From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Variola virus ORF1 gene, complete cds.
Date: 26 Jan 93 05:53:46 GMT
Distribution: bionet
Checksum: 12838 4

LOCUS       VARORF1SQB   1560 bp ds-DNA             VRL       25-JAN-1993
DEFINITION  Variola virus ORF1 gene, complete cds.
ACCESSION   M95533
KEYWORDS    .
SOURCE      Variola virus (strain Somalia) DNA.
  ORGANISM  Variola virus
            Viridae; ds-DNA enveloped viruses; Poxviridae; Chordopoxvirinae.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Douglass,N.N. and Dumbell,K.K.
  TITLE     Independent evolution of monkeypox and variola viruses
  JOURNAL   J. Virol. 66, 7565-7567 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             388..1413
                     /note="ORF1"
                     /codon_start=1
                     /translation="MLILTKVNIYMLIIVLWLYGYNFIMSGSQCPMINDDRFTLKRKY
                     QIDSVESTMKMDKKRTKFQNRAKMVKEINQTIRAAQTHYETLKLGYIKFKKMIRTTTL
                     EDITTSIPNIQKIYKLFSDISAIGKVSQNPSKMAYALLLYMFPNLFGDDHRFILYRMF
                     PMSKIKHKIFSPFKLNLIRILVEERFYNNECRSNKWRIIGTQVDKMLIVESDKYTIDA
                     RYRLRPIYRIKGKSEEDTLFIKQMVDQCVTSQELVEKVLKILFRDLFKSGEYKAYRYD
                     DDVENGFIGLDKLKLNIVHDIVEPCMPVRRPVAKILCKEMVNKYFENPLHIIGKNLQE
                     CIDFVSE"
BASE COUNT      553 a    210 c    270 g    527 t
ORIGIN      
        1 ggtaccgcta gtacccttaa tcatgtcaca tagtgtttta tattccaaat ttgtggcaat
       61 ggacggttta tttctatacg atagtttgtt tctagaatcc tttgagtatt ctataccaat
      121 attattcttt gattcgaatt tagtttcttc gatattggat tttgtattac ctatattctt
      181 gatgtagtac tttgatgatt tttccatggc ccattctatt aagtcttcca agttggcatc
      241 atccacatat tgtgatagta attctcggat attagtagcg gctaccgcca ttgatgtttg
      301 ttcattggat gagtaactac taatgtatac attttccatt tataacacgt atgtattaac
      361 tttgttcatt tatatttttt cattattatg ttgatattaa caaaagtgaa tatatatatg
      421 ttaataattg tattgtggtt atatggctac aatttcataa tgagcggaag tcagtgtccg
      481 atgattaatg acgatagatt tactctgaaa agaaagtatc aaatcgatag tgtagagtca
      541 acaatgaaaa tggataagaa gaggacaaag tttcaaaata gagccaaaat ggtaaaagaa
      601 ataaatcaga caataagagc agcacaaact cattacgaga cattgaaact aggatacata
      661 aaatttaaga aaatgattag gactactact ttagaagata taacaacatc tattccaaat
      721 attcagaaaa tttataaact attctcggac atttcagcca ttggcaaagt atcacagaat
      781 ccgagtaaaa tggcatatgc tttactgctt tacatgttcc ccaatttgtt tggagatgac
      841 catagattca ttctttatag aatgtttcca atgagtaaaa tcaaacacaa gatcttctct
      901 cctttcaaac ttaatcttat tagaatatta gtggaagaaa gattctataa taatgaatgc
      961 agatctaata aatggagaat aattggaaca caagttgata aaatgttgat agttgaatct
     1021 gataaatata caatagatgc aaggtatcgc ctaagaccta tatatagaat caagggaaaa
     1081 tctgaagaag ataccctctt catcaaacag atggtagacc aatgtgtgac atcccaggaa
     1141 ttggtggaaa aagtgttgaa gatactgttt agagatttgt tcaagagtgg agaatacaaa
     1201 gcgtacagat acgatgatga cgtagaaaat ggattcattg gattggataa actaaaatta
     1261 aacattgttc atgatatagt tgaaccatgt atgcctgttc gtaggccagt ggctaagata
     1321 ctgtgtaaag aaatggtaaa taaatacttt gagaatccgc tgcatattat tggtaagaat
     1381 cttcaagagt gcattgactt tgttagtgaa taggcatttc atctttctcc aatactaatt
     1441 caaattgtta aattaataat ggatatagta taaatagtta ttagaataag agtgtagtat
     1501 catagataag tatttacttt cttctataaa atggatttta ttcgtagaaa gtatcttata
//