// File: /workspace/github_cpp_makefile_star2_O3/ncbi[P]amr/common.cpp
// Function: Common_sp::ShellApplication::initVar()
void ShellApplication::initVar () 
{
  ASSERT (tmp. empty ());  
  if (useTmp)
    tmp = makeTempDir ();
  
  stderr. quiet = getQuiet ();

  startTime = time (NULL);
  stderr << "Running: " << colorize_raw (getCommandLine (), Color::yellow, false, ! isRedirected (cerr)) << '\n';  

  // threads_max
  if (threadsUsed)
  {
    const size_t threads_max_max = get_threads_max_max ();
    if (threads_max > threads_max_max)
    {
      stderr << "The number of threads cannot be greater than " << threads_max_max << " on this computer" << '\n'
             << "The current number of threads is " << threads_max << ", reducing to " << threads_max_max << '\n';
      threads_max = threads_max_max;
    }
  }
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x108, %rsp            # imm = 0x108
movq %rdi, %rbx
callq 0xa070
movl $0x0, (%rax)
cmpq $0x0, 0x170(%rbx)
jne 0x60d82
cmpb $0x1, 0x160(%rbx)
jne 0x60b77
leaq 0x168(%rbx), %r14
leaq 0x8(%rsp), %r15
movq %r15, %rdi
callq 0x3b4cd
movq %r14, %rdi
movq %r15, %rsi
callq 0xa6e0
movq (%r15), %rdi
leaq 0x18(%rsp), %rax
cmpq %rax, %rdi
je 0x60b77
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xa5a0
cmpq $0x1, 0x4fa39(%rip)     # 0xb05b8
jne 0x60b85
xorl %eax, %eax
jmp 0x60b94
callq 0xa500
cmpq 0x4ff37(%rip), %rax     # 0xb0ac8
setne %al
cmpl $0x0, 0x4ff71(%rip)     # 0xb0b0c
sets %cl
orb %al, %cl
leaq 0x1b8(%rbx), %r14
movb %cl, 0x1b8(%rbx)
xorl %edi, %edi
callq 0xa550
movq %rax, 0x1c0(%rbx)
leaq 0x2dee8(%rip), %rsi     # 0x8eaaa
movq %r14, %rdi
callq 0x2f588
movq %rax, %r15
leaq 0x28(%rsp), %r12
movq %r12, %rdi
callq 0x335b8
movq 0x4f3bf(%rip), %rax     # 0xaffa0
movq (%rax), %rdi
callq 0xa5f0
movl %eax, %edi
callq 0xa9f0
xorl %r8d, %r8d
testl %eax, %eax
setne %r8b
leaq 0x8(%rsp), %rdi
movq %r12, %rsi
movl $0x21, %edx
xorl %ecx, %ecx
callq 0x2ef5b
movb (%r15), %al
testb %al, %al
jne 0x60c2d
movq 0x8(%rsp), %rsi
movq 0x10(%rsp), %rdx
movq 0x4f3bb(%rip), %rdi     # 0xaffe0
callq 0xa640
movb (%r15), %al
testb $0x1, %al
jne 0x60c4a
leaq 0x48(%rsp), %rsi
movb $0xa, (%rsi)
movq 0x4f3a0(%rip), %rdi     # 0xaffe0
movl $0x1, %edx
callq 0xa640
leaq 0x18(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x60c65
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xa5a0
leaq 0x38(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x60c80
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xa5a0
cmpb $0x1, 0xaa(%rbx)
jne 0x60d70
callq 0x338e8
cmpq %rax, 0x4f91f(%rip)     # 0xb05b8
jbe 0x60d70
movq %rax, %rbx
leaq 0x2de0b(%rip), %rsi     # 0x8eab4
movq %r14, %rdi
callq 0x65b76
movq %rax, %r14
cmpb $0x0, (%rax)
jne 0x60cc8
movq 0x4f320(%rip), %rdi     # 0xaffe0
movq %rbx, %rsi
callq 0xa3e0
leaq 0x2de13(%rip), %rsi     # 0x8eae2
movq %r14, %rdi
callq 0x65baa
movq %rax, %r14
cmpb $0x0, (%rax)
jne 0x60cf8
leaq 0x8(%rsp), %rsi
movb $0xa, (%rsi)
movq 0x4f2f2(%rip), %rdi     # 0xaffe0
movl $0x1, %edx
callq 0xa640
leaq 0x2ddf5(%rip), %rsi     # 0x8eaf4
movq %r14, %rdi
callq 0x65bde
movq %rax, %r14
cmpb $0x0, (%rax)
jne 0x60d22
movq 0x4f8a2(%rip), %rsi     # 0xb05b8
movq 0x4f2c3(%rip), %rdi     # 0xaffe0
callq 0xa3e0
leaq 0x2dded(%rip), %rsi     # 0x8eb16
movq %r14, %rdi
callq 0x65c12
movq %rax, %r14
movb (%rax), %al
testb %al, %al
jne 0x60d4c
movq 0x4f29f(%rip), %rdi     # 0xaffe0
