LiteFold/GO huggingface dataset:
hematopoietic or lymphoid organ development (GO:0048534)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation.
Synonyms: haematopoietic or lymphoid organ development; haemopoietic or lymphoid organ development; hemopoietic or lymphoid organ development
lymph node development (GO:0048535)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes.
Synonyms: lymph gland development
spleen development (GO:0048536)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.
mucosa-associated lymphoid tissue development (GO:0048537)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.
Synonyms: BALT development; bronchial-associated lymphoid tissue development; GALT development; gut-associated lymphoid tissue development; mucosal-associated lymphoid tissue development; NALT development; nasopharyngeal-associated lymphoid tissue development
thymus development (GO:0048538)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.
Comment: Note that this term is reserved for annotation of gene products involved in the formation of the thymus itself, not for gene products involved in T cell differentiation in the thymus or elsewhere.
bone marrow development (GO:0048539)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure.
bursa of Fabricius development (GO:0048540)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the bursa of Fabricius over time, from its formation to the mature structure. The bursa of Fabricius is an organ found in birds involved in B cell differentiation.
Peyer's patch development (GO:0048541)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.
Synonyms: GALT development; gut-associated lymphoid tissue development
phytochrome chromophore biosynthetic process (GO:0048543)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of the phytochrome chromophore. The phytochrome chromophore is a linear tetrapyrrolic prosthetic group covalently attached to the large soluble protein phytochrome. Light absorption by the phytochrome chromophore triggers photoconversion between two spectrally distinct forms of the photoreceptor: Pr, the red light absorbing form, and Pfr, the far red light absorbing form.
Synonyms: phytochrome chromophore anabolism; phytochrome chromophore biosynthesis; phytochrome chromophore formation; phytochrome chromophore synthesis
response to steroid hormone (GO:0048545)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.
Synonyms: response to steroid hormone stimulus
digestive tract morphogenesis (GO:0048546)
Namespace: biological_process
Definition: The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.
Synonyms: alimentary canal morphogenesis; digestive tube morphogenesis; gastrointestinal tract morphogenesis; gut morphogenesis; intestinal morphogenesis
positive regulation of pinocytosis (GO:0048549)
Namespace: biological_process
Definition: Any process that activates, maintains or increases the rate of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.
Synonyms: activation of pinocytosis; stimulation of pinocytosis; up regulation of pinocytosis; up-regulation of pinocytosis; upregulation of pinocytosis
negative regulation of pinocytosis (GO:0048550)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.
Synonyms: down regulation of pinocytosis; down-regulation of pinocytosis; downregulation of pinocytosis; inhibition of pinocytosis
generative cell nucleus (GO:0048555)
Namespace: cellular_component
Definition: The nucleus of the generative cell, a cell contained within the pollen grain that will divide to produce two haploid sperm cells.
Synonyms: male germ cell nucleus; sperm cell nucleus
microsporocyte nucleus (GO:0048556)
Namespace: cellular_component
Definition: The nucleus of the microsporocyte. The microsporocyte is a diploid cell in which meiosis will occur, resulting in four microspores. A microspore is a spore that, in vascular plants, gives rise to a male gametophyte.
Synonyms: microspore mother cell nucleus; pollen mother cell nucleus
embryonic digestive tract morphogenesis (GO:0048557)
Namespace: biological_process
Definition: The process in which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the anatomical structure through which food passes and is processed.
Synonyms: embryonic gut morphogenesis
establishment of floral organ orientation (GO:0048559)
Namespace: biological_process
Definition: The process that determines the orientation of the floral organs with reference to the central axis of the flower.
establishment of anatomical structure orientation (GO:0048560)
Namespace: biological_process
Definition: The process that determines the orientation of an anatomical structure with reference to an axis.
establishment of animal organ orientation (GO:0048561)
Namespace: biological_process
Definition: The process that determines the orientation of an animal organ or tissue with reference to an axis.
embryonic organ morphogenesis (GO:0048562)
Namespace: biological_process
Definition: Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
obsolete post-embryonic animal organ morphogenesis (GO:0048563)
Namespace: biological_process
Definition: OBSOLETE. Morphogenesis, during the post-embryonic phase, of an animal tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
Comment: This term is an unnecessary grouping term.
photosystem I assembly (GO:0048564)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane.
digestive tract development (GO:0048565)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed.
Synonyms: gut development; intestinal development; intestine development
embryonic digestive tract development (GO:0048566)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus.
ectodermal digestive tract morphogenesis (GO:0048567)
Namespace: biological_process
Definition: The process in which the anatomical structures of the ectodermal digestive tract are generated and organized. The ectodermal digestive tract includes those portions of the digestive tract that are derived from ectoderm.
Synonyms: ectodermal gut morphogenesis
obsolete post-embryonic animal organ development (GO:0048569)
Namespace: biological_process
Definition: OBSOLETE. Development, taking place during the post-embryonic phase of an animal tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
Synonyms: post-embryonic animal organogenesis
Comment: This term is an unnecessary grouping term.
notochord morphogenesis (GO:0048570)
Namespace: biological_process
Definition: The process in which the anatomical structures of the notochord are generated and organized. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.
long-day photoperiodism (GO:0048571)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that exceeds a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term long-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness falls short of the number of hours defined by 24 hours minus the critical day length.
Synonyms: response to long-day; response to long-day photoperiod; response to short-night; short-night photoperiodism
short-day photoperiodism (GO:0048572)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that falls short of a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 hours minus the critical day length.
