// File: /workspace/github_cpp_makefile_star2_O3/karel-brinda[P]ococo/ext/htslib/faidx.c
// Function: fai_build
int fai_build(const char *fn)
{
    char *str;
    BGZF *bgzf;
    FILE *fp;
    faidx_t *fai;
    str = (char*)calloc(strlen(fn) + 5, 1);
    sprintf(str, "%s.fai", fn);
    bgzf = bgzf_open(fn, "r");
    if ( !bgzf ) {
        fprintf(stderr, "[fai_build] fail to open the FASTA file %s\n",fn);
        free(str);
        return -1;
    }
    if ( bgzf->is_compressed ) bgzf_index_build_init(bgzf);
    fai = fai_build_core(bgzf);
    if ( !fai )
    {
        if ( bgzf->is_compressed && bgzf->is_gzip ) fprintf(stderr,"Cannot index files compressed with gzip, please use bgzip\n");
        bgzf_close(bgzf);
        free(str);
        return -1;
    }
    if ( bgzf->is_compressed ) {
        if (bgzf_index_dump(bgzf, fn, ".gzi") < 0) {
            fprintf(stderr, "[fai_build] fail to make bgzf index %s.gzi\n", fn);
            fai_destroy(fai); free(str);
            return -1;
        }
    }
    if (bgzf_close(bgzf) < 0) {
        fprintf(stderr, "[fai_build] Error on closing %s\n", fn);
        fai_destroy(fai); free(str);
        return -1;
    }
    fp = fopen(str, "wb");
    if ( !fp ) {
        fprintf(stderr, "[fai_build] fail to write FASTA index %s\n",str);
        fai_destroy(fai); free(str);
        return -1;
    }
    fai_save(fai, fp);
    fclose(fp);
    free(str);
    fai_destroy(fai);
    return 0;
}

// Assembly:
pushq %r15
pushq %r14
pushq %r12
pushq %rbx
pushq %rax
movq %rdi, %r14
callq 0x4230
leaq 0x5(%rax), %rdi
movl $0x1, %esi
callq 0x4360
movq %rax, %rbx
leaq 0xd3ee(%rip), %rsi      # 0x53088
movq %rax, %rdi
movq %r14, %rdx
xorl %eax, %eax
callq 0x4110
leaq 0xbc93(%rip), %rsi      # 0x51941
movq %r14, %rdi
callq 0x42768
testq %rax, %rax
je 0x45d8d
movq %rax, %r12
testb $0x60, 0x3(%rax)
je 0x45cd0
movq %r12, %rdi
callq 0x4499b
movq %r12, %rdi
callq 0x453b0
movq %rax, %r15
movl (%r12), %eax
testq %r15, %r15
je 0x45d57
testl $0x60000000, %eax       # imm = 0x60000000
je 0x45d05
leaq 0xd39d(%rip), %rdx      # 0x5308f
movq %r12, %rdi
movq %r14, %rsi
callq 0x449ce
testl %eax, %eax
js 0x45dca
movq %r12, %rdi
callq 0x441e8
testl %eax, %eax
js 0x45daa
leaq 0xe1bc(%rip), %rsi      # 0x53ed8
movq %rbx, %rdi
callq 0x4600
testq %rax, %rax
je 0x45dbd
movq %rax, %r14
movq %r15, %rdi
movq %rax, %rsi
callq 0x45aff
movq %r14, %rdi
callq 0x4530
movq %rbx, %rdi
callq 0x4610
movq %r15, %rdi
callq 0x45a85
xorl %eax, %eax
jmp 0x45d81
testl $0x60000000, %eax       # imm = 0x60000000
sete %cl
testl %eax, %eax
setns %al
orb %cl, %al
je 0x45def
movq %r12, %rdi
callq 0x441e8
movq %rbx, %rdi
callq 0x4610
movl $0xffffffff, %eax       # imm = 0xFFFFFFFF
addq $0x8, %rsp
popq %rbx
popq %r12
popq %r14
popq %r15
retq
movq 0x1c234(%rip), %rax     # 0x61fc8
movq (%rax), %rdi
leaq 0xe509(%rip), %rsi      # 0x542a7
movq %r14, %rdx
xorl %eax, %eax
callq 0x4770
jmp 0x45d74
movq 0x1c217(%rip), %rax     # 0x61fc8
movq (%rax), %rdi
leaq 0xe57f(%rip), %rsi      # 0x5433a
jmp 0x45ddb
movq %rbx, %rdi
movq %r15, %rsi
callq 0x5ed3
jmp 0x45d7c
movq 0x1c1f7(%rip), %rax     # 0x61fc8
movq (%rax), %rdi
leaq 0xe533(%rip), %rsi      # 0x5430e
movq %r14, %rdx
xorl %eax, %eax
callq 0x4770
movq %r15, %rdi
callq 0x45a85
jmp 0x45d74
callq 0x5f0f
jmp 0x45d6c