LLM4Binary/decompile-bench-makefile huggingface dataset:
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/network.cc
// Function: toUpperCase(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>> const&)
std::string toUpperCase(const std::string & s)
{
    std::string ret(s.size(), char());
    for(unsigned int i = 0; i < s.size(); ++i)
        ret[i] = (s[i] <= 'z' && s[i] >= 'a') ? s[i]-('a'-'A') : s[i];
    return ret;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rsi, %r14
movq %rdi, %rbx
movq 0x8(%rsi), %rsi
leaq 0x10(%rdi), %rax
movq %rax, (%rdi)
xorl %edx, %edx
callq 0x4500
cmpq $0x0, 0x8(%r14)
je 0x7171
movl $0x1, %eax
xorl %ecx, %ecx
movq (%r14), %rdx
movzbl (%rdx,%rcx), %edx
leal -0x61(%rdx), %esi
leal -0x20(%rdx), %edi
cmpb $0x1a, %sil
movzbl %dil, %esi
cmovael %edx, %esi
movq (%rbx), %rdx
movb %sil, (%rdx,%rcx)
movl %eax, %ecx
incl %eax
cmpq %rcx, 0x8(%r14)
ja 0x7148
movq %rbx, %rax
addq $0x8, %rsp
popq %rbx
popq %r14
retq
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/network.cc
// Function: performVoronoiDecomp(bool, ATOM_NETWORK*, VORONOI_NETWORK*, std::vector<VOR_CELL, std::allocator<VOR_CELL>>*, bool, std::vector<BASIC_VCELL, std::allocator<BASIC_VCELL>>*)
bool performVoronoiDecomp(bool radial, ATOM_NETWORK *atmnet, VORONOI_NETWORK *vornet, vector<VOR_CELL> *cells, bool saveVorCells,
			   vector<BASIC_VCELL> *bvcells){

    container_periodic_poly *rad_con = NULL;
    container_periodic *no_rad_con = NULL;
    if (radial)
        rad_con = (container_periodic_poly *)performVoronoiDecomp(radial, atmnet, vornet, *cells, saveVorCells, *bvcells);
     else 
          no_rad_con = (container_periodic *)performVoronoiDecomp (radial, atmnet, vornet, *cells, saveVorCells, *bvcells); 

     delete rad_con;
     delete no_rad_con;
     return true;
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movzbl %r8b, %r8d
testl %edi, %edi
je 0x77e1
movl $0x1, %edi
callq 0x717c
movq %rax, %r14
xorl %ebx, %ebx
jmp 0x77ee
xorl %r14d, %r14d
xorl %edi, %edi
callq 0x717c
movq %rax, %rbx
testq %r14, %r14
je 0x7814
leaq 0x1f8(%r14), %rdi
callq 0xf028
movq %r14, %rdi
callq 0x149ea2
movl $0x298, %esi            # imm = 0x298
movq %r14, %rdi
callq 0x4470
testq %rbx, %rbx
je 0x783a
leaq 0x1d0(%rbx), %rdi
callq 0xf052
movq %rbx, %rdi
callq 0x149ea2
movl $0x270, %esi            # imm = 0x270
movq %rbx, %rdi
callq 0x4470
movb $0x1, %al
addq $0x8, %rsp
popq %rbx
popq %r14
retq
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/network.cc
// Function: viewVoronoiDecomp(ATOM_NETWORK*, double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
void viewVoronoiDecomp(ATOM_NETWORK *atmnet, double r_probe, string filename){
  ATOM_NETWORK newAtomNet;
  atmnet->copy(&newAtomNet);
  for(int i = 0; i < newAtomNet.numAtoms; i++){ newAtomNet.atoms[i].radius += r_probe; }
  VORONOI_NETWORK vornet;
  vector<BASIC_VCELL> bvcells;
  vector<VOR_CELL> advCells;
  container_periodic_poly *new_rad_con = (container_periodic_poly *)performVoronoiDecomp(true, &newAtomNet, &vornet, advCells, true, bvcells);
  writeZeoVisFile((char *)filename.data(), &advCells, &newAtomNet, &vornet);
  delete new_rad_con;
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
subq $0x520, %rsp            # imm = 0x520
movq %rsi, %rbx
movsd %xmm0, 0x8(%rsp)
movq %rdi, %r14
leaq 0xc0(%rsp), %r15
movq %r15, %rdi
callq 0x514f4
movq %r14, %rdi
movq %r15, %rsi
callq 0x528f4
movslq 0x1d0(%rsp), %rcx
testq %rcx, %rcx
movsd 0x8(%rsp), %xmm1
jle 0x958b
movq 0x3b0(%rsp), %rax
imulq $0x98, %rcx, %rcx
xorl %edx, %edx
movsd 0x30(%rax,%rdx), %xmm0
addsd %xmm1, %xmm0
movsd %xmm0, 0x30(%rax,%rdx)
addq $0x98, %rdx
cmpq %rdx, %rcx
jne 0x956f
leaq 0x48(%rsp), %rdi
callq 0x555c0
xorpd %xmm0, %xmm0
leaq 0x30(%rsp), %r9
movapd %xmm0, (%r9)
xorl %eax, %eax
movq %rax, 0x10(%r9)
leaq 0x10(%rsp), %rcx
movq %rax, 0x10(%rcx)
movapd %xmm0, (%rcx)
leaq 0xc0(%rsp), %rsi
leaq 0x48(%rsp), %rdx
movl $0x1, %edi
movl $0x1, %r8d
callq 0x717c
movq %rax, %r14
movq (%rbx), %rdi
leaq 0x10(%rsp), %rsi
leaq 0xc0(%rsp), %rdx
leaq 0x48(%rsp), %rcx
callq 0x6e237
testq %r14, %r14
je 0x9619
movq %r14, %rdi
addq $0x1f8, %rdi            # imm = 0x1F8
callq 0xf028
movq %r14, %rdi
callq 0x149ea2
movl $0x298, %esi            # imm = 0x298
movq %r14, %rdi
callq 0x4470
leaq 0x10(%rsp), %rdi
callq 0xebb4
leaq 0x30(%rsp), %rdi
callq 0xebe4
movq 0xa8(%rsp), %rdi
testq %rdi, %rdi
je 0x964a
movq 0xb8(%rsp), %rsi
subq %rdi, %rsi
callq 0x4470
leaq 0x90(%rsp), %rdi
callq 0xf1b8
leaq 0xc0(%rsp), %rdi
callq 0xec14
addq $0x520, %rsp            # imm = 0x520
popq %rbx
popq %r14
popq %r15
retq
jmp 0x9673
movq %rax, %rbx
jmp 0x9699
movq %rax, %rbx
leaq 0x10(%rsp), %rdi
callq 0xebb4
leaq 0x30(%rsp), %rdi
callq 0xebe4
leaq 0x48(%rsp), %rdi
callq 0xeab8
leaq 0xc0(%rsp), %rdi
callq 0xec14
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: readRadTable(char*)
void readRadTable(char *filename){
  radTable.clear();
  fstream input;
  input.open(filename, fstream::in);
  
  if(!input.is_open()){
    cerr << "Failed to open radius input file " << filename << "\n";
    cerr << "Exiting ..." << "\n";
    exit(1);
  }
  else{
    string type = "N/A";
    double radius = -1;

