From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Xanthomonas campestris pv. malvacearum interactions between cotton
Date: 21 Dec 92 20:54:24 GMT
Distribution: bionet
Checksum: 45862 8

LOCUS       XANRAVR      3856 bp ds-DNA             BCT       20-NOV-1992
DEFINITION  Xanthomonas campestris pv. malvacearum interactions between cotton
            R genes and X. campestris pv. malvacearum avr genes.
ACCESSION   L06634
KEYWORDS    .
SOURCE      Xanthomonas campestris (pathovar malvacearum) DNA.
  ORGANISM  Xanthomonas campestris
            Prokaryotae; Gracilicutes; Scotobacteria; Pseudomonadaceae.
REFERENCE   1  (bases 1 to 3856)
  AUTHORS   De Feyter,R., Yang,Y. and Gabriel,D.W.
  TITLE     Gene-for-genes interactions between cotton R genes and X.
            campestris pv. malvacearum avr genes
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_region   314..375
                     /rpt_type=INVERTED
                     /note="putative"
                     /citation=[1]
     -35_signal      480..485
                     /citation=[1]
     -10_signal      505..510
                     /note="putative"
                     /citation=[1]
     RBS             553..558
                     /citation=[1]
     repeat_region   1430..2857
                     /rpt_type=TANDEM
                     /rpt_unit=(1430..1531)
                     /note="putative"
                     /citation=[1]
     repeat_region   complement(3702..3763)
                     /rpt_type=INVERTED
                     /note="putative"
                     /citation=[1]
     CDS             566..3652
                     /function="host-specific virulence; host gene-specific
                     avirulence"
                     /citation=[1]
                     /note="putative"
                     /codon_start=1
                     /translation="MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLP
                     ARRTMSRTRLPSPPAPSPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATG
                     EWDEVQSGLRAADAPPPTMRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGY
                     SQQQQEKIKPKVRSTVAHDHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALP
                     EATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVH
                     AWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASN
                     IGGKQALETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLT
                     PEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLL
                     PVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLPPEQVVAIASHDGGK
                     QALETVQRLLPVLCQAHGLTLDQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPQQV
                     VAIASNSGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLC
                     QAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALE
                     TVQRLLPVLCQAHGLTPAQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIA
                     SNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLPHAPALIK
                     RTNRRIPERTSHRVADHAQVVRVLGFFQCHSHPAQAFDDAMTQFGMSRHGLVQLFRRV
                     GVTELEARSGTLPPASQRWDRILQASGMKRAKPSPTSTQTPDQASLHAFADSLERDLD
                     APSPMHEGDQTRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHLPLSWRVKRPRT
                     SIGGGLPDPGTPTAADLAASSTVMREQDEDPFAGAADDFPAFNEEELAWLMELLPQ"
BASE COUNT      692 a   1197 c   1282 g    685 t
ORIGIN      
        1 gaattctgtc gcgcccttgc aatcgagcag ccggcttaaa agactccgac cattccgagg
       61 gccgtgttcg gggcgctcag ccgctgcgac ccactggtag agcagtaccc acatacacaa
      121 cggggcctag tgagcgtgac acggtggaac aacatcctgg atggagggcg gatattcgat
      181 atgtcgcacc tggattcctt cgacgcataa gagcaacttg atgggcggac tatcacagtg
      241 tgctattcgt tttggccgta taccttttcc gatgaaaagg ccaatgggtg cgcgcttgag
      301 cacgggcgtt attgagggtt ggcagggatt cgtgtaaaac acagccaaaa gtgagctaac
      361 tcgctgtcat caaagaaatt tttcacaaac tttcgccgat cctccatgcg ggtccgggat
      421 cgcctccatg tctgcgcctc accccggtcg tcgagggttg ccaggatcac ccgaagttgt
      481 gtactgccat gcggcctcgg aagctatgta gggaccacag gccgttagtc ttgaggcgac
