LiteFold/GO huggingface dataset:
[glycogen-synthase-D] phosphatase activity (GO:0050407)
Namespace: molecular_function
Definition: Catalysis of the reaction: [glycogen-synthase D] + H2O = [glycogen-synthase I] + phosphate.
Synonyms: glycogen glucosyltransferase phosphatase activity; glycogen synthase D phosphatase activity; glycogen synthase phosphatase activity; glycogen synthetase phosphatase activity; glycogen-synthase-D phosphatase activity; Mg2+ dependent glycogen synthase phosphatase activity; phosphatase type 2oC; UDP-glucose:glycogen 4-alpha-D-glucosyltransferase-D phosphohydrolase activity; UDP-glycogen glucosyltransferase phosphatase activity; UDPglucose-glycogen glucosyltransferase phosphatase activity; UDPglucose:glycogen 4-alpha-D-glucosyltransferase-D phosphohydrolase activity; uridine diphosphoglucose-glycogen glucosyltransferase phosphatase activity
3-oxolaurate decarboxylase activity (GO:0050410)
Namespace: molecular_function
Definition: Catalysis of the reaction: 3-oxododecanoate + H+ = 2-undecanone + CO2. Also decarboxylates other C14 to C16 oxo acids.
Synonyms: 3-oxododecanoate carboxy-lyase (2-undecanone-forming); 3-oxododecanoate carboxy-lyase activity; beta-ketoacyl decarboxylase activity; beta-ketolaurate decarboxylase activity
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process (GO:0050428)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.
Synonyms: 3'-phosphoadenosine 5'-phosphosulfate anabolism; 3'-phosphoadenosine 5'-phosphosulfate biosynthesis; 3'-phosphoadenosine 5'-phosphosulfate formation; 3'-phosphoadenosine 5'-phosphosulfate synthesis; 3'-phosphoadenosine 5'-phosphosulphate biosynthesis; 3'-phosphoadenosine 5'-phosphosulphate biosynthetic process; 3'-phosphoadenylyl-sulfate biosynthesis; 3'-phosphoadenylyl-sulfate biosynthetic process; adenosine 3'-phosphate 5'-phosphosulfate biosynthesis; adenosine 3'-phosphate 5'-phosphosulfate biosynthetic process; PAPS biosynthesis; PAPS biosynthetic process; phosphoadenosine phosphosulfate biosynthesis; phosphoadenosine phosphosulfate biosynthetic process
microfibril binding (GO:0050436)
Namespace: molecular_function
Definition: Binding to a microfibril, any small fibril occurring in biological material.
Comment: See also the cellular component term 'microfibril ; GO:0001527'.
N-acetylneuraminate synthase activity (GO:0050462)
Namespace: molecular_function
Definition: Catalysis of the reaction: phosphoenolpyruvate + N-acetyl-D-mannosamine + H2O = phosphate + N-acetylneuraminate.
Synonyms: (NANA)condensing enzyme activity; N-acetylneuraminate pyruvate-lyase (pyruvate-phosphorylating) activity; N-acetylneuraminic acid synthase activity; NeuAc synthase activity; phosphoenolpyruvate:N-acetyl-D-mannosamine C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming)
nitrate reductase [NAD(P)H] activity (GO:0050463)
Namespace: molecular_function
Definition: Catalysis of the reaction: nitrite + NAD(P)+ + H2O = nitrate + NAD(P)H + H+.
Synonyms: assimilatory NAD(P)H-nitrate reductase activity; assimilatory nitrate reductase activity; NAD(P)H bispecific nitrate reductase activity; NAD(P)H-nitrate reductase activity; NAD(P)H2:nitrate oxidoreductase activity; NAD(P)H:nitrate oxidoreductase activity; nitrate reductase (reduced nicotinamide adenine dinucleotide (phosphate)) activity; nitrate reductase [NAD(P)H2]; nitrate reductase NAD(P)H activity; nitrite:NAD(P)+ oxidoreductase activity
mannosyl-3-phosphoglycerate synthase activity (GO:0050504)
Namespace: molecular_function
Definition: Catalysis of the reaction: 3-phospho-D-glycerate + GDP-alpha-D-mannose = 2-(alpha-D-mannosyl)-3-phosphoglycerate + GDP + H+.
