From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.pseudotsugata multicapsid nuclear polyhedrosis virus (OpMNPV)
Date: 5 Jan 93 06:48:24 GMT
Distribution: bionet
Checksum: 61332 13

LOCUS       NPOCAPA      6556 bp ds-DNA             VRL       05-JAN-1993
DEFINITION  O.pseudotsugata multicapsid nuclear polyhedrosis virus (OpMNPV)
            ORFs.
ACCESSION   D13959 D00514
KEYWORDS    .
SOURCE      O.pseudotsugata multicapsid nuclear polyhedrosis virus DNA
  ORGANISM  Orgyia pseudotsugata nuclear polyhedrosis virus
            Viridae; ds-DNA enveloped viruses; Baculoviridae; Baculovirus;
            Nuclear polyhedrosis viruses.
REFERENCE   1  (bases 1 to 6556)
  AUTHORS   Russell,R.L. and Rohrmann,G.F.
  TITLE     The p6.5 gene region of a nuclear polyhedrosis virus of Orgyia
            pseudotsugata: DNA sequence and transcriptional analysis of four
            late genes
  JOURNAL   J. Gen. Virol. 71, 551-560 (1990)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Muller,R., Pearson,M., Russell,R.L. and Rohrmann,G.F.
  TITLE     A capsid-associated protein of the multicapsid nuclear polyhedrosis
            virus of Orgyia pseudotsugata: Genetic location, sequence,
            transcriptional mapping, and immnocytochemical characterization
  JOURNAL   Virology 176, 133-144 (1990)
  STANDARD  full automatic
COMMENT     Submitted (22-NOV-1989) to DDBJ by: George F. Rohrmann Department
            of Agricultural Chemistry Oregon State University Corvallis, OR
            97331 U.S.A. Phone:  503-737-3791 Fax:    503-737-0497.
FEATURES             Location/Qualifiers
     polyA_signal    complement(204..209)
     mRNA            3183..5283
                     /note="mRNA for p87 (alt.)"
     mRNA            3210..5283
                     /note="mRNA for p87 (alt.)"
     polyA_signal    5195..5200
     CDS             2..379
                     /partial
                     /product="ORF"
                     /codon_start=1
                     /translation="SFVENLNCKLFDIKPPKFKKEPFDSILSKYSLNYKALCFKKKEK
                     CTVGCVTKRQKKMKRRQLLSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVE
                     RQTRAGDEMVSFIRYCELCQMRA"
     CDS             complement(376..531)
                     /product="ORF"
                     /codon_start=1
                     /translation="MVYRRRRSRSADGTYTRRRRSSGYRRRPGRPRTYRRSRSATRRS
                     GYRRRRY"
     CDS             complement(568..1632)
                     /product="ORF"
                     /codon_start=1
                     /translation="MSVIDVHIRIDSLRRLIDENMQMEIWPQLLRMCSDTVSDVDVDT
