Model: alpha-brain/pubmed-stsb-distilbert-base-mnrl
Author: alpha-brain
Pipeline: sentence-similarity
Library: sentence-transformers
Tags: sentence-transformers, safetensors, distilbert, sentence-similarity, feature-extraction, generated_from_trainer, dataset_size:622302, loss:MultipleNegativesRankingLoss, arxiv:1908.10084, arxiv:1705.00652, base_model:sentence-transformers/stsb-distilbert-base, base_model:finetune:sentence-transformers/stsb-distilbert-base, model-index, text-embeddings-inference, endpoints_compatible, region:us
Base models (finetune): id: sentence-transformers/stsb-distilbert-base
Card metadata: base_model: sentence-transformers/stsb-distilbert-base
library_name: sentence-transformers
metrics: cosine_accuracy@1, cosine_accuracy@3, cosine_accuracy@5, cosine_accuracy@10, cosine_precision@1, cosine_precision@3, cosine_precision@5, cosine_precision@10, cosine_recall@1, cosine_recall@3, cosine_recall@5, cosine_recall@10, cosine_ndcg@10, cosine_mrr@10, cosine_map@100, dot_accuracy@1, dot_accuracy@3, dot_accuracy@5, dot_accuracy@10, dot_precision@1, dot_precision@3, dot_precision@5, dot_precision@10, dot_recall@1, dot_recall@3, dot_recall@5, dot_recall@10, dot_ndcg@10, dot_mrr@10, dot_map@100
pipeline_tag: sentence-similarity
tags: sentence-transformers, sentence-similarity, feature-extraction, generated_from_trainer, dataset_size:622302, loss:MultipleNegativesRankingLoss
widget: source_sentence: Does fTO Genotype interact with Improvement in Aerobic Fitness on Body Weight Loss During Lifestyle Intervention?
sentences: The study population count 46 550 male workers, 1670 (3.6%) of whom incurred at least one work-related injury requiring admission to hospital within a period of 5 years following hearing tests conducted between 1987 and 2005. The noise exposure and hearing loss-related data were gathered during occupational noise-induced hearing loss (NIHL) screening. The hospital data were used to identify all members of the study population who were admitted, and the reason for admission. Finally, access to the death-related data made it possible to identify participants who died during the course of the study. Cox proportional hazards model taking into account hearing status, noise levels, age and cumulative duration of noise exposure at the time of the hearing test established the risk of work-related injuries leading to admission to hospital., Carriers of a hereditary mutation in BRCA are at high risk for breast and ovarian cancer. The first person from a family known to carry the mutation, the index person, has to share genetic information with relatives. This study is aimed at determining the number of relatives tested for a BRCA mutation, and the exploration of facilitating and debilitating factors in the transmission of genetic information from index patient to relatives., Not every participant responds with a comparable body weight loss to lifestyle intervention, despite the same compliance. Genetic factors may explain parts of this difference. Variation in fat mass and obesity-associated gene (FTO) is the strongest common genetic determinant of body weight. The aim of the present study was to evaluate the impact of FTO genotype differences in the link between improvement of fitness and reduction of body weight during a lifestyle intervention., source_sentence: Is family history of exceptional longevity associated with lower serum uric acid levels in Ashkenazi Jews?
sentences: To evaluate the effect of fasting on gastric emptying in mice., To test whether lower serum uric acid (UA) levels are associated with longevity independent of renal function., Inducible NOS mRNA expression was significantly lower in CF patients with and without bacterial infection than in healthy children (0.22 and 0.23 v 0.76; p=0.002 and p=0.01, respectively). Low levels of iNOS gene expression were accompanied by low levels of iNOS protein expression as detected by Western blot analysis., source_sentence: Do hepatocellular carcinomas compromise quantitative tests of liver function?