Synonyms: GDP-mannose:3-phosphoglycerate 3-alpha-D-mannosyltransferase activity; MPG synthase activity
vomilenine glucosyltransferase activity (GO:0050506)
Namespace: molecular_function
Definition: Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.
Synonyms: UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity; UDPG:vomilenine 21-beta-D-glucosyltransferase activity; UDPG:vomilenine 21beta-D-glucosyltransferase activity; vomilenine-glucosyltransferase activity
obsolete oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors (GO:0050523)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD or NADP.
Synonyms: oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors
Comment: This term was made obsolete because it was an unnecessary grouping term.
(4S)-limonene synthase activity (GO:0050552)
Namespace: molecular_function
Definition: Catalysis of the reaction: geranyl diphosphate = (4S)-limonene + diphosphate.
Synonyms: (-)-(4S)-limonene synthase activity; 4S-(-)-limonene synthase activity; geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-(4S)-limonene-forming]; geranyldiphosphate diphosphate lyase (limonene forming); geranyldiphosphate diphosphate lyase [cyclizing, (4S)-limonene-forming]
obsolete lysine-tRNA(Pyl) ligase activity (GO:0050562)
Namespace: molecular_function
Definition: OBSOLETE. Catalysis of the reaction: tRNA(Pyl) + L-lysine + ATP = L-lysyl-tRNA(Pyl) + diphosphate + AMP.
Synonyms: L-lysine:tRNAPyl ligase (AMP-forming); lysine-tRNAPyl ligase activity
Comment: This term was obsoleted because there is no evidence that this activity exists.
4-hydroxythreonine-4-phosphate dehydrogenase activity (GO:0050570)
Namespace: molecular_function
Definition: Catalysis of the reaction: 4-(phosphooxy)-L-threonine + NAD+ = 3-amino-2-oxopropyl phosphate + CO2 + NADH.
Synonyms: L-threonine 4-phosphate dehydrogenase activity; NAD(+)-dependent threonine 4-phosphate dehydrogenase activity; NAD+-dependent threonine 4-phosphate dehydrogenase activity
(2R)-2-hydroxyacid dehydrogenase (NADP+) activity (GO:0050578)
Namespace: molecular_function
Definition: Catalysis of the reaction: a (2R)-2-hydroxycarboxylate + NADP+ = a 2-oxocarboxylate + NADPH + H+.
Synonyms: (R)-2-hydroxyacid:NAD(P)+ oxidoreductase activity; (R)-sulfolactate:NAD(P)(+) oxidoreductase activity; (R)-sulfolactate:NAD(P)+ oxidoreductase activity; L-sulfolactate dehydrogenase activity
D-mannitol oxidase activity (GO:0050581)
Namespace: molecular_function
Definition: Catalysis of the reaction: mannitol + O2 = mannose + H2O2.
Synonyms: D-arabinitol oxidase activity; D-arabitol oxidase activity; mannitol oxidase activity; mannitol:oxygen oxidoreductase (cyclizing)
linoleate 11-lipoxygenase activity (GO:0050584)
Namespace: molecular_function
Definition: Catalysis of the reaction: linoleate + O2 = (9Z,11S,12Z)-11-hydroperoxyoctadeca-9,12-dienoate.
Synonyms: linoleate dioxygenase activity; linoleate:oxygen 11S-oxidoreductase activity; manganese lipoxygenase activity
chlorite O2-lyase activity (GO:0050587)
Namespace: molecular_function
Definition: Catalysis of the reaction: chloride + O2 = chlorite.
Synonyms: chloride:oxygen oxidoreductase activity; chlorite dismutase activity
methylarsonate reductase activity (GO:0050610)
Namespace: molecular_function
Definition: Catalysis of the reaction: 2 glutathione + H+ + methylarsonate = glutathione disulfide + H2O + methylarsonous acid.
