From: yugawa@bill.genes.nig.ac.jp (Yoshihiro Ugawa)
Subject: Network Server Announcement
Summary: DDBJ/NIG started fasta, ftp, WAIS, Gopher server
Keywords: fasta, ftp, WAIS, Gopher
Organization: National Institute of Genetics in Japan
Date: Wed, 16 Dec 1992 07:11:24 GMT


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---

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$@#1(J E-mail address

        fasta@nig.ac.jp

$@#2(J parameter

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$@!!(J begin
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$@#4(J $@%a!<%k$N5-=RNc(J
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$@#4(J.$@#1(J $@Aw?.%a!<%k(J

From: Toshiya Sakamaki <tsakamak>
To: fasta@nig.ac.jp
Subject: search by fasta
Date: Mon, 9 Nov 92 16:35:00 JST
         
program         fasta
datalib         DNA
ktup            6
scores          20
alignmnts       20

begin
>
tgcttgcattaccggatagatagcatgatcgatcatgcatgcatgcatgcatgctagctacaccgatgcac
gctagctagctacgatcgatgcatcgagcatgatcgttgatcacagtcagt
//

$@#4(J.$@#2(J $@JV?.%a!<%k(J
From: daemon@nigcray (Background Daemon)
To: Toshiya Sakamaki <tsakamak@genes.nig.ac.jp>
Subject: Re: search by fasta
Date: Mon, 9 Nov 92 16:44:34 JST

 > : 129 nt
 vs  library
 searching /home/nigcray/db/DB_SEARCH/FASTA/DATA/fasta.data library


     initn   init1
<  4   100   100:==================================================
   8     0     0:
  12     0     0:
  16     0     0:
  20     0     0:
  24   158   158:==================================================
  28    95    95:================================================
  32    44    44:======================
  36    13    13:=======
  40    33    33:=================
  44     1     1:=
  48     2     2:=
  52     0     0:
  56     0     0:
  60     0     0:
  64     0     0:

        ---  $@ESCf0lItN,(J  -----

 156     0     0:
 160     0     0:
>160     0     0:
 217108 residues in   446 sequences
 statistics exclude scores greater than 121
 mean initn score:  21.9 (12.69)
 mean init1 score:  21.9 (12.69)
  346 scores better than 1 saved, ktup: 6, fact: 6
 joining threshold: 46  scan time:  0:00:01
The best scores are:                                  initn init1   opt
SYNCRYIAA    1845 bp ds-DNA             SYN       21-M   48    48    63
SYNARGMTUB    249 bp ds-DNA             SYN       30-S   45    45    66
SYNECOPRMA    759 bp ds-DNA             SYN       15-M   42    42    51
SYNDHFRII     220 bp ds-DNA             SYN       15-J   40    40    45
Genetic Sequence Data Bank, 4870 bases, 1390 checksum.   40    40    40
SYNBLKSP     2958 bp ds-DNA   Circular  SYN       06-D   40    40    40
SYNBLSKM     2958 bp ds-DNA   Circular  SYN       06-D   40    40    40
SYNBLSKP     2958 bp ds-DNA   Circular  SYN       06-D   40    40    40

        ---  $@ESCf0lItN,(J  -----

SYN0SYNOR     204 bp ds-DNA             SYN       16-F   32    32    32
SYNCRYIAA    1845 bp ds-DNA             SYN       21-M   48   48   63
  84.0% identity in 25 nt overlap

       20        30        40        50         60        70
       GATAGCATGATCGATCATGCATGCATGCATGCAT-GCTAGCTACACCGATGCACATGGCT
                                     ::::  ::: X::::::::::X ::
SYNCRY GGAGCCCACACTTGATGGACATCTTGAACAGCATAACTATCTACACCGATGCTCACAGAG
          880       890       900       910       920       930

        80        90       100       110       120
       AGCTAGCTAGCTACGATCGATGCATCGAGCATGATCGTTGATCACAGTCAGT

SYNCRY GAGAGTATTACTGGTCTGGACACCAGATCATGGCCTCTCCAGTTGGATTCAGCGGGCCCG
          940       950       960       970       980       990

SYNARGMTUB    249 bp ds-DNA             SYN       30-S   45   45   66
  60.3% identity in 73 nt overlap


