LiteFold/GO huggingface dataset:
chloramphenicol transmembrane transport (GO:0042892)
Namespace: biological_process
Definition: The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, across a lipid bilayer, from one side of a membrane to the other.
Synonyms: chloramphenicol transport
polymyxin transport (GO:0042893)
Namespace: biological_process
Definition: The directed movement of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
fosmidomycin transport (GO:0042894)
Namespace: biological_process
Definition: The directed movement of fosmidomycin, a phosphonic acid derivative with potent activity against Gram-negative organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
obsolete antibiotic transmembrane transporter activity (GO:0042895)
Namespace: molecular_function
Definition: OBSOLETE. Enables the transfer of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, from one side of a membrane to the other.
Synonyms: antibiotic transporter activity
Comment: The reason for obsoletion is that this term has been inconsistently used. Consider annotating to 'GO:0042910 ; xenobiotic transmembrane transporter activity' and the specific solute being transported as an annotation extension.
chloramphenicol transmembrane transporter activity (GO:0042896)
Namespace: molecular_function
Definition: Enables the transfer of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, from one side of a membrane to the other.
Synonyms: chloramphenicol transporter activity
polymyxin transmembrane transporter activity (GO:0042897)
Namespace: molecular_function
Definition: Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.
Synonyms: polymyxin transporter activity
fosmidomycin transmembrane transporter activity (GO:0042898)
Namespace: molecular_function
Definition: Enables the transfer of fosmidomycin, a phosphonic acid derivative with potent activity against Gram-negative organisms, from one side of a membrane to the other.
Synonyms: fosmidomycin transporter activity
arabinan transmembrane transport (GO:0042899)
Namespace: biological_process
Definition: The process in which arabinan is transported across a lipid bilayer, from one side of a membrane to the other.
Synonyms: arabinan transport
arabinose transmembrane transporter activity (GO:0042900)
Namespace: molecular_function
Definition: Enables the transfer of arabinose, a pentose monosaccharide that occurs in both D and L configurations, and as a polymer, from one side of a membrane to the other.
arabinan transmembrane transporter activity (GO:0042901)
Namespace: molecular_function
Definition: Enables the transfer of an arabinan, a polysaccharide composed of arabinose residues, from one side of a membrane to the other.
tubulin deacetylase activity (GO:0042903)
Namespace: molecular_function
Definition: Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.
9-cis-retinoic acid biosynthetic process (GO:0042904)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 9-cis-retinoic acid, a metabolically active vitamin A derivative.
Synonyms: 9-cis-retinoic acid anabolism; 9-cis-retinoic acid biosynthesis; 9-cis-retinoic acid formation; 9-cis-retinoic acid synthesis
9-cis-retinoic acid metabolic process (GO:0042905)
Namespace: biological_process
Definition: The chemical reactions and pathways involving 9-cis-retinoic acid, a metabolically active vitamin A derivative.
Synonyms: 9-cis-retinoic acid metabolism
xanthine transport (GO:0042906)
Namespace: biological_process
Definition: The directed movement of xanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.
Synonyms: xanthine transmembrane transport
xanthine transmembrane transporter activity (GO:0042907)
Namespace: molecular_function
Definition: Enables the transfer of xanthine from one side of a membrane to the other. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.
xenobiotic transport (GO:0042908)
Namespace: biological_process
Definition: The directed movement of a xenobiotic into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.
Synonyms: drug transport
obsolete acridine transport (GO:0042909)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Comment: This term is out of scope for GO.
xenobiotic transmembrane transporter activity (GO:0042910)
Namespace: molecular_function
Definition: Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.
Synonyms: drug transmembrane transporter activity; drug transporter activity; multidrug efflux pump activity; multidrug transporter activity; multidrug, alkane resistant pump activity; xenobiotic transporter activity
obsolete acridine transmembrane transporter activity (GO:0042911)
Namespace: molecular_function
Definition: OBSOLETE. Enables the directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene from one side of a membrane to the other.
