RoCK and ROI: single-cell transcriptomics with multiplexed enrichment of selected transcripts and region-specific sequencing
Year: 2025
Type: article
Language: en
Topic: Single-cell and spatial transcriptomics
Authors and affiliations:
raw_author_name: Giulia Moro
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Izaskun Mallona
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland. izaskun.mallona@gmail.com
SIB Swiss Institute of Bioinformatics, University of Zurich, Zurich, Switzerland. izaskun.mallona@gmail.com
Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Malwine J. Barz
raw_affiliation_strings: Clinical Research Unit "CATCH ALL" (KFO 5010), Kiel, Germany
Medical Department II, Hematology and Oncology, University Hospital Schleswig-Holstein, Kiel, Germany
raw_author_name: Joël Maillard
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Michael David Brügger
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Hassan Fazilaty
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Quentin Szabo
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Tomas Valenta
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
Laboratory of Cell and Developmental Biology, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic
raw_author_name: Kristina Handler
raw_affiliation_strings: Institute of Experimental Immunology, University of Zurich, Zurich, Switzerland
raw_author_name: Fiona Kerlin
raw_affiliation_strings: Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany
Institute of Biology, Department of Biology, Chemistry, Pharmacy, Free University Berlin, Berlin, Germany
raw_author_name: Lorenz Bastian
raw_affiliation_strings: Clinical Research Unit "CATCH ALL" (KFO 5010), Kiel, Germany
Medical Department II, Hematology and Oncology, University Hospital Schleswig-Holstein, Kiel, Germany
raw_author_name: Claudia D. Baldus
raw_affiliation_strings: Clinical Research Unit "CATCH ALL" (KFO 5010), Kiel, Germany
Medical Department II, Hematology and Oncology, University Hospital Schleswig-Holstein, Kiel, Germany
raw_author_name: Andreas E. Moor
raw_affiliation_strings: Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland
raw_author_name: Robert Zinzen
raw_affiliation_strings: Systems Biology Imaging Technology Platform, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine (MDC) in the Helmholtz Association, Berlin, Germany
raw_author_name: Mark D. Robinson
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
SIB Swiss Institute of Bioinformatics, University of Zurich, Zurich, Switzerland
raw_author_name: Erich Brunner
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland. erich.brunner@mls.uzh.ch
Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
raw_author_name: Konrad Basler
raw_affiliation_strings: Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland