LLM4Binary/decompile-bench-makefile huggingface dataset:
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/inter.cpp
// Function: get_asm_cov(ma_ug_t*, unsigned long, mul_ov_t*)
void get_asm_cov(ma_ug_t *ug, uint64_t ul_base, mul_ov_t *aov)
{
	int64_t ss = asm_opt.hg_size;
	if(ss < 0) {
		uint64_t i, k, an;
		int64_t sp;
		asg_t *g = ug->g;
		asg_arc_t *av = NULL;
		for (i = 0, ss = 0; i < g->n_seq; i++) {
			sp = g->seq[i].len; av = asg_arc_a(g, i); an = asg_arc_n(g, i);
			for (k = 0; k < an; k++) {
				if(av[k].del) continue;
				if((av[k].v) < i) {
					sp -= ((int64_t)av[k].ol);
				}
			}
			if(sp > 0) ss += sp;
		}		
	} else {
		ss *= asm_opt.polyploidy;
	}

	if(ss <= 0) ss = 1;
	
	aov->asm_cov = ul_base/ss; aov->asm_size = ss;
	fprintf(stderr, "[M::%s::] ==> asm_cov: %lu, asm_size: %lu\n", __func__, aov->asm_cov, aov->asm_size);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
movq %rdx, -0x8(%rsp)
movq %rsi, %rax
leaq 0x263e86(%rip), %rsi    # 0x28a758
movq 0x200(%rsi), %rdx
testq %rdx, %rdx
jns 0x268f5
movq 0x18(%rdi), %rdx
movl 0x14(%rdx), %esi
andq $0x7fffffff, %rsi       # imm = 0x7FFFFFFF
jne 0x26902
xorl %edx, %edx
jmp 0x26979
movslq 0x1bc(%rsi), %rcx
imulq %rcx, %rdx
jmp 0x26979
movq 0x8(%rdx), %rdi
movq 0x20(%rdx), %r8
movq 0x28(%rdx), %r9
addq $0xc, %rdi
xorl %r10d, %r10d
movl $0xffffffff, %r11d      # imm = 0xFFFFFFFF
xorl %edx, %edx
xorl %ebx, %ebx
movl (%r8,%rbx,8), %r14d
andl $0x7fffffff, %r14d      # imm = 0x7FFFFFFF
movq (%r9,%rbx,8), %r12
movq %r12, %r15
andq %r11, %r15
je 0x26967
shrq $0x20, %r12
imulq $0x18, %r15, %r15
imulq $0x18, %r12, %r12
addq %rdi, %r12
xorl %r13d, %r13d
movslq (%r12,%r13), %rbp
testq %rbp, %rbp
js 0x2695e
movl -0x4(%r12,%r13), %ecx
cmpq %rcx, %rbx
jbe 0x2695e
subq %rbp, %r14
addq $0x18, %r13
cmpq %r13, %r15
jne 0x26948
testq %r14, %r14
cmovleq %r10, %r14
addq %r14, %rdx
incq %rbx
cmpq %rsi, %rbx
jne 0x2691f
cmpq $0x2, %rdx
movabsq $0x1, %r8
cmovgeq %rdx, %r8
xorl %edx, %edx
divq %r8
movq -0x8(%rsp), %rcx
movq %rax, 0x8(%rcx)
movq %r8, (%rcx)
movq 0x26363d(%rip), %rcx    # 0x289fe0
movq (%rcx), %rdi
leaq 0x2118f2(%rip), %rsi    # 0x23829f
leaq 0x211916(%rip), %rdx    # 0x2382ca
movq %rax, %rcx
xorl %eax, %eax
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x22b0
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/inter.cpp
// Function: ul_align(mg_idxopt_t*, ug_opt_t const*, asg_t const*, enzyme const*, void*, ha_pt_s*, ma_ug_t*)
int ul_align(mg_idxopt_t *opt, const ug_opt_t *uopt, const asg_t *rg, const enzyme *fn, void *ha_flt_tab, ha_pt_t *ha_idx, ma_ug_t *ug)
{
    uldat_t sl; memset(&sl, 0, sizeof(sl));
    sl.ha_flt_tab = ha_flt_tab;
    sl.ha_idx = ha_idx;
    sl.opt = opt;   
    sl.chunk_size = 200000000;
    sl.n_thread = asm_opt.thread_num;
    sl.ug = ug;
	sl.rg = rg;
	sl.uopt = uopt;
	if(!load_ul_hits(&sl.hits, &sl.nn, asm_opt.output_file_name)) {
    	alignment_ul_pipeline(&sl, fn);
		write_ul_hits(&sl.hits, &sl.nn, asm_opt.output_file_name);
	}

	mul_ov_t aov; memset(&aov, 0, sizeof(aov));
	get_asm_cov(ug, sl.hits.total_base, &aov);
	fprintf(stderr, "[M::%s::] ==> total_pair: %lu, total_base: %lu, n: %d\n", 
										__func__, sl.hits.total_pair, sl.hits.total_base, (int32_t)sl.hits.n);



	get_ul_g(&aov, &sl.hits, ug, rg, 0.51, 0.1, 500, 1000);

	