        ---  $@ESCf0lItN,(J  -----

                                     10        20        30
                             TGCTTGCATTACCGGATAGATAGCATGATCGATCATGC
                                     X::::::::X   ::    : :: ::  ::
SYNCOL TGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATA---AGGCGCAGCGGTCGGGC
            370       380       390       400          410

       40        50        60        70        80        90
       ATGCATGCATGCATGCTAGCTACACCGATGCACATGGCTAGCTAGCTAGCTACGATC---
        :: : :   :  :  :    ::: :   ::     :: : : : ::: :  ::: :
SYNCOL -TGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTA-CACCGAACTGA
      420       430       440       450       460        470

         100       110       120
       GATGCATCGAGCATGATCGTTGATCACAGTCAGT
       ::: : :  ::: ::: :  :::
SYNCOL GATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACA
       480       490       500       510       520       530

Library scan:  0:00:01  total CPU time:  0:00:02

    $@2?$+LdBj$,$"$C$?>l9g$K$O!"(Jtrouble@nig.ac.jp$@!!$K$*<j;f2<$5$$!#(J


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      $@$^$?$O(J
    ftp 133.39.16.66

$@#D#D#B#J$N(JANONYMOUS-FTP SERVER$@$N9=@.$O!"(J/$@%G%#%l%/%H%j$K$"$k(JREADME$@%U%!(J
$@%$%k$d(J/dna$@%G%#%l%/%H%j$K$"$k(JREADME.dna$@%U%!%$%k$K=q$+$l$F$$$^$9!#$3$l$i(J
$@$r%U%!%$%kE>Aw$7!"$4Mw2<$5$$!#(J
$@#D#N#AG[Ns0J30$N!"%G!<%?$d%=%U%H$O!"(J/pub$@%G%#%l%/%H%j$J$I$KCV$+$l$F$$$^(J
$@$9!#(J

$@A4$F$N#D#N#AG[Ns%G!<%?$O!"(JACCESSION number$@$4$H$KJ,$1$FCV$+$l$F$$$^$9!#(J
$@!J8=:_!"(Jsecondary accession number$@$G$N8!:w$O2DG=$K$J$C$F$$$^$;$s!#$3$l(J
$@$i$N8!:w$O!"(JWAIS$@$d(JGopher$@%5!<%P!<$r$4MxMQ2<$5$$!#!K(J
$@Nc$($P!"(JD00066 $@$H$$$&G[Ns$O!"(J/dna/D/00/06/D00066$@%G%#%l%/%H%j$K$*$+$l$F(J
$@$$$^$9!#$3$N%G!<%?$rE>Aw$7$?$$>l9g$O<!$N$h$&$K$7$^$9!#(J


    % ftp ftp.nig.ac.jp
    Connected to ftp.nig.ac.jp.
    220 night FTP server (Version 5.63 Mon Jul 13 15:27:15 JST 1992) ready.
    Name (ftp.nig.ac.jp:mishima): anonymous
    331 Guest login ok, send ident as Your E-Mail address).
    Password: <$@$3$3$G(Jyugawa@ddbj.nig.ac.jp$@Ey!"<+J,$N(JE-mail$@%"%I%l%9$rF~$l$^$9(J>
    230 Guest login ok, access restrictions apply.
    ftp> cd /dna/D/00/06/D00066
    250 CWD command successful.
    ftp> ls -la
    200 PORT command successful.
    150 Opening ASCII mode data connection for /bin/ls.
    total 20
    drwxr-xr-x  2 dbm           512 Aug 28 02:13 .
    drwxr-xr-x 11 dbm           512 Aug 27 13:56 ..
    -rw-r--r--  1 dbm          5934 Aug 27 08:41 D00066.D
    -rw-r--r--  1 dbm          4784 Aug 28 02:13 D00066.E
    -rw-r--r--  1 dbm          6240 Aug 27 16:42 D00066.L
    226 Transfer complete.
    remote: -la
    272 bytes received in 1.1 seconds (0.24 Kbytes/s)
    ftp> get D00066.L
    200 PORT command successful.
    150 Opening ASCII mode data connection for D00066.L (6240 bytes).
    226 Transfer complete.
    local: D00066.L remote: D00066.L
    6335 bytes received in 0.11 seconds (54 Kbytes/s)
    ftp> quit
    221 Goodbye.
    %

