LiteFold/GO huggingface dataset:
negative regulation of smooth endoplasmic reticulum calcium ion concentration (GO:0051565)
Namespace: biological_process
Definition: Any process that decreases the concentration of calcium ions in the smooth endoplasmic reticulum.
Synonyms: reduction of calcium ion concentration in smooth endoplasmic reticulum; reduction of calcium ion concentration in smooth ER; reduction of smooth endoplasmic reticulum calcium ion concentration; reduction of smooth ER calcium ion concentration; smooth endoplasmic reticulum calcium ion concentration reduction; smooth ER calcium ion concentration reduction
anthocyanidin 3-glucoside rhamnosyltransferase activity (GO:0051566)
Namespace: molecular_function
Definition: Catalysis of the reaction: anthocyanidin 3-glucoside + UDP-rhamnose = anthocyanidin 3-rutinoside + UDP.
Synonyms: 3RT activity; anthocyanidin 3-glucoside-rhamnosyltransferase activity
obsolete histone H3-K9 methylation (GO:0051567)
Namespace: biological_process
Definition: OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.
Synonyms: histone H3 K9 methylation; histone H3K9me; histone lysine H3 K9 methylation
Comment: This term was obsoleted because it represents a molecular function.
obsolete histone H3-K4 methylation (GO:0051568)
Namespace: biological_process
Definition: OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 4 of the histone.
Synonyms: histone H3 K4 methylation; histone H3K4me; histone lysine H3 K4 methylation
Comment: This term was obsoleted because it represents a molecular function.
obsolete regulation of histone H3-K4 methylation (GO:0051569)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
Comment: This term was obsoleted because it represents a molecular function.
obsolete regulation of histone H3-K9 methylation (GO:0051570)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.
Comment: This term was obsoleted because it represents a molecular function.
obsolete positive regulation of histone H3-K4 methylation (GO:0051571)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
Synonyms: activation of histone H3-K4 methylation; stimulation of histone H3-K4 methylation; up regulation of histone H3-K4 methylation; up-regulation of histone H3-K4 methylation; upregulation of histone H3-K4 methylation
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of histone H3-K4 methylation (GO:0051572)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
Synonyms: down regulation of histone H3-K4 methylation; down-regulation of histone H3-K4 methylation; downregulation of histone H3-K4 methylation; inhibition of histone H3-K4 methylation
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of histone H3-K9 methylation (GO:0051573)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.
Synonyms: down regulation of histone H3-K9 methylation; down-regulation of histone H3-K9 methylation; downregulation of histone H3-K9 methylation; inhibition of histone H3-K9 methylation
Comment: This term was obsoleted because it represents a molecular function.
obsolete positive regulation of histone H3-K9 methylation (GO:0051574)
Namespace: biological_process
Definition: OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.
Synonyms: activation of histone H3-K9 methylation; stimulation of histone H3-K9 methylation; up regulation of histone H3-K9 methylation; up-regulation of histone H3-K9 methylation; upregulation of histone H3-K9 methylation
Comment: This term was obsoleted because it represents a molecular function.
5'-deoxyribose-5-phosphate lyase activity (GO:0051575)
Namespace: molecular_function
Definition: Catalysis of the reaction: a 5'-end 2'-deoxyribose-2'-deoxyribonucleotide-DNA = (2E,4S)-4-hydroxypenten-2-al-5-phosphate + a 5'-end 5'-phospho-2'-deoxyribonucleoside-DNA + H+.
Synonyms: 5'-deoxyribose phosphate activity; dRP lyase activity; dRPase activity
regulation of neurotransmitter uptake (GO:0051580)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.
Synonyms: regulation of neurotransmitter import; regulation of neurotransmitter reuptake
negative regulation of neurotransmitter uptake (GO:0051581)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.
Synonyms: down regulation of neurotransmitter uptake; down-regulation of neurotransmitter uptake; downregulation of neurotransmitter uptake; negative regulation of neurotransmitter import
positive regulation of neurotransmitter uptake (GO:0051582)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.
Synonyms: activation of neurotransmitter uptake; positive regulation of neurotransmitter import; stimulation of neurotransmitter uptake; up regulation of neurotransmitter uptake; up-regulation of neurotransmitter uptake; upregulation of neurotransmitter uptake
dopamine uptake involved in synaptic transmission (GO:0051583)
Namespace: biological_process
Definition: The directed movement of dopamine into a presynaptic neuron or glial cell. In this context, dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.
Synonyms: dopamine import involved in synaptic transmission; dopamine reuptake involved in synaptic transmission
regulation of dopamine uptake involved in synaptic transmission (GO:0051584)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell.
Synonyms: regulation of dopamine import involved in synaptic transmission
negative regulation of dopamine uptake involved in synaptic transmission (GO:0051585)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of dopamine into a presynaptic neuron or glial cell.
