HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.sativa random single-copy DNA fragment 09RG136R
Date: 10 Apr 92 10:11:59 GMT
Distribution: bionet
Checksum: 40726     2

LOCUS       RIC09RG13R    259 bp ds-DNA             PLN       10-APR-1992
DEFINITION  O.sativa random single-copy DNA fragment 09RG136R
ACCESSION   X57907
KEYWORDS    PCR amplified.
SOURCE      Oryza sativa DNA.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 259)
  AUTHORS   Williams,M.N., Pande,N., Nair,S., Mohan,M. and Bennett,J.E.
  TITLE     Restriction fragment length polymorphism analysis of polymerase
            chain reaction amplified from mapped loci of rice (oryza
            sativa)genomic DNA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=IR 36; *source: sub_strain=indica;
            Entry x57860-x57923 consist of random single-copy DNA fragments,
            which were isolated and mapped to the twelve haploid chromosomes of
            the rice. Apart from their map location, copy number and DNA
            sequence, very little is known about these loci. Names are encoded
            as follows: 01 RG140 F (chromosome, clone, 'F'orward or 'R'everse
            primer)
            By mistake entry x57866-x57899 are mentioned in Gene 107, 229-240.
            From EMBL    entry OS09RG13R;  dated 25-MAR-1992.
BASE COUNT       80 a     48 c     50 g     81 t
ORIGIN
        1 aagcttgggc tgcagtactc cagtttgact tcagattgta atgtactcca actaatccat
       61 gttatagaaa gggttaaatt taaccaaaca cattgatatt ttgtagattt cagataagta
      121 cattttcctg aaaatgatta atgttcaggc cagcccccat tttggtcaag cgtcagaata
      181 atacagtcgc tgccgatgat taattgatag ggatctctaa ccactgtcga taattgcatg
      241 cgtgtaacta tgcagagta
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human glutathione S-transferase pi (GST-pi) gene, exon 6.
Date: 7 Apr 92 10:05:35 GMT
Distribution: bionet
Checksum: 55591     3

LOCUS       HUMGSTPI02    591 bp ds-DNA             PRI       07-APR-1992
DEFINITION  Human glutathione S-transferase pi (GST-pi) gene, exon 6.
ACCESSION   X08095 M33083
KEYWORDS    glutathione S-transferase pi.
SEGMENT     2 of 3
SOURCE      Human, cell line HPB-ALL, lymphoid DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Cowell,I.G.
  JOURNAL   Unpublished (1988) see COMMENT for author address
  STANDARD  simple automatic
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Cowell,I.G., Dixon,K.H., Pemble,S.E., Ketterer,B. and Taylor,J.B.
  TITLE     The structure of the human glutathione S-transferase pi gene
  JOURNAL   Biochem. J. 255, 79-83 (1988)
  STANDARD  simple staff_entry
COMMENT     See X08094 - X08096 for GST pi gene sequence; see X06547 for GST
            mRNA sequence.
               EMBL features not translated to GenBank features:
               key        from     to       description
               TRANSCR      <1   >591       primary transcript
               MSG         470    577       Exon 6
            [1]  Author address Cowell I.G., University College and Middlesex,
            School of Medicine, Windeyer Building, Cleveland Street, London,
            W1P 6DB, United Kingdom.
            Submitted (13-JUL-1988) on tape to the EMBL data library by:
FEATURES             Location/Qualifiers
     intron          order(X08094:1592..1724,1..469)
                     /number=5
                     /gene="GST3"
     exon            470..577
                     /number=6
                     /gene="GST3"
BASE COUNT      131 a    111 c    225 g    124 t
ORIGIN      About 300 bp after segment 1.
        1 tgggaccagt cagcagaggc agcgtgtgtg cgcgtgcgtg tgcgtgtgtg tgcgtgtgtg
       61 tgtgtacgct tgcatttgtg tcgggtgggt aaggagatag agatgggcgg gcagtaggcc
      121 caggtcccga aggccttgaa cccactggtt tggagtctcc taagggcaat gggggccatt
      181 gagaagtctg aacagggctg tgtctgaatg tgaggtctag aaggatcctc cagagaagcc
      241 agctctaaag cttttgcaat catctggtga gagaacccag caaggatgga caggcagaat
      301 ggaatagaga tgagttggca gctgaagtgg acaggatttg gtactagcct ggttgtgggg
      361 agcaagcaga ggagaatctg ggactctggt ggtctggcct ggggcagacg ggggtgtctc
      421 aggggctggg agggatgaga gtaggatgat acatggtggt gtctggcagg aggcgggcaa
      481 ggatgactat gtgaaggcac tgcccgggca actgaagcct tttgagaccc tgctgtccca
      541 gaaccaggga ggcaagacct tcattgtggg agaccaggtg agcatctggc c
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Paragyrodon sphaerosporus 18S ribosomal RNA gene, partial.
Date: 10 Apr 92 10:11:07 GMT
Distribution: bionet
Checksum: 25495     2

