LLM4Binary/decompile-bench-makefile huggingface dataset:
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_16.c
// Function: gt_intset_16_add
void gt_intset_16_add(GtIntset *intset, GtUword elem)
{
  GtIntset16 *intset_16 = gt_intset_16_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(members->nextfree < members->num_of_elems);
  gt_assert(elem <= members->maxelement);
  gt_assert(members->previouselem == ULONG_MAX || members->previouselem < elem);
  while (elem >= GT_SECTIONMINELEM(members->currentsectionnum + 1)) {
    gt_assert(members->currentsectionnum < members->numofsections);
    sectionstart[members->currentsectionnum + 1] = members->nextfree;
    members->currentsectionnum++;
  }
  gt_assert(GT_SECTIONMINELEM(members->currentsectionnum) <= elem &&
            elem < GT_SECTIONMINELEM(members->currentsectionnum+1) &&
            GT_ELEM2SECTION_M(elem) == members->currentsectionnum);
  intset_16->elements[members->nextfree++] = (uint16_t) elem;
  members->previouselem = elem;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x2ff40a
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movq 0x20(%rdx), %rsi
cmpq 0x28(%rdx), %rsi
jae 0x2ffbfb
cmpq %rbx, 0x18(%rdx)
jb 0x2ffc00
movq 0x38(%rdx), %rcx
cmpq $-0x1, %rcx
setne %dil
cmpq %rbx, %rcx
setae %cl
testb %cl, %dil
jne 0x2ffc05
movq 0x8(%rdx), %rcx
movq 0x10(%rdx), %rdi
leaq 0x1(%rdi), %r8
movq %r8, %r9
shlq %cl, %r9
cmpq %rbx, %r9
ja 0x2ffbc4
movq (%rdx), %r9
cmpq 0x30(%rdx), %rdi
jae 0x2ffbf6
movq %rsi, (%r9,%r8,8)
movq 0x8(%rdx), %rcx
movq 0x10(%rdx), %r8
leaq 0x1(%r8), %rdi
movq %rdi, 0x10(%rdx)
addq $0x2, %r8
movq %r8, %r10
shlq %cl, %r10
cmpq %rbx, %r10
jbe 0x2ffb9b
movq %rdi, %r9
shlq %cl, %r9
movq %rbx, %r8
shrq %cl, %r8
cmpq %rbx, %r9
ja 0x2ffc0a
cmpq %rdi, %r8
jne 0x2ffc0a
movq 0x10(%rax), %rax
leaq 0x1(%rsi), %rcx
movq %rcx, 0x20(%rdx)
movw %bx, (%rax,%rsi,2)
movq %rbx, 0x38(%rdx)
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c1c4
callq 0x8c152
callq 0x8c236
callq 0x8c18b
callq 0x8c1fd
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_16.c
// Function: gt_intset_16_get
GtUword gt_intset_16_get(GtIntset *intset, GtUword idx)
{
  GtUword quotient;
  GtIntset16 *intset_16 = gt_intset_16_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(idx < members->nextfree);

  quotient = gt_intset_16_binarysearch_sec_idx_largest_leq(
                                      sectionstart,
                                      sectionstart + members->numofsections - 1,
                                      idx);
  return (quotient << members->logsectionsize) +
         intset_16->elements[idx];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x2ff40a
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rcx
cmpq %rbx, 0x20(%rcx)
jbe 0x2ffcc2
movq (%rcx), %rsi
movq 0x30(%rcx), %rdx
leaq (%rsi,%rdx,8), %rdi
addq $-0x8, %rdi
xorl %edx, %edx
cmpq %rbx, (%rsi)
cmovbeq %rsi, %rdx
cmpq %rdi, %rsi
jae 0x2ffc82
movq %rsi, %r8
movq %rdi, %r9
subq %r8, %r9
sarq $0x4, %r9
cmpq %rbx, (%r8,%r9,8)
jb 0x2ffc71
leaq (%r8,%r9,8), %rdi
addq $-0x8, %rdi
jmp 0x2ffc7d
leaq (%r8,%r9,8), %rdx
leaq (%r8,%r9,8), %r8
addq $0x8, %r8
cmpq %rdi, %r8
jb 0x2ffc57
testq %rdx, %rdx
je 0x2ffcc7
movq %rdx, %rdi
subq %rsi, %rdi
addq $-0x8, %rdi
addq $0x8, %rdx
addq $0x8, %rdi
leaq 0x8(%rdx), %rsi
cmpq %rbx, (%rdx)
movq %rsi, %rdx
jbe 0x2ffc95
sarq $0x3, %rdi
movb 0x8(%rcx), %cl
shlq %cl, %rdi
movq 0x10(%rax), %rax
movzwl (%rax,%rbx,2), %eax
addq %rdi, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c26f
callq 0x8c2a8
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_16.c
// Function: gt_intset_16_is_member
bool gt_intset_16_is_member(GtIntset *intset, GtUword elem)
{
  GtIntset16 *intset_16 = gt_intset_16_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  if (elem <= members->maxelement)
  {
    const GtUword sectionnum = GT_ELEM2SECTION_M(elem);

    if (sectionstart[sectionnum] < sectionstart[sectionnum+1]) {
      return gt_intset_16_binarysearch_is_member(
                           intset_16->elements + sectionstart[sectionnum],
                           intset_16->elements + sectionstart[sectionnum+1] - 1,
                           (uint64_t) elem);
    }
  }
  return false;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x2ff40a
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
cmpq %rbx, 0x18(%rdx)
jb 0x2ffd64
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rcx
movq 0x8(%rdx,%rsi,8), %rdx
cmpq %rdx, %rcx
jae 0x2ffd64
movq 0x10(%rax), %rax
leaq (%rax,%rcx,2), %rcx
leaq (%rax,%rdx,2), %rax
addq $-0x2, %rax
cmpq %rax, %rcx
ja 0x2ffd64
movq %rax, %rdx
subq %rcx, %rdx
sarq $0x2, %rdx
leaq (%rcx,%rdx,2), %rdx
cmpw %bx, (%rdx)
jbe 0x2ffd59
addq $-0x2, %rdx
movq %rdx, %rax
jmp 0x2ffd38
jae 0x2ffd6e
addq $0x2, %rdx
movq %rdx, %rcx
jmp 0x2ffd38
xorl %eax, %eax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
movb $0x1, %al
jmp 0x2ffd66
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_16.c
// Function: gt_intset_16_get_idx_smallest_geq
GtUword gt_intset_16_get_idx_smallest_geq(GtIntset *intset, GtUword value)
{
  GtIntset16 *intset_16 = gt_intset_16_cast(intset);
  GtIntsetMembers *members = intset->members;

