From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C.caldarium rhodoplast apcB, apcL9.5, cpcC genes
Date: 28 Dec 92 21:26:06 GMT
Distribution: bionet
Checksum: 03188 6

LOCUS       CYNRHAPCB    2009 bp ds-DNA             PLN       01-DEC-1992
DEFINITION  C.caldarium rhodoplast apcB, apcL9.5, cpcC genes
ACCESSION   X57251
KEYWORDS    beta-allophycocyanin.
SOURCE      Cyanidium caldarium DNA.
  ORGANISM  Cyanidium caldarium
            Eukaryota; Rhodophycota; Rhodophyceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Valentin,K., Maid,U. and Zetsche,K.
  TITLE     Organization and expression of a phycobiliprotein gene cluster from
            the unicellular red alga cyanidium caldarium
  JOURNAL   Plant Mol. Biol. 20, 267-276 (1992)
  STANDARD  full automatic
COMMENT     From EMBL    entry CCRHAPCB;  dated 14-OCT-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..3
                     /note="stop codon of psbA gene"
     -35_signal      76..81
                     /gene="apcB"
     -10_signal      99..105
                     /gene="apcB"
     RBS             126..133
                     /gene="apcB"
     terminator      902..951
                     /note="put. bidirectional terminator"
     RBS             complement(1698..1702)
                     /gene="cpcC"
     -10_signal      complement(1759..1765)
                     /gene="cpcC"
     -35_signal      complement(1779..1785)
                     /gene="cpcC"
     misc_feature    2007..2009
                     /note="start codon of ORF 306/921"
     CDS             141..632
                     /gene="apcB"
                     /product="beta-allophycocyanin"
                     /codon_start=1
                     /translation="MKDTINKTLESYDLKGKYLDIEAINKLEIYFKSANLRIDIIKFI
                     NEQAVLIIKETSAELFEEYIDLLRPGGNAYTTRRYAACIRDLDYYLRYATYSMLADDP
                     SILDERVLNGLKETYNSLGVPIGATIRALSIMKKIVQKQVSQEAQNIVSLPFDYMINS
                     LSY"
     CDS             647..898
                     /gene="apcB L9.5"
                     /codon_start=1
                     /translation="MQLIIINTLLGIFSSNLLCTIYTQTGDWSLYLTSCIIALYEIIS
                     YISYNQFIKKTHKNIINCFNGFKIGLIYGLYLDAFKLGS"
     CDS             complement(959..1690)
                     /gene="cpcC"
                     /codon_start=1
                     /translation="MSIPLLYYPLSTQNQRVESFEILSNEEQSKIYTTDTLPSASEMD
                     ELIWAAYRQIFSEHQILKFTRQRFLESQLRFNQIKVREFIRGLAISDSFRKLNYDVNN
                     NYRFVELCVQRILGRDVYNEKEKIAWSIVICNKGVIGFIDCLINSQEYLENFGDNIVP
                     YQRRRIIFQRVNGETPFNLKTPRYGIEFRDKLVKPQFIWQGAIRRFRPQEQRPRAGDP
                     VLFLNMVYDLNITPKFNRYPGLVNR"
BASE COUNT      782 a    225 c    242 g    760 t
ORIGIN      
        1 taaaaaaaaa ctaaactctt aaaagagttt agtttttttt ttaaccattt atttctactt
       61 tatttttttt ataaattgta aataataaac attagttgtt ataatttttg tatagatttt
      121 attatgaggg aagtttaatt atgaaagata ctataaataa aactttagaa agttacgatt
      181 taaagggaaa gtatttagac atagaagcaa ttaataaatt agaaatttat tttaaatcag
      241 ctaatttacg cattgatatt ataaaattta ttaacgaaca agcggtttta attattaaag
      301 agaccagtgc tgagttattt gaagaatata ttgatttatt aagaccaggc ggtaatgctt
      361 atacaacaag aagatacgca gcatgtataa gagatttaga ctattatttg agatatgcta
      421 cctatagtat gttagcagat gacccatcaa ttttggatga aagagtatta aatggtctaa
      481 aagaaactta taattcttta ggcgtaccta ttggtgctac tattagagca cttagtataa
      541 tgaaaaaaat tgtacaaaaa caagtaagtc aagaagccca aaatatagtt agcttacctt
      601 ttgattatat gattaattct ttaagttatt aattatttat atatttatgc aattaattat
      661 tattaataca ttattaggaa ttttttcttc taatttatta tgtacaatat atactcaaac
      721 aggtgattgg agtctatatc ttacatcctg cattatagct ttatatgaaa ttataagtta
      781 tataagctat aatcaattta taaaaaaaac acataaaaat atcataaatt gtttcaatgg
      841 ttttaaaatt ggattaattt acggattata tttagatgcg tttaaattag gaagctaaaa
      901 agctaaaaaa aaagaacaaa gtaaatattt actttgttct ttttttttag cattaatatt
      961 agcgattaac taatccaggg tatctattga atttaggagt aatatttaag tcataaacca
     1021 tatttaaaaa caaaacagga tcacctgctc taggtctttg ttcttgagga cgaaatcggc
     1081 gaatggcacc ttgccaaata aattgaggtt taactaattt atctctgaat tctattccat
     1141 atcttggagt ttttagatta aatggagttt ccccattaac acgttgaaaa attattcttc
     1201 ttctttgata aggaactata ttgtcaccaa agttttctaa atattcttga ctattaatta
     1261 agcaatcaat aaaacctatt acacctttat tacatataac aattgaccaa gctatttttt
     1321 ctttctcatt atatacatct cgtccaagaa ttctctggac acataattca acaaaacgat
     1381 aattattatt tacatcataa tttaattttc taaaagaatc tgatatagct aatcctctaa
     1441 taaattctct tactttaatt tgattaaaac gtaattgtga ttctagaaat ctttgtcttg
     1501 taaattttaa aatttgatgt tcactaaata tttgacggta tgctgcccaa attaattcat
     1561 ccatctcgga agcacttggg agagtatcag ttgtataaat tttagattgt tcttcgtttg
     1621 ataaaatttc aaaactttct acacgttgat tttgtgttga caaaggataa tataaaagag
     1681 gaatagacat aaaacaatct ccaatatatt ttattagctt tattaagaaa aatatatatc
     1741 attaaactaa tatttaatat tataaattta gtttatattt tgaattatat tagtaataaa
     1801 ttttaactaa atattaaatg aataaaaatt ataattctta tcttggactt agtttagaac
     1861 aagaatttaa actcaaatta tattcacaaa tagtagagac tttaaatgaa aagcaaaaaa
     1921 acgattatta ctggaaattt taaaatatat gttattaaat gataatatat taaaatattt
     1981 aataaaatat actaatttaa aataatatg
//