HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human T-cell lymphotropic virus type I pol gene sequence.
Date: 7 Apr 92 10:05:25 GMT
Distribution: bionet
Checksum: 11813     2

LOCUS       HL1POLA       140 bp ds-DNA             VRL       07-APR-1992
DEFINITION  Human T-cell lymphotropic virus type I pol gene sequence.
ACCESSION   M76751
KEYWORDS    pol gene.
SOURCE      Human T-cell lymphotropic virus type I DNA.
  ORGANISM  Human T-cell lymphotropic virus type I
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Oncovirinae; Type C oncovirus group;
            Mammalian type C oncoviruses.
REFERENCE   1  (bases 1 to 140)
  AUTHORS   Sherman,M.P., Saksena,N.K., Dube,D.K., Yanagihara,R. and
            Poiesz,B.J.
  TITLE     Evolutionary insights on the origin of human T-cell
            lymphoma/leukemia virus type I (HTLV-I) derived from sequence
            analysis of a new HTLV-I variant from papua new guinea
  JOURNAL   J. Virol. 66, 2556-2563 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     misc_feature    1..140
                     /note="the sequence was derived from PCR amplified DNA
                     after cloning into the M13 vector and corresponds to the
                     region designated above in the prototype ATK isolate
                     numbered according to the EMBL system"
                     /note="pol gene from base 4779-4918"
                     /citation=[1]
BASE COUNT       45 a     39 c     20 g     36 t
ORIGIN
        1 gactggtaga acgctctaat ggcattctta aaaccctatt atataagtac tttactgaca
       61 aacccgacct acccatggat aatgctctat ccatagccct atggacaatc aaccacctga
      121 atgtgttaac caactgccac
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC02.DA19, V3
Date: 7 Apr 92 10:04:59 GMT
Distribution: bionet
Checksum: 37891     3

LOCUS       HIVFLQ619     317 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC02.DA19, V3
            region.
ACCESSION   M90922
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone DA19 of DNA
            ID 5242.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from this Florida control sample.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>317
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEIVIRSANFTDNTKIIIVQLNESVEINCTRPSNNTRKSIP
                     IGPGRAFYATGDVIGDIRQAHCNISGAKWNNTLKRVVIKLREQFGNKTIVFDQPSGGD
                     PEIA"
BASE COUNT      138 a     48 c     61 g     70 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaaatagt aattagatct gccaatttca cagacaatac taaaatcata
       61 atagtacagc tgaatgaatc tgtagaaatt aattgtacaa gacccagcaa caatacaaga
      121 aaaagtatac ctataggacc aggcagagca ttttatgcaa caggagatgt aataggagat
      181 ataagacaag cacattgtaa cattagtgga gcaaaatgga ataacacttt aaaacgggta
      241 gtaataaaat taagagaaca atttgggaat aaaacaatag tctttgatca accctcagga
      301 ggggacccag aaattgc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: X.laevis Xlim-2A mRNA for homeobox containing protein (partial)
Date: 10 Apr 92 10:14:32 GMT
Distribution: bionet
Checksum: 27536     2

LOCUS       XELIM2A       118 bp ss-mRNA            VRT       10-APR-1992
DEFINITION  X.laevis Xlim-2A mRNA for homeobox containing protein (partial)
ACCESSION   Z11587
KEYWORDS    homeobox protein.
SOURCE      Xenopus laevis RNA.
  ORGANISM  Xenopus laevis
            Eukaryota; Animalia; Chordata; Vertebrata; Amphibia; Lissamphibia;
            Anura; Archeobatrachia; Pipoidea; Pipidae; Xenopodinae.
REFERENCE   1  (bases 1 to 118)
  AUTHORS   Taira,M.
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 118)
  AUTHORS   Taira,M., Jamrich,M., Good,P.J. and Dawid,I.B.
  TITLE     The LIM Domain-containing Homeobox Gene Xlim-1 is Expressed
            Specifically in the Organizer Region of Xenopus Gastrula Embryos.
  JOURNAL   Genes Dev. (1992) In press
  STANDARD  full automatic
REFERENCE   3  (bases 1 to 118)
  AUTHORS   Taira,M., Jamrich,M., Good,P.J. and Dawid,I.B.
  TITLE     The LIM domain-containing homeobox gene Xlim-1 is expressed
            specifically in the organizer region of Xenopus gastrula embryos.
  JOURNAL   Genes Dev. 6, 356-366 (1992)
  STANDARD  full automatic
COMMENT
            From EMBL    entry XLIM2A;  dated 19-MAR-1992.
FEATURES             Location/Qualifiers
     CDS             <1..>118
                     /note="PCR fragment ofhomeobox from Xlim-2A gene; partial
                     cDNA sequence"
                     /product="homeobox-containingprotein"
                     /gene="Xlim-2A"
                     /codon_start=2
                     /translation="KAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQV"
BASE COUNT       33 a     31 c     29 g     25 t
ORIGIN
        1 taaggccaag caactggaga cccttaaggc tgcttttatt gccaccccta agcccaccag
       61 acatattcgg gaacagctag ctcaggaaac agggcttaac atgcgggtga ttcaggtt
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: G.max mRNA for nodulin 24
Date: 10 Apr 92 10:12:56 GMT
Distribution: bionet
Checksum: 13149     2

