From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Eubacterium sp. (clone OSVL-13) 16S ribosomal RNA, partial
Date: 6 Nov 92 18:28:09 GMT
Distribution: bionet
Checksum: 24140 4

LOCUS       EUBRRDH      1109 bp ss-rRNA            RNA       02-NOV-1992
DEFINITION  Eubacterium sp. (clone OSVL-13) 16S ribosomal RNA, partial
            sequence.
ACCESSION   L04710
KEYWORDS    16S ribosomal RNA.
SOURCE      Eubacterium sp. (strain Octopus Spring:OS Type J) (library: Octopus
            Spring V-Long) cDNA to rRNA.
  ORGANISM  Eubacterium sp.
            Prokaryotae; Eubacteria.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ward,D.M., Bateson,M.M., Weller,R. and Ruff-Roberts,A.L.
  TITLE     Ribosomal RNA analysis of microorganisms as they occur in nature
  JOURNAL   Adv. Microb. Ecol. 12, 219-286 (1992)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Ward,D.M., Kopczynski,E.D., Heimbuch,B.K., Bateson,M.M. and
            Weller,R.
  TITLE     Uncultivated cyanobacteria, Chloroflexus-like and Spirochete-like
            inhabitants of a hot spring microbial mat
  JOURNAL   Appl. Environ. Microbiol. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            <1..>1109
                     /note="aligns with Escherichia coli 16S rRNA from base
                     pair 232 to 1267"
                     /note="putative"
                     /citation=[2]
                     /citation=[1]
     misc_feature    1..1109
                     /phenotype="Cyanobacteria"
                     /note="putative"
                     /citation=[2]
                     /citation=[1]
     unsure          replace(662..680,"")
                     /note="unsequenced region; n and s base pairs added to
                     maintain allignment with known 16S rRNA sequences"
                     /citation=[2]
                     /citation=[1]
BASE COUNT      265 a    248 c    341 g    227 t     28 others
ORIGIN      
        1 gtctgattag ctagttggtg gggtaatggc ctaycaaggc nacgatcagt agctggtctg
       61 agaggacgat cagccacact gggactgaga cacggcccag actcctacgg gaggcagcag
      121 tggggaattt tccgcaatgg gcgaaagcct gacggagcaa cgccgcgtga gggaggaagg
      181 cccttgggtt gtaaacctct tttctcaggg aagaattttg acggtacctg aggaataagc
      241 atcggctaac ttcgtgccag cagccgcggt ccgacgaagg atgcaagcgt tatccggaat
      301 tattgggcgt aaagagtacg taggcggctt gtcaagtccc gggttaaatc ccgcagctta
      361 actgcggatc ggccttggaa actggcttgc tggagtgtgg taggggtagc gggaattcct
      421 ggtgtagcgg tgaaatgcgt agagatcagg aagaacacct gtggcgaaag cgcgctactg
      481 gaccatgact gacgctgagg tacgaaagct aggggagcaa aagggattag atacccctgt
      541 agtcctagcc gtaaacgatg gacactagat gttgcccgta tagacccggg cagtgtcgta
      601 cgtaacgcgt taagtgtccc gcctggggag tatgcacgca agtgtgaaac tcaaaggaat
      661 tnnnnnnnnn nnnnnnnnnn gntggagtat gtggtttaat tcgatgcaac gcgaagaacc
      721 ttaccagggc ttgacatgtc gcgaatcctg gggaaacctg ggagtgccgc aaggagcgcg
      781 aacacaggtg gtgcatggct gtcgtcagct cgtgtcgtga gatgttgggt taagtcccgc
      841 aacgagcgca accctcgtcc ttagttgcca tcattcagtt gggcactcta gggagactgc
      901 cggtgacaaa ccgtgagaan gtgaggatga cgtcaagtca gcatgcccct tacgtcctgg
      961 gctacacacg tactacaatg gcgtggacag agggataatn cctaaactac gtctcagttc
     1021 agatcgtagg ctgcaactcg cctacgtgaa ggcggaatcc gtagtaatcg caggtcagca
     1081 tactgcggtg aatacgttcc cnnnncttg
//