  GtUword sectionnum = GT_ELEM2SECTION_M(value);

  if (value > members->previouselem)
    return members->num_of_elems;

  gt_assert(value <= members->maxelement);

  if (members->sectionstart[sectionnum] < members->sectionstart[sectionnum+1]) {
    return members->sectionstart[sectionnum] +
           gt_intset_16_binarysearch_idx_sm_geq(
                  intset_16->elements + members->sectionstart[sectionnum],
                  intset_16->elements + members->sectionstart[sectionnum+1] - 1,
                  (uint16_t) value);
  }
  return members->sectionstart[sectionnum];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x2ff40a
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
cmpq %rbx, 0x38(%rdx)
jae 0x2ffda8
movq 0x28(%rdx), %rax
jmp 0x2ffe2e
cmpq %rbx, 0x18(%rdx)
jb 0x2ffe36
movq %rax, %rcx
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rax
movq 0x8(%rdx,%rsi,8), %rdx
cmpq %rdx, %rax
jae 0x2ffe2e
movq 0x10(%rcx), %rsi
leaq (%rsi,%rax,2), %rcx
leaq (%rsi,%rdx,2), %rdx
addq $-0x2, %rdx
cmpq %rdx, %rcx
ja 0x2ffe3b
cmpw %bx, (%rcx)
jae 0x2ffdf3
cmpw %bx, (%rdx)
jae 0x2ffdf7
subq %rcx, %rdx
sarq %rdx
incq %rdx
movq %rdx, %rsi
jmp 0x2ffe2b
xorl %esi, %esi
jmp 0x2ffe2b
movq %rcx, %rsi
cmpq %rdx, %rcx
jae 0x2ffe25
movq %rcx, %rsi
movq %rdx, %rdi
subq %rsi, %rdi
sarq $0x2, %rdi
cmpw %bx, (%rsi,%rdi,2)
jb 0x2ffe18
leaq (%rsi,%rdi,2), %rdx
jmp 0x2ffe20
leaq (%rsi,%rdi,2), %rsi
addq $0x2, %rsi
cmpq %rdx, %rsi
jb 0x2ffe02
subq %rcx, %rsi
sarq %rsi
addq %rsi, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c31a
callq 0x8c2e1
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_16.c
// Function: gt_intset_16_get_test
static GtUword gt_intset_16_get_test(GtIntset *intset, GtUword idx)
{
  GtIntset16 *intset_16 = gt_intset_16_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(idx < members->nextfree);

  return (gt_intset_16_sec_idx_largest_leq(sectionstart, idx) <<
         members->logsectionsize) + intset_16->elements[idx];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x2ff40a
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rcx
cmpq %rbx, 0x20(%rcx)
jbe 0x3004d9
movq (%rcx), %rsi
movq $-0x2, %rdx
movq %rdx, %rdi
incq %rdx
cmpq %rbx, 0x10(%rsi,%rdi,8)
jbe 0x3004b3
movb 0x8(%rcx), %cl
shlq %cl, %rdx
movq 0x10(%rax), %rax
movzwl (%rax,%rbx,2), %eax
addq %rdx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c38c
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_16.c
// Function: gt_intset_16_get_idx_smallest_geq_test
static GtUword gt_intset_16_get_idx_smallest_geq_test(GtIntset *intset,
                                                     GtUword value)
{
  GtIntset16 *intset_16 = gt_intset_16_cast(intset);
  GtIntsetMembers *members = intset->members;

  GtUword sectionnum = GT_ELEM2SECTION_M(value);

  if (value > members->previouselem)
    return members->num_of_elems;

  gt_assert(value <= members->maxelement);
  if (members->sectionstart[sectionnum] < members->sectionstart[sectionnum+1]) {
    return members->sectionstart[sectionnum] +
           gt_intset_16_idx_sm_geq(
                  intset_16->elements + members->sectionstart[sectionnum],
                  intset_16->elements + members->sectionstart[sectionnum+1] - 1,
                  (uint16_t) value);
  }
  return members->sectionstart[sectionnum];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x2ff40a
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
cmpq %rbx, 0x38(%rdx)
jae 0x300511
movq 0x28(%rdx), %rax
jmp 0x300570
cmpq %rbx, 0x18(%rdx)
jb 0x300578
movq %rax, %rcx
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rax
movq 0x8(%rdx,%rsi,8), %rsi
cmpq %rsi, %rax
jae 0x300570
movq 0x10(%rcx), %rcx
cmpw %bx, (%rcx,%rax,2)
jbe 0x300539
xorl %ecx, %ecx
jmp 0x30056d
leaq (%rcx,%rax,2), %rdx
leaq (%rcx,%rsi,2), %rcx
addq $-0x2, %rcx
cmpw %bx, (%rcx)
jae 0x300555
subq %rdx, %rcx
sarq %rcx
incq %rcx
jmp 0x30056d
movq $-0x2, %rcx
movq %rcx, %rsi
addq $0x2, %rcx
cmpw %bx, 0x2(%rdx,%rsi)
jb 0x30055c
sarq %rcx
addq %rcx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c3c5
nopl (%rax)
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_new
GtIntset* gt_intset_32_new(GtUword maxelement, GtUword num_of_elems)
{
  GtIntset *intset;
  GtIntset32 *intset_32;
  GtIntsetMembers *members;
  GtUword idx;

  gt_assert(num_of_elems != 0);

  intset = gt_intset_create(gt_intset_32_class());
  intset_32 = gt_intset_32_cast(intset);
  members = intset->members;

  members->currentsectionnum = 0;
  members->maxelement = maxelement;
  members->nextfree = 0;
  members->num_of_elems = num_of_elems;
  members->previouselem = ULONG_MAX;
  members->refcount = 0;

  members->logsectionsize = GT_BITS_FOR_TYPE(uint32_t);
  members->numofsections = GT_ELEM2SECTION_M(maxelement) + 1;

  intset_32->elements =
    gt_malloc(sizeof (*intset_32->elements) * num_of_elems);

  members->sectionstart = gt_malloc(sizeof (*members->sectionstart) *
                                    (members->numofsections + 1));

  members->sectionstart[0] = 0;
  for (idx = (GtUword) 1; idx <= members->numofsections; idx++) {
    members->sectionstart[idx] = num_of_elems;
  }
  return intset;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
testq %rsi, %rsi
je 0x30065d
movq %rsi, %rbx
movq %rdi, %r15
callq 0x300662
movq %rax, %rdi
callq 0x156688
movq %rax, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq %rax, %r12
movq 0x8(%r14), %r13
xorl %ebp, %ebp
movq %rbp, 0x10(%r13)
movq %r15, 0x18(%r13)
movq %rbp, 0x20(%r13)
movq %rbx, 0x28(%r13)
movq $-0x1, 0x38(%r13)
movq %rbp, 0x40(%r13)
movq $0x20, 0x8(%r13)
shrq $0x20, %r15
incq %r15
movq %r15, 0x30(%r13)
leaq (,%rbx,4), %rdi
leaq 0xde0c6(%rip), %r15     # 0x3de6c7
movq %r15, %rsi
movl $0x4c, %edx
callq 0x104226
movq %rax, 0x10(%r12)
movq 0x30(%r13), %rax
leaq 0x8(,%rax,8), %rdi
movq %r15, %rsi
movl $0x4f, %edx
callq 0x104226
movq %rax, (%r13)
movq %rbp, (%rax)
cmpq %rbp, 0x30(%r13)
je 0x30064b
movl $0x1, %ecx
movq %rbx, (%rax,%rcx,8)
incq %rcx
cmpq 0x30(%r13), %rcx
jbe 0x30063e
movq %r14, %rax
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0x8c3fe
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_class
const GtIntsetClass* gt_intset_32_class(void)
{
  static const GtIntsetClass *this_c = NULL;
  if (this_c == NULL) {
    this_c = gt_intset_class_new(sizeof (GtIntset32),
                                 gt_intset_32_add,
                                 gt_intset_32_file_is_type,
                                 gt_intset_32_get,
                                 gt_intset_32_io,
                                 gt_intset_32_get_idx_smallest_geq,
                                 gt_intset_32_is_member,
                                 gt_intset_32_size_of_rep,
                                 gt_intset_32_size,
                                 gt_intset_32_size_of_struct,
                                 gt_intset_32_write,
                                 gt_intset_32_delete);
  }
  return this_c;
}

