// File: /workspace/github_cpp_makefile_star2_O3/myudelson[P]hmm-scalable/HMMProblem.cpp
// Function: HMMProblem::toFileGroup(char const*)
void HMMProblem::toFileGroup(const char *filename) {
	FILE *fid = fopen(filename,"w");
	if(fid == NULL) {
		fprintf(stderr,"Can't write output model file %s\n",filename);
		exit(1);
	}
    
    // write solved id
    writeSolverInfo(fid, this->p);
    
	fprintf(fid,"Null skill ratios\t");
	for(NPAR m=0; m<this->p->nO; m++)
		fprintf(fid," %10.7f%s",this->null_obs_ratio[m],(m==(this->p->nO-1))?"\n":"\t");
	NCAT g;
	std::map<NCAT,std::string>::iterator it;
	for(g=0;g<this->p->nG;g++) {
		it = this->p->map_group_bwd->find(g);
		fprintf(fid,"%d\t%s\n",g,it->second.c_str());
		NPAR i,j,m;
		fprintf(fid,"PI\t");
		for(i=0; i<this->p->nS; i++)
			fprintf(fid,"%12.10f%s",this->pi[g][i],(i==(this->p->nS-1))?"\n":"\t");
		fprintf(fid,"A\t");
		for(i=0; i<this->p->nS; i++)
			for(j=0; j<this->p->nS; j++)
				fprintf(fid,"%12.10f%s",this->A[g][i][j],(i==(this->p->nS-1) && j==(this->p->nS-1))?"\n":"\t");
		fprintf(fid,"B\t");
		for(i=0; i<this->p->nS; i++)
			for(m=0; m<this->p->nO; m++)
				fprintf(fid,"%12.10f%s",this->B[g][i][m],(i==(this->p->nS-1) && m==(this->p->nO-1))?"\n":"\t");
	}
	fclose(fid);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x18, %rsp
movq %rsi, %r15
movq %rdi, %rbx
leaq 0x21a2d(%rip), %rsi     # 0x34546
movq %r15, %rdi
callq 0x4290
testq %rax, %rax
je 0x12e9e
movq %rax, %r13
movq 0x88(%rbx), %rsi
movq %rax, %rdi
callq 0xa125
leaq 0x21a27(%rip), %rdi     # 0x3456a
movl $0x12, %esi
movl $0x1, %edx
movq %r13, %rcx
callq 0x4480
movq %rbx, (%rsp)
movq 0x88(%rbx), %rax
movb 0x8b9(%rax), %cl
leaq 0x206f0(%rip), %rbp     # 0x3325d
leaq 0x22112(%rip), %r14     # 0x34c86
testb %cl, %cl
jle 0x12bc4
xorl %r15d, %r15d
leaq 0x219fb(%rip), %r12     # 0x3457d
movq (%rsp), %rbx
movsbl %cl, %eax
decl %eax
movq %rbp, %rdx
cmpl %eax, %r15d
je 0x12b96
movq %r14, %rdx
movq 0x18(%rbx), %rax
movsd (%rax,%r15,8), %xmm0
movq %r13, %rdi
movq %r12, %rsi
movb $0x1, %al
callq 0x4330
incq %r15
movq 0x88(%rbx), %rax
movsbq 0x8b9(%rax), %rcx
cmpq %rcx, %r15
jl 0x12b86
cmpl $0x0, 0x8bc(%rax)
jle 0x12e88
leaq 0x21d7d(%rip), %rbx     # 0x34955
xorl %edx, %edx
movq %r13, 0x10(%rsp)
movq %rbx, %r15
movq 0x928(%rax), %rax
movq 0x10(%rax), %r8
addq $0x8, %rax
testq %r8, %r8
je 0x12c30
movq %rax, %rcx
movq (%rsp), %r12
movslq 0x20(%r8), %rsi
xorl %edi, %edi
cmpq %rsi, %rdx
setg %dil
cmovleq %r8, %rcx
movq 0x10(%r8,%rdi,8), %r8
testq %r8, %r8
jne 0x12bfd
movq %rbp, %rbx
movq %r14, %rbp
cmpq %rax, %rcx
je 0x12c3a
movslq 0x20(%rcx), %rsi
cmpq %rsi, %rdx
cmovgeq %rcx, %rax
jmp 0x12c3a
movq %rbp, %rbx
movq %r14, %rbp
movq (%rsp), %r12
movq 0x28(%rax), %rcx
