// File: /workspace/github_cpp_makefile_star2_O1/ncbi[P]amr/amr_report.cpp
// Function: (anonymous namespace)::BlastAlignment::setCdss(GFF_sp::Annot const&)
void setCdss (const Annot &annot)
    { ASSERT (targetProt);
    	ASSERT (cdss. empty ());
    	const Set<Locus> &cdss_ = annot. findLoci (targetName);
    	ASSERT (! cdss_. empty ());
  	  insertAll (cdss, cdss_);
  	#if 0
  	  // PD-2269
  	  for (const Locus& cds : *cdss_)
  	    // PD-2138
  	    if (   ! cds. partial
  	        && cds. size () != 3 * targetLen + 3
  	        && cds. size () != 3 * targetLen     // PD-2159
  	       )
  	      throw runtime_error ("Mismatch in protein length between the protein " + targetName 
  	                           + " and the length of the protein on line " + toString (cds. lineNum) 
  	                           + " of the GFF file. Please check that the GFF and protein files match.");
  	#endif
  	  qc ();
    }

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x108, %rsp            # imm = 0x108
movq %rsi, %r15
movq %rdi, %rbx
callq 0xb070
movl $0x0, (%rax)
cmpb $0x0, 0x8(%rbx)
je 0x256bc
movq %rax, %r14
movl $0x0, (%rax)
movq 0x3b8(%rbx), %rax
cmpq 0x3c0(%rbx), %rax
jne 0x2575b
leaq 0x10(%rbx), %rsi
movq %r15, %rdi
callq 0x8c666
movl $0x0, (%r14)
cmpq $0x0, 0x28(%rax)
je 0x257fa
leaq 0x3b8(%rbx), %rdi
movq 0x3b8(%rbx), %rsi
movq 0x18(%rax), %rdx
addq $0x8, %rax
movq %rax, %rcx
callq 0x3ed32
movq %rbx, %rdi
addq $0x108, %rsp            # imm = 0x108
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
jmp 0x1ea6a
callq 0xb660
testl %eax, %eax
jne 0x25899
leaq 0x98(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x7e24b(%rip), %rsi     # 0xa3927
leaq 0x7e25b(%rip), %rdx     # 0xa393e
leaq 0x88(%rsp), %rdi
callq 0x39720
leaq 0xa8(%rsp), %rdi
movl $0x503, %esi            # imm = 0x503
callq 0x39da6
leaq 0xc8(%rsp), %rdi
leaq 0x88(%rsp), %rsi
leaq 0xa8(%rsp), %rdx
callq 0x39cfe
leaq 0x7e219(%rip), %rsi     # 0xa393f
leaq 0xc8(%rsp), %rdi
callq 0xba70
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x258a3
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x258b0
callq 0xb660
testl %eax, %eax
jne 0x25899
leaq 0x98(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x7e1ac(%rip), %rsi     # 0xa3927
leaq 0x7e1bc(%rip), %rdx     # 0xa393e
leaq 0x88(%rsp), %rdi
callq 0x39720
leaq 0xa8(%rsp), %rdi
movl $0x504, %esi            # imm = 0x504
callq 0x39da6
leaq 0xc8(%rsp), %rdi
leaq 0x88(%rsp), %rsi
leaq 0xa8(%rsp), %rdx
callq 0x39cfe
leaq 0x7e17a(%rip), %rsi     # 0xa393f
leaq 0xc8(%rsp), %rdi
callq 0xba70
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25924
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x25931
callq 0xb660
testl %eax, %eax
jne 0x25899
leaq 0x98(%rsp), %r14
movq %r14, -0x10(%r14)
leaq 0x7e10d(%rip), %rsi     # 0xa3927
leaq 0x7e11d(%rip), %rdx     # 0xa393e
leaq 0x88(%rsp), %rdi
callq 0x39720
leaq 0xa8(%rsp), %rdi
movl $0x506, %esi            # imm = 0x506
callq 0x39da6
leaq 0xc8(%rsp), %rdi
leaq 0x88(%rsp), %rsi
leaq 0xa8(%rsp), %rdx
callq 0x39cfe
leaq 0x7e0db(%rip), %rsi     # 0xa393f
leaq 0xc8(%rsp), %rdi
callq 0xba70
leaq 0x18(%rsp), %r15
movq %r15, -0x10(%r15)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x259a5
movups (%rcx), %xmm0
movups %xmm0, (%r15)
jmp 0x259b2
movl $0x1, %edi
callq 0xb670
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x10(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x78(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x7ef5a(%rip), %rsi     # 0xa4833
leaq 0x7ef95(%rip), %rdx     # 0xa4875
leaq 0x68(%rsp), %rdi
callq 0x39720
leaq 0x7e51f(%rip), %rsi     # 0xa3e10
leaq 0x68(%rsp), %rdi
callq 0xba70
leaq 0x38(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25a26
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x25a33
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x10(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x78(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x7eed9(%rip), %rsi     # 0xa4833
