From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: R.leguminosarum nodD2, nodD3 and nolP genes
Date: 3 Jan 93 22:19:04 GMT
Distribution: bionet
Checksum: 04937 7

LOCUS       RHMNODD6     3016 bp ds-DNA             BCT       23-DEC-1992
DEFINITION  R.leguminosarum nodD2, nodD3 and nolP genes
ACCESSION   X54215
KEYWORDS    nod-box; nodD2 gene; nodD3 gene; nolP gene.
SOURCE      Rhizobium leguminosarum DNA.
  ORGANISM  Rhizobium leguminosarum
            Prokaryotae; Gracilicutes; Scotobacteria; Rhizobiaceae.
REFERENCE   1  (bases 1 to 3016)
  AUTHORS   Davis,E.O. and Johnston,A.W.
  TITLE     Analysis of three nodD genes in Rhizobium leguminosarum biovar
            phaseoli; nodD1 is preceded by nolE, a gene whose product is
            secreted from the cytoplasm
  JOURNAL   Mol. Microbiol. 4, 921-932 (1990)
  STANDARD  full automatic
COMMENT     *source: strain=biovar: phaseoli;
               From EMBL    entry RLNODD2;  dated 14-DEC-1992.
FEATURES             Location/Qualifiers
     protein_bind    626..644
                     /bound_moiety="nodD protein"
     protein_bind    647..669
                     /bound_moiety="nodD protein"
     CDS             complement(14..301)
                     /gene="nolP"
                     /codon_start=1
                     /translation="MKRSTRLKALEEENATLKRLLAEQILDTAPLPELLKKIERPAAK
                     RDAVARQKAVVGLSERSRSPDCRLAFSAIEMPSSGRRPRYSPRDRQSGCRH"
     CDS             677..1633
                     /gene="nodD2"
                     /codon_start=1
                     /translation="MRFKGLDLNLLVALDALTTERNLTAAARSINLSQPAMSAAIGRL
                     RDYFRDELFTMNGRELRLTPRAEGLASAVRETLLQVQCSIISWEPFNPSKSDRCFRIV
                     LSDFMMLIYFNKIIERVAREAPAVSFELLPLDSDPYEMLSRGDVDFLIVPEFFLSGAH
                     PSAKLFTEKFVCVACSTNVDLPSALTIEQYVSTGHVAAAFGRFLKPSVEGWFLLENGI
                     QRRVEVVVQGFSLIPPVLRGTNRIANLPLRLVEHYESTFPLRIINLPLPLPVFTEAVQ
                     WPALHNADPGSIWFREILVEEASRMMSSNAPKIHGLLQQSGS"
     CDS             complement(2042..2950)
                     /gene="nodD3"
                     /codon_start=1
                     /translation="MRFKGLDLNLLVALDALMIERNLTAAARSINLSQPAMSAAVRRL
                     RSYFRDELFTMRGREFVPTPRAEDLAPAIREALQHIRLNIIPWDKFTPDQSDRHFRVS
                     LCDFVTVVLFQKILERLAREAPGISFDLLPLTDNPDELLRRGDVDFLISPPLFMSSAH
                     PKIDLFQERLTCVGCSNNKQLEEALTAEEYSSMGHAVVRFGRTQQPTIEDCFLQEHGL
                     KRRVEVVVSSFSMIPAALMGTDRIATVPLRLVGLFEDTIPLRMTAPPIALPTFTEAVQ
                     WPVLHDKDPANIWMRDIMVQEAARLP"
BASE COUNT      684 a    802 c    791 g    739 t
ORIGIN      
        1 gaattcttag cttttaatga cggcaaccgc tttgacgatc ccgaggcgag taacgcggac
       61 gccgaccgga tgacggcatc tcgatagcgg agaacgcaag gcggcagtcg ggcgacctac
      121 ttcgttccga aaggcccacg acggctttct ggcgtgcgac ggcgtcgcgc ttggcggcgg
      181 gcctttctat ttttttaagg agctcgggaa gtggggccgt atccaggatc tgctcggcga
      241 gcagtctctt cagtgtggcg ttctcttcct caagcgcctt caggcgcgtt gatcttttca
      301 tcacaaatta ctggcacgcc accaatatct tgaacatgct tccaaacaga aggagcccgc
      361 cagtcgatag ccagcgtacg gcaaagcctc tccggtatcg cgatatgatg aacctacttc
      421 cgcccatccg ttcactagca tttcatgtcg ctcggtgacg ccgctccaca tcgcctattg
