// File: millanek[P]evo/evo_diversity_subsampling.cpp
// Function: parseSubsamplingDxyOptions(int, char**)
void parseSubsamplingDxyOptions(int argc, char** argv) {
    bool die = false;
    for (char c; (c = getopt_long(argc, argv, shortopts, longopts, NULL)) != -1;)
    {
        std::istringstream arg(optarg != NULL ? optarg : "");
        switch (c)
        {
            case '?': die = true; break;
            case 's': arg >> opt::subsampleLength; break;
            case 'e': opt::bElements = true; break;
            case OPT_FOLDER: arg >> opt::outFolder; break;
            case 'h':
                std::cout << SUBSAMPLED_DXY_USAGE_MESSAGE;
                exit(EXIT_SUCCESS);
        }
    }
    
    if (argc - optind < 2) {
        std::cerr << "missing arguments\n";
        die = true;
    }
    else if (argc - optind > 2)
    {
        std::cerr << "too many arguments\n";
        die = true;
    }
    
    if (die) {
        std::cout << "\n" << SUBSAMPLED_DXY_USAGE_MESSAGE;
        exit(EXIT_FAILURE);
    }
    opt::bedFile = argv[optind++];
    opt::vcfFile = argv[optind++];
}

// Assembly:
pushq %rbp
movq %rsp, %rbp
subq $0x1f0, %rsp            # imm = 0x1F0
movl %edi, -0x4(%rbp)
movq %rsi, -0x10(%rbp)
movb $0x0, -0x11(%rbp)
movl -0x4(%rbp), %edi
movq -0x10(%rbp), %rsi
movq 0x15c1c4(%rip), %rdx    # 0x199698
leaq 0x159195(%rip), %rcx    # 0x196670
xorl %eax, %eax
movl %eax, %r8d
callq 0xaa40
movb %al, -0x12(%rbp)
movsbl %al, %eax
cmpl $-0x1, %eax
je 0x3d6b6
movq 0x15ba95(%rip), %rax    # 0x198f90
cmpq $0x0, (%rax)
je 0x3d514
movq 0x15ba88(%rip), %rax    # 0x198f90
movq (%rax), %rax
movq %rax, -0x1d8(%rbp)
jmp 0x3d524
leaq 0xf89c4(%rip), %rax     # 0x135edf
movq %rax, -0x1d8(%rbp)
jmp 0x3d524
movq -0x1d8(%rbp), %rax
movq %rax, -0x1e8(%rbp)
leaq -0x1b9(%rbp), %rdi
movq %rdi, -0x1e0(%rbp)
callq 0xab60
movq -0x1e8(%rbp), %rsi
movq -0x1e0(%rbp), %rdx
leaq -0x1b8(%rbp), %rdi
callq 0x2d6c0
jmp 0x3d561
leaq -0x198(%rbp), %rdi
leaq -0x1b8(%rbp), %rsi
movl $0x8, %edx
callq 0xaaa0
jmp 0x3d57b
leaq -0x1b8(%rbp), %rdi
callq 0xac88
leaq -0x1b9(%rbp), %rdi
callq 0xa640
movsbl -0x12(%rbp), %eax
movl %eax, -0x1ec(%rbp)
testl %eax, %eax
je 0x3d672
jmp 0x3d5a7
movl -0x1ec(%rbp), %eax
subl $0x3f, %eax
je 0x3d629
jmp 0x3d5b4
movl -0x1ec(%rbp), %eax
subl $0x65, %eax
je 0x3d669
jmp 0x3d5c5
