LiteFold/GO huggingface dataset:
imaginal disc fusion, thorax closure (GO:0046529)
Namespace: biological_process
Definition: The joining of the parts of the wing imaginal discs, giving rise to the adult thorax.
photoreceptor cell differentiation (GO:0046530)
Namespace: biological_process
Definition: The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster.
regulation of photoreceptor cell differentiation (GO:0046532)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.
Synonyms: regulation of photoreceptor differentiation
negative regulation of photoreceptor cell differentiation (GO:0046533)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.
Synonyms: down regulation of photoreceptor cell differentiation; down regulation of photoreceptor differentiation; down-regulation of photoreceptor cell differentiation; down-regulation of photoreceptor differentiation; downregulation of photoreceptor cell differentiation; downregulation of photoreceptor differentiation; inhibition of photoreceptor cell differentiation; inhibition of photoreceptor differentiation; negative regulation of photoreceptor differentiation
positive regulation of photoreceptor cell differentiation (GO:0046534)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.
Synonyms: activation of photoreceptor cell differentiation; activation of photoreceptor differentiation; positive regulation of photoreceptor differentiation; stimulation of photoreceptor cell differentiation; stimulation of photoreceptor differentiation; up regulation of photoreceptor cell differentiation; up regulation of photoreceptor differentiation; up-regulation of photoreceptor cell differentiation; up-regulation of photoreceptor differentiation; upregulation of photoreceptor cell differentiation; upregulation of photoreceptor differentiation
obsolete detection of chemical stimulus involved in sensory perception of umami taste (GO:0046535)
Namespace: biological_process
Definition: OBSOLETE. The series of events required for a umami taste stimulus to be received and converted to a molecular signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates.
Synonyms: perception of umami taste, detection of chemical stimulus; perception of umami taste, sensory transduction of chemical stimulus; sensory detection of chemical stimulus during perception of umami taste; sensory detection of umami taste; sensory transduction of chemical stimulus during perception of umami taste; sensory transduction of umami taste; umami taste detection
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
dosage compensation complex (GO:0046536)
Namespace: cellular_component
Definition: A protein or protein-RNA complex that localizes to one or more of the sex chromosome(s), where it acts to normalize transcription between different sexes.
obsolete 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity (GO:0046537)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction does not require the cofactor 2,3-bisphosphoglycerate.
Comment: The reason for obsoletion is that this term is unnecessarily specific.
obsolete 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity (GO:0046538)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction mechanism uses 2,3-bisphosphoglycerate as a phosphate donor.
Comment: The reason for obsoletion is that this term is unnecessarily specific.
histamine N-methyltransferase activity (GO:0046539)
Namespace: molecular_function
Definition: Catalysis of the reaction: S-adenosyl-L-methionine(1+) + histamine = N(tau)-methylhistamine + S-adenosyl-L-homocysteine + H+.
Synonyms: histamine 1-methyltransferase activity; histamine methyltransferase activity; histamine-methylating enzyme; imidazolemethyltransferase activity; S-adenosyl-L-methionine:histamine N-tele-methyltransferase activity; S-adenosylmethionine-histamine N-methyltransferase activity
U4/U6 x U5 tri-snRNP complex (GO:0046540)
Namespace: cellular_component
Definition: A ribonucleoprotein complex that is formed by the association of the U4/U6 and U5 snRNPs.
Synonyms: U4/U6.U5 snRNP complex
saliva secretion (GO:0046541)
Namespace: biological_process
Definition: The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin.
Synonyms: salivation
development of secondary female sexual characteristics (GO:0046543)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion.
development of secondary male sexual characteristics (GO:0046544)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion.
development of primary female sexual characteristics (GO:0046545)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion.
trans-aconitate 3-methyltransferase activity (GO:0046547)
Namespace: molecular_function
Definition: Catalysis of the reaction: S-adenosyl-L-methionine(1+) + trans-aconitate = (E)-2-(methoxycarbonylmethyl)but-2-enedioate + S-adenosyl-L-homocysteine.
Synonyms: S-adenosyl-L-methionine:(E)-prop-1-ene-1,2,3-tricarboxylate 3'-O-methyltransferase activity
retinal rod cell development (GO:0046548)
Namespace: biological_process
Definition: Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light.
retinal cone cell development (GO:0046549)
Namespace: biological_process
Definition: Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.
obsolete (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine (GO:0046550)
Namespace: biological_process
Definition: OBSOLETE. The modification of asparagine to (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine as found in microcin C7 produced from the mccA gene in E. coli plasmid pMccC7.
