// File: /workspace/github_cpp_makefile_star2_O1/ncbi[P]amr/amr_report.cpp
// Function: (anonymous namespace)::Batch::setStopCodon((anonymous namespace)::BlastAlignment&)
void setStopCodon (BlastAlignment &blastAlP)
    { 
      ASSERT (blastAlP. targetProt);
      for (const Locus& cds : blastAlP. cdss)
        if (const VectorPtr<BlastAlignment>* blastAlsX = findPtr (target2blastAls, cds. contig))
          for (const BlastAlignment* blastAlX : *blastAlsX)
            if (   ! blastAlX->targetProt 
                && blastAlX->stopCodon
                && blastAlP. better (*blastAlX)
               )
              blastAlP. stopCodon = true;
    }

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x108, %rsp            # imm = 0x108
movq %rsi, %rbx
movq %rdi, %r14
callq 0xb070
movl $0x0, (%rax)
cmpb $0x0, 0x8(%rbx)
je 0x2fbaf
movq 0x3b8(%rbx), %r15
movq 0x3c0(%rbx), %r12
cmpq %r12, %r15
je 0x2fb9d
addq $0xf0, %r14
leaq 0x8(%r15), %rsi
movq %r14, %rdi
callq 0x24f03
testq %rax, %rax
je 0x2fb91
movq (%rax), %r13
movq 0x8(%rax), %rbp
cmpq %rbp, %r13
je 0x2fb91
movq (%r13), %rsi
cmpb $0x0, 0x8(%rsi)
jne 0x2fb8b
cmpb $0x1, 0x249(%rsi)
jne 0x2fb8b
movq %rbx, %rdi
callq 0x30d14
testb %al, %al
je 0x2fb8b
movb $0x1, 0x249(%rbx)
addq $0x8, %r13
jmp 0x2fb60
addq $0x90, %r15
cmpq %r12, %r15
jne 0x2fb48
addq $0x108, %rsp            # imm = 0x108
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0xb660
testl %eax, %eax
jne 0x2fc47
leaq 0x98(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x73d58(%rip), %rsi     # 0xa3927
leaq 0x73d68(%rip), %rdx     # 0xa393e
leaq 0x88(%rsp), %rdi
callq 0x39720
leaq 0xa8(%rsp), %rdi
movl $0x671, %esi            # imm = 0x671
callq 0x39da6
leaq 0xc8(%rsp), %rdi
leaq 0x88(%rsp), %rsi
leaq 0xa8(%rsp), %rdx
callq 0x39cfe
leaq 0x73d26(%rip), %rsi     # 0xa393f
leaq 0xc8(%rsp), %rdi
callq 0xba70
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x2fc51
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x2fc5e
movl $0x1, %edi
callq 0xb670
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x10(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x78(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x74fe9(%rip), %rsi     # 0xa4c70
leaq 0x75023(%rip), %rdx     # 0xa4cb1
leaq 0x68(%rsp), %rdi
callq 0x39720
leaq 0x74171(%rip), %rsi     # 0xa3e10
leaq 0x68(%rsp), %rdi
callq 0xba70
leaq 0x38(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x2fccb
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x2fcd8
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rsi
leaq 0x28(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0xe8(%rsp), %rdi
leaq 0x8(%rsp), %rsi
callq 0x39cfe
leaq 0x74fa5(%rip), %rsi     # 0xa4cb2
leaq 0xe8(%rsp), %rdi
callq 0xba70
leaq 0x58(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x2fd3b
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x2fd48
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
leaq 0x48(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x43ebb
movq %rax, %rbx
movq 0x48(%rsp), %rdi
cmpq %rbp, %rdi
je 0x2fd88
movq 0x58(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fd88
movq %rax, %rbx
leaq 0xf8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x2fdae
movq 0xf8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fdae
movq %rax, %rbx
movq 0x28(%rsp), %rdi
cmpq %r13, %rdi
je 0x2fdca
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fdca
movq %rax, %rbx
movq 0x68(%rsp), %rdi
cmpq %r12, %rdi
je 0x2fde6
movq 0x78(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fde6
movq %rax, %rbx
movq 0x8(%rsp), %rdi
cmpq %r15, %rdi
je 0x2fe02
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fe02
movq %rax, %rbx
leaq 0xd8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x2fe28
movq 0xd8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fe28
movq %rax, %rbx
leaq 0xb8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x2fe4e
movq 0xb8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x2fe4e
movq %rax, %rbx
movq 0x88(%rsp), %rdi
cmpq %r14, %rdi
je 0x2fe6b
movq 0x98(%rsp), %rsi
incq %rsi
callq 0xb550
movq %rbx, %rdi
callq 0xb9c0
nop