// Assembly:
movq 0x1be987(%rip), %rax    # 0x4beff0
testq %rax, %rax
je 0x30066f
retq
pushq %r15
pushq %r14
pushq %rbx
leaq 0x254(%rip), %rax       # 0x3008cf
leaq 0x6b4(%rip), %r10       # 0x300d36
leaq 0xa1f(%rip), %r11       # 0x3010a8
leaq 0x895(%rip), %rbx       # 0x300f25
leaq 0xa00(%rip), %r14       # 0x301097
leaq 0x8a5(%rip), %r15       # 0x300f43
leaq 0x6e6(%rip), %rsi       # 0x300d8b
leaq 0xa02(%rip), %rdx       # 0x3010ae
leaq 0x7b6(%rip), %rcx       # 0x300e69
leaq 0x246(%rip), %r8        # 0x300900
leaq 0x909(%rip), %r9        # 0x300fca
movl $0x18, %edi
pushq %rax
pushq %r10
pushq %r11
pushq %rbx
pushq %r14
pushq %r15
callq 0x15686c
addq $0x30, %rsp
movq %rax, 0x1be910(%rip)    # 0x4beff0
popq %rbx
popq %r14
popq %r15
retq
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_write
GtIntset *gt_intset_32_write(GtIntset *intset, FILE *fp, GtError *err)
{
  gt_assert(intset != NULL);
  gt_assert(fp != NULL);
  gt_error_check(err);
  return gt_intset_32_io(intset, fp, err);
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
testq %rdi, %rdi
je 0x300d7c
movq %rsi, %rbx
testq %rsi, %rsi
je 0x300d81
movq %rdx, %r14
movq %rdi, %r15
testq %rdx, %rdx
je 0x300d6a
movq %r14, %rdi
callq 0xfcc32
testb %al, %al
jne 0x300d86
movq %r15, %rdi
movq %rbx, %rsi
movq %r14, %rdx
jmp 0x300d72
movq %r15, %rdi
movq %rbx, %rsi
xorl %edx, %edx
popq %rbx
popq %r14
popq %r15
jmp 0x300900
callq 0x8c5c4
callq 0x8c58b
callq 0x8c552
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_add
void gt_intset_32_add(GtIntset *intset, GtUword elem)
{
  GtIntset32 *intset_32 = gt_intset_32_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(members->nextfree < members->num_of_elems);
  gt_assert(elem <= members->maxelement);
  gt_assert(members->previouselem == ULONG_MAX || members->previouselem < elem);
  while (elem >= GT_SECTIONMINELEM(members->currentsectionnum + 1)) {
    gt_assert(members->currentsectionnum < members->numofsections);
    sectionstart[members->currentsectionnum + 1] = members->nextfree;
    members->currentsectionnum++;
  }
  gt_assert(GT_SECTIONMINELEM(members->currentsectionnum) <= elem &&
            elem < GT_SECTIONMINELEM(members->currentsectionnum+1) &&
            GT_ELEM2SECTION_M(elem) == members->currentsectionnum);
  intset_32->elements[members->nextfree++] = (uint32_t) elem;
  members->previouselem = elem;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movq 0x20(%rdx), %rsi
cmpq 0x28(%rdx), %rsi
jae 0x300e55
cmpq %rbx, 0x18(%rdx)
jb 0x300e5a
movq 0x38(%rdx), %rcx
cmpq $-0x1, %rcx
setne %dil
cmpq %rbx, %rcx
setae %cl
testb %cl, %dil
jne 0x300e5f
movq 0x8(%rdx), %rcx
movq 0x10(%rdx), %rdi
leaq 0x1(%rdi), %r8
movq %r8, %r9
shlq %cl, %r9
cmpq %rbx, %r9
ja 0x300e1f
movq (%rdx), %r9
cmpq 0x30(%rdx), %rdi
jae 0x300e50
movq %rsi, (%r9,%r8,8)
movq 0x8(%rdx), %rcx
movq 0x10(%rdx), %r8
leaq 0x1(%r8), %rdi
movq %rdi, 0x10(%rdx)
addq $0x2, %r8
movq %r8, %r10
shlq %cl, %r10
cmpq %rbx, %r10
jbe 0x300df6
movq %rdi, %r9
shlq %cl, %r9
movq %rbx, %r8
shrq %cl, %r8
cmpq %rbx, %r9
ja 0x300e64
cmpq %rdi, %r8
jne 0x300e64
movq 0x10(%rax), %rax
leaq 0x1(%rsi), %rcx
movq %rcx, 0x20(%rdx)
movl %ebx, (%rax,%rsi,4)
movq %rbx, 0x38(%rdx)
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c66f
callq 0x8c5fd
callq 0x8c6e1
callq 0x8c636
callq 0x8c6a8
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_get
GtUword gt_intset_32_get(GtIntset *intset, GtUword idx)
{
  GtUword quotient;
  GtIntset32 *intset_32 = gt_intset_32_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(idx < members->nextfree);

