// File: /workspace/github_c_makefile_star2_O3/genometools[P]genometools/src/extended/condenseq.c
// Function: gt_condenseq_new
GtCondenseq *gt_condenseq_new(const GtEncseq *orig_es, GtLogger *logger)
{
  GtCondenseq *condenseq;
  condenseq = condenseq_new_empty(gt_encseq_alphabet(orig_es));

  condenseq->orig_num_seq = gt_encseq_num_of_sequences(orig_es);

  condenseq->ssptab = condenseq_fill_tab(condenseq, orig_es);
  condenseq->orig_len = gt_encseq_total_length(orig_es);

  condenseq_process_descriptions(condenseq, orig_es, logger);
  return condenseq;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x48, %rsp
movq %rsi, %r15
movq %rdi, %r13
callq 0xebcd9
movq %rax, %rbx
leaq 0x24cfad(%rip), %rsi    # 0x378c26
movl $0xa0, %edi
movl $0xdf, %edx
callq 0x104226
movq %rax, %rbp
movq %rbx, %rdi
callq 0xd0a3f
movq %rax, (%rbp)
xorps %xmm0, %xmm0
movups %xmm0, 0x68(%rbp)
movups %xmm0, 0x78(%rbp)
movups %xmm0, 0x88(%rbp)
movq $0x0, 0x98(%rbp)
movq $-0x1, 0x58(%rbp)
movups %xmm0, 0x8(%rbp)
movups %xmm0, 0x18(%rbp)
movups %xmm0, 0x28(%rbp)
movups %xmm0, 0x38(%rbp)
movups %xmm0, 0x48(%rbp)
movq %r13, %rdi
callq 0xe7bac
movq %rax, 0x80(%rbp)
cmpq $0x2, %rax
jb 0x12bd46
decq %rax
movq %r13, %rdi
movq %rax, %rsi
callq 0xeb6ee
leaq -0x1(%rax), %rdi
movq 0x80(%rbp), %rsi
decq %rsi
callq 0x156a7c
movq %rax, %rbx
cmpq $0x2, 0x80(%rbp)
jb 0x12bd48
movl $0x1, %r14d
movq %r13, %rdi
movq %r14, %rsi
callq 0xeb6ee
decq %rax
je 0x12c0c6
movq %rbx, %rdi
movq %rax, %rsi
callq 0x156715
incq %r14
cmpq 0x80(%rbp), %r14
jb 0x12bd19
jmp 0x12bd48
xorl %ebx, %ebx
movq %rbx, 0x28(%rbp)
movq %r13, %rdi
callq 0xe7b9c
movq %rax, 0x78(%rbp)
movq $0x0, 0x60(%rbp)
leaq 0x24cebf(%rip), %rdx    # 0x378c26
movl $0x80, %edi
movl $0x8, %esi
movl $0x7f, %ecx
callq 0x10436a
movq %rax, %r14
cmpq $0x0, 0x80(%rbp)
movq %rbp, 0x28(%rsp)
movq %r13, 0x20(%rsp)
movq %r15, 0x38(%rsp)
je 0x12beed
movl $0x80, %eax
movq %rax, 0x10(%rsp)
movq $-0x1, %rax
xorl %ebx, %ebx
xorl %edi, %edi
xorl %ebp, %ebp
movq %rdi, 0x8(%rsp)
movq %r14, %r12
movq %rbx, %r15
movq %rax, 0x18(%rsp)
movq 0x20(%rsp), %rdi
leaq 0x30(%rsp), %rsi
movq %rbp, %rdx
callq 0xec19e
movq 0x30(%rsp), %r14
testq %r14, %r14
je 0x12be0f
movq %rax, %rbx
callq 0x17870
movq (%rax), %rax
xorl %r13d, %r13d
movsbq (%rbx,%r13), %rcx
testq %rcx, %rcx
je 0x12be12
movzwl (%rax,%rcx,2), %ecx
andl $0x2000, %ecx           # imm = 0x2000
jne 0x12be12
incq %r13
cmpq %r13, %r14
jne 0x12bdec
movq %r14, %r13
jmp 0x12be12
xorl %r13d, %r13d
movq 0x10(%rsp), %rax
cmpq %r13, %rax
movq %r12, %r14
ja 0x12be68
movq %rax, %r12
leaq 0x1(%r13), %rbx
leaq 0x8(,%r13,8), %rsi
movq %r14, %rdi
leaq 0x24cdee(%rip), %rdx    # 0x378c26
movl $0x85, %ecx
callq 0x104461
leaq 0x1(%r12), %rdx
cmpq %rbx, %rdx
cmovbeq %rbx, %rdx
movq %rax, %r14
leaq (%rax,%r12,8), %rdi
subq %r12, %rdx
shlq $0x3, %rdx