Synonyms: acridine transporter activity
Comment: The reason for obsoletion is that these terms are beyond the scope of GO.
colicin transmembrane transporter activity (GO:0042912)
Namespace: molecular_function
Definition: Enables the transfer of a colicin from one side of a membrane to the other. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.
group A colicin transmembrane transporter activity (GO:0042913)
Namespace: molecular_function
Definition: Enables the transfer of group A colicins (colicins E1, E2, E3, A, K, and N) from one side of a membrane to the other.
colicin transport (GO:0042914)
Namespace: biological_process
Definition: The directed movement of a colicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.
group A colicin transport (GO:0042915)
Namespace: biological_process
Definition: The directed movement of group A colicins (colicins E1, E2, E3, A, K, and N) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
alkanesulfonate transmembrane transport (GO:0042918)
Namespace: biological_process
Definition: The directed movement of an alkanesulfonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanesulfonates are organic esters or salts of sulfonic acid containing an aliphatic hydrocarbon radical.
Synonyms: alkanesulfonate transport; alkanesulphonate transport
benzoate transport (GO:0042919)
Namespace: biological_process
Definition: The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
3-hydroxyphenylpropionic acid transmembrane transport (GO:0042920)
Namespace: biological_process
Definition: The directed movement of 3-hydroxyphenylpropionic acid across a lipid bilayer, from one side of a membrane to the other.
Synonyms: 3-(3-hydroxyphenyl)propionic acid transport; 3-hydroxyphenylpropionic acid transport; m-hydroxyphenylpropionic acid transport
nuclear receptor-mediated glucocorticoid signaling pathway (GO:0042921)
Namespace: biological_process
Definition: A nuclear receptor-mediated signaling pathway initiated by a glucocorticoid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.
Synonyms: glucocorticoid receptor signaling pathway; glucocorticoid receptor signalling pathway; intracellular glucocorticoid receptor signaling pathway
neuromedin U receptor binding (GO:0042922)
Namespace: molecular_function
Definition: Binding to one or more specific sites on a neuromedin U receptor.
neuropeptide binding (GO:0042923)
Namespace: molecular_function
Definition: Interacting selectively and non-covalently and stoichiometrically with neuropeptides, peptides with direct synaptic effects (peptide neurotransmitters) or indirect modulatory effects on the nervous system (peptide neuromodulators).
neuromedin U binding (GO:0042924)
Namespace: molecular_function
Definition: Interacting selectively and non-covalently and stoichiometrically with neuromedin U, a hypothalamic peptide involved in energy homeostasis and stress responses.
Synonyms: NMU binding
benzoate transmembrane transporter activity (GO:0042925)
Namespace: molecular_function
Definition: Enables the directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) from one side of a membrane to the other.
Synonyms: benzoate transporter activity
3-hydroxyphenylpropionic acid transmembrane transporter activity (GO:0042926)
Namespace: molecular_function
Definition: Enables the directed movement of 3-hydroxyphenylpropionic acid from one side of a membrane to the other.
Synonyms: 3-(3-hydroxyphenyl)propionic acid transporter activity; 3-hydroxyphenylpropionic acid transporter activity; m-hydroxyphenylpropionic acid transporter activity
ferrichrome import into cell (GO:0042928)
Namespace: biological_process
Definition: A process in which ferrichrome is transported into the cell by specific cell surface receptors. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.
Synonyms: ferrichrome transport
ferrichrome transmembrane transporter activity (GO:0042929)
Namespace: molecular_function
Definition: Enables the directed movement of a ferrichrome from one side of a membrane to the other. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.
Synonyms: ferrichrome transporter activity
enterobactin transport (GO:0042930)
Namespace: biological_process
Definition: The directed movement of the siderochrome enterobactin, a cyclic trimer of 2, 3 dihydroxybenzoylserine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: enterochelin transport
enterobactin transmembrane transporter activity (GO:0042931)
Namespace: molecular_function
Definition: Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.
