// File: /workspace/github_c_makefile_star2_O2/samtools[P]htslib/cram/cram_io.c
// Function: cram_store_container
int cram_store_container(cram_fd *fd, cram_container *c, char *dat, int *size)
{
    char *cp = (char *)dat;
    int i;

    // Check the input buffer is large enough according to our stated
    // requirements. (NOTE: it may actually take less.)
    if (cram_container_size(c) > *size)
        return -1;

    if (CRAM_MAJOR_VERS(fd->version) == 1) {
        cp += itf8_put(cp, c->length);
    } else {
        *(int32_t *)cp = le_int4(c->length);
        cp += 4;
    }
    if (c->multi_seq) {
        cp += fd->vv.varint_put32(cp, NULL, -2);
        cp += fd->vv.varint_put32(cp, NULL, 0);
        cp += fd->vv.varint_put32(cp, NULL, 0);
    } else {
        cp += fd->vv.varint_put32s(cp, NULL, c->ref_seq_id);
        if (CRAM_MAJOR_VERS(fd->version) >= 4) {
            cp += fd->vv.varint_put64(cp, NULL, c->ref_seq_start);
            cp += fd->vv.varint_put64(cp, NULL, c->ref_seq_span);
        } else {
            cp += fd->vv.varint_put32(cp, NULL, c->ref_seq_start);
            cp += fd->vv.varint_put32(cp, NULL, c->ref_seq_span);
        }
    }
    cp += fd->vv.varint_put32(cp, NULL, c->num_records);
    if (CRAM_MAJOR_VERS(fd->version) == 2) {
        cp += fd->vv.varint_put64(cp, NULL, c->record_counter);
    } else if (CRAM_MAJOR_VERS(fd->version) >= 3) {
        cp += fd->vv.varint_put32(cp, NULL, c->record_counter);
    }
    cp += fd->vv.varint_put64(cp, NULL, c->num_bases);
    cp += fd->vv.varint_put32(cp, NULL, c->num_blocks);
    cp += fd->vv.varint_put32(cp, NULL, c->num_landmarks);
    for (i = 0; i < c->num_landmarks; i++)
        cp += fd->vv.varint_put32(cp, NULL, c->landmark[i]);

    if (CRAM_MAJOR_VERS(fd->version) >= 3) {
        c->crc32 = crc32(0L, (uc *)dat, cp-dat);
        cp[0] =  c->crc32        & 0xff;
        cp[1] = (c->crc32 >>  8) & 0xff;
        cp[2] = (c->crc32 >> 16) & 0xff;
        cp[3] = (c->crc32 >> 24) & 0xff;
        cp += 4;
    }

    *size = cp-dat; // actual used size

    return 0;
}

// Assembly:
movl 0x30(%rsi), %eax
leal (%rax,%rax,4), %eax
addl $0x37, %eax
cmpl (%rcx), %eax
jle 0x42be1
pushq $-0x1
popq %rax
retq
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x18, %rsp
movq %rdx, %rbx
movq %rsi, %r15
movq %rdi, %r12
movl $0xffffff00, %eax       # imm = 0xFFFFFF00
andl 0xc(%rdi), %eax
movl (%rsi), %esi
cmpl $0x100, %eax            # imm = 0x100
movq %rcx, 0x8(%rsp)
jne 0x42c1b
movq %rbx, %rdi
callq 0x3e715
movl %eax, %r13d
jmp 0x42c21
movl %esi, (%rbx)
pushq $0x4
popq %r13
addq %rbx, %r13
cmpl $0x0, 0xac(%r15)
je 0x42c62
pushq $-0x2
popq %rdx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
movslq %eax, %rbp
addq %r13, %rbp
movq %rbp, %rdi
xorl %esi, %esi
xorl %edx, %edx
callq *0x89c8(%r12)
movslq %eax, %r13
addq %rbp, %r13
movq %r13, %rdi
xorl %esi, %esi
xorl %edx, %edx
jmp 0x42cc7
movl 0x4(%r15), %edx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89d0(%r12)
movslq %eax, %rbp
addq %r13, %rbp
cmpl $0x400, 0xc(%r12)       # imm = 0x400
movq 0x8(%r15), %rdx
movq %rbp, %rdi
jl 0x42cae
xorl %esi, %esi
callq *0x89d8(%r12)
movslq %eax, %r13
addq %rbp, %r13
movq 0x10(%r15), %rdx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89d8(%r12)
jmp 0x42ccf
xorl %esi, %esi
callq *0x89c8(%r12)
movslq %eax, %r13
addq %rbp, %r13
movl 0x10(%r15), %edx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
movslq %eax, %rbp
addq %r13, %rbp
movl 0x28(%r15), %edx
movq %rbp, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
movslq %eax, %r13
addq %rbp, %r13
movl 0xc(%r12), %eax
sarl $0x8, %eax
cmpl $0x2, %eax
movq %rbx, 0x10(%rsp)
jne 0x42d11
movq 0x18(%r15), %rdx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89d8(%r12)
jmp 0x42d24
jle 0x42d29
movl 0x18(%r15), %edx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
cltq
addq %rax, %r13
movq 0x20(%r15), %rdx
xorl %r14d, %r14d
movq %r13, %rdi
xorl %esi, %esi
callq *0x89d8(%r12)
movslq %eax, %rbp
addq %r13, %rbp
movl 0x2c(%r15), %edx
movq %rbp, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
movslq %eax, %rbx
addq %rbp, %rbx
movl 0x30(%r15), %edx
movq %rbx, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
movslq %eax, %r13
addq %rbx, %r13
movq 0x10(%rsp), %rbx
movslq 0x30(%r15), %rax
cmpq %rax, %r14
jge 0x42d9e
movq 0x38(%r15), %rax
movl (%rax,%r14,4), %edx
movq %r13, %rdi
xorl %esi, %esi
callq *0x89c8(%r12)
cltq
addq %rax, %r13
incq %r14
jmp 0x42d76
cmpl $0x2ff, 0xc(%r12)       # imm = 0x2FF
jle 0x42de8
movl %r13d, %edx
subl %ebx, %edx
xorl %edi, %edi
movq %rbx, %rsi
callq 0x4320
movl %eax, 0x280(%r15)
movb %al, (%r13)
movb 0x281(%r15), %al
movb %al, 0x1(%r13)
movb 0x282(%r15), %al
movb %al, 0x2(%r13)
movb 0x283(%r15), %al
movb %al, 0x3(%r13)
addq $0x4, %r13
movq 0x8(%rsp), %rax
subl %ebx, %r13d
movl %r13d, (%rax)
xorl %eax, %eax
addq $0x18, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq