// File: /workspace/github_c_makefile_star2_O0/genometools[P]genometools/src/ltr/ltr_refseq_match_stream.c
// Function: gt_ltr_refseq_match_stream_new_with_mapping
GtNodeStream* gt_ltr_refseq_match_stream_new_with_mapping(
                                             GtNodeStream *in_stream,
                                             const char *refseq_file,
                                             GtRegionMapping *rmap,
                                             double evalue,
                                             bool dust,
                                             int word_size,
                                             int gapopen,
                                             int gapextend,
                                             int penalty,
                                             int reward,
                                             int num_threads,
                                             double xdrop,
                                             double identity,
                                             const char *moreblast,
                                             bool flcands,
                                             double min_ali_len_perc,
                                             GtUword params_id,
                                             const char *source,
                                             GT_UNUSED GtError *err)
{
  GtNodeStream *gs;
  GtLTRRefseqMatchStream *rms;
  gs = gt_node_stream_create(gt_ltr_refseq_match_stream_class(), false);
  rms = gt_ltr_refseq_match_stream_cast(gs);
  rms->in_stream = gt_node_stream_ref(in_stream);
  rms->nodes = gt_array_new(sizeof(GtGenomeNode*));
  rms->first_next = true;
  rms->params_id = params_id;
  rms->next_index = 0;
  rms->header_to_fn = gt_hashmap_new(GT_HASH_STRING,
                                     gt_ltr_refseq_match_stream_free_hash_elem,
                                     NULL);
  rms->refseq_file = refseq_file;
  rms->seq_file = "/tmp/run.tmp";   /* XXXX */
  rms->rmap = rmap;
  rms->evalue = evalue;
  rms->dust = dust;
  rms->word_size = word_size;
  rms->gapopen = gapopen;
  rms->gapextend = gapextend;
  rms->penalty = penalty;
  rms->reward = reward;
  rms->num_threads = num_threads;
  rms->xdrop = xdrop;
  rms->identity = identity;
  rms->moreblast = moreblast;
  rms->flcands = flcands;
  rms->source = source;
  rms->min_ali_len_perc = min_ali_len_perc;

  return gs;
}

// Assembly:
subq $0x68, %rsp
movq 0xb0(%rsp), %rax
movq 0xa8(%rsp), %rax
movq 0xa0(%rsp), %rax
movb 0x98(%rsp), %al
movq 0x90(%rsp), %r10
movl 0x88(%rsp), %r10d
movl 0x80(%rsp), %r10d
movl 0x78(%rsp), %r10d
movl 0x70(%rsp), %r10d
movq %rdi, 0x60(%rsp)
movq %rsi, 0x58(%rsp)
movq %rdx, 0x50(%rsp)
movsd %xmm0, 0x48(%rsp)
andb $0x1, %cl
movb %cl, 0x47(%rsp)
movl %r8d, 0x40(%rsp)
movl %r9d, 0x3c(%rsp)
movsd %xmm1, 0x30(%rsp)
movsd %xmm2, 0x28(%rsp)
andb $0x1, %al
movb %al, 0x27(%rsp)
movsd %xmm3, 0x18(%rsp)
callq 0x300d90
movq %rax, %rdi
xorl %esi, %esi
callq 0x1b1b80
movq %rax, 0x10(%rsp)
callq 0x300d90
movq %rax, %rdi
movq 0x10(%rsp), %rsi
callq 0x1b20f0
movq %rax, 0x8(%rsp)
movq 0x60(%rsp), %rdi
callq 0x1b1c50
movq %rax, %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x10(%rax)
movl $0x8, %edi
callq 0x80990
movq %rax, %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x18(%rax)
movq 0x8(%rsp), %rax
movb $0x1, 0x60(%rax)
movq 0xa0(%rsp), %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x50(%rax)
movq 0x8(%rsp), %rax
movq $0x0, 0x58(%rax)
movl $0x1, %edi
leaq -0x12d(%rip), %rsi      # 0x301330
xorl %eax, %eax
movl %eax, %edx
callq 0xe0c40
movq %rax, %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x20(%rax)
movq 0x58(%rsp), %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x30(%rax)
movq 0x8(%rsp), %rax
leaq 0x2914a2(%rip), %rcx    # 0x59292e
movq %rcx, 0x38(%rax)
movq 0x50(%rsp), %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x48(%rax)
movsd 0x48(%rsp), %xmm0
movq 0x8(%rsp), %rax
movsd %xmm0, 0x80(%rax)
movb 0x47(%rsp), %cl
movq 0x8(%rsp), %rax
andb $0x1, %cl
movb %cl, 0x61(%rax)
movl 0x40(%rsp), %ecx
movq 0x8(%rsp), %rax
movl %ecx, 0x64(%rax)
movl 0x3c(%rsp), %ecx
movq 0x8(%rsp), %rax
movl %ecx, 0x68(%rax)
movl 0x70(%rsp), %ecx
movq 0x8(%rsp), %rax
movl %ecx, 0x6c(%rax)
movl 0x78(%rsp), %ecx
movq 0x8(%rsp), %rax
movl %ecx, 0x70(%rax)
movl 0x80(%rsp), %ecx
movq 0x8(%rsp), %rax
movl %ecx, 0x74(%rax)
movl 0x88(%rsp), %ecx
movq 0x8(%rsp), %rax
movl %ecx, 0x78(%rax)
movsd 0x30(%rsp), %xmm0
movq 0x8(%rsp), %rax
movsd %xmm0, 0x88(%rax)
movsd 0x28(%rsp), %xmm0
movq 0x8(%rsp), %rax
movsd %xmm0, 0x90(%rax)
movq 0x90(%rsp), %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0xa0(%rax)
movb 0x27(%rsp), %cl
movq 0x8(%rsp), %rax
andb $0x1, %cl
movb %cl, 0x62(%rax)
movq 0xa8(%rsp), %rcx
movq 0x8(%rsp), %rax
movq %rcx, 0x40(%rax)
movsd 0x18(%rsp), %xmm0
movq 0x8(%rsp), %rax
movsd %xmm0, 0x98(%rax)
movq 0x10(%rsp), %rax
addq $0x68, %rsp
retq
nopw %cs:(%rax,%rax)