$@%U%!%$%kL>$NKvHx$N(J D,E,L,N$@$O!"%G!<%?$,$I$37PM3$GMh$F$$$k$+$r<($7$F$$$^(J
$@$9!#(JD00066.D$@$O#D#D#B#J!"(JD00066.E$@$O(JEMBL data lib.$@!"(JD00066.L(N)$@$O!"(J
GenBank$@7PM3$N$b$N$G$9!#(J

$@$5$,$7$?$$G[Ns(J(ACCESSION number)$@$,8+$D$+$i$J$$>l9g$O!"<!$N$3$H$,9M$($i(J
$@$l$^$9!#B?$/$N>l9g!"G[Ns$NEPO?<T(J(Author)$@$O!"G[Ns$r%G!<%?%P%s%/$KEPO?$7(J
ACCESSION number$@$r$b$i$C$F$$$F$b!"$=$NG[Ns$NO@J8$,H/I=$5$l$k$^$G%G!<%?(J
$@$N8x3+$r5qH]$7$F$$$^$9!#%G!<%?%P%s%/$G$OO@J8$NH/I=$r3N$+$a$F$+$i8x3+$N(J
$@<jB3$-$r$H$j$^$9$+$i!"$3$N4V<c43$NCY$l$,@8$8$^$9!#$b$7!"O@J8$K(J
ACCESSION number$@$,5-$5$l$F$$$kG[Ns$,!"$3$N%5!<%P$G8+$D$+$i$J$+$C$?$i!"(J
$@$=$NO@J8$N;(;oL>!"H/9TG/!"JG!"Cx<T!"%?%$%H%k$rEE;R%a!<%k(J
(ddbjupdt@ddbj.nig.ac.jp)$@$GAw$C$F$$$?$@$/$+!"#D#D#B#J$K(J
FAX(0559-75-6040)$@$G$4O"Mm$/$@$5$$!#Aa5^$K8x3+$N<jB3$-$r$H$j$^$9!#(J




$@#3!K(JWAIS SERVER$@!V%M%C%H%o!<%/J8=q8!:wJ}<0$rMxMQ$7$?%5!<%P!<!W(J

$@!!(JWAIS$@$O(Jthink.com$@Ey$G3+H/$5$l$?%7%9%F%`$G(JWide Area Information 
Servers$@$N$3$H$G$9!#%G!<%?%Y!<%9Fb$NG$0U$NJ8;zNs$KBP$9$k%$%s%G%C%/%9$r(J
$@$"$i$+$8$a:n$C$F$*$-!"8!:wMW5a$K?WB.$KEz$($k$3$H$,$G$-$^$9!#FCI.$9$Y$-(J
$@$3$H$O!"$3$l$i$N8!:wL?Na$,!"%M%C%H%o!<%/7PM3$G9T$o$l$k$3$H$G$9!#MxMQ$9(J
$@$k$K$O!"(JWAIS client$@$r!"3F<+;HMQ$7$F$$$k7W;;5!$KMQ0U$7$^$9!#%M%C%H%o!<(J
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ANONYMOUS-FTP$@$G8x3+$5$l$F$$$F!"$?$H$($P!"(J
fly.bio.indiana.edu:/util/wais$@$K$O!"(Jwais-8-b5.tar.Z$@$N$[$+!"(JAND/OR$@$N8!(J
$@:w$r%5%]!<%H$7$?(Jiubio-wais-8b5.tar.Z$@$bCV$+$l$F$$$^$9!#%$%s%9%H!<%k$K$O(J
$@$"$kDxEY$N(Junix$@$NCN<1$,I,MW$G$9!#(J
$@!!#D#D#B#J$N(JWAIS$@$O!"(JANONYMOUS-FTP SERVER$@$GDs6!Cf$N#D#N#A%G!<%?$KBP$9$k(J
$@%$%s%G%C%/%9$r;}$A!"%G!<%?%Y!<%9Fb$NG$0U$NJ8;zNs$K$h$k%-!<%o!<%I8!:w$,(J
$@$G$-$k$N$,FCD9$G$9!#(J
$@!!#D#D#B#J$N(JWAIS source(dna.src)$@$O0J2<$NDL$j$G$9!#(J
$@!!!!(J(:source 
$@!!!!(J   :version  3 
$@!!!!(J   :ip-address "133.39.16.66"
$@!!!!(J   :ip-name "night"
$@!!!!(J   :tcp-port 210
$@!!!!(J   :database-name "dna"
$@!!!!(J   :cost 0.00 
$@!!!!(J   :cost-unit :free 
$@!!!!(J   :maintainer "sgk@night"
$@!!!!(J   :description "Server created with WAIS release 8 b5 on Sep  9 00:25:42 1992
$@!!!!!!!!(J by sgk@night
$@!!!!(JThe files of type bio used in the index were:
$@!!!!(J   /ftp/dna
$@!!!!(J"
$@!!!!(J)

