LiteFold/GO huggingface dataset:
obsolete positive regulation of response to DNA damage stimulus (GO:2001022)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of response to DNA damage stimulus.
Synonyms: positive regulation of cellular DNA damage response; positive regulation of cellular response to DNA damage stimulus; positive regulation of DNA damage response; positive regulation of response to genotoxic stress
Comment: The reason for obsoletion is that the meaning of the term is ambiguous; genes annotated to these terms all seem to be part of the response.
regulation of response to drug (GO:2001023)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of response to drug.
Synonyms: regulation of drug resistance; regulation of drug susceptibility/resistance
negative regulation of response to drug (GO:2001024)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of response to drug.
Synonyms: negative regulation of drug resistance; negative regulation of drug susceptibility/resistance
positive regulation of response to drug (GO:2001025)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of response to drug.
Synonyms: positive regulation of drug resistance; positive regulation of drug susceptibility/resistance
regulation of endothelial cell chemotaxis (GO:2001026)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis.
negative regulation of endothelial cell chemotaxis (GO:2001027)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell chemotaxis.
positive regulation of endothelial cell chemotaxis (GO:2001028)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis.
obsolete regulation of cellular glucuronidation (GO:2001029)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of cellular glucuronidation.
Synonyms: regulation of cellular glucuronide biosynthesis; regulation of cellular glucuronide biosynthetic process; regulation of cellular glucuronoside biosynthesis; regulation of cellular glucuronoside biosynthetic process
Comment: The reason for obsoletion is that the term represents a molecular function.
obsolete positive regulation of cellular glucuronidation (GO:2001031)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular glucuronidation.
Synonyms: positive regulation of cellular glucuronide biosynthesis; positive regulation of cellular glucuronide biosynthetic process; positive regulation of cellular glucuronoside biosynthesis; positive regulation of cellular glucuronoside biosynthetic process
Comment: The reason for obsoletion is that the term represents a molecular function.
regulation of double-strand break repair via nonhomologous end joining (GO:2001032)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of double-strand break repair via nonhomologous end joining.
Synonyms: regulation of NHEJ
negative regulation of double-strand break repair via nonhomologous end joining (GO:2001033)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining.
Synonyms: negative regulation of NHEJ
positive regulation of double-strand break repair via nonhomologous end joining (GO:2001034)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.
Synonyms: positive regulation of NHEJ
regulation of tongue muscle cell differentiation (GO:2001035)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of tongue muscle cell differentiation.
negative regulation of tongue muscle cell differentiation (GO:2001036)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of tongue muscle cell differentiation.
positive regulation of tongue muscle cell differentiation (GO:2001037)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of tongue muscle cell differentiation.
regulation of cellular response to drug (GO:2001038)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cellular response to drug.
negative regulation of cellular response to drug (GO:2001039)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to drug.
positive regulation of cellular response to drug (GO:2001040)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of cellular response to drug.
negative regulation of septum digestion after cytokinesis (GO:2001042)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.
Synonyms: negative regulation of cytokinetic cell separation
positive regulation of septum digestion after cytokinesis (GO:2001043)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.
Synonyms: positive regulation of cell separation after cytokinesis; positive regulation of cytokinetic cell separation
regulation of integrin-mediated signaling pathway (GO:2001044)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of integrin-mediated signaling pathway.
Synonyms: regulation of integrin-mediated signalling pathway
negative regulation of integrin-mediated signaling pathway (GO:2001045)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of integrin-mediated signaling pathway.
Synonyms: negative regulation of integrin-mediated signalling pathway
positive regulation of integrin-mediated signaling pathway (GO:2001046)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of integrin-mediated signaling pathway.
Synonyms: positive regulation of integrin-mediated signalling pathway
regulation of tendon cell differentiation (GO:2001049)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of tendon cell differentiation.
Synonyms: regulation of muscle attachment cell differentiation; regulation of tenocyte differentiation
negative regulation of tendon cell differentiation (GO:2001050)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of tendon cell differentiation.
Synonyms: negative regulation of muscle attachment cell differentiation; negative regulation of tenocyte differentiation
positive regulation of tendon cell differentiation (GO:2001051)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of tendon cell differentiation.
Synonyms: positive regulation of muscle attachment cell differentiation; positive regulation of tenocyte differentiation
regulation of mesenchymal cell apoptotic process (GO:2001053)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process.
Synonyms: regulation of mesenchymal cell apoptosis
negative regulation of mesenchymal cell apoptotic process (GO:2001054)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process.
Synonyms: negative regulation of mesenchymal cell apoptosis
positive regulation of mesenchymal cell apoptotic process (GO:2001055)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process.
Synonyms: positive regulation of mesenchymal cell apoptosis
obsolete positive regulation of cysteine-type endopeptidase activity (GO:2001056)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.