	// print_gaf(ug, &(sl.hits), &(sl.nn));
	mg_gres_a_des(&(sl.hits)); free(sl.nn.a); free(sl.nn.cc.a);
    return 1;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x108, %rsp            # imm = 0x108
movq %r9, %r15
movq %r8, %r13
movq %rcx, 0x8(%rsp)
movq %rdx, %rbx
movq %rsi, %rbp
movq %rdi, %r14
leaq 0x20(%rsp), %r12
movl $0xe8, %edx
movq %r12, %rdi
xorl %esi, %esi
callq 0x20e0
movq %r13, (%r12)
movq %r15, 0x8(%r12)
movq %r14, 0x10(%r12)
movq $0xbebc200, 0x50(%r12)  # imm = 0xBEBC200
leaq 0x263a52(%rip), %r14    # 0x28a758
movslq 0x7c(%r14), %rax
movq %rax, 0x58(%r12)
movq 0x140(%rsp), %rax
movq %rax, 0x18(%r12)
movq %rbx, 0x20(%r12)
movq %rbp, 0x28(%r12)
leaq 0x90(%rsp), %r15
leaq 0xb8(%rsp), %r13
movq 0x10(%r14), %rdx
movq %r15, %rdi
movq %r13, %rsi
callq 0x1d8866
testl %eax, %eax
jne 0x26d67
leaq 0x20(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0x1c365c
movq 0x10(%r14), %rdx
movq %r15, %rdi
movq %r13, %rsi
callq 0x266ae
xorps %xmm0, %xmm0
leaq 0x10(%rsp), %r12
movaps %xmm0, (%r12)
movq 0xa8(%rsp), %rsi
movq 0x140(%rsp), %r14
movq %r14, %rdi
movq %r12, %rdx
callq 0x268b9
movq 0x26324a(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
movq 0xb0(%rsp), %rcx
movq 0xa8(%rsp), %r8
movl 0x90(%rsp), %r9d
leaq 0x211658(%rip), %rsi    # 0x238410
leaq 0x211688(%rip), %rdx    # 0x238447
xorl %eax, %eax
callq 0x22b0
movsd 0x1fe77a(%rip), %xmm0   # 0x225548
movsd 0x1fddfa(%rip), %xmm1   # 0x224bd0
movq %r12, %rdi
movq %r15, %rsi
movq %r14, %rdx
movq %rbx, %rcx
movl $0x1f4, %r8d            # imm = 0x1F4
movl $0x3e8, %r9d            # imm = 0x3E8
callq 0x1d8be0
movq %r15, %rdi
callq 0x19927e
movq 0xc8(%rsp), %rdi
callq 0x2220
movq 0xe8(%rsp), %rdi
callq 0x2220
pushq $0x1
popq %rax
addq $0x108, %rsp            # imm = 0x108
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/inter.cpp
// Function: ul_resolve(ma_ug_t*, asg_t const*, ug_opt_t const*, int)
void ul_resolve(ma_ug_t *ug, const asg_t *rg, const ug_opt_t *uopt, int hap_n)
{
	fprintf(stderr, "[M::%s::] ==> UL\n", __func__);
    mg_idxopt_t opt;
    init_mg_opt(&opt, 0, 19, 10, hap_n, 0, 0, 0.05, asm_opt.ul_error_rate_low, asm_opt.ul_error_rate_hpc, asm_opt.ul_ec_round);
	int exist = (asm_opt.load_index_from_disk? uidx_load(&ha_flt_tab, &ha_idx, asm_opt.output_file_name, NULL) : 0);
    if(exist == 0) uidx_build(ug, &opt);
	if(exist == 0) uidx_write(ha_flt_tab, ha_idx, asm_opt.output_file_name, NULL);
    ul_align(&opt, uopt, rg, asm_opt.ar, ha_flt_tab, ha_idx, ug);
    uidx_destory();
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x98, %rsp
movl %ecx, %ebp
movq %rdx, %r14
movq %rsi, %rbx
movq %rdi, %r15
movq 0x263193(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
leaq 0x2115f9(%rip), %rsi    # 0x238450
leaq 0x211604(%rip), %rdx    # 0x238462
xorl %r13d, %r13d
xorl %eax, %eax
callq 0x22b0
movabsq $0x130000000a, %rax     # imm = 0x130000000A
movq %rax, 0x10(%rsp)
movl %ebp, 0x24(%rsp)
andl $0x0, 0x20(%rsp)
movabsq $0x7a12000002710, %rax  # imm = 0x7A12000002710
movq %rax, 0x18(%rsp)
movabsq $0x271000000014, %rax   # imm = 0x271000000014
movq %rax, 0x28(%rsp)
movl $0x3e428f5c, 0x60(%rsp) # imm = 0x3E428F5C
movabsq $0x271000000019, %rax   # imm = 0x271000000019
movq %rax, 0x38(%rsp)
movaps 0x20c984(%rip), %xmm0   # 0x233840
movups %xmm0, 0x40(%rsp)
movabsq $0x3f4ccccd3f000000, %rax # imm = 0x3F4CCCCD3F000000
movq %rax, 0x64(%rsp)
movabsq $0xb00000005, %rax      # imm = 0xB00000005
movq %rax, 0x30(%rsp)
movaps 0x20c96a(%rip), %xmm0   # 0x233850
movups %xmm0, 0x50(%rsp)
andl $0x0, 0x90(%rsp)
leaq 0x26385e(%rip), %r12    # 0x28a758
andq $0x0, 0x70(%rsp)
movups 0x230(%r12), %xmm0
movl 0x240(%r12), %eax
movabsq $0x3fa999999999999a, %rcx # imm = 0x3FA999999999999A
movq %rcx, 0x78(%rsp)
movups %xmm0, 0x80(%rsp)
movl %eax, 0x94(%rsp)
cmpl %r13d, 0xf0(%r12)
je 0x26f57
movq 0x10(%r12), %rdx
leaq 0x2644eb(%rip), %rdi    # 0x28b430
leaq 0x2644ec(%rip), %rsi    # 0x28b438
xorl %ecx, %ecx
callq 0x115c9a
testl %eax, %eax
jne 0x26f84
leaq 0x10(%rsp), %rsi
movq %r15, %rdi
callq 0x24736
leaq 0x2644c5(%rip), %rax    # 0x28b430
movq (%rax), %rdi
leaq 0x2644c3(%rip), %rax    # 0x28b438
movq (%rax), %rsi
movq 0x10(%r12), %rdx
xorl %ecx, %ecx
callq 0x115aed
movq 0x68(%r12), %rcx
leaq 0x2644a0(%rip), %r12    # 0x28b430
movq (%r12), %r8
leaq 0x26449d(%rip), %r13    # 0x28b438
movq (%r13), %r9
movq %r15, (%rsp)
leaq 0x10(%rsp), %rdi
movq %r14, %rsi
movq %rbx, %rdx
callq 0x26caf
movq (%r12), %rdi
callq 0x114a78
movq (%r13), %rdi
callq 0x113930
andq $0x0, (%r12)
andq $0x0, (%r13)
addq $0x98, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/inter.cpp
// Function: gen_UL_reovlps(uldat_t*, ma_ug_t*, asg_t*, char*, int, int)
void gen_UL_reovlps(uldat_t *sl, ma_ug_t *ug, asg_t *sg, char* gfa_name, int32_t cutoff, int32_t is_emask)
{
	ul_idx_t *uu = gen_ul_idx(sl->uopt, ug, sg);
	int exist = (asm_opt.load_index_from_disk? uidx_load(&ha_flt_tab, &ha_idx, gfa_name, ug) : 0);
    if(exist == 0) uidx_l_build(uu->ug, (mg_idxopt_t *)sl->opt, cutoff);
	if(exist == 0) uidx_write(ha_flt_tab, ha_idx, gfa_name, ug);
	sl->ha_flt_tab = ha_flt_tab; sl->ha_idx = (ha_pt_t *)ha_idx; sl->uu = uu;	
	if(is_emask) {
		if((!(asm_opt.load_index_from_disk)) || (!load_emask_t(&(sl->mm), gfa_name, ug))) {
			sl->mm = graph_ovlp_binning(ug, sg, sl->uopt);
			write_emask_t(sl->mm, gfa_name, ug);
		}
	}

	init_ucr_file_t(sl, gfa_name, 1);
	ul_v_recall(sl, asm_opt.ar);
	destory_ucr_file_t(sl);
	///do not free ug
	uu->ug = NULL; destroy_ul_idx_t(uu); ha_ft_destroy(ha_flt_tab); ha_pt_destroy(ha_idx);
	sl->ha_flt_tab = NULL; sl->ha_idx = NULL; sl->uu = NULL;
	destroy_idx_emask_t(sl->mm); free(sl->mm); sl->mm = NULL;
	// exit(1);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movl %r9d, %ebp
movl %r8d, 0x4(%rsp)
movq %rcx, %r15
movq %rdx, %r13
movq %rsi, %r12
movq %rdi, %rbx
movq 0x28(%rdi), %rdi
callq 0x27b3f
movq %rax, %r14
leaq 0x262a51(%rip), %rax    # 0x28a758
cmpl $0x0, 0xf0(%rax)
je 0x27e19
leaq 0x263715(%rip), %rdi    # 0x28b430
leaq 0x263716(%rip), %rsi    # 0x28b438
movq %r15, %rdx
movq %r12, %rcx
callq 0x115c9a
testl %eax, %eax
je 0x27e19
leaq 0x2636f4(%rip), %rax    # 0x28b430
movq (%rax), %rax
movq %rax, (%rbx)
leaq 0x2636ef(%rip), %rax    # 0x28b438
movq (%rax), %rax
movq %rax, 0x8(%rbx)
movq %r14, 0x30(%rbx)
testl %ebp, %ebp
leaq 0x2629fb(%rip), %rbp    # 0x28a758
je 0x27d9c
cmpl $0x0, 0xf0(%rbp)
je 0x27d7b
leaq 0x38(%rbx), %rdi
movq %r15, %rsi
movq %r12, %rdx
callq 0x1dbe33
testl %eax, %eax
jne 0x27d9c
movq 0x28(%rbx), %rdx
movq %r12, %rdi
movq %r13, %rsi
callq 0x1dbf42
movq %rax, 0x38(%rbx)
movq %rax, %rdi
movq %r15, %rsi
movq %r12, %rdx
callq 0x1dbec8
pushq $0x1
popq %rdx
movq %rbx, %rdi
movq %r15, %rsi
callq 0x1c3cb5
movq 0x68(%rbp), %rsi
movq %rbx, %rdi
callq 0x1d7ef7
movq %rbx, %rdi
callq 0x1c3d52
andq $0x0, (%r14)
movq %r14, %rdi
callq 0x1dbcbe
leaq 0x26365f(%rip), %rax    # 0x28b430
movq (%rax), %rdi
callq 0x114a78
leaq 0x263658(%rip), %rax    # 0x28b438
movq (%rax), %rdi
callq 0x113930
andq $0x0, 0x30(%rbx)
xorps %xmm0, %xmm0
movups %xmm0, (%rbx)
movq 0x38(%rbx), %rdi
callq 0x1dbddd
movq 0x38(%rbx), %rdi
callq 0x2220
andq $0x0, 0x38(%rbx)
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq (%r14), %rdi
movq 0x10(%rbx), %rsi
movl 0x4(%rsp), %edx
callq 0x246b6
leaq 0x263600(%rip), %rax    # 0x28b430
movq (%rax), %rdi
leaq 0x2635fe(%rip), %rax    # 0x28b438
movq (%rax), %rsi
movq %r15, %rdx
movq %r12, %rcx
callq 0x115aed
jmp 0x27d35
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/inter.cpp
// Function: clean_contain_g0(uldat_t*)
void clean_contain_g0(uldat_t *sl)
{
	kt_for(sl->n_thread, clean_contained_chg, sl, R_INF.total_reads);
	asg_t *sg = (asg_t *)sl->rg; uint32_t k, cnt;
	for (k = cnt = 0; k < sg->n_seq; k++) {
		// if(is_contain_r((*(sl->uopt->ruIndex)), k)) {
		// 	fprintf(stderr, "[M::%s::]\t%.*s\n", __func__, (int)Get_NAME_LENGTH(R_INF, k), Get_NAME(R_INF, k));
		// }
		if(sg->seq_vis[k]) {
			asg_seq_del(sg, k); cnt++;
		}
		sg->seq_vis[k] = 0; 
	}
	if(cnt) asg_cleanup(sg);
	fprintf(stderr, "[M::%s::] # discard cread::%u\n", __func__, cnt); 
	// exit(1);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r12
pushq %rbx
movq %rdi, %rbx
movl 0x58(%rdi), %edi
leaq 0x26305d(%rip), %rax    # 0x28b230
movq 0x50(%rax), %rcx
leaq 0x1b4413(%rip), %rsi    # 0x1dc5f1
movq %rbx, %rdx
callq 0x1047b4
movq 0x20(%rbx), %rdi
xorl %ebx, %ebx
testl $0x7fffffff, 0x14(%rdi) # imm = 0x7FFFFFFF
je 0x282d4
xorl %eax, %eax
movl $0xffffffff, %ecx       # imm = 0xFFFFFFFF
xorl %ebx, %ebx
movq 0x30(%rdi), %rdx
cmpb $0x0, (%rdx,%rax)
je 0x282b7
movq 0x20(%rdi), %rdx
orl $0x80000000, (%rdx,%rax,8) # imm = 0x80000000
leaq (%rax,%rax), %rdx
xorl %esi, %esi
leaq (%rsi,%rdx), %r8
movq 0x28(%rdi), %r9
movq (%r9,%r8,8), %r10
movq %r10, %r9
andq %rcx, %r9
je 0x282a5
shrq $0x20, %r10
imulq $0x18, %r10, %r10
addq 0x8(%rdi), %r10
xorl %r11d, %r11d
imulq $0x18, %r11, %r14
orb $-0x80, 0xf(%r10,%r14)
movl 0x8(%r10,%r14), %r14d
xorq $0x1, %r14
movq 0x28(%rdi), %r15
movq (%r15,%r14,8), %r15
movq %r15, %r14
andq %rcx, %r14
je 0x2829d
movq 0x8(%rdi), %r12
shrq $0x20, %r15
imulq $0x18, %r14, %r14
imulq $0x18, %r15, %r15
addq %r12, %r15
addq $0xc, %r15
xorl %r12d, %r12d
movl -0x4(%r15,%r12), %ebp
xorl %r8d, %ebp
cmpl $0x1, %ebp
jne 0x28294
orb $-0x80, 0x3(%r15,%r12)
addq $0x18, %r12
cmpq %r12, %r14
jne 0x28281
incq %r11
cmpq %r9, %r11
jne 0x28244
leaq 0x1(%rsi), %r8
testq %rsi, %rsi
movq %r8, %rsi
je 0x28221
incl %ebx
movq 0x30(%rdi), %rdx
movb $0x0, (%rdx,%rax)
incq %rax
movl 0x14(%rdi), %edx
andl $0x7fffffff, %edx       # imm = 0x7FFFFFFF
cmpq %rdx, %rax
jb 0x28202
testl %ebx, %ebx
je 0x282dd
callq 0xa02fa
movq 0x261cfc(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
leaq 0x210360(%rip), %rsi    # 0x23864e
leaq 0x210378(%rip), %rdx    # 0x23866d
movl %ebx, %ecx
xorl %eax, %eax
popq %rbx
popq %r12
popq %r14
popq %r15
popq %rbp
jmp 0x22b0
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/inter.cpp
// Function: gen_contig_path(ug_opt_t const*, asg_t*, ma_ug_t*, ma_ug_t*)
scaf_res_t *gen_contig_path(const ug_opt_t *uopt, asg_t *sg, ma_ug_t *ctg, ma_ug_t *ref)
{
	mg_idxopt_t opt; uldat_t sl; int32_t cutoff; 
	init_aux_table(); ha_opt_update_cov(&asm_opt, asm_opt.hom_cov);
	cutoff = asm_opt.max_n_chain;
	init_mg_opt(&opt, !(asm_opt.flag&HA_F_NO_HPC), 19, 10, cutoff, asm_opt.max_n_chain, asm_opt.ul_error_rate, asm_opt.ul_error_rate, asm_opt.ul_error_rate_low, asm_opt.ul_error_rate_hpc, asm_opt.ul_ec_round);
	ul_idx_t *uu = gen_ul_idx_t(uopt, ref, sg, 0, 0, 1);
	init_uldat_t(&sl, NULL, NULL, &opt, CHUNK_SIZE, asm_opt.thread_num, uopt, uu); sl.rg = sg; sl.ug = ctg;

