LiteFold/GO huggingface dataset:
positive regulation of supramolecular fiber organization (GO:1902905)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization.
Synonyms: activation of fibril organisation; activation of fibril organization; positive regulation of fibril organisation; up regulation of fibril organisation; up regulation of fibril organization; up-regulation of fibril organisation; up-regulation of fibril organization; upregulation of fibril organisation; upregulation of fibril organization
Comment: HSPA8, human, P11142 in PMID:23921388 inferred from direct assay to negatively regulate fibrillation of alpha-Syn in vitro
proteasome storage granule assembly (GO:1902906)
Namespace: biological_process
Definition: The aggregation, arrangement and bonding together of a set of components to form a proteasome storage granule.
Synonyms: proteasome storage granule formation; PSG assembly; PSG formation; sequestration of proteasome core complex in proteasome storage granule
proteasome storage granule disassembly (GO:1902907)
Namespace: biological_process
Definition: The disaggregation of a proteasome storage granule into its constituent components.
Synonyms: PSG disassembly
regulation of melanosome transport (GO:1902908)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of melanosome transport.
negative regulation of melanosome transport (GO:1902909)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of melanosome transport.
Synonyms: down regulation of melanosome transport; down-regulation of melanosome transport; downregulation of melanosome transport; inhibition of melanosome transport
positive regulation of melanosome transport (GO:1902910)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of melanosome transport.
Synonyms: activation of melanosome transport; up regulation of melanosome transport; up-regulation of melanosome transport; upregulation of melanosome transport
protein kinase complex (GO:1902911)
Namespace: cellular_component
Definition: A protein complex which is capable of protein kinase activity.
Comment: An example of this is PKM2 in human (P14618) in PMID:24606918 (inferred from direct assay).
pyruvate kinase complex (GO:1902912)
Namespace: cellular_component
Definition: A protein complex which is capable of pyruvate kinase activity.
Comment: An example of this is PKM2 in human (P14618) in PMID:24606918 (inferred from direct assay).
positive regulation of neuroepithelial cell differentiation (GO:1902913)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation.
Synonyms: activation of neuroepithelial cell differentiation; up regulation of neuroepithelial cell differentiation; up-regulation of neuroepithelial cell differentiation; upregulation of neuroepithelial cell differentiation
regulation of protein polyubiquitination (GO:1902914)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of protein polyubiquitination.
Synonyms: regulation of polyubiquitin; regulation of protein polyubiquitinylation; regulation of protein polyubiquitylation
negative regulation of protein polyubiquitination (GO:1902915)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of protein polyubiquitination.
Synonyms: down regulation of polyubiquitin; down regulation of protein polyubiquitination; down regulation of protein polyubiquitinylation; down regulation of protein polyubiquitylation; down-regulation of polyubiquitin; down-regulation of protein polyubiquitination; down-regulation of protein polyubiquitinylation; down-regulation of protein polyubiquitylation; downregulation of polyubiquitin; downregulation of protein polyubiquitination; downregulation of protein polyubiquitinylation; downregulation of protein polyubiquitylation; inhibition of polyubiquitin; inhibition of protein polyubiquitination; inhibition of protein polyubiquitinylation; inhibition of protein polyubiquitylation; negative regulation of polyubiquitin; negative regulation of protein polyubiquitinylation; negative regulation of protein polyubiquitylation
positive regulation of protein polyubiquitination (GO:1902916)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of protein polyubiquitination.
Synonyms: activation of polyubiquitin; activation of protein polyubiquitination; activation of protein polyubiquitinylation; activation of protein polyubiquitylation; positive regulation of polyubiquitin; positive regulation of protein polyubiquitinylation; positive regulation of protein polyubiquitylation; up regulation of polyubiquitin; up regulation of protein polyubiquitination; up regulation of protein polyubiquitinylation; up regulation of protein polyubiquitylation; up-regulation of polyubiquitin; up-regulation of protein polyubiquitination; up-regulation of protein polyubiquitinylation; up-regulation of protein polyubiquitylation; upregulation of polyubiquitin; upregulation of protein polyubiquitination; upregulation of protein polyubiquitinylation; upregulation of protein polyubiquitylation
positive regulation of mating projection assembly (GO:1902917)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of mating projection assembly.
Synonyms: activation of mating projection assembly; activation of mating projection biogenesis; positive regulation of mating projection biogenesis; up regulation of mating projection assembly; up regulation of mating projection biogenesis; up-regulation of mating projection assembly; up-regulation of mating projection biogenesis; upregulation of mating projection assembly; upregulation of mating projection biogenesis
obsolete poly(5-hydroxyvalerate) metabolic process (GO:1902918)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving poly(5-hydroxyvalerate).
