LiteFold/GO huggingface dataset:
skeletal muscle satellite cell proliferation (GO:0014841)
Namespace: biological_process
Definition: The multiplication or reproduction of satellite cells, resulting in the expansion of the cell population. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.
regulation of skeletal muscle satellite cell proliferation (GO:0014842)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of skeletal muscle satellite cell proliferation.
growth factor dependent regulation of skeletal muscle satellite cell proliferation (GO:0014843)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.
stomach body smooth muscle contraction (GO:0014845)
Namespace: biological_process
Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the body of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined.
esophagus smooth muscle contraction (GO:0014846)
Namespace: biological_process
Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the esophagus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The esophagus is the muscular membranous segment between the pharynx and the stomach in the upper gastrointestinal tract.
Synonyms: oesophagus smooth muscle contraction
proximal stomach smooth muscle contraction (GO:0014847)
Namespace: biological_process
Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the proximal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The proximal stomach, composed of the fundus and upper body, shows low frequency, sustained tonic contractions that are responsible for generating a basal pressure within the stomach.
urinary tract smooth muscle contraction (GO:0014848)
Namespace: biological_process
Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary tract. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary tract consists of organs of the body that produce and discharge urine. These include the kidneys, ureters, bladder, and urethra.
ureter smooth muscle contraction (GO:0014849)
Namespace: biological_process
Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the ureter. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder.
response to muscle activity (GO:0014850)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus.
regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction (GO:0014852)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system.
regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction (GO:0014853)
Namespace: biological_process
Definition: Any process, involved in skeletal muscle contraction, that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP). Excitatory postsynaptic potential (EPSP) is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.
Synonyms: regulation of excitatory post-synaptic membrane potential involved in skeletal muscle contraction
response to inactivity (GO:0014854)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.
striated muscle cell proliferation (GO:0014855)
Namespace: biological_process
Definition: The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.
skeletal muscle cell proliferation (GO:0014856)
Namespace: biological_process
Definition: The multiplication or reproduction of skeletal muscle cells, resulting in the expansion of a cell population.
regulation of skeletal muscle cell proliferation (GO:0014857)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation.
positive regulation of skeletal muscle cell proliferation (GO:0014858)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation.
negative regulation of skeletal muscle cell proliferation (GO:0014859)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle cell proliferation.
neurotransmitter secretion involved in regulation of skeletal muscle contraction (GO:0014860)
Namespace: biological_process
Definition: The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin.
Synonyms: neurotransmitter secretion involved in control of skeletal muscle contraction
regulation of skeletal muscle contraction via regulation of action potential (GO:0014861)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes.
Synonyms: regulation of skeletal muscle contraction via membrane action potential
regulation of skeletal muscle contraction by chemo-mechanical energy conversion (GO:0014862)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of skeletal muscle contraction by regulating force and velocity of shortening. The force of skeletal muscle contraction is produced by acto-myosin interaction processes through formation of cross bridges. The shortening leads to reduction of length of muscle fiber and sarcomeres.
detection of inactivity (GO:0014863)
Namespace: biological_process
Definition: The series of events in which a inactivity stimulus is received by a cell or organism and converted into a molecular signal.
detection of muscle activity (GO:0014864)
Namespace: biological_process
Definition: The series of events in which a muscle activity stimulus is received by a cell and converted into a molecular signal.
detection of activity (GO:0014865)
Namespace: biological_process
Definition: The series of events in which an activity stimulus is received by a cell and converted into a molecular signal.
skeletal myofibril assembly (GO:0014866)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells.
obsolete cross bridge cycling involved in regulation of the velocity of shortening in skeletal muscle contraction (GO:0014868)
Namespace: biological_process
Definition: OBSOLETE. A process in which cross bridges are broken and reformed during filament sliding as part of the regulation of the velocity of shortening in skeletal muscle contraction.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
detection of muscle inactivity (GO:0014869)
Namespace: biological_process
Definition: The series of events in which a muscle inactivity stimulus is received by a cell and converted into a molecular signal.
response to muscle inactivity (GO:0014870)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus.
obsolete cross bridge formation involved in regulation of the velocity of shortening in skeletal muscle contraction (GO:0014871)
Namespace: biological_process
Definition: OBSOLETE. The process in which actin and myosin interact, split ATP and generate force during skeletal muscle contraction. This process is one of the components of the regulation of the force of skeletal muscle contraction.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
response to muscle activity involved in regulation of muscle adaptation (GO:0014873)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus. This process occurs as part of the regulation of muscle adaptation.
Synonyms: response to fatigue; response to muscle activity involved in regulation of muscle plasticity
obsolete detection of muscle activity involved in regulation of muscle adaptation (GO:0014875)
Namespace: biological_process
Definition: OBSOLETE. The series of events by which a muscle activity stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.
Synonyms: detection of fatigue
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
response to injury involved in regulation of muscle adaptation (GO:0014876)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a injury. This process occurs as part of the regulation of muscle adaptation.
Synonyms: response to injury involved in regulation of muscle plasticity
obsolete response to muscle inactivity involved in regulation of muscle adaptation (GO:0014877)
Namespace: biological_process
Definition: OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus. This process occurs as part of the regulation of muscle adaptation.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
response to electrical stimulus involved in regulation of muscle adaptation (GO:0014878)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. This process occurs as part of the regulation of muscle adaptation.
