From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Gallid herpesvirus US8 gE homologue gene (3'end) and terminal end
Date: 26 Jan 93 05:47:32 GMT
Distribution: bionet
Checksum: 17004 4

LOCUS       HSMHOTSPOT   1667 bp ds-DNA             VRL       25-JAN-1993
DEFINITION  Gallid herpesvirus US8 gE homologue gene (3'end) and terminal end
            of the unique short repeat region.
ACCESSION   L09061
KEYWORDS    US8 gene; repeat region; short unique region.
SOURCE      Gallid herpesvirus type 1 (strain JM) DNA.
  ORGANISM  Gallid herpesvirus type 1
            Viridae; ds-DNA enveloped viruses; Herpesviridae;
            Gammaherpesvirinae.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Jones,D., Isfort,R., Witter,R., Kost,R. and Kung,H.-J.
  TITLE     Retroviral insertions into a herpesvirus genome are clustered at
            the RS/US junctions.
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_region   order(903..925,955..978)
                     /rpt_type=direct
                     /note="region of sequence variablilty in GA, JM, Md11 and
                     Md5"
     polyA_signal    one-of(65..70,213..218,238..243,535..540,658..663,
                     755..760,1289..1294)
     repeat_region   1..754
                     /note="terminal region of short unique region"
     misc_feature    755..1667
                     /note="junction of terminal short repeat region"
     repeat_region   840..1058
                     /note="
                     200 base pair repeat amplified in Md11 strain"
     repeat_unit     903..925
     repeat_unit     955..978
     CDS             <1..6
                     /note="US8 MDV gE homolog"
                     /codon_start=1
                     /translation="H"
BASE COUNT      475 a    394 c    340 g    458 t
ORIGIN      
        1 cactgatatg tacatattta aacttaatgg gatatagtat atggacgtct atatgacgag
       61 agtaaataaa ctgacactgc aaatgaagct gatctatatt gtgctttata ttgggacaaa
      121 ccactcgcac aagctcattc aacacatcac tcttgctatt aaattcccca ttatataaca
      181 atactgacat aacactcata ttaaggggag aaaataaata tgcatggccg atcatatttt
      241 attgagatcc gaaaatatat catgcaaata agcatgttct agcaccactg caacatgtgg
      301 tttatcgatt tccggaaaga atagttgaac cattgcctcc gagcagttgg cgatctactt
      361 ccgcagcctt cgaaatatat ctcatagaac tcttccttaa aactgcacgg agattttcca
      421 tcctccttag aagccttgca gacaaaagcc aatttctctt caacggccag ggacgggcaa
      481 tcgcgataca tttcacgcat ggatccatgt cccctggagt tggaagagtt atagtttatt
      541 tatccaagtt aattttcgtc agcacatagc taaaattgaa ttacttacat cgagcttaat
      601 tcgtcgaaca tacaactatg atgacaagca gaagtaacca ggacagcttc atgttaaaat
      661 aaactgtaaa tcattcaatg ataatgggag aagaatgtga gcaaggatcc atggtgtctg
      721 ctttttatag tatctaccgc aatgctacat ataaaataaa aatatacctc tacccaaaaa
      781 tgggcggtat gagatgcacg gggaaaatac gcagctgttc tcatatcccc tgaaccgtac
      841 tctttttccc ctctccgccc cgcggacccc gaggcctcgt ggggcaccta tttgcgcgga
      901 ggaaggcacg gttccttttt tttttggggg gggggggacc catctgcgta gagaaaggca
      961 cggttcctct ttttttttcc cctacaacat ctcgtttgca tatgcaagct ctgagaactt
     1021 ccctctacct caaagcgccg tagggaactg aggtctaata ttcaatccta ggccactcgc
     1081 caatataaga gggacttccc cccgcctata gagaggttaa cccaggagac acgctgtggt
     1141 tagctcgtcg attcagtatt tcctcttcga cagggccgcg cttttttggt cgcggtttgt
     1201 ctgagacttg tacgaaaaga ctagtcccat agcttcgtta acacttgcga tataaaaaaa
     1261 aagagaactc gttaggccac aaatctattt tattggttcg cgacaagata acacactccc
     1321 cctccccctt tcccctgttc aagtcaggaa acccgtcgga agattgattc tcaaatccaa
     1381 ttcggcgagc atgtaagacc ccggccaatc gtacagaacc ccgagttttg tttacttgca
     1441 gatatgcacc gcccttcctt gacgtggcaa acaaactaag ctgtgtttat ataaaacggc
     1501 accccaccca tatactgtat acttgtacat ccagtggttt ttttatgtgg ggagggagaa
     1561 gaacaaatta aaacattgca cttgcctggg ctacaattcc cttttggctc gagctatgtc
     1621 ggagagtccc ggtggacccg cggttgtgct ttgggctgaa ggaattc
//