LiteFold/GO huggingface dataset:
regulation of cell diameter (GO:0060305)
Namespace: biological_process
Definition: Any process that modulates the diameter of a cell, the length of a line segment that crosses through the center of a circular section through a cell.
Synonyms: regulation of cell width
negative regulation of type II interferon-mediated signaling pathway (GO:0060336)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.
Synonyms: negative regulation of gamma-interferon-mediated signaling pathway; negative regulation of immune interferon-mediated signaling pathway; negative regulation of interferon-gamma-mediated signaling pathway; negative regulation of interferon-gamma-mediated signalling pathway; negative regulation of type II IFN-mediated signaling pathway
negative regulation of type I interferon-mediated signaling pathway (GO:0060339)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of a type I interferon-mediated signaling pathway.
Synonyms: negative regulation of type I interferon-mediated signalling pathway
spleen trabecula formation (GO:0060345)
Namespace: biological_process
Definition: The process of creating a trabecula in the spleen. A trabecula is a tissue element in the form of a small beam, strut or rod.
Synonyms: spleen trabecula biogenesis; spleen trabeculation
regulation of atrial cardiac muscle cell membrane depolarization (GO:0060371)
Namespace: biological_process
Definition: Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in an atrial cardiomyocyte.
Synonyms: atrial depolarization; electrocardiogram PR interval; regulation of atrial cardiac muscle cell depolarization; regulation of atrial cardiomyocyte membrane depolarization
obsolete positive regulation of single-stranded telomeric DNA binding (GO:0060381)
Namespace: biological_process
Definition: OBSOLETE. Any process that increases the frequency, rate or extent of single-stranded telomeric DNA binding.
Synonyms: positive regulation of telomeric ssDNA binding
Comment: This term was obsoleted because it represents a molecular function.
positive regulation of SMAD protein signal transduction (GO:0060391)
Namespace: biological_process
Definition: Any process that increases the rate, frequency or extent of SMAD protein signal transduction.
Synonyms: positive regulation of SMAD protein import into nucleus; positive regulation of SMAD protein nuclear translocation
obsolete negative regulation of acetylcholine metabolic process (GO:0060410)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.
Comment: This term was obsoleted because it is an unnecessary grouping class.
lung lobe development (GO:0060462)
Namespace: biological_process
Definition: The biological process whose specific outcome is the progression of a lung lobe from an initial condition to its mature state. This process begins with the formation of a lung lobe by branching morphogenesis and ends with the mature structure. A lung lobe is one of the rounded projections that compose the lung.
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis (GO:0060489)
Namespace: biological_process
Definition: The process in which a lung bud bifurcates parallel to the plane of the previous bud.
positive regulation of epithelial cell proliferation involved in lung morphogenesis (GO:0060501)
Namespace: biological_process
Definition: Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape.
obsolete activation of prostate induction by androgen receptor signaling pathway (GO:0060520)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.
Synonyms: activation of prostate induction by androgen receptor signalling pathway
Comment: This term was obsoleted because it represents a GO-CAM model.
cartilage morphogenesis (GO:0060536)
Namespace: biological_process
Definition: The process in which the anatomical structures of cartilage are generated and organized.
regulation of necroptotic process (GO:0060544)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.
Synonyms: regulation of necroptosis
positive regulation of necroptotic process (GO:0060545)
Namespace: biological_process
Definition: Any process that increases the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.
Synonyms: positive regulation of necroptosis
superior vena cava morphogenesis (GO:0060578)
Namespace: biological_process
Definition: The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart.
negative regulation of lipoprotein lipid oxidation (GO:0060588)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.
mammary gland specification (GO:0060594)
Namespace: biological_process
Definition: The regionalization process in which the mammary line is specified. The mammary line is a ridge of epidermal cells that will form the mammary placodes.
Synonyms: mammary line specification
obsolete mesenchymal cell differentiation involved in mammary gland development (GO:0060610)
Namespace: biological_process
Definition: OBSOLETE. The process in which a relatively unspecialized cell acquires specialized features of a mammary gland mesenchymal cell. Mammary gland mesenchymal cells form a loosely connected network of cells that surround the mammary ducts.
Synonyms: mammary gland mesenchymal cell differentiation
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
positive regulation of mammary placode formation by mesenchymal-epithelial signaling (GO:0060617)
Namespace: biological_process
Definition: Any process that initiates the formation of a mammary placode through a mechanism that mediates the transfer of information from a mesenchymal cell to an epithelial cell resulting in the epithelial cell adopting the identity of a cell of the mammary placode.