$@!N(JWAIS SERVER$@$N;HMQJ}K!!O(J

WAIS$@$N(JClient$@$r%$%s%9%H!<%k$7$?$"$H!"8!:w$r3+;O$9$kA0$K!"BP>]$H$J$k%5!<(J
$@%P!<$r;XDj$9$k$?$a$N4D6-$r@0$($^$9!#6qBNE*$K$O!"%[!<%`%G%#%l%/%H%j$K(J
wais-sources$@$H$$$&%G%#%l%/%H%j$r:n$j!"$=$NCf$KBP>]$H$J$k%5!<%P!<$N(J"
$@%G!<%?%Y!<%9L>(J.src"$@$H$$$&%U%!%$%k$r:n$j$^$9!#(J

  % cd
  % mkdir wais-sources
  % cd wais-sources
  
$@0dEA8&$N(Jwais$@$rMxMQ$9$k$K$O!"$3$N%G%#%l%/%H%j$NCf$KA0=R$N(J dna.src $@$r:n(J
$@@.$7$^$9!#(Jnight.locus.nig.ac.jp$@$r;HMQ$7$F$$$k>l9g$O!"(J
/ftp/other_wais/dna.src$@$K$3$N%U%!%$%k$,MQ0U$7$F$"$k$N$G%3%T!<$7$F$/$@(J
$@$5$$!#$5$F!"<B:]$K(Jwais$@$rMxMQ$9$k%3%^%s%I$O!"(Jwaissearch$@$H$$$&%3%^%s%I$G(J
$@$9$,!"0dEA8&$G$O!"$h$j4JC1$K;HMQ$G$-$k$h$&(Jws$@$H$$$&%3%^%s%I$K$7$F$"$j$^(J
$@$9!#(J
  ws $@%G!<%?%Y!<%9L>(J $@%-!<%o!<%I(J
$@Nc$($P!"0dEA8&$N%G!<%?%Y!<%9$+$i(Jmeningitidis$@$H(Jpenicillin$@$H$$$&%-!<%o!<(J
$@%I$rN>J};}$D%G!<%?$r8!:w$r$9$k$K$O!"0J2<$N$h$&$K$7$^$9!#(J

night% ws dna meningitidis and penicillin
waissearch -h night -d dna -p 210 meningitidisandpenicillin

 Search Response:
  NumberOfRecordsReturned: 10
   1: Score: 1000, lines:  54 'M26644.D N.meningitidis penicillin-bindin'
   2: Score: 1000, lines:  65 'M26644.L N.meningitidis penicillin-bindin'
   3: Score:  973, lines:  64 'M26644.E N.meningitidis penicillin-bindin'
   4: Score:  703, lines:  77 'X15276.L Neisseria meningitidis penA gene'
   5: Score:  676, lines:  75 'X15276.E Neisseria meningitidis penA gene'
   6: Score:  649, lines:  52 'M26645.L N.flavescens penicillin-binding '
   7: Score:  649, lines:  56 'M26645.E N.flavescens penicillin-binding '
   8: Score:  378, lines:  68 'Z17308.E N.cinerea penA gene for penicill'
   9: Score:  378, lines:  68 'Z17309.E N.cinerea penA gene for penicill'
  10: Score:  378, lines:  67 'Z17310.E N.cinerea penA gene for penicill'

View document number [type 0 or q to quit]: 

