From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Choristoneura fumiferana nuclear polyhedrosis virus p47 gene,
Date: 27 Jan 93 05:50:54 GMT
Distribution: bionet
Checksum: 31324 7

LOCUS       NPHP47A      2768 bp ds-DNA             VRL       26-JAN-1993
DEFINITION  Choristoneura fumiferana nuclear polyhedrosis virus p47 gene,
            complete cds; ORF2, complete cds.
ACCESSION   L07878
KEYWORDS    .
SOURCE      Choristoneura fumiferana nuclear polyhedrosis virus (strain HR3)
            DNA.
  ORGANISM  Choristoneura fumiferana nuclear polyhedrosis virus
            Viridae; ds-DNA enveloped viruses; Baculoviridae; Baculovirus.
REFERENCE   1  (sites)
  AUTHORS   Lu,A.L. and Carstens,E.B.
  TITLE     Nucleotide sequence and transcriptional analysis of the p80 gene of
            autographa Californica nuclear polyhedrosis virus: A homologue of
            the orgyia Pseudotsugata nuclear polyghedrosis virus
            capsid-assoiciated gene
  JOURNAL   Virology 190, 201-209 (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Carstens,E.B., Lu,A.L. and Chan,H.L.
  TITLE     Sequence, transcriptional mapping and over expression of p47, a
            baculovirus gene regulating late gene expression
  JOURNAL   J. Virol. (1993) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    complement(2441)
                     /note="early transcription start site"
     misc_feature    complement(2478)
                     /note="late transcription start site"
     CDS             complement(87..1178)
                     /note="putative;  ORF2"
                     /codon_start=1
                     /translation="MDKRANSRKPFLFYNEDYYCEKPKRYFHTNKVIFEKLDSYATNI
                     NRCRELLTDFFDYCLPKYYRRKNKFTLLFRLLEPVIKQAGASALTTVSNDQCRWLEIN
                     QFSGWEQRDNQYAHKWLIKVVGADMGQQILFIIKQVTKKFKTCNLGFHNYYKLFRRCL
                     SILLFKHKEVFVQCLQVILKAAMPVKKKGVVKSNYAFAVTNALHYYIVDNPHLLCKDI
                     NVAIKVRRLLIKHEMLPTEKQIKLSFEKCSKGIEVPLYEKLLLNHMMRINDDNLQWPS
                     LINNKKIMEWNANRCFDESNKILHVYIGQYYTSSCRRVKKSFFKYNGWNRQGRFCRTE
                     KFCHLVNLQLNKDGSKKLKRVQRKLINCK"
     CDS             complement(1186..2391)
                     /gene="p47"
                     /codon_start=1
                     /translation="MFVTRLEHTTQFLPQACKLEDEVLVLYAIYLNGFDYTLPRFVKR
                     EVQVNADGFVRFDYNIKMFDFARFTDMTQTTPEDIDDYINLTRINSLSDHDLKMLQLV
                     CRDRWYKGDVARLRRILQQKDVDDLVKFVCNVMWERAYEDHYTLGQQLSIRITTKLIQ
                     SGLDFKHQPDTTAPVSVRGWEDATFEKYLQSITSISEVIKRHVFSKKYICLEVAASYW
                     SDAVESLQQENFRIILNSKTPYVLLIEMDDDKNSMVYLRKLAHLLENKIVNLLFVTDV
                     EFYFKNGNFMFYLYNSLKFYYYCLKNKFAFENVDKEIFFLLYTIVALEWFNGGHLNSF
                     TLEKSALYNPLELSTRRLNSIKRAAQHNRVINCDSEINMDYIRGKRVRTGAHYGKRVV
                     NFDLNQSLH"
BASE COUNT      768 a    596 c    539 g    865 t
ORIGIN      
        1 aacaatcctg cagcgtttcg cattttacat atttgacact taaaaaattg cgcacacgag
       61 caccatcgtt tgatacctaa ttgcaactat ttacaattta tcagtttacg ttgaacccgt
      121 tttaattttt tagatccgtc cttgttcagt tgcaagttga ctaaatgaca aaatttttcg
      181 gttctgcaaa accgcccttg tctgttccac ccgttgtatt tgaaaaaact ttttttcacg