Synonyms: poly(5-hydroxyvalerate) metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
poly(5-hydroxyvalerate) biosynthetic process (GO:1902919)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of poly(5-hydroxyvalerate).
Synonyms: poly(5-hydroxyvalerate) anabolism; poly(5-hydroxyvalerate) biosynthesis; poly(5-hydroxyvalerate) formation; poly(5-hydroxyvalerate) synthesis
obsolete poly(hydroxyvalerate) metabolic process (GO:1902920)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving poly(hydroxyvalerate).
Synonyms: poly(hydroxyvalerate) metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
poly(hydroxyvalerate) biosynthetic process (GO:1902921)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of poly(hydroxyvalerate).
Synonyms: poly(hydroxyvalerate) anabolism; poly(hydroxyvalerate) biosynthesis; poly(hydroxyvalerate) formation; poly(hydroxyvalerate) synthesis
obsolete poly(3-hydroxyvalerate) metabolic process (GO:1902922)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving poly(3-hydroxyvalerate).
Synonyms: poly(3-hydroxyvalerate) metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
poly(3-hydroxyvalerate) biosynthetic process (GO:1902923)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).
Synonyms: poly(3-hydroxyvalerate) anabolism; poly(3-hydroxyvalerate) biosynthesis; poly(3-hydroxyvalerate) formation; poly(3-hydroxyvalerate) synthesis
poly(hydroxyalkanoate) biosynthetic process from glucose (GO:1902924)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from glucose.
Synonyms: poly(hydroxyalkanoate) anabolism from glucose; poly(hydroxyalkanoate) biosynthesis from glucose; poly(hydroxyalkanoate) formation from glucose; poly(hydroxyalkanoate) synthesis from glucose
obsolete inulin metabolic process (GO:1902926)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving inulin.
Synonyms: inulin metabolism
Comment: This term was obsoleted because it is an unnecessary grouping class.
inulin catabolic process (GO:1902927)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of inulin.
Synonyms: inulin breakdown; inulin catabolism; inulin degradation
Comment: SUC2 in S. cerevisiae strain JZ1C in PMID:23104410.
inulin biosynthetic process (GO:1902928)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of inulin.
Synonyms: inulin anabolism; inulin biosynthesis; inulin formation; inulin synthesis
Comment: SUC2 in S. cerevisiae strain JZ1C in PMID:23104410.
plasma membrane of growing cell tip (GO:1902929)
Namespace: cellular_component
Definition: Any plasma membrane part that is part of a growing cell tip.
Synonyms: growing cell tip plasma membrane part; plasma membrane part of growing cell end; plasma membrane part of growing cell tip
negative regulation of alcohol biosynthetic process (GO:1902931)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of alcohol biosynthetic process.
Synonyms: down regulation of alcohol anabolism; down regulation of alcohol biosynthesis; down regulation of alcohol biosynthetic process; down regulation of alcohol formation; down regulation of alcohol synthesis; down-regulation of alcohol anabolism; down-regulation of alcohol biosynthesis; down-regulation of alcohol biosynthetic process; down-regulation of alcohol formation; down-regulation of alcohol synthesis; downregulation of alcohol anabolism; downregulation of alcohol biosynthesis; downregulation of alcohol biosynthetic process; downregulation of alcohol formation; downregulation of alcohol synthesis; inhibition of alcohol anabolism; inhibition of alcohol biosynthesis; inhibition of alcohol biosynthetic process; inhibition of alcohol formation; inhibition of alcohol synthesis; negative regulation of alcohol anabolism; negative regulation of alcohol biosynthesis; negative regulation of alcohol formation; negative regulation of alcohol synthesis; negative regulation of solventogenesis
positive regulation of alcohol biosynthetic process (GO:1902932)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of alcohol biosynthetic process.
Synonyms: activation of alcohol anabolism; activation of alcohol biosynthesis; activation of alcohol biosynthetic process; activation of alcohol formation; activation of alcohol synthesis; positive regulation of alcohol anabolism; positive regulation of alcohol biosynthesis; positive regulation of alcohol formation; positive regulation of alcohol synthesis; positive regulation of solventogenesis; up regulation of alcohol anabolism; up regulation of alcohol biosynthesis; up regulation of alcohol biosynthetic process; up regulation of alcohol formation; up regulation of alcohol synthesis; up-regulation of alcohol anabolism; up-regulation of alcohol biosynthesis; up-regulation of alcohol biosynthetic process; up-regulation of alcohol formation; up-regulation of alcohol synthesis; upregulation of alcohol anabolism; upregulation of alcohol biosynthesis; upregulation of alcohol biosynthetic process; upregulation of alcohol formation; upregulation of alcohol synthesis
protein localization to septin ring (GO:1902935)
Namespace: biological_process
Definition: A process in which a protein is transported to, or maintained in, a location within a septin ring.
