From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Cauliflower mosaic virus movement protein gene, aphid transmission
Date: 31 Jul 92 10:01:46 GMT
Distribution: bionet
Checksum: 42213    15

LOCUS       MCAMADCRI    8032 bp ds-DNA             VRL       31-JUL-1992
DEFINITION  Cauliflower mosaic virus movement protein gene, aphid transmission
            protein gene, DNA binding protein gene, capsid protein gene,
            reverse transcriptase gene, and inclusion body matrix protein gene,
            complete cds.
ACCESSION   M90542
KEYWORDS    DNA binding protein; aphid transmission protein; capsid protein;
            inclusion body matrix protein; movement protein;
            reverse transcriptase.
SOURCE      Cauliflower mosaic virus (individual_isolate BBC) DNA.
  ORGANISM  Cauliflower mosaic virus
            Viridae; ds-DNA nonenveloped viruses; Caulimovirus.
REFERENCE   1  (bases 1 to 8032)
  AUTHORS   Chenault,K.D. and Melcher,U.K.
  TITLE     The complete nucleotide sequence of cauliflower mosaic virus
            isolate BBC
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             364..1347
                     /product="movement protein"
                     /codon_start=1
                     /translation="MDLYPEENTQSEQSHNSENNMQIFKSENSDGFSSDLMISNDQLK
                     NISKTQLTLEKEKIFKMPNVLSQVMKRAFSRKNEILYCVSTKELSVDIHDATGKVYLP
                     LITREEINKRLSSLKPEVRKTMSMVHLGAVKILLKAQFRNGIDTPIKIALIDDRINSR
                     RDCLLGAAKGNLAYGKFMFTVYPKFGISLNTQRLNQTLSLIHDFENKNLMNKGDKVMT
                     ITYMVGYALTNSHHSIDYQSNATIELEDVFQEIGNVHESDFCTIQNDECNWAIDIAQN
                     KALLGAKTKSQIGNNLQIGNSASSSNTENELARVSQNIDLLKNKLKEICGE"
     CDS             1349..1828
                     /product="aphid transmission protein"
                     /codon_start=1
                     /translation="MRITGQPHVYKKDTIIRLKPLSLNSNNRSYVFSSSKGNIQNIIN
                     HLNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKTIFKSGGVDYSSQL
                     KEIKSLLEAQNTRIKNLEKAIQSLDNKIEPEPLTKKEVKELKESINSIKEGLKNIIG"
     CDS             1830..2219
                     /product="DNA binding protein"
                     /codon_start=1
                     /translation="MANLNQIQKEVSEILSDQKSMKSDIKAILELLGSQNPTKESLEA
                     VAAKIVNDLTKLINDCPCNKEILEALGNQPKEQLIEQPKEKGKGLNLGKYSYPNYGVG
                     NEELGSSGNPKALTWPFKAPAGWPNQF"
     CDS             2201..3667
                     /product="capsid protein"
                     /codon_start=1
                     /translation="MAESILDRTINRFWYNLGEDCLSESQFDLMIRLMEESLDGDQII
                     DLTSLPSDNLQVEQVMTTTDDSISEESEFLLAIGETSEDESDSGEEPEFEQVRMDRTG
                     GTEIPKKEDGAEPSRYNERKRKTTEDRYFPTQPKTIPGQKQTSMGILNIDCQTNRRTL
                     IDDWAAEIGLIVKTNREDYLDPETILLLMEHKTSGIAKELIRNTRWNRTTGDIIEQVI
                     DAMYTMFLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTEL
                     ADFPGYINQYLSKIPIIGEKALTRFRHEANGTSIYSLGFAAKIVKEELSKICALSKKQ
                     KKLKKFNKKCCSIGEASVEYGCKKTSKKKYHNKRYKKKYKVYKPYKKKKKFRSGKYFK