LOCUS       SOYNOD24      382 bp ss-mRNA            PLN       10-APR-1992
DEFINITION  G.max mRNA for nodulin 24
ACCESSION   X59903
KEYWORDS    nodulin-24.
SOURCE      Glycine max RNA.
  ORGANISM  Glycine max
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
            Rosidae; Rosales; Fabaceaea.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Sandal,N.N., Bojsen,K., Richter,H., Sengupta-Gopalan,C. and
            Marcker,K.A.
  TITLE     The nodulin 24 protein family shwos similarity to a family of
            glycine-rich plant proteins
  JOURNAL   Plant Mol. Biol. 18, 607-610 (1992)
  STANDARD  full automatic
COMMENT     *source: sub_strain=Prize;
            From EMBL    entry GMNOD24;  dated 19-MAR-1992.
FEATURES             Location/Qualifiers
     CDS             <1..281
                     /product="nodulin 24"
                     /codon_start=3
                     /translation="IARVILGMLAVILLISSEVAARDLKEGEVVKETNEENDAKLVGG
                     GDDIYENINCERYKFVDLNPTIGCPCGCCKLYIVLQLVCVHCCPKTRN"
     polyA_signal    281..303
BASE COUNT      111 a     63 c     96 g    112 t
ORIGIN
        1 agatagcaag ggttatccta ggaatgttgg ccgtgatcct tcttatctcc tcagaggtgg
       61 cagccaggga tttaaaagag ggtgaggttg tcaaagagac taatgaagag aatgatgcca
      121 aattagttgg tggtggggat gacatctatg aaaatatcaa ttgtgagcgt tacaaatttg
      181 tggatttaaa cccgaccatt ggttgcccct gtggctgttg taagttgtat atagtactgc
      241 agttagtttg cgtacattgc tgcccaaaaa ctcggaattg agacggtgta gtccatcaat
      301 aaaactaatc tcatgttgta cgtgagatgc atgcatgata gacaacaatg acggtgtctt
      361 tcttaccact agagatattt ca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPB29, V3
Date: 7 Apr 92 10:02:19 GMT
Distribution: bionet
Checksum: 61866     3

LOCUS       HIVFLPB209    342 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPB29, V3
            region.
ACCESSION   M90871
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone A29 of DNA
            ID 5592.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 13 clone sequences over the V3
            region obtained by the CDC from patient "B" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>342
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEVVIRSANFTDNAKIIIVQLNASVEINCTRPNNNTRKGIH
                     IGPGRAFYATGEIIGDIRQAHCNISRVKWNNTLEQVKTKLKEQFGNKTIIFNHSSGGD
                     PEIVMHSFNCGG"
BASE COUNT      148 a     48 c     68 g     78 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaagtagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacagc tgaatgcatc tgtagaaatt aattgtacaa gacccaacaa caatacaaga
      121 aaaggtatac atataggacc agggagggca ttttatgcaa caggagaaat aataggagat
      181 ataagacaag cacattgtaa cattagtaga gtaaaatgga ataatacctt agaacaggta
      241 aagacaaaat taaaagaaca atttgggaat aaaacaataa tctttaatca ctcctcagga
      301 ggggacccag aaattgtaat gcacagtttt aattgtggag gg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human T-cell lymphotropic virus type I glycoprotein 21 (GP21) gene
Date: 7 Apr 92 10:05:20 GMT
Distribution: bionet
Checksum: 34164     2