$@$3$3$G!";2>H$7$?$$HV9f$rF~NO$7$^$9!#(J0 $@$^$?$O(J q $@$rF~NO$9$k$H!"JL$N%-!<(J
$@%o!<%I$rF~NO$9$k$3$H$,$G$-$^$9!#0J2<$N$h$&$K!";2>H$7$?$$HV9f$rF~NO$7$?(J
$@>l9g$O!"$=$N%U%!%$%k$,I=<($5$l$^$9!#(J

View document number [type 0 or q to quit]: 1

Headline: M26644.D N.meningitidis penicillin-bindin
LOCUS       NGOPENAM     1797 bp ds-DNA             BCT       15-JUN-1990
DEFINITION  N.meningitidis penicillin-binding protein 2 (penA) gene, complete
            cds.
ACCESSION   M26644
KEYWORDS    penicillin-binding protein 2.
SOURCE      N.meningitidis (strain S738; serogroup B) DNA.
  ORGANISM  Neisseria meningitidis
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Spratt,B.G., Zhang,Q.-Y., Jones,D.M., Hutchison,A., Brannigan,J.A.
            and Dowson,C.G.
  TITLE     Recruitment of a penicillin-binding protein gene from Neisseria
            flavescens during the emergence of penicillin resistance in
            Neisseria meningitidis
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 86, 8988-8992 (1989)
  STANDARD  full staff_review
COMMENT     Draft entry and computer-readable sequence for [1] kindly submitted
            by B.G.Spratt, 02-AUG-1989.
FEATURES             Location/Qualifiers
     CDS             25..1773
                     /note="penicillin-binding protein 2"
                     /codon_start=1
BASE COUNT      458 a    441 c    495 g    403 t
ORIGIN
        1 ggataataat aacgagaagt aaaaatgttg attaagagcg aatataagcc tcggatgctg
       61 cccaaagaag agcaggtcaa aaagccgatg accagtaacg gacggatcag cttcgtcctg
      121 atggcaatag cggtcttgtt tgccggtctg attgcccgcg gactgtatct gcagacggta
      181 acgtataact ttttgaaaga acagggcgac aaccggattg tgcggactca aacattgccg
      241 gctacacgcg gtacggtttc ggaccggaac ggtgcggttt tggcgttgag tgcgccgacg
      301 gagtccctgt ttgccgtgcc taaagagatg aaggaaatgc cgtctgccgc acaattggaa
      361 cgcctgtccg agcttgtcga tgtgccggtt gatgttttga ggaacaagct cgaacagaaa
      421 ggcaagtcgt ttatctggat taagcggcag ctcgatccca aggttgccga agaggtcaaa
      481 gccttgggtt tggaaaactt tgtatttgaa aaagaattaa aacgccatta cccgatgggc
      541 aacctgtttg cacacgtcat cggatttacc gatattgacg gcaaaggtca ggaaggtttg
      601 gaactttcgc ttgaagacag cctgcatggc gaagacggcg cggaagtcgt tttgcgggac
      661 cggcagggca atattgtgga cagcttggac tccccgcgca ataaagcccc gaaaaacggc
      721 aaagacatca tcctttccct cgatcagagg attcagacct tggcctatga agagttgaac
      781 aaggcggtcg aataccatca ggcaaaagcc ggaacggtgg tggttttgga tgcccgcacg
      841 ggggaaatcc tcgccttggc caatacgccc gcctacgatc ccaacaggcc cggctgggca
      901 gacagcgaac agcgccgcaa ccgcgccgta accgatatga ttgaacccgg ctctgccatg
      961 aagccgttta ccattgccaa agcattggat tccggcaaag tggatgcaac cgatacattc
     1021 aataccctgc cttacaaaat cggtccggct accgtacaag atacccacgt ttatcctact
     1081 ttggatgtgc gcggcattat gcaaaaatct tccaacgtcg gtaccagtaa actttctgcc
     1141 atgtttacgc ctaaagaaat gtacgatttc tatcacgatt taggtgtggg cgtgcgtatg
     1201 cactcgggct ttccgggcga aactgcaggt ttgttgagaa attggcgcag gtggcggcct
     1261 atcgaacagg cgacgatgtc tttcggttac ggcctgcaat tgagcctgct gcaattggcg
     1321 cgcgcctata ccgcactgac gcacgacggc gttttgctgc cggtcagctt tgaaaaacaa
     1381 gcggttgcgc ctaaaggcaa gcgcgtcatc aaagcctcta ctgcaaaaaa agtgcgcgag
     1441 ttgatggttt ccgttactga agccggcggt accggtactg caggtgctgt ggatggtttc
     1501 gacgtaggtg cgaaaaccgg tacggcgcgc aaactagtca atggccgcta tgtggacaac
     1561 aaacacgtcg gtacgtttat cggttttgct ccggctaaaa atccacgcgt gattgtggcc
     1621 gttaccatcg acgagccgac tgccaacggc tattacggcg gcgtggttgt cggtcccgta
     1681 ttcaaagaag tcatgagcgg aagcttgaac atcttgggcg tttccccgac caagcctttg
     1741 agtaataccg ctactgtcaa agtaccgtca taatccaaac aatcaaagag atattgt

