LiteFold/GO huggingface dataset:
obsolete regulation of gene silencing (GO:0060968)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.
Comment: This term was obsoleted because it was too broadly defined and could not be distinguished from 'GO:0040029 regulation of gene expression, epigenetic'.
obsolete negative regulation of gene silencing (GO:0060969)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreases the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.
Comment: This term was obsoleted because its definition was too broad.
embryonic heart tube left/right pattern formation (GO:0060971)
Namespace: biological_process
Definition: The pattern specification process that results in the subdivision of the left/right axis of the embryonic heart tube in space to define an area or volume in which specific patterns of cell differentiation will take place.
left/right pattern formation (GO:0060972)
Namespace: biological_process
Definition: The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.
cell migration involved in heart development (GO:0060973)
Namespace: biological_process
Definition: The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ.
cell migration involved in heart formation (GO:0060974)
Namespace: biological_process
Definition: The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells.
cardioblast migration to the midline involved in heart field formation (GO:0060975)
Namespace: biological_process
Definition: The orderly movement of a cardioblast toward the midline to form the heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
Synonyms: cardiac progenitor cell midline migration; cardioblast midline convergence
coronary vasculature development (GO:0060976)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure.
Synonyms: cardiac blood vessel development; cardiac vasculature development; coronary blood vessel development; heart blood vessel development; heart vasculature development
coronary vasculature morphogenesis (GO:0060977)
Namespace: biological_process
Definition: The process in which the anatomical structures of blood vessels of the heart are generated and organized. The blood vessel is the vasculature carrying blood.
Synonyms: cardiac blood vessel morphogenesis; cardiac vasculature morphogenesis; coronary blood vessel morphogenesis; heart blood vessel morphogenesis; heart vasculature morphogenesis
angiogenesis involved in coronary vascular morphogenesis (GO:0060978)
Namespace: biological_process
Definition: Blood vessel formation in the heart when new vessels emerge from the proliferation of pre-existing blood vessels.
Synonyms: angiogenesis involved in cardiac vascular morphogenesis; angiogenesis involved in heart vascular morphogenesis; coronary blood vessel angiogenesis; coronary vasculature angiogenesis
vasculogenesis involved in coronary vascular morphogenesis (GO:0060979)
Namespace: biological_process
Definition: The differentiation of endothelial cells from progenitor cells that contributes to blood vessel development in the heart, and the de novo formation of blood vessels and tubes.
Synonyms: coronary vasculogenesis; vasculogenesis involved in coronary blood vessel morphogenesis
cell migration involved in coronary vasculogenesis (GO:0060980)
Namespace: biological_process
Definition: The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart.
cell migration involved in coronary angiogenesis (GO:0060981)
Namespace: biological_process
Definition: The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels.
coronary artery morphogenesis (GO:0060982)
Namespace: biological_process
Definition: The process in which the anatomical structures of coronary arteries are generated and organized. Coronary arteries are blood vessels that transport blood to the heart muscle.
epicardium-derived cardiac vascular smooth muscle cell differentiation (GO:0060983)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell derived from the epicardium acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.
epicardium-derived cardiac vascular smooth muscle cell development (GO:0060984)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a cardiac vascular smooth muscle cell that was derived from the epicardium over time, from its formation to the mature state.
epicardium-derived cardiac vascular smooth muscle cell fate commitment (GO:0060985)
Namespace: biological_process
Definition: The commitment of an epicardial cell to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.
endocrine hormone secretion (GO:0060986)
Namespace: biological_process
Definition: The regulated release of a hormone into the circulatory system.
lipid tube (GO:0060987)
Namespace: cellular_component
Definition: A macromolecular complex that contains a tube of lipid surrounded by a protein coat.
lipid tube assembly (GO:0060988)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as they fuse or undergo fission.
Synonyms: lipid tubulation
lipid tube assembly involved in organelle fusion (GO:0060989)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as organelles fuse.
Synonyms: lipid tubulation involved in organelle fusion
lipid tube assembly involved in organelle fission (GO:0060990)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as organelles undergo fission.
Synonyms: lipid tubulation involved in organelle fission
obsolete lipid tube assembly involved in cytokinesis (GO:0060991)
Namespace: biological_process
Definition: OBSOLETE. The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in cytokinesis.
Synonyms: lipid tube assembly involved in cytokinesis; lipid tubulation involved in cytokinesis
Comment: This term was made obsolete because there is no evidence the process exists.
response to fungicide (GO:0060992)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fungicide stimulus. Fungicides are chemicals used to kill fungi.
kidney morphogenesis (GO:0060993)
Namespace: biological_process
Definition: Morphogenesis of a kidney. A kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.
obsolete regulation of transcription from RNA polymerase II promoter involved in kidney development (GO:0060994)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the kidney progresses from its initial formation to the mature state.
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete cell-cell signaling involved in kidney development (GO:0060995)
Namespace: biological_process
Definition: OBSOLETE. Any process that mediates the transfer of information from one cell to another and contributes to the progression of the kidney over time, from its formation to the mature organ.