Synonyms: glutathione:methylarsonate oxidoreductase activity; MMA(V) reductase activity
tryptophan alpha,beta-oxidase activity (GO:0050621)
Namespace: molecular_function
Definition: Catalysis of the reaction: L-tryptophan + O2 = alpha,beta-didehydrotryptophan + H2O2 + H+.
Synonyms: L-tryptophan 2',3'-oxidase activity; L-tryptophan alpha,beta-dehydrogenase activity; L-tryptophan:oxygen alpha,beta-oxidoreductase activity; tryptophan a,b-oxidase activity
Comment: Note that this was EC:1.4.3.17.
2-hydroxy-1,4-benzoquinone reductase (NADH) activity (GO:0050625)
Namespace: molecular_function
Definition: Catalysis of the reaction: 2-hydroxy-1,4-benzoquinone + 2 H+ + NADH = benzene-1,2,4-triol + NAD+.
Synonyms: 1,2,4-trihydroxybenzene:NAD oxidoreductase activity; 1,2,4-trihydroxybenzene:NAD+ oxidoreductase activity; 2-hydroxy-1,4-benzoquinone reductase activity; 2-hydroxy-1,4-benzoquinone:NADH oxidoreductase activity; hydroxybenzoquinone reductase activity; NADH:2-hydroxy-1,4-benzoquinone oxidoreductase activity
2-oxopropyl-CoM reductase (carboxylating) activity (GO:0050628)
Namespace: molecular_function
Definition: Catalysis of the reaction: acetoacetate + coenzyme M + NADP+ = 2-oxopropyl-coenzyme M + CO2 + NADPH.
Synonyms: 2-KPCC activity; 2-mercaptoethanesulfonate,acetoacetate:NADP+ oxidoreductase (decarboxylating); NADPH:2-(2-ketopropylthio)ethanesulfonate oxidoreductase/carboxylase activity; NADPH:2-ketopropyl-coenzyme M oxidoreductase/carboxylase activity
vinorine synthase activity (GO:0050636)
Namespace: molecular_function
Definition: Catalysis of the reaction: 16-epivellosimine + acetyl-CoA = CoA + vinorine.
Synonyms: acyl-CoA:16-epivellosimine O-acetyltransferase (cyclizing)
5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding (GO:0050647)
Namespace: molecular_function
Definition: Binding to 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.
Synonyms: 5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding
3'-phosphoadenosine 5'-phosphosulfate binding (GO:0050656)
Namespace: molecular_function
Definition: Binding to 3'-phosphoadenosine 5'-phosphosulfate (PAPS), a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.
Synonyms: 3'-phosphoadenosine 5'-phosphosulphate binding; 3'-phosphoadenylyl-sulfate binding; adenosine 3'-phosphate 5'-phosphosulfate binding; PAPS binding; phosphoadenosine phosphosulfate binding
negative regulation of defense response to virus by host (GO:0050689)
Namespace: biological_process
Definition: Any host process that results in the inhibition of antiviral immune response mechanisms, thereby facilitating viral replication. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms: down regulation of antiviral response by host; down-regulation of antiviral response by host; downregulation of antiviral response by host; inhibition of antiviral response by host; negative regulation by host of antiviral response; negative regulation of antiviral response by host
LBD domain binding (GO:0050693)
Namespace: molecular_function
Definition: Binding to a protein's ligand binding domain (LBD) domain, found in nuclear receptors. In general, the LBDs consist of three layers comprised of twelve alpha-helices and several beta-strands that are organized around a lipophilic ligand-binding pocket.
Synonyms: ligand binding domain binding
positive regulation of inflammatory response (GO:0050729)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of the inflammatory response.
Synonyms: activation of inflammatory response; stimulation of inflammatory response; up regulation of inflammatory response; up-regulation of inflammatory response; upregulation of inflammatory response
hydroxycinnamoyltransferase activity (GO:0050734)
Namespace: molecular_function
Definition: Catalysis of the transfer of a hydroxycinnamoyl group to an acceptor molecule.
obsolete protein-FMN linkage via S-(4a-FMN)-L-cysteine (GO:0050742)
Namespace: biological_process
Definition: OBSOLETE. The formation of a protein-FMN linkage via S-(4a-FMN)-L-cysteine.
