From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Streptomyces aureofaciens principal sigma-like factor (hrdA) gene,
Date: 28 Jan 93 05:48:50 GMT
Distribution: bionet
Checksum: 35993 4

LOCUS       STMHRDA      1625 bp ds-DNA             BCT       27-JAN-1993
DEFINITION  Streptomyces aureofaciens principal sigma-like factor (hrdA) gene,
            complete cds.
ACCESSION   M90410 M64433
KEYWORDS    principal sigma-like factor; rpoD homologue.
SOURCE      Streptomyces aureofaciens (strain CCM 3239) DNA.
  ORGANISM  Streptomyces aureofaciens
            Prokaryotae; Firmicutes; Streptomycetaceae.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Kormanec,J., Farkasovsky,M. and Potuckova,L.
  TITLE     Four genes in Streptomyces aureofaciens containing a domain
            characteristic of principal sigma factors
  JOURNAL   Gene 122, 63-70 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     RBS             348..353
                     /gene="hrdA"
     repeat_unit     596..613
                     /rpt_type=INVERTED
                     /gene="hrdA"
     repeat_unit     1560..1595
                     /rpt_type=INVERTED
                     /gene="hrdA"
     CDS             361..1542
                     /gene="hrdA"
                     /product="principal sigma-like factor"
                     /codon_start=1
                     /translation="MQTQTLTVNVSRPVSDTAGASGTARTAAAPEARRTDEPVDEAVD
                     EAADPAARAAGDETAEDEGPDEGPEVLELIEHVPPPRTRGAESGGAGPSADLFRQYLR
                     EIGRIPLLTAAEEVDLARRVEAGLFAEEKLGGAADLDSQLAVDLDRLVVMGRMAKRRL
                     IESNLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQ
                     AMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTAEEVAVHLELTPERVL
                     EVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFFLRCEHLEAVLSTLGE
                     RERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYL
                     D"
BASE COUNT      246 a    600 c    567 g    212 t
ORIGIN      
        1 agcctctcgt gacccgtccg gtcgggcagt gtcagcatcg aacgggagcg cgcccggccc
       61 cgggccggtg tgatgtgcgt gaccttcaac tcccgtgccc cggcccatga ttcgagccgg
      121 gccagctccg ccgcgtccgg acacaggacc gtcacgtggg tttcgtaggt tccgtacgaa
      181 gacatgatgt cgatcatctc ggacatgcgt ccgatccgca tcggggttcc cggcgggggg
      241 taaccatccg gtcacgcacc ggactcagaa agtgctcgca cgcccctcgt ggcggcgatg
      301 tgtcgtaccc cacactgagg tgcggtgctt gagtcctcgc cagccctgga ggtcgccccc
      361 gtgcagaccc agaccctgac cgtgaacgtg agccggcccg tcagcgacac cgccggagcg
      421 agcggcacgg cccggaccgc cgccgctccg gaggcccgaa ggacggacga gcccgtggac
      481 gaggccgtgg acgaagcggc ggatccggcg gcccgggcgg ccggggacga gacggccgag
      541 gacgaggggc ccgacgaggg gcccgaggtc ctggaactga tcgagcacgt gcccccgccg
      601 cggacccgcg gcgcggagag cggcggagcc ggaccctccg cggacctctt ccggcagtac
      661 ctgcgcgaga tcggcaggat cccgctgctc accgccgcgg aggaggtcga cctcgcacgg
      721 cgggtggagg ccggcctctt cgccgaggag aagctcggcg gggcagccga cctcgactcc
      781 cagctcgccg tggacctcga ccggctcgtc gtcatgggcc ggatggccaa acgccggctg
      841 atcgaatcga acctgcgtct ggtcgtctcc gtcgccaagc gctacgtcgg acgcggcctc
      901 accatgctcg acctggtcca ggagggcaac ctcggactga tccgggccgt cgagaagttc
      961 gactacgccc gcggctacaa gttctccacc tacgccacct ggtggatccg ccaggcgatg
     1021 tcacgggccc tggccgacca ggctcgcacc atccgcgtgc ccgtccacgt cgtcgagctg
     1081 atcaaccgcg tcgtgcgcgt ccagcgccgc atgctccagg agcgcggcta cgagcccacc
     1141 gccgaagagg tcgccgtcca cctggagctg acccccgagc gggtgctgga ggtgctgcgc
     1201 ctcgcgcagg agccggtctc cctgcacgca ccggtcggcg aggaggacga cgtggccctc
     1261 ggcgacctca tcgaggacgg cgacgccgcc tccccggtgg agtccgccgc gttcttcctg
     1321 cgctgcgagc acctggaagc cgtgctgtcg accctcgggg aacgcgagcg caaggtggtc
     1381 cagctccgct acgggctcgc cgacgggcgg ccgcgcaccc tggaggagat cgggcggatc
     1441 ttcggcgtga cccgtgagcg gatccgccag atcgagtcca agaccctcaa caaactgcgc
     1501 gaccacgcct tcgccgacca gctgcgcggc tacctggact gaccggcccg cccggacgcg
     1561 cggaaggggg cgccccgagg gacgccccct tccgccacga cggcgccgcg ccgcggctag
     1621 tcgac
//