From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: dnaN=DnaA...gyrB=gyrase beta-subunit [Buchnera aphidicola, aphid
Date: 3 Jan 93 22:22:00 GMT
Distribution: bionet
Checksum: 17681 8

LOCUS       S98412       3312 bp    DNA             UNA       24-NOV-1992
DEFINITION  dnaN=DnaA...gyrB=gyrase beta-subunit [Buchnera aphidicola, aphid
            endosymbiont, Genomic, 3 genes, 3312 nt]
ACCESSION   S98412
KEYWORDS    .
SOURCE      Buchnera aphidicola aphid endosymbiont
  ORGANISM  Buchnera aphidicola
            Unclassified.
REFERENCE   1  (bases 1 to 3312)
  AUTHORS   Lai,C.Y. and Baumann,P.
  TITLE     Genetic analysis of an aphid endosymbiont DNA fragment homologous
            to the rnpA-rpmH-dnaA-dnaN-gyrB region of eubacteria.
  JOURNAL   Gene 113, 175-181 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 98412] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2B.  The authors begin their
            numbering at -60.  Zero is not present in the numbering.
FEATURES             Location/Qualifiers
     CDS             431..1795
                     /note="GTG start codon.  chromosome replication initiation
                     protein;  For the protein sequence (NCBI gibbsq 98413):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 2B.
                     Author-given protein sequence differs from the conceptual
                     translation for reasons explained in citation"
                     /gene="dnaN"
                     /product="DnaA"
                     /codon_start=1
                     /translation="MSLCLWKQCLDRLQSELPSTEFSMWIRSLKAKLNNNILEIYAPN
                     QFILDWVKDKYLIHFKKILQDFCGSNSPFIKFKVYQTSKEKKFKKNILQKIQNLNAKP
                     IWDKIPIFKKSSHRSNINKKHSFENFIEGKSNQLARAAASQVAKNPGNSYNPLFLYGG
                     TGLGKTHLLHAIGNGILAYKYNVKIIYMHSERFVQDMVKALQNNAIEKFKLYYRSVDA
                     LLIDDIQFFAHKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWG
                     LTVAIDPPELETRVAILIKKADENNIVLSDEVAFFIAKHLRSNVRELEGALNRVIVNA
                     NFTHRSITVEFVREALRDILALQEKLVTIANIQKTVAEYYKIKVADLLSRRRSRSVAR
                     PRQMAMAMAKELTNHSLPEIGDAFSGRDHTTVLHACRKIEQLRKENHDIKEDFSNLIR
                     TLSV"
     CDS             1800..2900
                     /note="DnaN;  For the protein sequence (NCBI gibbsq
                     98414):  Method: conceptual translation supplied by
                     author.  This sequence comes from Fig. 2B."
                     /gene="dnaN"
                     /product="DNA polymerase III beta-subunit"
                     /codon_start=1
                     /translation="MKFTIQNDILTKNLKKITRVLVKNISFPILENILIQVEDGTLSL
                     TTTNLEIELISKIEIITKYIPGKTTISGRKILNICRTLSEKSKIKMQLKNKKMYISSE
                     NSNYILSTLSADTFPNHQNFDYISKFDISSNILKEMIEKTEFSMGKQDVRYYLNGMLL
                     EKKDKFLRSVATDGYRLAISYTQLKKDINFFSIIIPNKAVMELLKLLNTQPQLLNILI
                     GSNSIRIYTKNLIFTTQLIEGEYPDYKSVLFKEKKNPIITNSILLKKSLLRVAILAHE
                     KFCGIEIKIENGKFKVLSDNQEEETAEDLFEIDYFGEKIEISINVYYLLDVINNIKSE
                     NIALFLNKSKSSIQIEAENNSSNAYVVMLLKR"
     CDS             3055..3300
                     /note="GyrB;  For the protein sequence (NCBI gibbsq
                     98415):  Method: conceptual translation supplied by
                     author.  This sequence comes from Fig. 2B."
