From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mytilus edulis mitochondrial NADH dehydrogenase subunit 5 (ND5)
Date: 29 Dec 92 20:57:43 GMT
Distribution: bionet
Checksum: 35331 13

LOCUS       MSLMTFR1A    5297 bp ds-DNA             ORG       11-DEC-1992
DEFINITION  Mytilus edulis mitochondrial NADH dehydrogenase subunit 5 (ND5)
            gene, 3' end; NADH dehydrogenase subunit 6 (ND6) gene, complete
            cds; and cytochrome b (cyt b), 5' end.
ACCESSION   M83756
KEYWORDS    NADH dehydrogenase subunit 5; NADH dehydrogenase subunit 6;
            cytochrome b; large subunit ribosomal RNA;
            small subunit ribosomal RNA; transfer RNA-Asn; transfer RNA-Asp;
            transfer RNA-Cys; transfer RNA-Gln; transfer RNA-Glu;
            transfer RNA-Gly; transfer RNA-Ile; transfer RNA-Phe;
            transfer RNA-Tyr.
SOURCE      Mitochondrion Mytilus edulis (chromosome Mitochondrion Mytilus
            edulis) adult DNA.
  ORGANISM  Mitochondrion Mytilus edulis
            Eukaryota; Animalia; Eumetazoa; Mollusca; Bivalvia;
            Isofilibranchia; Mytiloida; Mytilacea; Mytilidae.
REFERENCE   1  (bases 1 to 5297)
  AUTHORS   Hoffmann,R.J., Boore,J.L. and Brown,W.M.
  TITLE     A novel mitochondrial genome organization for the blue mussel,
            Mytilus edulis
  JOURNAL   Genetics 131, 397-412 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     tRNA            725..792
                     /anticodon=(pos:755..757,aa:Phe)
                     /product="transfer RNA-Phe"
                     /gene="tRNA-Phe"
                     /citation=[1]
                     /note="putative"
     rRNA            793..1737
                     /product="small subunit ribosomal RNA"
                     /citation=[1]
                     /note="single stranded sequencing nucleotides 997-1539;
                     location of 5' and 3' ends imprecisely known.; putative"
     tRNA            1738..1803
                     /anticodon=(pos:1769..1771,aa:Gly)
                     /product="transfer RNA-Gly"
                     /gene="tRNA-Gly"
                     /citation=[1]
                     /note="putative"
     tRNA            1804..1868
                     /anticodon=(pos:1835..1837,aa:Asn)
                     /product="transfer RNA-Asn"
                     /gene="tRNA-Asn"
                     /citation=[1]
                     /note="putative"
     tRNA            1869..1933
                     /anticodon=(pos:1899..1901,aa:Glu)
                     /product="transfer RNA-Glu"
                     /gene="tRNA-Glu"
                     /citation=[1]
                     /note="putative"
     tRNA            1935..2002
                     /anticodon=(pos:1969..1971,aa:Cys)
                     /product="transfer RNA-Cys"
                     /gene="tRNA-Cys"
                     /citation=[1]
                     /note="putative"
     tRNA            2003..2069
                     /anticodon=(pos:2034..2036,aa:Ile)
                     /product="transfer RNA-Ile"
                     /gene="tRNA-Ile"
                     /citation=[1]
                     /note="putative"
     tRNA            2085..2151
                     /anticodon=(pos:2114..2116,aa:Gln)