Synonyms: positive regulation of mammary placode formation by mesenchymal-epithelial signalling
negative regulation of cholesterol import (GO:0060621)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of cholesterol import. Cholesterol import is the directed movement of cholesterol into a cell or organelle.
regulation of ascospore wall beta-glucan biosynthetic process (GO:0060622)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency or extent of ascospore wall beta-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.
regulation of chromosome condensation (GO:0060623)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.
regulation of meiosis I (GO:0060631)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.
negative regulation of (1->3)-beta-D-glucan biosynthetic process (GO:0060636)
Namespace: biological_process
Definition: Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.
Synonyms: negative regulation of 1,3-beta-D-glucan biosynthetic process
obsolete epithelial cell differentiation involved in mammary gland bud morphogenesis (GO:0060643)
Namespace: biological_process
Definition: OBSOLETE. The process in which a cell of the mammary placode becomes a cell of the mammary gland bud.
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling (GO:0060665)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of branching involved in salivary gland morphogenesis as a result of signals being generated by the mesenchyme and received and interpreted by the salivary gland epithelium.
Synonyms: regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signalling
dichotomous subdivision of terminal units involved in salivary gland branching (GO:0060666)
Namespace: biological_process
Definition: The process in which a salivary epithelial cord bifurcates at its end.
branch elongation involved in salivary gland morphogenesis (GO:0060667)
Namespace: biological_process
Definition: The differential growth of the salivary branches along their axis, resulting in the growth of a branch.
epithelial cell differentiation involved in embryonic placenta development (GO:0060671)
Namespace: biological_process
Definition: The process in which a trophoblast cell acquires specialized features of an epithelial cell of the placental labyrinthine layer.
obsolete cell-cell signaling involved in placenta development (GO:0060673)
Namespace: biological_process
Definition: OBSOLETE. Any process that mediates the transfer of information from one cell to another.
Synonyms: cell-cell signalling involved in placenta development
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
placenta blood vessel development (GO:0060674)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a blood vessel of the placenta over time, from its formation to the mature structure.
branch elongation involved in ureteric bud branching (GO:0060681)
Namespace: biological_process
Definition: The growth of a branch of the ureteric bud along its axis.
regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling (GO:0060683)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the epithelial cells to the mesenchymal cells of the salivary gland.
Synonyms: regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signalling
regulation of branching involved in prostate gland morphogenesis (GO:0060687)
Namespace: biological_process
Definition: Any process that modulates the rate, frequency, or extent of prostate gland branching, the process in which the branching structure of the prostate gland is generated and organized. A branch is a division or offshoot from a main stem.
obsolete regulation of cholesterol transporter activity (GO:0060694)
Namespace: biological_process
Definition: OBSOLETE. Any process that modulates the rate, frequency, or extent of cholesterol transporter activity.
Comment: This term was obsoleted because it represents a molecular function.
obsolete negative regulation of ribonuclease activity (GO:0060701)
Namespace: biological_process
Definition: OBSOLETE. Any process that decreases the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.
Comment: This term was obsoleted because it represents a molecular function.
chorion development (GO:0060717)
Namespace: biological_process
Definition: The biological process whose specific outcome is the progression of a chorion from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The chorion is an extraembryonic membrane.
epithelial-mesenchymal signaling involved in prostate gland development (GO:0060738)
Namespace: biological_process
Definition: Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted and contributes to the progression of the prostate gland over time.
Synonyms: epithelial-mesenchymal signalling involved in prostate gland development
adult foraging behavior (GO:0060757)
Namespace: biological_process
Definition: Behavior by which an adult locates food.
obsolete planar cell polarity pathway involved in gastrula mediolateral intercalation (GO:0060775)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) contributing to the interdigitation of cells along the mediolateral axis during gastrulation.
Comment: The reason for obsoletion is that this term should be captured using GO-CAM or extensions.
regulation of cell differentiation involved in tissue homeostasis (GO:0060786)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of cell differentiation that contributes to the maintenance of a steady state of a cell type within a tissue.
cell fate commitment involved in formation of primary germ layer (GO:0060795)
Namespace: biological_process
Definition: The commitment of cells to specific cell fates of the endoderm, ectoderm, or mesoderm as a part of gastrulation.
obsolete transforming growth factor beta receptor signaling pathway involved in endodermal cell fate specification (GO:0060799)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the commitment of an unspecified fate to adopt an endoderm fate.
