IDEA-AI4S/PubChemSFT huggingface dataset:
Molecule SMILES: CCC=CCC=CCC=CCC=CCC=CCC=CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)([O-])OP(=O)([O-])OCC1OC(n2cnc3c(N)ncnc32)C(O)C1OP(=O)([O-])[O-]

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Please give me some details about this molecule <molecule_2d> .

assistant: (14Z,17Z,20Z,23Z,26Z,29Z)-3-oxodotriacontahexaenoyl-CoA(4-) is a 3-oxo-fatty acyl-CoA(4-) arising from deprotonation of the phosphate and diphosphate functions of (14Z,17Z,20Z,23Z,26Z,29Z)-3-oxodotriacontahexaenoyl-CoA. It is a 3-oxo-fatty acyl-CoA(4-), an 11,12-saturated fatty acyl-CoA(4-) and an ultra-long-chain 3-oxoacyl-CoA(4-). It is a conjugate base of a (14Z,17Z,20Z,23Z,26Z,29Z)-3-oxodotriacontahexaenoyl-CoA.
Molecule SMILES: CC1OC2OC1Cc1cccc(O)c12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> What do you know about the molecule?

assistant: Eutyscoparol E is a natural product found in Peroneutypa scoparia with data available.
Molecule SMILES: CCCCC(O)C=CC(=O)OC1C(C)OC(=O)C(C)C(OC(C)=O)C(C)(O)C(O)C1C

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: I'd like a short overview about this molecule <molecule_2d>. Can you do that?

assistant: (7-Acetyloxy-5,6-dihydroxy-2,4,6,8-tetramethyl-9-oxooxonan-3-yl) 4-hydroxyoct-2-enoate is a natural product found in Botrytis cinerea with data available.
Molecule SMILES: COc1ccc(Cc2nc(N=C3NC(=O)N(C)C3=O)n(C)c2Cc2ccc(OC)c(OC)c2O)cc1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: Pyronaamidine is a natural product found in Leucetta chagosensis and Notodoris gardineri with data available.
Molecule SMILES: Cc1cn(C2CC(O)C(COP(=O)(O)OP(=O)(O)OC3OC(C)C(O)C(=O)C3O)O2)c(=O)[nH]c1=O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you give me a brief overview of this molecule <molecule_2d> ?

assistant: [(2R,5R)-3,5-dihydroxy-6-methyl-4-oxooxan-2-yl] [hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate is a natural product found in Streptomyces fradiae with data available.
Molecule SMILES: O=C1c2cccc3c(N4CCCCC4)ccc(c23)C(=O)N1c1cccc(O)c1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a description of this molecule <molecule_2d> .

assistant: 2-(3-hydroxyphenyl)-6-(1-piperidinyl)benzo[de]isoquinoline-1,3-dione is a member of isoquinolines.
Molecule SMILES: CCC=C1CC2C(OC)Nc3ccc(OC4OC(C)C(NC)C(C)(O)C4O)cc3C(=O)N2C1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Describe this molecule: <molecule_2d> .

assistant: (6S,6aS,8Z)-2-[(2S,3S,4R,5S,6R)-3,4-dihydroxy-4,6-dimethyl-5-(methylamino)oxan-2-yl]oxy-6-methoxy-8-propylidene-6,6a,7,9-tetrahydro-5H-pyrrolo[2,1-c][1,4]benzodiazepin-11-one is a natural product found in Streptomyces with data available.
Molecule SMILES: CC(=O)OC1C=C(C)C2C3OC(=O)C(C)(OC(C)=O)C3C(OC(=O)C=C(C)C)CC(C)(OC(C)=O)C12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a brief overview of this molecule <molecule_2d> .

assistant: [(3S,3aR,4S,6S,6aR,7R,9aS,9bS)-3,6,7-triacetyloxy-3,6,9-trimethyl-2-oxo-4,5,6a,7,9a,9b-hexahydro-3aH-azuleno[4,5-b]furan-4-yl] 3-methylbut-2-enoate is a natural product found in Thapsia villosa with data available.
Molecule SMILES: OCC(O)C1OC(OCC2OC(O)C(O)C(O)C2O)C(O)C1O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a brief overview of this molecule <molecule_2d> .

assistant: Galf(b1-6)b-Gal is a natural product found in Mycoplasma mycoides with data available.
Molecule SMILES: C=CC(C)(C)C12CC3C(=O)NC(Cc4ccccc4)C(=O)N3C1N(C(C)=O)c1ccccc12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Given the molecule <molecule_2d>, what can you tell me about it?