	scaf_res_t *res = work_ctg_path_gchains(&sl); uu->ug = NULL;
	destroy_ul_idx_t(uu);
	return res;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x178, %rsp            # imm = 0x178
movq %rcx, %r13
movq %rdx, (%rsp)
movq %rsi, %r14
movq %rdi, %r15
callq 0x3366f
leaq 0x262020(%rip), %r12    # 0x28a758
movl 0xd0(%r12), %esi
movq %r12, %rdi
callq 0x2f59
movl (%r12), %eax
movl 0xe8(%r12), %ecx
notl %eax
andl $0x1, %eax
movsd 0x228(%r12), %xmm0
movups 0x230(%r12), %xmm1
movl 0x240(%r12), %edx
movabsq $0x130000000a, %rsi     # imm = 0x130000000A
leaq 0x8(%rsp), %rbp
movq %rsi, (%rbp)
movl %ecx, 0x14(%rbp)
movl %eax, 0x10(%rbp)
movabsq $0x7a12000002710, %rax  # imm = 0x7A12000002710
movq %rax, 0x8(%rbp)
movabsq $0x271000000014, %rax   # imm = 0x271000000014
movq %rax, 0x18(%rbp)
movabsq $0x3f0000003e428f5c, %rax # imm = 0x3F0000003E428F5C
movq %rax, 0x50(%rbp)
movabsq $0x271000000019, %rax   # imm = 0x271000000019
movq %rax, 0x28(%rbp)
movaps 0x20b074(%rip), %xmm2   # 0x233840
movups %xmm2, 0x30(%rbp)
movabsq $0xb00000005, %rax      # imm = 0xB00000005
movq %rax, 0x20(%rbp)
movaps 0x20b06b(%rip), %xmm2   # 0x233850
movups %xmm2, 0x40(%rbp)
movl $0x3f4ccccd, 0x58(%rbp) # imm = 0x3F4CCCCD
movl %ecx, 0x80(%rbp)
movsd %xmm0, 0x60(%rbp)
movsd %xmm0, 0x68(%rbp)
movups %xmm1, 0x70(%rbp)
movl %edx, 0x84(%rbp)
pushq $0x1
popq %r9
movq %r15, %rdi
movq %r13, %rsi
movq %r14, %rdx
xorl %ecx, %ecx
xorl %r8d, %r8d
callq 0x1dbb50
movq %rax, %r13
movslq 0x7c(%r12), %rbx
leaq 0x90(%rsp), %r12
movl $0xe8, %edx
movq %r12, %rdi
xorl %esi, %esi
callq 0x20e0
movq %rbp, 0x10(%r12)
movq $0x3b9aca00, 0x50(%r12) # imm = 0x3B9ACA00
movq %rbx, 0x58(%r12)
movq %r13, 0x30(%r12)
movq %r15, 0x28(%r12)
movq %r14, 0x20(%r12)
movq (%rsp), %rax
movq %rax, 0x18(%r12)
movq %r12, %rdi
callq 0x25686
movq %rax, %rbx
andq $0x0, (%r13)
movq %r13, %rdi
callq 0x1dbcbe
movq %rbx, %rax
addq $0x178, %rsp            # imm = 0x178
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: stats_chimeric(asg_t*, ma_hit_t_alloc*, asg64_v*)
void stats_chimeric(asg_t *g, ma_hit_t_alloc* src, asg64_v *in)
{
    asg64_v tx = {0,0,0}, *b = NULL;
    uint32_t v, s[2] = {0};
    if(in) b = in;
    else b = &tx;
    b->n = 0;

    for (v = 0; v < g->n_seq; ++v) {
        if (g->seq[v].del) continue;
        s[if_sup_chimeric(&(src[v]), g->seq[v].len, b, 1)]++;
    }