Synonyms: long-night photoperiodism; response to long-night; response to short-day; response to short-day photoperiod
photoperiodism, flowering (GO:0048573)
Namespace: biological_process
Definition: A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light or dark of a given length. The length of the period of light or dark required to initiate the change is set relative to a particular duration known as the 'critical day length'. The critical day length varies between species.
Synonyms: photoperiodic control of flowering time; photoperiodic control of inflorescence development; response to day length, flowering; response to night length, flowering; response to photoperiod, flowering
long-day photoperiodism, flowering (GO:0048574)
Namespace: biological_process
Definition: A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light that exceeds the critical day length. The critical day length varies between species. Although the term is long-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness falls short of the number of hours defined by 24 minus the critical day length.
Synonyms: long-day photoperiodic control of flowering; long-day photoperiodic control of flowering time; long-day photoperiodic control of inflorescence development; response to long-day, flowering; response to short-night, flowering; short-night photoperiodism, flowering
short-day photoperiodism, flowering (GO:0048575)
Namespace: biological_process
Definition: A change from vegetative to reproductive phase as a result of detection of, or exposure to, a period of light that falls short of the critical day length. The critical day length varies between species. Although the term is short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 minus the critical day length.
Synonyms: long-night photoperiodism, flowering; response to long-night, flowering; response to short-day, flowering; short-day photoperiodic control of flowering; short-day photoperiodic control of flowering time; short-day photoperiodic control of inflorescence development
positive regulation of short-day photoperiodism, flowering (GO:0048576)
Namespace: biological_process
Definition: Any process that activates, maintains or increases short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.
Synonyms: activation of short-day photoperiodism, flowering; stimulation of short-day photoperiodism, flowering; up regulation of short-day photoperiodism, flowering; up-regulation of short-day photoperiodism, flowering; upregulation of short-day photoperiodism, flowering
negative regulation of short-day photoperiodism, flowering (GO:0048577)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.
Synonyms: down regulation of short-day photoperiodism, flowering; down-regulation of short-day photoperiodism, flowering; downregulation of short-day photoperiodism, flowering; inhibition of short-day photoperiodism, flowering
positive regulation of long-day photoperiodism, flowering (GO:0048578)
Namespace: biological_process
Definition: Any process that activates, maintains or increases long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.
Synonyms: activation of long-day photoperiodism, flowering; stimulation of long-day photoperiodism, flowering; up regulation of long-day photoperiodism, flowering; up-regulation of long-day photoperiodism, flowering; upregulation of long-day photoperiodism, flowering
negative regulation of long-day photoperiodism, flowering (GO:0048579)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.
Synonyms: down regulation of long-day photoperiodism, flowering; down-regulation of long-day photoperiodism, flowering; downregulation of long-day photoperiodism, flowering; inhibition of long-day photoperiodism, flowering
regulation of post-embryonic development (GO:0048580)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.
negative regulation of post-embryonic development (GO:0048581)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.
Synonyms: down regulation of post-embryonic development; down-regulation of post-embryonic development; downregulation of post-embryonic development; inhibition of post-embryonic development
positive regulation of post-embryonic development (GO:0048582)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.
Synonyms: activation of post-embryonic development; stimulation of post-embryonic development; up regulation of post-embryonic development; up-regulation of post-embryonic development; upregulation of post-embryonic development
regulation of response to stimulus (GO:0048583)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
positive regulation of response to stimulus (GO:0048584)
Namespace: biological_process
Definition: Any process that activates, maintains or increases the rate of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.
Synonyms: activation of response to stimulus; stimulation of response to stimulus; up regulation of response to stimulus; up-regulation of response to stimulus; upregulation of response to stimulus
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
negative regulation of response to stimulus (GO:0048585)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.
Synonyms: down regulation of response to stimulus; down-regulation of response to stimulus; downregulation of response to stimulus; inhibition of response to stimulus
Comment: Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
regulation of long-day photoperiodism, flowering (GO:0048586)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.
regulation of short-day photoperiodism, flowering (GO:0048587)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.
developmental cell growth (GO:0048588)
Namespace: biological_process
Definition: The growth of a cell, where growth contributes to the progression of the cell over time from one condition to another.
Synonyms: developmental growth of a unicellular organism
developmental growth (GO:0048589)
Namespace: biological_process
Definition: The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another.
eye morphogenesis (GO:0048592)
Namespace: biological_process
Definition: The process in which the anatomical structures of the eye are generated and organized.
camera-type eye morphogenesis (GO:0048593)
Namespace: biological_process
Definition: The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
Synonyms: camera-style eye morphogenesis
embryonic camera-type eye morphogenesis (GO:0048596)
Namespace: biological_process
Definition: The process in which the anatomical structures of the eye are generated and organized during embryonic development.
Synonyms: embryonic eye morphogenesis
post-embryonic camera-type eye morphogenesis (GO:0048597)
Namespace: biological_process
Definition: The process in which the anatomical structures of the eye are generated and organized during post-embryonic development.
Synonyms: post-embryonic camera-style eye morphogenesis; post-embryonic eye morphogenesis
embryonic morphogenesis (GO:0048598)
Namespace: biological_process
Definition: The process in which anatomical structures are generated and organized during the embryonic phase. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants.
Synonyms: embryonic anatomical structure morphogenesis
oocyte fate commitment (GO:0048600)
Namespace: biological_process
Definition: The process in which the developmental fate of a cell becomes restricted such that it will develop into an oocyte.