From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Transposon Tn5053 from Plasmid RP1 (Xanthomonas sp.), 5' end.
Date: 29 Dec 92 21:39:17 GMT
Distribution: bionet
Checksum: 56128 4

LOCUS       TRN5053A     1188 bp ds-DNA             BCT       15-DEC-1992
DEFINITION  Transposon Tn5053 from Plasmid RP1 (Xanthomonas sp.), 5' end.
ACCESSION   L03729 L03730
KEYWORDS    inducer; integron; merR gene; merR regulatory protein; parB gene;
            repressor; terminal repeat; transposable element; transposon.
SOURCE      Transposon Tn5053 DNA; and Plasmid RP1 DNA.
  ORGANISM  Transposon Tn5053
            Prokaryotae.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Kholodii,G.Y., Yurieva,O.V., Lomovskaya,O.L., Gorlenko,Z.M.,
            Mindlin,S.Z. and Nikiforov,V.G.
  TITLE     Tn5053, a mercury resistance transposon with integron's ends
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_unit     594..598
                     /rpt_type=direct
                     /evidence="EXPERIMENTAL"
                     /note="target duplication"
     repeat_unit     599..623
                     /evidence="EXPERIMENTAL"
                     /note="Tn5053 terminal repeat"
     transposon      599..>1188
                     /function="mercury resistance"
                     /evidence="EXPERIMENTAL"
                     /note="Tn5053 from the chromosome of environmental isolate
                     from mercury deposit, Kirgizia"
     repeat_unit     663..700
                     /note="homologous to Tn21 terminal repeat; putative"
     CDS             complement(<1..258)
                     /standard_name="parB protein"
                     /gene="parB"
                     /note="putative"
                     /codon_start=1
                     /translation="MKRRSYAMLRAAAALAVLVVASPAWAELRGEVVRIIDGDTIDVL
                     VDKQPVRVRLVDIDAPEKRQAFGERARQALAGMVFRRHVLVD"
     CDS             complement(255..548)
                     /standard_name="parC protein"
                     /gene="parC"
                     /note="putative"
                     /codon_start=1
                     /translation="MGIPNLTKGDAMRAAKHYRQLLSIDFNIEALAFVPGPDGTRGRR
                     IHVLGREVRDRPGLVEYLSPAFGSRVALDGYCKANFDAVLHLAYPDHQQWGHA"
     CDS             complement(717..1151)
                     /note="putative"
                     /product="merR protein repressor/inducer"
                     /codon_start=1
                     /translation="MENNLENLTIGVFARTAGVNVETIRFYQRKGLLPEPDKPYGSIR
                     RYGETDVTRVRFVKSAQRLGFSLDEIAELLRLEDGTHCEEASSLAEHKLKDVRERMAD
                     LARMEAVLSDLVCACHARKGNVSCPLIASLQGKKEPRSADAV"
BASE COUNT      227 a    391 c    347 g    223 t
ORIGIN      
        1 gtcgaccagg acgtgccggc ggaacaccat gccggccagc gcctggcgcg cacgttcgcc
       61 gaaggcttgc cgcttttccg gcgcgtcaat gtccaccagg cgcacgcgca ccggctgctt
      121 gtctaccagc acgtcgatgg tgtcgccgtc gatgatgcgc acgacctcgc cgcgcagctc
      181 ggcccatgcc ggcgaggcaa cgaccaggac ggccagcgcg gcagcggcgc gcagcatggc
      241 gtagcttcgg cgcttcatgc gtggccccat tgctgatgat cggggtacgc caggtgcagc
      301 actgcatcga aattggcctt gcagtagccg tccagcgcca cccgcgagcc gaacgccggc
      361 gaaaggtact cgaccaggcc gggccggtcg cggacctcgc gccccaggac gtggatgcgc
      421 cggccgcgtg tgccgtcggg tccaggcacg aaggccagcg cctcgatgtt gaagtcgatg
      481 gatagaagtt gtcggtagtg cttggccgcc ctcatcgcgt cccccttggt caaattgggt
      541 atacccattt gggcctagtc tagccggcat ggcgcattac agcaatacgc aatttaaatg
      601 tcactttcag aaggcgacag cacgaaatat caaaagtcga ccgcacggtc ttttctgacg
      661 ttggagtcgc ctcagaaaac ggaaaataaa gcacgctaag gcgtagttcc ctcgggctac
      721 accgcgtccg cactgcgcgg ttctttcttc ccttgcagtg acgcaatcag cgggcaggaa
      781 acgttcccct tccgcgcatg gcaggcgcac accaaatcag acagcacggc ctccatgcgc
      841 gccaggtcag ccatcctctc gcgcacgtcc ttgagcttgt gctcggccag gctgctggct
      901 tcctcacaat gggtgccatc ctccagccgc agcagctcgg cgatctcatc caggctgaag
      961 cccaaccgct gggctgattt cacgaagcgc acccgcgtta catccgtctc gccatagcgg
     1021 cgaatgctgc cgtaaggctt gtccggttcc gggagcaagc ccttgcgctg atagaaccgg
     1081 atggtctcca cattgacccc ggccgtcctg gcgaaaacgc caatggtcag gttctccaaa
     1141 ttgttttcca tatcgcttga ctccgtacat aactacggaa gtaagctt
//