Comment: This is a molecular function.
obsolete peptide cross-linking via L-cysteinyl-5-imidazolinone glycine (GO:0050745)
Namespace: biological_process
Definition: OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, a cysteine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.
Comment: This term was obsoleted because it represents a molecular function; however the enzyme responsible for this reaction has not been defined.
obsolete negative regulation of thymidylate synthase biosynthetic process (GO:0050760)
Namespace: biological_process
Definition: OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.
Synonyms: down regulation of thymidylate synthase biosynthetic process; down-regulation of thymidylate synthase biosynthetic process; downregulation of thymidylate synthase biosynthetic process; inhibition of thymidylate synthase biosynthetic process; negative regulation of thymidylate synthase anabolism; negative regulation of thymidylate synthase biosynthesis; negative regulation of thymidylate synthase formation; negative regulation of thymidylate synthase synthesis
Comment: This term was obsoleted because it represent a specific gene product. Consider annotating to 'negative regulation of gene expression', 'negative regulation of transcription' or some signaling term.
negative regulation of neurogenesis (GO:0050768)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.
Synonyms: down regulation of neurogenesis; down-regulation of neurogenesis; downregulation of neurogenesis; inhibition of neurogenesis
dopamine receptor binding (GO:0050780)
Namespace: molecular_function
Definition: Binding to a dopamine receptor.
obsolete cocaine metabolic process (GO:0050783)
Namespace: biological_process
Definition: OBSOLETE. The chemical reactions and pathways involving cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic.
Synonyms: cocaine metabolism
Comment: This term was obsoleted because it is an unnecessary grouping term.
regulation of biological process (GO:0050789)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
Synonyms: regulation of physiological process
regulation of cellular process (GO:0050794)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
Synonyms: regulation of cellular physiological process
regulation of behavior (GO:0050795)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.
Synonyms: regulation of behaviour
thymidylate synthase (FAD) activity (GO:0050797)
Namespace: molecular_function
Definition: Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP + NADPH + H+ = dTMP + tetrahydrofolate + NADP+.
Synonyms: 5,10-methylenetetrahydrofolate,FADH2:dUMP C-methyltransferase activity; FDTS activity; flavin dependent thymidylate synthase activity; Thy1 activity; ThyX activity
positive regulation of coagulation (GO:0050820)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of coagulation.
Synonyms: activation of coagulation; positive regulation of clotting; stimulation of coagulation; up regulation of coagulation; up-regulation of coagulation; upregulation of coagulation
peptide antigen stabilization (GO:0050823)
Namespace: biological_process
Definition: Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.
Synonyms: peptide antigen stabilization activity
obsolete peptidyl-5-hydroxy-L-lysine trimethylation (GO:0050838)
Namespace: biological_process
Definition: OBSOLETE. The methylation of 5-hydroxy-L-lysine to form peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine.
Comment: This term was obsoleted because it represents a molecular function.
obsolete copper incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide (GO:0050842)
Namespace: biological_process
Definition: OBSOLETE. The incorporation of copper into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.
Comment: This term was obsoleted because it represents a molecular function.
teichuronic acid biosynthetic process (GO:0050845)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the formation of teichuronic acid, a polymer containing chains of uronic acids and N-acetylglucosamine found in the cell wall, membrane or capsule of Gram-positive bacteria.
Synonyms: teichuronic acid anabolism; teichuronic acid biosynthesis; teichuronic acid formation; teichuronic acid synthesis
negative regulation of T cell activation (GO:0050868)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of T cell activation.
