From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Marek's disease virus, glycoprotein B gene complete cds.
Date: 5 Jan 93 06:46:34 GMT
Distribution: bionet
Checksum: 27327 7

LOCUS       HSMGB        3214 bp ds-DNA             VRL       05-JAN-1993
DEFINITION  Marek's disease virus, glycoprotein B gene complete cds.
ACCESSION   D13713 D00506
KEYWORDS    glycoprotein B.
SOURCE      Marek's disease virus (strain RB1B), viral DNA, BamHI fragment.
  ORGANISM  Gallid herpesvirus type 1
            Viridae; ds-DNA enveloped viruses; Herpesviridae;
            Gammaherpesviridae.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ross,L.J., Sanderson,M., Scott,S.D., Binns,M.M., Doel,T. and
            Milne,B.
  TITLE     Nucleotide sequence and characterization of the Marek's disease
            virus homologue of glycoprotein B of herpers simplex virus
  JOURNAL   J. Gen. Virol. 70, 1789-1804 (1989)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     TATA_signal     87..92
                     /note="putative TATA box"
     CAAT_signal     171..178
                     /note="putative CAT box"
     TATA_signal     218..222
                     /note="putative TATA box"
     sig_peptide     361..423
                     /codon_start=1
     mat_peptide     424..2955
                     /product="glycoprotein B"
                     /codon_start=1
     polyA_signal    2983..2988
     polyA_signal    3113..3118
     CDS             361..2958
                     /product="glycoprotein B precursor"
                     /codon_start=1
                     /translation="MHYFRRNCIFFLIVILYGTNSSPSTQNVTSREVVSSVQLSEEES
                     TFYLCPPPVGSTVIRLEPPRKCPEPRKATEWGEGIAILFKENISPYKFKVTLYYKNII
                     QTTTWTGTTYRQITNRYTDRTPVSIEEITDLIDGKGRCSSKARYLRNNVYVEAFDRDA
                     GEKQVLLKPSKFNTPESRAWHTTNETYTVWGSPWIYRTGTSVNCIVEEMDARSVFPYS
                     YFAMANGDIANISPFYGLSPPEAAAEPMGYPQDNFKQLDSYFSMDLDKRRKASLPVKR
                     NFLITSHFTVGWDWAPKTTRVCSMTKWKEVTEMLRATVNGRYRFMARELSATFISNTT
                     EFDPNRIILGQCIKREAEAAIEQIFRTKYNDSHVKVGHVQYFLALGGFIVAYQPVLSK
                     SLAHMYLRELMRDNRTDEMLDLVNNKHAIYKKNATSLSRLRRDIRNAPNRKITLDDTT
                     AIKSTSSVQFAMLQFLYDHIQTHINDMFSRIATAWCELQNRELVLWHEGIKINPSATA
                     SATLGRRVAAKMLGDVAAVSSCTAIDAESVTLQNSMRVITSTNTCYSRPLVLFSYGEN
                     QGNIQGQLGENNELLPTLEAVEPCSANHRRYFLFGSGYALFENYNFVKMVDAADIQIA
                     STFVELNLTLLEDREILPLSVYTKEELRDVGVLDYAEVARRNQLHELKFYDINKVIEV
                     DTNYAFMNGLAELFNGMGQVGQAIGKVVVGAAGAIVSTISGVSAFMSNPFGALAIGLI
                     IIAGLVAAFLAYRYVNKLKSNPMKALYPMTTEVLKAQATRELHGEESDDLERTSIDER
                     KLEEAREMIKYMALVSAEERHEKKLRRKRRGTTAVLSDHLAKMRIKNSNPKYDKLPTT
                     YSDSEDDAV"
BASE COUNT     1006 a    636 c    697 g    875 t
ORIGIN      2161 bp upstream of BamHI site.
