From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Hepatitis C virus gene for envelope and core protein, partial
Date: 15 Sep 92 10:04:35 GMT
Distribution: bionet
Checksum: 14276     4

LOCUS       HPCENCR      1536 bp ss-RNA             VRL       15-SEP-1992
DEFINITION  Hepatitis C virus gene for envelope and core protein, partial
            sequence.
ACCESSION   D11443
KEYWORDS    core protein; envelope protein.
SOURCE      Hepatitis C virus from patient S.T. cDNA to genomic RNA, clone
            pMHCZ1.
  ORGANISM  Hepatitis C virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Togaviridae incertae sedis.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Chayama,K., Tsubota,A. and Arase,Y.
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
COMMENT     Data kindly submitted in computer readable form by:
            Kazuaki Chayama
            Department of Gastroenteroloty
            Toranomon Hospital
            2-2-2 Toranomon
            Minato-ku
            Tokyo 105
            Japan
            Phone:  044-877-5111
            Fax:    044-877-5333
FEATURES             Location/Qualifiers
     CDS             280..>1536
                     /product="polyprotein precursor"
                     /codon_start=1
                     /translation="MSTLPKPQRQTKRNTLRRPQNVKFPGGGQIVGGVYVLPRRGPRL
                     GVRAVRKTSERSQPRKQRHLIPKARSREGRSWAQPGYPWPLYGNKGCGLAGWLLSPRG
                     SRPSWGPNDPRRRSRNFGKVIDTLTCGFADLMGYIPLVGAPVGGVARALAHGVRALGD
                     GVNYATGNLPGCSFSIFLLALFSCLTCPASGLEYTNTSGLYVLTNDCSNGSIVYEAED
                     VILHLPGCVPCVTTGNQSSCWTTVSTTVAVRTLGVTTASIRTHVDMLVGARQLCSALY
                     VGDAFGAVFLVGQAFTFRPRRHTTVQTCNCSIYPGHVSGHRMAWDMMMNWSPTIGLVI
                     SHLMRLPQTLFDLVSGTHWGVMAGLAYFSMQGNWAKVVIVLIMFSGVDANTYTTAGSM
                     AQSIYRLTDIFSTGPSQKLQLVNSNGS"
     mat_peptide     280..849
                     /product="core protein"
                     /codon_start=1
     mat_peptide     850..>1536
                     /product="envelope protein"
                     /codon_start=1
BASE COUNT      302 a    447 c    440 g    347 t
ORIGIN      Map position 51-1586 (nucleotide number).
        1 ttcacgcgga aagcgtctag ccatggcgtt agtacgagtg tcgtgcagcc tccaggcccc
       61 cccctcccgg gagagccata gtggtctgcg gaaccggtga gtacaccgga atcgccggga
      121 tgaccgggtc ctttcttgga acaacccgct caatgcccgg aaatttgggc gtgcccccgc
      181 gagatcacta gccgagtagt gttgggtcgc gaaaggcctt gtggtactgc ctgatagggt
      241 gcttgcgagt gccccgggag gtctcgtaga ccgtgcaaca tgagcacact tcctaaacct
      301 caaagacaaa ccaaaagaaa cacactccgt cgcccacaga acgttaagtt cccgggcggc
      361 ggacagatcg ttggtggagt atatgtgctg ccgcgtaggg gcccacgatt gggtgtgcgc
      421 gcagtacgta agacttccga gcggtcgcag cctcgcaaac agcgtcacct tatccccaag
      481 gctcgctcgc gcgagggccg gtcctgggct cagcccgggt acccttggcc cctctacggg
      541 aataagggct gtgggttggc aggatggctc ttgtcccccc gtggttctcg ccctagttgg
      601 ggcccaaatg acccccggcg tagatcccgc aactttggta aggtcatcga taccctaacg
      661 tgtggattcg ccgacctcat ggggtacatt ccgctcgtcg gcgcccctgt ggggggcgtc
      721 gcaagagccc tcgctcatgg tgtgagggca cttggggacg gagtgaacta tgcaacaggg
      781 aatcttcctg gttgctcctt ttctattttc ctcctcgctc tcttctcctg cttgacttgc
      841 cccgcgtctg gcttagagta cacgaacacg tctggcctat atgtgcttac caacgactgc
      901 tctaatggga gcattgtgta cgaggccgaa gatgtgatct tgcacttacc cggatgcgtg
      961 ccctgcgtca caaccggcaa ccaatcatca tgctggacaa cggtctcaac gacggtggcc
     1021 gttaggaccc ttggcgtgac caccgcgtcg atccgaaccc atgtggatat gctggtaggc
     1081 gcacgacaac tgtgttcggc gctgtacgtc ggggacgctt tcggggctgt gtttcttgtg
     1141 ggacaagcgt tcaccttcag acctcgccgc cacacgaccg tgcagacgtg caactgctcg
     1201 atatacccag gccatgtttc aggacatcgt atggcgtggg atatgatgat gaactggtcc
     1261 cccacaatcg ggctagtgat atcacatctg atgcggttgc cccaaaccct ctttgacttg
     1321 gtctcgggga ctcattgggg tgtgatggca ggtctcgcct acttttccat gcaaggcaat
     1381 tgggccaagg tcgtcatcgt gctgatcatg ttttcaggag tagatgcgaa cacatacacc
     1441 accgctggtt ctatggctca atccatttac cgcctcacgg acatcttcag cacaggtccg
     1501 agtcagaaat tgcaattggt caactcaaat gggtca
//