View document number [type 0 or q to quit]: q
Search for new words [type q to quit]: q

q $@$rF~NO$9$F=*N;$7$^$9!#(J




$@#4!K(JGOPHER SERVER$@!V%-%c%s%Q%9%M%C%H%o!<%/J}<0$rMxMQ$7$?%5!<%P!<!W(J

$@!!(JGOPHER$@$O%_%M%=%?Bg3X$G3+H/$5$l!"A0=R$N(JANONYMOUS-FTP$@$d(JWAIS$@$r<h$j9~(J
$@$_!"99$K2~NI$,2C$($i$l$?:G?7$N%M%C%H%o!<%/>pJs%7%9%F%`$G$9!#%M%C%H%o!<(J
$@%/Fb$r<+M3$K9T$-Mh$7!"8!:w!"I=<(!"E>Aw$r<+F0E*$K9T$&!"M%$l$?%^%s!&%^%7(J
$@%s!&%$%s%?!<%U%'%$%9$r;}$C$F$$$^$9!#MxMQ$9$k$K$O!"(JGOPHER client$@$rMxMQ(J
$@<T$,3F<+;HMQ$7$F$$$k7W;;5!$KMQ0U$7$^$9!#$3$N%=%U%H%&%(%"$O(J
ANONYMOUS-FTP$@$G8x3+$5$l$F$$$F!"(Jboombox.micro.umn.edu:/pub/gopher$@$K(J
Macintosh-TurboGopher, NeXT, PC_client, Rice_CMS, Unix, VMS, 
Vienna_CMS, mvs, os2$@MQ$N(Jclient$@$,$"$j$^$9!#(J
$@!!#D#D#B#J$N(JGOPHER$@$O(JANONYMOUS-FTP SERVER$@$GDs6!Cf$N%G!<%?$rBP>]$K(JWAIS$@$N(J
$@G$0U$NJ8;zNs$N8!:w5!G=$r<h$j9~$s$G$$$^$9!#$5$i$K!"@$3&$G2TF/Cf$N<g$J%P(J
$@%$%*4XO"$N(JGOPHER SERVER$@$X$N%j%s%/$bMQ0U$7$F$$$^$9!#(J
$@!!#D#D#B#J$N(JGopher server$@$O0J2<$NDL$j$G$9!#(J

 $@!!(J Name=DNA Data Bank of Japan, National Institute of Genetics, Mishima
 $@!!(J Type=1
 $@!!(J Port=70
$@!!(J  Path=
$@!!(J  Host=gopher.nig.ac.jp


gopher$@$N(Jclient$@$O2?<oN`$b$"$j$^$9!#$3$3$G$O!"(Jtelnet$@$J$I$N(Jtty$@C<Kv$+$iMx(J
$@MQ$9$k(Jgopher$@!"(JInternet$@$KD>7k$5$l$?(JMac$@$+$iMxMQ$9$k(JTurboGopher$@!"(JX$@C<Kv$+(J
$@$iMxMQ$9$k(Jxgopher$@$N>R2p$r$7$^$9!#(J

$@#4(J-$@#1!K(Jgopher$@$N;HMQJ}K!!'(J
client$@$r%$%s%9%H!<%k$7$?8e!"(J
$@!!(J% gopher gopher.nig.ac.jp 70
$@$H$9$k$H!"#D#D#B#J$N(JGOPHER SERVER$@$,8F$S=P$;$^$9!#(J