movq %r13, %rdi
leaq 0x2193f(%rip), %rsi     # 0x34587
xorl %eax, %eax
movq %rdx, 0x8(%rsp)
callq 0x4330
movl $0x3, %esi
movl $0x1, %edx
leaq 0x21929(%rip), %rdi     # 0x3458e
movq %r13, %rcx
callq 0x4480
movq 0x88(%r12), %rax
movb 0x8b8(%rax), %al
testb %al, %al
jle 0x12ccd
movq %r15, %r14
xorl %r15d, %r15d
movsbl %al, %eax
movq 0x38(%r12), %rcx
movq 0x8(%rsp), %rdx
movq (%rcx,%rdx,8), %rcx
movsd (%rcx,%r15,8), %xmm0
decl %eax
cmpl %eax, %r15d
movq %rbp, %rdx
cmoveq %rbx, %rdx
movq %r13, %rdi
movq %r14, %rsi
movb $0x1, %al
callq 0x4330
incq %r15
movq 0x88(%r12), %rax
movsbq 0x8b8(%rax), %rax
cmpq %rax, %r15
jl 0x12c85
movl $0x2, %esi
movl $0x1, %edx
leaq 0x218b4(%rip), %rdi     # 0x34592
movq %r13, %rcx
callq 0x4480
movq 0x88(%r12), %rax
movb 0x8b8(%rax), %al
testb %al, %al
jle 0x12d84
xorl %ebp, %ebp
testb %al, %al
jle 0x12d74
xorl %r15d, %r15d
movq 0x10(%rsp), %r12
leaq 0x21c44(%rip), %rbx     # 0x34955
movq (%rsp), %r13
movq 0x8(%rsp), %r14
movsbl %al, %eax
movq 0x40(%r13), %rcx
movq (%rcx,%r14,8), %rcx
movq (%rcx,%rbp,8), %rcx
movsd (%rcx,%r15,8), %xmm0
decl %eax
movl %r15d, %ecx
xorl %eax, %ecx
xorl %ebp, %eax
orl %ecx, %eax
leaq 0x21f45(%rip), %rdx     # 0x34c86
leaq 0x20515(%rip), %rax     # 0x3325d
cmoveq %rax, %rdx
movq %r12, %rdi
movq %rbx, %rsi
movb $0x1, %al
callq 0x4330
incq %r15
movq 0x88(%r13), %rax
movb 0x8b8(%rax), %al
movsbq %al, %rcx
cmpq %rcx, %r15
jl 0x12d1a
jmp 0x12d78
movsbq %al, %rcx
incq %rbp
cmpq %rcx, %rbp
jl 0x12cfe
movl $0x2, %esi
movl $0x1, %edx
leaq 0x21800(%rip), %rdi     # 0x34595
movq 0x10(%rsp), %rcx
callq 0x4480
movq (%rsp), %rax
movq 0x88(%rax), %rax
cmpb $0x0, 0x8b8(%rax)
jle 0x12e56
xorl %ebp, %ebp
movq 0x8(%rsp), %rdx
movb 0x8b9(%rax), %cl
testb %cl, %cl
jle 0x12e40
xorl %r15d, %r15d
leaq 0x21eb4(%rip), %r14     # 0x34c86
movq 0x10(%rsp), %r12
leaq 0x21b77(%rip), %rbx     # 0x34955
movq (%rsp), %r13
movsbl %cl, %ecx
movq 0x48(%r13), %rsi
movq (%rsi,%rdx,8), %rdx
movq (%rdx,%rbp,8), %rdx
movsd (%rdx,%r15,8), %xmm0
movsbl 0x8b8(%rax), %eax
decl %eax
xorl %ebp, %eax
decl %ecx
xorl %r15d, %ecx
orl %eax, %ecx
movq %r14, %rdx
leaq 0x2044a(%rip), %rax     # 0x3325d
cmoveq %rax, %rdx
movq %r12, %rdi
movq %rbx, %rsi
movb $0x1, %al
callq 0x4330
movq 0x8(%rsp), %rdx
incq %r15
movq 0x88(%r13), %rax
movsbq 0x8b9(%rax), %rcx
cmpq %rcx, %r15
jl 0x12de2
incq %rbp
movsbq 0x8b8(%rax), %rcx
cmpq %rcx, %rbp
jl 0x12dbe
jmp 0x12e5b
movq 0x8(%rsp), %rdx
incq %rdx
movslq 0x8bc(%rax), %rcx
cmpq %rcx, %rdx
leaq 0x203ee(%rip), %rbp     # 0x3325d
leaq 0x21e10(%rip), %r14     # 0x34c86
movq 0x10(%rsp), %r13
leaq 0x21ad3(%rip), %rbx     # 0x34955
jl 0x12bdf
movq %r13, %rdi
addq $0x18, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x4200
movq %r15, %rdi
callq 0x4bb8