LiteFold/GO huggingface dataset:
mRNA localization resulting in post-transcriptional regulation of gene expression (GO:0010609)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of gene expression after the production of a mRNA transcript by its transport into, or maintenance in, a specific location within the cell.
Synonyms: mRNA localisation resulting in posttranscriptional regulation of gene expression; mRNA localization resulting in posttranscriptional regulation of gene expression; posttranscriptional regulation of gene expression by mRNA localisation; posttranscriptional regulation of gene expression by mRNA localization
regulation of mRNA stability involved in response to stress (GO:0010610)
Namespace: biological_process
Definition: Any process that modulates the propensity of mRNA molecules to degradation that is part of a change in state or activity of a cell as a result of an exogenous disturbance.
regulation of cardiac muscle hypertrophy (GO:0010611)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.
regulation of cardiac muscle adaptation (GO:0010612)
Namespace: biological_process
Definition: Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.
positive regulation of cardiac muscle hypertrophy (GO:0010613)
Namespace: biological_process
Definition: Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.
negative regulation of cardiac muscle hypertrophy (GO:0010614)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.
positive regulation of cardiac muscle adaptation (GO:0010615)
Namespace: biological_process
Definition: Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.
negative regulation of cardiac muscle adaptation (GO:0010616)
Namespace: biological_process
Definition: Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.
circadian regulation of calcium ion oscillation (GO:0010617)
Namespace: biological_process
Definition: Any process that modulates the concentration of cytosolic free calcium ion [Ca2+]cyt with a regularity of approximately 24 hours.
Synonyms: circadian regulation of [Ca2+]cyt oscillation; circadian regulation of Ca2+ oscillation; circadian regulation of cytosolic calcium ion homeostasis; circadian regulation of cytosolic free calcium ion oscillation
aerenchyma formation (GO:0010618)
Namespace: biological_process
Definition: The process that gives rise to aerenchyma, parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. This process pertains to the initial formation of a structure from unspecified parts.
adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway (GO:0010619)
Namespace: biological_process
Definition: An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by glucose binding to its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.
Synonyms: activation of adenylate cyclase activity by glucose involved in G-protein signaling; activation of adenylate cyclase activity by glucose-triggered G-protein signaling pathway; activation of adenylate cyclase activity by glucose-triggered G-protein signalling pathway; glucose-sensing PKA pathway
negative regulation of transcription by transcription factor catabolism (GO:0010620)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the catabolism of a sequence-specific DNA-binding transcription factor by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
obsolete negative regulation of transcription by transcription factor localization (GO:0010621)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.
Synonyms: negative regulation of transcription by transcription factor localisation
Comment: This term is a mix of a MF (sequestering activity) and a BP (negative regulation of transcription or a child).
programmed cell death involved in cell development (GO:0010623)
Namespace: biological_process
Definition: The activation of endogenous cellular processes that result in the death of a cell as part of its development.
Synonyms: developmental programmed cell death; programmed cell death involved in development
Comment: This process is part of the natural developmental program of some cell types, but it does not always happen as part of the development or shaping of a gross anatomical structure.
regulation of Schwann cell proliferation (GO:0010624)
Namespace: biological_process
Definition: Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.
positive regulation of Schwann cell proliferation (GO:0010625)
Namespace: biological_process
Definition: Any process that increases the frequency or rate of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.
negative regulation of Schwann cell proliferation (GO:0010626)
Namespace: biological_process
Definition: Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.
positive regulation of gene expression (GO:0010628)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).
negative regulation of gene expression (GO:0010629)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).
Synonyms: gene silencing
Comment: This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.
regulation of transcription, start site selection (GO:0010630)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA by a mechanism that selects the start site along that template.
epithelial cell migration (GO:0010631)
Namespace: biological_process
Definition: The orderly movement of an epithelial cell from one site to another, often during the development of a multicellular organism.
negative regulation of epithelial cell migration (GO:0010633)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell migration.
positive regulation of epithelial cell migration (GO:0010634)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of epithelial cell migration.
regulation of mitochondrial fusion (GO:0010635)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.
positive regulation of mitochondrial fusion (GO:0010636)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.
negative regulation of mitochondrial fusion (GO:0010637)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.
positive regulation of organelle organization (GO:0010638)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.
Synonyms: positive regulation of organelle organisation; positive regulation of organelle organization and biogenesis
negative regulation of organelle organization (GO:0010639)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.
Synonyms: negative regulation of organelle organisation; negative regulation of organelle organization and biogenesis
positive regulation of platelet-derived growth factor receptor signaling pathway (GO:0010641)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.
Synonyms: positive regulation of platelet-derived growth factor receptor signalling pathway
negative regulation of platelet-derived growth factor receptor signaling pathway (GO:0010642)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.