      481 ctaaggtgcc attcgatatt taaagtggat tatctgcaac tataacgtct atcgtaacta
      541 tgcggcctac ttaattgatc accaaactaa cctaagcctt ttcgacgaac cttcattgga
      601 tctatgctgg aaggttctgt actggaaaaa tcgattgttt ggatataaaa tatccgttgt
      661 ttggatgtga ctaaagatgc gtttcaaggg ccttgatcta aacctgctcg ttgcattgga
      721 tgcgctcacg accgagcgca acctaacggc tgccgcacgt agtatcaatc taagtcaacc
      781 agcaatgagt gccgccattg gtaggcttcg ggactatttc cgcgacgaat tgtttacaat
      841 gaatggtcga gaacttcggc tgacgccccg tgccgaagga cttgcctcgg cagtgcgtga
      901 aactctcttg caggtacaat gctcaatcat ctcttgggag ccgtttaacc cgtcgaagtc
      961 tgacagatgc tttagaatag ttctgtccga tttcatgatg ctgatatact tcaataaaat
     1021 cattgagcga gttgctcgag aagcgcccgc agtcagcttt gagttgctgc ctttggatag
     1081 tgatccgtac gagatgctta gccgcggtga cgtcgacttc ctcatcgtgc ctgaattttt
     1141 tctctcgggc gcacacccga gcgcaaaact gttcacagag aagtttgtat gtgtagcctg
     1201 ttcgacaaat gtggacctac cttcagcgct gacgatcgag caatatgtct ccacgggaca
     1261 cgtcgctgcc gcgtttgggc gctttttgaa gccatcggtc gagggctggt tcttgctcga
     1321 gaatggtatt cagaggcggg tggaggtcgt cgtgcaaggg tttagcttaa taccaccagt
     1381 cctgcgtggc acgaaccgca tagctaacct accgcttcgc ttagtcgagc attacgaaag
     1441 tactttccct ttgcggatca tcaaccttcc gttaccgctc cccgtcttca cagaagctgt
     1501 tcaatggcca gcgctccata atgccgatcc agggagcatc tggttcaggg agatattggt
     1561 tgaggaagct tcccgtatga tgtcctccaa cgcacctaaa atacatgggt tgctacaaca
     1621 atccggttcc tgaccaaggt tcctgcttga gtaagatccg cccgagcccg aataagttca
     1681 acagccacca aagaggcttt tcaaaggtat ccatccgggg aaggcccgct gaccttgccc
     1741 ccaagtttta tccagttttg agttcgctcc gacggttttg ggttgctgta tttgcggcgg
     1801 tagcggcggg ttgcggtgcg gagcaattgt ggtcccccag cacccttcga tttgccgccg
     1861 aaggtgctag acagcacgtc gcgcaatcgt ccgaagggcg gccgatcggc gacgggcgta
     1921 gcgctcagct tcgtcgataa aatggcctgc gggtcactca caggtggtgc cgtcttcagc
     1981 taatcggccg cgtcgcggtc gtcgctccca atgcagccca gcttcctagg tttcaggatg
     2041 gtcacggcaa tcgcgctgcc tcctgaacca ttatatctcg catccagata tttgccggat
     2101 ctttgtcgtg aagtaccggc cattggactg cctcggtgaa tgtcggcagc gctatcgggg
     2161 gcgcagtcat ccgcaatggt atcgtgtcct caaaaagccc aactagtcgt aacggaacgg
     2221 ttgcgatgcg atcggtgccc attagggcgg cggggatcat gctaaagctt gaaacaacga
     2281 cttcgacccg cctcttgagg ccatgctcct gcaagaagca atcttctatg gtaggctgct
     2341 gcgtccgacc gaacctaact accgcgtgcc ccattgaaga atactcctcg gcagtaaggg
     2401 cttcctcaag ttgtttgtta ttactgcagc cgacgcaagt cagtcgttcc tgaaatagat
     2461 ctatcttagg gtgcgcgctc gacatgaata gcggtgggct aataaggaag tctacgtcgc
     2521 cgcgtcgcaa aagctcgtct ggattgtcag taagaggcag caagtcaaaa ctaatgccgg
     2581 gtgcttcccg cgcaagacgc tccagtatct tctgaaaaag aacaactgta acgaaatcgc
     2641 ataagcttac tcggaaatga cgatctgatt gatcaggagt aaatttatcc cagggtatga
     2701 tattgagccg aatatgctgt aaagcctcac gaatcgcagg cgcgaggtct tccgcacgcg
     2761 gagttggaac gaactcacga ccacgcatcg taaatagttc atcgcggaaa taggagcgga
     2821 gccggcggac agctgcactc attgcgggct ggctcagatt aatgctacgt gccgccgcag
     2881 taaggttgcg ctcaatcatt agtgcatcga gcgcgacaag gagatttaga tcgaggccct
     2941 taaatcgcat atcttttaac tatccaatag tgcagcccat tccacaatgg ctgttcctac
     3001 ggcgatggct gaattc
//