    while(!input.eof()){
      input >> type >> radius;
      radTable.insert(pair<string,double> (type,radius));
    }
  }
  input.close();
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x268, %rsp            # imm = 0x268
movq %rdi, %rbx
leaq 0x175acb(%rip), %rdi    # 0x1974d0
callq 0x22dc0
leaq 0x58(%rsp), %r14
movq %r14, %rdi
callq 0x4520
movq %r14, %rdi
movq %rbx, %rsi
movl $0x8, %edx
callq 0x43d0
leaq 0xd8(%rsp), %rdi
callq 0x4120
testb %al, %al
je 0x21b50
leaq 0x20(%rsp), %rax
movq %rax, -0x10(%rax)
leaq 0x12ded6(%rip), %rsi    # 0x14f922
leaq 0x12ded2(%rip), %rdx    # 0x14f925
leaq 0x10(%rsp), %rdi
callq 0x2263c
movabsq $-0x4010000000000000, %rax # imm = 0xBFF0000000000000
movq %rax, 0x8(%rsp)
movq 0x58(%rsp), %rax
movq -0x18(%rax), %rax
testb $0x2, 0x78(%rsp,%rax)
jne 0x21b0e
leaq 0x40(%rsp), %rbp
leaq 0x58(%rsp), %rbx
leaq 0x10(%rsp), %r14
leaq 0x8(%rsp), %r15
leaq 0x30(%rsp), %r12
leaq 0x175a30(%rip), %r13    # 0x1974d0
movq %rbx, %rdi
movq %r14, %rsi
callq 0x4560
movq %rax, %rdi
movq %r15, %rsi
callq 0x42a0
movq %rbp, 0x30(%rsp)
movq 0x10(%rsp), %rsi
movq 0x18(%rsp), %rdx
addq %rsi, %rdx
movq %r12, %rdi
callq 0xf32a
movsd 0x8(%rsp), %xmm0
movsd %xmm0, 0x50(%rsp)
movq %r13, %rdi
movq %r12, %rsi
callq 0x226cc
movq 0x30(%rsp), %rdi
cmpq %rbp, %rdi
je 0x21afe
movq 0x40(%rsp), %rsi
incq %rsi
callq 0x4470
movq 0x58(%rsp), %rax
movq -0x18(%rax), %rax
testb $0x2, 0x78(%rsp,%rax)
je 0x21aa0
movq 0x10(%rsp), %rdi
leaq 0x20(%rsp), %rax
cmpq %rax, %rdi
je 0x21b2a
movq 0x20(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x58(%rsp), %rdi
callq 0x4090
leaq 0x58(%rsp), %rdi
callq 0x4110
addq $0x268, %rsp            # imm = 0x268
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq 0x175499(%rip), %rdi    # 0x196ff0
leaq 0x12dda2(%rip), %rsi    # 0x14f900
movl $0x21, %edx
callq 0x44e0
movq 0x175481(%rip), %rdi    # 0x196ff0
movq %rbx, %rsi
callq 0x4440
leaq 0x1339b0(%rip), %rsi    # 0x15552e
movl $0x1, %edx
movq %rax, %rdi
callq 0x44e0
movq 0x17545e(%rip), %rdi    # 0x196ff0
leaq 0x12dfaa(%rip), %rsi    # 0x14fb43
movl $0xb, %edx
callq 0x44e0
movq 0x175446(%rip), %rdi    # 0x196ff0
leaq 0x13397d(%rip), %rsi    # 0x15552e
callq 0x4440
movl $0x1, %edi
callq 0x710c
jmp 0x21bc2
movq %rax, %rbx
jmp 0x21c04
jmp 0x21be5
movq %rax, %rbx
movq 0x30(%rsp), %rdi
cmpq %rbp, %rdi
je 0x21be8
movq 0x40(%rsp), %rsi
incq %rsi
callq 0x4470
jmp 0x21be8
movq %rax, %rbx
movq 0x10(%rsp), %rdi
leaq 0x20(%rsp), %rax
cmpq %rax, %rdi
je 0x21c04
movq 0x20(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x58(%rsp), %rdi
callq 0x4110
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: readMassTable(char*)
void readMassTable(char *filename){
  massTable.clear();
  fstream input;
  input.open(filename);
  
  if(!input.is_open()){
    cerr << "Failed to open molar mass input file " << filename << "\n";
    cerr << "Exiting ..." << "\n";
    exit(1);
  }
  else{
    string type = "N/A";
    double mass = -1;

    while(!input.eof()){
      input >> type >> mass;
      massTable.insert(pair<string,double> (type,mass));
    }
  }
  input.close();
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x268, %rsp            # imm = 0x268
movq %rdi, %rbx
leaq 0x1758ff(%rip), %rdi    # 0x197530
callq 0x22dc0
leaq 0x58(%rsp), %r14
movq %r14, %rdi
callq 0x4520
movq %r14, %rdi
movq %rbx, %rsi
movl $0x18, %edx
callq 0x43d0
leaq 0xd8(%rsp), %rdi
callq 0x4120
testb %al, %al
je 0x21d7c
leaq 0x20(%rsp), %rax
movq %rax, -0x10(%rax)
leaq 0x12dcaa(%rip), %rsi    # 0x14f922
leaq 0x12dca6(%rip), %rdx    # 0x14f925
leaq 0x10(%rsp), %rdi
callq 0x2263c
movabsq $-0x4010000000000000, %rax # imm = 0xBFF0000000000000
movq %rax, 0x8(%rsp)
movq 0x58(%rsp), %rax
movq -0x18(%rax), %rax
testb $0x2, 0x78(%rsp,%rax)
jne 0x21d3a
leaq 0x40(%rsp), %rbp
leaq 0x58(%rsp), %rbx
leaq 0x10(%rsp), %r14
leaq 0x8(%rsp), %r15
leaq 0x30(%rsp), %r12
leaq 0x175864(%rip), %r13    # 0x197530
movq %rbx, %rdi
movq %r14, %rsi
callq 0x4560
movq %rax, %rdi
movq %r15, %rsi
callq 0x42a0
movq %rbp, 0x30(%rsp)
movq 0x10(%rsp), %rsi
movq 0x18(%rsp), %rdx
addq %rsi, %rdx
movq %r12, %rdi
callq 0xf32a
movsd 0x8(%rsp), %xmm0
movsd %xmm0, 0x50(%rsp)
movq %r13, %rdi
movq %r12, %rsi
callq 0x226cc
movq 0x30(%rsp), %rdi
cmpq %rbp, %rdi
je 0x21d2a
movq 0x40(%rsp), %rsi
incq %rsi
callq 0x4470
movq 0x58(%rsp), %rax
movq -0x18(%rax), %rax
testb $0x2, 0x78(%rsp,%rax)
je 0x21ccc
movq 0x10(%rsp), %rdi
leaq 0x20(%rsp), %rax
cmpq %rax, %rdi
je 0x21d56
movq 0x20(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x58(%rsp), %rdi
callq 0x4090
leaq 0x58(%rsp), %rdi
callq 0x4110
addq $0x268, %rsp            # imm = 0x268
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq 0x17526d(%rip), %rdi    # 0x196ff0
leaq 0x12db9c(%rip), %rsi    # 0x14f926
movl $0x25, %edx
callq 0x44e0
movq 0x175255(%rip), %rdi    # 0x196ff0
movq %rbx, %rsi
callq 0x4440
leaq 0x133784(%rip), %rsi    # 0x15552e
movl $0x1, %edx
movq %rax, %rdi
callq 0x44e0
movq 0x175232(%rip), %rdi    # 0x196ff0
leaq 0x12dd7e(%rip), %rsi    # 0x14fb43
movl $0xb, %edx
callq 0x44e0
movq 0x17521a(%rip), %rdi    # 0x196ff0
leaq 0x133751(%rip), %rsi    # 0x15552e
callq 0x4440
movl $0x1, %edi
callq 0x710c
jmp 0x21dee
movq %rax, %rbx
jmp 0x21e30
jmp 0x21e11
movq %rax, %rbx
movq 0x30(%rsp), %rdi
cmpq %rbp, %rdi
je 0x21e14
movq 0x40(%rsp), %rsi
incq %rsi
callq 0x4470
jmp 0x21e14
movq %rax, %rbx
movq 0x10(%rsp), %rdi
leaq 0x20(%rsp), %rax
cmpq %rax, %rdi
je 0x21e30
movq 0x20(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x58(%rsp), %rdi
callq 0x4110
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: lookupRadius(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>, bool)
double lookupRadius(string atomType, bool radial){

  if(stripAtomNameInternalFlag == true) atomType = stripAtomName(atomType);