Synonyms: (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine anabolism from asparagine; (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine formation from asparagine; (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine synthesis from asparagine
Comment: This term was obsoleted because it represents a molecular function.
retinal cone cell fate commitment (GO:0046551)
Namespace: biological_process
Definition: The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell. A retinal cone cell is one of the two photoreceptor subtypes in a camera-type eye.
photoreceptor cell fate commitment (GO:0046552)
Namespace: biological_process
Definition: The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.
L-malate dehydrogenase (NADP+) activity (GO:0046554)
Namespace: molecular_function
Definition: Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.
Synonyms: (S)-malate:NADP+ oxidoreductase activity; malate NADP dehydrogenase activity; malic dehydrogenase (nicotinamide adenine dinucleotide phosphate); NADP malate dehydrogenase activity; NADP-linked malate dehydrogenase activity; NADP-malate dehydrogenase activity
acetylxylan esterase activity (GO:0046555)
Namespace: molecular_function
Definition: Catalysis of the deacetylation of xylans and xylo-oligosaccharides.
alpha-L-arabinofuranosidase activity (GO:0046556)
Namespace: molecular_function
Definition: Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.
Synonyms: alpha-arabinofuranosidase activity; alpha-arabinosidase activity; alpha-L-arabinanase activity; alpha-L-arabinofuranoside arabinofuranohydrolase activity; alpha-L-arabinofuranoside hydrolase activity; alpha-L-arabinosidase activity; alpha-N-arabinofuranosidase activity; arabinofuranosidase activity; arabinosidase activity; L-arabinosidase activity; polysaccharide alpha-L-arabinofuranosidase activity
glucan endo-1,6-beta-glucosidase activity (GO:0046557)
Namespace: molecular_function
Definition: Catalysis of the random hydrolysis of (1->6) linkages in (1->6)-beta-D-glucans.
Synonyms: 1,6-beta-D-glucan glucanohydrolase activity; beta-1,6-glucan 6-glucanohydrolase activity; beta-1,6-glucan hydrolase activity; beta-1,6-glucanase activity; beta-1,6-glucanase-pustulanase activity; beta-1->6-glucan hydrolase activity; endo-(1,6)-beta-D-glucanase activity; endo-(1->6)-beta-D-glucanase activity; endo-1,6-beta-D-glucanase activity; endo-1,6-beta-glucanase activity; endo-beta-1,6-glucanase activity
arabinan endo-1,5-alpha-L-arabinosidase activity (GO:0046558)
Namespace: molecular_function
Definition: Catalysis of the endohydrolysis of (1->5)-alpha-arabinofuranosidic linkages in (1->5) arabinans.
Synonyms: 1,5-alpha-L-arabinan 1,5-alpha-L-arabinanohydrolase activity; endo-1,5-alpha-L-arabinanase activity; endo-alpha-1,5-arabanase activity; endo-arabanase activity
alpha-glucuronidase activity (GO:0046559)
Namespace: molecular_function
Definition: Catalysis of the reaction: an alpha-D-glucuronoside + H2O = an alcohol + D-glucuronate.
Synonyms: alpha-D-glucosiduronate glucuronohydrolase activity; alpha-glucosiduronase activity
obsolete scytalidopepsin B activity (GO:0046560)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, cleaving Phe24-Phe, but not Leu15-Tyr and Phe25-Tyr in the B chain of insulin.
Synonyms: Ganoderma lucidum aspartic proteinase activity; Ganoderma lucidum carboxyl proteinase activity; Scytalidium aspartic proteinase B activity; Scytalidium lignicolum aspartic proteinase B; scytalidopepsin B activity; SLB
Comment: This term was made obsolete because it represents a gene product.
obsolete penicillopepsin activity (GO:0046561)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity similar to that of pepsin A, preferring hydrophobic residues at P1 and P1', but also cleaving Gly20-Glu in the B chain of insulin. Clots milk, and activates trypsinogen.
Synonyms: acid protease A; Penicillium aspartic proteinase activity; Penicillium caseicolum aspartic proteinase activity; Penicillium citrinum acid proteinase activity; Penicillium citrinum aspartic proteinase activity; Penicillium cyclopium acid proteinase activity; Penicillium duponti aspartic proteinase activity; Penicillium expansum acid proteinase activity; Penicillium expansum aspartic proteinase activity; Penicillium janthinellum acid proteinase activity; Penicillium janthinellum aspartic protease activity; Penicillium janthinellum aspartic proteinase activity; Penicillium roqueforti acid proteinase activity; penicillopepsin activity; peptidase A activity
Comment: This term was made obsolete because it represents a gene product.
beta-D-glucose oxidase activity (GO:0046562)
Namespace: molecular_function
Definition: Catalysis of the reaction: beta-D-glucose + O2 = D-glucono-1,5-lactone + H2O2.