assistant: Puberulin is a natural product found in Agathosma martiana and Penicillium aurantiogriseum with data available.
Molecule SMILES: COc1cc2c(c(O)c1OC)CN(C)CC2

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: Anhalidine is a natural product found in Lophophora williamsii, Senegalia berlandieri, and other organisms with data available.
Molecule SMILES: CC(=O)C=CC12OC1(C)CC(O)CC2(C)C

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Please give me some details about this molecule <molecule_2d> .

assistant: (3S,5R,6S,7E)-5,6-Epoxy-3-hydroxy-7-megastigmen-9-one is a natural product found in Cestrum parqui, Jacobaea argunensis, and other organisms with data available.
Molecule SMILES: COC(=O)C1(C)Nc2c(O)cc3c(c2C1=O)C(CCl)CN3C(=O)c1cc2cc(OC)c(OC)c(OC)c2[nH]1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> What do you know about the molecule?

assistant: Pyrindamycin A is a natural product found in Streptomyces with data available.
Molecule SMILES: C=C1CC(O)C2C(C)(CCC2(O)C(C)C)CC1O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Given the molecule <molecule_2d>, what can you tell me about it?

assistant: (1R,3aR,5S,8S,8aS)-3a-methyl-6-methylidene-1-propan-2-yl-3,4,5,7,8,8a-hexahydro-2H-azulene-1,5,8-triol is a natural product found in Ferula sinaica with data available.
Molecule SMILES: O=CC(O)C(O)C(OC1OC(CO)C(O)C(OC2CC(CO)C(O)C(O)C2O)C1O)C(O)CO

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you give me a brief overview of this molecule <molecule_2d> ?

assistant: Isoglobotriaose is an O-acyl carbohydrate.
Molecule SMILES: CCCCC=CCCCCCCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCC)COP(=O)(O)O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: PA(16:0/14:1(9Z)) is a 1,2-diacyl-sn-glycerol 3-phosphate.
Molecule SMILES: CC=C(C)C(=O)OC1CC(C)(O)C2=C(C3OC(=O)C(C)C13)C(C)(O)CC2=O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a brief overview of this molecule <molecule_2d> .

assistant: 2-Methyl-2-butenoic acid [(3aR)-2,3,3abeta,4,5,6,7,8,9,9balpha-decahydro-2,7-dioxo-6alpha,9beta-dihydroxy-3beta,6,9-trimethylazuleno[4,5-b]furan]-4beta-yl ester is a natural product found in Achillea collina with data available.
Molecule SMILES: O=c1ccc2cc(CCO)c(O)cc2o1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you provide a description of this molecule <molecule_2d> ?

assistant: Phellodenol A is a natural product found in Fatoua pilosa, Phellodendron chinense var. glabriusculum, and other organisms with data available.
Molecule SMILES: CCCCCCCC(=O)NC(COC1OC(CO)C(O)C(O)C1O)C(O)C(O)CCCC(=O)NCCCCCCc1ccccc1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you provide a description of this molecule <molecule_2d> ?

assistant: (5R,6S,7S)-5,6-dihydroxy-8-(alpha-D-galactosyloxy)-7-octanamido-N-(6-phenylhexyl)octanamide is a synthetic alpha-galactosylsphingamide in which the galactose ring carries a (2S,3S,4R)-3,4-dihydroxy-2-(octanoylamino)-8-oxo-8-[(6-phenylhexyl)amino]octyl moiety at O-1.
Molecule SMILES: COCc1ccc(C)c2c1C(=O)C(O)C(C(C)(C)O)C2

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you give me a brief overview of this molecule <molecule_2d> ?

assistant: (2S,3R)-2-hydroxy-3-(2-hydroxypropan-2-yl)-8-(methoxymethyl)-5-methyl-3,4-dihydro-2H-naphthalen-1-one is a natural product found in Emmotum nitens with data available.
Molecule SMILES: COc1ccc(C(Cl)=C(c2ccc(OC)cc2)c2ccc(OC)cc2)cc1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> What do you know about the molecule?

assistant: Small white crystals or white powder. Softens at 226 °F. Odorless. (NTP, 1992)
Molecule SMILES: COc1ccc(C(Cl)=C(c2ccc(OC)cc2)c2ccc(OC)cc2)cc1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Given the molecule <molecule_2d>, what can you tell me about it?

assistant: Chlorotrianisene is a chloroalkene. It has a role as an estrogen receptor modulator, an antineoplastic agent and a xenoestrogen. It derives from a hydride of a stilbene.
Molecule SMILES: COc1ccc(C(Cl)=C(c2ccc(OC)cc2)c2ccc(OC)cc2)cc1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> The above is a compound. Could you please tell me something about it?

