HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Gecko gecko thrombin mRNA, 3' end.
Date: 7 Apr 92 10:01:48 GMT
Distribution: bionet
Checksum: 18265     3

LOCUS       GECTHRO       929 bp ss-mRNA            VRT       07-APR-1992
DEFINITION  Gecko gecko thrombin mRNA, 3' end.
ACCESSION   M81392
KEYWORDS    thrombin.
SOURCE      Gecko gecko Adult Liver cDNA to mRNA.
  ORGANISM  Gecko gecko
            Eukaryota; Animalia; Chordata; Vertebrata; Reptilia; Lepidosauria;
            Squamata; Sauria; Gekkota; Gekkonidae.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Banfield,D.K. and MacGillivray,R.T.
  TITLE     Partial characterization of vertebrate prothrombin cDNAs:
            Amplification and sequence analysis of the B chain of thrombin from
            nine different species
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 2779-2783 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     CDS             <1..708
                     /product="thrombin"
                     /gene="thrombin"
                     /codon_start=1
                     /translation="QDLLCGASLISDRWILTAAHCIFYPPWDKNFTADDLVVRIGKHN
                     RRIHEKTREKIALLDKIIIHPKYNWKENLDRDIALLRLRKPVPFSDYIQPVCLPTKET
                     VQSLLLTGYKGRVTGWGNLFETWGSSTPALPTYLQLVNLPIVDRDTCKASTKIKITDN
                     MFCAGYSPEDSKRGDACEGDSGGPFVMKNPQDNRWYQVGIVSWGEGCDRDGKYGFYTH
                     VFRLKKWLKKTVEKHGN"
     3'UTR           706..929
                     /gene="thrombin"
BASE COUNT      289 a    198 c    218 g    224 t
ORIGIN
        1 caagacttgc tgtgtggtgc cagcctcatc agtgatcgct ggatcctgac tgctgctcac
       61 tgtatcttct acccaccctg ggataagaac ttcacggcag atgaccttgt tgtgcgaatt
      121 ggcaaacata acagaagaat acatgagaag accagggaaa aaattgcctt gctggacaaa
      181 atcatcatcc atcccaaata taactggaag gagaatctag atcgggatat tgcactgttg
      241 cgcttgagga aacctgttcc tttcagtgac tacatccagc cagtctgttt gcccaccaaa
      301 gaaactgtgc aaagcctgct gttgacaggg tacaaaggac gtgtgactgg ctggggaaac
      361 ctttttgaaa cctggggttc tagcactcct gccctaccca catatttgca gttggtgaac
      421 ctccccatcg tagatcgaga cacctgtaag gcatcaacca aaattaaaat cacagacaat
      481 atgttctgtg cagggtacag tcctgaagac tcaaagagag gggatgcttg tgaaggtgac
      541 agcgggggcc catttgtcat gaagaaccca caagataaca ggtggtatca ggtgggtatc
      601 gtctcatggg gagaaggctg tgatcgtgac ggtaaatatg gattctatac ccatgtgttc
      661 cgtctgaaga agtggttgaa aaagactgta gagaaacatg ggaattaaag gaattgtatc
      721 tcaacctaca gcccagattt gaaaagtatg tctacaaagc aaacattaca gtaccaaaaa
      781 gctaagagaa gctttaaaag ccaaactcca ataaagcttc tgcaccaaga atcaactctg
      841 gtaccaggac caagaactga acttgtgtaa atgaacatta ctaataaatt tgtcatggtg
      901 gttctgttgc caagtaaaca tgttgggtc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human lymphocyte antigen (DRw8) mRNA.
Date: 10 Apr 92 10:06:08 GMT
Distribution: bionet
Checksum: 48773     2

LOCUS       HUMHLADRWB    834 bp ss-mRNA            PRI       10-APR-1992
DEFINITION  Human lymphocyte antigen (DRw8) mRNA.
ACCESSION   M27015
KEYWORDS    beta-chain; lymphocyte antigen.
SOURCE      Homo sapiens cDNA to mRNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Gorski,J.
  TITLE     the hla-drw8 lineage was generated by a deletion in the dr b region
            followed by first domain diversification
  JOURNAL   J. Immunol. 142, 4041-4045 (1989)
  STANDARD  full staff_entry
BASE COUNT      181 a    222 c    235 g    196 t
ORIGIN
        1 cacgtttctt ggagtactct acgggtgagt gttatttctt caatgggacg gagcgggtgc
       61 ggttcctgga cagatacttc tataaccaag aggagtacgt gcgcttcgac agcgacgtgg
      121 gggagtaccg ggcggtgacg gagctggggc ggcctgatgc cgagtactgg aacagccaga
      181 aggacttcct ggaagacagg cgggccctgg tggacaccta ctgcagacac aactacgggg
      241 ttggtgagag cttcacagtg cagcggcgaa gtccatccta aggtgactgt gtatccttca
      301 aagacccagc ccctgcagca ccacaacctc ctggtctgtt ctgtgagtgg tttctatcca
      361 ggcagcattg aagtcaggtg gttccggaat ggccaggaag agaagactgg ggtggtgtcc
      421 acaggcctga tccacaatgg agactggacc ttccagaccc tggtgatgct ggaaacagtt
      481 cctcggagtg gagaggttta cacctgccaa gtggagcacc caagcgtgac aagccctctc
      541 acagtggaat ggatgaagtg cagatgacaa tttaaggaag aatcttcttc ccccagcttt
      601 gcaggatgaa aagctttccc gcctggctgt tattcttcca cgagagaggg ctttctcagg
      661 acctagttgc tactctggtt cagcaactgc agaaaatgtc ctcccttgtg gcttcctcag
      721 ttcctgccct tggcctgaag tcccagcatt gatggcagcg cctcatcttc aacttttgtg
      781 ctcccctttg cctaaaccct atggcctcct gtgcatctgt actcaccctg tacc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Aspergillus niger (strain NRRL 322) PX21 gene, promoter sequence.
Date: 7 Apr 92 10:01:30 GMT
Distribution: bionet
Checksum: 48831     2

LOCUS       ASNPX21PRO    234 bp ds-DNA             PLN       07-APR-1992
DEFINITION  Aspergillus niger (strain NRRL 322) PX21 gene, promoter sequence.
ACCESSION   M90699
KEYWORDS    .
SOURCE      Aspergillus niger (strain NRRL 322) (library: genomic,
            hph-Expression) DNA.
  ORGANISM  Aspergillus niger
            Eukaryota; Fungi; Eumycota; Ascomycotina; Plectomycetes;
            Eurotiales; Trichocomaceae.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   Luo,X., Khanh,N.Q. and Wientjes,F.-J.
  TITLE     Cloning and sequencing of three Aspergillus niger promoters
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     promoter        1..234
                     /gene="PX21"
                     /evidence=EXPERIMENTAL
     misc_feature    30..44
                     /note="CT-motiv"
                     /gene="PX21"
     misc_feature    127..137
                     /note="CT-motiv"
                     /gene="PX21"
BASE COUNT       82 a     46 c     29 g     77 t
ORIGIN
        1 ctatatttaa ctttaactat aactatatat ttacctacta ttttataaca aataattatt
       61 aaattaaaaa tatatttagt accctcgcgt gcgtgctaac tgcacgcgcg cgaagtaatt
      121 aaatagtccc ctcgcgcgca gtaagcgtgc gcgcgcgacg aattattact atttaacctc
      181 tattaagcta taagttaata aacatttgaa cttctaacca ttaatcaaat atag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.sativa random single-copy DNA fragment 11RG118F
Date: 10 Apr 92 10:12:20 GMT
Distribution: bionet
Checksum: 38800     2

LOCUS       RIC11RG11F    122 bp ds-DNA             PLN       10-APR-1992
DEFINITION  O.sativa random single-copy DNA fragment 11RG118F
ACCESSION   X57914
KEYWORDS    PCR amplified.
SOURCE      Oryza sativa DNA.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 122)
  AUTHORS   Williams,M.N., Pande,N., Nair,S., Mohan,M. and Bennett,J.E.
  TITLE     Restriction fragment length polymorphism analysis of polymerase
            chain reaction amplified from mapped loci of rice (oryza
            sativa)genomic DNA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=IR 36; *source: sub_strain=indica;
            Entry x57860-x57923 consist of random single-copy DNA fragments,
            which were isolated and mapped to the twelve haploid chromosomes of
            the rice. Apart from their map location, copy number and DNA
            sequence, very little is known about these loci. Names are encoded
            as follows: 01 RG140 F (chromosome, clone, 'F'orward or 'R'everse
            primer)
            By mistake entry x57866-x57899 are mentioned in Gene 107, 229-240.
            From EMBL    entry OS11RG11F;  dated 25-MAR-1992.
BASE COUNT       38 a     19 c     40 g     25 t
ORIGIN
        1 tgcagcagtg caatgtcaac ttaaagaggg ttagggggcg gcaagagata aggggataaa
       61 agattacagt tttaaggtag ttagcagctg ccgtcacatg gggtgacaca cagtgtcacg
      121 ga
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPBD3, V3
Date: 7 Apr 92 10:02:44 GMT
Distribution: bionet
Checksum: 60425     3