sentences: MEPE had no effect on glomerular filtration rate or single-nephron filtration rate, but it increased phosphate excretion significantly. In animals infused with vehicle alone (time controls), no significant change was seen in either the proximal tubular fluid:plasma phosphate concentration ratio (TF/P(Pi)) or the fraction of filtered phosphate reaching the late proximal convoluted tubule (FD(Pi)); whereas in rats infused with MEPE, TF/P(Pi) increased from 0.49 ± 0.07 to 0.68 ± 0.04 (n = 22; P = 0.01) and FD(Pi) increased from 0.20 ± 0.03 to 0.33 ± 0.03 (n = 22; P < 0.01)., Hepatocellular carcinoma, which usually develops in cirrhotic livers, is one of the most frequent cancers worldwide. If and how far hepatoma growth influences liver function is unclear. Therefore, we compared a broad panel of quantitative tests of liver function in cirrhotic patients with and without hepatocellular carcinoma., A study was undertaken to measure cough frequency in children with stable asthma using a validated monitoring device, and to assess the correlation between cough frequency and the degree and type of airway inflammation., source_sentence: Does hand-assisted laparoscopic digestive surgery provide safety and tactile sensation for malignancy or obesity?
sentences: In human aortic endothelial cells (HAECs) exposed to high glucose and aortas of diabetic mice, activation of p66(Shc) by protein kinase C βII (PKCβII) persisted after returning to normoglycemia. Persistent p66(Shc) upregulation and mitochondrial translocation were associated with continued reactive oxygen species (ROS) production, reduced nitric oxide bioavailability, and apoptosis. We show that p66(Shc) gene overexpression was epigenetically regulated by promoter CpG hypomethylation and general control nonderepressible 5-induced histone 3 acetylation. Furthermore, p66(Shc)-derived ROS production maintained PKCβII upregulation and PKCβII-dependent inhibitory phosphorylation of endothelial nitric oxide synthase at Thr-495, leading to a detrimental vicious cycle despite restoration of normoglycemia. Moreover, p66(Shc) activation accounted for the persistent elevation of the advanced glycated end product precursor methylglyoxal. In vitro and in vivo gene silencing of p66(Shc), performed at the time of glucose normalization, blunted ROS production, restored endothelium-dependent vasorelaxation, and attenuated apoptosis by limiting cytochrome c release, caspase 3 activity, and cleavage of poly (ADP-ribose) polymerase., Recently, 13 of our patients underwent hand-assisted advanced laparoscopic surgery using this device. In this series, we had two cases of gastrectomy, two cases of gastric bypass for morbid obesity, two Whipple cases for periampullary tumor, and seven cases of bowel resection. On the basis of this series, we were able to assess the utility of this device., Healthy men and women (n = 13; age: 48 +/- 17 y) were studied on 2 occasions: after > or = 48 h with no exercise and 17 h after a 60-min bout of endurance exercise. During each trial, brachial artery flow mediated dilation (FMD) was used to assess endothelial function before and after the ingestion of a candy bar and soft drink. Glucose, insulin, and thiobarbituric acid-reactive substances (TBARS), a marker of oxidative stress, were measured in blood obtained during each FMD measurement. The insulin sensitivity index was calculated from the glucose and insulin data., source_sentence: Do correlations between plasma-neuropeptides and temperament dimensions differ between suicidal patients and healthy controls?
sentences: Decreased plasma levels of plasma-neuropeptide Y (NPY) and plasma-corticotropin releasing hormone (CRH), and increased levels of plasma delta-sleep inducing peptide (DSIP) in suicide attempters with mood disorders have previously been observed. This study was performed in order to further understand the clinical relevance of these findings., Brain death was induced in Wistar rats by intracranial balloon inflation. Pulmonary capillary leak was estimated using radioiodinated albumin. Development of pulmonary edema was assessed by measurement of wet and dry lung weights. Cell surface expression of CD11b/CD18 by neutrophils was determined using flow cytometry. Enzyme-linked immunosorbent assays were used to measure the levels of TNFalpha, IL-1beta, CINC-1, and CINC-3 in serum and bronchoalveolar lavage. Quantitative reverse-transcription polymerase chain reaction was used to determine the expression of cytokine mRNA (IL-1beta, CINC-1 and CINC-3) in lung tissue., Seven hundred fifty patients entered the study. One hundred sixty-eight patients (22.4%) presented with a total of 193 extracutaneous manifestations, as follows: articular (47.2%), neurologic (17.1%), vascular (9.3%), ocular (8.3%), gastrointestinal (6.2%), respiratory (2.6%), cardiac (1%), and renal (1%). Other autoimmune conditions were present in 7.3% of patients. Neurologic involvement consisted of epilepsy, central nervous system vasculitis, peripheral neuropathy, vascular malformations, headache, and neuroimaging abnormalities. Ocular manifestations were episcleritis, uveitis, xerophthalmia, glaucoma, and papilledema. In more than one-fourth of these children, articular, neurologic, and ocular involvements were unrelated to the site of skin lesions. Raynaud's phenomenon was reported in 16 patients. Respiratory involvement consisted essentially of restrictive lung disease. Gastrointestinal involvement was reported in 12 patients and consisted exclusively of gastroesophageal reflux. Thirty patients (4%) had multiple extracutaneous features, but systemic sclerosis (SSc) developed in only 1 patient. In patients with extracutaneous involvement, the prevalence of antinuclear antibodies and rheumatoid factor was significantly higher than that among patients with only skin involvement. However, Scl-70 and anticentromere, markers of SSc, were not significantly increased.
