From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mouse endogenous MuLV ecotropic loci putative (pbs and pol) genes,
Date: 6 Nov 92 18:08:04 GMT
Distribution: bionet
Checksum: 22498 14

LOCUS       MUSPOGAEN    8259 bp ds-DNA             ROD       28-OCT-1992
DEFINITION  Mouse endogenous MuLV ecotropic loci putative (pbs and pol) genes,
            partial cds; putative (gag and env) genes, complete cds.
ACCESSION   M87550
KEYWORDS    .
SOURCE      Mus musculus (individual_isolate pSR3, strain RF/J, sub_species
            domesticus) ovary DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 8259)
  AUTHORS   Nouvel,P., Philippe,H., Condamine,H. and Panthier,J.J.
  TITLE     Origin of MuLV ecotropic Loci : Molecular evidence for recent germ
            line infection events
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    2237..5842
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="pol"
     CDS             144..161
                     /gene="pbs"
                     /note="putative"
                     /codon_start=1
     CDS             2237..5842
                     /gene="pol"
                     /note="putative"
                     /codon_start=1
     CDS             638..2251
                     /note="putative"
                     /gene="gag"
                     /codon_start=1
                     /translation="MGQTVTTPLSLTLEHWKDVQRIASNQSVDVKKRRWVTFCSAEWP
                     TFGVGWPQDGTFNLDIILQVKSKVFSPGPHGHPDQVPYIVTWEAIAYEPPPWVKPFVS
                     PKLSPSPTAPILPSGPSTQPPLRSALYPALTPSIKPRPSKPQVLSDNGGPLIDLLSED
                     PPPYGGQGLSSSDGDGDREEATSTSEIPAPSPIVSRLRGKRDPPAADSTTSRAFPLRL
                     GGNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTL
                     LTGEEKQRVLLEARKAVRGNDGRPTQLPNEVDAAFPLERPDWDYTTQRGRNHLVLYRQ
                     LLLAGLQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNV
                     SMSFIWQSAPDIGRKLERLEDLKSKTLGDLVREAERIFNKRETPEEREERVRRETEEK
                     EERRRAEEEQKEKERDRRRHREMSKLLATVVSGQRQDRQGGERRRPQLDKDQCAYCKE
                     KGHWAKDCPKKPRGPRGPRPQTSLLTLDD"
     CDS             5728..7776
                     /note="putative"
                     /gene="env"
                     /codon_start=1
                     /translation="MDTRRPRQGSDHAPNKTIMESTTLSKPFKNQVNPWGPLIVLLIL
                     GGVNPVTLGNSPHQVFNLTWEVTNGDRETVWAITGNHPLWTWWPDLTPDLCMLALHGP
                     SYWGLEYRAPFSPPPGPPCCSGSSDSTPGCSRDCEEPLTSYTPRCNTAWNRLKLSKVT
                     HAHNGGFYVCPGPHRPRWARSCGGPESFYCASWGCETTGRASWKPSSSWDYITVSNNL
                     TSDQATPVCKGNEWCNSLTIRFTSFGKQATSWVTGHWWGLRLYVSGHDPGLIFGIRLK
                     ITDSGPRVPIGPNPVLSDQRPPSRPRPTRSPPPSNSTPTETPLTLPEPPPAGVESRLL
