From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Saccharomyces cerevisiae ubiquitin-specific processing protease
Date: 26 Jan 93 05:53:56 GMT
Distribution: bionet
Checksum: 20609 9

LOCUS       YSCUBPIII    4887 bp ds-DNA             PLN       25-JAN-1993
DEFINITION  Saccharomyces cerevisiae ubiquitin-specific processing protease
            (Ubp3) gene, complete cds.
ACCESSION   M94917
KEYWORDS    ubiquitin-specific processing protease.
SOURCE      Saccharomyces cerevisiae (strain GRF88) DNA.
  ORGANISM  Saccharomyces cerevisiae
            Eukaryota; Fungi; Eumycota; Hemiascomycetes; Endomycetales;
            Saccharomycetaceae.
REFERENCE   1  (bases 1 to 4887)
  AUTHORS   Baker,R.T., Tobias,J.W. and Varshavsky,A.
  TITLE     Ubiquitin-specific proteases of Saccharomyces cerevisiae: Cloning
            of UBP2 and UBP3, and functional analysis of the UBP gene family
  JOURNAL   J. Biol. Chem. 267, 23364-23375 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1278..4016
                     /gene="Ubp3"
                     /product="ubiquitin-specific processing protease"
                     /codon_start=1
                     /translation="MNMQDANKEESYSMYPKTSSPPPPTPTNMQIPIYQAPLQMYGYT
                     QAPYLYPTQIPAYSFNMVNQNQPIYHQSGSPHHLPPQNNINGGSTTNNNNINKKKWHS
                     NGITNNNGSSGNQGANSSGSGMSYNKSHTYHHNYSNNHIPMMASPNSGSNAGMKKQTN
                     SSNGNGSSATSPSYSSYNSSSQYDLYKFDVTKLKNLKENSSNLIQLPLFINTTEAEFA
                     AASVQRYELNMKALNLNSESLENSSVEKSSAHHHTKSHSIPKHNEEVKTETHGEEEDA
                     HDKKPHASKDAHELKKKTEVKKEDAKQDRNEKVIQEPQATVLPVVDKKEPEESVEENT
                     SKTSSPSPSPPAAKSWSAIASDAIKSRQASNKTVSGSMVTKTPISGTTAGVSSTNMAA
                     ATIGKSSSPLLSKQPQKKDKKYVPPSTKGIEPLGSIALRMCFDPDFISYVLRNKDVEN
                     KIPVHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLL
                     DACLTMYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFY
                     KTLSTIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQ
                     LKVFFIRNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKT
                     KTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDL
                     ETAFKKFSEYELLPFKSSSGNDVEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMT
                     NYNAYNGRIEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVS
                     SDGGHYTADVYHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQKRN"
BASE COUNT     1704 a   1036 c    955 g   1192 t
ORIGIN      
        1 gcatgctgaa catccttctg caaacaacct tgccacataa cgggtatacc aggcaggcgt
       61 tcatcatcac gccaacatat ttcttgatca acaattgctt cacagatgcg ggattcaagg
      121 ggaaaatgac cgccatcaac gagcagggcc acgactcgat tgatttcgag tcgttgattt
      181 ctgcccttga gcagcacgag gcggagccgc agccccatag taccacagag atgattcagg
      241 ggccaaagtt gaccaagaag gtctacaggt acgttatgta ctgcatcccg acgtttgcaa
