// File: /workspace/github_c_makefile_star2_O2/icebert[P]pblat/jkOwnLib/gfOut.c
// Function: pslOut
static void pslOut(char *chromName, int chromSize, int chromOffset, struct ffAli *ali, 
	struct dnaSeq *tSeq, struct hash *t3Hash, struct dnaSeq *qSeq, 
	boolean qIsRc, boolean tIsRc, 
	enum ffStringency stringency, int minMatch, struct gfOutput *out)
/* Save psl for more complex alignments. */
{
struct pslxData *outForm = out->data;

savePslx(chromName, chromSize, chromOffset, ali, tSeq, qSeq,
    qIsRc, stringency, minMatch, outForm->f, t3Hash, 
    out->reportTargetStrand, tIsRc,
    out->maskHash, out->minGood, 
    out->qIsProt, out->tIsProt, outForm->saveSeq);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0xc8, %rsp
movq %r9, %r12
movq %r8, %r13
movq %rcx, %r14
movq %rdx, 0x80(%rsp)
movq %rsi, 0x78(%rsp)
movq %rdi, 0xa0(%rsp)
movl 0x118(%rsp), %eax
movl %eax, 0x68(%rsp)
movl 0x110(%rsp), %eax
movl %eax, 0xc(%rsp)
movl 0x108(%rsp), %eax
movl %eax, 0x5c(%rsp)
movq 0x100(%rsp), %rbp
movq 0x128(%rsp), %rax
movq 0x8(%rax), %rcx
movq (%rcx), %rdx
movq %rdx, 0xa8(%rsp)
movl 0x28(%rax), %edx
movl %edx, 0x60(%rsp)
movq 0x30(%rax), %rbx
movl 0x38(%rax), %eax
movl %eax, 0x6c(%rsp)
movl 0x8(%rcx), %eax
movl %eax, 0x64(%rsp)
movq %r14, %rdi
callq 0x236a3
movq %rax, %r15
movq %rbp, 0x70(%rsp)
movq 0x10(%rbp), %rax
movq %rax, 0x98(%rsp)
movq 0x10(%r13), %rax
movq %rax, 0x38(%rsp)
movl 0x10(%r14), %ebp
movl 0x18(%r15), %eax
movl %eax, (%rsp)
testq %rbx, %rbx
je 0x10c40
movq 0x8(%r13), %rsi
movq %rbx, %rdi
callq 0x2447a
jmp 0x10c42
xorl %eax, %eax
movq %rax, 0x48(%rsp)
testq %r12, %r12
je 0x10c5d
movq 0x8(%r13), %rsi
movq %r12, %rdi
callq 0x2447a
movq %rax, %rbx
jmp 0x10c5f
xorl %ebx, %ebx
movq 0x98(%rsp), %rax
subl %eax, %ebp
movl %ebp, 0x4(%rsp)
subl %eax, (%rsp)
movq 0x20(%r14), %rdi
movq %r13, %rsi
movq %rbx, %rdx
xorl %ecx, %ecx
callq 0x13107
movl %eax, 0x58(%rsp)
movq 0x28(%r15), %rdi
pushq $0x1
popq %rcx
movq %r13, 0x88(%rsp)
movq %r13, %rsi
movq %rbx, 0x90(%rsp)
movq %rbx, %rdx
callq 0x13107
movl %eax, 0x54(%rsp)
movq 0x38(%rsp), %rax
negl %eax
movq %rax, 0x38(%rsp)
xorl %ebp, %ebp
movq $0x0, 0x20(%rsp)
xorl %r8d, %r8d
xorl %r15d, %r15d
movq $0x0, 0x10(%rsp)
movq $0x0, 0x28(%rsp)
movq $0x0, 0x18(%rsp)
movq $0x0, 0x30(%rsp)
movq %r14, 0xb0(%rsp)
movq %r14, %r13
movq 0x48(%rsp), %rdi
testq %r13, %r13
je 0x10e79
movq 0x8(%r13), %rax
movq %rax, 0xc0(%rsp)
movq 0x10(%r13), %r14
movl 0x18(%r13), %r12d
subl %r14d, %r12d
movq %r13, 0xb8(%rsp)
