// File: /workspace/github_cpp_makefile_star2_O1/ncbi[P]amr/amr_report.cpp
// Function: (anonymous namespace)::BlastAlignment::insideEq((anonymous namespace)::BlastAlignment const&) const
bool insideEq (const BlastAlignment &other) const
    { ASSERT (targetProt == other. targetProt);
      ASSERT (targetName == other. targetName);
    #if 1
    	if (targetStrand != other. targetStrand)
    	  return false;
    	if (   targetStart + mismatchTailTarget () >= other. targetStart 
          && targetEnd                           <= other. targetEnd + mismatchTailTarget ()
         )
        return true;
      if (   ! partialPseudo ()
          || isMutationProt ()
          || other. isMutationProt ()
          || fusion2geneSymbols () != other. fusion2geneSymbols ()
        #if 0
          || refAccession. empty ()
          || other. refAccession. empty ()
          || refAccession != other. refAccession
        #endif
         )
        return false;
      // PD-4698
      // Most probably a repeat protein
      const size_t pseudoOverlap = mismatchTailTarget () * 2;  // PAR
      return    (targetStart < other. targetStart && targetEnd                   >= other. targetStart + pseudoOverlap)
             || (targetEnd   > other. targetEnd   && targetStart + pseudoOverlap <= other. targetEnd);
    #else
    	return    targetStrand                        == other. targetStrand
             && targetStart + mismatchTailTarget () >= other. targetStart 
             && targetEnd                           <= other. targetEnd + mismatchTailTarget ();
    #endif
    }

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x108, %rsp            # imm = 0x108
movq %rsi, %r14
movq %rdi, %rbx
callq 0xb070
movl $0x0, (%rax)
movb 0x8(%rbx), %bpl
cmpb 0x8(%r14), %bpl
jne 0x316c7
movl $0x0, (%rax)
movq 0x18(%rbx), %rdx
cmpq 0x18(%r14), %rdx
jne 0x31628
testq %rdx, %rdx
je 0x314be
movq 0x10(%r14), %rsi
movq 0x10(%rbx), %rdi
callq 0xb570
testl %eax, %eax
jne 0x31628
movb 0x68(%rbx), %al
cmpb 0x68(%r14), %al
jne 0x31605
testb %bpl, %bpl
movl $0xa, %eax
movl $0x1e, %ecx
cmovneq %rax, %rcx
movq 0x50(%rbx), %rax
addq %rcx, %rax
cmpq 0x50(%r14), %rax
jb 0x314f9
addq 0x58(%r14), %rcx
movb $0x1, %al
cmpq %rcx, 0x58(%rbx)
jbe 0x31607
movq %rbx, %rdi
callq 0x30b7e
movb $0x1, %bpl
testb %al, %al
je 0x31583
leaq 0x2e8(%rbx), %rdi
leaq 0x71ef8(%rip), %rsi     # 0xa340e
callq 0xb150
testl %eax, %eax
je 0x31583
leaq 0x2e8(%r14), %rdi
leaq 0x71ee1(%rip), %rsi     # 0xa340e
callq 0xb150
testl %eax, %eax
je 0x31583
leaq 0x8(%rsp), %rdi
movq %rbx, %rsi
callq 0x31ae6
leaq 0x48(%rsp), %rdi
movq %r14, %rsi
callq 0x31ae6
movq 0x10(%rsp), %rdx
movb $0x1, %r15b
cmpq 0x50(%rsp), %rdx
jne 0x31619
testq %rdx, %rdx
je 0x31621
movq 0x48(%rsp), %rsi
movq 0x8(%rsp), %rdi
callq 0xb570
testl %eax, %eax
setne %bpl
jmp 0x31586
xorl %r15d, %r15d
testb %r15b, %r15b
je 0x315c1
leaq 0x58(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x315a6
movq 0x58(%rsp), %rsi
incq %rsi
callq 0xb550
leaq 0x18(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x315c1
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xb550
testb %bpl, %bpl
jne 0x31605
cmpb $0x0, 0x8(%rbx)
movl $0x14, %eax
movl $0x3c, %ecx
cmovneq %rax, %rcx
movq 0x50(%rbx), %rdx
movq 0x50(%r14), %rsi
cmpq %rsi, %rdx
jae 0x315f0
addq %rcx, %rsi
movb $0x1, %al
cmpq %rsi, 0x58(%rbx)
jae 0x31607
movq 0x58(%r14), %rax
cmpq %rax, 0x58(%rbx)
jbe 0x31605
addq %rdx, %rcx
cmpq %rax, %rcx
setbe %al
jmp 0x31607
xorl %eax, %eax
addq $0x108, %rsp            # imm = 0x108
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movb $0x1, %bpl
jmp 0x31586
xorl %ebp, %ebp
jmp 0x31586
callq 0xb660
testl %eax, %eax
jne 0x31766
leaq 0xb8(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x722df(%rip), %rsi     # 0xa3927
leaq 0x722ef(%rip), %rdx     # 0xa393e
leaq 0xa8(%rsp), %rdi
callq 0x39720
leaq 0xc8(%rsp), %rdi
movl $0x405, %esi            # imm = 0x405
callq 0x39da6
leaq 0xe8(%rsp), %rdi
leaq 0xa8(%rsp), %rsi
leaq 0xc8(%rsp), %rdx
callq 0x39cfe
leaq 0x722ad(%rip), %rsi     # 0xa393f
leaq 0xe8(%rsp), %rdi
callq 0xba70
leaq 0x38(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x31770