leaq 0x7ef14(%rip), %rdx     # 0xa4875
leaq 0x68(%rsp), %rdi
callq 0x39720
leaq 0x7e49e(%rip), %rsi     # 0xa3e10
leaq 0x68(%rsp), %rdi
callq 0xba70
leaq 0x38(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25a9d
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x25aaa
movq %rdx, 0x8(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x18(%rsp)
movq 0x8(%rax), %rdx
movq %rdx, 0x10(%rsp)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0x78(%rsp), %r12
movq %r12, -0x10(%r12)
leaq 0x7ee58(%rip), %rsi     # 0xa4833
leaq 0x7ee93(%rip), %rdx     # 0xa4875
leaq 0x68(%rsp), %rdi
callq 0x39720
leaq 0x7e41d(%rip), %rsi     # 0xa3e10
leaq 0x68(%rsp), %rdi
callq 0xba70
leaq 0x38(%rsp), %r13
movq %r13, -0x10(%r13)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25b14
movups (%rcx), %xmm0
movups %xmm0, (%r13)
jmp 0x25b21
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rsi
leaq 0x28(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0xe8(%rsp), %rdi
leaq 0x8(%rsp), %rsi
callq 0x39cfe
leaq 0x84be4(%rip), %rsi     # 0xaa64c
leaq 0xe8(%rsp), %rdi
callq 0xba70
leaq 0x58(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25b84
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x25b91
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rsi
leaq 0x28(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0xe8(%rsp), %rdi
leaq 0x8(%rsp), %rsi
callq 0x39cfe
leaq 0x7f346(%rip), %rsi     # 0xa4e25
leaq 0xe8(%rsp), %rdi
callq 0xba70
leaq 0x58(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25bb2
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x25bbf
movq %rdx, 0x28(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x38(%rsp)
movq 0x8(%rax), %rsi
leaq 0x28(%rsp), %rdx
movq %rsi, 0x8(%rdx)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
leaq 0xe8(%rsp), %rdi
leaq 0x8(%rsp), %rsi
callq 0x39cfe
leaq 0x7ed20(%rip), %rsi     # 0xa4876
leaq 0xe8(%rsp), %rdi
callq 0xba70
leaq 0x58(%rsp), %rbp
movq %rbp, -0x10(%rbp)
movq (%rax), %rdx
movq %rax, %rcx
addq $0x10, %rcx
cmpq %rcx, %rdx
jne 0x25be0
movups (%rcx), %xmm0
movups %xmm0, (%rbp)
jmp 0x25bed
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
leaq 0x48(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x43ebb
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
leaq 0x48(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x43ebb
movq %rdx, 0x48(%rsp)
movq (%rcx), %rdx
movq %rdx, 0x58(%rsp)
movq 0x8(%rax), %rdx
leaq 0x48(%rsp), %rdi
movq %rdx, 0x8(%rdi)
movq %rcx, (%rax)
movq $0x0, 0x8(%rax)
movb $0x0, 0x10(%rax)
callq 0x43ebb
jmp 0x25c16
jmp 0x25c32
jmp 0x25c16
jmp 0x25c32
movq %rax, %rbx
movq 0x48(%rsp), %rdi
cmpq %rbp, %rdi
je 0x25c35
movq 0x58(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25c35
movq %rax, %rbx
leaq 0xf8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x25c5f
movq 0xf8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25c5f
jmp 0x25c5c
jmp 0x25c5c
movq %rax, %rbx
movq 0x28(%rsp), %rdi
cmpq %r13, %rdi
je 0x25c7f
movq 0x38(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25c7f
jmp 0x25c7c
jmp 0x25c7c
movq %rax, %rbx
movq 0x68(%rsp), %rdi
cmpq %r12, %rdi
je 0x25c9f
movq 0x78(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25c9f
jmp 0x25c9c
jmp 0x25c9c
movq %rax, %rbx
movq 0x8(%rsp), %rdi
cmpq %r15, %rdi
je 0x25cbf
movq 0x18(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25cbf
jmp 0x25cbc
jmp 0x25cbc
movq %rax, %rbx
leaq 0xd8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x25ce9
movq 0xd8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25ce9
jmp 0x25ce6
jmp 0x25ce6
movq %rax, %rbx
leaq 0xb8(%rsp), %rax
movq -0x10(%rax), %rdi
cmpq %rax, %rdi
je 0x25d13
movq 0xb8(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25d13
jmp 0x25d10
jmp 0x25d10
movq %rax, %rbx
movq 0x88(%rsp), %rdi
cmpq %r14, %rdi
je 0x25d39
movq 0x98(%rsp), %rsi
incq %rsi
callq 0xb550
jmp 0x25d39
jmp 0x25d36
jmp 0x25d36
movq %rax, %rbx
movq %rbx, %rdi
callq 0xb9c0
nop