From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rhesus macaque polyoma virus major structural protein VP1 (5'end)
Date: 31 Dec 92 01:40:58 GMT
Distribution: bionet
Checksum: 44708 4

LOCUS       SV4VP1A       773 bp ds-DNA             VRL       17-DEC-1992
DEFINITION  Rhesus macaque polyoma virus major structural protein VP1 (5'end)
            and minor structural protein (VP2 or VP3; 3' end) genes.
ACCESSION   M99354
KEYWORDS    major structural protein VP1; minor structural protein VP2;
            minor structural protein VP3.
SOURCE      Rhesus macaque polyomavirus (strain Br91) DNA.
  ORGANISM  Rhesus macaque polyomavirus
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
            Polyomaviruses.
REFERENCE   1  (sites)
  AUTHORS   van Heuverswyn,H. and Fiers,W.
  TITLE     Nucleotide sequence of the Hind-C fragment of Simian Virus 40 DNA:
            comparison of the 5'-untranslated region of wild-type virus and of
            some deletion mutants
  JOURNAL   Eur. J. Biochem. 100, 51-60 (1979)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Ilyinskii,P.O., Daniel,M.D., Horvath,C. and Desrosiers,R.C.
  TITLE     Genetic analysis of simian virus 40 from brains and kidneys of
            macaque monkeys
  JOURNAL   J. Virol. 66, 6353-6360 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     variation       replace(361,"a")
                     /citation=[1]
                     /note="nucleotide 1756 in SV40 strain 776"
     variation       replace(544,"t")
                     /citation=[1]
                     /note="nucleotide 1939 in SV40 strain 776"
     variation       replace(556,"t")
                     /citation=[1]
                     /note="nucleotide 1951 in SV40 strain 776"
     variation       replace(649,"a")
                     /citation=[1]
                     /note="nucleotide 2044 in SV40 strain 776"
     CDS             1..225
                     /partial
                     /note="partial"
                     /codon_start=1
                     /translation="KFEAPGGANQRTAPQWMLPLLLGLYGSVTSALKAYEDGPNKKKR
                     KLSRGSSQKTKGTSASAKARHKRRNRSSRS"
     CDS             104..773
                     /partial
                     /note="partial"
                     /product="major structural protein VP1"
                     /codon_start=1
                     /translation="MKMAPTKRKGSCPGAAPKKPKEPVQVPKLVIKGGIEVLGVKTGV
                     DSFTEVECFLNPQMGNPDEHQKGLSKSLAAEKQFTDDSPDKDQLPCYSVARIPLPNLN
                     EDLTCGNILMWEAVTVKTEVIGVTAMLNLHSGTQKTHENGAGKPIQGSNFHFFAVGGE
                     PLELQGVLANYRTKYPAQTVTPKNATVDSQQMNTDHKAVLDKDNAYPVECWVPDPSKN
                     ENTRY"
BASE COUNT      252 a    146 c    178 g    197 t
ORIGIN      
        1 aaatttgagg ctcctggtgg tgcaaatcaa agaactgctc ctcagtggat gttgccttta
       61 cttctaggcc tgtacggaag tgttacttct gctctaaaag cttatgaaga tggccccaac
      121 aaaaagaaaa ggaagttgtc caggggcagc tcccaaaaaa ccaaaggaac cagtgcaagt
      181 gccaaagctc gtcataaaag gaggaataga agttctagga gttaaaactg gagtagacag
      241 cttcactgag gtggagtgct ttttaaatcc tcaaatgggc aatcctgatg aacatcaaaa
      301 aggcttaagt aaaagcttag cagctgaaaa acagtttaca gatgactctc cagacaaaga
      361 ccaactgcct tgctacagtg tggctagaat tcctttgcct aatttaaatg aggacttaac
      421 ctgtggaaat attttgatgt gggaagctgt tactgttaaa actgaggtta ttggggtaac
      481 tgctatgtta aacttgcatt cagggacaca aaaaactcat gaaaatggtg ctggaaaacc
      541 catacaaggg tcaaactttc atttttttgc tgttggtggg gaacctttgg agctgcaggg
      601 tgtgttagca aactacagga ccaaatatcc tgctcaaact gtaaccccca aaaatgctac
      661 agttgacagt cagcagatga acactgacca caaggctgtt ttggataagg ataatgctta
      721 tccagtggag tgctgggttc ctgatccaag taaaaatgaa aacactagat att
//