From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (HIVUG06) gp120 (env) RNA.
Date: 13 Aug 92 10:00:30 GMT
Distribution: bionet
Checksum: 09281     4

LOCUS       HIV1UG06      801 bp ss-RNA             VRL       13-AUG-1992
DEFINITION  Human immunodeficiency virus type 1 (HIVUG06) gp120 (env) RNA.
ACCESSION   M98503
KEYWORDS    envelope protein; glycoprotein 120.
SOURCE      Human immunodeficiency virus type 1 (individual_isolate UG06) RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Atkin,A., Pestano,G., Serwadda,D., Prince,A.M., Pascual,D.,
            Sewankambo,N. and Boto,W.M.
  TITLE     Phylogenetic and serological characterization of two Ugandan HIV-I
            isolates
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Pestano,G., Atkin,A., Sewankambo,N., Prince,A.M., Ntambi,J.M.,
            Serwadda,D. and Boto,W.M.
  TITLE     Molecular cloning and analysis of cDNA encoding the V3 loops in two
            seroprevalent Ugandan HIV-1 isolates
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     virion          1..801
                     /organism="HIV-I"
                     /citation=[1]
                     /citation=[2]
                     /partial
     variation       replace(177,"a")
                     /frequency=0.07
                     /citation=[1][2]
                     /gene="env"
                     /citation=[1]
                     /citation=[2]
     variation       replace(215,"a")
                     /frequency=0.93
                     /citation=[1][2]
                     /gene="env"
                     /citation=[1]
                     /citation=[2]
     variation       replace(327,"c")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(378,"g")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(457,"a")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(508,"g")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(564,"g")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(588,"a")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(608,"g")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
     variation       replace(771,"g")
                     /citation=[1]
                     /gene="env"
                     /citation=[1]
BASE COUNT      313 a    127 c    176 g    185 t
ORIGIN
        1 acatggaatc aagccagtag tatcaactca actactgttg aatggcagcc tagcagaaaa
       61 agaggtaaaa attagatctg aaaatatctc agacaatgct aaaaccataa tagtacaact
      121 taccaagcct gtaacaatta attgtaccag accttacaaa aaggtaagaa gacgtataca
      181 tataggacca ggacgatcat tctatacaag taacttaggg gatataagac aggcatattg
      241 taatgtcagt ggatcacagt ggaataaaac tttacaacag gtagttacaa aattaagaga
      301 atactggaac acaacaataa actttagtaa accctcagga ggggatttag aaattacaac
      361 acatagtttt aattgtgtag gagaattttt ctattgtaat acatcaggcc tgtttaatag
      421 ctcatggaag ataggcagtc agccaaatag caaggagtca aatggcaata taactctccc
      481 atgcagaata aggcaaatta taagaatatg gcagagaaca ggacaagcaa catatgcccc
      541 tcccatccaa ggagtaataa ggtttgaatc aaacattaca ggactactat taacaagaga
      601 tggtggagtt aacagtacag aggaaacctt cagacctgga ggaggagata tgagggacaa
      661 ttggagaagt gaattatata agtataaagt agtgaaaatt gaaccactag gagtagcacc
      721 ctccagggca aagagaagag tggtgtggag agaaaaaaga gcagttgttg aaataggagc
      781 tgtcttcctt gggttcttgg g
//