LOCUS       PRG18SRRN     569 bp ds-DNA             PLN       10-APR-1992
DEFINITION  Paragyrodon sphaerosporus 18S ribosomal RNA gene, partial.
ACCESSION   M90826
KEYWORDS    18S ribosomal RNA.
SOURCE      Paragyrodon sphaerosporus (library: TDB-420) basidiocarp DNA.
  ORGANISM  Paragyrodon sphaerosporus
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Hymenomycetes;
            Agaricales; Boletaceae.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Bruns,T.D. and Szaro,T.M.
  TITLE     Rate and mode differences between nuclear and mitochondrial small
            subunit rRNA genes in mushrooms
  JOURNAL   Mol. Biol. Evol. (1992) In press
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     rRNA            <1..569
                     /note="central portion of 18s ribosomal RNA gene,
                     sequenced between Ns3 and Ns4 primers, as defined by White
                     et al. (1990) in PCR protocols"
                     /note="sequence starts 36 bases 5' from the start of the
                     Ns3 primer"
                     /product="18S ribosomal RNA"
                     /gene="18S rRNA"
                     /citation=[1]
BASE COUNT      147 a    101 c    164 g    157 t
ORIGIN
        1 tccaatagcg tatattaaag ttgttgcagt taaaaagctc gtagttgaac tttgggcctg
       61 gacgggcggt ccgccgaaag gcgtcgtact gtctggctgg gcctttcctc ttggtgaatc
      121 ggggtgccct ttgttgggtg cgtcggggaa ccaggacttt taccttgaga aaattagagt
      181 gttcaaagca ggcgtttcgc ccgaatacat tagcatggaa taatgaaata ggacgtgcgg
      241 ttctatttcg ttggtttcta gagtcgccgt aatgattaat agggacagtt gggggcatta
      301 gtattcagtc gctagaggtg aaattcttgg attgactgaa gactaactac tgcgaaagca
      361 tttgccaagg atgttttcat taatcaagaa cgaaggttag gggatcgaaa acgatcagat
      421 accgttgtag tcttaacagt aaactatgcc gactagggat cgggcgacct cttattgatg
      481 tgtcgctcgg caccttacga gaaatcaaag tctttgggtt ctggggggag tatggtcgca
      541 aggctgaaac ttaaaggaat tgacggaag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Gymnodinium galatheanum 18S ribosomal RNA
Date: 9 Apr 92 10:03:03 GMT
Distribution: bionet
Checksum: 37290     2