                     /product="transfer RNA-Gln"
                     /gene="tRNA-Gln"
                     /citation=[1]
                     /note="putative"
     tRNA            2157..2221
                     /anticodon=(pos:2187..2189,aa:Asp)
                     /product="transfer RNA-Asp"
                     /gene="tRNA-Asp"
                     /citation=[1]
                     /note="single strand sequenceing nucleotides 2199-2221;
                     putative"
     rRNA            2222..3465
                     /product="large subunit ribosomal RNA"
                     /citation=[1]
                     /note="single strand sequenceing nucleotides 2222-3293;
                     locations of 5' and 3' ends imprecisely known; putative"
     misc_feature    3466..4623
                     /function="unknown"
                     /citation=[1]
                     /note="no known coding function.; may contain replication
                     origin; putative"
     tRNA            4624..4690
                     /anticodon=(pos:4655..4657,aa:Tyr)
                     /product="transfer RNA-Tyr"
                     /gene="tRNA-Tyr"
                     /citation=[1]
                     /note="putative"
     CDS             <1..245
                     /transl_except=(pos:244..255,aa:other)
                     /gene="ND5"
                     /citation=[1]
                     /note="stop; single strand sequencing; putative"
                     /product="NADH dehydrogenase subunit 5"
                     /codon_start=1
                     /translation="EDVVYSKFNFSSWEGVFFKGSSTVAQSLDQGWLELLGPQGVHAG
                     LGQFSCLNEIVQKNYFTYQLVVWGLLVAGGVSLIIFMX"
     CDS             246..722
                     /gene="ND6"
                     /citation=[1]
                     /note="single strand sequencing nucleotides 246-592;
                     codons as in gene ND5; putative"
                     /product="NADH dehydrogenase subunit 6"
                     /codon_start=1
                     /translation="MSVMIMCVSLMSVFSIVLIAKQPISLGLVFIEGSMIACVEIALE
                     VSSLLGFLLFLTYVSGVMVLFLYVLSIYPNEVYRFNLEFVMIVSSCCAMMGLVGLMNY
                     EYVEISGSIIFKVYGWSKGVKPMYPNSSRFAVCDVSGVVFVYKNHSAFAKSKMSSS"
     CDS             4692..>5297
                     /gene="cyt b"
                     /citation=[1]
                     /note="single strand sequenceing nucleotides 4795-5297;
                     codons as in gene ND5; putative"
                     /product="cytochrome b"
                     /codon_start=1
                     /translation="MVGNNTAYNTNAPKSVGPWRSTNKLVKIMNDSFYDLPCPVNLNA
                     WWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFDSVVHIMRNVEKGWMLRNIHANGS
                     SMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSYWGATV
                     ITNMLSVXPVVGESMLRYVWGGXTVCNATLKRFYTLHFLLPF"
BASE COUNT     1617 a    726 c   1227 g   1721 t      6 others
ORIGIN      
        1 gaggatgtgg tttatagaaa gtttaacttc tcatcctggg aaggtgtctt ttttaaaggg
       61 tcaagaacag tggcccaaag tttggaccaa ggttgactag agctattggg gcctcaaggc
      121 gttcatgctg gattaggtca attcagttgc ttaaatgaga ttgtccagaa aaactatttt