Synonyms: cell-cell signalling involved in kidney development
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
dendritic spine development (GO:0060996)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
dendritic spine morphogenesis (GO:0060997)
Namespace: biological_process
Definition: The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
regulation of dendritic spine development (GO:0060998)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.
positive regulation of dendritic spine development (GO:0060999)
Namespace: biological_process
Definition: Any process that increases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.
regulation of dendritic spine morphogenesis (GO:0061001)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
negative regulation of dendritic spine morphogenesis (GO:0061002)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
positive regulation of dendritic spine morphogenesis (GO:0061003)
Namespace: biological_process
Definition: Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
obsolete pattern specification involved in kidney development (GO:0061004)
Namespace: biological_process
Definition: OBSOLETE. Any developmental process that results in the creation of defined areas or spaces within the kidney to which cells respond and eventually are instructed to differentiate.
Synonyms: kidney pattern formation; kidney pattern specification; pattern formation involved in kidney development
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
cell differentiation involved in kidney development (GO:0061005)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.
regulation of cell proliferation involved in kidney morphogenesis (GO:0061006)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cell proliferation that contributes to the shaping of the kidney.
hepaticobiliary system process (GO:0061007)
Namespace: biological_process
Definition: A system process carried out by any of the organs or tissues of the hepaticobiliary system. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.
Synonyms: hepatobiliary system process
hepaticobiliary system development (GO:0061008)
Namespace: biological_process
Definition: The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.
Synonyms: hepatobiliary system development
common bile duct development (GO:0061009)
Namespace: biological_process
Definition: The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.
Synonyms: bile duct development; CBD development; EHBD development; extrahepatic bile duct development
gallbladder development (GO:0061010)
Namespace: biological_process
Definition: The progression of the gallbladder over time, from its initial formation to the mature structure. The gallbladder is a cavitated organ that stores bile.
hepatic duct development (GO:0061011)
Namespace: biological_process
Definition: The progression of the hepatic duct over time, from its formation to the mature structure. The hepatic duct is the duct that leads from the liver to the common bile duct.
regulation of mRNA catabolic process (GO:0061013)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
Synonyms: regulation of mRNA decay
snRNA localization to Cajal body (GO:0061016)
Namespace: biological_process
Definition: The directed movement of snRNA, small nuclear ribonucleic acid, to a Cajal body.
hepatoblast differentiation (GO:0061017)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a hepatoblast. A hepatoblast is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into hepatocytes and cholangiocytes.
membrane organization (GO:0061024)
Namespace: biological_process
Definition: A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
Synonyms: cellular membrane organisation; cellular membrane organization; membrane organisation; membrane organization and biogenesis; single-organism membrane organization
membrane fusion (GO:0061025)
Namespace: biological_process
Definition: The membrane organization process that joins two lipid bilayers to form a single membrane.
Synonyms: cellular membrane fusion; single-organism membrane fusion
cardiac muscle tissue regeneration (GO:0061026)
Namespace: biological_process
Definition: The regrowth of cardiac muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.
umbilical cord development (GO:0061027)
Namespace: biological_process
Definition: The process whose specific outcome is the development of the umbilical cord, from its formation to the mature structure. The umbilical cord is an organ or embryonic origin consisting of the 2 umbilical arteries and the one umbilical vein. The umbilical cord connects the cardiovascular system of the fetus to the mother via the placenta.
establishment of endothelial barrier (GO:0061028)
Namespace: biological_process
Definition: The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.
eyelid development in camera-type eye (GO:0061029)
Namespace: biological_process
Definition: The progression of the eyelid in a camera-type eye from its formation to the mature state. The eyelid is a membranous cover that helps protect and lubricate the eye.
epithelial cell differentiation involved in mammary gland alveolus development (GO:0061030)
Namespace: biological_process
Definition: The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland alveolus.
visceral serous pericardium development (GO:0061032)
Namespace: biological_process
Definition: The progression of the visceral serous pericardium from its formation to the mature structure. The visceral serous pericardium is the inner layer of the pericardium.
Synonyms: epicardium development
secretion by lung epithelial cell involved in lung growth (GO:0061033)
Namespace: biological_process
Definition: The controlled release of liquid by a lung epithelial cell that contributes to an increase in size of the lung as part of its development.
Synonyms: fetal lung liquid secretion
regulation of cartilage development (GO:0061035)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.
positive regulation of cartilage development (GO:0061036)
Namespace: biological_process
Definition: Any process that increases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.
negative regulation of cartilage development (GO:0061037)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.
uterus morphogenesis (GO:0061038)
Namespace: biological_process
Definition: The process in which anatomical structures of the uterus are generated and organized.
female gonad morphogenesis (GO:0061040)
Namespace: biological_process
Definition: The process in which a female gonad is generated and organized.
Synonyms: ovary morphogenesis
regulation of wound healing (GO:0061041)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.
vascular wound healing (GO:0061042)
Namespace: biological_process
Definition: Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.
regulation of vascular wound healing (GO:0061043)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.
negative regulation of vascular wound healing (GO:0061044)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.
negative regulation of wound healing (GO:0061045)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.
regulation of branching involved in lung morphogenesis (GO:0061046)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.
positive regulation of branching involved in lung morphogenesis (GO:0061047)
Namespace: biological_process
Definition: Any process that increases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.
negative regulation of branching involved in lung morphogenesis (GO:0061048)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.
cell growth involved in cardiac muscle cell development (GO:0061049)
Namespace: biological_process
Definition: The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.
Synonyms: cardiac muscle cell hypertrophy; cardiomyocyte growth; heart muscle cell growth
regulation of cell growth involved in cardiac muscle cell development (GO:0061050)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.