    fprintf(stderr, "[M::%s::] ==> # non-chimeric:%u, # chimeric:%u\n", __func__, s[0], s[1]);
    if(!in) free(tx.a);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x28, %rsp
movq %rdx, %rbx
leaq 0x10(%rsp), %r14
andq $0x0, 0x10(%r14)
xorps %xmm0, %xmm0
andq $0x0, 0x8(%rsp)
movaps %xmm0, (%r14)
testq %rdx, %rdx
cmovneq %rdx, %r14
andq $0x0, (%r14)
testl $0x7fffffff, 0x14(%rdi) # imm = 0x7FFFFFFF
je 0x2b35c
movq %rsi, %r15
movq %rdi, %r12
xorl %r13d, %r13d
pushq $0x1
popq %rbp
movq 0x20(%r12), %rax
movslq (%rax,%r13,8), %rsi
testq %rsi, %rsi
js 0x2b346
movq %r15, %rdi
movq %r14, %rdx
movl %ebp, %ecx
callq 0x1e4c39
movl %eax, %eax
incl 0x8(%rsp,%rax,4)
incq %r13
movl 0x14(%r12), %eax
andl $0x7fffffff, %eax       # imm = 0x7FFFFFFF
addq $0x18, %r15
cmpq %rax, %r13
jb 0x2b325
movq 0x25ec7d(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
movl 0x8(%rsp), %ecx
movl 0xc(%rsp), %r8d
leaq 0x20ded9(%rip), %rsi    # 0x23924f
leaq 0x20df02(%rip), %rdx    # 0x23927f
xorl %eax, %eax
callq 0x22b0
testq %rbx, %rbx
je 0x2b398
addq $0x28, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq 0x20(%rsp), %rdi
addq $0x28, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x2220
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: debug_edges(asg64_v*, unsigned int*, unsigned int)
void debug_edges(asg64_v *dbg, uint32_t *l, uint32_t l_n) {
    uint32_t k, k_n, i, m;
    for (i = k = 0; i < l_n; i++) {
        fprintf(stderr, "# gid-%u: %u\n", i, l[i]);
        for (k_n = k + l[i]; k < k_n; k++) {
            dbg->a[k] <<= 32; dbg->a[k] += i;
        }
    }
    fprintf(stderr, "# dbg->n: %u\n", (uint32_t)dbg->n);
    
    radix_sort_srt64(dbg->a, dbg->a + dbg->n);
    for (k = 1, i = 0; k <= dbg->n; k++) {
        if(k == dbg->n || (dbg->a[k]>>32) != (dbg->a[i]>>32)) {
            if(k - i < l_n) {
                
                for (m = i; m < k; m++) {
                    fprintf(stderr, "eid->%lu, gid->%u\n", dbg->a[m]>>32, (uint32_t)dbg->a[m]);
                }
            }
            i = k;
        }
    }
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movq %rdi, %r14
movl %edx, 0x4(%rsp)
testl %edx, %edx
je 0x2b5e2
movq %rsi, %r15
movl 0x4(%rsp), %ebp
leaq 0x20e30e(%rip), %r12    # 0x23988a
xorl %r13d, %r13d
xorl %ebx, %ebx
movq 0x25ea58(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
movl (%r15,%r13,4), %ecx
movq %r12, %rsi
movl %r13d, %edx
xorl %eax, %eax
callq 0x22b0
movl (%r15,%r13,4), %ecx
addl %ebx, %ecx
cmpl %ecx, %ebx
jae 0x2b5da
movl %ebx, %ebx
leaq (,%rbx,8), %rax
addq 0x10(%r14), %rax
movl %ecx, %ecx
movq %rbx, %rdx
subq %rcx, %rdx
xorl %ecx, %ecx
movq (%rax,%rcx,8), %rsi
shlq $0x20, %rsi
orq %r13, %rsi
movq %rsi, (%rax,%rcx,8)
incq %rcx
movq %rdx, %rsi
addq %rcx, %rsi
jne 0x2b5be
addl %ecx, %ebx
incq %r13
cmpq %rbp, %r13
jne 0x2b581
movq 0x25e9f7(%rip), %r12    # 0x289fe0
movq (%r12), %rdi
movl (%r14), %edx
leaq 0x20e2a1(%rip), %rsi    # 0x239898
xorl %eax, %eax
callq 0x22b0
movq (%r14), %rax
movq 0x10(%r14), %rdi
leaq (%rdi,%rax,8), %rsi
callq 0x1e3b6a
movq (%r14), %rcx
testq %rcx, %rcx
je 0x2b68e
pushq $0x1
popq %r13
pushq $0x1
popq %rdx
leaq 0x20e282(%rip), %r15    # 0x2398a6
xorl %eax, %eax
movl %eax, %ebx
cmpq %rdx, %rcx
je 0x2b63f
movq 0x10(%r14), %rcx
movq (%rcx,%rbx,8), %rsi
xorq (%rcx,%rdx,8), %rsi
shrq $0x20, %rsi
je 0x2b680
movl %r13d, %ecx
subl %eax, %ecx
setbe %al
cmpl 0x4(%rsp), %ecx
setae %cl
orb %al, %cl
movl %r13d, %eax
jne 0x2b680
movl %r13d, %ebp
movq (%r12), %rdi
movq 0x10(%r14), %rax
movq (%rax,%rbx,8), %rcx
movq %rcx, %rdx
shrq $0x20, %rdx
movq %r15, %rsi
xorl %eax, %eax
callq 0x22b0
incq %rbx
cmpq %rbx, %rbp
jne 0x2b658
movl %r13d, %eax
incl %r13d
movq (%r14), %rcx
movq %r13, %rdx
cmpq %r13, %rcx
jae 0x2b626
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: print_cns_seq(ma_ug_t*, ul_str_t*, unsigned long*, unsigned long)
void print_cns_seq(ma_ug_t *ug, ul_str_t *str, uint64_t *cns_seq, uint64_t cns_occ)
{
    fprintf(stderr,"[M::%s::]\t", __func__);
    uint64_t k, ck;
    for (k = ck = 0; k < str->cn; k++) {
        for (; ck < cns_occ; ck++) {
            if(cns_seq[ck] >= k) break;
        }
        if(ck < cns_occ && cns_seq[ck] == k) {
            fprintf(stderr, "utg%.6d%c(%c)\t", (((uint32_t)str->a[k])>>1)+1, 
                    "lc"[ug->u.a[(((uint32_t)str->a[k])>>1)].circ], "+-"[(((uint32_t)str->a[k])&1)]);
        } else {
            fprintf(stderr, "*\t");
        }
    }
    fprintf(stderr,"\n");
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movq %rcx, %r12
movq %rdx, %r14
movq %rsi, %r15
movq %rdi, (%rsp)
movq 0x25e411(%rip), %rbp    # 0x289fe0
movq (%rbp), %rdi
leaq 0x20e791(%rip), %rsi    # 0x23a36b
leaq 0x20e795(%rip), %rdx    # 0x23a376
xorl %eax, %eax
callq 0x22b0
testl $0x7fffffff, 0x18(%r15) # imm = 0x7FFFFFFF
je 0x2bc8f
xorl %ebx, %ebx
xorl %r13d, %r13d
cmpq %r12, %rbx
jae 0x2bc64
cmpq %r13, (%r14,%rbx,8)
jae 0x2bc13
incq %rbx
cmpq %rbx, %r12
jne 0x2bc00
movq %r12, %rbx
jmp 0x2bc64
jne 0x2bc64
movq (%rbp), %rdi
movq 0x10(%r15), %rax
movq (%rax,%r13,8), %rax
movl %eax, %ecx
shrl %ecx
leal 0x1(%rcx), %edx
movq (%rsp), %rsi
movq 0x10(%rsi), %rsi
imulq $0x28, %rcx, %rcx
movl (%rsi,%rcx), %ecx
shrl $0x1f, %ecx
leaq 0x1fc9ea(%rip), %rsi    # 0x22862b
movsbl (%rcx,%rsi), %ecx
andl $0x1, %eax
leaq 0x1fa574(%rip), %rsi    # 0x2261c3
movsbl (%rax,%rsi), %r8d
leaq 0x207cda(%rip), %rsi    # 0x233935
xorl %eax, %eax
callq 0x22b0
jmp 0x2bc7a
movq (%rbp), %rcx
leaq 0x20e715(%rip), %rdi    # 0x23a384
pushq $0x2
popq %rsi
pushq $0x1
popq %rdx
callq 0x2410
incq %r13
movl 0x18(%r15), %eax
andl $0x7fffffff, %eax       # imm = 0x7FFFFFFF
cmpq %rax, %r13
jb 0x2bbfb
movq (%rbp), %rsi
pushq $0xa
popq %rdi
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x2270
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: print_res_seq(poa_g_t*, ma_ug_t*, unsigned int*, unsigned int)
void print_res_seq(poa_g_t *pg, ma_ug_t *ug, uint32_t *cns_seq, uint32_t cns_occ)
{
    fprintf(stderr,"[M::%s::]\t", __func__);
    uint64_t k;
    for (k = 0; k < cns_occ; k++) {
        fprintf(stderr, "utg%.6d%c(%c)\t", (pg->seq.a[(cns_seq[k]>>1)].nid>>1)+1, 
                "lc"[ug->u.a[(pg->seq.a[(cns_seq[k]>>1)].nid>>1)].circ], 
                "+-"[(pg->seq.a[(cns_seq[k]>>1)].nid&1)]);
        