assistant: Chlorotrianisene is an orally bioavailable, highly lipophilic, synthetic triphenylethylene (TPE) derivative and selective estrogen receptor modulator (SERM), with predominantly estrogenic but also antiestrogenic activities. Upon administration, chlorotrianisene binds to estrogen receptors (ER) and, depending on the responsive target cells, either activates or blocks ER activity. This modulates the expression of ER-responsive genes in a tissue-specific manner. This agent may increase bone mineral density, modify the lipid profile and ameliorate vasomotor symptoms. Chlorotrianisene inhibits the pituitary secretion of the gonadotropins luteinizing hormone (LH) and follicle-stimulating hormone (FSH) through a negative feedback mechanism.
Molecule SMILES: CC=C(C)C(=O)OC1CC=C(C)CCC2C(C=C1C)C2(C)C

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Describe this molecule: <molecule_2d> .

assistant: [(1S,2E,4S,6E,10R)-3,7,11,11-tetramethyl-4-bicyclo[8.1.0]undeca-2,6-dienyl] (Z)-2-methylbut-2-enoate is a natural product found in Othonna with data available.
Molecule SMILES: COC1CN(C)C(=O)c2cc(NC(C)=O)ccc2OCC(C)N(Cc2cccc(F)c2)CC1C

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a brief overview of this molecule <molecule_2d> .

assistant: N-[(4S,7R,8S)-5-[(3-fluorophenyl)methyl]-8-methoxy-4,7,10-trimethyl-11-oxo-2-oxa-5,10-diazabicyclo[10.4.0]hexadeca-1(12),13,15-trien-14-yl]acetamide is a lactam and an azamacrocycle.
Molecule SMILES: C=C1C=CC(C2(C)CCCC2(C)C)CC1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: beta-Cuprenene is a natural product found in Widdringtonia whytei with data available.
Molecule SMILES: C=C(C)C(O)CCC(C)(O)C1CCC2(C)C1CCC1C3(C)C(O)C(O)C(OC4OC(COC(C)=O)C(O)C(O)C4O)C(C)(C)C3CCC12C

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> The above is a compound. Could you please tell me something about it?

assistant: [(2R,3S,4S,5R,6R)-6-[[(1S,2R,3R,5S,8R,9S,10R,13R,14R,17S)-17-[(2R,5R)-2,5-dihydroxy-6-methylhept-6-en-2-yl]-1,2-dihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-3,4,5-trihydroxyoxan-2-yl]methyl acetate is a natural product found in Rhoiptelea chiliantha with data available.
Molecule SMILES: CC(C=CC1(O)C(C)(C)CCCC1(C)O)=CC(=O)O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a description of this molecule <molecule_2d> .

assistant: 5-(1,2-Dihydroxy-2,6,6-trimethylcyclohexyl)-3-methylpenta-2,4-dienoic acid is a natural product found in Aeginetia with data available.
Molecule SMILES: Oc1ccc(C2Oc3c(c(O)cc4c3C3c5c(O)cc6c(c5OC(c5ccc(O)cc5)(O4)C3O)C3c4c(O)cc(O)cc4OC(c4ccc(O)cc4)(O6)C3O)CC2O)cc1

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Describe this molecule: <molecule_2d> .

assistant: 7,19,27-Tris(4-hydroxyphenyl)-6,8,18,20,28-pentaoxaoctacyclo[17.11.1.17,15.02,17.05,16.09,14.021,30.024,29]dotriaconta-2(17),3,5(16),9,11,13,21(30),22,24(29)-nonaene-3,11,13,23,26,31,32-heptol is a natural product found in Geranium with data available.
Molecule SMILES: O=S(=O)(NCCCCCCc1ccccc1)c1cccc2c(Cl)cccc12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a description of this molecule <molecule_2d> .

assistant: 5-chloro-N-(6-phenylhexyl)-1-naphthalenesulfonamide is a member of naphthalenes and a sulfonic acid derivative.
Molecule SMILES: C=CC(C)(C)c1cc2c(=O)c3cc(O)c(O)cc3oc2c(C=CC(C)C)c1OC

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Describe this molecule: <molecule_2d> .