Synonyms: positive regulation of lysosomal cysteine-type endopeptidase; positive regulation of thiol endopeptidase activity
Comment: The reason for obsoletion is that this term represents regulation of a molecular function.
reactive nitrogen species metabolic process (GO:2001057)
Namespace: biological_process
Definition: The chemical reactions and pathways involving a reactive nitrogen species.
Synonyms: reactive nitrogen species metabolism; RNS metabolic process; RNS metabolism
obsolete D-tagatose 6-phosphate metabolic process (GO:2001058)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a D-tagatose 6-phosphate.
Synonyms: D-tagatose 6-phosphate metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
D-tagatose 6-phosphate catabolic process (GO:2001059)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of a D-tagatose 6-phosphate.
Synonyms: D-tagatose 6-phosphate catabolism
D-glycero-D-manno-heptose 7-phosphate metabolic process (GO:2001060)
Namespace: biological_process
Definition: The chemical reactions and pathways involving a D-glycero-D-manno-heptose 7-phosphate.
Synonyms: D-glycero-D-manno-heptose 7-phosphate metabolism
D-glycero-D-manno-heptose 7-phosphate biosynthetic process (GO:2001061)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a D-glycero-D-manno-heptose 7-phosphate.
Synonyms: D-glycero-D-manno-heptose 7-phosphate biosynthesis
xylan binding (GO:2001062)
Namespace: molecular_function
Definition: Binding to xylan.
glucomannan binding (GO:2001063)
Namespace: molecular_function
Definition: Binding to glucomannan.
mannan binding (GO:2001065)
Namespace: molecular_function
Definition: Binding to mannan.
Synonyms: mannoglycan binding
amylopectin binding (GO:2001066)
Namespace: molecular_function
Definition: Binding to amylopectin.
pullulan binding (GO:2001067)
Namespace: molecular_function
Definition: Binding to pullulan.
arabinoxylan binding (GO:2001068)
Namespace: molecular_function
Definition: Binding to arabinoxylan.
glycogen binding (GO:2001069)
Namespace: molecular_function
Definition: Binding to glycogen.
Synonyms: animal starch binding; liver starch binding
maltoheptaose binding (GO:2001071)
Namespace: molecular_function
Definition: Binding to maltoheptaose.
galactomannan binding (GO:2001072)
Namespace: molecular_function
Definition: Binding to galactomannan.
cyclodextrin binding (GO:2001073)
Namespace: molecular_function
Definition: Binding to cyclodextrin.
regulation of metanephric ureteric bud development (GO:2001074)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.
negative regulation of metanephric ureteric bud development (GO:2001075)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of metanephric ureteric bud development.
positive regulation of metanephric ureteric bud development (GO:2001076)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of metanephric ureteric bud development.
(1->3),(1->4)-beta-glucan binding (GO:2001077)
Namespace: molecular_function
Definition: Binding to (1->3),(1->4)-beta-glucan.
Synonyms: (1,3),(1,4)-beta-glucan binding; 1->3,1->4-beta-glucan binding; beta-(1,3),(1,4)-glucan binding; beta-(1->3),(1->4)-glucan binding; beta-1,3-1,4-glucan binding; beta-1->3,1->4-glucan binding
(1->6)-beta-D-glucan binding (GO:2001078)
Namespace: molecular_function
Definition: Binding to (1->6)-beta-D-glucan.
Synonyms: (1,6)-beta-D-glucan binding; 1,6-beta-D-glucan binding; 1->6-beta-D-glucan binding; beta-(1,6)-D-glucan binding; beta-(1->6)-D-glucan binding; beta-1,6-D-glucan binding; beta-1->6-D-glucan binding
beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc binding (GO:2001079)
Namespace: molecular_function
Definition: Binding to beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc.
chitosan binding (GO:2001080)
Namespace: molecular_function
Definition: Binding to chitosan.
(1->4)-beta-D-galactan binding (GO:2001081)
Namespace: molecular_function
Definition: Binding to (1->4)-beta-D-galactan.
Synonyms: (1,4)-beta-D-galactan binding
inulin binding (GO:2001082)
Namespace: molecular_function
Definition: Binding to inulin.
alpha-D-glucan binding (GO:2001083)
Namespace: molecular_function
Definition: Binding to alpha-D-glucan.
L-arabinofuranose binding (GO:2001084)
Namespace: molecular_function
Definition: Binding to L-arabinofuranose.
arabinogalactan binding (GO:2001085)
Namespace: molecular_function
Definition: Binding to arabinogalactan.
obsolete laminarabiose transport (GO:2001086)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of a laminarabioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Comment: This term has been obsoleted because it does not represent an evolved process.