      301 acccatcggg aaacacatac tcgcttgaga ccagacgcag acttatcgac atcgctcgga
      361 agtacgacat gctgataatc actgatgacg tgtacgatat tctagattac acgacgccct
      421 cagatgagct gccctctccg cccctaagga tggtgcacat agacagaagt acagcgccct
      481 ccggtgagga ctcgttcggg aatacagtgt ccaacgcaac tttctccaag ctgatcgccc
      541 ctgggctcag atttggatac catgagtcaa tcaacgcgaa tctcgccaga cagctatcta
      601 aaggtggtgc aaacgtctct ggcggaactc cctcacaact gaactccatg atcgtgggtg
      661 agatgctgcg tagtggtgcc gcccagagat gcattgcaca tctgagatcc gtatactccg
      721 agagggccac tgtcttgacc tcggcgctta agaaatacat gccccatgga accgagatta
      781 tgccattgaa gggcggctat tttacttgga tcactctccc accagcgtac aatgccatgg
      841 agatatccac tattcttgcc aagaaattta atgtcatcct tgccgacggc tccaatttcg
      901 aggtcatcgg cgatgagaaa aactggggtc agtcatgctt taggctttct attagtttct
      961 tagaagttga tgatatcgac aggggcattg agctgtttgg agctgtttgc aaatctcatg
     1021 cgatcaccaa taacataact atgtagaagg aatacgtata taggtgaacg gtaataagag
     1081 ggtaattttt ctacgggcaa aggcaaggaa gaaaaagaaa aagaaggaaa aaaatataat
     1141 gtgataaaac aaacaagcag cgaaaaagcg aaagggaaga gaagtgttct agagaagaaa
     1201 gtcattttaa tagtaagtca gactcgtctg ctaccatcat ccaggtaccg ctttcctttc
     1261 catcatcatt aaaaaaaatg aacatgcaag acgctaacaa agaagagtcg tactcgatgt
     1321 acccgaaaac ctcttctcca ccaccaccta cgccaaccaa tatgcagatt cctatttatc
     1381 aagcgccttt gcagatgtac ggctacactc aggccccata tctatacccc acacaaatac
     1441 ctgcctattc gtttaatatg gtcaaccaaa accagccaat ctaccatcaa agtggcagcc
     1501 cacatcactt gcctccgcaa aacaatatta acggcggaag cactaccaat aacaacaaca
     1561 ttaacaagaa gaagtggcac tctaatggca ttaccaataa caatggaagc agcggtaatc
     1621 aaggcgccaa ctctagcggt agcggcatga gctacaacaa atcccacacc taccatcaca
     1681 attactctaa caatcatatc cccatgatgg cctctccaaa cagtggcagc aatgcgggca
     1741 tgaaaaaaca gaccaactct tccaacggca acggttcttc ggctacttca ccatcgtact
     1801 cttcctacaa ctcttcttca cagtatgatt tatacaagtt tgatgtcact aaattaaaga
     1861 atctcaagga aaattcatca aacttgattc aattgccact gttcataaac actacggaag
     1921 cagaatttgc tgcggcaagt gtccaaaggt acgaattaaa catgaaggct ttgaacctaa
     1981 actctgaaag cttagagaac tcatctgtag aaaagagctc tgcccatcat cacacaaaaa
     2041 gccatagtat accaaagcat aatgaggaag taaagacaga aacacatggg gaagaagaag
     2101 atgctcatga taaaaaacca catgcgagca aagatgcgca cgagcttaaa aagaaaactg
     2161 aagtaaagaa agaggatgct aagcaagacc gtaacgaaaa agttatacag gaacctcaag
     2221 ctactgtttt acctgtagtg gataagaagg aaccagagga atctgttgaa gaaaatactt
     2281 ccaagacatc ttcaccttca ccatctcctc cagcagcaaa atcctggtcc gccatagcat
     2341 cagatgcgat taaaagtaga caagctagta acaaaacagt ctccggatcg atggtcacta
     2401 aaacaccaat ttctggtacg accgcaggcg tttcatcaac aaacatggct gcggcgacta
     2461 taggtaaatc cagctctccc ctgttgtcca agcagcctca gaaaaaggat aaaaaatacg
     2521 ttccaccttc tacaaagggt attgagccac tgggttcgat tgcgttaaga atgtgttttg