Synonyms: enterobactin transporter activity; enterochelin transporter activity
chrysobactin transport (GO:0042932)
Namespace: biological_process
Definition: The directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
chrysobactin transmembrane transporter activity (GO:0042933)
Namespace: molecular_function
Definition: Enables the directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) from one side of a membrane to the other.
Synonyms: chrysobactin transporter activity
achromobactin transmembrane transporter activity (GO:0042934)
Namespace: molecular_function
Definition: Enables the transfer of achromobactin, a citrate siderophore, from one side of a membrane to the other.
Synonyms: achromobactin transporter activity
tripeptide transmembrane transporter activity (GO:0042937)
Namespace: molecular_function
Definition: Enables the transfer of a tripeptide, a compound containing three amino acids linked together by peptide bonds, from one side of a membrane to the other.
Synonyms: tripeptide transporter activity
dipeptide transport (GO:0042938)
Namespace: biological_process
Definition: The directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
D-amino acid transport (GO:0042940)
Namespace: biological_process
Definition: The directed movement of the D-enantiomer of an amino acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
D-alanine transmembrane transport (GO:0042941)
Namespace: biological_process
Definition: The process in which D-alanine, the D-enantiomer of 2-aminopropanoic acid,  is transported across a lipid bilayer, from one side of a membrane to the other by means of some agent such as a transporter or pore.
D-serine transmembrane transport (GO:0042942)
Namespace: biological_process
Definition: The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.
D-amino acid transmembrane transporter activity (GO:0042943)
Namespace: molecular_function
Definition: Enables the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the D-enantiomers of amino acids.
Synonyms: D-amino acid transporter activity
D-alanine transmembrane transporter activity (GO:0042944)
Namespace: molecular_function
Definition: Enables the transfer of D-alanine from one side of a membrane to the other. D-alanine is the D-enantiomer of 2-aminopropanoic acid.
Synonyms: D-alanine transporter activity
D-serine transmembrane transporter activity (GO:0042945)
Namespace: molecular_function
Definition: Enables the transfer of D-serine from one side of a membrane to the other. D-serine is the D-enantiomer of 2-amino-3-hydroxypropanoic acid.
Synonyms: D-serine permease activity; D-serine transporter activity
glucoside transport (GO:0042946)
Namespace: biological_process
Definition: The directed movement of glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucosides are glycosides in which the sugar group is a glucose residue.
glucoside transmembrane transporter activity (GO:0042947)
Namespace: molecular_function
Definition: Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.
salicin transport (GO:0042948)
Namespace: biological_process
Definition: The directed movement of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
arbutin transport (GO:0042949)
Namespace: biological_process
Definition: The directed movement of arbutin, a glycoside found in the bearberry and related plants which has been used to treat urinary-tract diseases, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
salicin transmembrane transporter activity (GO:0042950)
Namespace: molecular_function
Definition: Enables the transfer of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, from one side of a membrane to the other.
beta-ketoadipate pathway (GO:0042952)
Namespace: biological_process
Definition: A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.
Synonyms: ortho-cleavage pathway
lipoprotein transport (GO:0042953)
Namespace: biological_process
Definition: The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
obsolete lipoprotein transporter activity (GO:0042954)
Namespace: molecular_function
Definition: OBSOLETE. Enables the directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells.
Comment: The reason for obsoletion is this term has been incorrectly used.
dextrin transmembrane transporter activity (GO:0042957)
Namespace: molecular_function
Definition: Enables the transfer of dextrin, any one, or the mixture, of the intermediate polysaccharides formed during the hydrolysis of starch, which are dextrorotatory, soluble in water, and precipitable in alcohol, from one side of a membrane to the other.
maltodextrin transmembrane transporter activity (GO:0042958)
Namespace: molecular_function
Definition: Enables the transfer of maltodextrin, any polysaccharide of glucose residues in beta-(1,4) linkage, from one side of a membrane to the other.