Synonyms: protein localisation in septin ring; protein localisation to septin ring; protein localization in septin ring
phosphatidylinositol bisphosphate binding (GO:1902936)
Namespace: molecular_function
Definition: Binding to phosphatidylinositol bisphosphate.
Comment: An example of this is KCNJ2 in human (P63252) in PMID:18690034 (inferred from direct assay)
obsolete regulation of intracellular calcium activated chloride channel activity (GO:1902938)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of intracellular calcium activated chloride channel activity.
Comment: The reason for obsoletion is that this term represents regulation of a molecular function.
obsolete negative regulation of intracellular calcium activated chloride channel activity (GO:1902939)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of intracellular calcium activated chloride channel activity.
Synonyms: down regulation of intracellular calcium activated chloride channel activity; down-regulation of intracellular calcium activated chloride channel activity; downregulation of intracellular calcium activated chloride channel activity; inhibition of intracellular calcium activated chloride channel activity
Comment: The reason for obsoletion is that this term represents regulation of a molecular function.
obsolete positive regulation of intracellular calcium activated chloride channel activity (GO:1902940)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of intracellular calcium activated chloride channel activity.
Synonyms: activation of intracellular calcium activated chloride channel activity; up regulation of intracellular calcium activated chloride channel activity; up-regulation of intracellular calcium activated chloride channel activity; upregulation of intracellular calcium activated chloride channel activity
Comment: The reason for obsoletion is that this term represents regulation of a molecular function.
obsolete regulation of voltage-gated chloride channel activity (GO:1902941)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of voltage-gated chloride channel activity.
Synonyms: regulation of voltage gated chloride channel activity; regulation of voltage-dependent chloride channel activity
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of voltage-gated chloride channel activity (GO:1902942)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated chloride channel activity.
Synonyms: down regulation of voltage gated chloride channel activity; down regulation of voltage-dependent chloride channel activity; down regulation of voltage-gated chloride channel activity; down-regulation of voltage gated chloride channel activity; down-regulation of voltage-dependent chloride channel activity; down-regulation of voltage-gated chloride channel activity; downregulation of voltage gated chloride channel activity; downregulation of voltage-dependent chloride channel activity; downregulation of voltage-gated chloride channel activity; inhibition of voltage gated chloride channel activity; inhibition of voltage-dependent chloride channel activity; inhibition of voltage-gated chloride channel activity; negative regulation of voltage gated chloride channel activity; negative regulation of voltage-dependent chloride channel activity
Comment: This term was obsoleted because it represents a molecular function.
positive regulation of voltage-gated chloride channel activity (GO:1902943)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of voltage-gated chloride channel activity.
Synonyms: activation of voltage gated chloride channel activity; activation of voltage-dependent chloride channel activity; activation of voltage-gated chloride channel activity; positive regulation of voltage gated chloride channel activity; positive regulation of voltage-dependent chloride channel activity; up regulation of voltage gated chloride channel activity; up regulation of voltage-dependent chloride channel activity; up regulation of voltage-gated chloride channel activity; up-regulation of voltage gated chloride channel activity; up-regulation of voltage-dependent chloride channel activity; up-regulation of voltage-gated chloride channel activity; upregulation of voltage gated chloride channel activity; upregulation of voltage-dependent chloride channel activity; upregulation of voltage-gated chloride channel activity
obsolete aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process (GO:1902944)
Namespace: molecular_function
Definition: OBSOLETE. Any aspartic-type endopeptidase activity that is involved in amyloid precursor protein catabolic process.
