// File: /workspace/github_cpp_makefile_star2_O2/ncbi[P]amr/gff.cpp
// Function: GFF_sp::Locus::Locus(unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>> const&, unsigned long, unsigned long, bool, bool, unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
Locus::Locus (size_t lineNum_arg,
              const string &contig_arg,
    				  size_t start_arg,
    				  size_t stop_arg,
    				  bool strand_arg,
              bool partial_arg,
              size_t crossOriginSeqLen_arg,
              string gene_arg,
              string product_arg)
: lineNum (lineNum_arg)
, contig (contig_arg)
, start (start_arg)
, stop (stop_arg)
, strand (strand_arg)
, partial (partial_arg)
, contigLen (crossOriginSeqLen_arg)
, crossOrigin (bool (crossOriginSeqLen_arg))
, gene (gene_arg)
, product (product_arg)
{ 
//QC_ASSERT (lineNum >= 1);
  trim (contig);
	if (contig. empty ())
		throw runtime_error ("Empty contig name");
	if (crossOrigin)
	{
		swap (start, stop);
		start--;
		stop++;
	  QC_ASSERT (contigLen);
		QC_ASSERT (stop <= contigLen);
	}
  QC_ASSERT (start < stop); 
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x128, %rsp            # imm = 0x128
movl %r9d, %ebp
movq %r8, %r14
movq %rcx, %r15
movq %rdi, %r12
movq 0x168(%rsp), %rbx
movb 0x160(%rsp), %r13b
movq %rsi, (%rdi)
addq $0x8, %rdi
movq %rdi, 0x8(%rsp)
movq %rdx, %rsi
callq 0xb7b0
movq %r15, 0x28(%r12)
movq %r14, 0x30(%r12)
movb %bpl, 0x38(%r12)
movb %r13b, 0x39(%r12)
movq %rbx, 0x40(%r12)
testq %rbx, %rbx
setne 0x48(%r12)
leaq 0x50(%r12), %r14
movq %r14, %rdi
movq 0x170(%rsp), %rsi
callq 0xb7b0
movq 0x178(%rsp), %rsi
leaq 0x70(%r12), %r15
movq %r15, %rdi
callq 0xb7b0
movq 0x8(%rsp), %rdi
callq 0x3c32f
cmpq $0x0, 0x10(%r12)
je 0x4be9c
cmpb $0x0, 0x48(%r12)
je 0x4be76
movdqu 0x28(%r12), %xmm0
paddq 0x1315e(%rip), %xmm0    # 0x5eec0
movdqa %xmm0, 0x110(%rsp)
pshufd $0x4e, %xmm0, %xmm0     # xmm0 = xmm0[2,3,0,1]
movdqu %xmm0, 0x28(%r12)
callq 0xb060
andl $0x0, (%rax)
movq 0x40(%r12), %rcx
testq %rcx, %rcx
je 0x4bf9e
movdqa 0x110(%rsp), %xmm0
movq %xmm0, %rdx
cmpq %rcx, %rdx
jbe 0x4be7b
callq 0xb6c0
testl %eax, %eax
jne 0x4c070
leaq 0x1312a(%rip), %rsi     # 0x5eee2
leaq 0x70(%rsp), %rdi
leaq 0x7(%rsp), %rdx
callq 0x1b7b6
leaq 0x50(%rsp), %rdi
pushq $0x50
popq %rsi
callq 0x1caa3
leaq 0x90(%rsp), %rdi
leaq 0x70(%rsp), %rsi
leaq 0x50(%rsp), %rdx
callq 0x1ca3c
leaq 0xddf1(%rip), %rdx      # 0x59be3
leaq 0xb0(%rsp), %rdi
leaq 0x90(%rsp), %rsi
callq 0x1b92d
leaq 0x130e5(%rip), %rsi     # 0x5eef3
leaq 0x10(%rsp), %rdi
leaq 0x6(%rsp), %rdx
callq 0x1b7b6
leaq 0xfb1a(%rip), %rdx      # 0x5b93e
leaq 0x30(%rsp), %rdi
leaq 0x10(%rsp), %rsi
callq 0x1b92d
leaq 0xd0(%rsp), %rdi
leaq 0xb0(%rsp), %rsi
leaq 0x30(%rsp), %rdx
callq 0x1ca3c
leaq 0x13100(%rip), %rdx     # 0x5ef54
leaq 0xf0(%rsp), %rdi
leaq 0xd0(%rsp), %rsi
callq 0x1b92d
leaq 0xf0(%rsp), %rdi
callq 0x224fc
callq 0xb060
andl $0x0, (%rax)
movq 0x28(%r12), %rax