LOCUS       GYN18SRRN     475 bp ss-rRNA            RNA       09-APR-1992
DEFINITION  Gymnodinium galatheanum 18S ribosomal RNA
ACCESSION   M88511
KEYWORDS    18S ribosomal RNA.
SOURCE      Gymnodinium galatheanum rRNA.
  ORGANISM  Gymnodinium galatheanum
            Eukaryota; Chromophycota; Dinophyceae; Dinophycidae; Gymnodiniales;
            Gymnodiniaceae.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Rowan,R. and Powers,D.A.
  TITLE     Ribosomal RNA sequences and the diversity of symbiotic
            dinoflagelaates (zooxanthellae)
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 3639-3643 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     rRNA            1..475
                     /product="18S ribosomal RNA"
                     /gene="18S rRNA"
                     /citation=[1]
                     /partial
BASE COUNT      113 a    103 c    122 g    137 t
ORIGIN
        1 tctagagcta atacatgcgc ccaaacccga cttcgtggaa gggttgtgtt tattagatac
       61 agaaccaacc caggttcgcc ctggtattgt ggtgattcat agtaaccgaa cgaatcgcat
      121 agcttccgct ggcgataaat cattcaagtt tctgacctat cagcttccga cggtagggta
      181 ttggcctacc gtggcaatga cgggtaattc cagctccaat agcgtatatt aaagttgttg
      241 cggttaaaaa gctcgtagtt ggatttctgc cgaggacgac cggtccgccc tctgggtgcg
      301 tatctggctc ggcctgggca tcttcttgga gaacgtatct gcacttgact gtgtggtgcg
      361 gtatccagga cttttacttt gaggaaatta gagtgtttca agcaggcaca cgccttgaat
      421 acattagcat ggaataataa gataggacct cggttctatt ttgttggttt ctaga
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.sativa random single-copy DNA fragment 09RG386F
Date: 10 Apr 92 10:12:01 GMT
Distribution: bionet
Checksum: 11262     2

LOCUS       RIC09RG38F     70 bp ds-DNA             PLN       10-APR-1992
DEFINITION  O.sativa random single-copy DNA fragment 09RG386F
ACCESSION   X57908
KEYWORDS    PCR amplified.
SOURCE      Oryza sativa DNA.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 70)
  AUTHORS   Williams,M.N., Pande,N., Nair,S., Mohan,M. and Bennett,J.E.
  TITLE     Restriction fragment length polymorphism analysis of polymerase
            chain reaction amplified from mapped loci of rice (oryza
            sativa)genomic DNA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=IR 36; *source: sub_strain=indica;
            Entry x57860-x57923 consist of random single-copy DNA fragments,
            which were isolated and mapped to the twelve haploid chromosomes of
            the rice. Apart from their map location, copy number and DNA
            sequence, very little is known about these loci. Names are encoded
            as follows: 01 RG140 F (chromosome, clone, 'F'orward or 'R'everse
            primer)
            By mistake entry x57866-x57899 are mentioned in Gene 107, 229-240.
            From EMBL    entry OS09RG38F;  dated 25-MAR-1992.
BASE COUNT       22 a     14 c     20 g     14 t
ORIGIN
        1 ctgcagcaga gtactgtgca actgacctgt tcagatcaag ttcgaaagct gtaaaggctg
       61 cagagaagag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mus musculus T cell receptor (TCR) beta-chain mRNA, V3-D2-J2-6
Date: 7 Apr 92 10:06:21 GMT
Distribution: bionet
Checksum: 11971     2

LOCUS       MUSTCRBETB    338 bp ss-mRNA            ROD       07-APR-1992
DEFINITION  Mus musculus T cell receptor (TCR) beta-chain mRNA, V3-D2-J2-6
            region, partial cds.
ACCESSION   M87849
KEYWORDS    D-region; J-region; T-cell receptor beta-chain; V-region;
            transmembrane protein.
SOURCE      Mus musculus (strain B6-C-H2bm12) (library: lambda gt10) cDNA to
            mRNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Kobori,J.A., Hood,L. and Shastri,N.
  TITLE     Structure-function relationship among T-cell receptors specific for
            lysozyme peptides bound to A-b or A-bm-12 molecules
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 2940-2944 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     CDS             <1..>338
                     /product="T cell receptor beta-chain"
                     /gene="TCR beta-chain"
                     /codon_start=2
                     /translation="NSKVIQTPRYLVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFK
                     FLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSRDFYEQY
                     FGPGTRLTVL"
BASE COUNT      109 a     71 c     72 g     86 t
ORIGIN      Chromosome 6
        1 gaattcaaaa gtcattcaga ctccaagata tctggtgaaa gggcaaggac aaaaagcaaa
       61 gatgaggtgt atccctgaaa agggacatcc agttgtattc tggtatcaac aaaataagaa
      121 caatgagttt aaatttttga ttaactttca gaatcaagaa gttcttcagc aaatagacat
      181 gactgaaaaa cgattctctg ctgagtgtcc ttcaaactca ccttgcagcc tagaaattca
      241 gtcctctgag gcaggagact cagcactgta cctctgtgcc agcagtcggg acttttatga
      301 acagtacttc ggtcccggca ccaggctcac ggttttag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPF8, V3 region.
Date: 7 Apr 92 10:03:32 GMT
Distribution: bionet
Checksum: 65032     3