                     SALMAFLVTVARKSQTAFANANAATASAFAAGGARAPAAMPAPAPPAQTVFGALVSAP
                     SAEPALVDMRRYRAAARRLIQYYSLNTTTSSEFKVRDVVMTMIFLQRSENYHQLFKLL
                     DTAMDDFTCRPQLTEAQVSTLLHTLRTLLEMPTTPIDMTTVDVMRSSFARCFASPVLR
                     YAKVVLLQGETVSRDERTTLEELLVERGDNIQKLQPQQYVASGSEIPFCDDPEFINRL
                     LKHLDPYPLSRMYYNAANSMFYTTMENYAVANCKFNIEDYNRIFKGAESIKKHANKTA
                     EDSDELDIYLGTTAKRKKII"
     CDS             complement(1642..1980)
                     /product="ORF"
                     /codon_start=1
                     /translation="MIASIGDSAEPPLRRTRRAQQQDRPPTQLAAAEMLHNMNGAETA
                     ASFIVKDASENKIASLTTLGNQSIAARKLVESLQAGAPTIKLNREDTVNVLKFLNDVY
                     TNQLEVVNIS"
     CDS             complement(1958..3193)
                     /product="ORF"
                     /codon_start=1
                     /translation="MHTYKLLYNLRFNAVHGLEHRFEHVRFEAQMHQREIDSLTFLTA
                     KYFDQHSLIDIKGLTFFTEFNKCIVAIKAKFEAQPDSENLHGIKSIMGMFLRDEFIKQ
                     VPHFKTIMEYLKTYYNPIAVPDVRAFMCDEQCRPGGKISCLTCKCNYLSAALTTLDSG
                     LQDGWDIFLRPMFGMPLLIYVISKTDFSSQPDVVNENNLMTQMFVQFFYNLLCDKAYS
                     MHTKQKACEPLVKDCKRVITLLSAKDRHRLLTMLNEQCNSASTAANAPKLLMPFKNFM
                     IKMGQHTKIKKVNKIAATVLIGFFLRQYIESMPSHYLQNLRGLLKDEHNDSRDEGCSA
                     AELEMLNVCRYIFKRYSDKDVAVVVEKLKKITVEIMNVLIFEKIVPETFIRRIIVDYQ
                     LDNEISLLLDLNHDCFDRR"
     CDS             3217..5091
                     /product="p87 capsid protein"
                     /codon_start=1
                     /translation="MDEQHSLRIAALAGEILTRDRAQVNTIIHSPERALGQKLDAITA
                     LVDSMQPGTPRDAAVNEAANVTAQSPMSETQDPQRANDNVSDTVANENAQNLLLEGQD
                     RVLRHRVLQIAVTFLQRNKRVKANATTLAQIEEALRNYETAKNSGASDSVIDGFLERA
                     ESLFNTLKNISLSELLDRESAVFADTESAPRTQTADNSPPPVSEQDFDRLDISQLTDY
                     IENNYRDQFDFDKHNSVEDVRNFAKNLWRNKTRVTSTPLQEYQMPPQTPAPLQDQMPP
                     QTPAYATPAQQPSQPTPAQTPAQQPSQPTPAYVTSAQTPAQQPSQPTPVSNYSWERRV
                     ASMFANTDLPQNVPLPDSYDTSSVIGQKRRKRRAPPLPPYSSDEEDAAPPRSPKRKES
                     LSSSEEDEFDYEREQKRRREEDKNFLRLKALELSKYAGVNERMEKIVRVTKAMQQTYD
                     YCNCKNTISGTPAAASFINLLRRLNTYNLSHVEMTVNFYELLYPLTLYNDESNRIVGY
                     IFAATNYFQNCAKNFGRMRAEFNEHGPFAQIDSLVMFVIKFNFLCDLQTFFGKIDGLP
                     MLAQPNIKTHTVLVMRDKIVKLAFGALQYDTSLKTDNRRDPKHLQRLIQLMNADFNIM
                     "
BASE COUNT     1568 a   1800 c   1733 g   1455 t
ORIGIN      66-72 genome % units.
