// File: /workspace/github_c_makefile_star2_O3/icebert[P]pblat/jkOwnLib/genoFind.c
// Function: gfPcrClumps
struct gfClump *gfPcrClumps(struct genoFind *gf, char *fPrimer, int fPrimerSize, 
	char *rPrimer, int rPrimerSize, int minDistance, int maxDistance)
/* Find possible PCR hits.  The fPrimer and rPrimer are on opposite strands. */
{
struct gfClump *clumpList;
if (gf->segSize > 0)
    errAbort("Can't do PCR on large tile sizes");
if (gf->isPep)
    errAbort("Can't do PCR on protein/translated index");
tolowers(fPrimer);
tolowers(rPrimer);
reverseComplement(rPrimer, rPrimerSize);
clumpList = pcrClumps(gf, fPrimer, fPrimerSize, rPrimer, rPrimerSize, 
	minDistance, maxDistance);
reverseComplement(rPrimer, rPrimerSize);
return clumpList;
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0xb8, %rsp
movl %r9d, %r14d
movl %r8d, %ebp
movq %rcx, 0x8(%rsp)
movl %edx, %ebx
movq %rsi, 0x20(%rsp)
movq %rdi, %r12
cmpl $0x0, 0x2c(%rdi)
jle 0xf459
leaq 0x7e76f(%rip), %rdi     # 0x8dbc1
xorl %eax, %eax
callq 0x26e94
movl %r14d, 0x4(%rsp)
cmpb $0x0, 0x28(%r12)
je 0xf474
leaq 0x7e775(%rip), %rdi     # 0x8dbe2
xorl %eax, %eax
callq 0x26e94
movq 0x20(%rsp), %rdi
callq 0x22305
movq 0x8(%rsp), %r14
movq %r14, %rdi
callq 0x22305
movslq %ebp, %r15
movq %r14, %rdi
movq %r15, %rsi
callq 0x25423
movq %r12, 0x50(%rsp)
movl 0xc(%r12), %eax
subl %eax, %ebx
movq %r15, 0x68(%rsp)
movl %r15d, %ebp
movq %rax, 0x10(%rsp)
subl %eax, %ebp
xorl %edi, %edi
movl $0x1, %esi
callq 0x294ea
movq %rax, 0x30(%rsp)
movq %rax, 0xa8(%rsp)
movslq %ebp, %r14
leaq (,%r14,4), %rdi
callq 0x2de63
movq %rax, 0x18(%rsp)
movq %rax, 0xb0(%rsp)
movl %ebp, 0x44(%rsp)
movl %ebp, %eax
movq %rax, 0x48(%rsp)
testl %r14d, %r14d
jle 0xf581
leaq 0xb048b(%rip), %r15     # 0xbf990
leaq 0x7e882(%rip), %r14     # 0x8dd8e
movq 0x8(%rsp), %r12
xorl %r13d, %r13d
cmpl $0x0, 0x10(%rsp)
jle 0xf549
xorl %eax, %eax
xorl %ecx, %ecx
movsbq (%r12,%rax), %rdx
movl (%r15,%rdx,4), %edx
testl %edx, %edx
js 0xf558
leal (%rdx,%rcx,4), %ecx
incq %rax
cmpq %rax, 0x10(%rsp)
jne 0xf51f
movq 0x18(%rsp), %rax
movl %ecx, (%rax,%r13,4)
cmpl $-0x1, %ecx
jne 0xf574
jmp 0xf565
movq 0x18(%rsp), %rax
movl $0x0, (%rax,%r13,4)
jmp 0xf574
movq 0x18(%rsp), %rax
movl $0xffffffff, (%rax,%r13,4) # imm = 0xFFFFFFFF
movq %r14, %rdi
movq 0x8(%rsp), %rsi
xorl %eax, %eax
callq 0x26e94
incq %r13
incq %r12
cmpq 0x48(%rsp), %r13
jne 0xf514
testl %ebx, %ebx
movl 0x4(%rsp), %r15d
movq 0x50(%rsp), %r12
jle 0xf7f1
movl 0xf0(%rsp), %r13d
movl %ebx, %eax
movq %rax, 0x70(%rsp)
xorl %eax, %eax
movq %rax, 0x78(%rsp)
movl $0x0, %eax
cmpl $0x0, 0x10(%rsp)
jle 0xf5ea
xorl %ecx, %ecx
xorl %eax, %eax
movq 0x20(%rsp), %rdx
movsbq (%rdx,%rcx), %rdx
leaq 0xb03c6(%rip), %rsi     # 0xbf990
movl (%rsi,%rdx,4), %edx
testl %edx, %edx
js 0xf7d9
leal (%rdx,%rax,4), %eax
incq %rcx
cmpq %rcx, 0x10(%rsp)
jne 0xf5b9
testl %eax, %eax
js 0xf7d9
movl %eax, %eax
movq 0x38(%r12), %rcx
movslq (%rcx,%rax,4), %rcx
movq %rcx, 0x88(%rsp)
testq %rcx, %rcx
jle 0xf7d9
movq 0x48(%r12), %rcx