                     PKEKKGSKQKYCPKGKKDCRCWISNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE
                     EPYEGVQEVFILEYKEEEEETSTEESDGSSTSEDSDSD"
     CDS             3630..5669
                     /product="reverse transcriptase"
                     /codon_start=1
                     /translation="MDHLLLKTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFV
                     DTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAREIFKIPT
                     VYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKLTRAVRVGTEGFLE
                     SMKKRSKTQQPEPVNISTNKIENPLKEIAILSEGRRLSEEKLFITQQRMQKIEELLEK
                     VCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK
                     PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKK
                     IFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR
                     VFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGL
                     EIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKL
                     KENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKI
                     NEGTNTELICRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTH
                     FKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREFNKVNS"
     CDS             5773..7335
                     /product="inclusion body matrix protein"
                     /codon_start=1
                     /translation="MENIEKLLMQEKILMLELDLVRAKISLARANGSSQQGDLSLHRE
                     TPVKEEAVHSALATFTPTQVKAIPEQTAPGKESTNPLMASILPKDMNPVQTGIRLAVP
                     GDFLRPHQGIPIPQKSELSSTVVPLRDESGIQHPHINYYVVYNGPHAGIYDDWGCTKA
                     ATNGVPGVAHKKFATITEARAAADAYTTSQQTDRLNFIPKGEAQLKPKSFREALTSPP
                     KQKAHWLTLGTKRPSSDPAPKEISFAPEITMDDFLYLYDLGRKFDGEGDDTMFTTDNE
                     KISLFNFRKNADPQMVREAYAAGLIKTIYPSNNLQEIKYLPKKVKDAVKRFRTNCIKN
                     TEKDIFLKIRSTIPVWTIQGLLHKPRQVIEIGVSKKVVPTESKAMESKIQIEDLTELA
                     VKTGEQFIQSLLRLNDKKKIFVNMVEDDTLVYSKNIKDTVSEDQRAIETFQQRVISGN
                     LLGFHCPAICHFIERTVEKEGGSYKVHHCDKGKAIVQDASADSGPKDGPPPTRSIVEK
                     EDVPTTSSKQVD"
BASE COUNT     2942 a   1645 c   1565 g   1880 t
ORIGIN
        1 ggtatcagag ccatgaatcg gtttaaagac caaattcaag agggtaaaac ctcaccaata
       61 aacaaaagag ttcttaactc taatgataaa agatctttca agatcaacaa tagttccctc
      121 acaccggtga ccgacaggtt tacgaccgta aggtttcaga acaacatcga aagcgtttac
      181 gccaacttcg actctcgact aaagtcgtcg tacgatggta gatctaaaaa gatcaagaat
      241 ctaagcctta aaaatcttag atgttacgaa gccttcctca ggaagtacct tctggaacaa
      301 taaatctctc tgagaatagt actctattga gtatccacag aaaaaataat cttctgtgtt
      361 gagatggatt tgtatccaga agaaaacacc caaagcgagc aatcgcataa ttctgaaaat
      421 aatatgcaaa tatttaagtc agaaaattcg gatggattct cctccgatct aatgatctca
      481 aacgatcaat taaaaaatat ctcaaaaacc caattaactt tggaaaaaga aaagatattt
      541 aaaatgccta acgttttgtc tcaagttatg aaaagagcgt ttagcaggaa aaacgagatt
      601 ctttactgcg tctcgacaaa agagttatca gtggacattc acgatgccac aggtaaggta
      661 tatcttccct taatcactag agaggagata aataaaagac tttcaagctt aaaacctgaa
