LiteFold/GO huggingface dataset:
establishment of cell polarity involved in ameboidal cell migration (GO:0003365)
Namespace: biological_process
Definition: The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell.
cell-matrix adhesion involved in ameboidal cell migration (GO:0003366)
Namespace: biological_process
Definition: The binding of a cell to the extracellular matrix that contributes to the directed movement of an ameboid cell.
cell-cell adhesion involved in ameboidal cell migration (GO:0003367)
Namespace: biological_process
Definition: The attachment of one ameboid cell to another that contributes to the establishment of cell polarity that is part of the directed movement of one of the cells.
obsolete cell-matrix adhesion involved in mesendodermal cell migration (GO:0003368)
Namespace: biological_process
Definition: OBSOLETE. The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
establishment of cell polarity involved in mesendodermal cell migration (GO:0003369)
Namespace: biological_process
Definition: The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of a mesendodermal cell.
cell-cell adhesion involved in mesendodermal cell migration (GO:0003370)
Namespace: biological_process
Definition: The attachment of mesendodermal cells to each other that contributes to the establishment of cell polarity that is part of the directed movement of the cells of the mesendoderm.
establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration (GO:0003371)
Namespace: biological_process
Definition: Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell.
obsolete establishment or maintenance of cytoskeleton polarity involved in mesendodermal cell migration (GO:0003372)
Namespace: biological_process
Definition: OBSOLETE. Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating mesendodermal cell.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete dynamin family protein polymerization involved in membrane fission (GO:0003373)
Namespace: biological_process
Definition: OBSOLETE. The process of creating dynamin family protein polymers, compounds composed of a large number of dynamin family protein monomers. Dynamin family protein polymers form around lipid tubes and contribute to membrane fission.
Comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
obsolete dynamin family protein polymerization involved in mitochondrial fission (GO:0003374)
Namespace: biological_process
Definition: OBSOLETE. The process of creating dynamin protein family polymers, compounds composed of a large number of dynamin family monomers around a lipid tube of a dividing mitochondrion. Dynamin polymers form around lipid tubes and contribute to membrane fission.
Comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
obsolete regulation of dynamin family protein polymerization involved in membrane fission (GO:0003375)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the rate, frequency, or extent of dynamin family protein polymerization involved in mitochondrial fission.
Comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
sphingosine-1-phosphate receptor signaling pathway (GO:0003376)
Namespace: biological_process
Definition: A G protein-coupled receptor signaling pathway initiated by sphingosine-1-phosphate binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms: S1P receptor signaling pathway; S1P signaling pathway; S1P-activated G-protein coupled receptor signaling pathway; S1P-activated GPCR signaling pathway; S1P-stimulated signal transduction pathway; sphingolipid signaling pathway; sphingolipid signalling pathway
obsolete regulation of apoptosis by sphingosine-1-phosphate signaling pathway (GO:0003377)
Namespace: biological_process
Definition: OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of apoptosis.
Synonyms: regulation of apoptosis by sphingolipid signaling pathway; regulation of apoptosis by sphingolipid signalling pathway
Comment: The reason for obsoletion is that this term represents a GO-CAM model.
obsolete regulation of inflammatory response by sphingosine-1-phosphate signaling pathway (GO:0003378)
Namespace: biological_process
Definition: OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of the inflammatory response.
Synonyms: regulation of inflammatory response by sphingolipid signaling pathway; regulation of inflammatory response by sphingolipid signalling pathway
Comment: The reason for obsoletion is that this term represents a GO-CAM model.
establishment or maintenance of cytoskeleton polarity involved in gastrulation (GO:0003380)
Namespace: biological_process
Definition: Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation.
epithelial cell morphogenesis involved in gastrulation (GO:0003381)
Namespace: biological_process
Definition: The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation.
epithelial cell morphogenesis (GO:0003382)
Namespace: biological_process
Definition: The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.
apical constriction (GO:0003383)
Namespace: biological_process
Definition: The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell.
apical constriction involved in gastrulation (GO:0003384)
Namespace: biological_process
Definition: The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell, contributing to the process of gastrulation.
obsolete cell-cell signaling involved in amphid sensory organ development (GO:0003385)
Namespace: biological_process
Definition: OBSOLETE. Any process that mediates the transfer of information from one cell to another and contributes to the progression of an amphid sensory organ over time, from its formation to the mature state.
