// File: /workspace/github_c_makefile_star2_O2/genometools[P]genometools/src/tools/gt_encseq_decode.c
// Function: gt_encseq_decode_option_parser_new
static GtOptionParser* gt_encseq_decode_option_parser_new(void *tool_arguments)
{
  GtOptionParser *op;
  GtOption *option,
           *optionsep,
           *optionseq,
           *optionseqrange,
           *optionmode;
  GtEncseqDecodeArguments *arguments =
                                      (GtEncseqDecodeArguments*) tool_arguments;
  static const char *modes[] = {"fasta", "concat", NULL};

  /* init */
  op = gt_option_parser_new("(sequence_file|indexname)",
                            "Decode/extract encoded sequences.");

  /* encseq options */
  arguments->eopts = gt_encseq_options_register_loading(op, NULL);
  gt_encseq_options_add_readmode_option(op, arguments->dir);

  /* -singlechars */
  option = gt_option_new_bool("singlechars",
                              "do not use a GtEncseqReader but access each "
                              "sequence character separately",
                              &arguments->singlechars,
                              false);
  gt_option_is_extended_option(option);
  gt_option_parser_add_option(op, option);

  /* -seq */
  optionseq = gt_option_new_uword("seq",
                                  "extract sequence identified by its number",
                                  &arguments->seq,
                                  GT_UNDEF_UWORD);
  gt_option_parser_add_option(op, optionseq);

  /* -seqrange */
  optionseqrange = gt_option_new_range("seqrange",
                                       "extract multiple consecutive sequences",
                                       &arguments->seqrng,
                                       NULL);
  gt_option_parser_add_option(op, optionseqrange);
  gt_option_exclude(optionseqrange, optionseq);

  /* -output */
  optionmode = gt_option_new_choice("output",
                                    "specify output format "
                                    "(choose from fasta|concat)",
                                    arguments->mode,
                                    modes[0],
                                    modes);
  gt_option_parser_add_option(op, optionmode);

  /* -range */
  option = gt_option_new_range("range",
                               "concatenated range to extract "
                               "(implies '-output concat')",
                               &arguments->rng,
                               NULL);
  gt_option_parser_add_option(op, option);
  gt_option_imply(option, optionmode);

  /* -sepchar */
  optionsep = gt_option_new_string("sepchar",
                                   "specify character to print as GT_SEPARATOR",
                                   arguments->sepchar, "|");
  gt_option_parser_add_option(op, optionsep);
  gt_option_imply(optionsep, optionmode);

  gt_option_parser_set_min_max_args(op, 1, 1);

  return op;
}

// Assembly:
pushq %r15
pushq %r14
pushq %r12
pushq %rbx
pushq %rax
movq %rdi, %r14
leaq 0x2c56d8(%rip), %rdi    # 0x2eb460
leaq 0x2c56eb(%rip), %rsi    # 0x2eb47a
callq 0x97df5
movq %rax, %rbx
movq %rax, %rdi
xorl %esi, %esi
callq 0x88f82
movq %rax, 0x38(%r14)
movq 0x48(%r14), %rsi
movq %rbx, %rdi
callq 0x88fcd
leaq 0x2c56e4(%rip), %rdi    # 0x2eb49c
leaq 0x2c56e9(%rip), %rsi    # 0x2eb4a8
movq %r14, %rdx
xorl %ecx, %ecx
callq 0x9a997
movq %rax, %r15
movq %rax, %rdi
callq 0x9b0c7
movq %rbx, %rdi
movq %r15, %rsi
callq 0x97f31
leaq 0x50(%r14), %rdx
leaq 0x2cd310(%rip), %rdi    # 0x2f30fa
leaq 0x2c3111(%rip), %rsi    # 0x2e8f02
pushq $-0x1
popq %rcx
callq 0x9a9e6
movq %rax, %r15
movq %rbx, %rdi
movq %rax, %rsi
callq 0x97f31
leaq 0x28(%r14), %rdx
leaq 0x2f3845(%rip), %rdi    # 0x319657
leaq 0x2c56d9(%rip), %rsi    # 0x2eb4f2
xorl %ecx, %ecx
callq 0x9aca4
movq %rax, %r12
movq %rbx, %rdi
movq %rax, %rsi
callq 0x97f31
movq %r12, %rdi
movq %r15, %rsi
callq 0x9b38d
movq 0x8(%r14), %rdx
movq 0x4129ac(%rip), %rcx    # 0x4387f0
leaq 0x4129a5(%rip), %r8     # 0x4387f0
leaq 0x2e64b5(%rip), %rdi    # 0x30c307
leaq 0x2c318f(%rip), %rsi    # 0x2e8fe8
callq 0x9ad83
movq %rax, %r15
movq %rbx, %rdi
movq %rax, %rsi
callq 0x97f31
leaq 0x18(%r14), %rdx
leaq 0x2f79dd(%rip), %rdi    # 0x31d854
leaq 0x2c569b(%rip), %rsi    # 0x2eb519
xorl %ecx, %ecx
callq 0x9aca4
movq %rax, %r12
movq %rbx, %rdi
movq %rax, %rsi
callq 0x97f31
movq %r12, %rdi
movq %r15, %rsi
callq 0x9b14d
movq 0x10(%r14), %rdx
leaq 0x2c3170(%rip), %rdi    # 0x2e9019
leaq 0x2c56a2(%rip), %rsi    # 0x2eb552
leaq 0x2f5df2(%rip), %rcx    # 0x31bca9
callq 0x9ad12
movq %rax, %r14
movq %rbx, %rdi
movq %rax, %rsi
callq 0x97f31
movq %r14, %rdi
movq %r15, %rsi
callq 0x9b14d
pushq $0x1
popq %rdx
movq %rbx, %rdi
movl %edx, %esi
callq 0x98c6b
movq %rbx, %rax
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r14
popq %r15
retq