      721 gtcagaaaga ccatgtccat ggttcatctt ggagcggtca aaatattgct taaagctcaa
      781 tttcgaaatg ggattgatac cccaatcaaa attgctttaa tcgatgatag aattaattct
      841 agaagagatt gccttctcgg tgcagccaaa ggtaatctag catacggtaa gtttatgttt
      901 actgtatacc ccaagtttgg aataagcctt aatacccaaa gacttaacca aaccctaagc
      961 cttattcatg attttgaaaa taaaaatctt atgaataaag gtgataaagt tatgaccata
     1021 acctatatgg taggatatgc attaactaat agtcatcata gcatagatta tcaatcgaat
     1081 gctacaattg aactagaaga cgtatttcaa gaaattggaa atgtccacga gtctgatttt
     1141 tgtacaatac aaaatgacga atgcaattgg gccattgata tagcccaaaa caaagcctta
     1201 ttaggagcta aaaccaaatc ccaaattggt aataatcttc aaataggaaa cagtgcttca
     1261 tcctctaata ctgaaaatga attagctagg gtaagccaga acatagatct tttaaagaat
     1321 aaattaaaag aaatctgtgg agaataaaat gaggattacg ggtcaaccgc atgtttataa
     1381 aaaagatact attattagac taaaaccatt gtctcttaat agtaataata gaagttatgt
     1441 ttttagttcc tcaaaaggga acattcaaaa tataattaat catcttaaca acctcaatga
     1501 gattgtagga agaagcttac tcggaatatg gaagatcaat tcatacttcg gcttaagcaa
     1561 agacccttcg gagtccaaat caaaaaaccc gtcagttttt aatactgcaa aaaccatttt
     1621 taagagtggg ggggttgatt actcgagcca actaaaagaa ataaaatctc ttttagaagc
     1681 tcaaaatact agaattaaaa atctagaaaa agcaattcaa tccttagata ataagattga
     1741 accagagccc ttaactaaaa aagaagttaa agagctaaaa gaatcgatta actcgatcaa
     1801 agaaggatta aagaatatta ttggctgaaa tggctaatct taatcaaatc caaaaagaag
     1861 tctctgaaat cctcagtgac caaaaatcca tgaaatcgga tataaaagct atcttagaat
     1921 tactaggatc ccaaaatcct actaaagaaa gcttagaagc cgttgcagcg aaaatcgtta
     1981 atgacttaac caagctcatc aatgattgtc cttgtaacaa agagatatta gaagccttag
     2041 gtaatcaacc taaagagcaa ctaatagaac aacctaaaga aaaaggcaaa ggccttaatc
     2101 taggaaaata ttcttaccct aattacggtg taggaaatga agaattagga tcctctggaa
     2161 accctaaagc tttaacttgg cccttcaaag ctccagcagg atggccgaat caattttaga
     2221 caggaccatt aaccggttct ggtataatct gggagaagat tgtctctcgg aaagtcaatt
     2281 tgaccttatg ataaggttaa tggaagagtc ccttgacggg gaccaaatta ttgatctaac
     2341 ctctctacct agtgataatt tgcaggtcga acaggttatg acaactaccg acgactcgat
     2401 ctcggaagaa tcagaattcc ttctagcaat aggagaaaca tctgaagacg aaagcgattc
     2461 aggagaagaa cctgaattcg aacaagttcg aatggatcga acaggaggaa cggagattcc
     2521 caaaaaagaa gatggtgcag aaccatctag atataatgag agaaagagaa agaccacgga
     2581 ggaccggtac tttccaactc aaccaaagac cattccagga caaaaacaaa cgtctatggg
     2641 aatactcaac attgactgcc aaaccaatcg aagaacctta atcgatgact gggcagcaga
     2701 aatcggattg atagtcaaaa ccaacagaga agactatctt gatccagaaa caatactact
     2761 cctgatggaa cacaaaacat caggaatagc caaggagtta atccgaaata caagatggaa
     2821 ccgcactacc ggagatatca tagaacaggt gatcgatgcg atgtacacca tgttcttagg
     2881 actaaactac tccgacaaca aggttgctga aaagatagac gagcaagaga aggccaagat
     2941 cagaatgacc aagctccagc tctgcgacat ctgctacctt gaagaattta catgtgatta
     3001 tgagaagaac atgtacaaaa cggaactggc ggatttccca ggatatatca accagtacct
     3061 gtcaaaaatc cccatcattg gagaaaaagc gctaacacgc tttaggcatg aagctaacgg