Synonyms: down regulation of dopamine uptake involved in synaptic transmission; down-regulation of dopamine uptake involved in synaptic transmission; downregulation of dopamine uptake involved in synaptic transmission; negative regulation of dopamine import involved in synaptic transmission
positive regulation of dopamine uptake involved in synaptic transmission (GO:0051586)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell.
Synonyms: activation of dopamine uptake involved in synaptic transmission; positive regulation of dopamine import involved in synaptic transmission; stimulation of dopamine uptake involved in synaptic transmission; up regulation of dopamine uptake involved in synaptic transmission; up-regulation of dopamine uptake involved in synaptic transmission; upregulation of dopamine uptake involved in synaptic transmission
obsolete inhibition of dopamine uptake involved in synaptic transmission (GO:0051587)
Namespace: biological_process
Definition: OBSOLETE. Any process that prevents the activation of the directed movement of dopamine into a cell.
Synonyms: inhibition of dopamine import involved in synaptic transmission
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
regulation of neurotransmitter transport (GO:0051588)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
negative regulation of neurotransmitter transport (GO:0051589)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: down regulation of neurotransmitter transport; down-regulation of neurotransmitter transport; downregulation of neurotransmitter transport; inhibition of neurotransmitter transport
positive regulation of neurotransmitter transport (GO:0051590)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: activation of neurotransmitter transport; stimulation of neurotransmitter transport; up regulation of neurotransmitter transport; up-regulation of neurotransmitter transport; upregulation of neurotransmitter transport
response to cAMP (GO:0051591)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.
Synonyms: response to 3',5' cAMP; response to 3',5'-cAMP; response to adenosine 3',5'-cyclophosphate; response to cyclic AMP
response to calcium ion (GO:0051592)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
Synonyms: response to Ca2+ ion
response to folic acid (GO:0051593)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.
Synonyms: cellular response to folate; cellular response to vitamin B9
detection of glucose (GO:0051594)
Namespace: biological_process
Definition: The series of events in which a glucose stimulus is received by a cell and converted into a molecular signal.
Synonyms: glucose detection; glucose perception; glucose sensing
response to methylglyoxal (GO:0051595)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylglyoxal stimulus. Methylglyoxal is a 2-oxoaldehyde derived from propanal.
Synonyms: response to pyruvaldehyde
methylglyoxal catabolic process (GO:0051596)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.
Synonyms: methylglyoxal breakdown; methylglyoxal catabolism; methylglyoxal degradation
response to methylmercury (GO:0051597)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.
Synonyms: response to CH3-Hg+; response to MeHg+
meiotic recombination checkpoint signaling (GO:0051598)
Namespace: biological_process
Definition: A signaling process that contributes to a meiotic recombination checkpoint, that acts during late prophase I (pachytene) and prevents segregation of homologous chromosomes until recombination is completed, ensuring proper distribution of the genetic material to the gametes.
Synonyms: meiotic recombination checkpoint; pachytene checkpoint; signal transduction involved in meiotic recombination checkpoint
response to hydrostatic pressure (GO:0051599)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.
Synonyms: response to biomechanical stress; response to static fluid pressure
obsolete regulation of endocytosis by exocyst localization (GO:0051600)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an exocyst is transported to, or maintained in, a specific location that results in the modulation of endocytosis. An exocyst is a protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse.
Synonyms: regulation of endocytosis by exocyst localisation; regulation of site selection of endocytosis; relocation of endocytosis; spatial regulation of endocytosis
Comment: The reason for obsoletion is that this represents a phenotype.
response to electrical stimulus (GO:0051602)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.
Synonyms: response to electricity
obsolete proteolysis involved in protein catabolic process (GO:0051603)
Namespace: biological_process
Definition: OBSOLETE. The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Synonyms: peptidolysis during cellular protein catabolic process; peptidolysis during cellular protein catabolism; peptidolysis involved in cellular protein catabolic process; peptidolysis involved in cellular protein catabolism; proteolysis during cellular protein catabolic process; proteolysis during cellular protein catabolism; proteolysis involved in cellular protein catabolic process
Comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
protein maturation (GO:0051604)
Namespace: biological_process
Definition: Any process leading to the attainment of the full functional capacity of a protein.
detection of stimulus (GO:0051606)
Namespace: biological_process
Definition: The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal.
Synonyms: perception of stimulus; stimulus detection; stimulus sensing
defense response to virus (GO:0051607)
Namespace: biological_process
Definition: Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
Synonyms: antiviral response; defence response to virus; defense response to viruses
histamine transport (GO:0051608)
Namespace: biological_process
Definition: The directed movement of histamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.
inhibition of neurotransmitter uptake (GO:0051609)
Namespace: biological_process
Definition: Any process that prevents the activation of the directed movement of a neurotransmitter into a cell.
Synonyms: inhibition of neurotransmitter import
serotonin uptake (GO:0051610)
Namespace: biological_process
Definition: The directed movement of serotonin into a cell, typically presynaptic neurons or glial cells. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.
