indole alkaloid biosynthesis; indole alkaloid formation; indole alkaloid synthesis
obsolete ergot alkaloid metabolic process (GO:0035836)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving an ergot alkaloid, an indole alkaloid.
Synonyms: ergot alkaloid metabolism
Comment: This term was obsoleted because it is an unnecessary grouping term.
ergot alkaloid biosynthetic process (GO:0035837)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of an ergot alkaloid.
Synonyms: ergot alkaloid anabolism; ergot alkaloid biosynthesis; ergot alkaloid formation; ergot alkaloid synthesis
growing cell tip (GO:0035838)
Namespace: cellular_component
Definition: The region at either end of the longest axis of a cylindrical or elongated cell, where polarized growth occurs.
Synonyms: growing cell end
non-growing cell tip (GO:0035839)
Namespace: cellular_component
Definition: A cell tip at which no growth takes place. For example, in fission yeast the cell end newly formed by cell division does not grow immediately upon its formation, and lacks actin cytoskeletal structures.
Synonyms: new cell end; non-growing cell end
old growing cell tip (GO:0035840)
Namespace: cellular_component
Definition: A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs. For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.
Synonyms: old growing cell end
new growing cell tip (GO:0035841)
Namespace: cellular_component
Definition: A cell tip that was newly formed at the last cell division, and that has started to grow after the cell has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). New end take-off is when monopolar cells initiate bipolar growth.
Synonyms: new cell tip after activation of bipolar cell growth; post-NETO new cell end; post-NETO new cell tip; post-new end take-off new cell tip
old cell tip after activation of bipolar cell growth (GO:0035842)
Namespace: cellular_component
Definition: A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs, which is part of a cell that has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.
Synonyms: post-NETO old cell end; post-NETO old cell tip; post-new end take-off old cell tip
endonuclear canal (GO:0035843)
Namespace: cellular_component
Definition: A membrane-bound structure present in the nucleus of a spermatozoon. There is variation in the number of endonuclear canals between sperm of different organisms, and some species lack these structures altogether. The endonuclear canal may provide a supporting role for the sperm nucleus, and originates during spermiogenesis from an invagination of the nuclear envelope.
photoreceptor cell outer segment organization (GO:0035845)
Namespace: biological_process
Definition: A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of the outer segment of a photoreceptor cell, a sensory cell that reacts to the presence of light. The outer segment of the photoreceptor cell contains the light-absorbing materials.
Synonyms: photoreceptor cell outer segment organisation; photoreceptor outer segment organization
oviduct epithelium development (GO:0035846)
Namespace: biological_process
Definition: The progression of the oviduct epithelium over time from its initial formation to the mature structure. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism. The oviduct epithelium is the specialized epithelium that lines the oviduct.
Synonyms: fallopian tube epithelium development
uterine epithelium development (GO:0035847)
Namespace: biological_process
Definition: The progression of an epithelium of the uterus over time from its initial formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.
Synonyms: uterus epithelial development
oviduct morphogenesis (GO:0035848)
Namespace: biological_process
Definition: The process in which anatomical structures of the oviduct are generated and organized. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.
Synonyms: fallopian tube morphogenesis
nephric duct elongation (GO:0035849)
Namespace: biological_process
Definition: The process in which the nephric duct grows along its axis. A nephric duct is a tube that drains a primitive kidney.
epithelial cell differentiation involved in kidney development (GO:0035850)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an epithelial cell that characterize the cells of the kidney as it progresses from its formation to the mature state.
Krueppel-associated box domain binding (GO:0035851)
Namespace: molecular_function
Definition: Binding to a Krueppel-associated box (KRAB) domain of a protein. The approximately 75 amino acid KRAB domain is enriched in charged amino acids, and is found in the N-terminal regions of many zinc finger-containing transcription factors.
Synonyms: KRAB domain binding; Krueppel-associated box binding
horizontal cell localization (GO:0035852)
Namespace: biological_process
Definition: Any process in which a horizontal cell is transported to, and/or maintained in, a specific location within the inner nuclear layer (INL) of the retina. A horizontal cell is a neuron that laterally connects other neurons in the inner nuclear layer (INL) of the retina. Targeting of retinal neurons to the appropriate lamina is vital to establish the architecture of the retina.
Synonyms: horizontal cell localisation; horizontal cell positioning; laminar positioning of retinal horizontal cell; retinal horizontal cell positioning