movl -0x1ec(%rbp), %eax
subl $0x68, %eax
je 0x3d689
jmp 0x3d5d6
movl -0x1ec(%rbp), %eax
subl $0x73, %eax
je 0x3d62f
jmp 0x3d6a5
movq %rax, %rcx
movl %edx, %eax
movq %rcx, -0x1c8(%rbp)
movl %eax, -0x1cc(%rbp)
jmp 0x3d618
movq %rax, %rcx
movl %edx, %eax
movq %rcx, -0x1c8(%rbp)
movl %eax, -0x1cc(%rbp)
leaq -0x1b8(%rbp), %rdi
callq 0xac88
leaq -0x1b9(%rbp), %rdi
callq 0xa640
jmp 0x3d7a1
movb $0x1, -0x11(%rbp)
jmp 0x3d6a5
leaq 0x15c05a(%rip), %rsi    # 0x199690
leaq -0x198(%rbp), %rdi
callq 0xa370
jmp 0x3d644
jmp 0x3d6a5
movq %rax, %rcx
movl %edx, %eax
movq %rcx, -0x1c8(%rbp)
movl %eax, -0x1cc(%rbp)
leaq -0x198(%rbp), %rdi
callq 0xa290
jmp 0x3d7a1
movb $0x1, 0x15c638(%rip)    # 0x199ca8
jmp 0x3d6a5
leaq 0x15c60f(%rip), %rsi    # 0x199c88
leaq -0x198(%rbp), %rdi
callq 0xa750
jmp 0x3d687
jmp 0x3d6a5
movq 0x15c010(%rip), %rsi    # 0x1996a0
movq 0x15b921(%rip), %rdi    # 0x198fb8
callq 0xa5c0
jmp 0x3d69e
xorl %edi, %edi
callq 0xa700
leaq -0x198(%rbp), %rdi
callq 0xa290
jmp 0x3d4c6
movl -0x4(%rbp), %eax
movq 0x15b900(%rip), %rcx    # 0x198fc0
subl (%rcx), %eax
cmpl $0x2, %eax
jge 0x3d6e0
movq 0x15b922(%rip), %rdi    # 0x198ff0
leaq 0xf4d55(%rip), %rsi     # 0x13242a
callq 0xa5c0
movb $0x1, -0x11(%rbp)
jmp 0x3d70a
movl -0x4(%rbp), %eax
movq 0x15b8d6(%rip), %rcx    # 0x198fc0
subl (%rcx), %eax
cmpl $0x2, %eax
jle 0x3d708
movq 0x15b8f8(%rip), %rdi    # 0x198ff0
leaq 0xf4d3e(%rip), %rsi     # 0x13243d
callq 0xa5c0
movb $0x1, -0x11(%rbp)
jmp 0x3d70a
testb $0x1, -0x11(%rbp)
je 0x3d73c
movq 0x15b8a1(%rip), %rdi    # 0x198fb8
leaq 0xf216f(%rip), %rsi     # 0x12f88d
callq 0xa5c0
movq %rax, %rdi
movq 0x15bf73(%rip), %rsi    # 0x1996a0
callq 0xa5c0
movl $0x1, %edi
callq 0xa700
movq -0x10(%rbp), %rax
movq 0x15b879(%rip), %rcx    # 0x198fc0
movl (%rcx), %ecx
movl %ecx, %esi
addl $0x1, %esi
movq 0x15b86b(%rip), %rdx    # 0x198fc0
movl %esi, (%rdx)
movslq %ecx, %rcx
movq (%rax,%rcx,8), %rsi
leaq 0x15c4e3(%rip), %rdi    # 0x199c48
callq 0xa810
movq -0x10(%rbp), %rax
movq 0x15b84b(%rip), %rcx    # 0x198fc0
movl (%rcx), %ecx
movl %ecx, %esi
addl $0x1, %esi
movq 0x15b83d(%rip), %rdx    # 0x198fc0
movl %esi, (%rdx)
movslq %ecx, %rcx
movq (%rax,%rcx,8), %rsi
leaq 0x15c4d5(%rip), %rdi    # 0x199c68
callq 0xa810
addq $0x1f0, %rsp            # imm = 0x1F0
popq %rbp
retq
movq -0x1c8(%rbp), %rdi
callq 0xab50
nopl (%rax)