From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Eubacterium sp. (clone OSVL-2) 16S ribosomal RNA, partial sequence.
Date: 6 Nov 92 18:28:11 GMT
Distribution: bionet
Checksum: 49626 4

LOCUS       EUBRRDI      1382 bp ss-rRNA            RNA       02-NOV-1992
DEFINITION  Eubacterium sp. (clone OSVL-2) 16S ribosomal RNA, partial sequence.
ACCESSION   L04711
KEYWORDS    16S ribosomal RNA.
SOURCE      Eubacterium sp. (strain Octopus Spring:OS Type K) (library: Octopus
            Spring V-Long) cDNA to rRNA.
  ORGANISM  Eubacterium sp.
            Prokaryotae; Eubacteria.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Ward,D.M., Bateson,M.M., Weller,R. and Ruff-Roberts,A.L.
  TITLE     Ribosomal RNA analysis of microorganisms as they occur in nature
  JOURNAL   Adv. Microb. Ecol. 12, 219-286 (1992)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Ward,D.M., Kopczynski,E.D., Heimbuch,B.K., Bateson,M.M. and
            Weller,R.
  TITLE     Uncultivated cyanobacteria, Chloroflexus-like and Spirochete-like
            inhabitants of a hot spring microbial mat
  JOURNAL   Appl. Environ. Microbiol. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            <1..>1382
                     /note="aligns with Escherichia coli 16S rRNA from base
                     pair 24 to 1392"
                     /note="putative"
                     /citation=[2]
                     /citation=[1]
     unsure          replace(55..57,"gg")
                     /note="base may or may not be present"
                     /citation=[2]
                     /citation=[1]
     unsure          replace(407..409,"ct")
                     /note="base may or may not be present"
                     /citation=[2]
                     /citation=[1]
     unsure          replace(1071..1073,"gt")
                     /note="base may or may not be present"
                     /citation=[2]
                     /citation=[1]
BASE COUNT      302 a    349 c    458 g    243 t     30 others
ORIGIN      
        1 tcagaatgaa cgctggcggc gtgcctaaca catgcaagtc tatcgcgagg cccggtgcaa
       61 cccgcgagtc gagcggygaa cgggtgagta acgcgtgggt aacctaccca ggagaggggg
      121 atagccccgc gaaagtgggg gtaatacngt acgctctccg gtgcacaagc gccggagagg
      181 aaaggtgggn ntcttcttcg gggncctgcc gctcctggat gggcccngtc cattagctag
      241 ttggtggggt aacggcctac caaggcgacg atcggtagcc ggcctgagag ggtgaccggc
      301 cacattggga ctgagacacg gcccagactc ctacgggagg cagcagtggg gaatattggg
      361 caatgggcga aagcctgacc cagcgacgcc gcgtgaggga tgaaggcctt cgggttgtaa
      421 acctctgtca gggggnacga acgcgtcccg gtgaacagcc ggygygtctg acggtacctc
      481 caaaggaagc cccggctaac tccgtgccag cagccgcggt aatacggagg gggngagcgt
      541 tattcggaat tactgggcgt aaagygygyg caggtggctg ggtaagtggc aggtgaaatc
      601 ccttggctca accgaggaac tgcctgccaa actgctctgc ttgaggccgg gagggggtaa
      661 cggaattcct ggtgtagcgg tgaaatgcgt agataccagg aggaacaccg gtggcgaagg
      721 cggcttcctg gaccggttat gacactcatg cgcgaaagcg tggggagcaa acaggattag
      781 ataccctggt agtccacgcc ctaaacgatg ggcactaggc gtcgcgggtg tcgacccctg
      841 cngtgccgta gctaacgcgt taagtgcccc gcctggggag tacggtcgca aggctgaaac
      901 tcaaaggaat tgacnggggc ccgcacaagc gtggagcatg tggtttaatt cgatgcaacg
      961 cgaagaacct tacctgggtt tgaactgctg gggaccgttc tggagacaga atcttccctt
     1021 cggggactcc agcagaggtg ctgcatggct gtcgtcagct cgtgccgtga ggtgttgggt
     1081 taagtcccgc aacgagcrca acccttnccc ctagttgcca rcrggtaatg ccggggactc
     1141 tagggggact gccggtgaca aaccggagga annnngggat gacgtcaagt catcatggcc
     1201 tttatgtcca gggctacaca cgtgctacaa tggtcggtac aaagggctgc aaacccgcga
     1261 ngggagctaa tcccaaaaag ccnncctcag ttcggattgc agtctgcaac tcgactgcat
     1321 gaaggtggaa tcgctagtaa tcgcgtatca gaacgacncg gtgaatacgt tcccnnncct
     1381 tg
//