LOCUS       HIVFLPBD3     343 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPBD3, V3
            region.
ACCESSION   M90873
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone DA3 of DNA
            ID 5592.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 13 clone sequences over the V3
            region obtained by the CDC from patient "B" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>343
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEIVIRSANFTDNAKIIIVQLNASVEINCTRPDNNTRKGIH
                     IGPGRAFYATGEIIGDIRQAHCNISGAKWNNTIEQVKTKLREQFGNKTIIFNHSSGGD
                     PEIVMHSFNCGG"
BASE COUNT      146 a     48 c     72 g     77 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagagatagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacagc tgaatgcatc tgtagaaatt aattgtacaa gacccgacaa caatacaaga
      121 aaaggtatac atataggacc agggagggca ttttatgcaa caggagaaat aataggagat
      181 ataagacaag cacattgtaa cattagtgga gcaaaatgga ataatactat agaacaggta
      241 aagacaaaat taagagaaca atttgggaat aaaacaataa tctttaatca ctcctcagga
      301 ggggacccag aaattgtaat gcacagtttt aattgtggag ggg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: N.sylvestris mRNA for 6P229 polypeptide homologous to animal
Date: 10 Apr 92 10:13:50 GMT
Distribution: bionet
Checksum: 19703     3

LOCUS       TOB6P229      816 bp ss-mRNA            PLN       10-APR-1992
DEFINITION  N.sylvestris mRNA for 6P229 polypeptide homologous to animal
            glutathione peroxidases
ACCESSION   X60219
KEYWORDS    glutathione peroxidase homologue.
SOURCE      Nicotiana sylvestris RNA.
  ORGANISM  Nicotiana sylvestris
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
            Asteridae; Solanales; Solanaceae.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Criqui,M.C., Jamet,E., Parmentier,Y., Marbach,J., Durr,A. and
            Fleck,J.
  TITLE     Isolation and Characterization of a plant cDNA showing homologies
            to animal glutathione peroxidases
  JOURNAL   Plant Mol. Biol. 18, 623-627 (1992)
  STANDARD  full automatic
COMMENT     *source: clone=6P229;
            From EMBL    entry NS6P229;  dated 19-MAR-1992.
FEATURES             Location/Qualifiers
     CDS             154..663
                     /note="homologous to animal glutathioneperoxidases"
                     /translation="MASQSSKPQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCG
                     LTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFD
                     KVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEK
                     DIKKLLGVA"
     polyA_signal    700..706
     polyA_signal    724..728
BASE COUNT      234 a    156 c    164 g    262 t
ORIGIN
        1 aaaaatctca atttccttag gcaattttct tccattctaa agccaaccca tttcaattct
       61 gtatctattc agccgatcca aacagttctt tccaattcta ttgtttcagc taagagattt
      121 gagttgtttt gtttaagatc agattatagt accatggcca gtcaatccag caagcctcaa
      181 tctatttatg acttcactgt caaggatgct aagggtaatg atgttgatct cagcatttac
      241 aagggaaagg tccttattat tgtcaatgtt gcatcacagt gtggtctgac aaattcgaac
      301 tatactgact tgaccgagat atacaagaag tacaaggatc aaggtttgga gattcttgca
      361 ttcccttgca accagttcgg tgggcaggag cctggaagca ttgaagagat ccagaacatg
      421 gtttgcactc gcttcaaggc cgagtaccca atattcgata aggttgatgt gaatggtgat
      481 aatgctgctc cactgtataa gttcttgaaa tcaagcaaag gtgggttctt tggagatagt
      541 atcaagtgga acttctccaa attccttgtt gacaaagaag gaaacgtcgt cgatcgctac
      601 tctccaacca ctactccagc tagcatggag aaggatatca agaaactttt gggtgttgct
      661 taagctctgg attgatctgc atctgcattc ctctactaga aataatgaga gactactata
      721 gtgaataagt tctgtgttga tgtaatttgc ttcttgtttt gccactactt tgttcagttg
      781 cttgtataat ttaagtattg aatacatttc caatga
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.musculus DNA for nuclear lamina (clone 26)
Date: 10 Apr 92 10:09:23 GMT
Distribution: bionet
Checksum: 60303     1

LOCUS       MUSNLAM26     136 bp ds-DNA             ROD       10-APR-1992
DEFINITION  M.musculus DNA for nuclear lamina (clone 26)
ACCESSION   X64514
KEYWORDS    nuclear lamina.
SOURCE      Mus musculus DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 136)
  AUTHORS   Christova,R., Bach,I. and Garcheva-Gargova,Z.
  TITLE     Sequences of DNA fragments contacting the nuclear lamina in vivo
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: clone=26;
            From EMBL    entry MMNLAM26;  dated 20-MAR-1992.
BASE COUNT       34 a     25 c     46 g     31 t
ORIGIN
        1 gatttttaac tgcatgtctt tatttccatc attcaagagg cagaggtgtt tagaactgtg
       61 tctctgtgag atagaggaag gcaggcaggc aggcaggcag gcaggcaggc aggcaggcag
      121 gcaggcctga tctagg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC30, V3 region.
Date: 7 Apr 92 10:04:39 GMT
Distribution: bionet
Checksum: 47348     2

LOCUS       HIVFLQ39      343 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC30, V3 region.
ACCESSION   M90959
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct PCR
            amplification product of Florida control sample C01 of DNA ID 5358.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
FEATURES             Location/Qualifiers
     CDS             <1..>343
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="EIVIRSDNFTDNAKTIIVQLNQTVEINCTRPNNNTRKSIHIGPG
                     RAFYATGGIIGEIRQAHCNLSRVKWENTLEQIAIKLREQFKNKTIVFNQSSGGDPEIV
                     MHSFNCGGEFFY"
BASE COUNT      145 a     48 c     68 g     82 t
ORIGIN      near the C2-V3 boundary
        1 gagatagtaa ttagatctga caatttcacg gacaatgcta aaaccataat agtacagctg
       61 aatcaaactg tagaaattaa ttgtacgaga cccaacaaca atacaagaaa aagtatacat
      121 ataggaccag ggagagcatt ttatgcaaca ggaggaataa taggagagat aagacaagca
      181 cattgtaacc ttagtagagt aaaatgggag aacaccttag aacagatagc tataaaatta
      241 agagaacaat ttaagaataa aacaatagtt tttaatcaat cctcaggagg ggacccagaa
      301 attgtaatgc acagttttaa ttgtggaggg gaatttttct act
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: B.burgdorferi 16S ribosomal RNA.
Date: 9 Apr 92 10:02:16 GMT
Distribution: bionet
Checksum: 60757     3

