// File: /workspace/github_cpp_makefile_star2_O3/ridgelab[P]Kmer-SSR/src/Arguments.cpp
// Function: Arguments::Arguments(int, char**)
Arguments::Arguments(int argc, char* argv[])
{
	this->input_file_name = "/dev/stdin";
	this->output_file_name = "/dev/stdout";

	this->allow_non_atomic = false;
	this->display_progress_bar = true;
	this->exhaustive = false;

	this->bzipped2_input = false;
	this->bzipped2_output = false;
	this->gzipped_input = false;
	this->gzipped_output = false;

	this->threads = 1;

	this->help_displayed = false;
	this->version_displayed = false;

	this->usage_message = USAGE_MESSAGE; // defined in usage.h
	this->help_message = HELP_MESSAGE;   // defined in help.h
	this->version = VERSION;             // defined in version.h

	this->alphabet = new unordered_set<char>();
	this->periods = new set<uint32_t, bool(*)(uint32_t,uint32_t)>(reverseOrderPointer);
	this->enumerated_ssrs = new unordered_set<string>();

	this->processArgs(argc, argv);
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x38, %rsp
movq %rdx, %r13
movl %esi, %ebp
movq %rdi, %rbx
leaq 0x10(%rdi), %rax
movq %rax, 0x28(%rsp)
leaq 0x20(%rdi), %rax
movq %rax, 0x18(%rsp)
movq %rax, 0x10(%rdi)
xorl %eax, %eax
movq %rax, 0x18(%rdi)
movb %al, 0x20(%rdi)
leaq 0x30(%rdi), %rcx
movq %rcx, 0x20(%rsp)
leaq 0x40(%rdi), %rcx
movq %rcx, 0x10(%rsp)
movq %rcx, 0x30(%rdi)
movq %rax, 0x38(%rdi)
movb %al, 0x40(%rdi)
addq $0x58, %rdi
leaq 0x68(%rbx), %rcx
movq %rcx, 0x8(%rsp)
movq %rcx, 0x58(%rbx)
movq %rax, 0x60(%rbx)
movb %al, 0x68(%rbx)
leaq 0x88(%rbx), %r12
leaq 0x98(%rbx), %rcx
movq %rcx, (%rsp)
movq %rcx, 0x88(%rbx)
movq %rax, 0x90(%rbx)
movb %al, 0x98(%rbx)
leaq 0xd0(%rbx), %r14
leaq 0xe0(%rbx), %r15
movq %r15, 0xd0(%rbx)
movq %rax, 0xd8(%rbx)
movb %al, 0xe0(%rbx)
leaq 0x403d(%rip), %rcx      # 0xe22c
movl $0xa, %r8d
movq %rdi, 0x30(%rsp)
xorl %esi, %esi
xorl %edx, %edx
callq 0x3470
movq 0x90(%rbx), %rdx
leaq 0x41ff(%rip), %rcx      # 0xe410
movl $0xb, %r8d
movq %r12, %rdi
xorl %esi, %esi
callq 0x3470
movw $0x0, 0xc(%rbx)
movl $0x1000000, 0x8(%rbx)   # imm = 0x1000000
xorl %eax, %eax
movb %al, 0xe(%rbx)
movl $0x1, 0xc8(%rbx)
movb %al, 0x50(%rbx)
movb %al, 0xcc(%rbx)
movq 0x18(%rbx), %rdx
leaq 0x41cb(%rip), %rcx      # 0xe41c
movl $0xc5, %r8d
movq 0x28(%rsp), %rdi
xorl %esi, %esi
callq 0x3470
movq 0x38(%rbx), %rdx
leaq 0x4274(%rip), %rcx      # 0xe4e2
movl $0xd12, %r8d            # imm = 0xD12
movq 0x20(%rsp), %rdi
xorl %esi, %esi
callq 0x3470
movq 0xd8(%rbx), %rdx
leaq 0x4f67(%rip), %rcx      # 0xf1f5
movl $0xb, %r8d
movq %r14, %rdi
xorl %esi, %esi
callq 0x3470
movl $0x38, %edi
callq 0x32f0
xorps %xmm0, %xmm0
movaps %xmm0, 0x20(%rax)
movq %rax, %rcx
addq $0x30, %rcx
movq %rcx, (%rax)
movq $0x1, 0x8(%rax)
movups %xmm0, 0x10(%rax)
movl $0x3f800000, 0x20(%rax) # imm = 0x3F800000
movups %xmm0, 0x28(%rax)
movq %rax, (%rbx)
movl $0x30, %edi
callq 0x32f0
movq 0xb034(%rip), %rcx      # 0x15318
movq %rcx, (%rax)
movq %rax, %rcx
addq $0x8, %rcx
movl $0x0, 0x8(%rax)
xorl %edx, %edx
movq %rdx, 0x10(%rax)
movq %rcx, 0x18(%rax)
movq %rcx, 0x20(%rax)
movq %rdx, 0x28(%rax)
movq %rax, 0xa8(%rbx)
movl $0x38, %edi
callq 0x32f0
xorps %xmm0, %xmm0
movaps %xmm0, 0x20(%rax)
movq %rax, %rcx
addq $0x30, %rcx
movq %rcx, (%rax)
movq $0x1, 0x8(%rax)
movups %xmm0, 0x10(%rax)
movl $0x3f800000, 0x20(%rax) # imm = 0x3F800000
movups %xmm0, 0x28(%rax)
movq %rax, 0xc0(%rbx)
movq %rbx, %rdi
movl %ebp, %esi
movq %r13, %rdx
callq 0xa3f8
addq $0x38, %rsp
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq %rax, %rbx
movq (%r14), %rdi
cmpq %r15, %rdi
je 0xa379
movq (%r15), %rsi
incq %rsi
callq 0x3300
movq (%r12), %rdi
cmpq (%rsp), %rdi
je 0xa392
movq (%rsp), %rax
movq (%rax), %rsi
incq %rsi
callq 0x3300
movq 0x30(%rsp), %rax
movq (%rax), %rdi
cmpq 0x8(%rsp), %rdi
je 0xa3b1
movq 0x8(%rsp), %rax
movq (%rax), %rsi
incq %rsi
callq 0x3300
movq 0x20(%rsp), %rax
movq (%rax), %rdi
cmpq 0x10(%rsp), %rdi
je 0xa3d0
movq 0x10(%rsp), %rax
movq (%rax), %rsi
incq %rsi
callq 0x3300
movq 0x28(%rsp), %rax
movq (%rax), %rdi
cmpq 0x18(%rsp), %rdi
je 0xa3ef
movq 0x18(%rsp), %rax
movq (%rax), %rsi
incq %rsi
callq 0x3300
movq %rbx, %rdi
callq 0x3540
nop