model-index: name: SentenceTransformer based on sentence-transformers/stsb-distilbert-base
results: task: type: information-retrieval
name: Information Retrieval
dataset: name: med eval dev
type: med-eval-dev
metrics: type: cosine_accuracy@1
value: 0.9825
name: Cosine Accuracy@1
verified: no, type: cosine_accuracy@3
value: 0.998
name: Cosine Accuracy@3
verified: no, type: cosine_accuracy@5
value: 0.9985
name: Cosine Accuracy@5
verified: no, type: cosine_accuracy@10
value: 0.9985
name: Cosine Accuracy@10
verified: no, type: cosine_precision@1
value: 0.9825
name: Cosine Precision@1
verified: no, type: cosine_precision@3
value: 0.8438333333333332
name: Cosine Precision@3
verified: no, type: cosine_precision@5
value: 0.5588
name: Cosine Precision@5
verified: no, type: cosine_precision@10
value: 0.29309999999999997
name: Cosine Precision@10
verified: no, type: cosine_recall@1
value: 0.3413382936507936
name: Cosine Recall@1
verified: no, type: cosine_recall@3
value: 0.8453946428571428
name: Cosine Recall@3
verified: no, type: cosine_recall@5
value: 0.9191847222222223
name: Cosine Recall@5
verified: no, type: cosine_recall@10
value: 0.9578416666666667
name: Cosine Recall@10
verified: no, type: cosine_ndcg@10
value: 0.9461928701093355
name: Cosine Ndcg@10
verified: no, type: cosine_mrr@10
value: 0.9899583333333333
name: Cosine Mrr@10
verified: no, type: cosine_map@100
value: 0.9168772609607218
name: Cosine Map@100
verified: no, type: dot_accuracy@1
value: 0.9705
name: Dot Accuracy@1
verified: no, type: dot_accuracy@3
value: 0.9955
name: Dot Accuracy@3
verified: no, type: dot_accuracy@5
value: 0.9985
name: Dot Accuracy@5
verified: no, type: dot_accuracy@10
value: 0.999
name: Dot Accuracy@10
verified: no, type: dot_precision@1
value: 0.9705
name: Dot Precision@1
verified: no, type: dot_precision@3
value: 0.8141666666666666
name: Dot Precision@3
verified: no, type: dot_precision@5
value: 0.546
name: Dot Precision@5
verified: no, type: dot_precision@10
value: 0.28995
name: Dot Precision@10
verified: no, type: dot_recall@1
value: 0.3365662698412698
name: Dot Recall@1
verified: no, type: dot_recall@3
value: 0.8156482142857142
name: Dot Recall@3
verified: no, type: dot_recall@5
value: 0.8994174603174604
name: Dot Recall@5
verified: no, type: dot_recall@10
value: 0.9480904761904763
name: Dot Recall@10
verified: no, type: dot_ndcg@10
value: 0.9297315742366127
name: Dot Ndcg@10
verified: no, type: dot_mrr@10
value: 0.9828083333333333
name: Dot Mrr@10
verified: no, type: dot_map@100
value: 0.8926507948277561
name: Dot Map@100
verified: no
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Created: 2024-10-03 16:24:11