// File: /workspace/github_cpp_makefile_star2_O1/ncbi[P]amr/alignment.cpp
// Function: Alignment_sp::Alignment::getGlobalTargetStart() const
long Alignment::getGlobalTargetStart () const
{ 
  ASSERT (! targetProt);
  ASSERT (refProt);
  return targetStrand
           ? (long) targetStart - 3 * (long) refStart
           : (long) targetEnd   + 3 * (long) refStart; 
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x108, %rsp            # imm = 0x108
movq %rdi, %rbx
callq 0xb070
movl $0x0, (%rax)
cmpb $0x1, 0x8(%rbx)
je 0x67a59
movl $0x0, (%rax)
cmpb $0x0, 0x70(%rbx)
je 0x67af8
movzbl 0x68(%rbx), %eax
movl %eax, %ecx
xorl $0x1, %ecx
testl %eax, %eax
movq $-0x3, %rdx
movl $0x3, %eax
cmovneq %rdx, %rax
imulq 0xb8(%rbx), %rax
addq 0x50(%rbx,%rcx,8), %rax
addq $0x108, %rsp            # imm = 0x108
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0xb6b0
testl %eax, %eax
jne 0x67b97
leaq 0x98(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x2f5af(%rip), %rsi     # 0x97028
leaq 0x2f5be(%rip), %rdx     # 0x9703e
leaq 0x88(%rsp), %rdi
callq 0xdc76
leaq 0xa8(%rsp), %rdi
movl $0x3ed, %esi            # imm = 0x3ED
callq 0xe1a8
leaq 0xc8(%rsp), %rdi
leaq 0x88(%rsp), %rsi
leaq 0xa8(%rsp), %rdx
callq 0xe100
leaq 0x2b70e(%rip), %rsi     # 0x931d1
leaq 0xc8(%rsp), %rdi
callq 0xbb10
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x67ba1
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x67bae
callq 0xb6b0
testl %eax, %eax
jne 0x67b97
leaq 0x98(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x2f510(%rip), %rsi     # 0x97028
leaq 0x2f51f(%rip), %rdx     # 0x9703e
leaq 0x88(%rsp), %rdi
callq 0xdc76
leaq 0xa8(%rsp), %rdi
movl $0x3ee, %esi            # imm = 0x3EE
callq 0xe1a8
leaq 0xc8(%rsp), %rdi
leaq 0x88(%rsp), %rsi
leaq 0xa8(%rsp), %rdx
callq 0xe100
leaq 0x2b66f(%rip), %rsi     # 0x931d1
leaq 0xc8(%rsp), %rdi
callq 0xbb10
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x67c22
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x67c2f
movl $0x1, %edi
callq 0xb6d0
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x10(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x78(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x3011c(%rip), %rsi     # 0x97cf3
leaq 0x3014f(%rip), %rdx     # 0x97d2d
leaq 0x68(%rsp), %rdi
callq 0xdc76
leaq 0x2bcc2(%rip), %rsi     # 0x938b1
leaq 0x68(%rsp), %rdi
callq 0xbb10
leaq 0x38(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x67c9c
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x67ca9
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x10(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x78(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x3009b(%rip), %rsi     # 0x97cf3
leaq 0x300ce(%rip), %rdx     # 0x97d2d
leaq 0x68(%rsp), %rdi
callq 0xdc76
leaq 0x2bc41(%rip), %rsi     # 0x938b1
leaq 0x68(%rsp), %rdi
callq 0xbb10
leaq 0x38(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x67d0c
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x67d19
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rsi
leaq 0x28(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0xe8(%rsp), %rdi
leaq 0x8(%rsp), %rsi
callq 0xe100
leaq 0x30050(%rip), %rsi     # 0x97d2e
leaq 0xe8(%rsp), %rdi
callq 0xbb10
leaq 0x58(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x67d7c
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x67d89
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rsi
leaq 0x28(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0xe8(%rsp), %rdi
leaq 0x8(%rsp), %rsi
callq 0xe100
leaq 0x2ff28(%rip), %rsi     # 0x97c76
leaq 0xe8(%rsp), %rdi
callq 0xbb10
leaq 0x58(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x67daa
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x67db7
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
leaq 0x48(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x1151b
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
leaq 0x48(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x1151b
jmp 0x67ddc
jmp 0x67df8
movq %rax, %rbx
movq 0x48(%rsp), %rdi
cmpq %rbp, %rdi
je 0x67dfb
movq 0x58(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67dfb
movq %rax, %rbx
leaq 0xf8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x67e23
movq 0xf8(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67e23
jmp 0x67e20
movq %rax, %rbx
movq 0x28(%rsp), %rdi
cmpq %r13, %rdi
je 0x67e41
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67e41
jmp 0x67e3e
movq %rax, %rbx
movq 0x68(%rsp), %rdi
cmpq %r12, %rdi
je 0x67e5f
movq 0x78(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67e5f
jmp 0x67e5c
movq %rax, %rbx
movq 0x8(%rsp), %rdi
cmpq %r15, %rdi
je 0x67e7d
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67e7d
jmp 0x67e7a
movq %rax, %rbx
leaq 0xd8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x67ea5
movq 0xd8(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67ea5
jmp 0x67ea2
movq %rax, %rbx
leaq 0xb8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x67ecd
movq 0xb8(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67ecd
jmp 0x67eca
movq %rax, %rbx
movq 0x88(%rsp), %rdi
cmpq %r14, %rdi
je 0x67ef1
movq 0x98(%rsp), %rsi
incq %rsi
callq 0xb5a0
jmp 0x67ef1
jmp 0x67eee
movq %rax, %rbx
movq %rbx, %rdi
callq 0xba60