Synonyms: down regulation of T cell activation; down-regulation of T cell activation; downregulation of T cell activation; inhibition of T cell activation; negative regulation of T lymphocyte activation; negative regulation of T-cell activation; negative regulation of T-lymphocyte activation
regulation of body fluid levels (GO:0050878)
Namespace: biological_process
Definition: Any process that modulates the levels of body fluids.
multicellular organismal movement (GO:0050879)
Namespace: biological_process
Definition: Any physiological process involved in changing the position of a multicellular organism or an anatomical part of a multicellular organism.
voluntary musculoskeletal movement (GO:0050882)
Namespace: biological_process
Definition: The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will.
endocrine process (GO:0050886)
Namespace: biological_process
Definition: The process that involves the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.
Synonyms: endocrine physiological process; endocrine physiology
determination of sensory modality (GO:0050887)
Namespace: biological_process
Definition: The determination of the type or quality of a sensation. Sensory modalities include touch, thermal sensation, visual sensation, auditory sensation and pain.
nitrile catabolic process (GO:0050899)
Namespace: biological_process
Definition: The chemical reactions and pathways resulting in the breakdown of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.
Synonyms: nitrile breakdown; nitrile catabolism; nitrile degradation
positive chemotaxis (GO:0050918)
Namespace: biological_process
Definition: The directed movement of a motile cell or organism towards a higher concentration of a chemical.
Synonyms: chemoattraction
negative regulation of negative chemotaxis (GO:0050925)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.
Synonyms: down regulation of negative chemotaxis; down-regulation of negative chemotaxis; downregulation of negative chemotaxis; inhibition of negative chemotaxis
regulation of late stripe melanocyte differentiation (GO:0050940)
Namespace: biological_process
Definition: Any process that modulates the frequency, rate or extent of late stripe melanocyte differentiation.
Synonyms: regulation of late stripe melanophore differentiation
negative regulation of iridophore differentiation (GO:0050943)
Namespace: biological_process
Definition: Any process that stops, prevents, or reduces the frequency, rate or extent of iridophore differentiation.
Synonyms: down regulation of iridophore differentiation; down-regulation of iridophore differentiation; downregulation of iridophore differentiation; inhibition of iridophore differentiation
positive regulation of iridophore differentiation (GO:0050945)
Namespace: biological_process
Definition: Any process that activates or increases the frequency, rate or extent of iridophore differentiation.
Synonyms: activation of iridophore differentiation; stimulation of iridophore differentiation; up regulation of iridophore differentiation; up-regulation of iridophore differentiation; upregulation of iridophore differentiation
sensory perception of mechanical stimulus (GO:0050954)
Namespace: biological_process
Definition: The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.
Synonyms: chemi-mechanical coupling; mechanosensory perception; perception of mechanical stimulus
obsolete detection of electrical stimulus involved in sensory perception of pain (GO:0050967)
Namespace: biological_process
Definition: OBSOLETE. The series of events that contribute to the perception of pain in which an electrical stimulus is received and converted into a molecular signal.
Synonyms: detection of electrical stimulus during sensory perception of pain; perception of pain, detection of electrical stimulus; perception of pain, sensory detection of electrical stimulus; perception of pain, sensory transduction of electrical stimulus; sensory detection of electrical stimulus during perception of pain; sensory transduction of electrical stimulus during perception of pain
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
obsolete detection of mechanical stimulus involved in magnetoreception (GO:0050971)
Namespace: biological_process
Definition: OBSOLETE. The series of events involved in magnetoception in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of torque on particles such as magnetite which respond to a magnetic field.
Synonyms: magnetoception, sensory transduction of mechanical stimulus; magnetoreception, detection of mechanical stimulus; magnetoreception, sensory detection of mechanical stimulus; magnetoreception, sensory transduction of mechanical stimulus; sensory detection of mechanical stimulus during magnetoreception; sensory transduction of mechanical stimulus during magnetoreception
Comment: This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
sensory perception of touch (GO:0050975)
Namespace: biological_process
Definition: The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach).
Synonyms: perception of touch; tactile sense; taction; tactition
obsolete N-terminal peptidyl-methionine carboxylation (GO:0050988)
Namespace: biological_process
Definition: OBSOLETE. The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.
Comment: This term was obsoleted because it represents a molecular function.