      541 catggtttct gtagaggcat gcctgatgga tcccattcgt tcgcgcacgc caagtcctgc
      601 ccgcgagctt ctgcccggcc cccaaccgga tggggttcag ccgactgcag atcgtggggt
      661 gtctccgcct gccggcggcc ccctggatgg cttgcccgct cggcggacga tgtcccggac
      721 ccggctgcca tctccccctg ccccctcacc tgcgttctcg gcgggcagct tcagtgacct
      781 gttacgtcag ttcgatccgt cactttttaa tacatcgctt tttgattcat tgcctccctt
      841 cggcgctcac catacagagg ctgccacagg cgagtgggat gaggtgcaat cgggtctgcg
      901 ggcagccgac gcccccccac ccaccatgcg cgtggctgtc actgccgcgc ggccgccgcg
      961 cgccaagccg gcgccgcgac gacgtgctgc gcaaccctcc gacgcttcgc cggccgcgca
     1021 ggtggatcta cgcacgctcg gctacagcca gcagcaacag gagaagatca aaccgaaggt
     1081 tcgttcgaca gtggcgcacg accacgaggc actggtcggc catgggttta cacacgcgca
     1141 catcgttgcg ctcagccaac acccggcagc gttagggacc gtcgctgtca agtatcagga
     1201 catgatcgca gcgttgccag aggcgacaca cgaagcgatc gttggcgtcg gcaaacagtg
     1261 gtccggcgca cgcgctctgg aggccttgct cacggtggcg ggagagttga gaggtccacc
     1321 gttacagttg gacacaggcc aacttctcaa gattgcaaaa cgtggcggcg tgaccgcagt
     1381 ggaggcagtg catgcatggc gcaatgcact gacgggtgcc cccctgaacc tgaccccgga
     1441 gcaggtggtg gccatcgcca gccacgatgg cggcaagcag gcgctggaga cggtgcagcg
     1501 gctgttgccg gtgctgtgcc aggcccatgg cctgaccccg gagcaggtgg tggccatcgc
     1561 cagcaatatt ggtggcaagc aggcgctgga gacggtgcag gcgctgttgc cggtgctgtg
     1621 ccaggcccat ggcctgaccc cggagcaggt ggtggccatc gccagcaatg gcggtggcaa
     1681 gcaggcgctg gagacggtgc agcggctgtt gccggtgctg tgccaggccc atggcctgac
     1741 cccggagcag gtggtggcca tcgccagcca cgatggcggc aagcaggcgc tggagacggt
     1801 gcagcggctg ttgccggtgc tgtgccaggc ccatggcctg accccggagc aggtggtggc
     1861 catcgccagc cacgatggcg gcaagcaggc gctggagacg gtgcagcggc tgttgccggt
     1921 gctgtgccag gcccatggcc tgaccccgga gcaggtggtg gccatcgcca gcaatattgg
     1981 tggcaagcag gcgctggaga cggtgcagcg gctgttgccg gtgctgtgcc aggcccatgg
     2041 cctgcccccg gagcaggtgg tggccatcgc cagccacgat ggcggcaagc aggcgctgga
     2101 gacggtgcag cggctgttgc cggtgctgtg ccaggcccat ggcctgaccc tggaccaggt
     2161 cgtggccatc gccagcaata ttggtggcaa gcaggcgctg gagacggtgc agcggctgtt
     2221 gccggtgctg tgccaggccc atggcctgac cccgcagcag gtggtggcca tcgccagcaa
     2281 tagcggtggc aagcaggcgc tggagacggt gcagcggctg ttgccggtgc tgtgccaggc
     2341 ccatggcctg accccggagc aggtggtggc catcgccagc cacgatggcg gcaagcaggc
     2401 gctggagacg gtgcagcggc tgttgccggt gctgtgccag gcccatggcc tgaccccgga
     2461 gcaggtggtg gccatcgcca gccacgatgg cggcaagcag gcgctggaga cggtgcagcg
     2521 gctgttgccg gtgctgtgcc aggcccatgg cctgaccccg gagcaggtgg tggccatcgc
     2581 cagccacgat ggcggcaagc aggcgctgga gacggtgcag cggctgttgc cggtgctgtg
     2641 ccaggcccat ggcctgaccc cggcacaggt ggtggccatc gccagcaata acggcggcaa
     2701 gcaggcgctg gagacggtgc agcggctgtt gccggtgctg tgccaggccc atggcctgac
     2761 cccggagcag gtggtggcca tcgccagcaa tggcggcggc aggccggcgc tggagagcat
     2821 tgttgcccag ttatctcgcc ctgatccggc gttggccgcg ttgaccaacg accacctcgt
     2881 cgccttggcc tgcctcggcg gacgtcctgc gctggatgca gtgaaaaagg gattgccgca
     2941 cgcgccggcc ttgatcaaaa gaaccaatcg ccgtattccc gaacgcacat cccatcgcgt
     3001 tgccgaccac gcgcaagtgg ttcgcgtgct gggttttttc cagtgccact cccacccagc
     3061 gcaagcattt gatgacgcca tgacgcagtt cgggatgagc aggcacgggt tggtacagct
     3121 ctttcgcaga gtgggcgtca ccgaactcga agcccgcagt ggaacgctcc ccccagcctc
     3181 gcagcgttgg gaccgtatcc tccaggcatc agggatgaaa agggccaaac cgtcccctac
     3241 ttcaactcaa acgccggatc aggcgtcttt gcatgcattc gccgattcgc tggagcgtga
     3301 ccttgatgcg cctagcccaa tgcacgaggg agatcagacg cgggcaagca gccgtaaacg
     3361 gtcccgatcg gatcgtgctg tcaccggtcc ctccgcacag caatcgttcg aggtgcgcgt
     3421 tcccgaacag cgcgatgcgc tgcatttgcc cctcagttgg agggtaaaac gcccgcgtac
     3481 cagtatcggg ggcggcctcc cggatcctgg tacgcccacg gctgccgacc tggcagcgtc
     3541 cagcaccgtg atgcgggaac aagatgagga ccccttcgca ggggcagcgg atgatttccc
     3601 ggcattcaac gaagaggagc tcgcatggtt gatggagcta ttgcctcagt gaggctcagt
     3661 cggtgactac ctgagcgtcg gcagggattg gtgtaagtaa cctttactga cagcgagtta
     3721 gcccactttt ggctgttttt tacacaaatc cctgcctccc ctctagtcct cgaactcgtg
     3781 gggcgacggt ccggccgtct actaagggat tcgcactggc gaacgacgga acatcaccaa
     3841 cgtattgacg ctgaca
//