  if(!radial)
    return 0.0;
  map <string,double>::iterator  info = radTable.find(atomType);
  if(info == radTable.end()){
    cerr << "Unable to find radius for " << atomType << " in table. Please provide it " << "\n"
	 << "in a reference file or check you input file." << "\n"
	 << "Exiting ..." << "\n";
    exit(1);
  }
  else
    return info->second;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %rbx
subq $0x48, %rsp
movl %esi, %ebp
movq %rdi, %rbx
cmpb $0x1, 0x175798(%rip)    # 0x1975f0
jne 0x21ec8
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rbx), %rsi
movq 0x8(%rbx), %rdx
addq %rsi, %rdx
leaq 0x8(%rsp), %r14
movq %r14, %rdi
callq 0xf32a
leaq 0x28(%rsp), %rdi
movq %r14, %rsi
callq 0x21f9a
leaq 0x28(%rsp), %r14
movq %rbx, %rdi
movq %r14, %rsi
callq 0x4540
movq (%r14), %rdi
leaq 0x38(%rsp), %rax
cmpq %rax, %rdi
je 0x21eb1
movq 0x38(%rsp), %rsi
incq %rsi
callq 0x4470
movq 0x8(%rsp), %rdi
cmpq %r15, %rdi
je 0x21ec8
movq 0x18(%rsp), %rsi
incq %rsi
callq 0x4470
xorps %xmm0, %xmm0
testb %bpl, %bpl
je 0x21ef0
leaq 0x1755f9(%rip), %rdi    # 0x1974d0
movq %rbx, %rsi
callq 0x22dee
leaq 0x1755f2(%rip), %rcx    # 0x1974d8
cmpq %rcx, %rax
je 0x21efb
movsd 0x40(%rax), %xmm0
addq $0x48, %rsp
popq %rbx
popq %r14
popq %r15
popq %rbp
retq
movq 0x1750ee(%rip), %rdi    # 0x196ff0
leaq 0x12da43(%rip), %rsi    # 0x14f94c
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x43c0
leaq 0x12da47(%rip), %rsi    # 0x14f967
movq %rax, %rdi
callq 0x4440
leaq 0x1335ff(%rip), %rbx    # 0x15552e
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12da44(%rip), %rsi    # 0x14f985
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12dbe8(%rip), %rsi    # 0x14fb43
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
movl $0x1, %edi
callq 0x710c
movq %rax, %rbx
movq 0x8(%rsp), %rdi
cmpq %r15, %rdi
je 0x21f92
movq 0x18(%rsp), %rsi
incq %rsi
callq 0x4470
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: stripAtomName(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
std::string stripAtomName(std::string extAtom) {
        string atom2 = extAtom.substr(0, 2);
        string atom1 = extAtom.substr(0, 1);
        if (periodicTable.find(atom2) != periodicTable.end()) {
                return atom2;
        } else if (periodicTable.find(atom1) != periodicTable.end()) {
                return atom1;
        } else {
                return extAtom;
        }
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
subq $0x40, %rsp
movq %rsi, %r14
movq %rdi, %rbx
leaq 0x20(%rsp), %rdi
movl $0x2, %ecx
xorl %edx, %edx
callq 0x4490
movq %rsp, %rdi
movl $0x1, %ecx
movq %r14, %rsi
xorl %edx, %edx
callq 0x4490
leaq 0x1755ed(%rip), %rdi    # 0x1975c0
leaq 0x20(%rsp), %rsi
callq 0x22f8c
leaq 0x1755e4(%rip), %r15    # 0x1975c8
cmpq %r15, %rax
je 0x2200c
leaq 0x10(%rbx), %rcx
movq %rcx, (%rbx)
leaq 0x30(%rsp), %rax
movq -0x10(%rax), %rdx
cmpq %rax, %rdx
je 0x22043
movq %rdx, (%rbx)
movq 0x30(%rsp), %rcx
movq %rcx, 0x10(%rbx)
jmp 0x22049
leaq 0x1755ad(%rip), %rdi    # 0x1975c0
movq %rsp, %rsi
callq 0x22f8c
leaq 0x10(%rbx), %rcx
movq %rcx, (%rbx)
cmpq %r15, %rax
je 0x22067
leaq 0x10(%rsp), %rax
movq -0x10(%rax), %rdx
cmpq %rax, %rdx
je 0x2207f
movq %rdx, (%rbx)
movq 0x10(%rsp), %rcx
movq %rcx, 0x10(%rbx)
jmp 0x22085
movups (%rax), %xmm0
movups %xmm0, (%rcx)
movq 0x28(%rsp), %rcx
movq %rcx, 0x8(%rbx)
movq %rax, 0x20(%rsp)
movq $0x0, 0x28(%rsp)
movb $0x0, 0x30(%rsp)
jmp 0x220c0
movq (%r14), %rdx
leaq 0x10(%r14), %rax
cmpq %rax, %rdx
je 0x220a2
movq %rdx, (%rbx)
movq (%rax), %rcx
movq %rcx, 0x10(%rbx)
jmp 0x220a8
movups (%rax), %xmm0
movups %xmm0, (%rcx)
movq 0x8(%rsp), %rcx
movq %rcx, 0x8(%rbx)
movq %rax, (%rsp)
movq $0x0, 0x8(%rsp)
movb $0x0, 0x10(%rsp)
jmp 0x220c0
movups (%rax), %xmm0
movups %xmm0, (%rcx)
movq 0x8(%r14), %rcx
movq %rcx, 0x8(%rbx)
movq %rax, (%r14)
movq $0x0, 0x8(%r14)
movb $0x0, 0x10(%r14)
leaq 0x10(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x220db
movq 0x10(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x30(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x220f6
movq 0x30(%rsp), %rsi
incq %rsi
callq 0x4470
movq %rbx, %rax
addq $0x40, %rsp
popq %rbx
popq %r14
popq %r15
retq
jmp 0x22105
movq %rax, %rbx
leaq 0x10(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x22128
movq 0x10(%rsp), %rsi
incq %rsi
callq 0x4470
jmp 0x22128
movq %rax, %rbx
leaq 0x30(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x22143
movq 0x30(%rsp), %rsi
incq %rsi
callq 0x4470
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: lookupCovRadius(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
double lookupCovRadius(string atomType){
  map <string,double>::iterator  info = covRadTable.find(atomType);
  if(info == covRadTable.end()){
    cerr << "Unable to find covalent radius for " << atomType << " in table. Please modify networkinfo.cc and recomplie the code " << "\n"
         << "Exiting ..." << "\n";
    exit(1);
  }
  else
   return info->second;
}

// Assembly:
pushq %rbx
movq %rdi, %rbx
leaq 0x1753aa(%rip), %rdi    # 0x197500
movq %rbx, %rsi
callq 0x22dee
leaq 0x1753a3(%rip), %rcx    # 0x197508
cmpq %rcx, %rax
je 0x22171
movsd 0x40(%rax), %xmm0
popq %rbx
retq
movq 0x174e78(%rip), %rdi    # 0x196ff0
leaq 0x12d833(%rip), %rsi    # 0x14f9b2
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x43c0
leaq 0x12d840(%rip), %rsi    # 0x14f9d6
movq %rax, %rdi
callq 0x4440
leaq 0x133389(%rip), %rbx    # 0x15552e
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12d98c(%rip), %rsi    # 0x14fb43
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
movl $0x1, %edi
callq 0x710c
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: lookupMass(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
double lookupMass(string atomType){

  if(stripAtomNameInternalFlag == true) atomType = stripAtomName(atomType);

  map <string,double>::iterator  info = massTable.find(atomType);
  if(info == massTable.end()){
    cerr << "Unable to find molar mass for " << atomType << " in table. Please provide it " << "\n"
	 << "in a reference file or check you input file." << "\n"
	 << "Exiting ..." << "\n";
    exit(1);
  }
  else
    return info->second;
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
subq $0x40, %rsp
movq %rdi, %rbx
cmpb $0x1, 0x175409(%rip)    # 0x1975f0
jne 0x22254
leaq 0x10(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rbx), %rsi
movq 0x8(%rbx), %rdx
addq %rsi, %rdx
movq %rsp, %r14
movq %r14, %rdi
callq 0xf32a
leaq 0x20(%rsp), %rdi
movq %r14, %rsi
callq 0x21f9a
leaq 0x20(%rsp), %r14
movq %rbx, %rdi
movq %r14, %rsi
callq 0x4540
movq (%r14), %rdi
leaq 0x30(%rsp), %rax
cmpq %rax, %rdi
je 0x2223e
movq 0x30(%rsp), %rsi
incq %rsi
callq 0x4470
movq (%rsp), %rdi
cmpq %r15, %rdi
je 0x22254
movq 0x10(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x1752d5(%rip), %rdi    # 0x197530
movq %rbx, %rsi
callq 0x22dee
leaq 0x1752ce(%rip), %rcx    # 0x197538
cmpq %rcx, %rax
je 0x2227e
movsd 0x40(%rax), %xmm0
addq $0x40, %rsp
popq %rbx
popq %r14
popq %r15
retq
movq 0x174d6b(%rip), %rdi    # 0x196ff0
leaq 0x12d78a(%rip), %rsi    # 0x14fa16
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x43c0
leaq 0x12d6c4(%rip), %rsi    # 0x14f967
movq %rax, %rdi
callq 0x4440
leaq 0x13327c(%rip), %rbx    # 0x15552e
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12d6c1(%rip), %rsi    # 0x14f985
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12d865(%rip), %rsi    # 0x14fb43
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
movl $0x1, %edi
callq 0x710c
movq %rax, %rbx
movq (%rsp), %rdi
cmpq %r15, %rdi
je 0x22314
movq 0x10(%rsp), %rsi
incq %rsi
callq 0x4470
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: lookupAtomicNumber(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
int lookupAtomicNumber(string atomType){
  map <string,int>::iterator  info = atomicNumberTable.find(atomType);
  if(info == atomicNumberTable.end()){
    cerr << "Unable to find atomic number for " << atomType << " in table. Please provide it " << "\n"
         << "in the source code and recompile the code." << "\n"
         << "Exiting ..." << "\n";
    exit(1);
  }
  else
    return info->second;
}