  quotient = gt_intset_32_binarysearch_sec_idx_largest_leq(
                                      sectionstart,
                                      sectionstart + members->numofsections - 1,
                                      idx);
  return (quotient << members->logsectionsize) +
         intset_32->elements[idx];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rcx
cmpq %rbx, 0x20(%rcx)
jbe 0x300f1b
movq (%rcx), %rsi
movq 0x30(%rcx), %rdx
leaq (%rsi,%rdx,8), %rdi
addq $-0x8, %rdi
xorl %edx, %edx
cmpq %rbx, (%rsi)
cmovbeq %rsi, %rdx
cmpq %rdi, %rsi
jae 0x300edc
movq %rsi, %r8
movq %rdi, %r9
subq %r8, %r9
sarq $0x4, %r9
cmpq %rbx, (%r8,%r9,8)
jb 0x300ecb
leaq (%r8,%r9,8), %rdi
addq $-0x8, %rdi
jmp 0x300ed7
leaq (%r8,%r9,8), %rdx
leaq (%r8,%r9,8), %r8
addq $0x8, %r8
cmpq %rdi, %r8
jb 0x300eb1
testq %rdx, %rdx
je 0x300f20
movq %rdx, %rdi
subq %rsi, %rdi
addq $-0x8, %rdi
addq $0x8, %rdx
addq $0x8, %rdi
leaq 0x8(%rdx), %rsi
cmpq %rbx, (%rdx)
movq %rsi, %rdx
jbe 0x300eef
sarq $0x3, %rdi
movb 0x8(%rcx), %cl
shlq %cl, %rdi
movq 0x10(%rax), %rax
movl (%rax,%rbx,4), %eax
addq %rdi, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c71a
callq 0x8c753
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_is_member
bool gt_intset_32_is_member(GtIntset *intset, GtUword elem)
{
  GtIntset32 *intset_32 = gt_intset_32_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  if (elem <= members->maxelement)
  {
    const GtUword sectionnum = GT_ELEM2SECTION_M(elem);

    if (sectionstart[sectionnum] < sectionstart[sectionnum+1]) {
      return gt_intset_32_binarysearch_is_member(
                           intset_32->elements + sectionstart[sectionnum],
                           intset_32->elements + sectionstart[sectionnum+1] - 1,
                           (uint64_t) elem);
    }
  }
  return false;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
cmpq %rbx, 0x18(%rdx)
jb 0x300fbc
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rcx
movq 0x8(%rdx,%rsi,8), %rdx
cmpq %rdx, %rcx
jae 0x300fbc
movq 0x10(%rax), %rax
leaq (%rax,%rcx,4), %rcx
leaq (%rax,%rdx,4), %rax
addq $-0x4, %rax
cmpq %rax, %rcx
ja 0x300fbc
movq %rax, %rdx
subq %rcx, %rdx
sarq $0x3, %rdx
leaq (%rcx,%rdx,4), %rdx
cmpl %ebx, (%rdx)
jbe 0x300fb1
addq $-0x4, %rdx
movq %rdx, %rax
jmp 0x300f91
jae 0x300fc6
addq $0x4, %rdx
movq %rdx, %rcx
jmp 0x300f91
xorl %eax, %eax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
movb $0x1, %al
jmp 0x300fbe
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_get_idx_smallest_geq
GtUword gt_intset_32_get_idx_smallest_geq(GtIntset *intset, GtUword value)
{
  GtIntset32 *intset_32 = gt_intset_32_cast(intset);
  GtIntsetMembers *members = intset->members;

  GtUword sectionnum = GT_ELEM2SECTION_M(value);

  if (value > members->previouselem)
    return members->num_of_elems;

  gt_assert(value <= members->maxelement);

  if (members->sectionstart[sectionnum] < members->sectionstart[sectionnum+1]) {
    return members->sectionstart[sectionnum] +
           gt_intset_32_binarysearch_idx_sm_geq(
                  intset_32->elements + members->sectionstart[sectionnum],
                  intset_32->elements + members->sectionstart[sectionnum+1] - 1,
                  (uint32_t) value);
  }
  return members->sectionstart[sectionnum];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
cmpq %rbx, 0x38(%rdx)
jae 0x301000
movq 0x28(%rdx), %rax
jmp 0x301085
cmpq %rbx, 0x18(%rdx)
jb 0x30108d
movq %rax, %rcx
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rax
movq 0x8(%rdx,%rsi,8), %rdx
cmpq %rdx, %rax
jae 0x301085
movq 0x10(%rcx), %rsi
leaq (%rsi,%rax,4), %rcx
leaq (%rsi,%rdx,4), %rdx
addq $-0x4, %rdx
cmpq %rdx, %rcx
ja 0x301092
cmpl %ebx, (%rcx)
jae 0x30104a
cmpl %ebx, (%rdx)
jae 0x30104e
subq %rcx, %rdx
sarq $0x2, %rdx
incq %rdx
movq %rdx, %rsi
jmp 0x301082
xorl %esi, %esi
jmp 0x301082
movq %rcx, %rsi
cmpq %rdx, %rcx
jae 0x30107b
movq %rcx, %rsi
movq %rdx, %rdi
subq %rsi, %rdi
sarq $0x3, %rdi
cmpl %ebx, (%rsi,%rdi,4)
jb 0x30106e
leaq (%rsi,%rdi,4), %rdx
jmp 0x301076
leaq (%rsi,%rdi,4), %rsi
addq $0x4, %rsi
cmpq %rdx, %rsi
jb 0x301059
subq %rcx, %rsi
sarq $0x2, %rsi
addq %rsi, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c7c5
callq 0x8c78c
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_get_test
static GtUword gt_intset_32_get_test(GtIntset *intset, GtUword idx)
{
  GtIntset32 *intset_32 = gt_intset_32_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(idx < members->nextfree);

  return (gt_intset_32_sec_idx_largest_leq(sectionstart, idx) <<
         members->logsectionsize) + intset_32->elements[idx];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rcx
cmpq %rbx, 0x20(%rcx)
jbe 0x30172e
movq (%rcx), %rsi
movq $-0x2, %rdx
movq %rdx, %rdi
incq %rdx
cmpq %rbx, 0x10(%rsi,%rdi,8)
jbe 0x301709
movb 0x8(%rcx), %cl
shlq %cl, %rdx
movq 0x10(%rax), %rax
movl (%rax,%rbx,4), %eax
addq %rdx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c837
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_32.c
// Function: gt_intset_32_get_idx_smallest_geq_test
static GtUword gt_intset_32_get_idx_smallest_geq_test(GtIntset *intset,
                                                     GtUword value)
{
  GtIntset32 *intset_32 = gt_intset_32_cast(intset);
  GtIntsetMembers *members = intset->members;

  GtUword sectionnum = GT_ELEM2SECTION_M(value);

  if (value > members->previouselem)
    return members->num_of_elems;

  gt_assert(value <= members->maxelement);
  if (members->sectionstart[sectionnum] < members->sectionstart[sectionnum+1]) {
    return members->sectionstart[sectionnum] +
           gt_intset_32_idx_sm_geq(
                  intset_32->elements + members->sectionstart[sectionnum],
                  intset_32->elements + members->sectionstart[sectionnum+1] - 1,
                  (uint32_t) value);
  }
  return members->sectionstart[sectionnum];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x300662
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
cmpq %rbx, 0x38(%rdx)
jae 0x301766
movq 0x28(%rdx), %rax
jmp 0x3017c4
cmpq %rbx, 0x18(%rdx)
jb 0x3017cc
movq %rax, %rcx
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rax
movq 0x8(%rdx,%rsi,8), %rsi
cmpq %rsi, %rax
jae 0x3017c4
movq 0x10(%rcx), %rcx
cmpl %ebx, (%rcx,%rax,4)
jbe 0x30178d
xorl %ecx, %ecx
jmp 0x3017c1
leaq (%rcx,%rax,4), %rdx
leaq (%rcx,%rsi,4), %rcx
addq $-0x4, %rcx
cmpl %ebx, (%rcx)
jae 0x3017a9
subq %rdx, %rcx
sarq $0x2, %rcx
incq %rcx
jmp 0x3017c1
movq $-0x4, %rcx
movq %rcx, %rsi
addq $0x4, %rcx
cmpl %ebx, 0x4(%rdx,%rsi)
jb 0x3017b0
sarq $0x2, %rcx
addq %rcx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8c870
nopl (%rax)
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_new
GtIntset* gt_intset_8_new(GtUword maxelement, GtUword num_of_elems)
{
  GtIntset *intset;
  GtIntset8 *intset_8;
  GtIntsetMembers *members;
  GtUword idx;