Synonyms: beta-D-glucose:oxygen 1-oxido-reductase activity; beta-D-glucose:oxygen 1-oxidoreductase activity; beta-D-glucose:quinone oxidoreductase activity; corylophyline; D-glucose oxidase activity; D-glucose-1-oxidase activity; deoxin-1; glucose aerodehydrogenase activity; glucose oxidase activity; glucose oxyhydrase activity; GOD activity; microcid; penatin
obsolete methanol oxidase activity (GO:0046563)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: O2 + methanol = H2O2 + formaldehyde.
Comment: This term was obsoleted because EC:1.1.3.31 was deleted from EC as it cannot be distinguished from alcohol oxidase (EC:1.1.3.13).
oxalate decarboxylase activity (GO:0046564)
Namespace: molecular_function
Definition: Catalysis of the reaction: H+ + oxalate = CO2 + formate.
Synonyms: oxalate carboxy-lyase (formate-forming); oxalate carboxy-lyase activity
3-dehydroshikimate dehydratase activity (GO:0046565)
Namespace: molecular_function
Definition: Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.
obsolete DOPA dioxygenase activity (GO:0046566)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the 4,5-ring opening reaction: 3,4-dihydroxyphenylalanine + O2 = 4,5-seco-DOPA. 4,5-seco-DOPA spontaneously recyclizes to form betalamic acid.
Synonyms: dihydroxyphenylalanine dioxygenase activity
Comment: This term was obsoleted because it represents the same reaction as stizolobate synthase activity ; GO:0050297.
aphidicolan-16 beta-ol synthase activity (GO:0046567)
Namespace: molecular_function
Definition: Catalysis of the reaction: 9-alpha-copalyl diphosphate + H2O = aphidicolan-16-beta-ol + diphosphate.
Synonyms: 9-alpha-copalyl-diphosphate diphosphate-lyase (aphidicolan-16-beta-ol-forming)
3-methylbutanal reductase [NAD(P)H] activity (GO:0046568)
Namespace: molecular_function
Definition: Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.
Synonyms: 3-methylbutanal reductase [NAD(P)] activity; 3-methylbutanol:NAD(P) oxidoreductase activity; 3-methylbutyraldehyde reductase activity; isoamyl alcohol oxidase activity
glyoxal oxidase activity (GO:0046569)
Namespace: molecular_function
Definition: Catalysis of the reaction: glyoxal + O2 + H2O = glyoxalate + H2O2.
Synonyms: GLOX
methylthioribulose 1-phosphate dehydratase activity (GO:0046570)
Namespace: molecular_function
Definition: Catalysis of the reaction: S-methyl-5-thio-D-ribulose 1-phosphate = 5-(methylthio)-2,3-dioxopentyl phosphate + H2O.
Synonyms: 1-PMT-ribulose dehydratase activity; 5-methylthioribulose-1-phosphate 4-dehydratase activity; methylthioribulose-1-phosphate dehydratase activity; S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase [5-(methylthio)-2,3-dioxopentyl-phosphate-forming]; S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase activity; S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase[5-(methylthio)-2,3-dioxopentyl-phosphate-forming]
obsolete aspartate-2-keto-4-methylthiobutyrate transaminase activity (GO:0046571)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.
Comment: This term was obsoleted because it represents a specific substrate of branched-chain-amino-acid transaminase activity ; GO:0004084.
versicolorin B synthase activity (GO:0046572)
Namespace: molecular_function
Definition: Catalysis of the reaction: (2S-3S)-versiconal hemiacetal = versicolorin B + H2O.
lactonohydrolase activity (GO:0046573)
Namespace: molecular_function
Definition: Catalysis of the hydrolysis of lactone rings (intramolecular cyclic esters) to produce a hydroxyl group and a carboxyl group.
rhamnogalacturonan acetylesterase activity (GO:0046575)
Namespace: molecular_function
Definition: Catalysis of the removal of acetylesters (as acetate) from galacturonic acid residues in the backbone of rhamnogalacturonan.
rhamnogalacturonan alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide lyase activity (GO:0046576)
Namespace: molecular_function
Definition: Catalysis of the cleavage of rhamnogalacturonan, generating oligosaccharides of the form alpha-D-us-galacturonic acid-(1,2)-alpha-L-rhamnose-(1,4)-alpha-D-galacturonate-(1,2)-L-rhamnose-(1,2)-alpha-L-rhamnose-p-(1,4)-alpha-D-galacturonic acid, terminating at the non-reducing end with a hex-4-enopyranosyluronic acid residue.
Synonyms: rhamnogalacturonase B activity
long-chain-alcohol oxidase activity (GO:0046577)
Namespace: molecular_function
Definition: Catalysis of the reaction: 2 long-chain alcohol + O2 = 2 long-chain aldehyde + 2 H2O.
