From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Garlic virus A gene for coat protein, complete cds.
Date: 15 Sep 92 10:03:01 GMT
Distribution: bionet
Checksum: 53076     7

LOCUS       GVACP        2962 bp ss-RNA             VRL       15-SEP-1992
DEFINITION  Garlic virus A gene for coat protein, complete cds.
ACCESSION   D11157
KEYWORDS    coat protein.
SOURCE      Garlic virus A cDNA to genomic RNA.
  ORGANISM  Garlic virus A
            Viridae; Nonclassified viruses.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Sumi,S.-.
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
COMMENT     These data kindly submitted in computer readable form by:
            Shin-ichiro Sumi
            Institute for Biotechnolgy Research
            Wakunaga Pharmaceutical Co.
            1624 Shimokotachi, Koda-cho
            Takata-Gun, Hiroshima 729-64
            Japan
            Phone:  082645-2331
            Email:  tmiyake@niguts.ddbj.nig.ac.jp
            Fax:    082645-4351
FEATURES             Location/Qualifiers
     CDS             155..466
                     /note="ORF(II)"
                     /codon_start=1
                     /translation="MSFAPPPDYSKAYITLAGGAALGILVYTLRSDHLPHVGDNTHHL
                     PHGGRYCDGNKQIHYFKPNSGSPSGGSYIPPLIIFTLTLAILLLSRPRRRICIRCSES
                     H"
     CDS             577..1650
                     /note="ORF(III)"
                     /codon_start=1
                     /translation="MVIVTTFHIDQARDLVINNSNSIKDCLLNKLHTISNEVRTVGAH
                     VDSSIAFNRINLQTIYNHLSGNNNSSIQMPTAANPDPLLDPLETGTATVFRTFFSNAA
                     LAVDATRTLLGYVPPARYNIPPSTLPLDELYGQLHALHQNTLEWLTHISHNVDSILTN
                     LNPINSPSQNNSLSQIHAALTYLTRTVDSLYSNSQSTSISTDQPSSSKPLTSLEALHR
                     KIDELSSSLTNTTPGPSVTPNPSAPLPTNAARNLPIYQAAHPSKPCRTYGTILLDGVH
                     SKIPMDIIGRPASTALRLELRVTPSDQSTTVSYKIFDDGYLLTSDDIETNHRLQHYPS
                     DCLALLHQKCPNFIYKIKTHDLC"
     CDS             1708..2463
                     /product="coat protein"
                     /codon_start=1
                     /translation="MNNPVDPSTSQQMSGTTGQVSQPRPNVNPFGQSQTRPLGNRDPQ
                     NNSNASDDSDALMPAVTDFETLTKDVESNSVASRLIIRDILDMLQAKRQGATPKDLFS
                     LAWTCYHNGSSRFVTLTTDAPCGMAHSELKDIVENSCTLRQFCGFYAKACYVAGKQQN
                     KPPANWSRKGYQEDSKFAAFDFFNAVLSDSSPSPPGGMRFKPTDAEILAHSMNAKMSI
                     VESRRATNMVSTRADLLAQQQIHEQPKPPMITF"
     CDS             2463..2858
                     /note="ORF(V)"
                     /codon_start=1
                     /translation="MIPQDFNILCCLHFAKPFIPQDLKAHLFFTCVNECKLVRIAREN
                     KPFLGTSKCAQRRRAKRYNRCFECGAYLLDNHKCRIFVSRAQSDVLAVIHEGPAKLHA
                     ERTYRPNSDAALLIESDLQYIKLFQNRKA"
BASE COUNT      824 a    865 c    553 g    717 t      3 others
ORIGIN      3'portion of GVA genome.