Synonyms: response to electrical stimulus involved in regulation of muscle plasticity
obsolete detection of electrical stimulus involved in regulation of muscle adaptation (GO:0014879)
Namespace: biological_process
Definition: OBSOLETE. The series of events by which an electrical stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete regulation of muscle filament sliding involved in regulation of the velocity of shortening in skeletal muscle contraction (GO:0014880)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of muscle filament sliding, and consequently contributes to the regulation of the velocity of shortening of skeletal muscle contraction.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
regulation of myofibril size (GO:0014881)
Namespace: biological_process
Definition: Any process that modulates the size of myofibrils. A myofibril is the contractile element of skeletal and cardiac muscle. It is a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.
Synonyms: change of myofibril size
regulation of myofibril number (GO:0014882)
Namespace: biological_process
Definition: Any process that modulates the number of myofibrils. A myofibril is the contractile element of skeletal and cardiac muscle. It is a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.
Synonyms: change of myofibril number
transition between fast and slow fiber (GO:0014883)
Namespace: biological_process
Definition: The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.
Synonyms: transition between fast and slow fibre; transition fast-slow fiber; transition fast-slow fibre
obsolete detection of muscle inactivity involved in regulation of muscle adaptation (GO:0014884)
Namespace: biological_process
Definition: OBSOLETE. The series of events in which a muscle inactivity stimulus is received by a cell and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete detection of injury involved in regulation of muscle adaptation (GO:0014885)
Namespace: biological_process
Definition: OBSOLETE. The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.
Synonyms: detection of injury involved in regulation of muscle plasticity
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
transition between slow and fast fiber (GO:0014886)
Namespace: biological_process
Definition: The process of conversion of slow-contracting muscle fibers to a faster character. This may involve increasing of contractile rate, fast myosin gene induction, increase in glycolytic metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.
Synonyms: transition between slow and fast fibre; transition slow-fast fiber; transition slow-fast fibre
cardiac muscle adaptation (GO:0014887)
Namespace: biological_process
Definition: The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.
Synonyms: cardiac muscle plasticity
striated muscle adaptation (GO:0014888)
Namespace: biological_process
Definition: Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.
Synonyms: striated muscle plasticity
muscle atrophy (GO:0014889)
Namespace: biological_process
Definition: A process, occurring in the muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.
Comment: GO:0014889 should only be used for annotation when muscle atrophy is a normal physiological process and not a disease process.
smooth muscle atrophy (GO:0014890)
Namespace: biological_process
Definition: A process, occurring in smooth muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.
striated muscle atrophy (GO:0014891)
Namespace: biological_process
Definition: A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.
obsolete response to rest involved in regulation of muscle adaptation (GO:0014893)
Namespace: biological_process
Definition: OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rest stimulus. This process occurs as part of the regulation of muscle adaptation.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
response to denervation involved in regulation of muscle adaptation (GO:0014894)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a denervation stimulus. This process occurs as part of the regulation of muscle adaptation.
smooth muscle hypertrophy (GO:0014895)
Namespace: biological_process
Definition: The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy.
striated muscle hypertrophy (GO:0014897)
Namespace: biological_process
Definition: The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.
cardiac muscle hypertrophy in response to stress (GO:0014898)
Namespace: biological_process
Definition: The physiological enlargement or overgrowth of all or part of the heart muscle due to an increase in size (not length) of individual cardiac muscle fibers, without cell division, as a result of a disturbance in organismal or cellular homeostasis.
cardiac muscle atrophy (GO:0014899)
Namespace: biological_process
Definition: A process, occurring in the heart, in which a decrease in cell mass and then in heart size occurs due to shrinking of the individual cells. The shrinkage is caused by protein degradation.
muscle hyperplasia (GO:0014900)
Namespace: biological_process
Definition: A muscle system process that results in an increase in cell number by cell division, often leading to an increase in the size of an organ.
satellite cell activation involved in skeletal muscle regeneration (GO:0014901)
Namespace: biological_process
Definition: The process that initiates skeletal muscle satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.
myotube differentiation (GO:0014902)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.
myoblast fusion involved in skeletal muscle regeneration (GO:0014905)
Namespace: biological_process
Definition: A process in which non-proliferating myoblasts, after migrating to the site of injury, fuse into existing damaged fibers or fuse to myotubes to form new fibers, as part of the process of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.
myotube cell development involved in skeletal muscle regeneration (GO:0014906)
Namespace: biological_process
Definition: The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. This occurs as part of the process of skeletal muscle regeneration. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.
myotube differentiation involved in skeletal muscle regeneration (GO:0014908)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. This process occurs as part of the process of skeletal muscle regeneration. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.
smooth muscle cell migration (GO:0014909)
Namespace: biological_process
Definition: The orderly movement of a smooth muscle cell from one site to another, often during the development of a multicellular organism.
regulation of smooth muscle cell migration (GO:0014910)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of smooth muscle cell migration.
positive regulation of smooth muscle cell migration (GO:0014911)
Namespace: biological_process
Definition: Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration.