From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: P.fluorescens oprF gene for root adhesion
Date: 10 Apr 92 10:11:12 GMT
Distribution: bionet
Checksum: 37923     4

LOCUS       PSEOPRF      1316 bp ds-DNA             BCT       10-APR-1992
DEFINITION  P.fluorescens oprF gene for root adhesion
ACCESSION   X62168
KEYWORDS    oprF gene.
SOURCE      Pseudomonas fluorescens DNA.
  ORGANISM  Pseudomonas fluorescens
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
            Pseudomonadaceae.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   De Mot,R., Proost,P., van Damme,J. and Vanderleyden,J.
  TITLE     Homology of the root adhesin of Pseudomonas fluorescens OE 28.3
            with porin F of P. aeruginosa and P. syringae
  JOURNAL   Mol. Gen. Genet. 231, 489-493 (1992)
  STANDARD  full automatic
COMMENT     *source: strain=OE 28.3;
            From EMBL    entry PFOPRF;  dated 19-MAR-1992.
FEATURES             Location/Qualifiers
     CDS             170..1150
                     /function="root adhesion"
                     /gene="oprF"
                     /translation="MKLKNTLGFAIGSIIAATSFGATAQGQGAVEGELFYKKQYNDSV
                     KHIEDGFNPGARIGYFLTDDLSLNLSYDKTNHTRSNDGTGSQKIGGDTSSLTAQYHFG
                     QAGVDSLRPYVEGGFGHQSRGNVKADGHSGRDQSTLAIAGAGVKYYFTNNVYARAGVE
                     ADYALDNGKWDYSALVGLGVNFGGNAGAAAPAPTPAPAPEPTPEPEAPVAQVVRVELD
                     VKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSIGPDAYNQKLSQRRADR
                     VKQVLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVEASVEAQAQ"
     sig_peptide     170..241
                     /gene="oprF"
     mat_peptide     242..1147
                     /gene="oprF"
     repeat_region   737..784
                     /note="XP repeat"
BASE COUNT      306 a    367 c    354 g    289 t
ORIGIN
        1 tgcgttacaa gcgtgctctt gataaattac gtgagaaatt tgcgggcgag actgaaactt
       61 agtgcgtggc aaatatctct tacgtgtagg caagttctgt tagacttgtc gccgagttgt
      121 cccccggttt gtgggactgc tttacaatca ccagatgggg atttaacgga tgaaactgaa
      181 aaacaccttg ggctttgcca ttggttctat tattgccgct acttctttcg gcgcgactgc
      241 acaaggccaa ggcgcagttg aaggcgagct gttctacaag aagcagtaca acgatagcgt
      301 taagcacatc gaagacggct tcaacccagg cgctcgcatt ggttacttcc tgaccgacga
      361 cctgtcgttg aacctgtcct acgacaaaac caaccacacc cgttcgaacg acggtactgg
      421 cagccagaag atcggtggcg acactagcag cctgactgct cagtaccact tcggccaggc
      481 tggcgttgac agcctgcgtc catacgtaga aggcggtttc ggccaccaaa gccgtggcaa
      541 cgtcaaagct gacggccaca gcggtcgcga ccagtccacc ctggctatcg ccggcgctgg
      601 cgtgaagtac tacttcacca acaacgtgta cgctcgtgcc ggtgttgaag ctgactacgc
      661 actggacaac ggcaagtggg actactccgc actggtcggc ctgggtgtga acttcggcgg
      721 taacgctggc gcagctgctc cagctcctac cccagcacca gctccagagc caactccaga
      781 gccagaagct ccagttgctc aggttgttcg tgttgagctg gacgttaagt tcgacttcga
      841 caagtcggtt gttaagccta acagctacgg cgacgtgaaa aacctggccg acttcatggc
      901 tcagtaccca gctaccaacg tagaagttgc tggtcacact gactccatcg gtccagacgc
      961 ctacaaccag aagctgtccc agcgtcgtgc tgaccgtgtt aagcaagtcc tggttaaaga
     1021 cggcgttgct cctagccgca tcaccgcggt aggttacggc gaatcccgcc cagttgctga
     1081 caacgcaact gaagctggtc gcgctgttaa ccgtcgcgta gaagcgtcgg ttgaagctca
     1141 agctcagtaa ttactgagtg gtagaaaaaa gcccggctta ccgggctttt ttttgcctga
     1201 aatttacctc aggcgctggc tgacacagta atagaggcgc ttgcctgcgc ccaagcactg
     1261 ccgatcacag gattgcaggc tttcagagca atactgtgca tcgtatgcat gtgaga
//