                     NLVKGAYQALNLTSPDKTQECWLCLVSGPPYYEGVAVLGTYSNHTSAPANCSVASQHK
                     LTLSEVTGQGLCIGAVPKTHQVLCNTTQKTSDGSYYLAAPTGTTWACSTGLTPCISTT
                     ILDLTTDYCVLVELWPRVTYHSPSYVYHQFERRAKYKREPVSLTLALLLGGLTMGGIA
                     AGVGTGTTALVATQQFQQLQAAMHDDLKEVEKSITNLEKSLTSLSEVVLQNRRGLDLL
                     FLKEGGLCAALKEECCFYADHTGLVRDSMAKLRERLSQRQKLFESQQGWFEGLFNKSP
                     WFTTLISTIMGPLIILLLILLFGPCILNRLVQFIKDRISVVQALVLTQQYHQLKTIDE
                     "
BASE COUNT     2108 a   2389 c   2009 g   1753 t
ORIGIN      
        1 gcgccagtcc tccgataact gagtcgcccg ggtacccgtg tatccaataa agccttttgc
       61 tgttgcatcc gaatcgtggt ctcgctgatc cttgggaggg tctcctcaga gtgattgact
      121 gcccagcctg ggggtctttc atttgggggc tcgtccggga tctggagacc cccgcccagg
      181 gaccaccgac ccaccgtcgg gaggtaagct ggccagcgat cgttttgtct ccgtctctgt
      241 ctttgtgcgt gtgtgtgtgt gtgccggcat ctactttttg cgcctgcgtc tgattctgta
      301 ctagttagct aactagatct gtatctggcg gctccgtgga agaactgacg agttcgtatt
      361 cccgaccgca gccctgggag acgtctcaga ggcatcgggg gcccgctggg tggcccaatc
      421 agtaagtccg agtcctgacc gattcggact atttggggcc cctcctttgt cggaggggta
      481 cgtggttctt ttaggagacg agaggtccaa gccctcgccg cctccatctg aatttttgct
      541 ttcggttttt cgccgaaacc gcgccgcgcg tcttgtctgt ctcagtattg ttttgtcatt
      601 tgtctgttcg ttattgtttt ggaccgcttc taaaaacatg ggacagaccg taaccacccc
      661 tctgagtctg accctagaac actggaaaga tgtccagcgc atcgcgtcca atcagtccgt
      721 agatgtcaag aagagacgct gggtcacctt ctgctctgcc gagtggccaa ctttcggtgt
      781 agggtggcca caagatggta cttttaattt ggacattatt ctacaggtta aatctaaggt
      841 gttctctcct ggtccccacg gacacccgga tcaggtccca tatattgtca cctgggaggc
      901 tattgcctat gaaccccctc cgtgggtcaa accttttgtc tctcccaaac tctccccctc
      961 tccaaccgct cccatcctcc catccggtcc ttcgacccaa cctccgctcc gatctgccct
     1021 ttaccctgct cttaccccct ctataaaacc cagaccttct aaacctcagg ttctctccga
     1081 taatggcgga cctctcattg accttctctc agaagaccct ccgccgtacg gaggacaggg
     1141 actgtcctcc tctgacggag atggcgacag agaagaggcc acctccactt ctgagattcc
     1201 tgccccctct cccatagtgt ctcgcctgcg gggcaaaaga gacccccccg cggcagattc
     1261 caccacctct cgggctttcc cactccgttt ggggggtaat ggtcagttgc agtactggcc
     1321 gttttcctcc tctgatctat ataactggaa aaataataat ccttccttct ctgaggatcc
     1381 aggtaaactg actgcattga ttgaatccgt cctcaccacc caccagccca cctgggatga
     1441 ttgccagcaa ttattaggga ctctgcttac cggggaggag aagcagcggg tgctcctgga
     1501 agcccgaaag gctgtccggg gcaacgatgg gcgccccacc caactgccca acgaggttga
     1561 cgctgctttt ccccttgaac gtcccgattg ggattacacc acccaaagag gtaggaacca
     1621 cctagttctc tatcgccagt tgcttttagc aggtctccaa aacgcgggcc gaagccccac
     1681 caatttggcc aaggtaaaag gaataaccca gggacctaat gagtccccct cagccttcct