      181 acttatcagc tagtggtctg aggcttatta gtagccgggg gcgttagctt aattattttt
      241 atataatgag agttataatt atatgtgtaa gtttgatgtc tgtattctcg atcgtgttga
      301 ttgctaagca accaatctct ttagggctag tatttattga ggggtctata attgcatgtg
      361 tggaaattgc attggaggtt agaagtctgt tagggttctt gttattttta acttatgtta
      421 ggggcgtgat agtcttgttc ttatatgttc ttagtattta tcctaatgag gtgtatcgct
      481 ttaatttaga gtttgttata attgtgagaa ggtgctgtgc tatgatgggc cttgtgggat
      541 taatgaatta tgagtatgta gagattagtg ggtcnattat ttttaaggtt tatggctgaa
      601 ggaagggggt taagcctata tatcctaata gcaggcgttt tgctgtttgt gatgttagtg
      661 gtgtcgtatt tgtgtataaa aaccatagtg cctttgcgaa gagtaaaata aggtcaagat
      721 aaaagatacg gtagcttaat taaagcgtct cattgaaaat gaggaagatg gatactttag
      781 taccttgtgt caagtctgta ggagggtttg attatggcct taaatttata gacaaaatgc
      841 ttctcatgat tctaaatgcg agcttgaaca gattaaggat aagttcaaca tcagtgggga
      901 aaattggtta ataaaggaac tttaacccag ctttttgata atttcggggt taattgatga
      961 atgccagcag ccgcggttag attcagttcg aatataaatt taagcggatt ggttagagtc
     1021 aatgttgggt ctataaaact ataaaaaaac tataggtgca gtgtaatgtt aacggttttt
     1081 tgtggttata ttcctgaagt tttagtgagt ttctaacgaa tctatgaagt gaaaccagga
     1141 ttagataccc tgttatccat agtttaaaac agaagttcct cttaactaaa catttggttg
     1201 tcaaagagaa ataaataggc ggtgtctgag atagaaaaca ggggatcctg ggtgttaaag
     1261 gataacccac ctacatttga gccttgtctt attagtgcgt gtgtatggtt gtttactcta
     1321 atatggtgag tgtccgggta aaaattttgg ttattgctaa agttagggtt tattttattg
     1381 gttaagtttg gtaaaataag ttagctttag ctagatgcag ctagtagaag gggtttattc
     1441 acctttgtag cacagcttca aaaataattc agattgacat gcagcttatg ataaggttaa
     1501 tctgggatac agttgcagct taagcaatag tttaaattta aactattaag tagtataaat
     1561 aatctaacga ataaggtaag aaaacttgac tttgaagaag gacttgtaag taagggttga
     1621 aaataaaacc gccctgaata caatcagatg agtactaatc gcccgtcgct cgcggggaaa
     1681 cctgtgaaaa gtcgtaacaa ggtagcagta acggaagttg ttgctaggcc ataatatgca
     1741 tatatagtaa acaatattat atttgccttc caagcaaaag tcctaataaa attagtgtat
     1801 gctggccaaa tagtttaact taaaacgttg agctgttaat tcaaaattgc agtaatttgc
     1861 tttggcttgc ttaagtagtt tagggaaaac ataagatttt cattcttaag tcagaaagca
     1921 gttctcttaa gttgtgctta gtagttaatg ttaatataac taagaactgc aaattcttca
     1981 tagtctagtt agacctaagc ttagtgccac gtgggggatg atccagttgc tttgatgaag
     2041 cagagctcaa aattagattt ttggcactta gagttttgga gtgttataaa gaagtattgt
     2101 ggtacgtagg actttgatcc ctaaagagaa agttaaagct tttctttata attatcttaa
     2161 aagtagttaa tatataactt agaattgtca gttctagatt ccttttacta aggcttttta
     2221 taagttatct ttactaaaaa gacgtgcata attgttttgt gaaaagtgga cttgaacaaa
     2281 gttagtataa ataaatttta gtaccttttg cataagggtt tttcaagatc aatttaagaa
     2341 tttaattttc ccgaataaaa gagagttatt tttttgagtt aggaaatcgt ggtagagatt
     2401 tgattaaact aaagaatggc ggctagatac tattcgcgct tttagatatc tggnnggctt
     2461 aaaaaaatgt gtaagcattt tctttaacta gttaaggggt aaaatttttt gggttaagct
     2521 gaaaaatggt gaaattgatg tttaaaaatt tttggtttct atcaggcttt aaactggcta
     2581 ttaggtatta gtgtatttta actaaaacca aacggagaaa aagattaatt ggggtcatca
     2641 tctatttaaa aataagccta tgatcggagg gtcagtaatt atgataaaaa cgagtaaaaa
     2701 tattattttt ttggtatcac tgttttgttt taccttaaaa gattgacggc taaataaagg