     3121 aaccagcatc tacagcttag gtttcgcggc aaagatagta aaagaagaac tatctaaaat
     3181 ctgcgcatta tccaagaagc agaagaagtt gaagaaattc aacaagaaat gctgcagcat
     3241 cggcgaagct tcagtagaat atggatgcaa gaaaacatcc aagaagaagt atcataataa
     3301 gcgatacaag aaaaaatata aggtctataa accttataag aagaagaaga aattccgatc
     3361 cggaaaatac ttcaagccca aggagaagaa gggctcaaag caaaagtatt gcccaaaagg
     3421 caagaaagac tgcagatgtt ggatctcgaa cattgaaggc cattacgcca acgaatgtcc
     3481 taatcgacaa agctcggaga aggctcacat ccttcaacaa gcagagaaat tgggtctcca
     3541 gcccattgaa gaaccctatg aaggagttca agaagtattc atcttagaat acaaagaaga
     3601 ggaagaagaa acctctacag aagaaagtga tggatcatct acttctgaag actcagactc
     3661 agactgagca ggtgatgaac gtcaccaatc ccaattcgat ttacatcaag ggaagactct
     3721 acttcaaggg atacaagaag atagagcttc actgttttgt agacacggga gcaagcttat
     3781 gcatagcatc caagttcgtc attccagaag aacattgggt caatgcagaa agaccaataa
     3841 tggtcaaaat agcagatgga agttcaatca ccatcagcaa agtctgcaaa gacatagact
     3901 tgatcatagc gcgcgagata ttcaaaattc ccaccgtcta tcagcaagaa agtggcatcg
     3961 atttcataat cggcaacaac ttctgtcagc tatatgaacc attcatacag tttacggaca
     4021 gagttatctt cacaaagaac aagtcttatc ctgttcatat tgcgaagcta acaagagcag
     4081 tgcgagtagg caccgaagga tttcttgaat caatgaagaa acgttcaaag actcaacaac
     4141 ctgagccggt gaacatttcg acaaacaaga tagaaaatcc actaaaagaa attgctattc
     4201 tttcagaggg gaggaggtta tcagaagaaa aactcttcat cactcaacaa agaatgcaaa
     4261 aaatcgaaga actacttgag aaagtatgtt cagaaaatcc attagatcct aacaagacta
     4321 agcaatggat gaaagcttca atcaagctca gcgacccaag caaagctatc aaggttaaac
     4381 ccatgaagta tagcccaatg gatcgtgaag aatttgacaa gcaaatcaaa gagttactgg
     4441 accttaaagt cattaagccc agtaaaagcc ctcacatggc accagccttc ttggtcaaca
     4501 atgaagccga gaagcgaaga ggaaagaagc gtatggtagt taactacaag gctatgaaca
     4561 aagccaccat aggagacgca tacaatcttc ccaataaaga cgagttactg acacttattc
     4621 gaggaaagaa gatcttctct tccttcgact gcaagtcagg attctggcag gttctgctag
     4681 atcaagaatc aagacctcta acggcattca catgtcccca aggtcactac gaatggaatg
     4741 tggtcccttt cggcttaaag caggcaccat ccatattcca aagacacatg gacgaagcat
     4801 ttcgtgtgtt cagaaagttc tgttgcgttt atgtcgacga cattctcgta ttcagtaaca
     4861 atgaggaaga tcacctactt cacgtagcaa tgatcttaca aaagtgcaat caacatggaa
     4921 tcatcctttc caagaagaaa gcacaactct tcaaaaagaa gataaacttc cttggtctag
     4981 aaatagatga aggaacacat aagcctcaag gacatatctt ggaacatatc aacaaattcc
     5041 cagataccct tgaagacaag aagcaacttc agagattctt aggcatccta acatatgcct
     5101 ccgattatat cccgaagcta gctcaaatta gaaagcctct gcaagccaag cttaaagaaa
     5161 atgttccatg gaaatggaca aaagaggaca ccctctacat gcaaaaggtg aagaaaaatc
     5221 tgcaaggatt tcctccacta catcatccct taccagagga aaagctgatc atcgagaccg
     5281 acgcatcaga cgactactgg ggaggtatgt taaaagctat caaaattaac gaaggaacta
     5341 atactgagtt aatttgcaga tacgcatctg gaagctttaa agctgcagaa aggaattacc
     5401 acagcaatga caaagagaca ttggcggtaa taaatactat aaagaaattc agtatttatc
     5461 taactcctgt tcattttctg attaggacag ataatactca tttcaagagt tttgttaatc
     5521 ttaattacaa aggagattca aaacttggaa gaaacatcag atggcaagca tggcttagcc
