From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Feline rotavirus mRNA for VP4.
Date: 21 Dec 92 20:18:09 GMT
Distribution: bionet
Checksum: 43158 6

LOCUS       FRVVP4       2359 bp ss-mRNA            VRL       18-NOV-1992
DEFINITION  Feline rotavirus mRNA for VP4.
ACCESSION   D10971
KEYWORDS    VP4; VP5; VP8.
SOURCE      Feline rotavirus (strain FRV-1) cDNA to mRNA.
  ORGANISM  Feline rotavirus
            Viridae; ds-RNA nonenveloped viruses; Reoviridae; Rotavirus.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Isegawa,Y., Nakagomi,O., Nakagomi,T. and Ueda,S.
  TITLE     A highly conserved VP4 sequence shared by human rotavirus strain
            AU-1 and feline rotavirus strain FRV-1
  JOURNAL   J. Gen. Virol. (1992) In press
  STANDARD  full automatic
COMMENT     Submitted (20-Apr-1992) to DDBJ by: Yuji Isegawa Dept. of
            Preventive Medicine Res. Institute for Microbial Diseases Osaka
            University Yamadaoka, Suita Osaka 565 Japan Phone:  06-877-5121
            x3127 Fax:    06-875-1170.
FEATURES             Location/Qualifiers
     mat_peptide     10..1116
                     /product="VP8"
                     /codon_start=1
     mat_peptide     1117..2334
                     /product="VP5"
                     /codon_start=1
     CDS             10..2337
                     /gene="VP4"
                     /product="polyprotein"
                     /codon_start=1
                     /translation="MASLIYRQLLSNSYVTNISDEVNEIGTKKTTNVTVNPGPFAQTG
                     YAPVDWGHGELPDSTLVQPTLDGPYQPTSLNLPVDYWMLIAPTREGRVAEGTNTTDRW
                     FACVLVEPNVQNTQRQYVLDGQNVQLQVSNDSSTSWKFILFIKLTPDGTYTQYSTLST
                     PHKLCSWMKRDNRVYWYQGSSPNASESYYLTINNDNSNVSSDAEFYLIPQSQTAMCTQ
                     YINNGLPPIQNTRNIVPVNIASRQIKDIRAQMNEDIVISKTSLWKEMQYNRDIIIRFK
                     FANSIIKSGGLGYKWSEISFKPMNYQYTYTRDGEEVTAHTTCSVNGVNDFNYNGGTLP
                     TDFAISRFEVIKENSYVYVDYWDDSQAFRNMVYVRSLAANLNDVVCSGGSYSFALPVG
                     NHPVMSGGAVTLTSAGVTLSTQYTDYVSLNSLRFRFRLAVSEPSFSISRTRMSGIYGL
                     PAVNPNNNAEYYEIAGRFSLISLVPTNDDYQTPIANSVTVRQDLERQLGELREEFNSL
                     SQEIAVSQLIDLATLPLDMFSMFSGIKSTVEAVKSMTTNVMKRFKTSSLANAISDLTS
                     NMSEAASSVRLTSVRSIGTVTLPRARVSLQVSDDLRSMQDVSTQVSNVSRNLRLKEFT
                     TQTDTLSFDDISAAVLKTKLDKSTQISQQTMPDIIAESSEKFIPKRSYRIVDEDTAFE
                     TGIDGTFYAYKVDTFNEIPFDMERFNKLITDSPVLSAIIDFKTLKNLNDNYGITKKQA
                     MELLHSNPKTLKEFINNNNPIIRNRIENLISQCRL"
BASE COUNT      844 a    390 c    458 g    667 t
ORIGIN      gene segment 4.