        1 aagctttgtc gagaacctga actgcaagct gttcgacata aaaccgccaa agtttaaaaa
       61 ggagccgttc gattccattt tgtccaaata ctcgctaaac tacaaggcgc tgtgcttcaa
      121 aaaaaaggaa aagtgcacag tcgggtgcgt taccaagcgg cagaaaaaaa tgaaacggcg
      181 gcaattgtta agcgatagag tcatttattt gcacaacaaa aacgacgtct tggacgaacg
      241 cacgttgcta cacggtccga gcggaacgag ccttgcgccc tgccttcata ggtacgccac
      301 tgttgagcgg caaacgcgcg ccggcgacga aatggtttcc tttatccgat actgcgagct
      361 ctgccagatg cgcgcctagt agcggcgcct gcggtacccg gagcggcgag tggcggagcg
      421 gctgcgccgg taggtgcgcg gcctgccggg gcggcgtcgg tagccggagc ttcggcggcg
      481 gcgcgtatag gtgccatcgg cggatcggga gcggcggcgg cggtagacca tgatgcgcgt
      541 gttgtcgatg tagctttagt ttttacctta tattattttc ttgcgcttgg cggtcgtgcc
      601 caaataaatg tccagctcat cactgtcctc ggccgtttta tttgcgtgct ttttgatgct
      661 ctcggcacct ttgaaaattc tattgtagtc ctcgatgttg aacttgcaat tggccaccgc
      721 gtagttttcc atggtggtgt aaaacatgga gttggccgcg ttgtaataca ttctggatag
      781 cgggtacggg tccaggtgct tcaacaacct gttgataaac tcggggtcgt cgcaaaacgg
      841 aatctcgctg ccgctcgcaa cgtactgctg cggctgcaac ttttggatgt tgtcgccgcg
      901 ctccaccagc agctcctcca acgtggtgcg ctcatcgcgg ctcaccgtct cgccctgcag
      961 cagcacaacc ttggcgtagc gcagcacggg gctggcgaag caacgcgcga acgaactgcg
     1021 catcacatcc accgtggtca tgtcaattgg agtggtgggc atttccagca gcgtgcgcaa
     1081 cgtgtgcaac aacgtgctaa cttgcgcctc cgtcaactgc gggcggcacg taaaatcgtc
     1141 catcgcggtg tccaacagtt tgaacaactg atggtagttt tccgaacgct gcaaaaatat
     1201 catggtcatc accacgtcgc gcaccttgaa ctcgctcgac gtggtggtgt tgagcgagta
     1261 gtactggatg agccgacggg ccgccgcgcg gtagcgccgc atgtcgacga gcgcgggttc
     1321 cgcgctcggc gcggacacga gcgccccgaa cacggtttgc gcgggcggcg cgggcgcggg
     1381 cattgccgcg ggcgctctcg ccccgcccgc cgcgaacgcc gacgccgtgg cggcgttcgc
     1441 gttggcaaac gccgtttgcg atttgcgcgc caccgtaacc aaaaaggcca ttaacgcgga
     1501 cgtgtccaca tccacgtcgg acaccgtgtc gctgcacatg cgcagcagct gcggccaaat
     1561 ttccatctgc atgttttcgt ctattagacg gcgcaagctg tctatgcgga tgtgcacgtc
     1621 aatcacgctc atggcggcgg cttatgagat gttgaccacc tccagctggt tggtgtacac
     1681 gtcgttcaaa aatttcaaca cgttcaccgt gtcctcgcga tttagcttaa ttgtgggcgc
     1741 gccggcctgc agcgactcga ccagcttgcg cgccgcgatc gactggttgc ccagcgtggt
     1801 caaactggca attttgtttt cggaggcgtc tttgacgatg aacgacgccg ccgtttctgc
     1861 gccgttcatg ttgtgaagca tttccgcggc ggccagctgc gtgggcggcc gatcctgctg
     1921 ttgtgcacgg cgagttcgcc gcagcggcgg ctctgcgcta tcgcctatcg aagcaatcat
     1981 ggttcagatc gaggagcaac gaaatctcgt tgtccagttg gtagtcgaca atgatgcgcc
     2041 ttataaacgt ttcgggcacg attttctcga aaatcaacac gttcattatt tccacggtaa
     2101 tctttttgag cttttccaca acgaccgcca cgtccttgtc cgagtagcgt ttgaatatgt