Synonyms: negative regulation of platelet-derived growth factor receptor signalling pathway
cell communication by chemical coupling (GO:0010643)
Namespace: biological_process
Definition: The process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.
cell communication by electrical coupling (GO:0010644)
Namespace: biological_process
Definition: The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.
regulation of cell communication by chemical coupling (GO:0010645)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.
regulation of cell communication (GO:0010646)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
positive regulation of cell communication (GO:0010647)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
negative regulation of cell communication (GO:0010648)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
regulation of cell communication by electrical coupling (GO:0010649)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.
positive regulation of cell communication by electrical coupling (GO:0010650)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.
negative regulation of cell communication by electrical coupling (GO:0010651)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.
positive regulation of cell communication by chemical coupling (GO:0010652)
Namespace: biological_process
Definition: Any process that increases the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.
apical cell fate commitment (GO:0010654)
Namespace: biological_process
Definition: The process in which the developmental fate of a cell becomes restricted such that it will develop into an apical cell. The apical cell is the upper cell formed after the first division of the zygote.
negative regulation of muscle cell apoptotic process (GO:0010656)
Namespace: biological_process
Definition: Any process that decreases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.
Synonyms: negative regulation of muscle cell apoptosis
striated muscle cell apoptotic process (GO:0010658)
Namespace: biological_process
Definition: A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations.
Synonyms: striated muscle cell apoptosis
regulation of muscle cell apoptotic process (GO:0010660)
Namespace: biological_process
Definition: Any process that modulates the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.
Synonyms: regulation of muscle cell apoptosis
positive regulation of muscle cell apoptotic process (GO:0010661)
Namespace: biological_process
Definition: Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.
Synonyms: positive regulation of muscle cell apoptosis
regulation of striated muscle cell apoptotic process (GO:0010662)
Namespace: biological_process
Definition: Any process that modulates the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.
Synonyms: regulation of striated muscle cell apoptosis
positive regulation of striated muscle cell apoptotic process (GO:0010663)
Namespace: biological_process
Definition: Any process that increases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.
Synonyms: positive regulation of striated muscle cell apoptosis
negative regulation of striated muscle cell apoptotic process (GO:0010664)
Namespace: biological_process
Definition: Any process that decreases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.
Synonyms: down regulation of striated muscle cell apoptosis; down-regulation of striated muscle cell apoptosis; downregulation of striated muscle cell apoptosis; inhibition of striated muscle cell apoptosis; negative regulation of striated muscle cell apoptosis
regulation of cardiac muscle cell apoptotic process (GO:0010665)
Namespace: biological_process
Definition: Any process that modulates the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.
Synonyms: regulation of cardiac muscle cell apoptosis
positive regulation of cardiac muscle cell apoptotic process (GO:0010666)
Namespace: biological_process
Definition: Any process that increases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.
Synonyms: positive regulation of cardiac muscle cell apoptosis
negative regulation of cardiac muscle cell apoptotic process (GO:0010667)
Namespace: biological_process
Definition: Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.
Synonyms: down regulation of cardiac muscle cell apoptosis; down-regulation of cardiac muscle cell apoptosis; downregulation of cardiac muscle cell apoptosis; inhibition of cardiac muscle cell apoptosis; negative regulation of cardiac muscle cell apoptosis
ectodermal cell differentiation (GO:0010668)
Namespace: biological_process
Definition: The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an ectodermal cell. Differentiation includes the processes involved in commitment of a cell to a specific fate.
epithelial structure maintenance (GO:0010669)
Namespace: biological_process
Definition: A tissue homeostatic process required for the maintenance of epithelial structure.
obsolete positive regulation of oxygen and reactive oxygen species metabolic process (GO:0010670)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).
Synonyms: positive regulation of oxygen and reactive oxygen species metabolic process
Comment: This term was made obsolete because, as part of the GO/ChEBI alignment effort, curators determined that oxygen and reactive oxygen species should not be grouped together.
obsolete regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (GO:0010672)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.
Synonyms: regulation of meiosis by regulation of transcription from RNA polymerase II promoter; regulation of transcription from RNA polymerase II promoter, meiotic
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (GO:0010673)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.
Synonyms: activation of meiosis by positive regulation of transcription from RNA polymerase II promoter; positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter; positive regulation of transcription from RNA polymerase II promoter, meiotic; stimulation of meiosis by positive regulation of transcription from RNA polymerase II promoter; up regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter; up-regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter; upregulation of meiosis by positive regulation of transcription from RNA polymerase II promoter
Comment: This term was obsoleted because it represents a GO-CAM model.
obsolete regulation of cellular carbohydrate metabolic process (GO:0010675)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.
Comment: This term was obsoleted because it is not different from its parent, regulation of carbohydrate metabolic process ; GO:0006109.
obsolete positive regulation of cellular carbohydrate metabolic process (GO:0010676)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.
Comment: This term was obsoleted because it is not different from its parent, positive regulation of carbohydrate metabolic process ; GO:0045913.