        1 tgtatttaaa tgtggcgaat tgcacatctg tcgtgccgac agtttgcaga tcaacagcaa
       61 tggagactat gtatggaaaa atggaatata tataacatat gaaaccgaat atccacttat
      121 aatgattctg gggtcagaat caagcacttc agaaacgcaa aatatgactg caattattga
      181 tacagatgtt ttttcgttgc tttattctat tttgcagtat atggcccccg ttacggcaga
      241 tcaggtgcga gtagaacaga ttaccaacag ccacgccccc atctgacccg tccaatattc
      301 ttgtgtccct gcattttatc tcacacaatt tatgaacagc atcattaaga tcatctcact
      361 atgcactatt ttaggcggaa ttgcattttt ttccttatag ttattctata tggtacgaac
      421 tcatctccga gtacccaaaa tgtgacatca agagaagttg tttcgagcgt ccagttgtct
      481 gaggaagagt ctacgtttta tctttgtccc ccaccagtgg gttcaaccgt gatccgtcta
      541 gaaccgccgc gaaaatgtcc cgaacctaga aaagccaccg agtggggtga aggaatcgcg
      601 atattattta aagagaatat cagtccatat aaatttaaag tgacgcttta ttataaaaat
      661 atcattcaga cgacgacatg gacggggacg acatatagac agatcactaa tcgatataca
      721 gataggacgc ccgtttccat tgaagagatc acggatctaa tcgacggcaa aggaagatgc
      781 tcatctaaag caagatacct tagaaacaat gtatatgttg aagcgtttga cagggatgcg
      841 ggagaaaaac aagtacttct aaaaccatca aaattcaaca cgcccgaatc tagggcatgg
      901 cacacgacta atgagacgta taccgtgtgg ggatcaccat ggatatatcg aacgggaacc
      961 tccgtcaatt gtatagtaga ggaaatggat gcccgctctg tgtttccgta ttcatatttt
     1021 gcaatggcca atggcgacat cgcgaacata tctccatttt atggtctatc cccaccagag
     1081 gctgccgcag aacccatggg atatccccag gataatttca aacaactaga tagctatttt
     1141 tcaatggatt tggacaagcg tcgaaaagca agccttccag tcaagcgtaa ctttctcatc
     1201 acatcacact tcacagttgg gtgggactgg gctccaaaaa ctactcgtgt atgttcaatg
     1261 actaagtgga aagaggtgac tgaaatgttg cgtgcaacag ttaatgggag atacagattt
     1321 atggcccgtg aactttcggc aacgtttatc agtaatacga ctgagtttga tccaaatcgc
     1381 atcatattag gacaatgtat taaacgcgag gcagaagcag caatcgagca gatatttagg
     1441 acaaaatata atgacagtca cgtcaaggtt ggacatgtac aatatttctt ggctctcggg
     1501 ggatttattg tagcatatca gcctgttcta tccaaatccc tggctcatat gtacctcaga
     1561 gaattgatga gagacaacag gaccgatgag atgctcgacc tggtaaacaa taagcatgca
     1621 atttataaga aaaatgctac ctcattgtca cgattgcggc gagatattcg aaatgcacca
     1681 aatagaaaaa taacattaga cgacaccaca gctattaaat cgacatcgtc tgttcaattc
     1741 gccatgctcc aatttcttta tgatcatata caaacccata ttaatgatat gtttagtagg
     1801 attgccacag cttggtgcga attgcagaat agagaacttg ttttatggca cgaagggata
     1861 aagattaatc ctagcgctac agcgagtgca acattaggaa ggagagtggc tgcaaagatg
     1921 ttgggggatg tcgctgctgt atcgagctgc actgctatag atgcggaatc cgtcactttg
     1981 caaaattcta tgcgagttat cacatccact aatacatgtt atagccgacc attggttcta
     2041 ttttcatatg gagaaaacca aggaaacata cagggacaac tcggtgaaaa caacgagttg
     2101 cttccaacgc tagaggctgt agagccatgc tcggctaatc atcgtagata ttttctgttt
     2161 ggatccggtt atgctttatt tgaaaactat aattttgtta agatggtaga cgctgccgat
     2221 atacagattg ctagcacatt tgtcgagctt aatctaaccc tgctagaaga tcgggaaatt
     2281 ttgcctttat ccgtttacac aaaagaagag ttgcgtgatg ttggtgtatt ggattatgca
     2341 gaagtagctc gccgcaatca actacatgaa cttaaatttt atgacataaa caaagtaata
     2401 gaagtggata caaattacgc gtttatgaac ggtttggccg aattgtttaa cggtatgggt
     2461 caggtagggc aagctatagg caaagttgta gtaggggctg ccggtgcaat cgtatctacc
     2521 atatctggtg tctctgcttt catgtcaaat ccctttgggg ctttggcaat cggtttaatc
     2581 attatagcag gactcgtggc tgcattttta gcatatcgtt atgtaaacaa gcttaaaagc
     2641 aatccaatga aagcccttta tcctatgaca acagaagtgc ttaaggcaca ggcaacgcgt
     2701 gagttgcatg gcgaggaatc agatgatttg gaacgaacat ctattgatga aagaaaatta
     2761 gaagaagcta gagaaatgat aaaatatatg gcgttagtct ccgcggaaga acgccacgag
     2821 aaaaaactgc ggagaaagag gcgaggcact accgccgttc tatcggacca cctggcaaaa
     2881 atgaggatta aaaatagtaa ccctaaatat gataagttac ctactacata ttcagactca
     2941 gaagatgatg ctgtgtaagt gggcactatt atatttgaac tgaataaaac gcatagagca
     3001 tgatatggtt tactcattta ttgcgagata taaagcatat tcaatacgat atattgcgaa
     3061 cgtgatgcta aaaacatagc tccctgtatt attgatgcgc catcatttga ttaataaata
     3121 catcgacgcc ggcatcactg gtgcggtgta taccagctac ggcgctagca ttcatggtat
     3181 cccgtgattg ctcgatgctt tccttctgaa ttcc
//