Synonyms: transforming growth factor beta receptor signalling pathway involved in endodermal cell fate specification
Comment: This term was obsoleted because it represents a GO-CAM model.
epiblast cell-extraembryonic ectoderm cell signaling (GO:0060802)
Namespace: biological_process
Definition: Any process that mediates the transfer of information from an epiblast cell to an extraembryonic ectoderm cell.
venous endothelial cell migration involved in lymph vessel development (GO:0060855)
Namespace: biological_process
Definition: The orderly movement of venous endothelial cells out of the veins giving rise to the precursors of lymphatic endothelial cells.
negative regulation of floral organ abscission (GO:0060862)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.
anterior semicircular canal development (GO:0060873)
Namespace: biological_process
Definition: The progession of the anterior semicircular canal from its initial formation to the mature structure.
obsolete regulation of hair cycle by BMP signaling pathway (GO:0060902)
Namespace: biological_process
Definition: OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that modulates the rate, frequency or extent of the hair cycle.
Synonyms: regulation of hair cycle by BMP signalling pathway
Comment: This term was obsoleted because it represents a GO-CAM model.
positive regulation of meiosis I (GO:0060903)
Namespace: biological_process
Definition: Any process that increases the rate, frequency, or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.
regulation of (1->6)-beta-D-glucan biosynthetic process (GO:0060917)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.
Synonyms: regulation of 1,6-beta-glucan biosynthetic process
auxin import into cell (GO:0060919)
Namespace: biological_process
Definition: The directed movement of auxins from outside of a cell into a cell.
Synonyms: auxin influx
cardiac pacemaker cell fate commitment (GO:0060927)
Namespace: biological_process
Definition: The commitment of cells to pacemaker cell fates and their capacity to differentiate into pacemaker cells. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.
Synonyms: pacemaker cell fate commitment
atrioventricular node cell fate commitment (GO:0060929)
Namespace: biological_process
Definition: The commitment of cells to atrioventricular (AV) node cell fates and their capacity to differentiate into AV node cells.
Synonyms: AV node cell fate commitment
cardiac fibroblast cell development (GO:0060936)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
neural crest-derived cardiac fibroblast cell development (GO:0060943)
Namespace: biological_process
Definition: The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation from a neural crest cell to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.
embryonic heart tube dorsal/ventral pattern formation (GO:0060970)
Namespace: biological_process
Definition: The regionalization process in which the areas along the dorsal/ventral axis of the embryonic heart tube are established. This process will determine the patterns of cell differentiation along the axis.
negative regulation of dendritic spine development (GO:0061000)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.
positive regulation of mRNA catabolic process (GO:0061014)
Namespace: biological_process
Definition: Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
Synonyms: positive regulation of mRNA decay
snRNA import into nucleus (GO:0061015)
Namespace: biological_process
Definition: The directed movement of snRNA, small nuclear ribonucleic acid into the nucleus.
endodermal digestive tract morphogenesis (GO:0061031)
Namespace: biological_process
Definition: The process in which the anatomical structures of the endodermal digestive tract are generated and organized. The endodermal digestive tract includes those portions of the digestive tract that are derived from endoderm.
olfactory bulb mitral cell layer development (GO:0061034)
Namespace: biological_process
Definition: The progression of the olfactory bulb mitral cell layer over time from its initial formation until its mature state. The mitral cell layer is composed of pyramidal neurons whose cell bodies are located between the granule cell layer and the plexiform layer.
urethra development (GO:0061068)
Namespace: biological_process
Definition: The progression of the urethra over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body.
urethra epithelium development (GO:0061071)
Namespace: biological_process
Definition: The progression of the urethra epithelium over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body. The epithelium is the tubular, planar layer of cells through which the urine passes.
obsolete chaperone-mediated protein folding (GO:0061077)
Namespace: biological_process
Definition: OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
Comment: This term represent a GO-CAM model
negative regulation of protein refolding (GO:0061084)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.
negative regulation of turning behavior involved in mating (GO:0061096)
Namespace: biological_process
Definition: Any process that decreases the rate, frequency or extent of turning behavior involved in mating. Turning behavior is the sharp ventral turn performed by the male as he approaches either the hermaphrodite head or tail, whilst trying to locate his partner's vulva. Turning occurs via a sharp ventral coil of the male's tail.
obsolete epithelial-mesenchymal cell signaling involved in lung development (GO:0061111)
Namespace: biological_process
Definition: OBSOLETE. Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ.
Synonyms: epithelial-mesenchymal cell signalling involved in lung development
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
pancreatic bud formation (GO:0061130)
Namespace: biological_process
Definition: The morphogenetic process in which the foregut region specified to become the pancreas forms a bud.
pancreas induction (GO:0061132)
Namespace: biological_process
Definition: The close range interaction of two or more cells or tissues that causes the cells of the gut to change their fates and specify the development of the pancreas.
morphogenesis of a branching epithelium (GO:0061138)
Namespace: biological_process
Definition: The process in which the anatomical structures of a branched epithelium are generated and organized.