LOCUS       HIVFLPF8      306 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPF8, V3 region.
ACCESSION   M90900
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone A08 of DNA
            ID 6398.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from patient "F" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>306
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="EEVVIRSENFTDNVKTIIEQLNESVQINCTRPNNNTRKSIHIAP
                     GRAFYATGEIIRDIRQAHRNLSSIKWNNTLRQIAKKLKEQFGNKTIIFNQSSGGDPEI
                     "
BASE COUNT      142 a     45 c     52 g     67 t
ORIGIN      near the C2-V3 boundary
        1 gaagaagtag taattagatc tgaaaatttc acggacaatg ttaaaaccat aatagagcag
       61 ctgaatgaat ctgtacaaat taattgtaca agacccaaca acaatacaag aaaaagtata
      121 catatagcac cggggagagc attttatgca acaggagaaa taataagaga tataagacaa
      181 gcacatcgta accttagtag cataaaatgg aataacactt taagacagat agctaaaaaa
      241 ttaaaagaac aatttggaaa taaaacaata atctttaatc aatcctcagg aggggaccca
      301 gaaatt
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Spirochaeta stenostrepta gene sequence.
Date: 10 Apr 92 10:13:12 GMT
Distribution: bionet
Checksum: 07417     3

LOCUS       SPASEQD      1567 bp ds-DNA             BCT       10-APR-1992
DEFINITION  Spirochaeta stenostrepta gene sequence.
ACCESSION   M88724 M34264
KEYWORDS    .
SOURCE      Spirochaeta stenostrepta DNA.
  ORGANISM  Spirochaeta stenostrepta
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes;
            Spirochaetales; Spirochaetaceae.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Paster,B.J., Dewhirst,F.E., Weisburg,W.G., Tordoff,L.A.,
            Fraser,G.J., Hespell,R.B., Stanton,T.B., Zablen,L.B., Mandelco,L.
            and Woese,C.R.
  TITLE     Phylogenetic analysis of the spirochetes
  JOURNAL   J. Bacteriol. 173, 6101-6109 (1991)
  STANDARD  simple staff_entry
BASE COUNT      387 a    343 c    493 g    297 t     47 others
ORIGIN
        1 nctttggtct tcggnccgta agaaatatat catggnnagt ttgatcctgg ctcagaacga
       61 acgctggcgg cgcgtcttaa gnatgcaagt cgagcggcaa gggtagcaat acccctagag
      121 cggcggactg gtgagtaaca cgtgggtgat ctacctttag gttggggata gccattagaa
      181 atagtgggta ataccgaatg tggttgcggg gctttggcct tgtaaagaaa ggagctagct
      241 ccgcctgaag atgagcccnc gtcccattag ctagttgggg gtgtaacgga ccaccaaggc
      301 gatgatgggn agccggcctg agagggtgaa cggccacact gggactgaga tacggcccag
      361 actcctacgg gaggcagcag ctaagaatat tccgcaatgg acgaaagtct gacggagcga
      421 cgccgcgtgg atgatgaagg ccgaaaggtt gtaaagtcct tttgtcgacg aagaataagt
      481 gggggaggga atgccctcat gatgacgtta gtcggcgaat aagccccggc taattacgtg
      541 ccagcagccg cggtaacacg taaggggcna gcgttgttcg gaattattgg gcgtaaaggg
      601 tacgtaggcg gtcctgtaag cccnacgtga aatactggag cttaactcca gaactgcgcc
      661 gggaactgta ggacttgagt catggaaggg gagttggaat tccaggtgta ggggtgaaat
      721 ctgtagatat ctggaagaac accggtggcg aaggcgaact cctggccaat gactgacgct
      781 gaggtacgaa agtgcgggga gcaaacagga ttagataccc tggtagtccg cacagtaaac
      841 gatgtgcact aggtgttggg ccgagcggtt cagtgccgaa gctaacgtga taagtgcacc
      901 gcctggggag tatgcccgca agggtgaaac tcaaaggaat tgacgggggc cngcacaagc
      961 ggtggagcat gtggtttaat tcgnnnntac gcgaggaacc ttacctgggt ttgacatcct
     1021 gaggaatacg gtagagatat cgtagcgtag caatacgtcg caggacaggt gctgcatggc
     1081 tgtcgtcagc tcgtgccgtg aggtgttggg ttaagtcccg caacgagcgc aacccctact
     1141 gccagttact aacaggtgaa gctgaggact ctggcngaac tgccggtgac aaaccggagg
     1201 aaggtgggga tgacgtcaag tcatcatggc ccttatgtcc agggctacac acgtgctaca
     1261 atggtcggta cagagcgcag cgaacccgcg agggataagc gaaccgcaaa aagccggccg
     1321 tagttcggat tgaagtctga aacccgactt catgaaggtg gaatcgctag taatcgcgca
     1381 tcagcacggc gcggtgaata cgttcccggg ccttgtacac accgcccgtc acaccatccg
     1441 agttggaggt acccgaagcc gttagcttaa cccgcaaggg ggagcgacgt cgaaggtatg
     1501 gctagttann anngnnnnnn ngtaacaagn nnnnnnnnnn ngaaagnnnn nnnngatcac
     1561 ctccttn
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLD4, V3 region.
Date: 7 Apr 92 10:01:57 GMT
Distribution: bionet
Checksum: 17901     3