    }
    fprintf(stderr,"\n");
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movl %ecx, %ebp
movq %rdx, %rbx
movq %rsi, %r14
movq %rdi, %r15
movq 0x25e31a(%rip), %r13    # 0x289fe0
movq (%r13), %rdi
leaq 0x20e69a(%rip), %rsi    # 0x23a36b
leaq 0x20e6af(%rip), %rdx    # 0x23a387
xorl %eax, %eax
callq 0x22b0
testl %ebp, %ebp
je 0x2bd40
movl %ebp, %ebp
xorl %r12d, %r12d
movq (%r13), %rdi
movq 0x10(%r15), %rax
movl (%rbx,%r12,4), %ecx
shrl %ecx
movl 0x4(%rax,%rcx,8), %eax
movl %eax, %ecx
shrl %ecx
imulq $0x28, %rcx, %rsi
movl %ecx, %edx
incl %edx
movq 0x10(%r14), %rcx
movl (%rcx,%rsi), %ecx
shrl $0x1f, %ecx
leaq 0x1fc914(%rip), %rsi    # 0x22862b
movsbl (%rcx,%rsi), %ecx
andl $0x1, %eax
leaq 0x1fa49e(%rip), %rsi    # 0x2261c3
movsbl (%rax,%rsi), %r8d
leaq 0x207c04(%rip), %rsi    # 0x233935
xorl %eax, %eax
callq 0x22b0
incq %r12
cmpq %r12, %rbp
jne 0x2bce8
movq (%r13), %rsi
pushq $0xa
popq %rdi
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x2270
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: print_ul_seq(ul_resolve_t*, unsigned long)
void print_ul_seq(ul_resolve_t *uidx, uint64_t id)
{
    uint64_t i; ul_str_t *str = &(uidx->pstr.str.a[id]); ma_ug_t *ug = uidx->init_ug;
    fprintf(stderr, "%.*s\tid::%lu\t", (int32_t)uidx->idx->nid.a[id].n, 
                                                        uidx->idx->nid.a[id].a, id);
    for (i = 0; i < str->cn; i++) {
        fprintf(stderr, "utg%.6d%c(%c)\t", (((uint32_t)str->a[i])>>1)+1, 
        "lc"[ug->u.a[(((uint32_t)str->a[i])>>1)].circ], "+-"[(((uint32_t)str->a[i])&1)]);
    }
    fprintf(stderr,"\n");
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movq %rsi, %r8
movq 0x1d0(%rdi), %r14
movq %rsi, %rbx
shlq $0x5, %rbx
movq 0x8(%rdi), %r15
movq 0x30(%rdi), %rax
movq 0x25e03c(%rip), %r12    # 0x289fe0
movq (%r12), %rdi
movq 0x10(%rax), %rax
movq %rsi, %rcx
shlq $0x4, %rcx
movl 0x8(%rax,%rcx), %edx
movq (%rax,%rcx), %rcx
leaq 0x207965(%rip), %rsi    # 0x233927
xorl %eax, %eax
callq 0x22b0
testl $0x7fffffff, 0x18(%r14,%rbx) # imm = 0x7FFFFFFF
je 0x2c037
addq %rbx, %r14
leaq 0x1fa1e5(%rip), %rbp    # 0x2261c3
leaq 0x207950(%rip), %rbx    # 0x233935
xorl %r13d, %r13d
movq (%r12), %rdi
movq 0x10(%r14), %rax
movq (%rax,%r13,8), %rax
movl %eax, %ecx
shrl %ecx
leal 0x1(%rcx), %edx
movq 0x10(%r15), %rsi
imulq $0x28, %rcx, %rcx
movl (%rsi,%rcx), %ecx
shrl $0x1f, %ecx
leaq 0x1fc61b(%rip), %rsi    # 0x22862b
movsbl (%rcx,%rsi), %ecx
andl $0x1, %eax
movsbl (%rax,%rbp), %r8d
movq %rbx, %rsi
xorl %eax, %eax
callq 0x22b0
incq %r13
movl 0x18(%r14), %eax
andl $0x7fffffff, %eax       # imm = 0x7FFFFFFF
cmpq %rax, %r13
jb 0x2bfe8
movq (%r12), %rsi
pushq $0xa
popq %rdi
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x2270
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: print_integert_ovlp_stat(ul2ul_idx_t*)
void print_integert_ovlp_stat(ul2ul_idx_t *ul2)
{
    uint64_t i, k, occ_r = 0, occ_o = 0; ul2ul_item_t *o;
    for (i = 0; i < ul2->uln; i++) {
        o = get_ul_ovlp(ul2, ulg_id(*ul2, i), ulg_type(*ul2, i));
        if((!o) || (o->is_del)) continue;
        occ_r++;
        for (k = 0; k < o->n; k++) {
            if(o->a[k].is_del || o->a[k].is_ct || (!ulg_type(*ul2, o->a[k].hid))) continue;
            occ_o++;
        }
    }
    fprintf(stderr, "[M::%s::] # UL reads::%lu, # UL ovlps::%lu\n", __func__, occ_r, occ_o);
}

// Assembly:
pushq %rbx
movq 0x18(%rdi), %rax
testq %rax, %rax
jne 0x2c062
xorl %ecx, %ecx
xorl %r8d, %r8d
jmp 0x2c0c5
movq 0x30(%rdi), %rdx
xorl %esi, %esi
movl $0xffffffff, %r9d       # imm = 0xFFFFFFFF
xorl %r8d, %r8d
xorl %ecx, %ecx
movl (%rdx,%rsi,4), %r11d
cmpq %r9, %r11
je 0x2c085
shlq $0x5, %r11
addq (%rdi), %r11
jmp 0x2c088
xorl %r11d, %r11d
testq %r11, %r11
je 0x2c0bd
cmpl $0x0, 0x18(%r11)
js 0x2c0bd
incq %rcx
movq 0x8(%r11), %r10
testq %r10, %r10
je 0x2c0bd
movq (%r11), %r11
cmpb $0x3f, 0x24(%r11)
ja 0x2c0b4
movl (%r11), %ebx
cmpq %rax, %rbx
adcq $0x0, %r8
addq $0x28, %r11
decq %r10
jne 0x2c0a3
incq %rsi
cmpq %rax, %rsi
jne 0x2c073
movq 0x25df14(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
leaq 0x20f832(%rip), %rsi    # 0x23b908
leaq 0x20f857(%rip), %rdx    # 0x23b934
xorl %eax, %eax
popq %rbx
jmp 0x22b0
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/gfa_ut.cpp
// Function: prt_sub_integer_path(asg64_v*, unsigned long, unsigned long, unsigned long, unsigned long, unsigned long)
void prt_sub_integer_path(asg64_v *res, uint64_t it, uint64_t w0, uint64_t w1, uint64_t z_n, uint64_t z)
{
    uint64_t k;
    fprintf(stderr, "(it::%lu) res->n::%u, w0::%lu, w1::%lu, z_n::%lu, z::%lu\n", it, (uint32_t)res->n, 
    w0, w1, z_n, z);
    for (k = 0; k < res->n; k++) {
        fprintf(stderr, "(it::%lu) utg%.6dl,", it, (int32_t)(res->a[k]>>1)+1);
    }
    fprintf(stderr, "\n");
}

// Assembly:
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
movq %r9, %r10
movq %r8, %r11
movq %rcx, %r9
movq %rdx, %r8
movq %rsi, %rbx
movq %rdi, %r14
movq 0x25ded9(%rip), %r12    # 0x289fe0
movq (%r12), %rdi
movl (%r14), %ecx
leaq 0x21100c(%rip), %rsi    # 0x23d121
movq %rbx, %rdx
xorl %eax, %eax
pushq %r10
pushq %r11
callq 0x22b0
addq $0x10, %rsp
cmpq $0x0, (%r14)
je 0x2c15d
leaq 0x211027(%rip), %r15    # 0x23d15b
xorl %r13d, %r13d
movq (%r12), %rdi
movq 0x10(%r14), %rax
movq (%rax,%r13,8), %rcx
shrq %rcx
incl %ecx
movq %r15, %rsi
movq %rbx, %rdx
xorl %eax, %eax
callq 0x22b0
incq %r13
cmpq (%r14), %r13
jb 0x2c137
movq (%r12), %rsi
pushq $0xa
popq %rdi
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
jmp 0x2270
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/CommandLines.cpp
// Function: destory_enzyme(enzyme*)
void destory_enzyme(enzyme* f)
{
    int i;
    if(f != NULL)
    {
        for (i = 0; i < f->n; i++)
        {
            free(f->a[i]);
        }
        free(f->a);
        free(f->l);
        free(f);
    }
}

