// File: /workspace/github_cpp_makefile_star2_O1/millanek[P]evo/evo_diversity_subsampling.cpp
// Function: parseSubsamplingDxyOptions(int, char**)
void parseSubsamplingDxyOptions(int argc, char** argv) {
    bool die = false;
    for (char c; (c = getopt_long(argc, argv, shortopts, longopts, NULL)) != -1;)
    {
        std::istringstream arg(optarg != NULL ? optarg : "");
        switch (c)
        {
            case '?': die = true; break;
            case 's': arg >> opt::subsampleLength; break;
            case 'e': opt::bElements = true; break;
            case OPT_FOLDER: arg >> opt::outFolder; break;
            case 'h':
                std::cout << SUBSAMPLED_DXY_USAGE_MESSAGE;
                exit(EXIT_SUCCESS);
        }
    }
    
    if (argc - optind < 2) {
        std::cerr << "missing arguments\n";
        die = true;
    }
    else if (argc - optind > 2)
    {
        std::cerr << "too many arguments\n";
        die = true;
    }
    
    if (die) {
        std::cout << "\n" << SUBSAMPLED_DXY_USAGE_MESSAGE;
        exit(EXIT_FAILURE);
    }
    opt::bedFile = argv[optind++];
    opt::vcfFile = argv[optind++];
}

// Assembly:
pushq %rbp
pushq %r15
pushq %r14
pushq %r13
pushq %r12
pushq %rbx
subq $0x1b8, %rsp            # imm = 0x1B8
movl %edi, %ebp
leaq 0x9d3d4(%rip), %rdx     # 0xce209
leaq 0xd7814(%rip), %rcx     # 0x108650
movq $0x0, 0x8(%rsp)
movq %rsi, 0x10(%rsp)
xorl %r8d, %r8d
callq 0x8770
movl %eax, %r14d
shll $0x18, %r14d
cmpl $0xff000000, %r14d      # imm = 0xFF000000
je 0x30f85
leaq 0x28(%rsp), %rbx
movq $0x0, 0x8(%rsp)
leaq 0x18(%rsp), %r15
leaq 0x38(%rsp), %r12
movq 0xda0fb(%rip), %rax     # 0x10af80
movq (%rax), %r13
testq %r13, %r13
leaq 0xa0ded(%rip), %rax     # 0xd1c7f
cmoveq %rax, %r13
movq %rbx, 0x18(%rsp)
movq %r13, %rdi
callq 0x81f0
leaq (%rax,%r13), %rdx
movq %r15, %rdi
movq %r13, %rsi
callq 0x28952
movq %r12, %rdi
movq %r15, %rsi
movl $0x8, %edx
callq 0x87b0
movq 0x18(%rsp), %rdi
cmpq %rbx, %rdi
je 0x30ed9
movq 0x28(%rsp), %rsi
incq %rsi
callq 0x8480
sarl $0x18, %r14d
cmpl $0x64, %r14d
jle 0x30f00
cmpl $0x65, %r14d
je 0x30f25
cmpl $0x73, %r14d
jne 0x30f2e
movq %r12, %rdi
leaq 0xda5cf(%rip), %rsi     # 0x10b4c8
callq 0x82b0
jmp 0x30f38
testl %r14d, %r14d
je 0x30f14
cmpl $0x3f, %r14d
jne 0x30f38
movb $0x1, %al
movq %rax, 0x8(%rsp)
jmp 0x30f38
movq %r12, %rdi
leaq 0xda882(%rip), %rsi     # 0x10b7a0
callq 0x8560
jmp 0x30f38
movb $0x1, 0xda894(%rip)     # 0x10b7c0
jmp 0x30f38
cmpl $0x68, %r14d
je 0x31054
movq %r12, %rdi
movq 0xda056(%rip), %rsi     # 0x10af98
callq 0x8620
leaq 0xb0(%rsp), %rdi
callq 0x8190
movl %ebp, %edi
movq 0x10(%rsp), %rsi
leaq 0x9d2a7(%rip), %rdx     # 0xce209
leaq 0xd76e7(%rip), %rcx     # 0x108650
xorl %r8d, %r8d
callq 0x8770
movl %eax, %r14d
shll $0x18, %r14d
cmpl $0xff000000, %r14d      # imm = 0xFF000000
jne 0x30e7e
movq 0xda034(%rip), %rbx     # 0x10afc0
subl (%rbx), %ebp
cmpl $0x2, %ebp
jge 0x30fa8
movq 0xda04e(%rip), %rdi     # 0x10afe8
leaq 0x9d211(%rip), %rsi     # 0xce1b2
movl $0x12, %edx
jmp 0x30fc2
movq 0x8(%rsp), %rax
je 0x30fc9
movq 0xda032(%rip), %rdi     # 0x10afe8
leaq 0x9d208(%rip), %rsi     # 0xce1c5
movl $0x13, %edx
callq 0x84e0
movb $0x1, %al
testb $0x1, %al
jne 0x3106e
movslq (%rbx), %rax
leal 0x1(%rax), %ecx
movl %ecx, (%rbx)
movq 0x10(%rsp), %r13
movq (%r13,%rax,8), %r14
movq 0xda77e(%rip), %r15     # 0x10b768
leaq 0xda76f(%rip), %r12     # 0x10b760
movq %r14, %rdi
callq 0x81f0
movq %r12, %rdi
xorl %esi, %esi
movq %r15, %rdx
movq %r14, %rcx
movq %rax, %r8
callq 0x86c0
movslq (%rbx), %rax
leal 0x1(%rax), %ecx
movl %ecx, (%rbx)
movq (%r13,%rax,8), %rbx
movq 0xda768(%rip), %r14     # 0x10b788
leaq 0xda759(%rip), %r15     # 0x10b780
movq %rbx, %rdi
callq 0x81f0
movq %r15, %rdi
xorl %esi, %esi
movq %r14, %rdx
movq %rbx, %rcx
movq %rax, %r8
callq 0x86c0
addq $0x1b8, %rsp            # imm = 0x1B8
popq %rbx
popq %r12
popq %r13
popq %r14
popq %r15
popq %rbp
retq
movq 0xd9f5d(%rip), %rdi     # 0x10afb8
leaq 0x9d1c9(%rip), %rsi     # 0xce22b
callq 0x8460
xorl %edi, %edi
callq 0x8530
movq 0xd9f43(%rip), %rdi     # 0x10afb8
leaq 0x9b601(%rip), %rsi     # 0xcc67d
callq 0x8460
leaq 0x9d1a3(%rip), %rsi     # 0xce22b
movq %rax, %rdi
callq 0x8460
movl $0x1, %edi
callq 0x8530
jmp 0x3109c
movq %rax, %r14
movq 0xd9ef2(%rip), %rsi     # 0x10af98
leaq 0x38(%rsp), %rdi
callq 0x8620
leaq 0xb0(%rsp), %rdi
callq 0x8190
jmp 0x310de
movq %rax, %r14
jmp 0x310de
movq %rax, %r14
movq 0x18(%rsp), %rdi
cmpq %rbx, %rdi
je 0x310de
movq 0x28(%rsp), %rsi
incq %rsi
callq 0x8480
movq %r14, %rdi
callq 0x8840