Synonyms: cell-cell signalling involved in amphid sensory organ development
amphid sensory organ development (GO:0003386)
Namespace: biological_process
Definition: The progression of the amphid sensory organ over time, from its formation to the mature structure. Amphid sensory organs are the sensory organs of nematodes.
neuron differentiation involved in amphid sensory organ development (GO:0003387)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a neuron that contributes to the progression of the amphid sensory gland.
neuron development involved in amphid sensory organ development (GO:0003388)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a neuron over time, that contributes to the development of the amphid sensory organ.
retrograde extension (GO:0003389)
Namespace: biological_process
Definition: The progression of a neuronal projection over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.
dendrite development by retrograde extension (GO:0003390)
Namespace: biological_process
Definition: The progression of a dendrite over time by the attachment of a part of the neuron to an anchor and the subsequent migration of the cell body away from the anchor point.
Synonyms: dendrite retrograde extension
amphid sensory organ dendrite retrograde extension (GO:0003391)
Namespace: biological_process
Definition: The progression of an amphid sensory organ's neuronal dendrite over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.
obsolete cell adhesion involved in retrograde extension (GO:0003392)
Namespace: biological_process
Definition: OBSOLETE. The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete neuron migration involved in retrograde extension (GO:0003393)
Namespace: biological_process
Definition: OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete cell adhesion involved in dendrite retrograde extension (GO:0003394)
Namespace: biological_process
Definition: OBSOLETE. The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete neuron migration involved in dendrite retrograde extension (GO:0003395)
Namespace: biological_process
Definition: OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete cell adhesion involved in amphid sensory organ dendrite retrograde extension (GO:0003396)
Namespace: biological_process
Definition: OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete neuron migration involved in amphid sensory organ dendrite retrograde extension (GO:0003397)
Namespace: biological_process
Definition: OBSOLETE. The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite of a neuron in the amphid sensory organ.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
glial cell differentiation involved in amphid sensory organ development (GO:0003398)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the amphid sensory organ.
cytoneme morphogenesis (GO:0003399)
Namespace: biological_process
Definition: The process in which the anatomical structures of a cytoneme are shaped. A cytoneme is a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.
regulation of COPII vesicle coating (GO:0003400)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of the addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
axis elongation (GO:0003401)
Namespace: biological_process
Definition: The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.
Synonyms: elongation of an axis
obsolete planar cell polarity pathway involved in axis elongation (GO:0003402)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal to modulate cytoskeletal elements and control cell polarity that contributes to axis elongation.
Comment: The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
optic vesicle formation (GO:0003403)
Namespace: biological_process
Definition: The developmental process pertaining to the initial formation of the optic vesicle from the lateral wall of the forebrain. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup.
optic vesicle morphogenesis (GO:0003404)
Namespace: biological_process
Definition: The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup.
optic vesicle elongation (GO:0003405)
Namespace: biological_process
Definition: The developmental growth that results in the lengthening of the optic vesicle in the posterior direction.
retinal pigment epithelium development (GO:0003406)
Namespace: biological_process
Definition: The progression of the retinal pigment epithelium over time, from its initial formation to the mature structure. The retinal pigment epithelium is the melanin-containing layer of cells between the retina and the choroid that absorbs scattered and reflected light and removes waste products produced by the photoreceptor cells.
Synonyms: RPE development
optic cup formation involved in camera-type eye development (GO:0003408)
Namespace: biological_process
Definition: The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.
optic cup structural organization (GO:0003409)
Namespace: biological_process
Definition: The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.
Synonyms: optic cup structural organisation
anterior rotation of the optic cup (GO:0003410)
Namespace: biological_process
Definition: A 90 degree-rotation of the optic cup resulting in its alignment with the anterior-posterior body axis.
obsolete cell motility involved in camera-type eye morphogenesis (GO:0003411)
Namespace: biological_process
Definition: OBSOLETE. Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis (GO:0003412)
Namespace: biological_process
Definition: The specification and formation of the apicobasal polarity of an epithelial cell that contributes to the shaping of a camera-type eye.
chondrocyte differentiation involved in endochondral bone morphogenesis (GO:0003413)
Namespace: biological_process
Definition: The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage.
chondrocyte hypertrophy (GO:0003415)
Namespace: biological_process
Definition: The growth of a chondrocyte, where growth contributes to the progression of the chondrocyte over time.