cmpq 0x30(%r12), %rax
jae 0x4becc
addq $0x128, %rsp            # imm = 0x128
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
pushq $0x10
popq %rdi
callq 0xb300
movq %rax, %r13
leaq 0x13022(%rip), %rsi     # 0x5eed0
movq %rax, %rdi
callq 0xb260
movq 0x3812b(%rip), %rsi     # 0x83fe8
movq 0x3809c(%rip), %rdx     # 0x83f60
movq %r13, %rdi
callq 0xb9d0
callq 0xb6c0
testl %eax, %eax
jne 0x4c070
leaq 0x13002(%rip), %rsi     # 0x5eee2
leaq 0x70(%rsp), %rdi
leaq 0x7(%rsp), %rdx
callq 0x1b7b6
leaq 0x50(%rsp), %rdi
pushq $0x52
popq %rsi
callq 0x1caa3
leaq 0x90(%rsp), %rdi
leaq 0x70(%rsp), %rsi
leaq 0x50(%rsp), %rdx
callq 0x1ca3c
leaq 0xdcc9(%rip), %rdx      # 0x59be3
leaq 0xb0(%rsp), %rdi
leaq 0x90(%rsp), %rsi
callq 0x1b92d
leaq 0x12fbd(%rip), %rsi     # 0x5eef3
leaq 0x10(%rsp), %rdi
leaq 0x6(%rsp), %rdx
callq 0x1b7b6
leaq 0xf9f2(%rip), %rdx      # 0x5b93e
leaq 0x30(%rsp), %rdi
leaq 0x10(%rsp), %rsi
callq 0x1b92d
leaq 0xd0(%rsp), %rdi
leaq 0xb0(%rsp), %rsi
leaq 0x30(%rsp), %rdx
callq 0x1ca3c
leaq 0x12fea(%rip), %rdx     # 0x5ef66
leaq 0xf0(%rsp), %rdi
leaq 0xd0(%rsp), %rsi
callq 0x1b92d
leaq 0xf0(%rsp), %rdi
callq 0x224fc
callq 0xb6c0
testl %eax, %eax
jne 0x4c070
leaq 0x12f30(%rip), %rsi     # 0x5eee2
leaq 0x70(%rsp), %rdi
leaq 0x7(%rsp), %rdx
callq 0x1b7b6
leaq 0x50(%rsp), %rdi
pushq $0x4f
popq %rsi
callq 0x1caa3
leaq 0x90(%rsp), %rdi
leaq 0x70(%rsp), %rsi
leaq 0x50(%rsp), %rdx
callq 0x1ca3c
leaq 0xdbf7(%rip), %rdx      # 0x59be3
leaq 0xb0(%rsp), %rdi
leaq 0x90(%rsp), %rsi
callq 0x1b92d
leaq 0x12eeb(%rip), %rsi     # 0x5eef3
leaq 0x10(%rsp), %rdi
leaq 0x6(%rsp), %rdx
callq 0x1b7b6
leaq 0xf920(%rip), %rdx      # 0x5b93e
leaq 0x30(%rsp), %rdi
leaq 0x10(%rsp), %rsi
callq 0x1b92d
leaq 0xd0(%rsp), %rdi
leaq 0xb0(%rsp), %rsi
leaq 0x30(%rsp), %rdx
callq 0x1ca3c
leaq 0x12f0e(%rip), %rdx     # 0x5ef5c
leaq 0xf0(%rsp), %rdi
leaq 0xd0(%rsp), %rsi
callq 0x1b92d
leaq 0xf0(%rsp), %rdi
callq 0x224fc
pushq $0x1
popq %rdi
callq 0xb6d0
jmp 0x4c080
jmp 0x4c092
jmp 0x4c080
jmp 0x4c092
movq %rax, %r12
leaq 0xf0(%rsp), %rdi
callq 0xbb68
jmp 0x4c095
movq %rax, %r12
leaq 0xd0(%rsp), %rdi
callq 0xbb68
jmp 0x4c0ab
jmp 0x4c0a8
jmp 0x4c0a8
movq %rax, %r12
leaq 0x30(%rsp), %rdi
callq 0xbb68
jmp 0x4c0be
jmp 0x4c0bb
jmp 0x4c0bb
movq %rax, %r12
leaq 0x10(%rsp), %rdi
callq 0xbb68
jmp 0x4c0d1
jmp 0x4c0ce
jmp 0x4c0ce
movq %rax, %r12
leaq 0xb0(%rsp), %rdi
callq 0xbb68
jmp 0x4c0e7
jmp 0x4c0e4
jmp 0x4c0e4
movq %rax, %r12
leaq 0x90(%rsp), %rdi
callq 0xbb68
jmp 0x4c0fd
jmp 0x4c0fa
jmp 0x4c0fa
movq %rax, %r12
leaq 0x50(%rsp), %rdi
callq 0xbb68
jmp 0x4c110
jmp 0x4c10d
jmp 0x4c10d
movq %rax, %r12
leaq 0x70(%rsp), %rdi
callq 0xbb68
jmp 0x4c13c
jmp 0x4c139
jmp 0x4c139
jmp 0x4c139
movq %rax, %r12
movq %r13, %rdi
callq 0xb470
jmp 0x4c13c
movq %rax, %r12
jmp 0x4c144
movq %rax, %r12
jmp 0x4c14c
movq %rax, %r12
movq %r15, %rdi
callq 0xbb68
movq %r14, %rdi
callq 0xbb68
movq 0x8(%rsp), %rdi
callq 0xbb68
movq %r12, %rdi
callq 0xba30