Synonyms: 5-HT uptake; 5-hydroxytryptamine uptake; 5HT uptake; serotonin import
regulation of serotonin uptake (GO:0051611)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of the monoamine neurotransmitter serotonin into a cell.
Synonyms: regulation of 5-HT uptake; regulation of 5-hydroxytryptamine uptake; regulation of 5HT uptake; regulation of serotonin import
positive regulation of serotonin uptake (GO:0051613)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of serotonin into a cell.
Synonyms: activation of serotonin uptake; positive regulation of 5-HT uptake; positive regulation of 5-hydroxytryptamine uptake; positive regulation of 5HT uptake; positive regulation of serotonin import; stimulation of serotonin uptake; up regulation of serotonin uptake; up-regulation of serotonin uptake; upregulation of serotonin uptake
inhibition of serotonin uptake (GO:0051614)
Namespace: biological_process
Definition: Any process that prevents the activation of the directed movement of serotonin into a cell.
Synonyms: inhibition of 5-HT uptake; inhibition of 5-hydroxytryptamine uptake; inhibition of 5HT uptake; inhibition of serotonin import
histamine uptake (GO:0051615)
Namespace: biological_process
Definition: The directed movement of histamine into a cell, typically presynaptic neurons or glial cells. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.
Synonyms: histamine import
regulation of histamine uptake (GO:0051616)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter histamine into a cell.
Synonyms: regulation of histamine import
negative regulation of histamine uptake (GO:0051617)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of histamine into a cell.
Synonyms: down regulation of histamine uptake; down-regulation of histamine uptake; downregulation of histamine uptake; negative regulation of histamine import
positive regulation of histamine uptake (GO:0051618)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of histamine into a cell.
Synonyms: activation of histamine uptake; positive regulation of histamine import; stimulation of histamine uptake; up regulation of histamine uptake; up-regulation of histamine uptake; upregulation of histamine uptake
inhibition of histamine uptake (GO:0051619)
Namespace: biological_process
Definition: Any process that prevents the activation of the directed movement of histamine into a cell.
Synonyms: inhibition of histamine import
norepinephrine uptake (GO:0051620)
Namespace: biological_process
Definition: The directed movement of norepinephrine into a cell, typically presynaptic neurons or glial cells. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.
Synonyms: levarterenol reuptake; levarterenol uptake; noradrenaline reuptake; noradrenaline uptake; norepinephrine import; norepinephrine reuptake
regulation of norepinephrine uptake (GO:0051621)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell.
Synonyms: regulation of levarterenol uptake; regulation of noradrenaline uptake; regulation of norepinephrine import
negative regulation of norepinephrine uptake (GO:0051622)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of norepinephrine into a cell.
Synonyms: down regulation of norepinephrine uptake; down-regulation of norepinephrine uptake; downregulation of norepinephrine uptake; negative regulation of levarterenol uptake; negative regulation of noradrenaline uptake; negative regulation of norepinephrine import
positive regulation of norepinephrine uptake (GO:0051623)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell.
Synonyms: activation of norepinephrine uptake; positive regulation of levarterenol uptake; positive regulation of noradrenaline uptake; positive regulation of norepinephrine import; stimulation of norepinephrine uptake; up regulation of norepinephrine uptake; up-regulation of norepinephrine uptake; upregulation of norepinephrine uptake
inhibition of norepinephrine uptake (GO:0051624)
Namespace: biological_process
Definition: Any process that prevents the activation of the directed movement of norepinephrine into a cell.
Synonyms: inhibition of levarterenol uptake; inhibition of noradrenaline uptake; inhibition of norepinephrine import
epinephrine uptake (GO:0051625)
Namespace: biological_process
Definition: The directed movement of epinephrine into a cell, typically presynaptic neurons or glial cells. Epinephrine is a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.
Synonyms: adrenaline reuptake; adrenaline uptake; epinephrine import; epinephrine reuptake
regulation of epinephrine uptake (GO:0051626)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter epinephrine into a cell.
Synonyms: regulation of adrenaline uptake; regulation of epinephrine import
negative regulation of epinephrine uptake (GO:0051627)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of epinephrine into a cell.
Synonyms: down regulation of epinephrine uptake; down-regulation of epinephrine uptake; downregulation of epinephrine uptake; negative regulation of adrenaline uptake; negative regulation of epinephrine import
positive regulation of epinephrine uptake (GO:0051628)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the directed movement of epinephrine into a cell.
Synonyms: activation of epinephrine uptake; positive regulation of adrenaline uptake; positive regulation of epinephrine import; stimulation of epinephrine uptake; up regulation of epinephrine uptake; up-regulation of epinephrine uptake; upregulation of epinephrine uptake
inhibition of epinephrine uptake (GO:0051629)
Namespace: biological_process
Definition: Any process that prevents the activation of the directed movement of epinephrine into a cell.
Synonyms: inhibition of adrenaline uptake; inhibition of epinephrine import
acetylcholine uptake (GO:0051630)
Namespace: biological_process
Definition: The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.
Synonyms: acetylcholine import