LiteFold/GO huggingface dataset:
limb spinous cell differentiation (GO:0060890)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal spinous cell.
limb granular cell differentiation (GO:0060891)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal granular cell.
limb basal epidermal cell fate specification (GO:0060892)
Namespace: biological_process
Definition: The process in which a cell becomes capable of differentiating autonomously into an limb basal epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
limb granular cell fate specification (GO:0060893)
Namespace: biological_process
Definition: The process in which a cell becomes capable of differentiating autonomously into an limb granular cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
limb spinous cell fate specification (GO:0060894)
Namespace: biological_process
Definition: The process in which a cell becomes capable of differentiating autonomously into a limb spinous cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
obsolete retinoic acid receptor signaling pathway involved in spinal cord dorsal/ventral patterning (GO:0060895)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the dorsal ventral patterning of the spinal cord.
Synonyms: retinoic acid receptor signalling pathway involved in spinal cord dorsal/ventral patterning
Comment: This term was obsoleted because it is a pre-composed term that represents a GO-CAM model.
neural plate pattern specification (GO:0060896)
Namespace: biological_process
Definition: The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.
neural plate regionalization (GO:0060897)
Namespace: biological_process
Definition: The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.
eye field cell fate commitment involved in camera-type eye formation (GO:0060898)
Namespace: biological_process
Definition: The commitment of neurectodermal cells to cells of the eye field and their capacity to differentiate into eye field cells. Eye field cells are neurectodermal cells that will form the optic placode.
obsolete regulation of transcription involved in eye field cell fate commitment of camera-type eye (GO:0060899)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neurectodermal cell to a specialized neurectodermal cell that will give rise to the optic vesicle.
Comment: This term was obsoleted because it represents a GO-CAM model.
embryonic camera-type eye formation (GO:0060900)
Namespace: biological_process
Definition: The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape.
obsolete regulation of hair cycle by canonical Wnt signaling pathway (GO:0060901)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate, frequency or extent of the hair cycle.
Synonyms: regulation of hair cycle by canonical Wnt receptor signaling pathway; regulation of hair cycle by canonical Wnt receptor signalling pathway; regulation of hair cycle by canonical Wnt-activated signaling pathway; regulation of hair cycle by Wnt receptor signaling pathway through beta-catenin
Comment: This term was obsoleted because it represents a GO-CAM model.
regulation of protein folding in endoplasmic reticulum (GO:0060904)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency or extent of the protein folding process that takes place in the endoplasmic reticulum (ER). Secreted, plasma membrane and organelle proteins are folded in the ER, assisted by chaperones and foldases (protein disulphide isomerases), and additional factors required for optimal folding (ATP, Ca2+ and an oxidizing environment to allow disulfide bond formation).
regulation of induction of conjugation upon nitrogen starvation (GO:0060905)
Namespace: biological_process
Definition: Any process that modulates the frequency of induction of conjugation upon nitrogen starvation, the process in which a cell initiates conjugation with cellular fusion upon nitrogen starvation.
negative regulation of regulatory ncRNA-mediated heterochromatin formation (GO:0060906)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of non-coding RNA-mediated heterochromatin formation.
Synonyms: negative regulation of chromatin silencing by small RNA; negative regulation of heterochromatin assembly by small RNA; negative regulation of ncRNA-mediated heterochromatin formation; negative regulation of RNAi-mediated heterochromatin assembly; negative regulation of small non-coding RNA-mediated heterochromatin formation
positive regulation of macrophage cytokine production (GO:0060907)
Namespace: biological_process
Definition: Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.
plasmid copy number maintenance (GO:0060908)
Namespace: biological_process
Definition: The maintenance of the number of copies of extrachromosomal plasmid DNA.
obsolete regulation of DNA replication initiation involved in plasmid copy number maintenance (GO:0060909)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete negative regulation of DNA replication initiation involved in plasmid copy number maintenance (GO:0060910)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreases the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
cardiac cell fate commitment (GO:0060911)
Namespace: biological_process
Definition: The commitment of cells to specific cardiac cell fates and their capacity to differentiate into cardiac cells. Cardiac cells are cells that comprise the organ which pumps blood through the circulatory system.