LOCUS       HIVFLD4       360 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLD4, V3 region.
ACCESSION   M90850
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone 4 of DNA ID
            4430.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>360
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEVVIRSANFTDNAKIIIVQLNASVEINCTRPNNNTRKGIH
                     IGPGRAFYATGEIIGDIRQAHCNISREKWNNTLRQVVTKLREQFGNKTVIFNHSSGGD
                     PEIVMHSFNCGGEFFYCN"
BASE COUNT      149 a     50 c     73 g     88 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaggtagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacagc tgaatgcatc tgtagaaatt aattgtacaa gacccaacaa caacacaaga
      121 aaaggtatac atataggacc agggagggca ttttatgcaa caggagaaat aataggagat
      181 ataagacaag cacattgtaa cattagtaga gaaaaatgga ataatacttt aagacaggta
      241 gttacaaaat taagagaaca atttgggaat aaaacagtaa tctttaatca ctcctcagga
      301 ggggacccag aaattgtaat gcacagtttt aattgtggag gggaattttt ctactgtaat
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPC12, V3
Date: 7 Apr 92 10:02:46 GMT
Distribution: bionet
Checksum: 52543     3

LOCUS       HIVFLPC12     316 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPC12, V3
            region.
ACCESSION   M90877
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone DA12 of DNA
            ID 5592.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 316)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 5 clones over the V3 region
            obtained by the CDC from patient "C" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>316
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEVVIRSANFTDNAKIIIVQLNASVEINCTRPNNNTRKGIH
                     IGPGRAVYATDRIIGDIRQAHCNISREKWNNTLKQVVTKLREQFVNKPIIFTHPSGGD
                     PEI"
BASE COUNT      138 a     49 c     58 g     71 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaggtagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacagc tgaatgcatc tgtagaaatt aattgtacaa gacccaacaa caatacaaga
      121 aaaggtatac atataggacc agggagagca gtttatgcaa cagacagaat aataggagat
      181 ataagacaag cacattgtaa cattagtaga gaaaaatgga ataatacttt aaaacaggta
      241 gttacaaaat taagagaaca atttgtgaat aaaccaataa tctttactca cccctcagga
      301 ggggacccag aaattt
//