     2761 tttttaaatg aactcggcaa actaaacttc tcgactgttt aacaaaaaca tttccttttg
     2821 atgtaagtaa aaggtagtcc ctgcccagtg caactagagt aatgtctgtt gtaaacggcg
     2881 gcgttaacgt gagcgtccta aggtagcgcg ataatttgct tttcaattga aggatggtat
     2941 gaaagggtta acgaagaagg tgctgtgtct aaaaattcaa tttaaactaa ctttaaggtg
     3001 aagaggcctt tatgtaaaag aaggacgaca agaccctatg aagctttatc ttaattggag
     3061 ctctcaggct cttatacgat tttgatggga gatcagtaga aataagtctt ctactatcat
     3121 attaatctta ctagtatttc ctaactttat atgtgtggct agctactcta gggataacag
     3181 cgcaatttct cccgaaagat ggtattggag gggaagattg cgacctcgat gttggcttta
     3241 gatatcctag aggcggagaa gcttctgatg gtgggtctgt tcgcccttta aaatctaaca
     3301 tgagctgagt tcagaacggc gtgagctagt tcagtttcta tcctcttttt gaaatgagct
     3361 aattttgtac gaaaggactt tttcgctaaa gcaatgcttt gtcacaaatc tgtggttgca
     3421 taaataatag ggtataatag gttgattagc ctataggaag ggttaccttt tatgtaaatg
     3481 agcatattgc ttggtgatag gttgttaagt gtggtagatt ttagagaagt cctatgtagc
     3541 tggtttaaag caggcttttt agtaaaaaaa gacctgctgt tgaggggagt gtgagatact
     3601 tttctttcac ataaaaattc catgtttgga atagatgcag gagatggggg cttatgccag
     3661 ggaggagaag gtgacggtgc ccaagcacgt gttactcctg aagctgtatg gggtggtgga
     3721 gatacacctg taaatgcggg cgccgaagcc gctcctgata atgcggagga ggcggggggg
     3781 tacgttggag acgctatgcc cttccgttag aagaagtagg ttgtagttca gttgaagaaa
     3841 gagaaagggc tgtcgcggag cctgaagttg tatctagcgg tttcgagccg gtcgagcaga
     3901 gaggtgtgct aattagcgaa gctagtggtg ccattaatgc tggcaaagaa aggtttagtg
     3961 attgttaatg cccaggtcta aaggttgctg gtgcgctaat aatcgtactt tattaagata
     4021 atttatcagc taagcaaaat tacacttaaa tagtgtttgc taggctttac tatattttat
     4081 tttaaaattg gtcctatgcg gctgcaaaca tttaattaac ctcgttttag ttatgctcta
     4141 tagcctgtaa aatataaagc tgcaaagctt tacagctgat aagcatttgt cagagtcatg
     4201 tgagacttaa cctaattagt aaaaaaacaa gcggaaattt aaagcctcaa atcctagagt
     4261 tatcgaattt ttatggtaaa ttgtaaactg taaaatggga tttggaaagg tctaattttt
     4321 ctcgtttgac ttaattctgg ttgctcacgt gacttacctg ggtttgaaaa ctagactata
     4381 tctatcttaa aatcaaaata tatatataaa tcaaggttaa aaaaaattcc caaagcgtaa
     4441 attatcggtt gtttaaagaa ataactaata aaggctaaca aaaaaggaaa aaaaaaaaag
     4501 taacatacta atgcctgggg gggggctgac cggagggggg aaaagggaaa atataggtcc
     4561 acgcgtagaa aaaaaaaatg tggtgtgtaa gggacgtata gctatatata caaaaaaaaa
     4621 gaccatagga tggccgagga ataggtggtg agctgtaaac tcataaacaa ggcgtaagcc
     4681 tttcttatga gatggttggt aacaatactg catataacac taacgcgcct aaaagggttg
     4741 gtccgtgacg aagtacaaat aaactggtaa agattatgaa tgatagattc tatgatttgc
     4801 cttgtcctgt aaacttaaac gcctggtgaa ggtttggctc tatactaggc ttgtgtctgg
     4861 ttatccaact tttgaggggt cttttattat cagcccacta cactgctcat gaagacatgg
     4921 catttgactc tgtagtccac attatgcgta atgtggaaaa ggggtgaata ttgcgcaata
     4981 tccatgcaaa tgggtcttct atgttcttta tttgcattta tgctcacatt gctcgtgggt
     5041 tgtactatgg gtcttatttg gataagaccg tgtggtactt tggggtacac ctgttcttgt
     5101 tgactatggc tgaggctttt ctcggctata ctctgccttg ggggcagata tcgtactggg
     5161 gggctactgt aatcactaat atacttagag taakscctgt ggtaggtgaa aggatacttc
     5221 gctatgtatg aggggggngg actgtgtgta atgcaacgtt aaagcggttt tacacacttc
     5281 acttcctttt accgttt
//