  gt_assert(num_of_elems != 0);

  intset = gt_intset_create(gt_intset_8_class());
  intset_8 = gt_intset_8_cast(intset);
  members = intset->members;

  members->currentsectionnum = 0;
  members->maxelement = maxelement;
  members->nextfree = 0;
  members->num_of_elems = num_of_elems;
  members->previouselem = ULONG_MAX;
  members->refcount = 0;

  members->logsectionsize = GT_BITS_FOR_TYPE(uint8_t);
  members->numofsections = GT_ELEM2SECTION_M(maxelement) + 1;

  intset_8->elements =
    gt_malloc(sizeof (*intset_8->elements) * num_of_elems);

  members->sectionstart = gt_malloc(sizeof (*members->sectionstart) *
                                    (members->numofsections + 1));

  members->sectionstart[0] = 0;
  for (idx = (GtUword) 1; idx <= members->numofsections; idx++) {
    members->sectionstart[idx] = num_of_elems;
  }
  return intset;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
testq %rsi, %rsi
je 0x3018ac
movq %rsi, %rbx
movq %rdi, %r15
callq 0x3018b1
movq %rax, %rdi
callq 0x156688
movq %rax, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq %rax, %r12
movq 0x8(%r14), %r13
xorl %ebp, %ebp
movq %rbp, 0x10(%r13)
movq %r15, 0x18(%r13)
movq %rbp, 0x20(%r13)
movq %rbx, 0x28(%r13)
movq $-0x1, 0x38(%r13)
movq %rbp, 0x40(%r13)
movq $0x8, 0x8(%r13)
shrq $0x8, %r15
incq %r15
movq %r15, 0x30(%r13)
leaq 0xdd2cc(%rip), %r15     # 0x3deb19
movq %rbx, %rdi
movq %r15, %rsi
movl $0x4c, %edx
callq 0x104226
movq %rax, 0x10(%r12)
movq 0x30(%r13), %rax
leaq 0x8(,%rax,8), %rdi
movq %r15, %rsi
movl $0x4f, %edx
callq 0x104226
movq %rax, (%r13)
movq %rbp, (%rax)
cmpq %rbp, 0x30(%r13)
je 0x30189a
movl $0x1, %ecx
movq %rbx, (%rax,%rcx,8)
incq %rcx
cmpq 0x30(%r13), %rcx
jbe 0x30188d
movq %r14, %rax
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0x8c8a9
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_class
const GtIntsetClass* gt_intset_8_class(void)
{
  static const GtIntsetClass *this_c = NULL;
  if (this_c == NULL) {
    this_c = gt_intset_class_new(sizeof (GtIntset8),
                                 gt_intset_8_add,
                                 gt_intset_8_file_is_type,
                                 gt_intset_8_get,
                                 gt_intset_8_io,
                                 gt_intset_8_get_idx_smallest_geq,
                                 gt_intset_8_is_member,
                                 gt_intset_8_size_of_rep,
                                 gt_intset_8_size,
                                 gt_intset_8_size_of_struct,
                                 gt_intset_8_write,
                                 gt_intset_8_delete);
  }
  return this_c;
}

// Assembly:
movq 0x1bd740(%rip), %rax    # 0x4beff8
testq %rax, %rax
je 0x3018be
retq
pushq %r15
pushq %r14
pushq %rbx
leaq 0x250(%rip), %rax       # 0x301b1a
leaq 0x6a8(%rip), %r10       # 0x301f79
leaq 0x9f8(%rip), %r11       # 0x3022d0
leaq 0x88a(%rip), %rbx       # 0x302169
leaq 0x9dd(%rip), %r14       # 0x3022c3
leaq 0x89a(%rip), %r15       # 0x302187
leaq 0x6da(%rip), %rsi       # 0x301fce
leaq 0x9db(%rip), %rdx       # 0x3022d6
leaq 0x7aa(%rip), %rcx       # 0x3020ac
leaq 0x242(%rip), %r8        # 0x301b4b
leaq 0x8f9(%rip), %r9        # 0x302209
movl $0x18, %edi
pushq %rax
pushq %r10
pushq %r11
pushq %rbx
pushq %r14
pushq %r15
callq 0x15686c
addq $0x30, %rsp
movq %rax, 0x1bd6c9(%rip)    # 0x4beff8
popq %rbx
popq %r14
popq %r15
retq
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_write
GtIntset *gt_intset_8_write(GtIntset *intset, FILE *fp, GtError *err)
{
  gt_assert(intset != NULL);
  gt_assert(fp != NULL);
  gt_error_check(err);
  return gt_intset_8_io(intset, fp, err);
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
testq %rdi, %rdi
je 0x301fbf
movq %rsi, %rbx
testq %rsi, %rsi
je 0x301fc4
movq %rdx, %r14
movq %rdi, %r15
testq %rdx, %rdx
je 0x301fad
movq %r14, %rdi
callq 0xfcc32
testb %al, %al
jne 0x301fc9
movq %r15, %rdi
movq %rbx, %rsi
movq %r14, %rdx
jmp 0x301fb5
movq %r15, %rdi
movq %rbx, %rsi
xorl %edx, %edx
popq %rbx
popq %r14
popq %r15
jmp 0x301b4b
callq 0x8ca6f
callq 0x8ca36
callq 0x8c9fd
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_add
void gt_intset_8_add(GtIntset *intset, GtUword elem)
{
  GtIntset8 *intset_8 = gt_intset_8_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(members->nextfree < members->num_of_elems);
  gt_assert(elem <= members->maxelement);
  gt_assert(members->previouselem == ULONG_MAX || members->previouselem < elem);
  while (elem >= GT_SECTIONMINELEM(members->currentsectionnum + 1)) {
    gt_assert(members->currentsectionnum < members->numofsections);
    sectionstart[members->currentsectionnum + 1] = members->nextfree;
    members->currentsectionnum++;
  }
  gt_assert(GT_SECTIONMINELEM(members->currentsectionnum) <= elem &&
            elem < GT_SECTIONMINELEM(members->currentsectionnum+1) &&
            GT_ELEM2SECTION_M(elem) == members->currentsectionnum);
  intset_8->elements[members->nextfree++] = (uint8_t) elem;
  members->previouselem = elem;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movq 0x20(%rdx), %rsi
cmpq 0x28(%rdx), %rsi
jae 0x302098
cmpq %rbx, 0x18(%rdx)
jb 0x30209d
movq 0x38(%rdx), %rcx
cmpq $-0x1, %rcx
setne %dil
cmpq %rbx, %rcx
setae %cl
testb %cl, %dil
jne 0x3020a2
movq 0x8(%rdx), %rcx
movq 0x10(%rdx), %rdi
leaq 0x1(%rdi), %r8
movq %r8, %r9
shlq %cl, %r9
cmpq %rbx, %r9
ja 0x302062
movq (%rdx), %r9
cmpq 0x30(%rdx), %rdi
jae 0x302093
movq %rsi, (%r9,%r8,8)
movq 0x8(%rdx), %rcx
movq 0x10(%rdx), %r8
leaq 0x1(%r8), %rdi
movq %rdi, 0x10(%rdx)
addq $0x2, %r8
movq %r8, %r10
shlq %cl, %r10
cmpq %rbx, %r10
jbe 0x302039
movq %rdi, %r9
shlq %cl, %r9
movq %rbx, %r8
shrq %cl, %r8
cmpq %rbx, %r9
ja 0x3020a7
cmpq %rdi, %r8
jne 0x3020a7
movq 0x10(%rax), %rax
leaq 0x1(%rsi), %rcx
movq %rcx, 0x20(%rdx)
movb %bl, (%rax,%rsi)
movq %rbx, 0x38(%rdx)
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8cb1a
callq 0x8caa8
callq 0x8cb8c
callq 0x8cae1
callq 0x8cb53
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_get
GtUword gt_intset_8_get(GtIntset *intset, GtUword idx)
{
  GtUword quotient;
  GtIntset8 *intset_8 = gt_intset_8_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(idx < members->nextfree);