// Assembly:
pushq %rbx
movq %rdi, %rbx
leaq 0x175239(%rip), %rdi    # 0x197560
movq %rbx, %rsi
callq 0x22e78
leaq 0x175232(%rip), %rcx    # 0x197568
cmpq %rcx, %rax
je 0x22340
movl 0x40(%rax), %eax
popq %rbx
retq
movq 0x174ca9(%rip), %rdi    # 0x196ff0
leaq 0x12d6e7(%rip), %rsi    # 0x14fa35
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x43c0
leaq 0x12d602(%rip), %rsi    # 0x14f967
movq %rax, %rdi
callq 0x4440
leaq 0x1331ba(%rip), %rbx    # 0x15552e
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12d6d1(%rip), %rsi    # 0x14fa57
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12d7a3(%rip), %rsi    # 0x14fb43
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
movl $0x1, %edi
callq 0x710c
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkinfo.cc
// Function: isMetal(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char>>)
bool isMetal(string atomType){
  map <string,bool>::iterator  info = atomicCharacterTable.find(atomType);
  if(info == atomicCharacterTable.end()){
    cerr << "Unable to find character information for " << atomType << " in table. Please modify networkinfo.cc and recomplie the code " << "\n" 
         << "Exiting ..." << "\n";
    exit(1);
  }
  else
    return info->second;
}

// Assembly:
pushq %rbx
movq %rdi, %rbx
leaq 0x1751c8(%rip), %rdi    # 0x197590
movq %rbx, %rsi
callq 0x22f02
leaq 0x1751c1(%rip), %rcx    # 0x197598
cmpq %rcx, %rax
je 0x223e1
movb 0x40(%rax), %al
popq %rbx
retq
movq 0x174c08(%rip), %rdi    # 0x196ff0
leaq 0x12d693(%rip), %rsi    # 0x14fa82
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x43c0
leaq 0x12d5d0(%rip), %rsi    # 0x14f9d6
movq %rax, %rdi
callq 0x4440
leaq 0x133119(%rip), %rbx    # 0x15552e
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x12d71c(%rip), %rsi    # 0x14fb43
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
movl $0x1, %edi
callq 0x710c
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkio.cc
// Function: parseFilename(char const*, char*, char*)
void parseFilename(const char * fileName, char *name, char *extension){
  string s(fileName);
  size_t index = s.find_last_of(".");
  if(index == string::npos){
    cerr << "Improper input filename " << fileName << "\n";
    cerr << "No . extension found. Exiting ..." << "\n";
    exit(1);
  }
  else{
    string prefix = s.substr(0, index);
    string suffix = s.substr(index + 1);
    strncpy(name, prefix.data(), prefix.size()); name[prefix.size()] = '\0';
    strncpy(extension, suffix.data(), suffix.size()); extension[suffix.size()] = '\0';
  }
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r12
pushq %rbx
subq $0x60, %rsp
movq %rdx, %rbx
movq %rsi, %r14
movq %rdi, %r15
leaq 0x20(%rsp), %r12
movq %rsp, %rdx
movq %r12, %rdi
movq %r15, %rsi
callq 0x2f6b2
leaq 0x133e13(%rip), %rsi    # 0x156e5a
movl $0x1, %ecx
movq %r12, %rdi
movq $-0x1, %rdx
callq 0x4860
cmpq $-0x1, %rax
je 0x23129
movq %rax, %r12
movq %rsp, %rdi
leaq 0x20(%rsp), %rsi
xorl %edx, %edx
movq %rax, %rcx
callq 0x4490
incq %r12
leaq 0x40(%rsp), %rdi
leaq 0x20(%rsp), %rsi
movq %r12, %rdx
movq $-0x1, %rcx
callq 0x4490
movq (%rsp), %rsi
movq 0x8(%rsp), %r15
movq %r14, %rdi
movq %r15, %rdx
callq 0x4210
xorl %ebp, %ebp
movb %bpl, (%r14,%r15)
leaq 0x50(%rsp), %r12
movq -0x10(%r12), %r14
movq -0x8(%r12), %r15
movq %rbx, %rdi
movq %r14, %rsi
movq %r15, %rdx
callq 0x4210
movb %bpl, (%rbx,%r15)
cmpq %r12, %r14
je 0x230e6
movq 0x50(%rsp), %rsi
incq %rsi
movq %r14, %rdi
callq 0x4470
leaq 0x10(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x23101
movq 0x10(%rsp), %rsi
incq %rsi
callq 0x4470
leaq 0x30(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x2311c
movq 0x30(%rsp), %rsi
incq %rsi
callq 0x4470
addq $0x60, %rsp
popq %rbx
popq %r12
popq %r14
popq %r15
popq %rbp
retq
movq 0x173ec0(%rip), %rdi    # 0x196ff0
leaq 0x12c9dd(%rip), %rsi    # 0x14fb14
movl $0x18, %edx
callq 0x44e0
movq 0x173ea8(%rip), %rdi    # 0x196ff0
movq %r15, %rsi
callq 0x4440
leaq 0x1323d7(%rip), %rsi    # 0x15552e
movl $0x1, %edx
movq %rax, %rdi
callq 0x44e0
movq 0x173e85(%rip), %rdi    # 0x196ff0
leaq 0x12c9bb(%rip), %rsi    # 0x14fb2d
movl $0x21, %edx
callq 0x44e0
movq 0x173e6d(%rip), %rdi    # 0x196ff0
leaq 0x1323a4(%rip), %rsi    # 0x15552e
callq 0x4440
movl $0x1, %edi
callq 0x710c
jmp 0x231bb
movq %rax, %rbx
leaq 0x10(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x231be
movq 0x10(%rsp), %rsi
incq %rsi
callq 0x4470
jmp 0x231be
movq %rax, %rbx
leaq 0x30(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x231d9
movq 0x30(%rsp), %rsi
incq %rsi
callq 0x4470
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkio.cc
// Function: changeAtomType(ATOM*)
void changeAtomType(ATOM *atom){
    switch(atom->type[0]){
        case 'O': case 'o':
            atom->type = "O";
            break;
        case 'T': case 't':
            atom->type = "Si";
            break;
        case 'A': case 'a':
            atom->type = "Si";
            break;
        case 'H': case 'h':
            atom->type = "H";
            break;
        case 'S': case 's':
            if(tolower(atom->type[1]) == 'i')
                atom->type = "Si";
            else
                atom->type = "S";
            break;
        default:
            cerr<< "Error: Atom name not recognized " << atom->type << "\n";
            //	<< "Exiting..." << "\n";
            //    exit(1);
            break;
    }
}

// Assembly:
pushq %r14
pushq %rbx
pushq %rax
movq %rdi, %r14
leaq 0x40(%rdi), %rbx
movq 0x40(%rdi), %rcx
movzbl (%rcx), %eax
cmpl $0x60, %eax
jg 0x26e29
cmpl $0x4e, %eax
jle 0x26e55
cmpl $0x4f, %eax
je 0x26e45
cmpl $0x53, %eax
je 0x26ecf
cmpl $0x54, %eax
je 0x26ebc
jmp 0x26e5f
cmpl $0x6e, %eax
jle 0x26ea5
cmpl $0x74, %eax
je 0x26ebc
cmpl $0x73, %eax
je 0x26ecf
cmpl $0x6f, %eax
jne 0x26e5f
movq 0x48(%r14), %rdx
leaq 0x12897a(%rip), %rcx    # 0x14f7ca
jmp 0x26ee8
cmpl $0x41, %eax
je 0x26ebc
cmpl $0x48, %eax
je 0x26eaf
movq 0x17018a(%rip), %rbx    # 0x196ff0
leaq 0x12999e(%rip), %rsi    # 0x15080b
movl $0x20, %edx
movq %rbx, %rdi
callq 0x44e0
movq 0x40(%r14), %rsi
movq 0x48(%r14), %rdx
movq %rbx, %rdi
callq 0x44e0
leaq 0x12e69d(%rip), %rsi    # 0x15552e
movl $0x1, %edx
movq %rax, %rdi
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0x44e0
cmpl $0x61, %eax
je 0x26ebc
cmpl $0x68, %eax
jne 0x26e5f
movq 0x48(%r14), %rdx
leaq 0x1321ca(%rip), %rcx    # 0x159084
jmp 0x26ee8
movq 0x48(%r14), %rdx
leaq 0x12890e(%rip), %rcx    # 0x14f7d5
movl $0x2, %r8d
jmp 0x26eee
movsbl 0x1(%rcx), %edi
callq 0x4600
movq 0x48(%r14), %rdx
cmpl $0x69, %eax
je 0x26ec0
leaq 0x1312ad(%rip), %rcx    # 0x158195
movl $0x1, %r8d
movq %rbx, %rdi
xorl %esi, %esi
addq $0x8, %rsp
popq %rbx
popq %r14
jmp 0x4670
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkio.cc
// Function: readNetFile(char*, VORONOI_NETWORK*)
bool readNetFile(char * filename, VORONOI_NETWORK *vornet){
  fstream input;
  input.open(filename);
  if(!input.is_open()){
    cout<< "Failed to open .nt2 file " << filename << "\n";
    cout<<"Exiting ..." << "\n";
//    exit(1);
    return false;
  }
  else{
    readNet(&input, vornet);
  }
  return true;
}

