// File: /workspace/github_c_makefile_star2_O0/genometools[P]genometools/src/tools/gt_encseq_check.c
// Function: gt_encseq_check_option_parser_new
static GtOptionParser* gt_encseq_check_option_parser_new(void *tool_arguments)
{
  GtEncseqCheckArguments *arguments = tool_arguments;
  GtOptionParser *op;
  GT_UNUSED GtOption *option;
  gt_assert(arguments);

  /* init */
  op = gt_option_parser_new("[option ...] [file]",
                            "Check the consistency of an encoded "
                            "sequence file.");

  option = gt_option_new_uword("scantrials", "specify number of scan trials",
                               &arguments->scantrials, 0);
  gt_option_parser_add_option(op, option);

  option = gt_option_new_uword("multicharcmptrials",
                               "specify number of multicharacter trials",
                               &arguments->multicharcmptrials, 0);
  gt_option_parser_add_option(op, option);

  option = gt_option_new_uword_min_max("prefixlength",
                                       "prefix length",
                                       &arguments->prefixlength, 0,
                                       0, 32);
  gt_option_parser_add_option(op, option);

  option = gt_option_new_bool("nocheckunit","do not run checkextractunitatpos",
                              &arguments->nocheckunit, false);
  gt_option_parser_add_option(op, option);

  option = gt_option_new_bool("mirrored","use mirrored encseq",
                              &arguments->mirror, false);
  gt_option_parser_add_option(op, option);

  option = gt_option_new_verbose(&arguments->verbose);
  gt_option_parser_add_option(op, option);

  gt_option_parser_set_min_args(op, 1);

  return op;
}

// Assembly:
subq $0x28, %rsp
movq %rdi, 0x20(%rsp)
movq 0x20(%rsp), %rax
movq %rax, 0x18(%rsp)
cmpq $0x0, 0x18(%rsp)
jne 0x2f4c3
movq 0x60cb0e(%rip), %rax    # 0x63bfa0
movq (%rax), %rdi
leaq 0x4e6b77(%rip), %rsi    # 0x516013
leaq 0x54b6bc(%rip), %rdx    # 0x57ab5f
leaq 0x4ecded(%rip), %rcx    # 0x51c297
leaq 0x4ecdca(%rip), %r8     # 0x51c27b
movl $0x35, %r9d
movb $0x0, %al
callq 0x199f0
callq 0x19370
jmp 0x2f4c5
leaq 0x4ec22e(%rip), %rdi    # 0x51b6fa
leaq 0x4ecde6(%rip), %rsi    # 0x51c2b9
callq 0xf1420
movq %rax, 0x10(%rsp)
movq 0x18(%rsp), %rdx
leaq 0x4ece03(%rip), %rdi    # 0x51c2ec
leaq 0x4ece07(%rip), %rsi    # 0x51c2f7
xorl %eax, %eax
movl %eax, %ecx
callq 0xf5fe0
movq %rax, 0x8(%rsp)
movq 0x10(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0xf1600
movq 0x18(%rsp), %rdx
addq $0x8, %rdx
leaq 0x4ecdf8(%rip), %rdi    # 0x51c315
leaq 0x4ece04(%rip), %rsi    # 0x51c328
xorl %eax, %eax
movl %eax, %ecx
callq 0xf5fe0
movq %rax, 0x8(%rsp)
movq 0x10(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0xf1600
movq 0x18(%rsp), %rdx
addq $0x10, %rdx
leaq 0x5426d5(%rip), %rdi    # 0x571c26
leaq 0x4ecdf8(%rip), %rsi    # 0x51c350
xorl %eax, %eax
movl %eax, %r8d
movl $0x20, %r9d
movq %r8, %rcx
callq 0xf6710
movq %rax, 0x8(%rsp)
movq 0x10(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0xf1600
movq 0x18(%rsp), %rdx
addq $0x1a, %rdx
leaq 0x4ecdcf(%rip), %rdi    # 0x51c35e
leaq 0x4ecdd4(%rip), %rsi    # 0x51c36a
xorl %ecx, %ecx
callq 0xf5f20
movq %rax, 0x8(%rsp)
movq 0x10(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0xf1600
movq 0x18(%rsp), %rdx
addq $0x19, %rdx
leaq 0x4ef41e(%rip), %rdi    # 0x51e9df
leaq 0x4ecdc3(%rip), %rsi    # 0x51c38b
xorl %ecx, %ecx
callq 0xf5f20
movq %rax, 0x8(%rsp)
movq 0x10(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0xf1600
movq 0x18(%rsp), %rdi
addq $0x18, %rdi
callq 0xf5f90
movq %rax, 0x8(%rsp)
movq 0x10(%rsp), %rdi
movq 0x8(%rsp), %rsi
callq 0xf1600
movq 0x10(%rsp), %rdi
movl $0x1, %esi
callq 0xf2980
movq 0x10(%rsp), %rax
addq $0x28, %rsp
retq
nop