From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Infectious bursal disease virus polyprotein (encoding VP2 and VP4)
Date: 26 Jan 93 05:48:12 GMT
Distribution: bionet
Checksum: 09469 5

LOCUS       IBDVP2       1854 bp ds-RNA             VRL       25-JAN-1993
DEFINITION  Infectious bursal disease virus polyprotein (encoding VP2 and VP4)
            mRNA, 5' end.
ACCESSION   M64285
KEYWORDS    .
SOURCE      Infectious bursal disease virus (variant A isolate), cDNA to viral
            RNA.
  ORGANISM  Infectious bursal disease virus
            Viridae; ds-RNA nonenveloped viruses; Birnaviridae.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Lana,D.P., Beisel,C.E. and Silva,R.F.
  TITLE     Genetic mechanisms of antigenic variation in infectious bursal
            disease virus: Analysis of a naturally occurring immunogenically
            variant virus
  JOURNAL   Virus Genes 6, 247-259 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    60..1568
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="VP2"
     misc_feature    1569..1854
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="VP4"
     mat_peptide     60..1568
                     /product="VP2"
                     /gene="VP2"
                     /codon_start=1
                     /note="VP2/VP4 is a polyprotein that is proteolitically
                     cleaved. The 3' end of VP2 is a proposed cleavage site.;
                     putative"
     mat_peptide     1569..1854
                     /product="VP4"
                     /gene="VP4"
                     /codon_start=1
                     /partial
                     /note="putative"
     CDS             60..>1854
                     /product="polyprotein"
                     /codon_start=1
                     /translation="MTNLQDQTQQIVPFIRSLLMPTTGPASIPDDTLEKHTLRSETST
                     YNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQNLPASYNYCRLV
                     SRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLV
                     GEGVTVLSLPTSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSS
                     QYQQGGVTITLFSANIDAITSLSVGGELVFKTSVQSLVLGATIYLIGFDGTAVITRAV
                     AANNGLTAGIDNLMPFNLVIPTNEITQPITSIKLEIVTSKSDGQAGDQMSWSASGSLA
                     VTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDP
                     GAMNYTKLILSERDRLGIKTVWPTREYTDFREYFMEVADLNSPLKIAGAFGFKDIIRA
                     IRRIAVPVVSTLFPPAAPLAHAIGEGVDYLLGDEAQAASGTARAASGKARAASGRIRQ
                     LTLAADKGYEVVANLFQVPLNPVVDGILASPGILRGAHNLDCVLREGATLFPVVITTV
                     EDAMTPKALNSKMFAVIEGVREDLQPPSQRGS"
BASE COUNT      491 a    503 c    474 g    386 t
ORIGIN      
        1 tcctccttct acaacgctac cattgatggt tagtagagat cagacaaacg atcgcagcga
       61 tgacaaacct gcaagatcaa acccaacaga ttgttccgtt catacggagc cttctgatgc
      121 caacaaccgg accggcgtcc attccggacg acaccctgga gaagcacact ctcaggtcag
      181 agacctcgac ctacaatttg actgtggggg acacagggtc agggctaatt gtctttttcc
      241 ctggattccc tggctcaatt gtgggtgctc actacacact gcagagcaat gggaactaca
      301 agttcgatca gatgctcctg actgcccaga acctaccggc cagctacaac tactgcaggc
      361 tagtgagccg gagtctcaca gtaaggtcaa gcacactccc tggtggcgtt tatgcactaa
      421 acggcaccat aaacgccgtg accttccaag gaagcctgag tgaactgaca gatgttagct
      481 acaatggatt gatgtctgca acagccaaca tcaacgacaa aattgggaac gtcctagtag
      541 gggaaggggt caccgtcctc agcttaccca catcatatga tcttgggtat gtgagacttg
      601 gtgaccccat acccgctata gggcttgacc caaaaatggt agcaacatgt gacagcagtg
      661 acaggcccag agtctacact ataactgcag ccgatgatta ccaattctca tcacaatacc
      721 aacaaggtgg ggtaacgatc acactgttct cagccaacat tgatgccatc acaagcctca
      781 gcgttggggg agagcttgtg tttaaaacaa gcgtccaaag ccttgtactg ggcgccacca
      841 tctaccttat aggctttgat gggactgcgg taatcactag agctgtagcc gcaaacaatg
      901 ggctgacggc cggcatcgac aatcttatgc cattcaatct tgtgattcca accaacgaga
      961 taacccagcc gatcacatcc atcaaactgg agatagtgac ctccaaaagt gatggtcagg
     1021 caggggatca gatgtcatgg tcggcaagtg ggagcctagc agtgacgatc catggtggca
     1081 actatccagg ggccctccgt cccgtcacac tagtagccta cgaaagagtg gcaacaggat
     1141 ctgtcgttac ggtcgccggg gtgagcaact tcgagctgat cccaaatcct gaactagcaa
     1201 agaacctggt tacggaatac ggccgatttg acccaggggc catgaactac acaaaattga
     1261 tactgagtga gagggaccgt cttggcatca agaccgtctg gccaacaagg gagtacacag
     1321 actttcgtga gtacttcatg gaggtggccg acctcaactc tcccctgaag attgcaggag
     1381 catttggctt caaagacata atccgggcca taaggaggat agctgtgccg gtggtctcta
     1441 cattgttccc acccgccgct cccctagccc atgcaattgg ggaaggtgta gactacctgc
     1501 tgggcgatga ggcacaggct gcttcaggaa ccgctcgagc cgcgtcagga aaagcaaggg
     1561 ctgcctcagg ccgcataagg cagctgaccc tcgccgccga caaggggtac gaggtagtcg
     1621 cgaatctatt ccaggtgcct ctgaatcccg tagttgatgg gattcttgct tcacccggga
     1681 tactccgcgg tgcacacaac ctcgactgcg tgttaagaga gggtgccacg ctgttccctg
     1741 tggtcattac gacagtggaa gacgccatga cacccaaagc actgaacagc aaaatgtttg
     1801 ctgtcattga aggcgtgcga gaagacctcc aacctccatc tcaaagagga tcct
//