        1 ggctataaaa tggcttcttt aatttataga cagttattat caaactcata tgttacgaac
       61 atctctgacg aagttaacga aattggaact aaaaaaacaa ctaacgttac tgttaatcca
      121 gggccgttcg cacaaacggg atatgcgcct gttgattggg gacatggtga attgcctgat
      181 tctacattag tgcaaccaac tctcgatggt ccatatcaac ccacttcact caacttacca
      241 gttgattatt ggatgttaat tgcgcctact agagaaggaa gagttgctga aggtacgaat
      301 acgactgaca gatggtttgc ttgtgtgcta gttgaaccaa atgtacaaaa tacacaaaga
      361 caatacgtat tagatgggca aaatgtccaa ttgcaggtct caaacgattc aagtacttcg
      421 tggaaattta tattattcat taaattgacg cctgacggaa cgtacactca atactcaacc
      481 ttgtcaacac cgcataagtt atgctcgtgg atgaaaaggg acaacagagt gtactggtat
      541 caaggatcgt cgccgaacgc atcagagagc tattatttga ctataaacaa tgataacagc
      601 aacgtttcaa gtgacgctga attttatttg ataccgcaat cgcagactgc tatgtgtaca
      661 caatatataa ataatggttt accaccaatt cagaatacaa ggaatattgt accagtaaat
      721 attgcatcta gacagattaa agacataaga gctcagatga atgaagacat agtaatatcg
      781 aaaacttcat tatggaaaga aatgcaatat aatagagata taatcattag atttaaattt
      841 gctaattcaa taatcaaatc aggtggacta ggttataagt ggtcggaaat atcatttaag
      901 cccatgaact atcaatatac gtacacaaga gatggagaag aagtgacagc acatacaaca
      961 tgttcagtga atggtgtcaa tgattttaat tataatggag gtacgttacc tactgatttt
     1021 gcaatatcga gatttgaggt cataaaggaa aattcttatg tatatgtaga ttattgggat
     1081 gattcacaag catttagaaa tatggtatat gtaaggtcgt tagctgcaaa tttgaatgat
     1141 gtagtatgca gtggaggttc ttacagtttt gcgttacctg taggcaatca tccggtgatg
     1201 agtggtggcg cagtgacctt aacatctgct ggtgtaacac tatcaactca gtatacagat
     1261 tatgtatcat taaattcatt gcgattcaga ttcagattgg cggtgagcga accatcattt
     1321 tctatctcgc gaactagaat gagtggcata tacggattac cagctgtaaa tccaaataat
     1381 aacgcagaat attatgagat agctggtaga ttctcactca tatcactagt accaacaaat
     1441 gatgactatc aaacgccaat cgctaattca gttaccgtga gacaagattt agagagacaa
     1501 ttaggtgagt taagagaaga attcaattcg ttgtcacaag aaatagctgt ttcccaactt
     1561 atagacctag caacactacc gcttgatatg ttctcaatgt tctctggaat aaaatcaacg
     1621 gtagaggcag taaaatctat gactacgaac gtgatgaaaa gatttaaaac atcaagttta
     1681 gcaaacgcca tatctgattt aacaagcaat atgtcggaag cggcatcatc tgtaagattg
     1741 acgtcagtaa gatcgattgg cactgttaca ttgccaagag ctagagtttc attgcaagta
     1801 agtgatgact taaggtctat gcaggacgta tcaacacaag tgtcaaatgt gagtagaaat
     1861 ttgagattga aagagttcac gacgcaaact gatactttaa gctttgatga catctctgca
     1921 gctgtattga agacgaaact agacaaatcg acgcaaattt cacaacaaac gatgccagat
     1981 attatagctg agtcatctga aaagtttata ccgaaaagat cgtacagaat agttgatgag
     2041 gataccgcat tcgaaactgg aattgacgga acgttttatg cttacaaagt cgatacattt
     2101 aatgaaattc cgtttgatat ggaacgattt aataaattaa taacagactc accagtttta
     2161 tcagcaataa tagactttaa gacgttaaag aacttaaacg ataattatgg aataacaaag
     2221 aaacaagcca tggaactatt acattcaaat ccaaagacat taaaagagtt tataaataat
     2281 aataatccaa taattagaaa tagaattgaa aatttaatat cgcagtgtag gttgtaactg
     2341 tctattttaa gatgtgacc
//