movq %rbx, %rsi
callq 0xa3e0
movb (%r14), %al
testb $0x1, %al
jne 0x60d69
leaq 0x8(%rsp), %rsi
movb $0xa, (%rsi)
movq 0x4f281(%rip), %rdi     # 0xaffe0
movl $0x1, %edx
callq 0xa640
movq %rbx, 0x4f848(%rip)     # 0xb05b8
addq $0x108, %rsp            # imm = 0x108
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
callq 0xa6b0
testl %eax, %eax
jne 0x60e1a
leaq 0xb8(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x2bb94(%rip), %rsi     # 0x8c936
leaq 0x2bba0(%rip), %rdx     # 0x8c949
leaq 0xa8(%rsp), %rdi
callq 0x2fa1a
leaq 0xc8(%rsp), %rdi
movl $0x10d7, %esi           # imm = 0x10D7
callq 0x2d1fa
leaq 0xe8(%rsp), %rdi
leaq 0xa8(%rsp), %rsi
leaq 0xc8(%rsp), %rdx
callq 0x2d152
leaq 0x29df9(%rip), %rsi     # 0x8abe5
leaq 0xe8(%rsp), %rdi
callq 0xaac0
leaq 0x58(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x60e24
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x60e31
movl $0x1, %edi
callq 0xa6c0
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x50(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x98(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x2dc19(%rip), %rsi     # 0x8ea76
leaq 0x2dc45(%rip), %rdx     # 0x8eaa9
leaq 0x88(%rsp), %rdi
callq 0x2fa1a
leaq 0x2babb(%rip), %rsi     # 0x8c933
leaq 0x88(%rsp), %rdi
callq 0xaac0
leaq 0x78(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x60ea7
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x60eb4
movq %rdx, 0x68(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x78(%rsp)
movq 0x8(%rax), %rsi
leaq 0x68(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x28(%rsp), %rdi
leaq 0x48(%rsp), %rsi
callq 0x2d152
leaq 0x2de02(%rip), %rsi     # 0x8ece8
leaq 0x28(%rsp), %rdi
callq 0xaac0
leaq 0x18(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x60f11
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x60f1e
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
leaq 0x8(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x34fa2
movq %rax, %rbx
movq 0x8(%rsp), %rdi
cmpq %rbp, %rdi
je 0x60f5e
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x60f5e
movq %rax, %rbx
leaq 0x38(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x60f7e
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x60f7e
movq %rax, %rbx
movq 0x68(%rsp), %rdi
cmpq %r13, %rdi
je 0x60f9a
movq 0x78(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x60f9a
movq %rax, %rbx
movq 0x88(%rsp), %rdi
cmpq %r12, %rdi
je 0x60fbc
movq 0x98(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x60fbc
movq %rax, %rbx
movq 0x48(%rsp), %rdi
cmpq %r15, %rdi
je 0x60fd8
movq 0x58(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x60fd8
movq %rax, %rbx
leaq 0xf8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x60ffe
movq 0xf8(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x60ffe
movq %rax, %rbx
leaq 0xd8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x61024
movq 0xd8(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x61024
movq %rax, %rbx
movq 0xa8(%rsp), %rdi
cmpq %r14, %rdi
je 0x61080
movq 0xb8(%rsp), %rsi
jmp 0x61078
movq %rax, %rbx
jmp 0x61080
jmp 0x61042
movq %rax, %rbx
leaq 0x18(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x61065
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xa5a0
jmp 0x61065
movq %rax, %rbx
leaq 0x38(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x61080
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xa5a0
movq %rbx, %rdi
callq 0xaa10