  quotient = gt_intset_8_binarysearch_sec_idx_largest_leq(
                                      sectionstart,
                                      sectionstart + members->numofsections - 1,
                                      idx);
  return (quotient << members->logsectionsize) +
         intset_8->elements[idx];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rcx
cmpq %rbx, 0x20(%rcx)
jbe 0x30215f
movq (%rcx), %rsi
movq 0x30(%rcx), %rdx
leaq (%rsi,%rdx,8), %rdi
addq $-0x8, %rdi
xorl %edx, %edx
cmpq %rbx, (%rsi)
cmovbeq %rsi, %rdx
cmpq %rdi, %rsi
jae 0x30211f
movq %rsi, %r8
movq %rdi, %r9
subq %r8, %r9
sarq $0x4, %r9
cmpq %rbx, (%r8,%r9,8)
jb 0x30210e
leaq (%r8,%r9,8), %rdi
addq $-0x8, %rdi
jmp 0x30211a
leaq (%r8,%r9,8), %rdx
leaq (%r8,%r9,8), %r8
addq $0x8, %r8
cmpq %rdi, %r8
jb 0x3020f4
testq %rdx, %rdx
je 0x302164
movq %rdx, %rdi
subq %rsi, %rdi
addq $-0x8, %rdi
addq $0x8, %rdx
addq $0x8, %rdi
leaq 0x8(%rdx), %rsi
cmpq %rbx, (%rdx)
movq %rsi, %rdx
jbe 0x302132
sarq $0x3, %rdi
movb 0x8(%rcx), %cl
shlq %cl, %rdi
movq 0x10(%rax), %rax
movzbl (%rax,%rbx), %eax
addq %rdi, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8cbc5
callq 0x8cbfe
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_is_member
bool gt_intset_8_is_member(GtIntset *intset, GtUword elem)
{
  GtIntset8 *intset_8 = gt_intset_8_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  if (elem <= members->maxelement)
  {
    const GtUword sectionnum = GT_ELEM2SECTION_M(elem);

    if (sectionstart[sectionnum] < sectionstart[sectionnum+1]) {
      return gt_intset_8_binarysearch_is_member(
                            intset_8->elements + sectionstart[sectionnum],
                            intset_8->elements + sectionstart[sectionnum+1] - 1,
                            (uint64_t) elem);
    }
  }
  return false;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
cmpq %rbx, 0x18(%rdx)
jb 0x3021fb
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rcx
movq 0x8(%rdx,%rsi,8), %rdx
cmpq %rdx, %rcx
jae 0x3021fb
movq 0x10(%rax), %rax
addq %rax, %rcx
addq %rdx, %rax
decq %rax
cmpq %rax, %rcx
ja 0x3021fb
movq %rax, %rsi
subq %rcx, %rsi
sarq %rsi
leaq (%rcx,%rsi), %rdx
cmpb %bl, (%rcx,%rsi)
jbe 0x3021f1
decq %rdx
movq %rdx, %rax
jmp 0x3021d2
jae 0x302205
incq %rdx
movq %rdx, %rcx
jmp 0x3021d2
xorl %eax, %eax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
movb $0x1, %al
jmp 0x3021fd
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_get_idx_smallest_geq
GtUword gt_intset_8_get_idx_smallest_geq(GtIntset *intset, GtUword value)
{
  GtIntset8 *intset_8 = gt_intset_8_cast(intset);
  GtIntsetMembers *members = intset->members;

  GtUword sectionnum = GT_ELEM2SECTION_M(value);

  if (value > members->previouselem)
    return members->num_of_elems;

  gt_assert(value <= members->maxelement);

  if (members->sectionstart[sectionnum] < members->sectionstart[sectionnum+1]) {
    return members->sectionstart[sectionnum] +
           gt_intset_8_binarysearch_idx_sm_geq(
                   intset_8->elements + members->sectionstart[sectionnum],
                   intset_8->elements + members->sectionstart[sectionnum+1] - 1,
                   (uint8_t) value);
  }
  return members->sectionstart[sectionnum];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
cmpq %rbx, 0x38(%rdx)
jae 0x30223c
movq 0x28(%rdx), %rax
jmp 0x3022b1
cmpq %rbx, 0x18(%rdx)
jb 0x3022b9
movq %rax, %rcx
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rax
movq 0x8(%rdx,%rsi,8), %rdx
cmpq %rdx, %rax
jae 0x3022b1
movq 0x10(%rcx), %rcx
addq %rcx, %rdx
decq %rdx
addq %rax, %rcx
cmpq %rdx, %rcx
ja 0x3022be
cmpb %bl, (%rcx)
jae 0x30227b
cmpb %bl, (%rdx)
jae 0x30227f
subq %rcx, %rdx
incq %rdx
movq %rdx, %rsi
jmp 0x3022ae
xorl %esi, %esi
jmp 0x3022ae
movq %rcx, %rsi
cmpq %rdx, %rcx
jae 0x3022ab
movq %rcx, %rsi
movq %rdx, %rdi
subq %rsi, %rdi
sarq %rdi
cmpb %bl, (%rsi,%rdi)
jb 0x3022a0
addq %rsi, %rdi
movq %rdi, %rdx
jmp 0x3022a6
addq %rdi, %rsi
incq %rsi
cmpq %rdx, %rsi
jb 0x30228a
subq %rcx, %rsi
addq %rsi, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8cc70
callq 0x8cc37
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_get_test
static GtUword gt_intset_8_get_test(GtIntset *intset, GtUword idx)
{
  GtIntset8 *intset_8 = gt_intset_8_cast(intset);
  GtIntsetMembers *members = intset->members;
  GtUword *sectionstart = members->sectionstart;
  gt_assert(idx < members->nextfree);