     1741 agagagactc aaggaagcct atcgcagata cactccttat gatcctgagg accctgggca
     1801 agaaacaaat gtatctatgt cattcatctg gcagtccgct ccagacattg gtcgaaagtt
     1861 agagcggtta gaagacttaa aaagtaaaac tttaggagat ttagtgagag aagccgaaag
     1921 gatctttaat aaaagagaaa ctccagaaga aagagaagag cgcgttagaa gggagacaga
     1981 ggaaaaggaa gagcggcgta gggcagaaga ggagcagaaa gagaaagaga gggaccgtag
     2041 gagacataga gaaatgagca aacttttggc caccgtagtt agtggacaga gacaggatag
     2101 acagggggga gagcgaagga ggccccaact tgacaaggat caatgtgcct actgtaaaga
     2161 aaaaggacac tgggctaaag actgcccaaa gaagccacgg ggtccccgag gacccagacc
     2221 ccagacctcc ctcctgactt tagacgacta ggggggtcag ggtcaggagc ccccccctga
     2281 acccaggata accctcactg tcggggggca acccgtcacc ttcctggtgg atactggggc
     2341 ccaacactcc gtgctgactc aaaatcctgg gcccctaagt gacaggtcgg cttgggtcca
     2401 aggggctact ggaggaaagc ggtatcgctg gaccacagat cgcaaggtac acctagctac
     2461 cggtaaggtc actcactctt tcctccatgt gccagactgc ccctacccct tgctaggaag
     2521 agacttgtta actaaactaa aagcccagat ccactttgag ggatcaggag cccaggttgt
     2581 gggaccaaaa ggacagcctc tacaggtgtt gaccctaaac ctagaagatg agtatcggct
     2641 ttatgagacc tcagcagagc cagaagcttc tcctgggtcc acctggctct ccgactttcc
     2701 ccaggcctgg gcagaaaccg ggggcatggg actggcagtt cgccaggcgc ctctaatcat
     2761 acctctgaag gcaacctcca cccctgtgtc cataaaacaa taccccatgt cacaggaagc
     2821 caaactaggg atcaagcccc acatacagag gctgttggac cagggaatac tggtaccctg
     2881 ccagtccccc tggaatacac ccctgctacc cgttaagaaa ccaggaacta acgattatag
     2941 gcctgtccag gatctgagag aagtcaacaa gcgggtagaa gacatccacc ccaccgtgcc
     3001 caatccttat aacctcctaa gtgggctccc accgtcccac cggtggtata ctgtgcttga
     3061 tttaaaggat gcctttttct gcctgagact ccaccccacc agtcagcctc tcttcgcctt
     3121 cgagtggaga gatccaggga tgggaatctc aggacaatta acctggacca gactcccaca
     3181 gggtttcaaa aacagtccca ccctgtttga tgaggcacta cacagagacc tagcagactt
     3241 ccggatccag cacccagact tgatcctgct acagtacgtg gatgacatac tactggccgc
     3301 cacttctgag ctcgactgcc aacaaggtac tcgggccctg ttactaaccc taggaaacct
     3361 cgggtatcgg gcctcggcca agaaagccca actttgccag aaacaggtca agtatctggg
     3421 gtatctccta aaagagggtc agagatggct gactgaggcc agaaaagaga ctgtgatggg
     3481 gcagcctact ccgaagaccc ctcgacaact aagggagttc ctagggacgg caggcttctg
     3541 tcgcctctgg atccctgggt ttgcggaaat ggcagccccc ttgtatcctc ttaccaaaac
     3601 ggggactctg ttcaattggg gcccagacca gcaaaaggcc tatcaagaaa tcaaacaggc
     3661 cctcctaact gcccccgccc tgggattgcc agatttgact aagccctttg aactctttgt
     3721 cgacgagaag cagggctacg ccaaaggcgt cctaacgcaa aaactgggac cttggcgtcg
     3781 gcccgtggcc tacctgtcca aaaagctaga tccagtggca gctgggtggc ccccttgtct
     3841 acggatggta gcagccattg ccgttctgac aaaagatgca ggcaagctaa ctatgggaca