endochondral bone growth (GO:0003416)
Namespace: biological_process
Definition: The increase in size or mass of an endochondral bone that contributes to the shaping of the bone.
growth plate cartilage development (GO:0003417)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones as they elongate or grow.
growth plate cartilage chondrocyte differentiation (GO:0003418)
Namespace: biological_process
Definition: The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.
growth plate cartilage chondrocyte proliferation (GO:0003419)
Namespace: biological_process
Definition: The multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.
regulation of growth plate cartilage chondrocyte proliferation (GO:0003420)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.
growth plate cartilage axis specification (GO:0003421)
Namespace: biological_process
Definition: The establishment, maintenance and elaboration of the columnar cartilage along the axis of a long bone that contributes to bone growth.
Synonyms: growth plate cartilage axis determination
growth plate cartilage morphogenesis (GO:0003422)
Namespace: biological_process
Definition: The process in which the anatomical structures of growth plate cartilage are generated and organized.
growth plate cartilage chondrocyte division (GO:0003423)
Namespace: biological_process
Definition: The process resulting in the oriented physical partitioning and separation of a chondrocytes in the growth plate.
obsolete establishment of cell polarity involved in growth plate cartilage chondrocyte division (GO:0003424)
Namespace: biological_process
Definition: OBSOLETE. The cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization that results in the directional division of a growth plate cartilage chondrocyte.
Synonyms: growth plate cartilage chondrocyte polarization
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete establishment of mitotic spindle orientation involved in growth plate cartilage chondrocyte division (GO:0003425)
Namespace: biological_process
Definition: OBSOLETE. A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures and contributes to oriented chondrocyte division in the growth plate.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete obsolete cytoskeleton polarization involved in growth plate cartilage chondrocyte division (GO:0003426)
Namespace: biological_process
Definition: OBSOLETE. OBSOLETE. A process that is carried out at the cellular level which results in the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete regulation of cytoskeleton polarization involved in growth plate cartilage chondrocyte division (GO:0003427)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell that modulates the rate, frequency, or extent of the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.
Synonyms: regulation of cytoskeleton polarization involved in growth plate cartilage chondrocyte division by planar cell polarity pathway
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
growth plate cartilage chondrocyte morphogenesis (GO:0003429)
Namespace: biological_process
Definition: The process in which the structures of a chondrocyte in the growth plate cartilage are generated and organized.
growth plate cartilage chondrocyte growth (GO:0003430)
Namespace: biological_process
Definition: The growth of a growth plate cartilage chondrocyte, where growth contributes to the progression of the chondrocyte over time from one condition to another.
Synonyms: growth plate cartilage chondrocyte hypertrophy
growth plate cartilage chondrocyte development (GO:0003431)
Namespace: biological_process
Definition: The progression of a growth plate cartilage chondrocyte over time from after its fate commitment to the mature cell.
chondrocyte development involved in endochondral bone morphogenesis (GO:0003433)
Namespace: biological_process
Definition: The progression of a chondrocyte over time from after its commitment to its mature state where the chondrocyte will contribute to the shaping of an endochondral bone.
obsolete BMP signaling pathway involved in growth plate cartilage chondrocyte development (GO:0003434)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the progression of a growth plate cartilage chondrocyte over time.
Synonyms: BMP signalling pathway involved in growth plate cartilage chondrocyte development
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete smoothened signaling pathway involved in growth plate cartilage chondrocyte development (GO:0003435)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that contributes to the progression of a growth plate cartilage chondrocyte over time.
Synonyms: hedgehog signaling pathway involved in growth plate cartilage chondrocyte development; hh signaling pathway involved in growth plate cartilage chondrocyte development; smoothened signalling pathway involved in growth plate cartilage chondrocyte development
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete regulation of cell adhesion involved in growth plate cartilage morphogenesis (GO:0003436)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix and contributes to the shaping of the growth plate cartilage of an endochondral bone.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete regulation of cell communication involved in growth plate cartilage morphogenesis (GO:0003437)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of cell communication that contributes to the shaping of the growth plate cartilage.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete Gene_Ontology (GO:0003673)
Namespace: biological_process
Definition: OBSOLETE. A controlled vocabulary that can be applied to all organisms even as knowledge of gene and protein roles in cells is accumulating and changing. GO provides three structured networks of defined terms to describe gene product attributes.
Synonyms: Gene_Ontology
Comment: This term was made obsolete because more specific terms were created.