// Assembly:
testq %rdi, %rdi
je 0x304cc
pushq %r14
pushq %rbx
pushq %rax
movq %rdi, %rbx
cmpl $0x0, 0x8(%rdi)
jle 0x304ac
xorl %r14d, %r14d
movq 0x10(%rbx), %rax
movq (%rax,%r14,8), %rdi
callq 0x2220
incq %r14
movslq 0x8(%rbx), %rax
cmpq %rax, %r14
jl 0x30493
movq 0x10(%rbx), %rdi
callq 0x2220
movq (%rbx), %rdi
callq 0x2220
movq %rbx, %rdi
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0x2220
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/CommandLines.cpp
// Function: destory_opt(hifiasm_opt_t*)
void destory_opt(hifiasm_opt_t* asm_opt)
{
    if(asm_opt->read_file_names != NULL) free(asm_opt->read_file_names);
    if(asm_opt->hic_enzymes != NULL) destory_enzyme(asm_opt->hic_enzymes);
    if(asm_opt->hic_reads[0] != NULL) destory_enzyme(asm_opt->hic_reads[0]);
    if(asm_opt->hic_reads[1] != NULL) destory_enzyme(asm_opt->hic_reads[1]);
    if(asm_opt->ar != NULL) destory_enzyme(asm_opt->ar);
}

// Assembly:
pushq %rbx
movq %rdi, %rbx
movq 0x8(%rdi), %rdi
testq %rdi, %rdi
je 0x304df
callq 0x2220
movq 0x60(%rbx), %rdi
testq %rdi, %rdi
je 0x304ed
callq 0x3047e
movq 0x50(%rbx), %rdi
testq %rdi, %rdi
je 0x304fb
callq 0x3047e
movq 0x58(%rbx), %rdi
testq %rdi, %rdi
je 0x30509
callq 0x3047e
movq 0x68(%rbx), %rdi
testq %rdi, %rdi
je 0x30518
popq %rbx
jmp 0x3047e
popq %rbx
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/CommandLines.cpp
// Function: check_file(char*, char const*)
static int check_file(char* name, const char* opt)
{
    if(!name)
    {
        fprintf(stderr, "[ERROR] file does not exist (-%s)\n", opt);
        return 0;
    } 
    FILE* is_exist = NULL;
    is_exist = fopen(name,"r");
    if(!is_exist)
    {
        fprintf(stderr, "[ERROR] %s does not exist (-%s)\n", name, opt);
        return 0;
    } 

    fclose(is_exist);
    return 1;
}

// Assembly:
pushq %rbp
pushq %r14
pushq %rbx
movq %rsi, %rbx
testq %rdi, %rdi
je 0x30aa5
movq %rdi, %r14
leaq 0x202b20(%rip), %rsi    # 0x2335a7
callq 0x2210
testq %rax, %rax
je 0x30ac4
movq %rax, %rdi
callq 0x2190
movl $0x1, %ebp
movl %ebp, %eax
popq %rbx
popq %r14
popq %rbp
retq
movq 0x259534(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
leaq 0x1f383c(%rip), %rsi    # 0x2242f2
xorl %ebp, %ebp
movq %rbx, %rdx
xorl %eax, %eax
callq 0x22b0
jmp 0x30a9e
movq 0x259515(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
leaq 0x1f3840(%rip), %rsi    # 0x224315
xorl %ebp, %ebp
movq %r14, %rdx
movq %rbx, %rcx
xorl %eax, %eax
callq 0x22b0
jmp 0x30a9e
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/CommandLines.cpp
// Function: check_fq_files(enzyme*, char const*, int)
static int check_fq_files(enzyme* f, const char* opt, int32_t is_fq)
{
    int32_t i, ret; gzFile dfp; kseq_t *ks = NULL;
    for (i = 0; i < f->n; i++) {
        if(!(f->a[i])) {
            fprintf(stderr, "[ERROR] input file does not exist (%s)\n", opt);
            return 0;
        }

        dfp = gzopen(f->a[i], "r");
        if (dfp == 0) {
            fprintf(stderr, "[ERROR] Cannot find the input file: %s (%s)\n", f->a[i], opt);
            return 0;
        } else if(is_fq){
            ks = kseq_init(dfp);
            while (((ret = kseq_read(ks)) >= 0)) {
                if((ks->qual.l == 0) || (ks->qual.s == NULL)) {
                    fprintf(stderr, "[ERROR] %s is in fasta format rather than fastq format (%s)\n", f->a[i], opt);
                    fprintf(stderr, "[ERROR] set --ul-m 0 for fasta files\n");
                    return 0;
                }
                break;
            }
            kseq_destroy(ks); ks = NULL;
        }
        gzclose(dfp);
    }
    return 1;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movl $0x1, %ebx
cmpl $0x0, 0x8(%rdi)
jle 0x30bc0
movl %esi, %ebp
movq %rdi, %r14
xorl %r15d, %r15d
leaq 0x202a4e(%rip), %r12    # 0x2335a7
movq 0x10(%r14), %rax
movq (%rax,%r15,8), %rdi
testq %rdi, %rdi
je 0x30bd1
movq %r12, %rsi
callq 0x22d0
testq %rax, %rax
je 0x30bd8
movq %rax, %r13
testl %ebp, %ebp
je 0x30ba7
movq %r13, %rdi
callq 0x30cfc
movq %rax, %rbx
movq %rax, %rdi
callq 0x30d46
testl %eax, %eax
js 0x30b9f
cmpq $0x0, 0x48(%rbx)
je 0x30c03
cmpq $0x0, 0x58(%rbx)
je 0x30c03
movq %rbx, %rdi
callq 0x310cd
movq %r13, %rdi
callq 0x2390
incq %r15
movslq 0x8(%r14), %rax
cmpq %rax, %r15
jl 0x30b59
movl $0x1, %ebx
movl %ebx, %eax
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0x34d2
jmp 0x30c0e
movq 0x259401(%rip), %rax    # 0x289fe0
movq (%rax), %rdi
movq 0x10(%r14), %rax
movq (%rax,%r15,8), %rdx
leaq 0x1f376d(%rip), %rsi    # 0x22435e
leaq 0x1f348d(%rip), %rcx    # 0x224085
xorl %ebx, %ebx
xorl %eax, %eax
callq 0x22b0
jmp 0x30bc0
movq %r14, %rdi
movq %r15, %rsi
callq 0x3491
xorl %ebx, %ebx
jmp 0x30bc0
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/CommandLines.cpp
// Function: get_queries(int, char**, ketopt_t*, hifiasm_opt_t*)
void get_queries(int argc, char *argv[], ketopt_t* opt, hifiasm_opt_t* asm_opt)
{
    if(opt->ind == argc) {
        return;
    }

    asm_opt->num_reads = argc - opt->ind;
    asm_opt->read_file_names = (char**)malloc(sizeof(char*)*asm_opt->num_reads);
    
    long long i; int ret;
    gzFile dfp; kseq_t *ks = NULL;
    for (i = 0; i < asm_opt->num_reads; i++) {
        asm_opt->read_file_names[i] = argv[i + opt->ind];
        dfp = gzopen(asm_opt->read_file_names[i], "r");
        if (dfp == 0) {
            fprintf(stderr, "[ERROR] Cannot find the input read file: %s\n", 
                    asm_opt->read_file_names[i]);
		    exit(0);
        } else if(asm_opt->is_sc){
            ks = kseq_init(dfp);
            while (((ret = kseq_read(ks)) >= 0)) {
                if((ks->qual.l == 0) || (ks->qual.s == NULL)) {
                    fprintf(stderr, "[ERROR] %s is in fasta format rather than fastq format\n", asm_opt->read_file_names[i]);
                    asm_opt->is_sc = 0;
                    exit(0);
                }
                break;
            }
            kseq_destroy(ks); ks = NULL;
        }
        gzclose(dfp);
    }
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movq %rsi, (%rsp)
subl (%rdx), %edi
je 0x30cd4
movq %rcx, %rbx
movq %rdx, %r14
movl %edi, 0x4(%rcx)
movslq %edi, %r15
leaq (,%r15,8), %rdi
callq 0x2280
movq %rax, 0x8(%rbx)
testl %r15d, %r15d
jle 0x30cd4
leaq 0x8(%rbx), %r13
xorl %r12d, %r12d
movslq (%r14), %rax
movq (%rsp), %rcx
leaq (%rcx,%rax,8), %rax
movq (%rax,%r12,8), %rax
movq (%r13), %rcx
movq %rax, (%rcx,%r12,8)
movq (%r13), %rax
movq (%rax,%r12,8), %rdi
leaq 0x20292b(%rip), %rsi    # 0x2335a7
callq 0x22d0
testq %rax, %rax
je 0x30ce3
movq %rax, %rbp
cmpq $0x0, 0x2b0(%rbx)
je 0x30cc0
movq %rbp, %rdi
callq 0x30cfc
movq %rax, %r15
movq %rax, %rdi
callq 0x30d46
testl %eax, %eax
js 0x30cb8
cmpq $0x0, 0x48(%r15)
je 0x30cee
cmpq $0x0, 0x58(%r15)
je 0x30cee
movq %r15, %rdi
callq 0x310cd
movq %rbp, %rdi
callq 0x2390
incq %r12
movslq 0x4(%rbx), %rax
cmpq %rax, %r12
jl 0x30c56
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq %r13, %rdi
movq %r12, %rsi
callq 0x3523
movq %rbx, %rdi
movq %r13, %rsi
movq %r12, %rdx
callq 0x34f1
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/CommandLines.cpp
// Function: inter_gsize(char*)
int64_t inter_gsize(char *argv)
{
    int64_t len = strlen(argv);
    double s;
    if(len <= 1) return -2;
    char t = argv[len-1];
    if(t != 'k' && t != 'K' && t != 'm' && t != 'M' && t != 'g' && t != 'G') return -2;
    char *ss=(char*)malloc(len);
    memcpy(ss, argv, len-1); ss[len-1] = '\0';
    s = atof(ss);
    free(ss);
    if(t == 'k' || t == 'K') return s*1000;
    if(t == 'm' || t == 'M') return s*1000000;
    if(t == 'g' || t == 'G') return s*1000000000;
    return s;
}