     2161 aacggcacac gttgagcatt tccagctcgg cggcggagca cccttcgtcg cgcgagtcgt
     2221 tgtgttcgtc tttcaaaagc ccgcgcaggt tttgcaagta atggctgggc atgctctcga
     2281 tgtattggcg cagaaagaaa cctatcaaca cggtggccgc gattttgttt acttttttga
     2341 ttttggtgtg ctggcccatt ttgatcataa agttcttgaa gggcattagc agctttggcg
     2401 cgttggctgc cgtggaggca ctgttgcatt gctcgttgag catcgttagt agtcggtgac
     2461 ggtctttggc tgacaaaagc gtgattacgc gtttacaatc tttaacaagc ggctcgcacg
     2521 ctttttgttt agtgtgcatc gaatatgctt tgtcgcacag caaattgtag aaaaactgca
     2581 caaacatttg cgtcattaag ttgttttcgt tgacgacgtc tggctgcgag gaaaaatcgg
     2641 ttttagagat gacgtaaatc agcagcggca tgccgaacat gggccgcaaa aaaatgtccc
     2701 agccgtcttg aagccccgaa tcgagcgtgg tcagggcggc cgacaaatag ttgcacttgc
     2761 acgttaggca cgaaattttg ccgcccggcc gacactgctc gtcgcacatg aaggcgcgca
     2821 cgtcgggcac cgctataggg ttgtaatatg tttttaagta ctccatgatg gttttaaaat
     2881 gaggaacttg tttgatgaac tcgtcgcgca aaaacatgcc cataatgctt ttgatgccgt
     2941 gtaggttttc cgaatcgggc tgcgcctcga acttggcctt gatcgcaact atgcatttat
     3001 tgaattctgt aaaaaaggtt aggcccttta tgtcaatcaa actgtgctgg tcaaagtact
     3061 tggccgtcaa aaaggttagc gagtcgattt cgcgttggtg catttgcgct tcaaagcgca
     3121 cgtgttcaaa gcggtgctcc agaccgtgca ccgcgttgaa cctcaaattg tacaacaatt
     3181 tgtaagtgtg catgttgcat tcgatatagc cttataatgg acgagcagca ttcattacgc
     3241 attgccgcgc tggctggcga gatcttgacg cgcgaccgcg cacaggtgaa cacaatcata
     3301 cacagccccg agcgcgcgct gggccaaaaa ttggacgcca ttacggcgct agtcgattca
     3361 atgcagcccg gcacgccgcg cgacgctgct gtgaacgaag ccgcaaacgt taccgcgcaa
     3421 agcccaatgt cggaaactca agacccgcag cgcgccaacg acaacgtgtc agataccgtt
     3481 gcaaatgaaa acgcgcaaaa cttgttgttg gagggccaag accgcgtttt gcgacatcgc
     3541 gttttgcaaa tcgcggtaac gtttttgcag cgcaacaagc gagtaaaagc gaacgcgacc
     3601 acgttggccc agattgagga agcgctccga aactatgaaa ctgcaaaaaa cagcggcgca
     3661 agcgacagtg taatcgacgg gtttcttgaa cgtgccgaat ctttgtttaa caccctaaaa
     3721 aacatatcgc tatccgagct gttggaccgc gaaagcgcag tgtttgcgga cacggaaagc
     3781 gctccgcgga cgcaaaccgc ggacaactcg ccgccacctg tgagcgaaca agactttgac
     3841 cggttggaca ttagccagct caccgattac atcgagaaca attacaggga tcagtttgat
     3901 ttcgacaaac acaacagtgt ggaagacgtg cgcaactttg caaaaaatct ttggcgcaac
     3961 aaaacgcgtg tcacgtccac gcctctgcag gaataccaga tgccaccgca aacgcccgcg
     4021 cctctgcaag accaaatgcc accgcaaacg cccgcgtacg cgacgcccgc gcagcagcca
     4081 agccagccaa cgcccgcgca aacgcccgcg cagcagccaa gccagccaac gcccgcgtac
     4141 gttacgtctg cgcaaacgcc cgcgcagcag ccaagccagc caacgcccgt ttccaattac
     4201 agttgggaaa ggcgcgtcgc gtcaatgttt gcgaatacag atttaccaca aaacgtgccg
     4261 ctgcccgaca gctacgacac ctcgtccgtc attgggcaaa aacggcgcaa gcggcgcgcg
     4321 ccgccgctgc cgccgtactc gtcagacgaa gaagacgccg ccccgccacg ttcgccaaaa
