From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: glutaminyl tRNA...NADH dehydrogenase subunit ND5 [Trichophyton
Date: 22 Dec 92 22:47:11 GMT
Distribution: bionet
Checksum: 39550 12

LOCUS       S113709      5249 bp    DNA             NLM       23-NOV-1992
DEFINITION  glutaminyl tRNA...NADH dehydrogenase subunit ND5 [Trichophyton
            rubrum, Mitochondrial, 8 genes, 5249 nt]
ACCESSION   S45009 X65223
KEYWORDS    .
SOURCE      Trichophyton rubrum
  ORGANISM  Mitochondrion Trichophyton rubrum
            Unclassified.
REFERENCE   1  (bases 1 to 5249)
  AUTHORS   de Bievre,C. and Dujon,B.
  TITLE     Mitochondrial DNA sequence analysis of the cytochrome oxidase
            subunit I and II genes, the ATPase9 gene, the NADH dehydrogenase
            ND4L and ND5 gene complex, and the glutaminyl, methionyl and
            arginyl tRNA genes from Trichophyton rubrum.
  JOURNAL   Curr. Genet. 22, 229-234 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 113709.
            This sequence comes from Fig. 1.  Map location: H2 mitochondrial
            genome segment.
FEATURES             Location/Qualifiers
     tRNA            126..197
                     /note="Description: glutaminyl tRNA"
     tRNA            271..341
                     /note="Description: methionyl tRNA"
     tRNA            2293..2363
                     /note="Description: arginyl tRNA"
     CDS             534..2120
                     /note="For the protein sequence (NCBI gibbsq 113710):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 1.  Map location: H2
                     mitochondrial genome segment."
                     /gene="COXI"
                     /product="cytochrome oxidase subunit I"
                     /codon_start=1
                     /translation="MWKERWFLSTNAKDIGTLYLMFRYFSGLVGTAFSVLIRLELSAP
                     GVQYIADNQLYNSIITAHAILMIFFMVMPALIGGFGNFLLPLLVGGPDMAFPRLNNIS
                     FWLLIPSLLLFVFASIIENGAGTGWTLYPPLASIQSHSGPSVDLAIFGLHLSGISSLL
                     GAMNFITTIINMRSPGIRLHKLALFGWAVLITAVLLLLSLPVLAGAITMLLTDRNFNT
                     SFFELAGGGDPIFIQHLFWFFGHPEVYILIVPGFGIISTVISANSSKNVFGYLGMVYA
                     MMSIGILGFVFWSHHMYTVGLDVDTRAYFIAATLIIAVPTGIKIFSWLATCYGGSLNL
                     TPAMLFALGFVVMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSG
                     WYFWIPKLLGLSYDLFAGKVHFWILFVGVNLTLFPQHFLGLQGMPRRIGDYPDAFAGW
                     NLISSFGSIVSVVATWYFLNILYLQLTQGSPVSRYPWLTPQYFSDLFQHLFTRNNSSL
                     EWCLNSPPKPHAFDCLPVQS"
     CDS             join(2525..2714,2949..2989)
                     /note="For the protein sequence (NCBI gibbsq 113717):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 1.  Map location: H2
                     mitochondrial genome segment."
                     /product="ATPase subunit 9"
                     /codon_start=1
                     /translation="MIQAAKIIGTGLATTGLIGAGVGIGVVFGALILGVARNPSLRGL
                     LFSYAILGFAFSEATGLSEFALMMAFLLLYVA"
     CDS             3184..3897
                     /note="For the protein sequence (NCBI gibbsq 113718):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 1.  Map location: H2
                     mitochondrial genome segment."
                     /gene="COXII"
                     /product="cytochrome oxidase subunit II"
                     /codon_start=1
                     /translation="INLVAPTPWGLFFQDSATPQMEGIEELHNNIMFYLTIILFSVTW
                     MMITIIKSFVNTKSPISHKYMNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVMD
                     PSLVIYGEGHQWYWSYQYPDFTNADGEFVEFDSYIVPESDLEEGTLRMLEVDNRVIIP
                     ELTHTRFVISAADVIHSFACPSLGIKCDAYPGRLNQSSVYLNRQGTYFGQCSEICGIL
                     HSSMPIVIQSVSLKNFYYD"
     CDS             3969..4238
                     /note="For the protein sequence (NCBI gibbsq 113719):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 1.  Map location: H2
                     mitochondrial genome segment."
                     /product="NADH dehydrogenase subunit ND4L"
                     /codon_start=1
                     /translation="MNLSLILFLIGILGFVLNRKNIILMLISIEIILLSVTFLILISS
                     LNFDDILGQTFAIYIITIAGAESAIGLGILVAFYRLRGSIAIEYK"
     CDS             4238..5248
                     /partial
                     /note="For the protein sequence (NCBI gibbsq 113720):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 1.  Map location: H2
                     mitochondrial genome segment."