LOCUS       BORRRDQ      1481 bp ss-rRNA            RNA       09-APR-1992
DEFINITION  B.burgdorferi 16S ribosomal RNA.
ACCESSION   M64309
KEYWORDS    16S ribosomal RNA.
SOURCE      B.burgdorferi (isolate 1352) rRNA.
  ORGANISM  Borrelia burgdorferi
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes;
            Spirochaetales; Spirochaetaceae.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Marconi,R.T. and Garon,C.F.
  TITLE     Phylogenetic analysis of the genus Borrelia: A comparison of North
            American and European isolates of B. burgdorferi
  JOURNAL   J. Bacteriol. 174, 241-244 (1992)
  STANDARD  full staff_entry
BASE COUNT      431 a    269 c    410 g    360 t     11 others
ORIGIN
        1 aataacgaag agtttgatcc tggcttagaa ctaacgctgg cagtgcgtct taagcatgca
       61 agtcaaacgg gatgtagcaa tacattcagt ggcgaacggg tgagtaacgc gtggatgatc
      121 tacctatgag atggggataa ctattagaaa tagtagctaa taccgaataa ggtcagttaa
      181 tttgttaatt gatgaaagga agcctttaan nttcgcttgt agatgagtct gcgtcttatt
      241 agctagttgg tagggtaaat gcctaccaag gcaatgataa gtaaccggcc tganagggtg
      301 aacggtcaca ctggaactga gatacggtcc agactcctac gggaggcagc agctaagaat
      361 cttccgcaat gggcganagc ctgacggagc gacactgcgt gaatgaagaa ggtcgaaaga
      421 ttgtaaaatt cttttataaa tgaggaataa gctttgtagg aaatgacaaa gtgatgacgt
      481 taatttatga ataagccccg gctaattacg tgccagcagc cgcggtaata cgtaaggggc
      541 nagcgttgtt cgggattatt gggcgtaaag ggtgagtagg cggatatata agtctatgca
      601 taaaatacca cagctcaact gtggacctat gttggaaact atatgtctag agtctgatag
      661 aggaagttag aatttctggt gtaagggtgg aatctgttga tatcagaaag aataccggag
      721 gcgaaggcga acttctgggt caagactgac gctgagtcac gaaagcgtag ggagcaaaca
      781 ggattagata ccctggtagt ctacgctgta aacgatgcac acttggtgtt aactaaaagg
      841 ttagtaccga agctaacgtg ttaagtgtgc cgcctgggga gtatgctcgc aagagtgaaa
      901 ctcaaaggaa ttgacggggg cccgcacaag cggtggagca tgtggtttaa ttcgatnnta
      961 cgcgaggaac cttaccaggg cttgacatat ataggatata gttagagata attattcccc
     1021 gtttggggtc tatatacagg tgctgcatgg ttgtcgtcag ctcgtgctgt gaggtgttgg
     1081 gttaagtccc gcaacgagcg caacccttgt tatctgttac cagcatgtaa tggtggggac
     1141 tcagataaga ctgccggtga taagtcggag gaaggtgagg atgacgtcaa atcatcatgg
     1201 cccttatgtc ctgggctaca cacgtgctac aatggcctgt acaaagcgaa gcgaaacagt
     1261 gatgtgaagc aaaacgcata aagcaggtct cagtccggat tgaagtctga aactcgactt
     1321 catgaagttg gaatcgctag taatcgtata tcagaatgat acggtgaata cgttctcggg
     1381 ccttgtacac accgcccgtc acaccacccg agttnngnna tcccgaagct attattctaa
     1441 cccgtaaggg aggaaggtat ttaaggtatg tttagtcacg g
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC21, V3 region.
Date: 7 Apr 92 10:04:21 GMT
Distribution: bionet
Checksum: 58955     2

LOCUS       HIVFLQ30      289 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC21, V3 region.
ACCESSION   M90950
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct PCR
            amplification product of Florida control sample C01 of DNA ID 5262.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
FEATURES             Location/Qualifiers
     CDS             <1..>289
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="EVVIRSENISDNAKTIIVQLNESVVINCTRPNNNTRRSIHIAPG
                     RAFYATGDIIGDIRQAYCTINKTKWHNTLKQVVEKLREQFNNTTIVFRSSGG"
BASE COUNT      124 a     44 c     52 g     69 t
ORIGIN      near the C2-V3 boundary
        1 gaggtagtaa ttagatctga aaatatctca gacaatgcta aaaccataat agtacagctg
       61 aatgaatctg tagtaattaa ttgtacaaga cccaacaaca atacaagaag aagtatacat
      121 atagcaccag ggagagcatt ttatgcaaca ggagacataa taggagatat aagacaagca
      181 tattgtacca ttaataaaac aaaatggcat aacactttaa aacaggtagt tgaaaaatta
      241 agagagcaat ttaataatac aacaatcgtc tttcgttcct ccggagggg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPA6, V3 region.
Date: 7 Apr 92 10:02:11 GMT
Distribution: bionet
Checksum: 54635     3

LOCUS       HIVFLPA6      351 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPA6, V3 region.
ACCESSION   M90858
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone A6 of DNA ID
            4428.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from patient "A" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>351
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEVVIRSANFTDNAKIIIVQLNASVKIKCTRPNNNTRKGIQ
                     IGPGRAFYATGEIIGDIRQAHCNISREKWNNTLKQVVTKLREQFENKTIIFNHSSGGD
                     PEIVMHSFNCGGEFF"
BASE COUNT      152 a     48 c     68 g     83 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaggtagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacaac tgaatgcatc tgtaaaaatt aaatgtacaa gacccaacaa caatacaaga
      121 aaaggtatac agataggacc aggaagggca ttttatgcaa caggagaaat aataggagat
      181 ataagacaag cacattgtaa cattagtaga gaaaaatgga ataatacttt aaagcaggta
      241 gttacaaaat taagagaaca atttgagaat aaaacaataa tctttaatca ctcctcagga
      301 ggggacccag aaattgtaat gcacagtttt aattgtggag gggaattttt c
//