     4381 cgcaaagagt cgctttcctc gtctgaagaa gacgaatttg actacgagcg cgaacaaaaa
     4441 cgccggcgcg aggaggataa aaactttttg cgcctaaagg cgttggaact gtccaagtac
     4501 gccggcgtta acgagcgcat ggaaaagatt gtgcgcgtta ccaaggcgat gcaacaaacg
     4561 tacgactact gcaattgcaa aaacacaatc agcggcacgc ccgccgcggc gtcgtttatt
     4621 aacttgttgc ggcggctgaa cacctacaac ctcagccacg tggaaatgac ggtcaacttt
     4681 tacgagctct tgtaccccct cacgctgtac aacgacgagt ccaaccgcat tgttggctac
     4741 atattcgcgg cgaccaacta ttttcaaaat tgcgccaaaa actttgggcg catgcgcgcc
     4801 gagtttaacg agcacggccc gtttgcgcaa attgattcgc tcgtcatgtt tgtcatcaaa
     4861 ttcaactttt tgtgcgactt gcaaacgttt tttggaaaaa ttgacggctt gccaatgttg
     4921 gcccagccca acatcaagac gcacaccgtg ctggtgatgc gcgacaagat cgtcaagctg
     4981 gcctttggcg cgctgcaata cgacaccagt ctgaaaacgg acaatcggcg ggaccccaaa
     5041 cacctgcaac gactcatcca gttgatgaac gccgatttta acataatgta aacaaatgtg
     5101 ttagcaattt atttattaca aacagagtta cgatattcgg tgtacatggt tttataatct
     5161 ttgtgatcaa agttaaaacg ttttctatac aaataataaa gcttgttaaa cagctgtttt
     5221 cgtttttttt tgtgtcgcaa acaaattttt tgtggcaatg gcgtagcaca tctagaaaat
     5281 taaatttttc gccgaccgca cactcttcat taagctcgtt acggctggcc gcctatgcga
     5341 taactgcacg tgacacacag ggtgtagtgg ccgcatggcg ccgccaccat gcgcttcggc
     5401 tcgctcatgc aaacaatgca ctcgtcgttg gcttcgtcgg taaacacgcg ctcaacagta
     5461 attttacaaa cggtaacggc gtctggtttt atgtaataat agcatttgga gcggcaaatt
     5521 aaggaactgt ctttgggcgc cacggcaaaa gtggcgccct cgcgccgcaa ccgcttggga
     5581 aaggtgcagt tggcgtcgcg ccgataggcg ggatcgtcta tacgcacgcg cagcctgccg
     5641 ttcaccttta cacaaatcaa cttaacgtgc gccattgcac ggtcgaatgt aggaccagtg
     5701 tcaattattt aagacaccgt tagcataacc gctggcccaa tggacgccaa atacaaggtg
     5761 gtcgacgtgg acacctttgc ccgccagcta atcacggaca agtgcagcga gctgattgaa
     5821 accgaaaatc tattgcctgc aaacattttg catgttgtta aacaagcaag agacaaatac
     5881 tttgaagacc cctcggtcaa aaactacgaa tatgtcaaaa acctgttttt gcgcacaaaa
     5941 tacatggacg actcaattga ctacaaaaat tttaatcggc gcgtgttgct gattgtgttc
     6001 aaatttgcgc tcaaccgagg ctccggctac tttccctcgt acagggagct cattgaagtg
     6061 gccgtcaagc gcctcaacaa aatcaacccc gacctcaaga gctcgccgcg cgccatgttg
     6121 cagcactaca acgagtgcct ggaaaacctg gacaacccgg tgaccgacga gcaccacctg
     6181 ttaacgtttg gaaaagaagt ggccaccaaa atgtttatcg aggcgttcga gtttagctac
     6241 gccagcaaca acgaaatcaa cttaactacc aacaagcgcg gctcggacct gttcgacccg
     6301 ataccgatgc ccgcgcccgc gcccgcgcct tcggcgtctt tgttggacaa cgtcatgaac
     6361 gagcgcaagc gcaagttgca ggcgtcggtc acgacaacgc cgcccaaacg atgcaaattg
     6421 gccgaccggc cggcgcagac cacacaagac acgccgcgcg cgccgcaacc ggcgcctgtg
     6481 cgcgcgcagc ggcccctgtt tacgctgtag acgcgcgcgc agaggcgtcg gtgggcggcg
     6541 cgtaatttcg ctgcag
//