$@Bh#12hLL(J            Internet Gopher Information Client v1.03
                   Root gopher server: night.locus.nig.ac.jp
      1.  DDBJ_gopher/
      2.  DDBJ_wais/
      3.  Maintainer_"ftp@nig.ac.jp".
      4.  README.
      5.  about_DDBJ/
 -->  6.  dna/
      7.  joho/
      8.  ls-lR.
      9.  ls-lR.
      10. ls-lR.diff.
      11. ls-lR.diff.
      12. ls-lR.full.
      13. ls-lR.full.
      14. other_ftp/
      15. other_gopher/
      16. other_wais/
      17. protein/
      18. pub/

Press ? for Help, q to Quit, u to go up a menu                    Page: 1/2

$@$3$3$G!!(J?$@$rF~NO$9$k$H4JC1$JA`:nJ}K!$,I=<($5$l$^$9!#(J
$@%+!<%=%k$r#6$KF0$+$7!"#D#N#A>pJs$N2hLL$K0\$j$^$9!#(J


$@Bh#22hLL(J            Internet Gopher Information Client v1.03
                                      dna
      1.  D/
      2.  J/
      3.  K/
      4.  L/
      5.  M/
      6.  Maintainer_"ddbj@ddbj.nig.ac.jp".
      7.  N/
      8.  README.dna.
      9.  S/
      10. V/
      11. X/
      12. Y/
      13. Z/
 -->  14. index_search.src <?>
      15. index_search_is_OFF_on_Sunday.
Index word(s) to search for: Penicillin

$@%+!<%=%k$r#1#4$KF0$+$7%j%?!<%s%-!<$r2!$7!"(JPenicillin$@$GJ8;zNs8!:w$r$7$^(J
$@$9!#(J


$@Bh#32hLL(J            Internet Gopher Information Client v1.03
                          index_search.src: Penicillin
 -->  1.  M32226.L S.sanguis penicillin-binding pro.
      2.  M32227.L S.oralis penicillin-binding prot.
      3.  M32228.L S.oralis penicillin-binding prot.
      4.  M32226.E S.sanguis penicillin-binding pro.
      5.  M32227.E S.oralis penicillin-binding prot.
      6.  M32228.E S.oralis penicillin-binding prot.
      7.  M32091.L N.gonorrhoeae penicillin binding.
      8.  M32091.E N.gonorrhoeae penicillin binding.
      9.  X06479.E E. coli dacA gene for penicillin.
      10. X59460.L E.coli dacB gene for penicillin-.
      11. X59460.E E.coli dacB gene for penicillin-.
      12. M26645.L N.flavescens penicillin-binding .
      13. M26645.E N.flavescens penicillin-binding .
      14. M26644.D N.meningitidis penicillin-bindin.
      15. M26644.L N.meningitidis penicillin-bindin.
      16. M26644.E N.meningitidis penicillin-bindin.
      17. M90528.N Streptococcus oralis penicillin-.
      18. M90528.L Streptococcus oralis penicillin-.

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LOCUS       STRPBP2BA    1455 bp ds-DNA             BCT       23-FEB-1990
DEFINITION  S.sanguis penicillin-binding protein 2B (penA) gene, 5' end.
ACCESSION   M32226
KEYWORDS    penicillin-binding protein 2B.
SOURCE      S.sanguis (strain 1907-penicillin resistant) DNA.
  ORGANISM  Streptococcus sanguis
            Prokaryotae; Firmicutes; Firmibacteria; Gram-positive cocci;
            Streptococcaceae.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Dowson,C.G., Hutchison,A., Woodford,N., Johnson,A.P., George,R.C.
            and Spratt,B.G.
  TITLE     Penicillin-resistant viridans streptococci have obtained altered
            penicillin-binding protein genes from penicillin-resistant strains
            of Streptococcus pneumoniae
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87, 5858-5862 (1990)
  STANDARD  full staff_entry
COMMENT     Draft entry and computer-readable sequence [1] kindly submitted by
            B.G. Spratt, 16-FEB-1990, for release after publication.
FEATURES             Location/Qualifiers
     CDS             <1..1436
--More--(28%)

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