                     /gene="gyrB"
                     /product="gyrase beta-subunit"
                     /codon_start=1
                     /translation="MIDTYDSSKIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEIV
                     DNSIDEALAGFCKEIKVVIHSDNSVSIKDDGRGIPTDI"
BASE COUNT     1378 a    393 c    425 g   1116 t
ORIGIN      
        1 agttcgtttc attttaatat ttacctcaat atactttatt aaatataatt aataagattc
       61 tctaaaccaa gaagagaaga atgttttttt aaatgataaa aataaattta ctttatttgt
      121 taaattaata attcatcatt ttaaaaaaat gaaaaaatac tatttaaaaa aaatttttga
      181 tattttattt tgatataaaa aatgtatttt tttataaaaa aactaaattt aaaaaaatca
      241 cttctttaga taaaaaatat ctaaaaatac attatatcct tttcgttata ctcaccaatc
      301 ttaaattgta taacttttaa tgtaaaaaaa tataattttt ttttatatta aacatatgtg
      361 tcaaaataga aaaacaaaaa aaacagccat tttttaaatt tcattgaatt ttgttcgctt
      421 ggagtctagc gtgtcacttt gtctttggaa acagtgtctt gaccggttgc agagcgagct
      481 gccatctaca gaatttagta tgtggatacg ctctctaaaa gccaaattaa acaataatat
      541 tttagaaata tatgctccaa atcaatttat tttagattgg gtaaaagata aatatttaat
      601 tcattttaaa aaaatactac aagatttttg tggttctaat tcaccattca taaaatttaa
      661 agtataccaa acttctaaag aaaaaaaatt taaaaaaaac attttacaaa aaatacaaaa
      721 tttaaatgca aaaccaattt gggataagat accaattttt aaaaaatcgt ctcatcgttc
      781 taatattaac aaaaaacata gttttgaaaa ttttatagaa ggaaaatcaa atcaattagc
      841 acgagcagct gcatctcaag tagctaaaaa ccctggaaac tcttataatc cacttttttt
      901 atatggaggt acaggattag gaaaaacaca tttattacat gctataggga acggaatatt
      961 agcatataaa tataatgtta aaattatcta tatgcattct gaacgttttg tgcaagatat
     1021 ggtcaaggct ttacaaaata atgcaattga aaaatttaaa ttatactatc gttctgttga
     1081 cgcattgtta attgacgata ttcaattttt tgcacataaa gaacgttctc aagaagaatt
     1141 ttttcataca tttaatgctc ttttagaagg gaatcaacaa atcattttaa cttcagatcg
     1201 atatcctaaa gaaattaatg gagttgaaga tcgtttaaaa tcgagatttg gttggggtct
     1261 gacagttgct attgatccac cagaattaga aacaagagtc gccatattga ttaaaaaagc
     1321 agatgaaaat aatattgtat tatctgacga agttgcattc tttatagcca aacatttacg
     1381 ttctaatgtt cgcgaattag aaggagctct aaacagagta attgttaatg ctaattttac
     1441 acaccgttct attactgtag aattcgttcg tgaagcgctt cgagatatat tagctttgca
     1501 ggaaaaacta gttaccattg ctaatattca aaaaacagtt gcagaatatt ataaaataaa
     1561 agtagcagat ttattatcta gacgacgttc tcgttcagta gctcgtccca gacaaatggc
     1621 gatggctatg gcaaaagaat taactaatca tagcttgcca gaaattggag atgcttttag
     1681 cggaagagat cataccacag tacttcatgc ttgtcgtaaa attgaacaat tacgtaaaga
     1741 aaatcacgat attaaagaag atttttcaaa tttaatcaga actctatcag tgtgatatta
     1801 tgaaatttac tattcaaaac gatattttaa ctaaaaattt aaaaaaaata actcgagtac
     1861 tagtcaaaaa tatttcattt cctattttag aaaatatatt aattcaagtt gaagatggaa
     1921 ctttgtcttt aacaacaaca aatttagaaa tagagcttat ttcaaaaatt gaaattataa
     1981 caaaatatat accaggaaaa acaactattt caggtagaaa aattttaaat atttgtcgaa
     2041 ctttatcaga aaaatcaaaa ataaaaatgc aactaaaaaa taaaaaaatg tatatttctt
     2101 ctgaaaatag caattatata ttaagtactt tatctgctga tacttttcca aatcatcaaa
     2161 attttgatta tatttccaaa tttgatatat cctcaaatat attaaaagaa atgatagaaa
     2221 aaactgaatt ttcaatggga aaacaagatg taagatatta cttaaatggt atgttattag
     2281 aaaaaaaaga taaattttta cgtagtgttg caacagatgg atatagatta gcaatatcgt
     2341 atactcaatt aaagaaagat atcaattttt tttcaattat tattcctaat aaagcagtaa
     2401 tggaattgtt aaaattatta aatactcaac cacaattatt aaatatttta attggttcca
     2461 atagtattag aatatataca aaaaatttaa tttttactac tcaattaatt gaaggtgaat
     2521 atcctgatta taagagtgtt ttatttaaag aaaaaaagaa tccaattatt actaattcta
     2581 ttttattaaa aaaatcacta ttacgcgttg ctattctagc tcatgaaaag ttctgtggaa
     2641 ttgaaataaa aattgaaaac ggtaagttta aagtactatc tgataatcaa gaagaagaaa
     2701 ctgctgaaga tctattcgaa attgattatt tcggagaaaa aatagaaatc tcaataaatg
     2761 tttattatct attagatgtt atcaacaata taaaaagtga aaatattgct ttatttttaa
     2821 ataaatctaa atcttctata caaatcgaag cagaaaacaa ttcttcaaac gcatatgttg
     2881 taatgctatt gaaaagataa aaataagtaa tttatatata tatcaaagaa atttaagaac
     2941 ataaatttta acatattcaa aatataaaaa ataattaaaa ttttaaaaat agaaaatata
     3001 taataatcgt attataaaaa acacattatc aattaaaaaa taacaaggaa aaatatgata
     3061 gatacttatg attcttctaa aataaaaata ttaagaggat tagatgccgt tcgtaaaaga
     3121 ccaggaatgt atattggaga tactgatgat ggaagtggac tacatcatat ggttttcgaa
     3181 attgttgata attctattga cgaagcatta gcagggtttt gtaaagaaat caaagtagtt
     3241 attcattctg ataattcagt atcaattaaa gacgatggaa ggggtattcc aactgatata
     3301 catcctgaag aa
//