sophorose transport (GO:2001087)
Namespace: biological_process
Definition: The directed movement of a sophoroseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
trisaccharide transport (GO:2001088)
Namespace: biological_process
Definition: The directed movement of a trisaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
maltotriose transport (GO:2001089)
Namespace: biological_process
Definition: The directed movement of a maltotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
maltotriulose transport (GO:2001090)
Namespace: biological_process
Definition: The directed movement of a maltotriuloseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
nigerotriose transport (GO:2001091)
Namespace: biological_process
Definition: The directed movement of a nigerotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
arabinotriose transport (GO:2001092)
Namespace: biological_process
Definition: The directed movement of an arabinotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
galactotriose transport (GO:2001093)
Namespace: biological_process
Definition: The directed movement of a galactotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
xylotriose transport (GO:2001094)
Namespace: biological_process
Definition: The directed movement of a xylotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
mannotriose transport (GO:2001095)
Namespace: biological_process
Definition: The directed movement of a mannotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
cellotriose transport (GO:2001096)
Namespace: biological_process
Definition: The directed movement of a cellotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
laminaritriose transport (GO:2001097)
Namespace: biological_process
Definition: The directed movement of a laminaritrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
tetrasaccharide transport (GO:2001098)
Namespace: biological_process
Definition: The directed movement of a tetrasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
maltotetraose transport (GO:2001099)
Namespace: biological_process
Definition: The directed movement of a maltotetraoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
pentasaccharide transport (GO:2001100)
Namespace: biological_process
Definition: The directed movement of a pentasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
hexasaccharide transport (GO:2001102)
Namespace: biological_process
Definition: The directed movement of a hexasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
maltohexaose transport (GO:2001103)
Namespace: biological_process
Definition: The directed movement of a maltohexaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
heptasaccharide transport (GO:2001104)
Namespace: biological_process
Definition: The directed movement of a heptasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
maltoheptaose transport (GO:2001105)
Namespace: biological_process
Definition: The directed movement of a maltoheptaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
obsolete regulation of Rho guanyl-nucleotide exchange factor activity (GO:2001106)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.
Synonyms: regulation of Rho guanine nucleotide exchange factor; regulation of RhoGEF
Comment: This term was obsoleted because it represents a molecular function.
negative regulation of Rho guanyl-nucleotide exchange factor activity (GO:2001107)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.
Synonyms: negative regulation of Rho guanine nucleotide exchange factor; negative regulation of RhoGEF
obsolete positive regulation of Rho guanyl-nucleotide exchange factor activity (GO:2001108)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.
Synonyms: positive regulation of Rho guanine nucleotide exchange factor; positive regulation of RhoGEF
Comment: This term was obsoleted because it represents a molecular function.
regulation of lens epithelial cell proliferation (GO:2001109)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of lens epithelial cell proliferation.
positive regulation of lens epithelial cell proliferation (GO:2001111)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of lens epithelial cell proliferation.
regulation of cellular response to hepatocyte growth factor stimulus (GO:2001112)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.
Synonyms: regulation of cellular response to HGF stimulus
negative regulation of cellular response to hepatocyte growth factor stimulus (GO:2001113)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.
Synonyms: negative regulation of cellular response to HGF stimulus
positive regulation of cellular response to hepatocyte growth factor stimulus (GO:2001114)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.
Synonyms: positive regulation of cellular response to HGF stimulus
obsolete methanopterin-containing compound metabolic process (GO:2001115)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a methanopterin.
Synonyms: methanopterin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
methanopterin-containing compound biosynthetic process (GO:2001116)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a methanopterin.
Synonyms: methanopterin biosynthesis
obsolete tetrahydromethanopterin metabolic process (GO:2001117)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving a tetrahydromethanopterin.
Synonyms: tetrahydromethanopterin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
tetrahydromethanopterin biosynthetic process (GO:2001118)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a tetrahydromethanopterin.
Synonyms: tetrahydromethanopterin biosynthesis
methanofuran metabolic process (GO:2001119)
Namespace: biological_process
Definition: The chemical reactions and pathways involving a methanofuran.
Synonyms: methanofuran metabolism
methanofuran biosynthetic process (GO:2001120)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a methanofuran.
Synonyms: methanofuran biosynthesis
coenzyme gamma-F420-2 biosynthetic process (GO:2001121)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a coenzyme gamma-F420-2.
Synonyms: coenzyme gamma-F420-2 biosynthesis
maltoheptaose metabolic process (GO:2001122)
Namespace: biological_process
Definition: The chemical reactions and pathways involving a maltoheptaose.
Synonyms: maltoheptaose metabolism
maltoheptaose catabolic process (GO:2001123)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of a maltoheptaose.
Synonyms: maltoheptaose catabolism
regulation of translational frameshifting (GO:2001124)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of translational frameshifting.
negative regulation of translational frameshifting (GO:2001125)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of translational frameshifting.
positive regulation of translational frameshifting (GO:2001126)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of translational frameshifting.
methane biosynthetic process from formic acid (GO:2001127)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a methane from a formic acid.
methane biosynthetic process from methylamine (GO:2001128)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a methane from a methylamine.
methane biosynthetic process from dimethylamine (GO:2001129)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a methane from a dimethylamine.
methane biosynthetic process from trimethylamine (GO:2001130)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of a methane from a trimethylamine.