     5581 actattcgtt tgatgttgaa catattaaag gaaccgacaa ccactttgcg gacttccttt
     5641 caagagaatt caacaaggtt aattcctaat tgaaatccga agataagatt cccacacact
     5701 tgtggctgat atcaaaaggc tactgcctat ataaacacat ctctggagac tgagaaaatc
     5761 agacctccaa gcatggagaa catagaaaaa ctcctcatgc aagagaaaat actaatgcta
     5821 gagctcgatc tagtaagagc aaaaataagc ttagcaagag ctaacggctc ttcgcaacaa
     5881 ggagacctct ctctccaccg tgaaacaccg gtaaaagaag aagcagttca ttctgcactg
     5941 gccactttta cgccaactca agtaaaggct attccagagc aaacggctcc tggtaaagaa
     6001 tcaacaaatc cgttgatggc tagtatcttg ccaaaagata tgaacccagt tcaaactggg
     6061 ataaggcttg cagtgccagg ggacttttta cgtcctcatc agggaattcc aatcccacaa
     6121 aaatctgagc ttagcagcac agttgttcct ctcagagacg aatcgggtat tcaacaccct
     6181 catatcaact actacgttgt gtataacggt ccacacgccg gtatatacga tgactggggt
     6241 tgtacaaagg cggcaacaaa cggcgttccc ggagttgcac acaagaagtt tgccactatt
     6301 acagaggcaa gagcagcagc tgacgcgtac acaacaagtc agcaaacaga caggttgaac
     6361 ttcatcccca aaggagaagc tcaactcaag cccaagagct ttcgagaggc cttaaccagc
     6421 ccaccaaagc aaaaagccca ctggctcacg ctaggaacca aaaggcccag cagtgatcca
     6481 gccccaaaag agatctcttt tgccccggag atcaccatgg acgactttct ctatctctac
     6541 gatctaggaa gaaagttcga cggagaaggt gacgatacca tgttcaccac tgataatgag
     6601 aagattagcc tcttcaattt cagaaagaat gctgacccac agatggttag agaggcctac
     6661 gcagcaggtc tcatcaagac gatctacccg agtaataatc tccaggagat caaatacctt
     6721 cccaagaagg ttaaagatgc agtcaaaaga ttcaggacta actgcatcaa gaacacagag
     6781 aaagatatat ttctcaagat cagaagtact atcccagtat ggacgattca aggcttgctt
     6841 cataaaccaa ggcaagtaat agagattgga gtctctaaga aagtagttcc tactgaatca
     6901 aaggccatgg agtcaaaaat tcagatcgag gatctaacag aactcgccgt gaagactggc
     6961 gaacagttca tacagagtct tctacgactc aatgacaaga agaaaatctt cgtcaacatg
     7021 gtggaagatg acactctcgt ctactccaag aatatcaaag atacagtctc agaagaccaa
     7081 agggctattg agacttttca acaaagggta atatcaggaa acctcctcgg attccattgc
     7141 ccagctatct gtcacttcat cgaaaggaca gtagaaaagg aaggtggctc ctacaaagtc
     7201 catcattgcg ataaaggaaa ggctatcgtt caagatgcct ctgccgacag tggtcctaaa
     7261 gatggacccc cacccacgag gagcatcgtg gaaaaagaag acgttccaac cacgtcttca
     7321 aagcaagtgg attgatgtga tatctccact gactgaaggg atgacgcaca atcccactat
     7381 ccttcgcaag acccttcctc tatataagga agttcatttc atttggagag gacacgctga
     7441 aatcaccagt ctctctctac aaatctatct ctctctattt tctccataat aatgtgtgag
     7501 tagttcccag ataagggaat tagggttctt atagggtttc gctcatgtgt tgagcatata
     7561 agaaactctt agtatgtatt tgaatttgta aaatacttct atcaataaaa tttctaattc
     7621 ctaaaaccaa aatccagtac taaaagccag atctcctaaa gtccctatag atctttgtgg
     7681 tgaatataaa ccagacacga gacgactaaa cctggagccc agatgccgtt tgaagctaga
     7741 agtaccgctt aggcaggagg ccgttaggga aaagatgcta aggcagggtt ggttacgttg
     7801 actcccccgt agggttggtt taaatatcat gaagtggact gaagaaagaa ggaagacatg
     7861 gaaggataag gttgcaggcc ctgtgcaagg taagaagatg gaaatttgat agaggtacgc
     7921 tactatactt atactatacg ctaagagaat gcttgtattt ataccctata ccccctaata
     7981 accccttatc aatttaaaga aataatccgc ataagccccc gcttaaaaaa tt
//