     3901 gccgctagtc atcctggccc cccatgcagt agaggcactg gtcaagcaac cccctgaccg
     3961 ctggctatcc aacgcccgca tgacccacta ccaggcaatg ctcctagaca ctgaccgagt
     4021 tcagttcgga ccagtggtgg ccctcaatcc tgccacctta ctccctctcc cggaagaagg
     4081 agccccccat gattgcctcg agatcttggc tgaaacgcat ggaaccagac cggatctcac
     4141 cgaccagccc atcccagacg ccgaccacac ctggtatacc gatgggagca gctttttgca
     4201 agaaggacag cgaaaggctg gggcagcggt gaccactgag accgaggtaa tctgggcaag
     4261 ggcactgccg gctggaacat ctgcccaacg ggccgaactg atagcactca ctcaagcctt
     4321 aaagatggca gaaggtaaga ggctaaacgt ttacactgac agccgatatg ctttcgccac
     4381 ggcccatatc catggagaga tctataggag gcgagggttg ctaacctcag agggtagaga
     4441 aatcaaaaac aagagcgaga tcctggcttt actgaaagct ctttttctgc caaagagact
     4501 cagtataatc cactgcctgg ggcatcaaaa aggagatagt gccgaggcta ggggcaaccg
     4561 cctagcagac caagcggccc gggaggcagc cataaagacg cctccagata catccactct
     4621 ccttatagag gattcaaccc catatacgcc tgcctatttc cattatactg aaacagatct
     4681 aaagaaactc agagagcttg gggccaccta taaccagagc aaaggatact gggtcttcca
     4741 aggcaagccg gtgatgcccg accaatttgt atttgaactg ttagactcac tccaccggct
     4801 cacccacctc ggctaccaga aaatgaaagt actccttgac agaggagaaa gcccctacta
     4861 catgctaaac cgggacaaaa ccctccaata tgtggcagat tcctgcacgg tctgtgccca
     4921 agtaaatgcc agcaaagcta aaatcggggc aggagtgaga gtacgaggac atcggccagg
     4981 ctcccattgg gagatcgatt ttacagaagt caagccaggg ctgtatgggt acaagtacct
     5041 cctggtattc gtggacacct tctctggttg ggtggaagcc tttccaacca agagagaaac
     5101 agcaagagtc gtgtccaaga aattgctgga agaaatattc ccgagattcg gaatgccaca
     5161 ggtattggga tctgataacg ggcctgcctt cacctcccag gtaagtcagt cggtggccga
     5221 tttactgggg atcgattgga aattacattg tgcttataga ccccagagtt caggtcaggt
     5281 agaaagaatg aatagaacca tcaaggagac tctaactaaa ttaacgcttg cagctggcac
     5341 tagagactgg gtactcctac tccccttagc tctttaccga gcccggaaca ctccgggccc
     5401 ccatggactg actccgtatg aaatcttgta cggggcgccc ccgccccttg ttaacttcca
     5461 tgaccccgac atgtcagaat taactaatag cccatctctc caagctcact tacaggccct
     5521 ccaaacggtg cagcgagaaa tttggaaacc actggccgag gcctaccggg accaactaga
     5581 ccaaccagtg ataccacacc ccttccagat tggagactcc gtgtgggtgc gccggcacca
     5641 gaccaaaaac ttagaacctc gctggaaggg accctacacc gtcctactga ccacccccac
     5701 cgctctcaag gtagacggca tctctgcatg gatacacggc gcccacgtca aggcagcgac
     5761 cacgccccca ataaaaccat catggagagt acaacgctct caaaaccctt taaaaatcag
     5821 gttaacccgt ggggccccct aattgtcctt ctgattctcg gaggggtcaa ccccgttacg
     5881 ttgggaaaca gcccccacca ggtttttaac ctcacctggg aagtgactaa tggagaccga
     5941 gaaacggtgt gggcaataac cggcaatcac cctctgtgga cttggtggcc tgacctcaca
     6001 ccagatctct gtatgttggc cctccacggg ccgtcctatt ggggcctaga atatcgggct
     6061 cctttttctc ctcccccggg gcccccctgc tgttcaggaa gcagcgactc cacgccaggc