Synonyms: cardiocyte cell fate commitment
cardiac cell fate specification (GO:0060912)
Namespace: biological_process
Definition: The process involved in the specification of cardiac cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.
Synonyms: cardiocyte cell fate specification
cardiac cell fate determination (GO:0060913)
Namespace: biological_process
Definition: The process involved in cardiac cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.
Synonyms: cardiocyte cell fate determination
heart formation (GO:0060914)
Namespace: biological_process
Definition: The developmental process pertaining to the initial formation of the heart from unspecified parts. This process begins with the specific processes that contribute to the appearance of the heart field and the arrival of cardiac neural crest to the heart region. The process ends when the structural rudiment is recognizable.
Synonyms: cardiogenesis
mesenchymal cell differentiation involved in lung development (GO:0060915)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.
mesenchymal cell proliferation involved in lung development (GO:0060916)
Namespace: biological_process
Definition: The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population that contributes to the progression of the lung over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.
auxin transport (GO:0060918)
Namespace: biological_process
Definition: The directed movement of auxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Auxins are a group of plant hormones that regulates aspects of plant growth.
cardiac pacemaker cell differentiation (GO:0060920)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a pacemaker cell. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.
Synonyms: pacemaker cell differentiation
sinoatrial node cell differentiation (GO:0060921)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a sinoatrial (SA) node cell. SA node cells are pacemaker cells that are found in the sinoatrial node.
Synonyms: SA node cell differentiation; SAN cell differentiation; sinus node cell differentiation
atrioventricular node cell differentiation (GO:0060922)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of an atrioventricular (AV) node cell. AV node cells are pacemaker cells that are found in the atrioventricular node.
Synonyms: AV node cell differentiation
cardiac muscle cell fate commitment (GO:0060923)
Namespace: biological_process
Definition: The commitment of cells to specific cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
Synonyms: cardiomyocyte cell fate commitment; heart muscle cell fate commitment
atrial cardiac muscle cell fate commitment (GO:0060924)
Namespace: biological_process
Definition: The commitment of cells to atrial cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the atrium. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
Synonyms: atrial cardiomyocyte cell fate commitment; atrial heart muscle cell fate commitment
ventricular cardiac muscle cell fate commitment (GO:0060925)
Namespace: biological_process
Definition: The commitment of cells to ventricular cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the ventricle. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
Synonyms: ventricular cardiomyocyte cell fate commitment; ventricular heart muscle cell fate commitment
cardiac pacemaker cell development (GO:0060926)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.
Synonyms: pacemaker cell development
atrioventricular node cell development (GO:0060928)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of an atrioventricular (AV) node cell over time, from its formation to the mature state.
Synonyms: AV node cell development
sinoatrial node cell fate commitment (GO:0060930)
Namespace: biological_process
Definition: The commitment of cells to sinoatrial (SA) node cell fates and their capacity to differentiate into SA node cells. SA node cells are pacemaker cells that are found in the sinoatrial node.
Synonyms: SA node cell commitment; SAN cell commitment; sinus node cell commitment
sinoatrial node cell development (GO:0060931)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a sinoatrial (SA) node cell over time, from its formation to the mature state. SA node cells are pacemaker cells that are found in the sinoatrial node.
Synonyms: SA node cell development; SAN cell development; sinus node cell development
His-Purkinje system cell differentiation (GO:0060932)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles.
His-Purkinje system cell development (GO:0060933)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.
His-Purkinje system cell fate commitment (GO:0060934)
Namespace: biological_process
Definition: The commitment of cells to His-Purkinje cell fates and their capacity to differentiate into His-Purkinje cells. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.
cardiac fibroblast cell differentiation (GO:0060935)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
cardiac fibroblast cell fate commitment (GO:0060937)
Namespace: biological_process
Definition: The commitment of cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
epicardium-derived cardiac fibroblast cell differentiation (GO:0060938)
Namespace: biological_process
Definition: The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
epicardium-derived cardiac fibroblast cell development (GO:0060939)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of an epicardial-derived cardiac fibroblast over time, from its formation to the mature state. A epicardial-derived cardiac fibroblast is a connective tissue cell of the heart that arises from the epicardium and secretes an extracellular matrix rich in collagen and other macromolecules.
