From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: R.norvegicus mRNA for NMDA receptor subunit, type NMDAR1-LL
Date: 15 Aug 92 10:03:01 GMT
Distribution: bionet
Checksum: 49762     7

LOCUS       RATNMDA      2880 bp ss-RNA             ROD       15-AUG-1992
DEFINITION  R.norvegicus mRNA for NMDA receptor subunit, type NMDAR1-LL
ACCESSION   X65227
KEYWORDS    NMDA receptor; ligand gated ion channel.
SOURCE      Rattus norvegicus RNA.
  ORGANISM  Rattus norvegicus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Anantharam,V., Panchal,R., Wilson,A., Koltchin,V.V., Treistman,S.N.
            and Bayley,H.
  TITLE     Combinatorial RNA splicing alters the surface charge on the NMDA
            receptor
  JOURNAL   FEBS Lett. 305, 27-30 (1992)
  STANDARD  full automatic
COMMENT     *source: tissue=brain; *source: clone_library=PCR;
            From EMBL    entry RNNMDA;  dated 06-AUG-1992.
FEATURES             Location/Qualifiers
     CDS             1..2880
                     /product="NMDA receptor subunit, type NMDAR1-LL"
                     /codon_start=1
                     /translation="MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFRE
                     AVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHF
                     TPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNW
                     NHIILLVSDDHEGRAAQKRLETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQF
                     DPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREIS
                     GNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTN
                     IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTH
                     VIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGD
                     PVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ
                     ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKE
                     IPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTL
                     SSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPE
                     ERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ
                     AVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSIL
                     KSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEI
                     AYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRAITSTLASSFKR
                     RRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRESS"
     misc_feature    571..633
                     /note="alternative cassette 1"
     misc_feature    2653..2763
                     /note="alternative cassette 2"
BASE COUNT      710 a    786 c    809 g    575 t
ORIGIN
        1 atgagcacca tgcacctgct gacattcgcc ctgctttttt cctgctcctt cgcccgcgcc
       61 gcctgcgacc ccaagatcgt caacatcggc gcggtgctga gcacgcgcaa gcatgaacag
      121 atgttccgcg aggcagtaaa ccaggccaat aagcgacacg gctcttggaa gatacagctc
      181 aacgccactt ctgtcaccca caagcccaac gccatacaga tggccctgtc agtgtgtgag
      241 gacctcatct ctagccaggt ctacgctatc ctagttagcc acccgcctac tcccaacgac
      301 cacttcactc ccacccctgt ctcctacaca gctggcttct acagaatccc tgtcctggga
      361 ctgactaccc gaatgtccat ctactctgac aagagtatcc acctgagttt ccttcgcacg
      421 gtgccgccct actcccacca gtccagcgtc tggtttgaga tgatgcgagt ctacaactgg
      481 aaccacatca tcctgctggt cagcgacgac cacgagggac gggcagcgca gaagcgcttg
      541 gagacgttgc tggaggaacg ggagtccaag agtaaaaaaa ggaactatga aaacctcgac
      601 caactgtcct atgacaacaa gcgcggaccc aaggcagaga aggtgctgca gtttgaccca
      661 ggaaccaaga atgtgacggc tctgctgatg gaggcccggg aactggaggc ccgggtcatc
      721 atcctttctg caagcgagga cgacgctgcc acagtgtacc gcgcagccgc aatgctgaac
      781 atgacgggct ctgggtacgt gtggctggtc ggggaacgcg agatctctgg gaacgccctg
      841 cgctacgctc ctgatggcat catcggactt cagctcatca atggcaagaa tgagtcagcc
      901 cacatcagtg acgccgtggg cgtggtggca caggcagttc acgaactcct agagaaggag
      961 aatatcactg acccaccgcg gggttgcgtg ggcaacacca acatctggaa gacaggacca
     1021 ttgttcaaga gggtgctgat gtcttctaag tatgcggacg gagtgactgg ccgtgtggaa
     1081 ttcaatgagg atggggaccg gaagtttgcc aactatagta tcatgaacct gcagaaccgc
     1141 aagctggtgc aagtgggcat ctacaatggt acccatgtca tcccaaatga caggaagatc
     1201 atctggccag gaggagagac agagaaacct cgaggatacc agatgtccac cagactaaag
     1261 atagtgacaa tccaccaaga gcccttcgtg tacgtcaagc ccacaatgag tgatgggaca
     1321 tgcaaagagg agttcacagt caatggtgac ccagtgaaga aggtgatctg tacggggcct
     1381 aatgacacgt ccccaggcag cccacgccac acagtgcccc agtgctgcta tggcttctgc
     1441 atagacctgc tcatcaagct ggcgcggacc atgaatttta cctatgaggt gcacctggtg
     1501 gcagatggca agtttggcac acaggagcgg gtaaacaaca gcaacaaaaa ggagtggaac
     1561 ggaatgatgg gcgagctact cagtggccaa gcggacatga ttgtggcacc actgaccatc
     1621 aacaatgagc gtgcgcagta catagagttc tccaagccct tcaagtacca gggcctgacc
     1681 attttggtca agaaggagat tcccaggagc acactggact catttatgca gccttttcag
     1741 agcacactgt ggttgctagt aggactgtca gttcatgtgg tggctgtgat gctgtacctg
     1801 ctggaccgct tcagtccctt tggccgattc aaggtgaaca gtgaggagga ggaggaagat
     1861 gcactgaccc tgtcctctgc catgtggttt tcctggggcg tcctgctcaa ctccggcatt
     1921 ggggaaggtg ccccccggag tttctctgca cgtatcctag gcatggtgtg ggctggtttc
     1981 gccatgatca tagtggcttc ctacactgcc aacttggcag ctttcctggt gctggatcgg
     2041 cctgaggagc gcatcacggg catcaatgac cccaggctca gaaacccctc agacaagttc
     2101 atctacgcaa ctgtaaagca gagctccgtg gacatctact tccggaggca ggtggagttg
     2161 agtaccatgt accggcacat ggaaaaacac aattacgaga gcgcagctga ggccatccag
     2221 gctgtgcggg acaacaagct gcacgccttt atctgggact cggccgtgct ggagtttgag
     2281 gcttcacaga agtgcgatct ggtgaccacg ggtgagctgt tcttccgctc aggctttggc
     2341 atcggcatgc gcaaggacag cccctggaag cagaacgttt ccctgtccat actcaagtcc
     2401 catgagaatg gcttcatgga agatctggat aagacatggg ttcggtatca ggaatgcgac
     2461 tcccgcagca atgctcctgc aaccctcact tttgagaaca tggcaggggt cttcatgctg
     2521 gtggctggag gcatcgtagc tgggattttc ctcattttca ttgagatcgc ctacaagcga
     2581 cacaaggatg cccgtaggaa gcagatgcag ctggcttttg cagccgtgaa cgtgtggagg
     2641 aagaacctgc aggatagaaa gagtggtaga gcagagcccg accctaaaaa gaaagccaca
     2701 tttagggcta tcacctccac cctggcctcc agcttcaaga gacgtaggtc ctccaaagac
     2761 acgagcaccg ggggtggacg cggcgctttg caaaaccaaa aagacacagt gctgccgcga
     2821 cgcgctattg agagggagga gggccagctg cagctgtgtt cccgtcatag ggagagctga
//