movq (%rcx,%rax,8), %rax
movq %rax, 0x80(%rsp)
movq $0x0, 0x28(%rsp)
cmpl $0x0, 0x44(%rsp)
jle 0xf7be
movq 0x80(%rsp), %rax
movq 0x28(%rsp), %rcx
movl (%rax,%rcx,4), %edx
xorl %ecx, %ecx
movl %edx, (%rsp)
movq 0x18(%rsp), %rax
movq %rcx, 0x90(%rsp)
movslq (%rax,%rcx,4), %rax
movq 0x38(%r12), %rcx
movslq (%rcx,%rax,4), %rsi
testq %rsi, %rsi
jle 0xf7a8
movq 0x48(%r12), %rcx
movq (%rcx,%rax,8), %rdi
xorl %ebp, %ebp
movq %rsi, 0x60(%rsp)
movq %rdi, 0x58(%rsp)
movl (%rdi,%rbp,4), %r14d
movl %r14d, %eax
subl %edx, %eax
jbe 0xf79c
cmpl %r15d, %eax
setl %cl
cmpl %r13d, %eax
setg %al
orb %cl, %al
jne 0xf79c
movl 0x1c(%r12), %edi
movq 0x20(%r12), %rsi
movl (%rsp), %edx
callq 0xf961
movq 0x58(%rsp), %rdi
movq 0x60(%rsp), %rsi
movl (%rsp), %edx
cmpl 0x1c(%rax), %r14d
jae 0xf79c
movq %rax, %rbx
movq 0x8(%rax), %r15
testq %r15, %r15
jne 0xf6d8
movq 0x10(%rbx), %rax
movq 0x8(%rax), %r15
movl 0x18(%rbx), %r12d
movq 0x30(%rsp), %rdi
movq %r15, %rsi
callq 0x293ad
movq %rax, %r13
testq %rax, %rax
jne 0xf711
movl 0x1c(%rbx), %esi
subl %r12d, %esi
xorl %edi, %edi
callq 0x1c35f
movq %rax, %r13
movq 0x30(%rsp), %rdi
movq %r15, %rsi
movq %rax, %rdx
callq 0x29142
movl (%rsp), %r15d
subl %r12d, %r15d
subl %r12d, %r14d
movq %r13, %rdi
movl %r15d, %esi
movl %r14d, %edx
callq 0x1c52e
movq %rax, 0x38(%rsp)
testq %rax, %rax
je 0xf762
movq %rax, %r12
movl 0x8(%r12), %esi
cmpl %r15d, %esi
cmovll %esi, %r15d
movl 0xc(%r12), %edx
cmpl %r14d, %edx
cmovgl %edx, %r14d
movq %r13, %rdi
movq %rbx, %rcx
callq 0x1c945
movq (%r12), %r12
testq %r12, %r12
jne 0xf736
leaq 0x38(%rsp), %rdi
callq 0x20196
movq %r13, %rdi
movl %r15d, %esi
movl %r14d, %edx
movq %rbx, %rcx
callq 0x1c47e
movl 0x4(%rsp), %r15d
movq 0x50(%rsp), %r12
movl 0xf0(%rsp), %r13d
movl (%rsp), %edx
movq 0x60(%rsp), %rsi
movq 0x58(%rsp), %rdi
incq %rbp
cmpq %rsi, %rbp
jne 0xf678
movq 0x90(%rsp), %rcx
incq %rcx
cmpq 0x48(%rsp), %rcx
jne 0xf640
movq 0x28(%rsp), %rcx
incq %rcx
movq %rcx, 0x28(%rsp)
cmpq 0x88(%rsp), %rcx
jne 0xf620
movq 0x78(%rsp), %rax
incq %rax
incq 0x20(%rsp)
cmpq 0x70(%rsp), %rax
jne 0xf5a4
movq 0x30(%rsp), %rdi
callq 0x29786
movq %rax, 0x38(%rsp)
testq %rax, %rax
je 0xf890
movq %rax, %rbx
xorl %ebp, %ebp
leaq 0x98(%rsp), %r14
leaq 0xa0(%rsp), %r15
movq 0x10(%rbx), %rdi
movq %rdi, 0xa0(%rsp)
callq 0x1c81a
movq %rax, 0x98(%rsp)
testq %rax, %rax
je 0xf870
movq %rax, %r13
movl $0x38, %edi
callq 0x2dff4
movq %rax, %r12
movq 0x10(%r13), %rax
movq %rax, 0x10(%r12)
movq 0x8(%r13), %rax
movq %rax, 0x18(%r12)
movq %rbp, (%r12)
movq (%r13), %r13
movq %r12, %rbp
testq %r13, %r13
jne 0xf83f
jmp 0xf873
movq %rbp, %r12
movq %r14, %rdi
callq 0x20196
movq %r15, %rdi
callq 0x1c41a
movq (%rbx), %rbx
movq %r12, %rbp
testq %rbx, %rbx
jne 0xf81e
jmp 0xf893
xorl %r12d, %r12d
leaq 0x38(%rsp), %rdi
callq 0x297e7
leaq 0xa8(%rsp), %rdi
callq 0x298bd
leaq 0xb0(%rsp), %rdi
callq 0x2e0b0
movq 0x8(%rsp), %rdi
movq 0x68(%rsp), %rsi
callq 0x25423
movq %r12, %rax
addq $0xb8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq