LiteFold/GO huggingface dataset:
obsolete metabolism by symbiont of host xylan (GO:0052177)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete metabolism by symbiont of host cell wall chitin (GO:0052178)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it represents a molecular function.
obsolete metabolism by symbiont of host cell wall pectin (GO:0052179)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of peptidase activity in other organism involved in symbiotic interaction (GO:0052180)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protease activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: down regulation of protease activity in other organism during symbiotic interaction; down-regulation of protease activity in other organism during symbiotic interaction; downregulation of protease activity in other organism during symbiotic interaction; inhibition of protease activity in other organism during symbiotic interaction; negative regulation of protease activity in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents a molecular function.
obsolete modulation by host of symbiont defense response (GO:0052181)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: The reason for obsoletion is that there is no evidence that the host can modulate or regulate a symbiont's defense response.
obsolete modification by host of symbiont morphology or physiology via secreted substance (GO:0052182)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by a substance secreted by one of the organisms. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete disruption of symbiont cellular component (GO:0052183)
Namespace: biological_process
Definition: OBSOLETE. The process in which a host organism destabilizes a cellular component of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: degradation of symbiont cellular component by organism; disassembly by host of symbiont cellular component; disruption by host of symbiont cellular component; disruption by host of symbiont structure; modification by host of symbiont cellular component; modification by host of symbiont structure; perturbation of symbiont cellular component
Comment: This term was obsoleted because there is no evidence that this process exists.
obsolete modulation by organism of symbiont hormone or growth regulator levels (GO:0052184)
Namespace: biological_process
Definition: OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: modulation by organism of symbiont hormone or growth regulator levels
Comment: This term was made obsolete because it does not represent a real biological process.
obsolete modification of structure of other organism involved in symbiotic interaction (GO:0052185)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in an anatomical part or cellular component of a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification of structure of other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modification of cellular component in other organism involved in symbiotic interaction (GO:0052188)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular component in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification of cellular component in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modulation by symbiont of defense-related host cell wall callose deposition (GO:0052189)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction; modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction; modulation by symbiont of defense-related host callose deposition
Comment: This term was obsoleted because it is a host, not a symbiont process, but was formulated as a symbiont process.
obsolete modulation by symbiont of host phagocytosis (GO:0052190)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because there is no evidence that this process exists.
obsolete positive regulation by symbiont of host phagocytosis (GO:0052191)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: activation by symbiont of host phagocytosis; stimulation by symbiont of host phagocytosis; up regulation by symbiont of host phagocytosis; up-regulation by symbiont of host phagocytosis; upregulation by symbiont of host phagocytosis
Comment: This term was obsoleted because there is no evidence that this process exists.
obsolete movement in environment of other organism involved in symbiotic interaction (GO:0052192)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of an organism or motile cell on, within or near a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: locomotion in environment of other organism during symbiotic interaction; movement in environment of other organism during symbiotic interaction
Comment: This term was obsoleted because it represented both a process and a location.
obsolete movement in symbiont environment (GO:0052193)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of an organism or motile cell on, within or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
obsolete movement on or near symbiont (GO:0052194)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
obsolete movement on or near other organism involved in symbiotic interaction (GO:0052195)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of an organism or motile cell on or near a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: movement on or near other organism during symbiotic interaction
Comment: This term was obsoleted because it represented both a process and a location.
obsolete negative regulation by host of symbiont defense response (GO:0052196)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: down regulation by host of symbiont defense response; down-regulation by host of symbiont defense response; downregulation by host of symbiont defense response; inhibition by host of symbiont defense response
Comment: This term was made obsolete because it is not relevant for the host in a host-symbiont interaction.
obsolete positive regulation by host of symbiont defense response (GO:0052197)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms: activation by host of symbiont defense response; stimulation by host of symbiont defense response; up regulation by host of symbiont defense response; up-regulation by host of symbiont defense response; upregulation by host of symbiont defense response
Comment: The reason for obsoletion is that there is no evidence that the host can modulate or regulate a symbiont's defense response.
obsolete modulation of peptidase activity in other organism involved in symbiotic interaction (GO:0052198)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modulation of protease activity in other organism during symbiotic interaction; modulation of protease activity in other organism involved in symbiotic interaction
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (GO:0052199)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: down regulation of enzyme activity in other organism during symbiotic interaction; down-regulation of enzyme activity in other organism during symbiotic interaction; downregulation of enzyme activity in other organism during symbiotic interaction; inhibition of enzyme activity in other organism; inhibition of enzyme activity in other organism during symbiotic interaction; negative regulation of enzyme activity in other organism during symbiotic interaction
Comment: This term was obsoleted because it was an unnecessary grouping term.