                     /product="NADH dehydrogenase subunit ND5"
                     /codon_start=1
                     /translation="MYLVIIFLPLLGSIISGFFGRKIGVQGAQLITSSFIIITTMLAI
                     FNFFEVGYNNIPLEINLFRWIDSESINILWGFYFDSLTVSMLIPVLIVSSLVHIYSIG
                     YMSHDPHNQRFFSYLSLFTFMMIILVTANNYLLMFLGVEGVGVCSYLLVNFWFTRIAA
                     NQSSISAFLTNRVGDCFLTIGMFIIIWSFGNLDYSTVFSLAPYFNQEFITLIGICLLI
                     GAMAKSSQIGLHVWLPQAMEGPTPVSALIHAATMVTAGVYLLMRSSPLIEYSSTVLIL
                     CLWLGAITTIFSSIIGLFQQDIKKVIAYSTMSQLGMMVIAIGLSSYNLALFHLVNHAF
                     YKA"
BASE COUNT     1787 a    570 c    778 g   2114 t
ORIGIN      
        1 aagctttata agttcaagtc ttattatcca taggtctaaa cttataaata ttaattgaat
       61 ttatttgaat taatcaatta ttagattacc tctattaatt tagattaata atatattaat
      121 attttatgtt gttgactaag aggtaagtca taaatttttg gtatttagct atgagtgttc
      181 gaatcgctcc aacataatta tataataatg taaaataata aaattattat ttttaaaaat
      241 tatgtattaa aattatgaat aattaaatta gcccgagtag tttaatggta gaacaataat
      301 ttcatgaatt aagaatgaga attcgatttt ctcctcaggt atttatttta gttaaaaaaa
      361 aaattttttt tttaattaag gtggatatag aacaatccgg tagaacagct gtatgtggca
      421 tagtatatcc ttgttcgcga tcagtatcac ctttgctata tataataact taataaatat
      481 cgtaatagca gtataaatct aatcaagtga ttcagcagat atttaatata acaatgtgaa
      541 aagaaagatg atttttatca acaaatgcta aggatattgg aacattatat cttatgtttc
      601 gttatttttc aggtttggtt ggtacagctt tctcagtttt aattagattg gagttatcag
      661 ctccaggtgt acaatatata gctgataatc aattatataa tagtattatt acagctcatg
      721 ctattttaat gatattcttt atggttatgc cagctttaat aggtggtttt ggtaattttt
      781 tattaccatt attagtagga ggaccagata tggcatttcc tagattaaat aatataagtt
      841 tttgattatt aatacctagt ttattattat ttgtatttgc ttctattata gaaaatggtg
      901 caggtacagg ttgaacattg taccctccat tagcaagtat acaaagtcat agtggtccta
      961 gtgtagattt agctattttt ggtttacatt taagtggtat aagttcactt ttaggtgcta
     1021 tgaattttat tacaacaata attaatatga gaagtccagg tattcgttta cataaattag
     1081 ctttatttgg ttgagccgta ttaataacgg ctgttttatt attattatca ttacctgtat
     1141 tagctggtgc aataacaatg ttattaacag atagaaattt taatacatct ttctttgaat
     1201 tagctggtgg tggtgatcct atttttatcc aacatttatt ctgatttttc ggtcatccag
     1261 aagtttatat tttaattgta cctggttttg gtattattag tactgtaatt tctgcaaatt
     1321 caagtaaaaa tgtatttggt tatctaggta tggtatatgc tatgatgtct ataggtatat
     1381 taggttttgt gttttgaagt catcatatgt atactgttgg tttagatgtt gatactagag
     1441 cttactttat agctgctaca ttaattattg cagtacctac aggtataaaa atatttagtt
     1501 gattagctac ttgttatgga ggttctttaa atttaacacc tgctatgtta tttgctttag
     1561 gttttgtagt tatgtttaca attggtggtt taagtggtgt tgttttagct aatgcttcac
     1621 ttgatattgc tttccatgat acttattatg ttgttgctca tttccattat gtactttcta
     1681 tgggagctgt ttttgcttta tttagtggtt gatatttctg aatacctaaa ttattaggtt
     1741 tatcttatga tttgtttgct ggtaaagtac atttctgaat attatttgta ggtgttaatt
     1801 taacattatt cccacaacat ttcttaggtt tacaaggtat gcctagacgt ataggtgatt
     1861 atcctgatgc ttttgctggt tgaaatttaa ttagtagttt cggttctatt gtaagtgttg
     1921 ttgctacatg atatttctta aatatcttat acttacaatt aactcaaggt tcacctgttt
     1981 caagatatcc ttgattaact cctcaatatt tcagtgattt attccaacat ttatttacta
     2041 gaaataatag ttctttagaa tgatgtttaa atagtccacc aaaaccacat gcatttgatt
     2101 gtttacctgt gcaatcttaa gtttttttta atatatattt tatttaaaat atttatttaa
     2161 ataattttta gtttaatata aacatttaat aattataata ttctaagcac aacatgttag
     2221 tttaagggtg ttagagaatt accgtgttac ggcgcacgat gatataagtt caaatcttat
     2281 agatgttgct tattcttatt agctcaatgg tagagcaaaa tacttctaat attttgatcc
