From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Streptomyces aureofaciens principal sigma- like factor (hrdC) gene,
Date: 28 Jan 93 05:48:53 GMT
Distribution: bionet
Checksum: 11750 5

LOCUS       STMHRDC      1965 bp ds-DNA             BCT       27-JAN-1993
DEFINITION  Streptomyces aureofaciens principal sigma- like factor (hrdC) gene,
            complete cds.
ACCESSION   M90412
KEYWORDS    principal sigma-like factor; rpoD homologue.
SOURCE      Streptomyces aureofaciens (strain CCM 3239) DNA.
  ORGANISM  Streptomyces aureofaciens
            Prokaryotae; Firmicutes; Streptomycetaceae.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Kormanec,J., Farkasovsky,M. and Potuckova,L.
  TITLE     Four genes in Streptomyces aureofaciens containing a domain
            characteristic of principal sigma factors
  JOURNAL   Gene 122, 63-70 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_unit     37..69
                     /rpt_type=INVERTED
                     /gene="hrdC"
     RBS             114..119
                     /gene="hrdC"
     repeat_unit     312..338
                     /rpt_type=INVERTED
                     /gene="hrdC"
     repeat_region   457..483
                     /rpt_type=INVERTED
                     /gene="hrdC"
     repeat_region   1753..1779
                     /rpt_type=INVERTED
                     /gene="hrdC"
     CDS             126..1712
                     /gene="hrdC"
                     /product="principal sigma-like factor"
                     /codon_start=1
                     /translation="MSLSPSRTFPPEIAESEALVALVERGREQGHINGDDVRQAFEAG
                     RIPVDQWKRVLRSLNQVLDEEGVALHVSAAPATKAAAKKPRKAAAAPARTVTKKAAAP
                     PRPIGARKTSAAAPAAAAAISAPSAAATGDEATAEAAAEPKKRTVKKTAAKKATATKK
                     TAATKKAGAKDGDDAENPAVEGEDWAVEDLADEAEEETPKAGGTQGFVLSDDDEDDAP
                     AQTVMVAGATADPVKDYLKLIGKVPLLNAEQEVELAKRIEAGLFSEYKLEEEEDHKPA
                     FKRELEILVEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNVGLIRAVEK
                     FDYTKGFKFSTYATWWIRQAITRAMADQSRTIRIPVHMVEIINKLARVQRQMLQDLGR
                     EPTPEELGKELDMTPEKVIEVQKYGREPISLHTPLGEEGDSEFGDLIEDSEAVVPADA
                     VSFTFLQEQLQSILGTLSEREAGVVSMRYGLNDGQPKTLDEIGRVYGVTRERIRQIES
                     KTMSKLRHPSRSQVLRGYLD"
BASE COUNT      337 a    721 c    658 g    249 t
ORIGIN      
        1 gcatgcgatg aaccgacagg tgtcctcgcg cggccccgga atacagaccc ccctcgggtc
       61 tgtttcccga gttcgcgcga tgatgtcccg cccacccctt atctgttcgc aacgagaggc
      121 tccttgtgtc gctcagcccg tcccgtacgt tccctccgga gatcgccgaa tcggaggccc
      181 tcgtcgcgct cgtcgagcgc ggccgcgagc agggtcacat caacggtgac gatgtgcgcc
      241 aggccttcga ggccggccgc atcccggtgg accagtggaa gcgggtcctg cgcagcctga
      301 accaggtcct ggacgaggag ggtgtcgccc tccacgtcag cgccgccccc gccaccaagg
      361 ctgccgccaa gaagccccgc aaggcggccg ccgcccccgc ccgcaccgtg acgaagaagg
      421 ccgccgcccc gccgcgcccc atcggcgcgc gcaagacctc ggcggcggcc cccgccgccg
      481 cggcggcgat atccgctccg tcggccgccg caaccgggga cgaggcgacg gccgaggccg
      541 ccgccgagcc gaagaagcgc acggtcaaga agaccgccgc caagaaggcc acggccacca
      601 agaagaccgc cgccacgaag aaggccggcg ccaaggacgg cgacgacgcc gagaacccgg
      661 ccgtcgaggg cgaggactgg gccgtcgagg acctcgccga cgaggccgag gaggagacgc
      721 ccaaggcggg cggaacccag ggcttcgtcc tgtccgacga cgacgaggac gacgcccccg
      781 cgcagacggt catggtcgcg ggcgccaccg ccgaccccgt caaggactac ctgaagctga
      841 tcggcaaggt gccgctcctc aacgccgagc aggaggtgga gctcgccaag cgcatcgagg
      901 cgggtctctt ctccgagtac aagctcgaag aggaggagga ccacaagccc gcgttcaagc
      961 gcgagctgga gatcctcgtc gaggacggcc gccgcgccaa gaaccacctg ctggaggcca
     1021 acctccgcct cgtggtctcg ctggccaagc gttacaccgg ccgcggcatg ctcttcctgg
     1081 acctgatcca ggagggcaac gtcggtctga tccgcgcggt ggagaagttc gactacacca
     1141 agggcttcaa gttctccacg tacgcgacct ggtggatccg gcaggcgatc acccgcgcca
     1201 tggccgacca gtcgcgcacc atccgcatcc ccgtccacat ggtcgagatc atcaacaagc
     1261 tcgcccgtgt gcagcgccag atgctccagg acctcggccg cgagcccact ccggaggagc
     1321 tgggcaagga actcgacatg acccccgaga aggtcatcga ggtccagaag tacggccgcg
     1381 agccgatctc cctgcacacc ccgctgggtg aggagggcga cagcgagttc ggtgacctca
     1441 tcgaggactc cgaggcggtc gtcccggccg acgccgtgtc cttcaccttc ctccaggagc
     1501 agctccagtc catcctgggc acgctctcgg agcgcgaggc gggcgtggtc tccatgcgct
     1561 acggcctcaa cgacgggcag ccgaagaccc tggacgagat cggtcgcgtg tacggggtca
     1621 cccgtgagcg catccgccag atcgagtcca agaccatgtc gaagctgcgc cacccgtcgc
     1681 gttcgcaggt gctgcgcggc tacctcgact gatccggccc cggccccgcg ggccggtggt
     1741 ggaacgcgga acgcccgcgc cgttctcaac ggcgcgggct tccgcgttcg ggccgcgtcc
     1801 ctcaggcggc cgggtgttcg agcatgtgtt tcagcttctc ctcgccccgg ggcatctcct
     1861 tgcgggcgaa gggccgcacc aggagcggga cgagggcccg cccgacgccg tggccctcga
     1921 agtccatggc gagggtcacc cgggagcgcc ggccgtcgcc gaggg
//