assistant: 6,7-dihydroxy-3-methoxy-2-(2-methylbut-3-en-2-yl)-4-[(E)-3-methylbut-1-enyl]xanthen-9-one is a natural product found in Maclura tricuspidata with data available.
Molecule SMILES: CC1=CCC2OC2(C)CCC(C(C)(C)O)OC(=O)c2ccc(O)c(c2)CC2=C(C)CCC12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: (7R,8E,11S,13S,16S)-22-hydroxy-16-(2-hydroxypropan-2-yl)-4,8,13-trimethyl-12,17-dioxatetracyclo[17.3.1.03,7.011,13]tricosa-1(22),3,8,19(23),20-pentaen-18-one is a natural product found in Callophycus serratus with data available.
Molecule SMILES: C=C1CC(O)C2C(=C)C(=O)OC2C2C(=C)C(OC3OC(CO)C(O)C(O)C3O)CC12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Given the molecule <molecule_2d>, what can you tell me about it?

assistant: Crepiside E is a natural product found in Lapsana communis and Elephantopus scaber with data available.
Molecule SMILES: COc1cc2c(cc1O)CC1NCCc3cc(O)c(OC)c-2c31

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Given the molecule <molecule_2d>, what can you tell me about it?

assistant: (6aR)-1,10-dimethoxy-5,6,6a,7-tetrahydro-4H-dibenzo[de,g]quinoline-2,9-diol is a natural product found in Phoebe grandis and Lindera glauca with data available.
Molecule SMILES: CCC(C)C1NC(=O)C(CC(C)C)NC(=O)C(Cc2ccccc2)NC(=O)C2CCCN2C(=O)C(Cc2ccccc2)NC(=O)C(CC(C)C)NC1=O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: I'd like a short overview about this molecule <molecule_2d>. Can you do that?

assistant: Phepropeptin D is a natural product found in Streptomyces with data available.
Molecule SMILES: C#CC=CCC1OC(C(Br)CC)CCC=CCC1Cl

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> What do you know about the molecule?

assistant: (2S,3S,5Z,9R)-9-[(1S)-1-bromopropyl]-3-chloro-2-[(Z)-pent-2-en-4-ynyl]-2,3,4,7,8,9-hexahydrooxonine is a natural product found in Osmundea ramosissima, Laurencia pinnatifida, and other organisms with data available.
Molecule SMILES: Cn1c(=O)c2ncn(C3OC(COP(=O)(O)O)C(O)C(O)C3O)c2n(C)c1=O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> The above is a compound. Could you please tell me something about it?

assistant: [(2R,3S,4S,5R,6R)-6-(1,3-dimethyl-2,6-dioxopurin-9-yl)-3,4,5-trihydroxyoxan-2-yl]methyl dihydrogen phosphate is a natural product found in Cicer arietinum with data available.
Molecule SMILES: COc1ccc(C(=O)c2cc(O)c(OC)cc2O)cc1O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Please give me some details about this molecule <molecule_2d> .

assistant: Melanoxoin is a member of benzophenones. It has a role as a metabolite.
Molecule SMILES: COc1ccc(C(=O)c2cc(O)c(OC)cc2O)cc1O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Please give me some details about this molecule <molecule_2d> .

assistant: Melanoxoin is a natural product found in Pterocarpus santalinus and Dalbergia melanoxylon with data available.
Molecule SMILES: CC(CCCC(CO)C(=O)O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Please give me some details about this molecule <molecule_2d> .

assistant: 3alpha,7alpha,12alpha,26-Tetrahydroxy-5alpha-cholestan-27-oic acid is a bile acid.
Molecule SMILES: C=C1C(=O)OC2CC(C)C3CCC(OC(C)=O)C3(CO)CC12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a brief overview of this molecule <molecule_2d> .

assistant: 4-O-Acetylrudmollin is a natural product found in Rudbeckia mollis with data available.
Molecule SMILES: C=C1C(=O)C23C4CC5C(C)(C)CCCC5(C(O)O4)C2C(O)CC1C3O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a brief overview of this molecule <molecule_2d> .

assistant: (1S,2S,3S,5S,8S,9S,11R,16S,18R)-3,16,18-trihydroxy-12,12-dimethyl-6-methylidene-17-oxapentacyclo[7.6.2.15,8.01,11.02,8]octadecan-7-one is a natural product found in Isodon rubescens with data available.
Molecule SMILES: C[N+](C)(C)[O-]

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: <molecule_2d> The above is a compound. Could you please tell me something about it?

assistant: Trimethylamine N-oxide is a tertiary amine oxide resulting from the oxidation of the amino group of trimethylamine. It has a role as an osmolyte, a metabolite and an Escherichia coli metabolite. It is functionally related to a trimethylamine. It is a conjugate base of a hydroxytrimethylaminium.
Molecule SMILES: C[N+](C)(C)[O-]

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a description of this molecule <molecule_2d> .

assistant: Trimethylamine N-Oxide is a metabolite found in or produced by Escherichia coli (strain K12, MG1655).
Molecule SMILES: C[N+](C)(C)[O-]