     2341 tagttcgaat ctaggataag aatttcagct cttatagctc aggcgggtag agcaaaatac
     2401 gtgttaatat ttgtatagat gttcgatcca tcttgagggc ttttaagttt aatactttta
     2461 cagctatata gtaattattt atttggataa aggtttcctt agtaatataa tttataataa
     2521 taaaatgata caagcagcta aaataatcgg tacaggatta gctacaacag gtttaatagg
     2581 agcaggtgtt ggaataggtg ttgtttttgg tgctttaatt ttaggtgttg ctagaaaccc
     2641 ttcacttaga ggtctattat tctcatatgc tatcttaggt tttgctttct cagaagctac
     2701 aggtttaagc gaatagatct gttatagggt taattgcaag aaatatctta aagataaatt
     2761 tgcagcgaat attagtataa attatattat actaataacg ttcaacgact aaaaatgagt
     2821 agtgtaaaca aaaattttat aaatcctaca tttataaatg aagacatagt ctaaaacaac
     2881 aaaaaagtta aatgttttat tagaaatagt aataaaatta ttaatttttt attaattaat
     2941 ttgcgtattc gcattaatga tggctttctt attattatac gtagcctaaa taactataag
     3001 ttaaaataaa attcagatta ttttaataat taaaaaaaaa atgtatatat tttttttttt
     3061 aggtatattg atactttttt tttattacta ttgttataaa gaaatatata tatatatata
     3121 aatatgataa gaaatttatt tatttgaatt caatcattaa gtttaagtat taatcacaat
     3181 actataaacc ttgtagctcc aacaccttgg ggtttatttt ttcaagatag tgctacacct
     3241 caaatggaag gtatagaaga attacataat aatattatgt tttatttaac tatcatatta
     3301 ttttctgtaa catgaatgat gattactatt ataaaaagtt ttgtaaatac aaaatcacca
     3361 atatcacata aatatatgaa tcatggtaca ttaatagaat taatatgaac aataacacca
     3421 gctgttatat taatattaat agcatttcca tcatttaaat tattatattt aatggatgaa
     3481 gtaatggatc cttcattagt aatatacgga gaaggccacc aatgatattg aagttatcaa
     3541 tatccagatt ttacaaatgc agatggtgaa tttgtagaat ttgattcata tatagtacca
     3601 gaatcagatt tagaagaagg tacattaaga atgttagaag ttgataatag agtaataata
     3661 cctgaattaa cacatactag atttgtaata tcagctgctg atgttataca ttcatttgct
     3721 tgtccatcat taggaataaa atgtgatgca tatccaggta gattaaatca atcatcagta
     3781 tatttaaaca gacaaggtac ttattttgga caatgttcag aaatatgtgg tatattacat
     3841 agctcaatgc ctatagtaat acaatcagta agtttaaaaa atttttatta tgattaagag
     3901 atcaattagg tgattaatta attaataata ataataagta tatataataa tcttaatcgt
     3961 aaagtttaat gaatttatca ttaatattat ttttaatagg gattttaggt tttgttttaa
     4021 atagaaaaaa tataattcta atgcttattt caatagaaat aatattattg tctgttactt
     4081 ttttaatatt aataagttca cttaattttg acgatatatt aggtcaaact tttgctatat
     4141 atataataac aatagcaggt gctgaatctg ctataggatt aggtatatta gtagcttttt
     4201 atagattaag aggaagtata gcaatagaat ataaataatg tatttagtta ttattttctt
     4261 acctttatta ggttcaatta tatcaggatt ttttggtaga aaaataggtg tacaaggagc
     4321 acaattaata acatcaagtt ttattatcat aacaacaatg ttagctattt ttaacttttt
     4381 tgaagtaggt tataataata tacctttaga aataaattta tttagatgaa tagattcaga
     4441 atcaataaat atattatgag gtttttattt tgatagttta acagtaagta tgttaatacc
     4501 tgttttaata gtatctagtt tagtacatat atactctata ggttatatga gtcatgatcc
     4561 acataatcaa agatttttta gttatttaag tttatttact tttatgatga taatacttgt
     4621 aacagctaat aattatttat taatgttctt aggtgtagaa ggtgtaggag tttgttcata
     4681 tttattagtt aatttctgat ttactagaat agcagctaat caaagttcaa tctcagcttt
     4741 tttaactaat agagtaggtg attgtttctt aactataggt atgttcataa taatatgatc
     4801 ttttggtaat ttagattatt caactgtttt ttcattagct ccatacttta atcaagagtt
     4861 tataacatta ataggtatat gtttattaat tggtgctatg gcaaaaagtt cacaaatagg
     4921 tctacatgtt tgattacctc aagctatgga aggtcctaca cctgtatctg ctttaataca
     4981 tgcagctaca atggttacag caggtgtata tttattaatg agatcatctc cattaataga
     5041 atatagttca actgttttaa tactttgttt atgattaggt gctataacaa ctatatttag
     5101 ttctattata ggattatttc aacaagatat taaaaaagtt atcgcttatt ctacaatgag
     5161 tcaattaggt atgatggtaa tagctatagg attatcatca tataatttag cattatttca
     5221 tttagttaac catgcttttt ataaagctt
//