// File: /workspace/github_cpp_makefile_star2_O3/millanek[P]evo/./process_vcf_cbs.h
// Function: cbsSets::cbsSets(std::basic_ifstream<char, std::char_traits<char>>*&)
cbsSets(std::ifstream*& setsFile) {
        string line;
        string set1String; string set2String; string set3String;
        getline(*setsFile, set1String);
        getline(*setsFile, set2String);
        std::vector<string> set1 = split(set1String, ',');
        std::vector<string> set2 = split(set2String, ',');
        for (int i = 0; i < set1.size(); i++) {
            set1Loci.insert(atoi(set1[i].c_str()));
        }
        for (int i = 0; i < set2.size(); i++) {
            set2Loci.insert(atoi(set2[i].c_str()));
        }
        std::cerr << "set 1: "; print_vector(set1, std::cerr);
        std::cerr << "set 2: "; print_vector(set2, std::cerr);
        initialised = true;
    }

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0xf8, %rsp
movq %rsi, %r15
movq %rdi, %rbx
leaq 0x30(%rdi), %rax
movq %rax, (%rdi)
movl $0x1, %eax
movq %rax, 0x8(%rdi)
xorps %xmm0, %xmm0
movups %xmm0, 0x10(%rdi)
movl $0x3f800000, %ecx       # imm = 0x3F800000
movl %ecx, 0x20(%rdi)
movups %xmm0, 0x28(%rdi)
leaq 0x38(%rdi), %r14
leaq 0x68(%rdi), %rdx
movq %rdx, 0x38(%rdi)
movq %rax, 0x40(%rdi)
movups %xmm0, 0x48(%rdi)
movl %ecx, 0x58(%rdi)
movups %xmm0, 0x60(%rdi)
leaq 0xb8(%rsp), %rcx
movq %rcx, -0x10(%rcx)
xorl %eax, %eax
movq %rax, -0x8(%rcx)
movb %al, (%rcx)
leaq 0x78(%rsp), %rcx
movq %rcx, -0x10(%rcx)
movq %rax, -0x8(%rcx)
movb %al, (%rcx)
leaq 0x58(%rsp), %rcx
movq %rcx, -0x10(%rcx)
movq %rax, -0x8(%rcx)
movb %al, (%rcx)
leaq 0x98(%rsp), %rcx
movq %rcx, -0x10(%rcx)
movq %rax, -0x8(%rcx)
movb %al, (%rcx)
movq (%rsi), %r12
movq (%r12), %rax
movq -0x18(%rax), %rdi
addq %r12, %rdi
movl $0xa, %esi
callq 0x8450
movsbl %al, %edx
leaq 0x68(%rsp), %rsi
movq %r12, %rdi
callq 0x8870
movq (%r15), %r15
movq (%r15), %rax
movq -0x18(%rax), %rdi
addq %r15, %rdi
movl $0xa, %esi
callq 0x8450
movsbl %al, %edx
leaq 0x48(%rsp), %rsi
movq %r15, %rdi
callq 0x8870
leaq 0x30(%rsp), %rdi
leaq 0x68(%rsp), %rsi
movl $0x2c, %edx
callq 0x4d650
leaq 0x18(%rsp), %rdi
leaq 0x48(%rsp), %rsi
movl $0x2c, %edx
callq 0x4d650
movq 0x30(%rsp), %rax
cmpq %rax, 0x38(%rsp)
je 0x46a1d
xorl %r13d, %r13d
leaq 0x8(%rsp), %r15
leaq 0x10(%rsp), %r12
xorl %ebp, %ebp
movq (%rax,%r13), %rdi
callq 0x86e0
cltq
movq %rax, 0x8(%rsp)
movq %rbx, 0x10(%rsp)
movq %rbx, %rdi
movq %r15, %rsi
movq %r12, %rdx
callq 0x4304e
incq %rbp
movq 0x30(%rsp), %rax
movq 0x38(%rsp), %rcx
subq %rax, %rcx
sarq $0x5, %rcx