  return (gt_intset_8_sec_idx_largest_leq(sectionstart, idx) <<
         members->logsectionsize) + intset_8->elements[idx];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rcx
cmpq %rbx, 0x20(%rcx)
jbe 0x302954
movq (%rcx), %rsi
movq $-0x2, %rdx
movq %rdx, %rdi
incq %rdx
cmpq %rbx, 0x10(%rsi,%rdi,8)
jbe 0x30292e
movb 0x8(%rcx), %cl
shlq %cl, %rdx
movq 0x10(%rax), %rax
movzbl (%rax,%rbx), %eax
addq %rdx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8cce2
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/intset_8.c
// Function: gt_intset_8_get_idx_smallest_geq_test
static GtUword gt_intset_8_get_idx_smallest_geq_test(GtIntset *intset,
                                                      GtUword value)
{
  GtIntset8 *intset_8 = gt_intset_8_cast(intset);
  GtIntsetMembers *members = intset->members;

  GtUword sectionnum = GT_ELEM2SECTION_M(value);

  if (value > members->previouselem)
    return members->num_of_elems;

  gt_assert(value <= members->maxelement);
  if (members->sectionstart[sectionnum] < members->sectionstart[sectionnum+1]) {
    return members->sectionstart[sectionnum] +
           gt_intset_8_idx_sm_geq(
                   intset_8->elements + members->sectionstart[sectionnum],
                   intset_8->elements + members->sectionstart[sectionnum+1] - 1,
                   (uint8_t) value);
  }
  return members->sectionstart[sectionnum];
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %rbx
movq %rdi, %r14
callq 0x3018b1
movq %rax, %rdi
movq %r14, %rsi
callq 0x1566fc
movq 0x8(%r14), %rdx
movb 0x8(%rdx), %cl
movq %rbx, %rsi
shrq %cl, %rsi
cmpq %rbx, 0x38(%rdx)
jae 0x30298c
movq 0x28(%rdx), %rax
jmp 0x3029e0
cmpq %rbx, 0x18(%rdx)
jb 0x3029e8
movq %rax, %rcx
movq (%rdx), %rdx
movq (%rdx,%rsi,8), %rax
movq 0x8(%rdx,%rsi,8), %rsi
cmpq %rsi, %rax
jae 0x3029e0
movq 0x10(%rcx), %rdx
cmpb %bl, (%rdx,%rax)
jbe 0x3029b3
xorl %ecx, %ecx
jmp 0x3029dd
leaq (%rdx,%rsi), %rcx
decq %rcx
addq %rax, %rdx
cmpb %bl, (%rcx)
jae 0x3029c9
subq %rdx, %rcx
incq %rcx
jmp 0x3029dd
movq $-0x1, %rsi
leaq 0x1(%rsi), %rcx
cmpb %bl, 0x1(%rdx,%rsi)
movq %rcx, %rsi
jb 0x3029d0
addq %rcx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
callq 0x8cd1b
nopl (%rax)
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: gt_type_checker_obo_description
static const char* gt_type_checker_obo_description(GtTypeChecker *tc)
{
  GtTypeCheckerOBO *tco;
  gt_assert(tc);
  tco = gt_type_checker_obo_cast(tc);
  return gt_str_get(tco->description);
}

// Assembly:
pushq %rax
testq %rdi, %rdi
je 0x302a17
movq %rdi, %rsi
leaq 0x1b5918(%rip), %rdi    # 0x4b8320
callq 0x1831ba
movq 0x10(%rax), %rdi
popq %rax
jmp 0x11b0a1
callq 0x8cd54
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: gt_type_checker_obo_is_valid
static bool gt_type_checker_obo_is_valid(GtTypeChecker *tc, const char *type)
{
  GtTypeCheckerOBO *tco;
  gt_assert(tc && type);
  tco = gt_type_checker_obo_cast(tc);
  return gt_cstr_table_get(tco->feature_node_types, type) ? true : false;
}

// Assembly:
pushq %rbx
testq %rdi, %rdi
je 0x302a4d
movq %rsi, %rbx
testq %rsi, %rsi
je 0x302a4d
movq %rdi, %rsi
leaq 0x1b58ec(%rip), %rdi    # 0x4b8320
callq 0x1831ba
movq 0x18(%rax), %rdi
movq %rbx, %rsi
callq 0xe4995
testq %rax, %rax
setne %al
popq %rbx
retq
callq 0x8cd8b
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: gt_type_checker_obo_is_partof
static bool gt_type_checker_obo_is_partof(GtTypeChecker *tc,
                                          const char *parent_type,
                                          const char *child_type)
{
  GtTypeCheckerOBO *tco;
  gt_assert(tc && parent_type && child_type);
  tco = gt_type_checker_obo_cast(tc);
  return gt_type_graph_is_partof(tco->type_graph, parent_type, child_type);
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
testq %rdi, %rdi
je 0x302a90
movq %rsi, %r14
testq %rsi, %rsi
je 0x302a90
movq %rdx, %rbx
testq %rdx, %rdx
je 0x302a90
movq %rdi, %rsi
leaq 0x1b58ab(%rip), %rdi    # 0x4b8320
callq 0x1831ba
movq 0x20(%rax), %rdi
movq %r14, %rsi
movq %rbx, %rdx
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0x3030ae
callq 0x8cdc2
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: gt_type_checker_obo_is_a
static bool gt_type_checker_obo_is_a(GtTypeChecker *tc,
                                          const char *parent_type,
                                          const char *child_type)
{
  GtTypeCheckerOBO *tco;
  gt_assert(tc && parent_type && child_type);
  tco = gt_type_checker_obo_cast(tc);
  return gt_type_graph_is_a(tco->type_graph, parent_type, child_type);
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
testq %rdi, %rdi
je 0x302ad3
movq %rsi, %r14
testq %rsi, %rsi
je 0x302ad3
movq %rdx, %rbx
testq %rdx, %rdx
je 0x302ad3
movq %rdi, %rsi
leaq 0x1b5868(%rip), %rdi    # 0x4b8320
callq 0x1831ba
movq 0x20(%rax), %rdi
movq %r14, %rsi
movq %rbx, %rdx
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0x3032d6
callq 0x8cdf9
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: gt_type_checker_obo_free
static void gt_type_checker_obo_free(GtTypeChecker *tc)
{
  GtTypeCheckerOBO *tco = gt_type_checker_obo_cast(tc);
  gt_type_graph_delete(tco->type_graph);
  gt_cstr_table_delete(tco->feature_node_types);
  gt_str_delete(tco->description);
}