// Assembly:
pushq %r15
pushq %r14
pushq %rbx
subq $0x210, %rsp            # imm = 0x210
movq %rsi, %r15
movq %rdi, %r14
movq %rsp, %rbx
movq %rbx, %rdi
callq 0x4520
movq %rbx, %rdi
movq %r14, %rsi
movl $0x18, %edx
callq 0x43d0
leaq 0x80(%rsp), %rdi
callq 0x4120
movl %eax, %ebx
testb %al, %al
je 0x2aa1c
movq %rsp, %rdi
movq %r15, %rsi
callq 0x2a645
jmp 0x2aab8
movq 0x16c59d(%rip), %r15    # 0x196fc0
leaq 0x1258ed(%rip), %rsi    # 0x150317
movl $0x19, %edx
movq %r15, %rdi
callq 0x44e0
testq %r14, %r14
je 0x2aa58
movq %r14, %rdi
callq 0x41e0
movq 0x16c575(%rip), %rdi    # 0x196fc0
movq %r14, %rsi
movq %rax, %rdx
callq 0x44e0
jmp 0x2aa70
movq (%r15), %rax
movq -0x18(%rax), %rax
leaq (%r15,%rax), %rdi
movl 0x20(%r15,%rax), %esi
orl $0x1, %esi
callq 0x4710
movq 0x16c549(%rip), %rdi    # 0x196fc0
leaq 0x12aab0(%rip), %rsi    # 0x15552e
movl $0x1, %edx
callq 0x44e0
movq 0x16c531(%rip), %rdi    # 0x196fc0
leaq 0x1250ad(%rip), %rsi    # 0x14fb43
movl $0xb, %edx
callq 0x44e0
movq 0x16c519(%rip), %rdi    # 0x196fc0
leaq 0x12aa80(%rip), %rsi    # 0x15552e
movl $0x1, %edx
callq 0x44e0
movq %rsp, %rdi
callq 0x4110
movl %ebx, %eax
addq $0x210, %rsp            # imm = 0x210
popq %rbx
popq %r14
popq %r15
retq
movq %rax, %rbx
movq %rsp, %rdi
callq 0x4110
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkio.cc
// Function: get_timestamp[abi:cxx11]()
string get_timestamp()
{
    char buff[80];
    time_t rawtime;
    struct tm* timeinfo;

    time(&rawtime);
    timeinfo = localtime(&rawtime);
    strftime(buff, 80, "%F_%T", timeinfo);

    return string(buff);
}

// Assembly:
pushq %r14
pushq %rbx
subq $0x68, %rsp
movq %rdi, %rbx
leaq 0x8(%rsp), %r14
movq %r14, %rdi
callq 0x43e0
movq %r14, %rdi
callq 0x4320
leaq 0x124ac5(%rip), %rdx    # 0x1503bf
leaq 0x10(%rsp), %r14
movl $0x50, %esi
movq %r14, %rdi
movq %rax, %rcx
callq 0x4360
leaq 0x10(%rbx), %rax
movq %rax, (%rbx)
movq %r14, %rdi
callq 0x41e0
leaq (%rsp,%rax), %rdx
addq $0x10, %rdx
movq %rbx, %rdi
movq %r14, %rsi
callq 0x2263c
movq %rbx, %rax
addq $0x68, %rsp
popq %rbx
popq %r14
retq
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: PATH::PATH()
PATH::PATH(){
  max_radius = max_inc_radius = length = -1;
  visitedNodes = vector<DIJKSTRA_NODE> ();
  toSink = false;
  visitedSourceIDs = set<int> ();
}