epithelial to mesenchymal transition involved in cardiac fibroblast development (GO:0060940)
Namespace: biological_process
Definition: A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will mature into a cardiac fibroblast.
epicardium-derived cardiac fibroblast cell fate commitment (GO:0060941)
Namespace: biological_process
Definition: The commitment of an epicardial cell to a cardiac fibroblast cell fate and its capacity to differentiate into a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
neural crest-derived cardiac fibroblast cell differentiation (GO:0060942)
Namespace: biological_process
Definition: The process in which a neural crest cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
neural crest-derived cardiac fibroblast cell fate commitment (GO:0060944)
Namespace: biological_process
Definition: The commitment of neural crest cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
cardiac neuron differentiation (GO:0060945)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart.
Synonyms: heart neuron differentiation
cardiac blood vessel endothelial cell differentiation (GO:0060946)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels.
cardiac vascular smooth muscle cell differentiation (GO:0060947)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.
Synonyms: heart vascular smooth muscle cell differentiation
cardiac vascular smooth muscle cell development (GO:0060948)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a cardiac vascular smooth muscle cell over time, from its formation to the mature state.
Synonyms: heart vascular smooth muscle cell development
cardiac vascular smooth muscle cell fate commitment (GO:0060949)
Namespace: biological_process
Definition: The commitment of cells to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.
Synonyms: heart vascular smooth muscle cell fate commitment
cardiac glial cell differentiation (GO:0060950)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart.
neural crest-derived cardiac glial cell differentiation (GO:0060951)
Namespace: biological_process
Definition: The process in which a neural crest cell acquires the specialized features of a glial cell of the heart.
cardiac glial cell development (GO:0060952)
Namespace: biological_process
Definition: The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell.
cardiac glial cell fate commitment (GO:0060953)
Namespace: biological_process
Definition: The commitment of cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.
neural crest-derived cardiac glial cell development (GO:0060954)
Namespace: biological_process
Definition: The process aimed at the progression of a neural crest-derived cardiac glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.
neural crest-derived cardiac glial cell fate commitment (GO:0060955)
Namespace: biological_process
Definition: The commitment of neural crest cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.
endocardial cell differentiation (GO:0060956)
Namespace: biological_process
Definition: The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers.
endocardial cell fate commitment (GO:0060957)
Namespace: biological_process
Definition: The commitment of a cell to an endocardial cell fate and its capacity to differentiate into an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.
endocardial cell development (GO:0060958)
Namespace: biological_process
Definition: The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.
cardiac neuron development (GO:0060959)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a cardiac neuron over time, from its formation to the mature state.
Synonyms: heart neuron development
cardiac neuron fate commitment (GO:0060960)
Namespace: biological_process
Definition: The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron of the heart.
Synonyms: heart neuron fate commitment
phospholipase D inhibitor activity (GO:0060961)
Namespace: molecular_function
Definition: Binds to and stops, prevents or reduces the activity of phospholipase D.
regulation of ribosomal protein gene transcription by RNA polymerase II (GO:0060962)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.
Synonyms: regulation of ribosomal protein gene transcription from RNA polymerase II promoter
positive regulation of ribosomal protein gene transcription by RNA polymerase II (GO:0060963)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.
Synonyms: positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter
regulation of miRNA-mediated gene silencing (GO:0060964)
Namespace: biological_process
Definition: A process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs).
Synonyms: regulation of gene silencing by microRNA; regulation of gene silencing by miRNA
negative regulation of miRNA-mediated gene silencing (GO:0060965)
Namespace: biological_process
Definition: A process that decreases the rate, frequency, or extent of gene silencing by a microRNA (miRNA).
Synonyms: negative regulation of gene silencing by microRNA; negative regulation of gene silencing by miRNA
regulation of gene silencing by regulatory ncRNA (GO:0060966)
Namespace: biological_process
Definition: Any process that regulates the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.
Synonyms: regulation of gene silencing by RNA
negative regulation of gene silencing by regulatory ncRNA (GO:0060967)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.
Synonyms: negative regulation of gene silencing by ncRNA; negative regulation of gene silencing by RNA