// Assembly:
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x10, %rsp
movq %rdi, %rbx
callq 0x2090
movq %rax, %r14
movq $-0x2, %rax
cmpq $0x2, %r14
jl 0x313e1
movzbl -0x1(%rbx,%r14), %r13d
leal -0x47(%r13), %ecx
cmpl $0x26, %ecx
ja 0x313e1
movabsq $0x5100000051, %rdx     # imm = 0x5100000051
btq %rcx, %rdx
jae 0x313e1
movq %r14, %r15
decq %r15
movq %r14, %rdi
callq 0x2280
movq %rax, %r12
movq %rax, %rdi
movq %rbx, %rsi
movq %r15, %rdx
callq 0x2160
movb $0x0, -0x1(%r12,%r14)
movq %r12, %rdi
callq 0x2260
movsd %xmm0, 0x8(%rsp)
movq %r12, %rdi
callq 0x2220
andl $0x4f, %r13d
cmpl $0x47, %r13d
je 0x313ce
cmpl $0x4d, %r13d
je 0x313be
cmpl $0x4b, %r13d
movsd 0x8(%rsp), %xmm0
jne 0x313dc
mulsd 0x1f0c6c(%rip), %xmm0   # 0x222028
jmp 0x313dc
movsd 0x8(%rsp), %xmm0
mulsd 0x1f0c3c(%rip), %xmm0   # 0x222008
jmp 0x313dc
movsd 0x8(%rsp), %xmm0
mulsd 0x1f0c44(%rip), %xmm0   # 0x222020
cvttsd2si %xmm0, %rax
addq $0x10, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/Process_Read.cpp
// Function: init_All_reads(All_reads*)
void init_All_reads(All_reads* r)
{
	memset(r, 0, sizeof(All_reads));
	r->index_size = READ_INIT_NUMBER;
	r->read_length = (uint64_t*)malloc(sizeof(uint64_t)*r->index_size);
	r->name_index_size = READ_INIT_NUMBER;
	r->name_index = (uint64_t*)malloc(sizeof(uint64_t)*r->name_index_size);
	r->name_index[0] = 0;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rdi, %rbx
movl $0x88, %edx
xorl %esi, %esi
callq 0x20e0
movl $0x3e8, %r14d           # imm = 0x3E8
movq %r14, 0x38(%rbx)
movl $0x1f40, %edi           # imm = 0x1F40
callq 0x2280
movq %rax, 0x18(%rbx)
movq %r14, 0x48(%rbx)
movl $0x1f40, %edi           # imm = 0x1F40
callq 0x2280
movq %rax, 0x40(%rbx)
movq $0x0, (%rax)
addq $0x8, %rsp
popq %rbx
popq %r14
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/Process_Read.cpp
// Function: destory_All_reads(All_reads*)
void destory_All_reads(All_reads* r)
{
	uint64_t i = 0;
	for (i = 0; i < r->total_reads; i++) {
		if (r->N_site[i]) free(r->N_site[i]);
		if (r->read_sperate[i]) free(r->read_sperate[i]);
		if (r->paf && r->paf[i].buffer) free(r->paf[i].buffer);
		if (r->reverse_paf && r->reverse_paf[i].buffer) free(r->reverse_paf[i].buffer);
		if(r->rsc && r->rsc[i]) free(r->rsc[i]);
		///if (r->pb_regions) kv_destroy(r->pb_regions[i].a);
	}
	free(r->paf);
	free(r->reverse_paf);
	free(r->N_site);
	free(r->read_sperate);
	free(r->name);
	free(r->name_index);
	free(r->read_length);
	free(r->trio_flag);
	free(r->rsc);
	///if (r->pb_regions) free(r->pb_regions);
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
movq %rdi, %rbx
cmpq $0x0, 0x50(%rdi)
je 0x32629
xorl %r14d, %r14d
xorl %r15d, %r15d
movq (%rbx), %rax
movq (%rax,%r15,8), %rdi
testq %rdi, %rdi
je 0x325c2
callq 0x2220
movq 0x10(%rbx), %rax
movq (%rax,%r15,8), %rdi
testq %rdi, %rdi
je 0x325d4
callq 0x2220
movq 0x78(%rbx), %rax
testq %rax, %rax
je 0x325eb
movq (%rax,%r14), %rdi
testq %rdi, %rdi
je 0x325eb
callq 0x2220
movq 0x80(%rbx), %rax
testq %rax, %rax
je 0x32605
movq (%rax,%r14), %rdi
testq %rdi, %rdi
je 0x32605
callq 0x2220
movq 0x30(%rbx), %rax
testq %rax, %rax
je 0x3261c
movq (%rax,%r15,8), %rdi
testq %rdi, %rdi
je 0x3261c
callq 0x2220
incq %r15
addq $0x18, %r14
cmpq 0x50(%rbx), %r15
jb 0x325b1
movq 0x78(%rbx), %rdi
callq 0x2220
movq 0x80(%rbx), %rdi
callq 0x2220
movq (%rbx), %rdi
callq 0x2220
movq 0x10(%rbx), %rdi
callq 0x2220
movq 0x8(%rbx), %rdi
callq 0x2220
movq 0x40(%rbx), %rdi
callq 0x2220
movq 0x18(%rbx), %rdi
callq 0x2220
movq 0x28(%rbx), %rdi
callq 0x2220
movq 0x30(%rbx), %rdi
popq %rbx
popq %r14
popq %r15
jmp 0x2220
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/Process_Read.cpp
// Function: read_ma(ma_hit_t*, _IO_FILE*)
void read_ma(ma_hit_t* x, FILE* fp)
{
    int f_flag;
    f_flag = fread(&(x->qns), sizeof(x->qns), 1, fp);
    f_flag += fread(&(x->qe), sizeof(x->qe), 1, fp);
    f_flag += fread(&(x->tn), sizeof(x->tn), 1, fp);
    f_flag += fread(&(x->ts), sizeof(x->ts), 1, fp);
    f_flag += fread(&(x->te), sizeof(x->te), 1, fp);
    f_flag += fread(&(x->el), sizeof(x->el), 1, fp);
    f_flag += fread(&(x->no_l_indel), sizeof(x->no_l_indel), 1, fp);

    uint32_t t;
    f_flag += fread(&(t), sizeof(t), 1, fp);
    x->ml = t;

    f_flag += fread(&(t), sizeof(t), 1, fp);
    x->rev = t;
    
    f_flag += fread(&(t), sizeof(t), 1, fp);
    x->bl = t;

    f_flag += fread(&(t), sizeof(t), 1, fp);
    x->del = t;
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
subq $0x10, %rsp
movq %rsi, %r14
movq %rdi, %rbx
movl $0x8, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0x8(%rbx), %rdi
movl $0x4, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0xc(%rbx), %rdi
movl $0x4, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0x10(%rbx), %rdi
movl $0x4, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0x14(%rbx), %rdi
movl $0x4, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0x20(%rbx), %rdi
movl $0x1, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0x21(%rbx), %rdi
movl $0x1, %esi
movl $0x1, %edx
movq %r14, %rcx
callq 0x22f0
leaq 0xc(%rsp), %r15
movl $0x4, %esi
movl $0x1, %edx
movq %r15, %rdi
movq %r14, %rcx
callq 0x22f0
movl (%r15), %eax
andl $0x1, %eax
shll $0x1e, %eax
movq $-0x40000001, %rcx      # imm = 0xBFFFFFFF
andq 0x18(%rbx), %rcx
orq %rax, %rcx
movq %rcx, 0x18(%rbx)
movl $0x4, %esi
movl $0x1, %edx
movq %r15, %rdi
movq %r14, %rcx
callq 0x22f0
movl (%r15), %eax
shll $0x1f, %eax
movabsq $-0x80000001, %rcx      # imm = 0xFFFFFFFF7FFFFFFF
andq 0x18(%rbx), %rcx
orq %rax, %rcx
movq %rcx, 0x18(%rbx)
movl $0x4, %esi
movl $0x1, %edx
movq %r15, %rdi
movq %r14, %rcx
callq 0x22f0
movl $0x7fffffff, %eax       # imm = 0x7FFFFFFF
andl (%r15), %eax
shlq $0x20, %rax
movabsq $-0x7fffffff00000001, %rcx # imm = 0x80000000FFFFFFFF
andq 0x18(%rbx), %rcx
orq %rax, %rcx
movq %rcx, 0x18(%rbx)
movl $0x4, %esi
movl $0x1, %edx
movq %r15, %rdi
movq %r14, %rcx
callq 0x22f0
movl (%r15), %eax
shlq $0x3f, %rax
movabsq $0x7fffffffffffffff, %rcx # imm = 0x7FFFFFFFFFFFFFFF
andq 0x18(%rbx), %rcx
orq %rax, %rcx
movq %rcx, 0x18(%rbx)
addq $0x10, %rsp
popq %rbx
popq %r14
popq %r15
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/Process_Read.cpp
// Function: destory_read_bin(All_reads*)
int destory_read_bin(All_reads* r)
{