xorl %esi, %esi
callq 0x173a0
movq %rbx, 0x10(%rsp)
movq 0x8(%rsp), %rdi
movq 0x18(%rsp), %rdx
incq (%r14,%r13,8)
cmpq %r15, %r13
movq %r15, %rbx
cmovaq %r13, %rbx
cmpq %rdx, %r13
movq %rdx, %rax
cmovbq %r13, %rax
addq %r13, %rdi
incq %rbp
movq 0x28(%rsp), %rcx
movq 0x80(%rcx), %rsi
cmpq %rsi, %rbp
jb 0x12bdb2
movq 0x28(%rsp), %rbp
movq 0x60(%rbp), %rcx
cmpq %rbx, %rax
jae 0x12bf03
cmpq %r13, %r15
cmovbeq %r13, %r15
cmpq %r13, %rdx
cmovbq %rdx, %r13
subq %r13, %r15
xorl %r12d, %r12d
movq (%r14,%rax,8), %rdx
movq %rdx, %r8
imulq %r15, %r8
addq %r8, %r12
imulq %rax, %rdx
addq %rdx, %rcx
movq %rcx, 0x60(%rbp)
incq %rax
decq %r15
jne 0x12bec7
movq %rbx, %rax
jmp 0x12bf06
movq 0x60(%rbp), %rcx
movq $-0x1, %rax
xorl %esi, %esi
xorl %ebx, %ebx
xorl %edi, %edi
xorl %r12d, %r12d
jmp 0x12bf0b
xorl %r12d, %r12d
movq 0x20(%rsp), %r13
imulq (%r14,%rax,8), %rax
addq %rcx, %rax
movq %rax, 0x60(%rbp)
movq %rdi, %r15
callq 0x156afc
cmpq %rax, %r12
movq %rax, 0x18(%rsp)
movq %r14, 0x40(%rsp)
jae 0x12bf5f
leaq 0x24d432(%rip), %rsi    # 0x379367
movq 0x38(%rsp), %rdi
movq %rbx, %rdx
movq %r12, %rcx
movq %rax, %r8
xorl %eax, %eax
callq 0x103fe1
movq %rbx, 0x58(%rbp)
movq 0x80(%rbp), %rdi
imulq %rbx, %rdi
movq %rdi, 0x60(%rbp)
jmp 0x12bf8f
leaq 0x24d45e(%rip), %rsi    # 0x3793c4
movq 0x38(%rsp), %rdi
movq %rax, %rdx
movq %r12, %rcx
xorl %eax, %eax
callq 0x103fe1
movq 0x80(%rbp), %rsi
movq %r15, %rdi
callq 0x156a7c
movq %rax, 0x20(%rbp)
movq 0x60(%rbp), %rdi
leaq 0x24cc90(%rip), %rdx    # 0x378c26
movl $0x1, %esi
movl $0xad, %ecx
callq 0x10436a
movq %rax, 0x48(%rbp)
cmpq $0x0, 0x80(%rbp)
je 0x12c085
movq %rax, %r14
movq $0x0, 0x8(%rsp)
xorl %r15d, %r15d
movq %r12, 0x10(%rsp)
movq %r13, %rdi
leaq 0x30(%rsp), %rsi
movq %r15, %rdx
callq 0xec19e
movq %rax, %rbp
movq 0x30(%rsp), %r12
testq %r12, %r12
je 0x12c024
callq 0x17870
movq (%rax), %rax
xorl %r13d, %r13d
movsbq (%rbp,%r13), %rcx
testq %rcx, %rcx
je 0x12c015
movzwl (%rax,%rcx,2), %ecx
andl $0x2000, %ecx           # imm = 0x2000
jne 0x12c015
incq %r13
cmpq %r13, %r12
jne 0x12bff3
movq %r12, %r13
cmpq %rbx, %r13
movq 0x10(%rsp), %r12
jbe 0x12c02c
jmp 0x12c0c1
xorl %r13d, %r13d
movq 0x10(%rsp), %r12
movq %r14, %rdi
movq %rbp, %rsi
movq %r13, %rdx
callq 0x17660
cmpq 0x18(%rsp), %r12
jae 0x12c050
addq %rbx, 0x8(%rsp)
movq %rbx, %r13
movq 0x28(%rsp), %rbp
jmp 0x12c06b
movq 0x8(%rsp), %rsi
addq %r13, %rsi
movq 0x28(%rsp), %rbp
movq 0x20(%rbp), %rdi
movq %rsi, 0x8(%rsp)
callq 0x156715
addq %r13, %r14
incq %r15
cmpq 0x80(%rbp), %r15
movq 0x20(%rsp), %r13
jb 0x12bfcb
jmp 0x12c08e
movq $0x0, 0x8(%rsp)
movq 0x8(%rsp), %rax
cmpq 0x60(%rbp), %rax
jne 0x12c0cb
leaq 0x24cb86(%rip), %rsi    # 0x378c26
movq 0x40(%rsp), %rdi
movl $0xc0, %edx
callq 0x1045eb
movq %rbp, %rax
addq $0x48, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0x3cf00
callq 0x3cf72
callq 0x3cf39