addq $0x20, %r13
cmpq %rbp, %rcx
ja 0x469dd
movq 0x18(%rsp), %rax
cmpq %rax, 0x20(%rsp)
je 0x46a78
xorl %r13d, %r13d
leaq 0x8(%rsp), %r15
leaq 0x10(%rsp), %r12
xorl %ebp, %ebp
movq (%rax,%r13), %rdi
callq 0x86e0
cltq
movq %rax, 0x8(%rsp)
movq %r14, 0x10(%rsp)
movq %r14, %rdi
movq %r15, %rsi
movq %r12, %rdx
callq 0x4304e
incq %rbp
movq 0x18(%rsp), %rax
movq 0x20(%rsp), %rcx
subq %rax, %rcx
sarq $0x5, %rcx
addq $0x20, %r13
cmpq %rbp, %rcx
ja 0x46a38
movq 0xbb569(%rip), %rdi     # 0x101fe8
leaq 0x8788e(%rip), %rsi     # 0xce314
movl $0x7, %edx
callq 0x84e0
leaq 0xe0(%rsp), %rdi
leaq 0x30(%rsp), %rsi
callq 0x2fc8e
movq 0xbb53f(%rip), %rsi     # 0x101fe8
leaq 0xe0(%rsp), %rdi
movl $0x9, %edx
movl $0x1, %ecx
callq 0x36ba0
leaq 0xe0(%rsp), %rdi
callq 0x2e784
movq 0xbb514(%rip), %rdi     # 0x101fe8
leaq 0x87841(%rip), %rsi     # 0xce31c
movl $0x7, %edx
callq 0x84e0
leaq 0xc8(%rsp), %rdi
leaq 0x18(%rsp), %rsi
callq 0x2fc8e
movq 0xbb4ea(%rip), %rsi     # 0x101fe8
leaq 0xc8(%rsp), %rdi
movl $0x9, %edx
movl $0x1, %ecx
callq 0x36ba0
leaq 0xc8(%rsp), %rdi
callq 0x2e784
movb $0x1, 0x90(%rbx)
leaq 0x18(%rsp), %rdi
callq 0x2e784
leaq 0x30(%rsp), %rdi
callq 0x2e784
movq 0x88(%rsp), %rdi
leaq 0x98(%rsp), %rax
cmpq %rax, %rdi
je 0x46b62
movq 0x98(%rsp), %rsi
incq %rsi
callq 0x8480
movq 0x48(%rsp), %rdi
leaq 0x58(%rsp), %rax
cmpq %rax, %rdi
je 0x46b7e
movq 0x58(%rsp), %rsi
incq %rsi
callq 0x8480
movq 0x68(%rsp), %rdi
leaq 0x78(%rsp), %rax
cmpq %rax, %rdi
je 0x46b9a
movq 0x78(%rsp), %rsi
incq %rsi
callq 0x8480
movq 0xa8(%rsp), %rdi
leaq 0xb8(%rsp), %rax
cmpq %rax, %rdi
je 0x46bbf
movq 0xb8(%rsp), %rsi
incq %rsi
callq 0x8480
addq $0xf8, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq %rax, %r15
leaq 0xc8(%rsp), %rdi
jmp 0x46be9
movq %rax, %r15
leaq 0xe0(%rsp), %rdi
callq 0x2e784
jmp 0x46c03
movq %rax, %r15
jmp 0x46c0d
jmp 0x46bf9
jmp 0x46c00
movq %rax, %r15
jmp 0x46c17
jmp 0x46c00
movq %rax, %r15
leaq 0x18(%rsp), %rdi
callq 0x2e784
leaq 0x30(%rsp), %rdi
callq 0x2e784
movq 0x88(%rsp), %rdi
leaq 0x98(%rsp), %rax
cmpq %rax, %rdi
je 0x46c3c
movq 0x98(%rsp), %rsi
incq %rsi
callq 0x8480
movq 0x48(%rsp), %rdi
leaq 0x58(%rsp), %rax
cmpq %rax, %rdi
je 0x46c58
movq 0x58(%rsp), %rsi
incq %rsi
callq 0x8480
movq 0x68(%rsp), %rdi
leaq 0x78(%rsp), %rax
cmpq %rax, %rdi
je 0x46c74
movq 0x78(%rsp), %rsi
incq %rsi
callq 0x8480
movq 0xa8(%rsp), %rdi
leaq 0xb8(%rsp), %rax
cmpq %rax, %rdi
je 0x46c99
movq 0xb8(%rsp), %rsi
incq %rsi
callq 0x8480
movq %r14, %rdi
callq 0x432dc
movq %rbx, %rdi
callq 0x432dc
movq %r15, %rdi
callq 0x8840