movq 0x20(%r13), %rbx
testl %r12d, %r12d
movl $0x0, %eax
cmovlel %eax, %r12d
movq 0x38(%rsp), %rax
addl %ebx, %eax
movq %rax, 0x40(%rsp)
xorl %r13d, %r13d
cmpq %r13, %r12
je 0x10dcf
movb (%r14,%r13), %al
movb (%rbx,%r13), %cl
cmpb $0x6e, %al
sete %dl
cmpb $0x6e, %cl
sete %sil
orb %dl, %sil
cmpb $0x1, %sil
jne 0x10d6d
incl %ebp
jmp 0x10dc7
cmpb %cl, %al
jne 0x10dbf
testq %rdi, %rdi
je 0x10dc4
movq 0x40(%rsp), %rax
leal (%rax,%r13), %esi
movq 0x48(%rsp), %rdi
movl %ebp, 0x8(%rsp)
movq %r15, %rbp
movl %r8d, %r15d
callq 0x1854e
movq 0x48(%rsp), %rdi
movl %r15d, %r8d
movq %rbp, %r15
movl 0x8(%rsp), %ebp
xorl %ecx, %ecx
xorl %edx, %edx
testl %eax, %eax
sete %cl
setne %dl
movq 0x20(%rsp), %rax
addl %edx, %eax
movq %rax, 0x20(%rsp)
addl %ecx, %r15d
jmp 0x10dc7
incl %r8d
jmp 0x10dc7
incl %r15d
incq %r13
jmp 0x10d43
movq 0xc0(%rsp), %r13
testq %r13, %r13
je 0x10cfc
movq 0x20(%r13), %rdi
movq 0x88(%rsp), %rbx
movq %rbx, %rsi
movq 0x90(%rsp), %r14
movq %r14, %rdx
xorl %ecx, %ecx
movl %r8d, 0x8(%rsp)
callq 0x13107
movl %eax, 0x40(%rsp)
movq 0xb8(%rsp), %r12
movq 0x28(%r12), %rdi
movq %rbx, %rsi
movq %r14, %rdx
pushq $0x1
popq %rcx
callq 0x13107
movl 0x8(%rsp), %r8d
movl 0x10(%r13), %ecx
subl 0x18(%r12), %ecx
movq 0x30(%rsp), %rdx
addl %ecx, %edx
movq %rdx, 0x30(%rsp)
cmpl $0x1, %ecx
movq 0x18(%rsp), %rcx
sbbl $-0x1, %ecx
movq %rcx, 0x18(%rsp)
xorl %ecx, %ecx
movl 0x40(%rsp), %esi
cmpl %eax, %esi
setne %cl
movq 0x28(%rsp), %rdx
addl %esi, %edx
subl %eax, %edx
movq %rdx, 0x28(%rsp)
movq 0x10(%rsp), %rax
addl %ecx, %eax
movq %rax, 0x10(%rsp)
jmp 0x10cf7
movq 0x20(%rsp), %rax
leal (%r15,%rax), %esi
movl %esi, %edx
addl %r8d, %edx
jle 0x11112
xorl %eax, %eax
cmpl $0x1, 0x68(%rsp)
cmovnel 0x10(%rsp), %eax
addl 0x18(%rsp), %eax
addl %eax, %eax
subl %eax, %esi
movl $0x3e8, %edi            # imm = 0x3E8
movl %r8d, %ebx
callq 0x1f4b7
cmpl 0x6c(%rsp), %eax
jl 0x11112
movl %ebx, %ecx
movq 0x80(%rsp), %rax
movl 0x58(%rsp), %edx
addl %eax, %edx
movl 0x54(%rsp), %edi
addl %eax, %edi
cmpl $0x0, 0x5c(%rsp)
je 0x10ef3
movq 0x70(%rsp), %rax
movl 0x18(%rax), %eax
movl %eax, %esi
subl (%rsp), %esi
subl 0x4(%rsp), %eax
pushq $0x2d
popq %r10
movl %eax, (%rsp)
movl %esi, 0x4(%rsp)
jmp 0x10ef7
pushq $0x2b
popq %r10
movl 0xc(%rsp), %ebx
movq 0x78(%rsp), %r12
movl %r12d, %r14d
subl %edi, %r14d
subl %edx, %r12d
testl %ebx, %ebx
cmovel %edi, %r12d
cmovel %edx, %r14d
subq $0x8, %rsp
leaq 0x6c32c(%rip), %rsi     # 0x7d24a
movq 0xb0(%rsp), %r13
movq %r13, %rdi
movl %r15d, %edx
movq 0x28(%rsp), %r8