     2581 atcccgattt cattagttac gttttacgga ataaagatgt tgaaaacaaa ataccagtcc
     2641 attccattat tccaagaggc ataattaaca gagccaacat ttgttttatg agttctgtgt
     2701 tacaagtgtt actctactgt aagccattta ttgatgtaat taacgttctc agtacacgga
     2761 ataccaattc aagagtcggc acatcatcct gtaaattatt agatgcttgt ttgactatgt
     2821 ataagcaatt cgataaggaa acctatgaga aaaaattcct agagaatgct gatgatgctg
     2881 aaaaaaccac ggaaagtgat gcaaaaaaat catcaaaatc caagagtttc caacactgcg
     2941 ccactgccga tgctgtcaaa cctgacgaat tttacaaaac tttgtctact ataccgaagt
     3001 tcaaagactt gcaatggggc catcaggaag acgcagaaga atttttgacc cacttattgg
     3061 accaattaca cgaggaatta atttctgcaa ttgatggctt aaccgataat gaaattcaaa
     3121 atatgctgca aagtattaat gatgaacaat tgaaagtttt ctttattaga aatttgtcac
     3181 gttatggaaa agcagagttt atcaaaaatg ctagtcctag actgaaggag ttgatagaaa
     3241 aatatggcgt gatcaatgat gactctaccg aagaaaatgg ttggcatgaa gtgagcggat
     3301 ctagcaaaag aggcaagaaa actaagaccg ctgccaagag gactgtcgag attgttccat
     3361 caccaatctc caaacttttc ggtggccagt tcagatctgt gttagatata ccgaacaata
     3421 aggaatctca atcgattaca ctcgatccgt tccaaacaat tcaattggac atttcagatg
     3481 ctggtgtgaa tgatctagaa actgcattca aaaaatttag tgaatacgaa ttgctaccct
     3541 ttaagtcctc gtcagggaat gatgtcgagg ccaagaagca gacttttatt gataaattgc
     3601 cgcaagttct tttaatccaa ttcaaaagat tctcattcat aaataatgtg aacaaagaca
     3661 acgcaatgac gaactataac gcgtacaatg gacgtattga gaagatcagg aaaaaaatta
     3721 aatatggtca cgagttaatc atacctgaag aatcaatgtc ttccataaca ttgaaaaaca
     3781 acacctcagg gattgatgat agaagatata agctaaccgg agttatatac catcatgggg
     3841 taagttccga tggcggtcat tacacagcgg atgtttatca tagcgagcac aacaaatggt
     3901 atagaataga tgatgtaaat attaccgaac tagaggacga tgacgttttg aaaggtggcg
     3961 aagaagcttc tgattcgagg actgcctata ttttaatgta tcaaaagaga aattaagacg
     4021 gggggtggta ttatagacaa aatacataaa aaataatata gcaataatac aatacaatac
     4081 aatacaatac gatagtgagc acgattttaa aaaagaaata gagacagaca gagaaacaga
     4141 gttacacttt atgcttggca tatttaaaaa atgatttcgc ccaggatcga actggggacg
     4201 ttctgcgtgt taagcagatg ccataaccga ctagaccacg aaaccaatta tttcttggag
     4261 atgaacattt aagaaacaaa taccttgtag aaggaatgtg aatttcaaaa tattatggcc
     4321 tttggcaaca atggaatcac aacaattatc acaaaactca tacatctctt aagattcatt
     4381 tcttacttta agtaatcatc caaatttagc caaagtttga ttttacctaa aaaaagcaga
     4441 ggattcccga tttcaatcat atgtgcacag acgatgagtc caacacgtta tcgttaacat
     4501 agtgctcaat attgccactg cgcttcgcag gagcatattt cgtatacgcc aagcccaagg
     4561 agggttttgt cattaagcag cttacgccaa ttaagtgcta acctcgaagc accatacttt
     4621 atctcaggat ttacaaactc cctattgcac aacggcaaac aacataatca tgaccaaatg
     4681 ggtaaaaaag atgagctgtg aaaaagccaa aaaaaaaaag gaagaactag aattacattt
     4741 attattctac acacaaaaag aaaaaatagt ttctttattt aaatgatttg aagaaaaaga
     4801 actataacga ctacatcgaa gaatacaata ttagtaaaaa acacatgtcc tgtttaaaat
     4861 aagtctctag ttaaagacta ttcgatc
//