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you give me a brief overview of this molecule <molecule_2d> ?

assistant: Trimethylamine oxide is a natural product found in Vitis vinifera, Euglena gracilis, and other organisms with data available.
Molecule SMILES: C[N+](C)(C)[O-]

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: TMAO is a uremic toxin, an osmolyte and an atherotoxin (causing atherosclerotic plaques). Uremic toxins can be subdivided into three major groups based upon their chemical and physical characteristics: 1) small, water-soluble, non-protein-bound compounds, such as urea; 2) small, lipid-soluble and/or protein-bound compounds, such as the phenols and 3) larger so-called middle-molecules, such as beta2-microglobulin. Chronic exposure of uremic toxins can lead to a number of conditions including renal damage, chronic kidney disease and cardiovascular disease. Trimethylamine N-oxide (TMAO) is an oxidation product of trimethylamine and a common metabolite in animals and humans. In particular, trimethylamine-N-oxide is biosynthesized endogenously from trimethylamine, which is derived from choline, which can be derived from dietary lecithin (phosphatidylcholines) or dietary carnitine. TMAO decomposes to trimethylamine (TMA), which is the main odorant that is characteristic of degrading seafood. TMAO is an osmolyte that the body will use to counteract the effects of increased concentrations of urea (due to kidney failure) and high levels can be used as a biomarker for kidney problems. Fish odor syndrome or trimethylaminuria is a defect in the production of the enzyme flavin containing monooxygenase 3 (FMO3) causing incomplete breakdown of trimethylamine from choline-containing food into trimethylamine oxide. Trimethylamine then builds up and is released in the person's sweat, urine, and breath, giving off a strong fishy odor. The concentration of TMAO in the blood increases after consuming foods containing carnitine or lecithin (phosphatidylcholines), if the bacteria that convert those substances to TMAO are present in the gut. High concentrations of carnitine are found in red meat, some energy drinks, and certain dietary supplements; lecithin is found in eggs and is commonly used as an ingredient in processed food. High levels of TMAO are found in many seafoods. Some types of normal gut bacteria (e.g. species of Acinetobacter) in the human gut convert dietary carnitine and dietary lecithin to TMAO. TMAO alters cholesterol metabolism in the intestines, in the liver and in arterial wall. When TMAO is present, cholesterol metabolism is altered and there is an increased deposition of cholesterol within, and decreased removal of cholesterol from, peripheral cells such as those in the artery wall (1, 2, 3).
Molecule SMILES: CCC(C)C(NC(=O)C(CCCN=C(N)N)NC(=O)C(N)C(C)C)C(=O)NCC(=O)NC(Cc1cnc[nH]1)C(=O)NC(CC(C)C)C(=O)NC(Cc1ccc(O)cc1)C(=O)NC(C(=O)NC(CC(C)C)C(=O)O)C(C)CC

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Provide a description of this molecule <molecule_2d> .

assistant: MAGE-12: 170-178 Peptide is a synthetic peptide consisting of the amino acids 170 through 178 of the MAGE-12 melanoma antigen.  MAGE-12 170-178 has been identified as an epitope recognized by tumor infiltrating lymphocytes (TIL).  Vaccination with MAGE-12 170-178 stimulate the host immune system to mount a TIL response against tumor cells expressing MAGE-12, potentially resulting in decreased tumor growth. (NCI04)
Molecule SMILES: O=C(O)c1cc(C(=O)O)c2c(c1)C(=O)c1c(O)cccc1C2=O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Could you give me a brief overview of this molecule <molecule_2d> ?

assistant: 5-hydroxyanthraquinone-1,3-dicarboxylic acid is a monohydroxyanthraquinone.
Molecule SMILES: Cc1cc(O)c2c(c1)C(=O)C(c1c(C)cc(O)c3c1C(=O)C=CC3=O)=CC2=O

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: I'd like a short overview about this molecule <molecule_2d>. Can you do that?

assistant: 8-Hydroxy-5-(5-hydroxy-7-methyl-1,4-dioxonaphthalen-2-yl)-6-methylnaphthalene-1,4-dione is a natural product found in Diospyros kaki and Euclea natalensis with data available.
Molecule SMILES: C=C1CCCC(C)(C)C2C=C(C)CCC12

system: You are a chemist. Now you are given a representation of a molecule. Please help me to understand the molecule.

user: Tell me something about this molecule: <molecule_2d>

assistant: (1S,6R)-alpha-himachalene is a cis-alpha-himachalene. It is an enantiomer of a (1R,6S)-alpha-himachalene.