// Assembly:
pushq %rbx
movq %rdi, %rsi
leaq 0x1b583d(%rip), %rdi    # 0x4b8320
callq 0x1831ba
movq %rax, %rbx
movq 0x20(%rax), %rdi
callq 0x302d5f
movq 0x18(%rbx), %rdi
callq 0xe4c43
movq 0x10(%rbx), %rdi
popq %rbx
jmp 0x11bdbf
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: gt_type_checker_obo_new
GtTypeChecker* gt_type_checker_obo_new(const char *obo_file_path, GtError *err)
{
  GtTypeCheckerOBO *tco;
  GtTypeChecker *tc;
  gt_error_check(err);
  gt_assert(obo_file_path);
  tc = gt_type_checker_create(gt_type_checker_obo_class());
  tco = gt_type_checker_obo_cast(tc);
  tco->description= gt_str_new_cstr("OBO file ");
  gt_str_append_cstr(tco->description, obo_file_path);
  tco->feature_node_types = gt_cstr_table_new();
  tco->type_graph = gt_type_graph_new();
  if (create_feature_nodes(tco, obo_file_path, err)) {
    gt_type_checker_delete(tc);
    return NULL;
  }
  return tc;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movq %rsi, %r15
movq %rdi, %r12
testq %rsi, %rsi
je 0x302b2d
movq %r15, %rdi
callq 0xfcc32
testb %al, %al
jne 0x302c91
testq %r12, %r12
je 0x302c8c
leaq 0x1b57e3(%rip), %r14    # 0x4b8320
movq %r14, %rdi
callq 0x183090
movq %rax, %rbx
movq %r14, %rdi
movq %rax, %rsi
callq 0x1831ba
movq %rax, %r14
leaq 0xdc429(%rip), %rdi     # 0x3def86
callq 0x11acc9
movq %rax, 0x10(%r14)
movq %rax, %rdi
movq %r12, %rsi
callq 0x11acf3
callq 0xe48d0
movq %rax, 0x18(%r14)
callq 0x302cf0
movq %rax, 0x20(%r14)
testq %r15, %r15
je 0x302b98
movq %r15, %rdi
callq 0xfcc32
testb %al, %al
jne 0x302c96
movq %r12, %rdi
movq %r15, %rsi
callq 0x33f96c
testq %rax, %rax
je 0x302c70
movq %rax, %r15
movq %rax, %rdi
callq 0x3401e2
testq %rax, %rax
je 0x302c66
xorl %r12d, %r12d
leaq 0xdc44f(%rip), %r13     # 0x3df019
leaq 0x9a366(%rip), %rbp     # 0x39cf37
movq %r15, %rdi
movq %r12, %rsi
callq 0x340187
movq %rax, %rdi
movq %r13, %rsi
callq 0x17a40
testl %eax, %eax
jne 0x302c52
movq %r15, %rdi
movq %r12, %rsi
movq %rbp, %rdx
callq 0x3401a4
testq %rax, %rax
je 0x302c11
movq %rax, %rdi
leaq 0x9f0cd(%rip), %rsi     # 0x3a1cd5
callq 0x17a40
testl %eax, %eax
je 0x302c52
movq %r14, %rdi
movq %r15, %rsi
movq %r12, %rdx
leaq 0xdc614(%rip), %rcx     # 0x3df235
callq 0x302c9b
movq %r14, %rdi
movq %r15, %rsi
movq %r12, %rdx
leaq 0x7fb29(%rip), %rcx     # 0x38275f
callq 0x302c9b
movq %r15, %rdi
movq %r12, %rsi
callq 0x3401c9
movq 0x20(%r14), %rdi
movq %rax, %rsi
callq 0x302df6
incq %r12
movq %r15, %rdi
callq 0x3401e2
cmpq %rax, %r12
jb 0x302bd1
movq %r15, %rdi
callq 0x340086
jmp 0x302c7a
movq %rbx, %rdi
callq 0x183173
xorl %ebx, %ebx
movq %rbx, %rax
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0x8cea0
callq 0x8ce30
callq 0x8ce69
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_checker_obo.c
// Function: add_feature_node_from_tree
static void add_feature_node_from_tree(GtTypeCheckerOBO *tco,
                                       GtOBOParseTree *obo_parse_tree,
                                       GtUword stanza_num,
                                       const char *stanza_key)
{
  const char *value;
  gt_assert(tco && obo_parse_tree && stanza_key);
  value = gt_obo_parse_tree_get_stanza_value(obo_parse_tree, stanza_num,
                                             stanza_key);
  /* do not add values multiple times (possible for "name" values) */
  if (!gt_cstr_table_get(tco->feature_node_types, value))
    gt_cstr_table_add(tco->feature_node_types, value);
  else
    puts(value);
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
testq %rcx, %rcx
je 0x302ceb
movq %rdi, %rbx
movq %rsi, %rdi
movq %rdx, %rsi
movq %rcx, %rdx
callq 0x3401a4
movq %rax, %r14
movq 0x18(%rbx), %rdi
movq %rax, %rsi
callq 0xe4995
testq %rax, %rax
je 0x302cd8
movq %r14, %rdi
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0x17bd0
movq 0x18(%rbx), %rdi
movq %r14, %rsi
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0xe4936
callq 0x8ced9
// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/type_graph.c
// Function: gt_type_graph_new
GtTypeGraph* gt_type_graph_new(void)
{
  GtTypeGraph *type_graph = gt_malloc(sizeof (GtTypeGraph));
  type_graph->name2id = gt_hashmap_new(GT_HASH_DIRECT, NULL, NULL);
  type_graph->id2name = gt_hashmap_new(GT_HASH_DIRECT, NULL, NULL);
  type_graph->nodemap = gt_hashmap_new(GT_HASH_DIRECT, NULL, NULL);
  type_graph->nodes = gt_array_new(sizeof (GtTypeNode*));
  type_graph->part_of_out_edges = gt_bool_matrix_new();
  type_graph->part_of_in_edges = gt_bool_matrix_new();
  type_graph->ready = false;
  return type_graph;
}

// Assembly:
pushq %rbx
leaq 0xdc365(%rip), %rsi     # 0x3df05d
movl $0x38, %edi
movl $0x2b, %edx
callq 0x104226
movq %rax, %rbx
xorl %edi, %edi
xorl %esi, %esi
xorl %edx, %edx
callq 0x1008fc
movq %rax, (%rbx)
xorl %edi, %edi
xorl %esi, %esi
xorl %edx, %edx
callq 0x1008fc
movq %rax, 0x8(%rbx)
xorl %edi, %edi
xorl %esi, %esi
xorl %edx, %edx
callq 0x1008fc
movq %rax, 0x10(%rbx)
movl $0x8, %edi
callq 0xd214c
movq %rax, 0x18(%rbx)
callq 0x33f6d8
movq %rax, 0x20(%rbx)
callq 0x33f6d8
movq %rax, 0x28(%rbx)
movb $0x0, 0x30(%rbx)
movq %rbx, %rax
popq %rbx
retq