ABC-type alkanesulfonate transporter transporter activity (GO:0042959)
Namespace: molecular_function
Definition: Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).
Synonyms: alkanesulfonate transmembrane transporter activity; alkanesulfonate transporter activity; alkanesulphonate transporter activity
antimonite secondary active transmembrane transporter activity (GO:0042960)
Namespace: molecular_function
Definition: Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.
Synonyms: antimonite porter activity
ATPase-coupled antimonite transmembrane transporter activity (GO:0042961)
Namespace: molecular_function
Definition: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + antimonite(in) = ADP + phosphate + antimonite(out).
Synonyms: antimonite-transporting ATPase activity; ATP-dependent antimonite transporter activity
obsolete thioredoxin reduction (GO:0042964)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the reduction of thioredoxin, a small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase.
Synonyms: thioredoxin anabolism; thioredoxin biosynthesis; thioredoxin formation; thioredoxin synthesis
Comment: This term was obsoleted because it represents a molecular function.
obsolete glutaredoxin biosynthetic process (GO:0042965)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the formation of a small disulfide-containing redox protein that serves as a glutathione-disulfide oxidoreductase.
Synonyms: glutaredoxin anabolism; glutaredoxin biosynthesis; glutaredoxin formation; glutaredoxin synthesis
Comment: This term was made obsolete because it refers to the biosynthesis of a protein.
biotin carboxyl carrier protein biosynthetic process (GO:0042966)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of the biotin carboxyl carrier protein, a subunit of acetyl-coenzyme A carboxylase.
Synonyms: BCCP biosynthesis; BCCP biosynthetic process; biotin carboxyl carrier protein anabolism; biotin carboxyl carrier protein biosynthesis; biotin carboxyl carrier protein formation; biotin carboxyl carrier protein synthesis
obsolete acyl-carrier-protein biosynthetic process (GO:0042967)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways resulting in the formation of acyl-carrier protein.
Synonyms: ACP biosynthesis; ACP biosynthetic process; acyl carrier protein biosynthesis; acyl carrier protein biosynthetic process; acyl-carrier protein biosynthesis; acyl-carrier-protein anabolism; acyl-carrier-protein biosynthesis; acyl-carrier-protein formation; acyl-carrier-protein synthesis
Comment: The reason for obsoletion is that acyl-carrier-protein is synthesized by the ribosome like any other protein.
L-homoserine transmembrane transport (GO:0042968)
Namespace: biological_process
Definition: The directed movement of homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms: homoserine transport
obsolete lactone transport (GO:0042969)
Namespace: biological_process
Definition: OBSOLETE. The directed movement of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.
Comment: This term aws obsoleted because there is no evidence for a specific pathway to transport lactone.
L-homoserine transmembrane transporter activity (GO:0042970)
Namespace: molecular_function
Definition: Enables the transfer of homoserine from one side of a membrane to the other. Homoserine is alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.
Synonyms: homoserine transmembrane transporter activity; homoserine transporter activity
obsolete lactone transmembrane transporter activity (GO:0042971)
Namespace: molecular_function
Definition: OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.
Comment: This term was obsoleted because there is no evidence for a specific lactone transporter.
licheninase activity (GO:0042972)
Namespace: molecular_function
Definition: Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in beta-D-glucans containing (1->3) and (1->4) bonds.
Synonyms: 1,3-1,4-beta-D-glucan 4-glucanohydrolase activity; 1,3-1,4-beta-glucan 4-glucanohydrolase activity; 1,3;1,4-beta-glucan 4-glucanohydrolase activity; 1,3;1,4-beta-glucan endohydrolase activity; beta-(1->3), (1->4)-D-glucan 4-glucanohydrolase activity; beta-glucanase activity; endo-beta-1,3-1,4 glucanase activity; lichenase activity; mixed linkage beta-glucanase activity