// Assembly:
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x50, %rsp
movq %rdi, %rbx
xorps %xmm0, %xmm0
movups %xmm0, (%rdi)
movq $0x0, 0x10(%rdi)
addq $0x18, %rdi
xorps %xmm0, %xmm0
xorps %xmm1, %xmm1
xorps %xmm2, %xmm2
xorps %xmm3, %xmm3
movl $0xffffffff, %esi       # imm = 0xFFFFFFFF
movl $0x1, %edx
callq 0x50c7c
xorps %xmm0, %xmm0
movups %xmm0, 0x80(%rbx)
xorl %r13d, %r13d
movq %r13, 0x90(%rbx)
leaq 0x98(%rbx), %r14
leaq 0xa0(%rbx), %r12
movl $0x0, 0xa0(%rbx)
movq %r13, 0xa8(%rbx)
movq %r12, 0xb0(%rbx)
movq %r12, 0xb8(%rbx)
movq %r13, 0xc0(%rbx)
movabsq $-0x4010000000000000, %rax # imm = 0xBFF0000000000000
movq %rax, 0x70(%rbx)
movq %rax, 0x68(%rbx)
movq %rax, 0x60(%rbx)
leaq 0x30(%rsp), %r15
movq %r13, 0x10(%r15)
movaps %xmm0, (%r15)
movq %rsp, %rdi
movq %r13, 0x10(%rdi)
movaps %xmm0, (%rdi)
movq (%rbx), %rax
movups 0x8(%rbx), %xmm0
movq (%r15), %rcx
movq %rcx, (%rbx)
movq 0x8(%r15), %rcx
movq %rcx, 0x8(%rbx)
movq 0x10(%r15), %rcx
movq %rcx, 0x10(%rbx)
movq (%rdi), %rcx
movq 0x8(%rdi), %rdx
movq 0x10(%rdi), %rsi
movq %rax, (%rdi)
movups %xmm0, 0x8(%rdi)
movq %rcx, (%r15)
movq %rdx, 0x8(%r15)
movq %rsi, 0x10(%r15)
callq 0xf07c
movq %r15, %rdi
callq 0xf07c
movb $0x0, 0x78(%rbx)
leaq 0x8(%rsp), %r15
xorps %xmm0, %xmm0
movaps %xmm0, 0x8(%r15)
movaps %xmm0, 0x18(%r15)
movaps %xmm0, -0x8(%r15)
movq %r15, 0x10(%r15)
movq %r15, 0x18(%r15)
movq %r13, 0x20(%r15)
movq %r14, %rdi
callq 0x132c8
movq 0x8(%r15), %rax
testq %rax, %rax
je 0x312f4
movl 0x8(%rsp), %ecx
movl %ecx, 0xa0(%rbx)
movq %rax, 0xa8(%rbx)
movq 0x18(%rsp), %rcx
movq %rcx, 0xb0(%rbx)
movq 0x20(%rsp), %rcx
movq %rcx, 0xb8(%rbx)
movq %r12, 0x8(%rax)
movq 0x28(%rsp), %rax
movq %rax, 0xc0(%rbx)
xorl %eax, %eax
movq %rax, 0x10(%rsp)
movq %r15, 0x18(%rsp)
movq %r15, 0x20(%rsp)
movq %rax, 0x28(%rsp)
movq %rsp, %rdi
callq 0xf168
addq $0x50, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
retq
movq %rax, %r14
movq %rbx, %rdi
callq 0xf07c
movq %r14, %rdi
callq 0x4780
nop
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: PATH::PATH(DIJKSTRA_NODE, double, double, double)
PATH::PATH(DIJKSTRA_NODE cNode, double maxRadius, double maxIncRadius, double len){
  currentNode = cNode;
  max_radius = maxRadius;
  max_inc_radius = maxIncRadius;
  length = len;
  visitedNodes = vector<DIJKSTRA_NODE> ();
  toSink = false;
  visitedSourceIDs = set<int> ();
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x68, %rsp
movsd %xmm2, 0x18(%rsp)
movsd %xmm1, 0x10(%rsp)
movsd %xmm0, 0x8(%rsp)
movq %rsi, %r15
movq %rdi, %rbx
xorps %xmm0, %xmm0
movups %xmm0, (%rdi)
movq $0x0, 0x10(%rdi)
leaq 0x18(%rdi), %r12
xorps %xmm0, %xmm0
xorps %xmm1, %xmm1
xorps %xmm2, %xmm2
xorps %xmm3, %xmm3
movq %r12, %rdi
movl $0xffffffff, %esi       # imm = 0xFFFFFFFF
movl $0x1, %edx
callq 0x50c7c
leaq 0x80(%rbx), %rbp
xorps %xmm0, %xmm0
movups %xmm0, 0x80(%rbx)
xorl %eax, %eax
movq %rax, 0x90(%rbx)
leaq 0x98(%rbx), %r14
leaq 0xa0(%rbx), %r13
movl $0x0, 0xa0(%rbx)
movq %rax, 0xa8(%rbx)
movq %r13, 0xb0(%rbx)
movq %r13, 0xb8(%rbx)
movq %rax, 0xc0(%rbx)
movups (%r15), %xmm0
movups 0x10(%r15), %xmm1
movups %xmm1, 0x10(%r12)
movups %xmm0, (%r12)
leaq 0x38(%rbx), %r12
leaq 0x20(%r15), %rsi
movq %r12, %rdi
callq 0x38d5a
movb 0x40(%r15), %al
movb %al, 0x58(%rbx)
movq 0x38(%r15), %rax
movq %rax, 0x50(%rbx)
movsd 0x8(%rsp), %xmm0
movsd %xmm0, 0x60(%rbx)
movsd 0x10(%rsp), %xmm0
movsd %xmm0, 0x68(%rbx)
movsd 0x18(%rsp), %xmm0
movsd %xmm0, 0x70(%rbx)
xorl %r12d, %r12d
leaq 0x50(%rsp), %r15
movq %r12, 0x10(%r15)
xorps %xmm0, %xmm0
movaps %xmm0, (%r15)
leaq 0x20(%rsp), %rdi
movq %r12, 0x10(%rdi)
movaps %xmm0, (%rdi)
movq (%rbx), %rax
movups 0x8(%rbx), %xmm0
movq (%r15), %rcx
movq %rcx, (%rbx)
movq 0x8(%r15), %rcx
movq %rcx, 0x8(%rbx)
movq 0x10(%r15), %rcx
movq %rcx, 0x10(%rbx)
movq (%rdi), %rcx
movq 0x8(%rdi), %rdx
movq 0x10(%rdi), %rsi
movq %rax, (%rdi)
movups %xmm0, 0x8(%rdi)
movq %rcx, (%r15)
movq %rdx, 0x8(%r15)
movq %rsi, 0x10(%r15)
callq 0xf07c
movq %r15, %rdi
callq 0xf07c
movb $0x0, 0x78(%rbx)
leaq 0x28(%rsp), %r15
xorps %xmm0, %xmm0
movaps %xmm0, 0x8(%r15)
movaps %xmm0, 0x18(%r15)
movaps %xmm0, -0x8(%r15)
movq %r15, 0x10(%r15)
movq %r15, 0x18(%r15)
movq %r12, 0x20(%r15)
movq %r14, %rdi
callq 0x132c8
movq 0x8(%r15), %rax
testq %rax, %rax
je 0x31503
movl 0x28(%rsp), %ecx
movl %ecx, 0xa0(%rbx)
movq %rax, 0xa8(%rbx)
movq 0x38(%rsp), %rcx
movq %rcx, 0xb0(%rbx)
movq 0x40(%rsp), %rcx
movq %rcx, 0xb8(%rbx)
movq %r13, 0x8(%rax)
movq 0x48(%rsp), %rax
movq %rax, 0xc0(%rbx)
xorl %eax, %eax
movq %rax, 0x30(%rsp)
movq %r15, 0x38(%rsp)
movq %r15, 0x40(%rsp)
movq %rax, 0x48(%rsp)
leaq 0x20(%rsp), %rdi
callq 0xf168
addq $0x68, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq %rax, %r15
movq %r14, %rdi
callq 0xf168
movq (%rbp), %rdi
testq %rdi, %rdi
je 0x3153f
movq 0x90(%rbx), %rsi
subq %rdi, %rsi
callq 0x4470
movq (%r12), %rdi
testq %rdi, %rdi
je 0x31559
movq 0x48(%rbx), %rsi
subq %rdi, %rsi
callq 0x4470
jmp 0x31559
movq %rax, %r15
movq %rbx, %rdi
callq 0xf07c
movq %r15, %rdi
callq 0x4780
nop
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: PATH::printPathEdges(std::vector<int, std::allocator<int>>, DIJKSTRA_NETWORK*)
void PATH::printPathEdges (vector<int> nodeList, DIJKSTRA_NETWORK *dnet){
  if(nodeList.size() < 2)
    return;
  
  unsigned int index = 0;
  int from, to;
  
  while(index < nodeList.size()-1){
    from = nodeList.at(index);
    to = nodeList.at(index+1);
    