	uint64_t i = 0;
	for (i = 0; i < r->total_reads; i++)
	{
		if (r->N_site[i]) free(r->N_site[i]);
		if (r->read_sperate[i]) free(r->read_sperate[i]);
		if (r->cigars[i].record) free(r->cigars[i].record);
		if (r->cigars[i].lost_base) free(r->cigars[i].lost_base);
		if (r->second_round_cigar[i].record) free(r->second_round_cigar[i].record);
		if (r->second_round_cigar[i].lost_base) free(r->second_round_cigar[i].lost_base);
	}

	free(r->N_site);
	free(r->read_length);
	free(r->read_size);
	free(r->read_sperate);
	free(r->name);
	free(r->name_index);
	free(r->trio_flag);
	free(r->cigars);
	free(r->second_round_cigar);
	return 1;
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
movq %rdi, %rbx
cmpq $0x0, 0x50(%rdi)
je 0x333b5
xorl %r14d, %r14d
xorl %r15d, %r15d
movq (%rbx), %rax
movq (%rax,%r15,8), %rdi
testq %rdi, %rdi
je 0x3334c
callq 0x2220
movq 0x10(%rbx), %rax
movq (%rax,%r15,8), %rdi
testq %rdi, %rdi
je 0x3335e
callq 0x2220
movq 0x68(%rbx), %rax
movq (%rax,%r14), %rdi
testq %rdi, %rdi
je 0x33370
callq 0x2220
movq 0x68(%rbx), %rax
movq 0x10(%rax,%r14), %rdi
testq %rdi, %rdi
je 0x33383
callq 0x2220
movq 0x70(%rbx), %rax
movq (%rax,%r14), %rdi
testq %rdi, %rdi
je 0x33395
callq 0x2220
movq 0x70(%rbx), %rax
movq 0x10(%rax,%r14), %rdi
testq %rdi, %rdi
je 0x333a8
callq 0x2220
incq %r15
addq $0x28, %r14
cmpq 0x50(%rbx), %r15
jb 0x3333b
movq (%rbx), %rdi
callq 0x2220
movq 0x18(%rbx), %rdi
callq 0x2220
movq 0x20(%rbx), %rdi
callq 0x2220
movq 0x10(%rbx), %rdi
callq 0x2220
movq 0x8(%rbx), %rdi
callq 0x2220
movq 0x40(%rbx), %rdi
callq 0x2220
movq 0x28(%rbx), %rdi
callq 0x2220
movq 0x68(%rbx), %rdi
callq 0x2220
movq 0x70(%rbx), %rdi
callq 0x2220
movl $0x1, %eax
popq %rbx
popq %r14
popq %r15
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/Process_Read.cpp
// Function: ha_insert_read_len(All_reads*, int, int)
void ha_insert_read_len(All_reads *r, int read_len, int name_len)
{
	r->total_reads++;
	r->total_reads_bases += (uint64_t)read_len;
	r->total_name_length += (uint64_t)name_len;

	// must +1
	if (r->index_size < r->total_reads + 2) {
		r->index_size = r->index_size * 2 + 2;
		r->read_length = (uint64_t*)realloc(r->read_length, sizeof(uint64_t) * r->index_size);
		r->name_index_size = r->name_index_size * 2 + 2;
		r->name_index = (uint64_t*)realloc(r->name_index, sizeof(uint64_t) * r->name_index_size);
	}

	r->read_length[r->total_reads - 1] = read_len;
	r->name_index[r->total_reads] = r->name_index[r->total_reads - 1] + name_len;
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
movq %rdi, %rbx
movq 0x38(%rdi), %rax
movq 0x50(%rdi), %rcx
leaq 0x1(%rcx), %rdi
movq %rdi, 0x50(%rbx)
movslq %esi, %r15
addq %r15, 0x58(%rbx)
movslq %edx, %r14
addq %r14, 0x60(%rbx)
addq $0x3, %rcx
cmpq %rcx, %rax
jae 0x3348b
leaq 0x2(,%rax,2), %rcx
addq %rax, %rax
movq %rcx, 0x38(%rbx)
movq 0x18(%rbx), %rdi
leaq 0x10(,%rax,8), %rsi
callq 0x2370
movq %rax, 0x18(%rbx)
movq 0x40(%rbx), %rdi
movq 0x48(%rbx), %rax
leaq 0x2(,%rax,2), %rcx
addq %rax, %rax
movq %rcx, 0x48(%rbx)
leaq 0x10(,%rax,8), %rsi
callq 0x2370
movq %rax, 0x40(%rbx)
movq 0x18(%rbx), %rax
movq 0x50(%rbx), %rcx
movq %r15, -0x8(%rax,%rcx,8)
movq 0x40(%rbx), %rax
movq 0x50(%rbx), %rcx
addq -0x8(%rax,%rcx,8), %r14
movq %r14, (%rax,%rcx,8)
popq %rbx
popq %r14
popq %r15
retq
// File: /workspace/github_cpp_makefile_star2_O1/chhylp123[P]hifiasm/Process_Read.cpp
// Function: init_aux_table()
void init_aux_table()
{
	if (bit_t_seq_table[0][0] == 0)
	{
		uint64_t i = 0;

		for (i = 0; i < 256; i++)
		{
			bit_t_seq_table[i][0] = s_H[((i >> 6)&(uint64_t)3)];
			bit_t_seq_table[i][1] = s_H[((i >> 4)&(uint64_t)3)];
			bit_t_seq_table[i][2] = s_H[((i >> 2)&(uint64_t)3)];
			bit_t_seq_table[i][3] = s_H[(i&(uint64_t)3)];

			bit_t_seq_table_rc[i][0] = RC_CHAR(bit_t_seq_table[i][3]);
			bit_t_seq_table_rc[i][1] = RC_CHAR(bit_t_seq_table[i][2]);
			bit_t_seq_table_rc[i][2] = RC_CHAR(bit_t_seq_table[i][1]);
			bit_t_seq_table_rc[i][3] = RC_CHAR(bit_t_seq_table[i][0]);
		}
	}
}

// Assembly:
cmpb $0x0, 0x2573ba(%rip)    # 0x28aa30
je 0x33679
retq
pushq %rbx
xorl %eax, %eax
leaq 0x2570ad(%rip), %rcx    # 0x28a730
leaq 0x2573a6(%rip), %rdx    # 0x28aa30
leaq 0x256f9f(%rip), %rsi    # 0x28a630
leaq 0x25709d(%rip), %rdi    # 0x28a735
leaq 0x257791(%rip), %r8     # 0x28ae30
movq %rax, %r9
shrq $0x6, %r9
movzbl (%r9,%rcx), %r9d
movb %r9b, (%rdx,%rax,4)
movl %eax, %r10d
shrl $0x4, %r10d
andl $0x3, %r10d
movzbl (%r10,%rcx), %r10d
movb %r10b, 0x1(%rdx,%rax,4)
movl %eax, %r11d
shrl $0x2, %r11d
andl $0x3, %r11d
movzbl (%r11,%rcx), %r11d
movb %r11b, 0x2(%rdx,%rax,4)
movl %eax, %ebx
andl $0x3, %ebx
movzbl (%rbx,%rcx), %ebx
movb %bl, 0x3(%rdx,%rax,4)
movzbl (%rbx,%rsi), %ebx
movb (%rbx,%rdi), %bl
movb %bl, (%r8,%rax,4)
movzbl (%r11,%rsi), %r11d
movb (%r11,%rdi), %r11b
movb %r11b, 0x1(%r8,%rax,4)
movzbl (%r10,%rsi), %r10d
movb (%r10,%rdi), %r10b
movb %r10b, 0x2(%r8,%rax,4)
movzbl (%r9,%rsi), %r9d
movb (%r9,%rdi), %r9b
movb %r9b, 0x3(%r8,%rax,4)
incq %rax
cmpq $0x100, %rax            # imm = 0x100
jne 0x3369f
popq %rbx
retq