        1 cagaggtcac tctagtgtat cattctactg aacgcctaag atcccgcgcc aacttctaca
       61 ttgctgctac gcgtgccctc aatcgcttgt gcataatcac tgacgaaata ctacctgccc
      121 tcgaaaactc tgctgagcca accaccacct gcggatgagt tttgcgccac caccggatta
      181 ctctaaggca tatatcacac tagctggagg cgccgccctt ggaatacttg tttacacgct
      241 caggtccgac cacttaccgc acgtggggga caacactcac cacttacccc acggtggtcg
      301 ctactgtgac ggcaacaagc aaatccacta cttcaaaccc aattctggct ctccatcagg
      361 aggatcctac attcccccac tcatcatctt caccctcact ctggccatac ttcttcttag
      421 ccgtcctcgc cgccgcatct gcatacgctg ctctgagtct cattaaaggt gcgccgcaag
      481 ggtgcgttat cactataacc ggctcaaccg tgcaagtttc taactgtcct ctagaaaaga
      541 tcccggccgt agttgaatcc tttcgctgga gtagccatgg taattgtaac caccttccac
      601 atcgaccaag ctcgggattt ggttatcaac aactcaaaca gcattaagga ctgcttactc
      661 aacaagttgc acacaatttc gaatgaggtg cgcactgttg gcgctcatgt cgacagctcc
      721 attgccttca acagaatcaa cttgcagact atctacaacc atctgagtgg taataacaat
      781 agctccatcc aaatgccaac ggctgcgaac cccgacccat tactcgaccc gttggaaacc
      841 ggaactgcta ccgtcttccg cactttcttt tcgaacgcag cacttgctgt agacgctacc
      901 cgcaccttac taggttacgt acctccggcc agatacaata taccaccatc gacccttcct
      961 cttgatgaac tttatgggca actgcacgca ctgcaccaaa atacactgga gtggctgaca
     1021 cacattagcc ataacgtcga ctccatttta acaaatttaa atccaatcaa ctccccgtca
     1081 caaaacaact ccttaagcca aatccatgcg gctctaacat atttgaccag gacagttgac
     1141 agtctatatt caaactcaca atcgactagt ataagcacag accaacctag ttcctcaaaa
     1201 cctcttacaa gcttagaggc actacaccgc aaaattgacg aactttcttc gtctctcaca
     1261 aataccaccc ctgggccgag tgtcacgccg aacccctccg caccactgcc aaccaatgct
     1321 gcgaggaatc tacccatcta tcaagctgcc cacccctcca aaccatgcag aacgtacgga
     1381 actatacttc ttgatggagt ccactcaaaa atacccatgg acatcattgg acgaccagct
     1441 tccacagctc tacgmcttga acttcgcgtc acacccagtg atcaatctac cactgttagt
     1501 tacaagatct tcgacgatgg gtayctgttg acttcagacg acatagaaac aaaccacaga
     1561 ttacagcatt accctagtga ctgtctcgcg ctcctacatc agaagtgtcc gaatttcatc
     1621 tataaaatta agacgcatga tctttgttaa gttaactgga agggtgaatt agatgagtag
     1681 tgaggaacta gtttaatctg aaccttgatg aacaatcctg ttgatccgag cacgtcacaa
     1741 caaatgtccg gtactacggg tcaagttagc cagcctcgac ccaacgtgaa cccctttggt
     1801 cagagtcaga cccgccccct aggcaatcgt gatccgcaaa ataatagtaa tgcaagygac
     1861 gactccgacg cactcatgcc cgctgtgacc gactttgaga ctctcactaa agatgtcgaa
     1921 tccaactcag tcgcttcaag gttaattatt cgcgacatac ttgacatgct acaagccaag
     1981 cgacaaggag ccaccccaaa agaccttttc tcactagctt ggacctgcta ccacaacggt
     2041 tcatcgcgat ttgttaccct gaccactgac gcgccttgcg gcatggcgca ctcggaactc
     2101 aaagacatcg ttgaaaattc ctgtacgcta agacagtttt gcggttttta tgctaaagcc
     2161 tgctacgtcg caggcaaaca acaaaacaag ccccctgcca attggtctag gaaaggttat
     2221 caggaagact caaaatttgc cgctttcgac ttctttaacg ctgtactcag cgactcttct
     2281 ccgagtcctc ccggaggtat gagatttaaa cctacagacg ccgaaatcct cgcgcattct
     2341 atgaatgcta agatgtctat tgttgaatct aggcgcgcca ccaacatggt ctccactcgc
     2401 gcggatttac tcgcacaaca acaaatacat gagcagccta aacctccaat gatcacgttc
     2461 taatgattcc tcaagacttt aatatccttt gctgcctaca ctttgccaaa cccttcatcc
     2521 ctcaagacct caaagctcat ctcttcttca cttgcgtcaa cgaatgtaaa ttagtaagaa
     2581 tagctagaga aaataagcca tttctaggca cttctaagtg tgctcagcgc cgtagagcga
     2641 aacgctataa taggtgtttc gaatgcggtg cctatttact agataaccat aaatgtagaa
     2701 tctttgtatc acgtgctcaa tcagatgtgc tagccgtcat acacgaggga cccgctaagc
     2761 tacatgctga aaggacctac aggccaaatt ctgacgctgc gctgctcatt gagagtgatc
     2821 tacagtacat caaacttttc caaaatcgta aggcttgacc caagcctccc acagggttta
     2881 cagggttctg gacgtggaca aagacaccca cgattgttga tattgctaaa cttaccttgc
     2941 aacaactatt gtccccagtg ac
//