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x3177d
callq 0xb660
testl %eax, %eax
jne 0x31766
leaq 0xb8(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x72240(%rip), %rsi     # 0xa3927
leaq 0x72250(%rip), %rdx     # 0xa393e
leaq 0xa8(%rsp), %rdi
callq 0x39720
leaq 0xc8(%rsp), %rdi
movl $0x404, %esi            # imm = 0x404
callq 0x39da6
leaq 0xe8(%rsp), %rdi
leaq 0xa8(%rsp), %rsi
leaq 0xc8(%rsp), %rdx
callq 0x39cfe
leaq 0x7220e(%rip), %rsi     # 0xa393f
leaq 0xe8(%rsp), %rdi
callq 0xba70
leaq 0x38(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x317fa
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x31807
movl $0x1, %edi
callq 0xb670
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x30(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x98(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x7351e(%rip), %rsi     # 0xa4cc7
leaq 0x73569(%rip), %rdx     # 0xa4d19
leaq 0x88(%rsp), %rdi
callq 0x39720
leaq 0x7264c(%rip), %rsi     # 0xa3e10
leaq 0x88(%rsp), %rdi
callq 0xba70
leaq 0x78(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x3187d
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x3188a
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x30(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x98(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x73494(%rip), %rsi     # 0xa4cc7
leaq 0x734df(%rip), %rdx     # 0xa4d19
leaq 0x88(%rsp), %rdi
callq 0x39720
leaq 0x725c2(%rip), %rsi     # 0xa3e10
leaq 0x88(%rsp), %rdi
callq 0xba70
leaq 0x78(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x318e7
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x318f4
movq %rdx, 0x68(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x78(%rsp)
movq 0x8(%rax), %rsi
leaq 0x68(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x48(%rsp), %rdi
leaq 0x28(%rsp), %rsi
callq 0x39cfe
leaq 0x7347e(%rip), %rsi     # 0xa4d3a
leaq 0x48(%rsp), %rdi
callq 0xba70
leaq 0x18(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x31951
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x3195e
movq %rdx, 0x68(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x78(%rsp)
movq 0x8(%rax), %rsi
leaq 0x68(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x48(%rsp), %rdi
leaq 0x28(%rsp), %rsi
callq 0x39cfe
leaq 0x733f4(%rip), %rsi     # 0xa4d1a
leaq 0x48(%rsp), %rdi
callq 0xba70
leaq 0x18(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x3197f
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x3198c
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
leaq 0x8(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x43ebb
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
leaq 0x8(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x43ebb
jmp 0x319b1
jmp 0x319cd
movq %rax, %rbx
movq 0x8(%rsp), %rdi
cmpq %rbp, %rdi
je 0x319d0
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x319d0
movq %rax, %rbx
leaq 0x58(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x319f2
movq 0x58(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x319f2
jmp 0x319ef
movq %rax, %rbx
movq 0x68(%rsp), %rdi
cmpq %r13, %rdi
je 0x31a10
movq 0x78(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x31a10
jmp 0x31a0d
movq %rax, %rbx
movq 0x88(%rsp), %rdi
cmpq %r12, %rdi
je 0x31a34
movq 0x98(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x31a34
jmp 0x31a31
movq %rax, %rbx
movq 0x28(%rsp), %rdi
cmpq %r15, %rdi
je 0x31a52
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x31a52
jmp 0x31a4f
movq %rax, %rbx
leaq 0xf8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x31a92
movq 0xf8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x31a92
jmp 0x31a8f
movq %rax, %rbx
leaq 0x18(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x31ade
movq 0x18(%rsp), %rsi
jmp 0x31acf
movq %rax, %rbx
leaq 0xd8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x31aba
movq 0xd8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x31aba
jmp 0x31ab7
movq %rax, %rbx
movq 0xa8(%rsp), %rdi
cmpq %r14, %rdi
je 0x31ade
movq 0xb8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x31ade
jmp 0x31adb
movq %rax, %rbx
movq %rbx, %rdi
callq 0xb9c0