      241 cggcgacaac tgcttgtata atattgccca atgtaaacat gcaaaatttt gttactctcg
      301 tcaaaacagc ggttggcgtt ccattccata atttttttat tatttatcaa cgatggccat
      361 tgtaaattgt cgtcatttat acgcatcata tgatttaaca aaagcttttc gtatagcgga
      421 acttcaattc ccttggaaca tttttcaaac gataatttaa tttgtttctc ggttggcagc
      481 atttcatgct tgattaacaa tcgcctgact tttatagcca cgtttatgtc tttgcacagc
      541 aaatgtgggt tgtcgacaat gtaatagtgc aaagcatttg ttacggcaaa tgcgtagttt
      601 gatttgacga cgcccttttt cttgacgggc attgcggctt ttaaaattac ttgcaagcat
      661 tgtacgaata cctctttgtg tttaaacaat aatatggaca aacatcggcg aaacaatttg
      721 taataattat gaaatcccaa attgcaggtt ttaaacttct ttgttacttg ttttataata
      781 aataaaattt gctgacccat gtctgcgccc acaactttaa ttaaccattt gtgcgcatat
      841 tgattgtctc gttgttccca accggaaaat tgattgatct cgagccaccg gcattggtcg
      901 tttgataccg tcgttaacgc cgacgctcct gcctgtttga ttacgggttc taaaagacga
      961 aacagcagcg taaatttgtt tttgcgtcgg tagtattttg gcaggcaata atcaaaaaaa
     1021 tccgtaagca attctctgca tctattaata ttcgttgcgt acgaatcgag tttttcaaaa
     1081 attactttgt ttgtatgaaa ataacgtttg ggcttctcac aataataatc ttcgttgtag
     1141 aacagaaacg gtttgcgaga attggcacgt ttgtccatga ttggctcagt gtaacgattg
     1201 attcaaatca aaattgacaa cacgtttgcc gtaatgtgca ccggttcgca cacgtttgcc
     1261 gcgtatgtaa tccatgttta tttcgctgtc gcaattgatt acacgattgt gttgggcggc
     1321 gcgttttatt gaatttaggc gacgcgtcga caactccaaa ggattgtaaa gcgcagattt
     1381 ttccagagta aacgagttta agtggccacc gttgaaccat tccagagcca cgattgtgta
     1441 cagcaaaaag aatatttctt tgtcgacgtt ttcaaacgca aacttgtttt ttaggcaata
     1501 gtagtaaaat tttaacgaat tgtataaata aaacataaaa ttgccatttt taaagtaaaa
     1561 ttctacatcc gtgacgaaca aaaggtttac tattttgttc tccaacaagt gtgccaattt
     1621 tcttaagtac accattgaat ttttgtcgtc gtccatctcg atcaacaaca cgtacggcgt
     1681 tttggaattt aaaattattc taaaattttc ctgttgcaac gattccacag cgtccgacca
     1741 atatgacgct gccacctcta gacagatgta tttcttggaa aacacgtgtc gtttgataac
     1801 ctcgctgatg gacgtgatcg attgtaaata cttttcaaac gtcgcgtctt cccaaccacg
     1861 caccgacacg ggcgctgtcg tgtcgggctg atgtttgaaa tccaaaccac tctgaattaa
     1921 cttggttgtg attcgtatgc tcaactgttg acccaacgtg tagtgatctt cgtaggcgcg
     1981 ctcccacatc acgttacaca caaatttgac gagatcatca acgtctttct gttgcaaaat
     2041 tcgccgcaaa cgcgccacat cgcccttgta ccaccgatct cggcacacaa gctgtagcat
     2101 ttttaaatcg tgatcgctca agctattaat tctggttaga tttatatagt cgtcaatatc
     2161 ctcgggcgtg gtttgcgtca tgtctgtaaa acgtgcaaaa tcaaacattt ttatgttgta
     2221 gtcgaatcta acaaatccat cggcgttcac ttgcacttcg cgctttacaa aacgaggtag
     2281 cgtgtaatcg aacccgttta aatagattgc gtacaaaacc agcacttcat cttccagttt
     2341 gcacgcttgc ggcaaaaatt gtgtggtgtg ctccaaccgg gtgacaaaca tgactatgga
     2401 aaataacgcg gaattcaaca gacgactaga gtacgtgggc acgatcgcca caatgatgaa
     2461 acgaacattg aacgttttac gacagcaggg ctattgcacg caacaggatg cggattcttt
     2521 gtgcgtgtca gacgacacgg cggcctggtt atgcggccgt ttgccgacct gcaattttgt
     2581 atcgttccgc gtgcacatcg accagtttga gcatccaaat ccggcgttgg aatattttaa
     2641 atttgaagaa agtctggcgc aacgccaaca cgtgggcccg cgttacacgt acatgaatta
     2701 cacgcttttc aaaaacgttc gtggccctca aattggtcgt gtacacgcgc acgctacaag
     2761 ctaacatg
//