     6121 tgttccagag attgtgagga gcccctgact tcatatactc cccggtgcaa tacggcctgg
     6181 aacagactta agttatctaa agtgacacat gcacacaatg gaggattcta tgtctgcccc
     6241 gggccacatc gcccccggtg ggcccggtca tgtggtggtc cagaatcctt ctattgtgcc
     6301 tcttggggct gcgaaaccac aggccgagca tcctggaaac catcctcgtc ctgggactac
     6361 atcacagtaa gcaacaatct aacctcagac caggcaaccc cagtatgcaa aggtaatgag
     6421 tggtgcaact ccttaactat ccggttcacg agctttggaa aacaggccac ctcctgggtc
     6481 acaggccatt ggtggggatt gcgcctatac gtctctggac atgacccagg gctcatcttt
     6541 gggatccgac ttaaaattac agactcgggg ccccgggtcc caatagggcc aaaccccgtc
     6601 ttgtcagacc aacgaccacc ttcccggcct agacccacca gatctccccc gccttcaaac
     6661 tccaccccaa ccgagacacc cctcaccctc cccgaacccc cgccagcggg agtcgaaagc
     6721 cgattgttaa atctagtaaa aggagcctac caagccctca acctcaccag tcctgataaa
     6781 acccaagagt gctggttatg cctagtatcg ggacccccat actacgaggg ggttgccgtc
     6841 ctaggtacct actccaacca tacttctgcc ccagctaact gctctgtggc ctctcaacac
     6901 aaattgacct tgtccgaagt gaccggacag ggactctgca taggagcggt ccctaaaacc
     6961 catcaagtct tgtgtaatac cacccaaaag acaagcgatg ggtcctacta tttggccgct
     7021 cccacaggaa ctacctgggc ttgtagtact ggacttactc cctgtatctc aaccaccata
     7081 cttgacctca ccaccgatta ctgtgtcctg gtcgagcttt ggccaagggt gacctaccat
     7141 tcccctagtt atgtttacca ccaatttgaa agacgagcca aatataaaag agaacccgtc
     7201 tcactaactc tggccctact attaggagga ctcactatgg gcggaattgc cgctggagtg
     7261 ggaacaggga ctaccgccct agtggccact cagcagttcc aacaactcca ggctgccatg
     7321 cacgatgacc ttaaagaagt tgaaaagtcc atcactaatc tagaaaaatc tttgacctcc
     7381 ttgtccgaag tagtgttaca gaatcgtaga ggcctagatc tactatttct aaaagaggga
     7441 ggtttgtgtg ctgccttaaa agaagaatgc tgtttctatg ccgaccacac aggattggta
     7501 cgggatagca tggccaaact tagagaaaga ttgagtcaga gacaaaagct ctttgaatcc
     7561 caacaagggt ggtttgaagg gctgtttaat aagtcccctt ggttcaccac cctgatatcc
     7621 accatcatgg gtcccctgat aatcctcttg ttaattttac tctttgggcc ttgtattctc
     7681 aatcgcctgg tccagtttat caaagacagg atttcggtag tgcaggccct ggttctgact
     7741 caacaatatc atcaacttaa gacaatagat gaataaaaga ttttattcag tttacagaaa
     7801 gaggggggaa tgaaagaccc cttcataagg cttagccagc taactgcagt aacgccattt
     7861 tgcaaggcat ggaaaaatac cagagctgat gttctcagaa aaacaagaac aaggaagtac
     7921 agagaggctg gaaagtaccg ggactagggc caaacaggat atctgtggtc aagcactagg
     7981 gccccggccc agggccaaga acagatggtc cccagaaata gctaaaacca caacagtttc
     8041 aagagaccca gaaactgtct caaggttccc cagatgaccg gggatcaacc ccaagcctca
     8101 tttaaactaa ccaatcagct cgcttctcgc ttctgtaccc gcgcttattg ctgcccagct
     8161 ctataaaaag ggtaagaacc ccacactcgg cgcgccagtc ctccgataga ctgagtcgcc
     8221 cgggtacccg tgtatccaat aaagcctttt gctgttgca
//