    DIJKSTRA_NODE node = dnet->nodes.at(from);
    for(unsigned int i = 0; i < node.connections.size(); i++){
      CONN conn = node.connections.at(i);
      if(conn.to == to){
	conn.print();
      }
    }
    index++;
  }
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x98, %rsp
movq %rdx, 0x10(%rsp)
movq 0x8(%rsi), %rax
movq %rsi, 0x8(%rsp)
subq (%rsi), %rax
cmpq $0x5, %rax
jb 0x3170c
movq 0x8(%rsp), %rcx
movq (%rcx), %rax
movq 0x8(%rcx), %rdx
subq %rax, %rdx
cmpq $0x4, %rdx
je 0x3170c
sarq $0x2, %rdx
xorl %esi, %esi
movq 0x165a04(%rip), %r13    # 0x196fc0
leaq 0x70(%rsp), %r12
movabsq $-0x3333333333333333, %rbx # imm = 0xCCCCCCCCCCCCCCCD
xorl %r14d, %r14d
cmpq %rsi, %rdx
jbe 0x3171e
incl %r14d
cmpq %r14, %rdx
jbe 0x31727
movslq (%rax,%rsi,4), %rsi
movq 0x10(%rsp), %rdx
movq (%rdx), %rcx
movq 0x8(%rdx), %rdx
subq %rcx, %rdx
sarq $0x3, %rdx
movabsq $-0x71c71c71c71c71c7, %rdi # imm = 0x8E38E38E38E38E39
imulq %rdi, %rdx
cmpq %rsi, %rdx
jbe 0x3171e
movq %r13, %rbp
movq %r14, 0x18(%rsp)
movl (%rax,%r14,4), %r14d
leaq (%rsi,%rsi,8), %rax
leaq (%rcx,%rax,8), %r15
addq $0x20, %r15
movups -0x20(%r15), %xmm0
movups -0x10(%r15), %xmm1
movaps %xmm1, 0x30(%rsp)
movaps %xmm0, 0x20(%rsp)
leaq 0x40(%rsp), %r13
movq %r13, %rdi
movq %r15, %rsi
callq 0x38318
movb 0x20(%r15), %al
movb %al, 0x20(%r13)
movq 0x18(%r15), %rax
movq %rax, 0x18(%r13)
movq 0x40(%rsp), %rdi
cmpq %rdi, 0x48(%rsp)
je 0x316cf
movl $0x1, %r15d
xorl %eax, %eax
movq %rbp, %r13
leaq (%rax,%rax,4), %rax
movups (%rdi,%rax,8), %xmm0
movups 0x10(%rdi,%rax,8), %xmm1
movaps %xmm0, 0x70(%rsp)
movq 0x20(%rdi,%rax,8), %rax
movq %rax, 0x90(%rsp)
movaps %xmm1, 0x80(%rsp)
cmpl %r14d, 0x74(%rsp)
jne 0x316ad
movq %r12, %rdi
movq %r13, %rsi
callq 0x50b68
movl %r15d, %eax
movq 0x40(%rsp), %rdi
movq 0x48(%rsp), %rcx
subq %rdi, %rcx
sarq $0x3, %rcx
imulq %rbx, %rcx
incl %r15d
cmpq %rax, %rcx
ja 0x31674
jmp 0x316d2
movq %rbp, %r13
testq %rdi, %rdi
movq 0x18(%rsp), %r14
je 0x316e9
movq 0x50(%rsp), %rsi
subq %rdi, %rsi
callq 0x4470
movl %r14d, %esi
movq 0x8(%rsp), %rcx
movq (%rcx), %rax
movq 0x8(%rcx), %rdx
subq %rax, %rdx
sarq $0x2, %rdx
leaq -0x1(%rdx), %rcx
cmpq %rsi, %rcx
ja 0x315ce
addq $0x98, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
leaq 0x11df80(%rip), %rdi    # 0x14f6a5
jmp 0x31731
leaq 0x11df77(%rip), %rdi    # 0x14f6a5
movq %r14, %rsi
xorl %eax, %eax
callq 0x4630
movq %rax, %rbx
movq 0x40(%rsp), %rdi
testq %rdi, %rdi
je 0x31752
movq 0x50(%rsp), %rsi
subq %rdi, %rsi
callq 0x4470
movq %rbx, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: PATH::print(std::ostream&)
void PATH::print(ostream &output){
  output << "  "<< "Node lineage: ";
  for(unsigned int i=0; i<visitedNodes.size()-1; i++){
    output << "   " << visitedNodes.at(i).id << " -> ";
  }
  output << "   " << visitedNodes.back().id << "\n"
	   << "  Current node: "   << currentNode.id << "\n"
	 << "  Maximum radius: " << max_radius     << "\n";
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
pushq %rax
movq %rsi, %r14
movq %rdi, %rbx
leaq 0x11dd1d(%rip), %rsi    # 0x14f48f
movl $0x2, %edx
movq %r14, %rdi
callq 0x44e0
leaq 0x121b52(%rip), %rsi    # 0x1532d8
movl $0xe, %edx
movq %r14, %rdi
callq 0x44e0
movq 0x8(%rbx), %rax
subq (%rbx), %rax
cmpq $0x48, %rax
je 0x3182e
movl $0x1, %ebp
xorl %r13d, %r13d
movabsq $-0x71c71c71c71c71c7, %r15 # imm = 0x8E38E38E38E38E39
leaq 0x11eeb7(%rip), %r12    # 0x150674
movl $0x3, %edx
movq %r14, %rdi
leaq 0x11dcc2(%rip), %rsi    # 0x14f48e
callq 0x44e0
movq (%rbx), %rax
movq 0x8(%rbx), %rdx
subq %rax, %rdx
sarq $0x3, %rdx
imulq %r15, %rdx
cmpq %r13, %rdx
jbe 0x318dc
leaq (,%r13,8), %rcx
addq %r13, %rcx
movl (%rax,%rcx,8), %esi
movq %r14, %rdi
callq 0x4750
movl $0x4, %edx
movq %rax, %rdi
movq %r12, %rsi
callq 0x44e0
movl %ebp, %r13d
movq 0x8(%rbx), %rax
subq (%rbx), %rax
sarq $0x3, %rax
imulq %r15, %rax
decq %rax
incl %ebp
cmpq %r13, %rax
ja 0x317bd
leaq 0x11dc59(%rip), %rsi    # 0x14f48e
movl $0x3, %edx
movq %r14, %rdi
callq 0x44e0
movq 0x8(%rbx), %rax
movl -0x48(%rax), %esi
movq %r14, %rdi
callq 0x4750
movq %rax, %r15
leaq 0x123cd3(%rip), %r14    # 0x15552e
movl $0x1, %edx
movq %rax, %rdi
movq %r14, %rsi
callq 0x44e0
leaq 0x121a75(%rip), %rsi    # 0x1532e7
movl $0x10, %edx
movq %r15, %rdi
callq 0x44e0
movl 0x18(%rbx), %esi
movq %r15, %rdi
callq 0x4750
movq %rax, %r15
movl $0x1, %edx
movq %rax, %rdi
movq %r14, %rsi
callq 0x44e0
leaq 0x121a54(%rip), %rsi    # 0x1532f8
movl $0x12, %edx
movq %r15, %rdi
callq 0x44e0
movsd 0x60(%rbx), %xmm0
movq %r15, %rdi
callq 0x46b0
movl $0x1, %edx
movq %rax, %rdi
movq %r14, %rsi
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x44e0
leaq 0x11ddc2(%rip), %rdi    # 0x14f6a5
movq %r13, %rsi
xorl %eax, %eax
callq 0x4630
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: TRAVERSAL_NETWORK::TRAVERSAL_NETWORK(int, int, int, std::vector<int, std::allocator<int>>, std::vector<std::vector<CONN, std::allocator<CONN>>, std::allocator<std::vector<CONN, std::allocator<CONN>>>>, std::vector<std::vector<CONN, std::allocator<CONN>>, std::allocator<std::vector<CONN, std::allocator<CONN>>>>, std::vector<std::vector<CONN, std::allocator<CONN>>, std::allocator<std::vector<CONN, std::allocator<CONN>>>>, DIJKSTRA_NETWORK*)
TRAVERSAL_NETWORK::TRAVERSAL_NETWORK(int dx, int dy, int dz, vector<int> srcIDs, vector< vector<CONN> > regConns, 
				     vector< vector<CONN> > srcConns, vector< vector<CONN> > sinkConns, DIJKSTRA_NETWORK * dnetwork){
  sourceNodeIDs = srcIDs;
  regConnections = regConns;
  connectToSource = srcConns;
  connectToSink = sinkConns;
  direction = DELTA_POS(dx,dy,dz);
  dnet = dnetwork;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x38, %rsp
movq %r9, %r12
movq %r8, %rbp
movl %ecx, 0xc(%rsp)
movl %edx, %r14d
movl %esi, %r15d
movq %rdi, %rbx
leaq 0x18(%rdi), %rax
movq %rax, 0x20(%rsp)
leaq 0x30(%rdi), %rax
movq %rax, 0x18(%rsp)
leaq 0x48(%rdi), %rax
movq %rax, 0x10(%rsp)
leaq 0x60(%rdi), %r13
xorps %xmm0, %xmm0
movups %xmm0, 0x50(%rdi)
movups %xmm0, 0x40(%rdi)
movups %xmm0, 0x30(%rdi)
movups %xmm0, 0x20(%rdi)
movups %xmm0, 0x10(%rdi)
movups %xmm0, (%rdi)
movq %r13, %rdi
xorl %esi, %esi
xorl %edx, %edx
xorl %ecx, %ecx
callq 0x509d8
movq %rbx, %rdi
movq %rbp, %rsi
callq 0x1005e
movq 0x20(%rsp), %rdi
movq %r12, %rsi
callq 0x38174
movq 0x70(%rsp), %rsi
movq 0x18(%rsp), %rdi
callq 0x38174
movq 0x78(%rsp), %rsi
movq 0x10(%rsp), %rdi
callq 0x38174
leaq 0x2c(%rsp), %rdi
movl %r15d, %esi
movl %r14d, %edx
movl 0xc(%rsp), %ecx
callq 0x509d8
movq 0x80(%rsp), %rax
movl 0x34(%rsp), %ecx
movl %ecx, 0x8(%r13)
movq 0x2c(%rsp), %rcx
movq %rcx, (%r13)
movq %rax, 0x70(%rbx)
addq $0x38, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
jmp 0x319dc
movq %rax, %r14
movq 0x10(%rsp), %rdi
callq 0xf0ca
movq 0x18(%rsp), %rdi
callq 0xf0ca
movq 0x20(%rsp), %rdi
callq 0xf0ca
movq (%rbx), %rdi
testq %rdi, %rdi
je 0x31a11
movq 0x10(%rbx), %rsi
subq %rdi, %rsi
callq 0x4470
movq %r14, %rdi
callq 0x4780
nop
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: CAGE::getNodeOffset(int)
DELTA_POS CAGE::getNodeOffset(int nodeID){
  map<int,int>::iterator iter = nodeIndices.find(nodeID);
  if(iter == nodeIndices.end()){
    cerr << "Error: Node #" << nodeID << " not found in cage." << "\n"
	 << "Exiting..." << "\n";
    exit(1);
  }
  else
    return nodeOffsets[iter->second];
}