Synonyms: fatty alcohol oxidase activity; fatty alcohol:oxygen oxidoreductase activity; long-chain fatty acid oxidase activity; long-chain fatty alcohol oxidase activity; long-chain-alcohol:oxygen oxidoreductase activity
regulation of Ras protein signal transduction (GO:0046578)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of Ras protein signal transduction.
positive regulation of Ras protein signal transduction (GO:0046579)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction.
Synonyms: activation of Ras protein signal transduction; stimulation of Ras protein signal transduction; up regulation of Ras protein signal transduction; up-regulation of Ras protein signal transduction; upregulation of Ras protein signal transduction
negative regulation of Ras protein signal transduction (GO:0046580)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of Ras protein signal transduction.
Synonyms: down regulation of Ras protein signal transduction; down-regulation of Ras protein signal transduction; downregulation of Ras protein signal transduction; inhibition of Ras protein signal transduction
monoatomic cation efflux transmembrane transporter activity (GO:0046583)
Namespace: molecular_function
Definition: Enables the transfer of a cation or cations from the inside of the cell to the outside of the cell across a membrane.
Synonyms: cation efflux permease activity; cation efflux transmembrane transporter activity
obsolete enniatin metabolic process (GO:0046584)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving enniatins, any of various cyclodepsipeptide antibiotics from Fusarium species that function as ionophores.
Synonyms: enniatin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping term.
positive regulation of calcium-dependent cell-cell adhesion (GO:0046587)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion.
Synonyms: activation of calcium-dependent cell-cell adhesion; stimulation of calcium-dependent cell-cell adhesion; up regulation of calcium-dependent cell-cell adhesion; up-regulation of calcium-dependent cell-cell adhesion; upregulation of calcium-dependent cell-cell adhesion
ribonuclease T1 activity (GO:0046589)
Namespace: molecular_function
Definition: Catalysis of the endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides ending in Gp with 2',3'-cyclic phosphate intermediates.
Synonyms: Aspergillus oryzae ribonuclease activity; binase activity; guanyl-specific RNase activity; guanyloribonuclease activity; ribonuclease C2; ribonuclease Ch; ribonuclease F1; ribonuclease guaninenucleotido-2'-transferase (cyclizing); ribonuclease N1; ribonuclease N3; ribonuclease PP1; ribonuclease SA; ribonuclease U1; RNase F1; RNase G; RNase N1 activity; RNase N2 activity; RNase Sa; RNase T1; RNase T1 activity
obsolete embryonic leg joint morphogenesis (GO:0046591)
Namespace: biological_process
Definition: OBSOLETE. The process, occurring in the embryo, by which the anatomical structures of the leg joint are generated and organized. A leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner.
Synonyms: embryonic leg joint morphogenesis
Comment: This term was made obsolete because leg is a mechano-functional grouping, and having both 'leg morphogenesis' and 'hindlimb morphogenesis' terms causes errors in querying.
polyamine oxidase activity (GO:0046592)
Namespace: molecular_function
Definition: Catalysis of the oxidative degradation or interconversion of polyamines.
Synonyms: 1-N-acetylspermidine:oxygen oxidoreductase (deaminating); N1-acetylspermidine:oxygen oxidoreductase (deaminating)
mandelonitrile lyase activity (GO:0046593)
Namespace: molecular_function
Definition: Catalysis of the reaction: mandelonitrile = cyanide + benzaldehyde.
Synonyms: (R)-oxynitrilase activity; D-alpha-hydroxynitrile lyase activity; D-oxynitrilase activity; hydroxynitrile lyase activity; mandelonitrile benzaldehyde-lyase (cyanide-forming); mandelonitrile benzaldehyde-lyase activity
maintenance of pole plasm mRNA location (GO:0046594)
Namespace: biological_process
Definition: The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.
Synonyms: maintenance of oocyte pole plasm mRNA localization; maintenance of pole plasm mRNA localization
establishment of pole plasm mRNA localization (GO:0046595)
Namespace: biological_process
Definition: Any process that results in the directed movement of mRNA to the oocyte pole plasm.
Synonyms: establishment of oocyte pole plasm mRNA localization; establishment of pole plasm mRNA localisation
regulation of viral entry into host cell (GO:0046596)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the viral entry into the host cell.
Synonyms: regulation of viral penetration into host cell; viral escort protein
host-mediated suppression of symbiont invasion (GO:0046597)
Namespace: biological_process
Definition: A process in which a host inhibits or disrupts the entry of a symbiont into a host cell.
Synonyms: blocking of symbiont entry into host cell; negative regulation of symbiont entry into host cell; negative regulation of viral entry into host cell; negative regulation of viral penetration into host cell; prevention of symbiont entry into host cell
positive regulation of viral entry into host cell (GO:0046598)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the introduction of viral entry into the host cell.
Synonyms: positive regulation of viral penetration into host cell
regulation of centriole replication (GO:0046599)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the formation of a daughter centriole of an existing centriole.