movl %ebp, %r9d
xorl %eax, %eax
pushq %r10
pushq 0x38(%rsp)
pushq 0x28(%rsp)
pushq 0x50(%rsp)
pushq 0x40(%rsp)
callq 0x6a90
addq $0x30, %rsp
cmpl $0x0, 0x60(%rsp)
je 0x10f6e
xorl %eax, %eax
testl %ebx, %ebx
setne %al
leal 0x2b(,%rax,2), %edi
movq %r13, %rsi
callq 0x6930
movq 0x70(%rsp), %rax
movq 0x8(%rax), %rbx
movl 0x18(%rax), %ebp
movq 0xb0(%rsp), %r15
movq %r15, %rdi
callq 0x23733
movl %eax, %r10d
subq $0x8, %rsp
leaq 0x6c2cd(%rip), %rsi     # 0x7d265
movq %r13, %rdi
movq %rbx, %rdx
movl %ebp, %ecx
movl 0xc(%rsp), %r8d
movl 0x8(%rsp), %r9d
xorl %eax, %eax
pushq %r10
pushq %r12
pushq %r14
pushq 0x98(%rsp)
pushq 0xc8(%rsp)
callq 0x6a90
addq $0x30, %rsp
leaq 0x6c2b2(%rip), %rbx     # 0x7d282
movq %r15, %r14
movq %r13, %r12
movq 0x88(%rsp), %r13
movq 0x80(%rsp), %rbp
testq %r14, %r14
je 0x11006
movq 0x18(%r14), %rdx
subq 0x10(%r14), %rdx
movq %r12, %rdi
movq %rbx, %rsi
xorl %eax, %eax
callq 0x6a90
movq 0x8(%r14), %r14
jmp 0x10fe6
pushq $0x9
popq %rdi
movq %r12, %rsi
callq 0x6930
leaq 0x6c26a(%rip), %rbx     # 0x7d282
movq %r15, %r14
testq %r14, %r14
je 0x1103f
movq 0x10(%r14), %rdx
subq 0x98(%rsp), %rdx
movq %r12, %rdi
movq %rbx, %rsi
xorl %eax, %eax
callq 0x6a90
movq 0x8(%r14), %r14
jmp 0x1101b
pushq $0x9
popq %rdi
movq %r12, %rsi
callq 0x6930
leaq 0x6c236(%rip), %rbx     # 0x7d287
movq %r15, %r14
testq %r14, %r14
je 0x11085
movq 0x20(%r14), %rdi
movq %r13, %rsi
movq 0x90(%rsp), %rdx
xorl %ecx, %ecx
callq 0x13107
leal (%rax,%rbp), %edx
movq %r12, %rdi
movq %rbx, %rsi
xorl %eax, %eax
callq 0x6a90
movq 0x8(%r14), %r14
jmp 0x11054
cmpl $0x0, 0x64(%rsp)
je 0x110fb
pushq $0x9
popq %rdi
movq %r12, %rsi
callq 0x6930
pushq $0x2c
popq %rbx
movq %r15, %r14
testq %r14, %r14
je 0x110c5
movq 0x10(%r14), %rsi
movq 0x18(%r14), %rdx
subq %rsi, %rdx
movq %r12, %rdi
callq 0x1ed3f
movl %ebx, %edi
movq %r12, %rsi
callq 0x6930
movq 0x8(%r14), %r14
jmp 0x1109d
pushq $0x9
popq %rdi
movq %r12, %rsi
callq 0x6930
pushq $0x2c
popq %rbx
testq %r15, %r15
je 0x110fb
movq 0x20(%r15), %rsi
movq 0x28(%r15), %rdx
subq %rsi, %rdx
movq %r12, %rdi
callq 0x1ed3f
movl %ebx, %edi
movq %r12, %rsi
callq 0x6930
movq 0x8(%r15), %r15
jmp 0x110d3
pushq $0xa
popq %rdi
movq %r12, %rsi
callq 0x6930
movq %r12, %rdi
callq 0x6e00
testl %eax, %eax
jne 0x11124
addq $0xc8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
leaq 0x76252(%rip), %rdi     # 0x8737d
callq 0x6590
leaq 0x6c154(%rip), %rdi     # 0x7d28b
xorl %eax, %eax
addq $0xc8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x223fb