// Assembly:
pushq %rbx
movl %esi, %ebx
movq 0x10(%rdi), %rdx
leaq 0x8(%rdi), %rax
movq %rax, %rcx
testq %rdx, %rdx
je 0x365e7
movq %rax, %rcx
xorl %esi, %esi
cmpl %ebx, 0x20(%rdx)
setl %sil
cmovgeq %rdx, %rcx
movq 0x10(%rdx,%rsi,8), %rdx
testq %rdx, %rdx
jne 0x365d0
movq %rax, %rdx
cmpq %rax, %rcx
je 0x365f9
cmpl %ebx, 0x20(%rcx)
cmovgq %rax, %rcx
movq %rcx, %rdx
cmpq %rax, %rdx
je 0x36614
movslq 0x24(%rdx), %rax
movq 0x48(%rdi), %rcx
leaq (%rax,%rax,2), %rdx
movq (%rcx,%rdx,4), %rax
movl 0x8(%rcx,%rdx,4), %edx
popq %rbx
retq
movq 0x1609d5(%rip), %rdi    # 0x196ff0
leaq 0x11cdd0(%rip), %rsi    # 0x1533f2
callq 0x4440
movq %rax, %rdi
movl %ebx, %esi
callq 0x4750
leaq 0x11cdc8(%rip), %rsi    # 0x153400
movq %rax, %rdi
callq 0x4440
leaq 0x11eee7(%rip), %rbx    # 0x15552e
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
leaq 0x11ff59(%rip), %rsi    # 0x1565b2
movq %rax, %rdi
callq 0x4440
movq %rax, %rdi
movq %rbx, %rsi
callq 0x4440
movl $0x1, %edi
callq 0x710c
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/networkanalysis.cc
// Function: CAGE::writeToVMD(int, std::basic_fstream<char, std::char_traits<char>>&)
void CAGE::writeToVMD(int cageIndex, fstream &output){
  output << "set cages(" << cageIndex << ") {" << "\n"
	 << "{color $cageColors(" << cageIndex << ")}" << "\n"
	 << "{sphere {" << cx << " " << cy << " " << cz << "} radius " << radius << " resolution 100 }" << "\n"
	 <<"}" << "\n";
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r12
pushq %rbx
movl %esi, %ebp
movq %rdi, %r14
leaq 0x10(%rdx), %rbx
leaq 0x11cd50(%rip), %rsi    # 0x153414
movl $0xa, %edx
movq %rbx, %rdi
callq 0x44e0
movq %rbx, %rdi
movl %ebp, %esi
callq 0x4750
movq %rax, %r15
leaq 0x11fc43(%rip), %rsi    # 0x156328
movl $0x3, %edx
movq %rax, %rdi
callq 0x44e0
leaq 0x11ee35(%rip), %rbx    # 0x15552e
movl $0x1, %edx
movq %r15, %rdi
movq %rbx, %rsi
callq 0x44e0
leaq 0x11cd0f(%rip), %rsi    # 0x15341f
movl $0x13, %edx
movq %r15, %rdi
callq 0x44e0
movq %r15, %rdi
movl %ebp, %esi
callq 0x4750
movq %rax, %r15
leaq 0x11fc13(%rip), %rsi    # 0x156344
movl $0x2, %edx
movq %rax, %rdi
callq 0x44e0
movl $0x1, %edx
movq %r15, %rdi
movq %rbx, %rsi
callq 0x44e0
leaq 0x11ccde(%rip), %rsi    # 0x153433
movl $0x9, %edx
movq %r15, %rdi
callq 0x44e0
movsd 0x60(%r14), %xmm0
movq %r15, %rdi
callq 0x46b0
movq %rax, %r15
leaq 0x120d0c(%rip), %r12    # 0x157486
movl $0x1, %edx
movq %rax, %rdi
movq %r12, %rsi
callq 0x44e0
movsd 0x68(%r14), %xmm0
movq %r15, %rdi
callq 0x46b0
movq %rax, %r15
movl $0x1, %edx
movq %rax, %rdi
movq %r12, %rsi
callq 0x44e0
movsd 0x70(%r14), %xmm0
movq %r15, %rdi
callq 0x46b0
movq %rax, %r15
leaq 0x11cc7a(%rip), %rsi    # 0x15343d
movl $0x9, %edx
movq %rax, %rdi
callq 0x44e0
movsd 0x78(%r14), %xmm0
movq %r15, %rdi
callq 0x46b0
movq %rax, %r14
leaq 0x11cc5f(%rip), %rsi    # 0x153447
movl $0x11, %edx
movq %rax, %rdi
callq 0x44e0
movl $0x1, %edx
movq %r14, %rdi
movq %rbx, %rsi
callq 0x44e0
leaq 0x11fa82(%rip), %rsi    # 0x15628e
movl $0x1, %edx
movq %r14, %rdi
callq 0x44e0
movl $0x1, %edx
movq %r14, %rdi
movq %rbx, %rsi
popq %rbx
popq %r12
popq %r14
popq %r15
popq %rbp
jmp 0x44e0
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/./heap.h
// Function: HEAP<PATH>::pop()
T pop(){
    std::pop_heap(elements.begin(), elements.end(), comparator);
    T most = elements.back();
    elements.pop_back();
    return most;
  }

// Assembly:
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x10, %rsp
movq %rsi, %r14
movq %rdi, %rbx
movq (%rsi), %rdi
movq 0x8(%rsi), %rdx
movq %rdx, %rax
subq %rdi, %rax
cmpq $0xc9, %rax
jl 0x38529
movq 0x18(%r14), %rax
leaq 0x8(%rsp), %rcx
movq %rax, (%rcx)
addq $-0xc8, %rdx
movq %rdx, %rsi
callq 0x3a743
movq 0x8(%r14), %r12
leaq -0xc8(%r12), %rsi
movq %rbx, %rdi
callq 0x38ec6
movups -0xb0(%r12), %xmm0
movups -0xa0(%r12), %xmm1
movups %xmm1, 0x28(%rbx)
movups %xmm0, 0x18(%rbx)
leaq 0x38(%rbx), %r15
leaq -0x90(%r12), %rsi
movq %r15, %rdi
callq 0x38318
movb -0x70(%r12), %al
movb %al, 0x58(%rbx)
movq -0x78(%r12), %rax
movq %rax, 0x50(%rbx)
movups -0x68(%r12), %xmm0
movups -0x5f(%r12), %xmm1
movups %xmm0, 0x60(%rbx)
movups %xmm1, 0x69(%rbx)
leaq 0x80(%rbx), %r13
leaq -0x48(%r12), %rsi
movq %r13, %rdi
callq 0xe886
leaq 0x98(%rbx), %rdi
addq $-0x30, %r12
movq %r12, %rsi
callq 0x11076
movq $-0xc8, %rsi
addq 0x8(%r14), %rsi
movq %rsi, 0x8(%r14)
movq %r14, %rdi
callq 0x3a298
movq %rbx, %rax
addq $0x10, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
retq
movq %rax, %r14
movq (%r13), %rdi
testq %rdi, %rdi
je 0x385ff
movq 0x90(%rbx), %rsi
subq %rdi, %rsi
callq 0x4470
jmp 0x385ff
movq %rax, %r14
movq (%r15), %rdi
testq %rdi, %rdi
je 0x38618
movq 0x48(%rbx), %rsi
subq %rdi, %rsi
callq 0x4470
jmp 0x38618
movq %rax, %r14
movq %rbx, %rdi
callq 0xf07c
movq %r14, %rdi
callq 0x4780
// File: /workspace/github_cpp_makefile_star2_O1/Luthaf[P]zeopp/area_and_volume.cc
// Function: calcDensity(ATOM_NETWORK*)
double calcDensity(ATOM_NETWORK *atmnet){
  double volume = calcDeterminant(atmnet->ucVectors); // Units of A^3
  vector<ATOM>::iterator iter = atmnet->atoms.begin();
  double massSum = 0;
  while(iter != atmnet->atoms.end()){
    massSum += iter->mass; 
    iter++;
  }
  return  massSum/(AVOGRADOS_NUMBER*volume)*1.0e24; // Units of g/cm^3
}

// Assembly:
pushq %rbx
movq %rdi, %rbx
addq $0x80, %rdi
callq 0x84ffd
movq 0x2f0(%rbx), %rax
movq 0x2f8(%rbx), %rcx
xorpd %xmm1, %xmm1
cmpq %rcx, %rax
je 0x3c9fc
addsd 0x38(%rax), %xmm1
addq $0x98, %rax
jmp 0x3c9ea
mulsd 0x116b4c(%rip), %xmm0   # 0x153550
divsd %xmm0, %xmm1
mulsd 0x116b48(%rip), %xmm1   # 0x153558
movapd %xmm1, %xmm0
popq %rbx
retq