symbiont-mediated response to host defenses (GO:0052200)
Namespace: biological_process
Definition: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: maintenance of symbiont tolerance to host defense molecules; response of symbiont to host defense molecules; response to host defense molecules; response to host defenses
Comment: Note that this term is used to annotate gene products of the symbiont.
obsolete response to symbiont defenses (GO:0052201)
Namespace: biological_process
Definition: OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Comment: This term was obsoleted because it is covered by immune response ; GO:0006955 and children.
obsolete negative regulation by symbiont of defense-related host cell wall callose deposition (GO:0052202)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: down regulation by symbiont of defense-related host cell wall callose deposition; down-regulation by symbiont of defense-related host cell wall callose deposition; downregulation by symbiont of defense-related host cell wall callose deposition; inhibition by symbiont of defense-related host cell wall callose deposition; negative regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction; negative regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction; negative regulation by symbiont of defense-related host callose deposition
Comment: This term was obsoleted because it is a host, not a symbiont process, but was formulated as a symbiont process.
obsolete modulation of catalytic activity in other organism involved in symbiotic interaction (GO:0052203)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modulation of enzyme activity within other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete negative regulation of molecular function in other organism involved in symbiotic interaction (GO:0052204)
Namespace: biological_process
Definition: OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of proteins in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: down regulation of protein function in other organism during symbiotic interaction; down-regulation of protein function in other organism during symbiotic interaction; downregulation of protein function in other organism during symbiotic interaction; inhibition of protein function in other organism; inhibition of protein function in other organism during symbiotic interaction; negative regulation of protein function in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modulation of molecular function in other organism involved in symbiotic interaction (GO:0052205)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the function of proteins in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification of molecular function in other organism during symbiotic interaction; modification of protein function in other organism during symbiotic interaction; modulation of molecular function in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents an unnecessary grouping class.
obsolete modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction (GO:0052206)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type II secretion system in the first organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification of morphology or physiology of other organism via protein secreted by type II secretion system during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete modification of morphology or physiology of other organism via protein secreted by type III secretion system involved in symbiotic interaction (GO:0052207)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type III secretion system in the first organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification of morphology or physiology of other organism via protein secreted by type III secretion system during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (GO:0052208)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.
Synonyms: modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete interaction with other organism via substance secreted by type IV secretion system involved in symbiotic interaction (GO:0052209)
Namespace: biological_process
Definition: OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type IV secretion system, where the two organisms are in a symbiotic interaction.
Synonyms: interaction with other organism via substance secreted by type IV secretion system during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete interaction with other organism via protein secreted by type III secretion system involved in symbiotic interaction (GO:0052210)
Namespace: biological_process
Definition: OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type III secretion system, where the two organisms are in a symbiotic interaction.
Synonyms: interaction with other organism via protein secreted by type III secretion system during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete interaction with other organism via protein secreted by type II secretion system involved in symbiotic interaction (GO:0052211)
Namespace: biological_process
Definition: OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type II secretion system, where the two organisms are in a symbiotic interaction.
Synonyms: interaction with other organism via protein secreted by type II secretion system during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction (GO:0052212)
Namespace: biological_process
Definition: OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by one of the organisms, where the two organisms are in a symbiotic interaction.
Synonyms: modification of host morphology or physiology via effector molecule; modification of host morphology or physiology via ellicitor; modification of morphology or physiology of other organism via secreted substance during symbiotic interaction
Comment: This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.
obsolete metabolism of substance in other organism involved in symbiotic interaction (GO:0052214)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: metabolism of substance in other organism during symbiotic interaction
Comment: This term was obsoleted because it represents a molecular function.
obsolete energy taxis in environment of other organism involved in symbiotic interaction (GO:0052215)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of a motile cell or organism in the environment of a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.
Synonyms: energy taxis in environment of other organism during symbiotic interaction; energy taxis in response to environment of other organism
Comment: This term was obsoleted because it represents both a process and a location.
obsolete chemotaxis in environment of other organism involved in symbiotic interaction (GO:0052216)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: chemotaxis in environment of other organism during symbiotic interaction; chemotaxis in response to environment of other organism
Comment: This term was obsoleted because it represents both a process and a location.
obsolete aerotaxis in environment of other organism involved in symbiotic interaction (GO:0052217)
Namespace: biological_process
Definition: OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.
Synonyms: aerotaxis in environment of other organism during symbiotic interaction; aerotaxis in response to environment of other organism
Comment: This term was obsoleted because it represents both a process and a location.