Synonyms: aspartate protease activity involved in amyloid precursor protein breakdown; aspartate protease activity involved in amyloid precursor protein catabolic process; aspartate protease activity involved in amyloid precursor protein catabolism; aspartate protease activity involved in amyloid precursor protein degradation; aspartate protease activity involved in APP catabolic process; aspartate protease activity involved in APP catabolism; aspartic endopeptidase activity involved in amyloid precursor protein breakdown; aspartic endopeptidase activity involved in amyloid precursor protein catabolic process; aspartic endopeptidase activity involved in amyloid precursor protein catabolism; aspartic endopeptidase activity involved in amyloid precursor protein degradation; aspartic endopeptidase activity involved in APP catabolic process; aspartic endopeptidase activity involved in APP catabolism; aspartic protease activity involved in amyloid precursor protein breakdown; aspartic protease activity involved in amyloid precursor protein catabolic process; aspartic protease activity involved in amyloid precursor protein catabolism; aspartic protease activity involved in amyloid precursor protein degradation; aspartic protease activity involved in APP catabolic process; aspartic protease activity involved in APP catabolism; aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown; aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism; aspartic-type endopeptidase activity involved in amyloid precursor protein degradation; aspartic-type endopeptidase activity involved in APP catabolic process; aspartic-type endopeptidase activity involved in APP catabolism; aspartyl protease activity involved in amyloid precursor protein breakdown; aspartyl protease activity involved in amyloid precursor protein catabolic process; aspartyl protease activity involved in amyloid precursor protein catabolism; aspartyl protease activity involved in amyloid precursor protein degradation; aspartyl protease activity involved in APP catabolic process; aspartyl protease activity involved in APP catabolism; carboxyl protease activity involved in amyloid precursor protein breakdown; carboxyl protease activity involved in amyloid precursor protein catabolic process; carboxyl protease activity involved in amyloid precursor protein catabolism; carboxyl protease activity involved in amyloid precursor protein degradation; carboxyl protease activity involved in APP catabolic process; carboxyl protease activity involved in APP catabolism
Comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
metalloendopeptidase activity involved in amyloid precursor protein catabolic process (GO:1902945)
Namespace: molecular_function
Definition: Any metalloendopeptidase activity that is involved in amyloid precursor protein catabolic process.
Synonyms: metalloendopeptidase activity involved in amyloid precursor protein breakdown; metalloendopeptidase activity involved in amyloid precursor protein catabolism; metalloendopeptidase activity involved in amyloid precursor protein degradation; metalloendopeptidase activity involved in APP catabolic process; metalloendopeptidase activity involved in APP catabolism; metalloendoprotease activity involved in amyloid precursor protein breakdown; metalloendoprotease activity involved in amyloid precursor protein catabolic process; metalloendoprotease activity involved in amyloid precursor protein catabolism; metalloendoprotease activity involved in amyloid precursor protein degradation; metalloendoprotease activity involved in APP catabolic process; metalloendoprotease activity involved in APP catabolism; metalloendoproteinase activity involved in amyloid precursor protein breakdown; metalloendoproteinase activity involved in amyloid precursor protein catabolic process; metalloendoproteinase activity involved in amyloid precursor protein catabolism; metalloendoproteinase activity involved in amyloid precursor protein degradation; metalloendoproteinase activity involved in APP catabolic process; metalloendoproteinase activity involved in APP catabolism
protein localization to early endosome (GO:1902946)
Namespace: biological_process
Definition: A process in which a protein is transported to, or maintained in, a location within an early endosome.
Synonyms: protein localisation in early endosome; protein localisation to early endosome; protein localization in early endosome
obsolete regulation of tau-protein kinase activity (GO:1902947)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of tau-protein kinase activity.
Synonyms: regulation of [Tau protein] kinase activity; regulation of ATP:tau-protein O-phosphotransferase activity; regulation of brain protein kinase PK40erk activity; regulation of cdk5/p20; regulation of CDK5/p23; regulation of glycogen synthase kinase-3beta activity; regulation of GSK; regulation of protein tau kinase activity; regulation of STK31; regulation of tau kinase activity; regulation of tau protein kinase activity; regulation of tau-protein kinase I activity; regulation of tau-protein kinase II activity; regulation of tau-tubulin kinase activity; regulation of TPK; regulation of TPK I; regulation of TPK II; regulation of TTK
Comment: This term was obsoleted because it represents a molecular function. Consider molecular function regulator activity ; GO:0098772 or a child.
regulation of dendritic spine maintenance (GO:1902950)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of dendritic spine maintenance.
negative regulation of dendritic spine maintenance (GO:1902951)
Namespace: biological_process
Definition: Any process that stops, prevents or reduces the frequency, rate or extent of dendritic spine maintenance.
Synonyms: down regulation of dendritic spine maintenance; down-regulation of dendritic spine maintenance; downregulation of dendritic spine maintenance; inhibition of dendritic spine maintenance
positive regulation of dendritic spine maintenance (GO:1902952)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of dendritic spine maintenance.
Synonyms: activation of dendritic spine maintenance; up regulation of dendritic spine maintenance; up-regulation of dendritic spine maintenance; upregulation of dendritic spine maintenance