LOCUS       HL1GP21A      173 bp ds-DNA             VRL       07-APR-1992
DEFINITION  Human T-cell lymphotropic virus type I glycoprotein 21 (GP21) gene
            sequence.
ACCESSION   M76748
KEYWORDS    glycoprotein 21; transmembrane glycoprotein.
SOURCE      Human T-cell lymphotropic virus type I DNA.
  ORGANISM  Human T-cell lymphotropic virus type I
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Oncovirinae; Type C oncovirus group;
            Mammalian type C oncoviruses.
REFERENCE   1  (bases 1 to 173)
  AUTHORS   Sherman,M.P., Saksena,N.K., Dube,D.K., Yanagihara,R. and
            Poiesz,B.J.
  TITLE     Evolutionary insights on the origin of human T-cell
            lymphoma/leukemia virus type I (HTLV-I) derived from sequence
            analysis of a new HTLV-I variant from papua new guinea
  JOURNAL   J. Virol. 66, 2556-2563 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     misc_feature    1..173
                     /function="transmembrane glycoprotein"
                     /note="the sequence was derived from PCR amplified DNA
                     after cloning into the M13 vector and corresponds to the
                     region designated above in the prototype ATK isolate
                     numbered according to the EMBL syste"
                     /note="the product is glycoprotein 21 from base 6325-6497"
                     /citation=[1]
BASE COUNT       49 a     43 c     39 g     42 t
ORIGIN
        1 ctgcccagaa cagacgaggc cttgatctcc tgttctggga gcaaggagga ttatgcaaag
       61 cattacaaga acagtgctgt tttctaaata ttactaattc ccatgtctca atactacaag
      121 aaagaccccc ccttgagaat cgagtcctga ctggctgggg ccttaactgg gac
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Triakis scylla MHC class I a3 domain-like gene sequence, exon.
Date: 10 Apr 92 10:14:11 GMT
Distribution: bionet
Checksum: 34887     2

LOCUS       TRKAMHC3A     400 bp ds-DNA             VRT       10-APR-1992
DEFINITION  Triakis scylla MHC class I a3 domain-like gene sequence, exon.
ACCESSION   M85291
KEYWORDS    MHC class I a3 domain-like protein.
SOURCE      Triakis scylla blood DNA.
  ORGANISM  Triakis scylla
            Eukaryota; Animalia; Chordata; Vertebrata; Chondrichthyes;
            Elasmobranchii; Euselachii; Neoselachii; Galeomorphii;
            Carcharhiniformes; Triakidae.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Hashimoto,K., Nakanishi,T. and Kurosawa,Y.
  TITLE     Identification of a shark sequence resembling the major
            histocompatibility complex class I alpha-3 domain
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 2209-2212 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     intron          1..60
                     /partial
     exon            61..342
     mRNA            61..342
                     /partial
     intron          343..400
                     /partial
BASE COUNT      108 a    122 c     86 g     84 t
ORIGIN
        1 aggatattgt gtgtacttta cctggcgatg gttaaactgt ctgtccttcc ctctctgcag
       61 ccaagccctc cgtcaacata accacacatc gcctgcacag agggaaagac cccttacttc
      121 tcatctgtca tgtgaatgga ttctatccaa gtggcatcaa cgcaacctgg ctgcacaacg
      181 gtggcaccat ccagcaggag gtgttgagta gcaggatttt accaaacaca gacgggactt
      241 tccagaccac cctgcagatc agcgtcactc cccagagcag agacacctac acctgccaag
      301 tggagcacag cagtagcact gacaaactaa cagcgacttg gggtaagccc tctcccacaa
      361 tcattcgagg cacaaagaaa cattgcctgc tcccttactg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: H.sapiens rearranged mRNA for fetal IG heavy chain Vh3, DN4 and Jh4
Date: 10 Apr 92 10:07:11 GMT
Distribution: bionet
Checksum: 50865     3

LOCUS       HUMVH31321    362 bp ss-mRNA            PRI       10-APR-1992
DEFINITION  H.sapiens rearranged mRNA for fetal IG heavy chain Vh3, DN4 and Jh4
            (clone FL13-21)
ACCESSION   X62964
KEYWORDS    CDR3 region; Jh element; Vh element; immunoglobulin heavy chain;
            rearranged gene.
SOURCE      Homo sapiens RNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Raaphorst,F.M.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Raaphorst,F.M., Timmers,E., Kenter,M., Van Tol,M.J., Vossen,J. and
            Schuurman,R.K.
  TITLE     Restricted utilization of germ-line Vh3 elements and short diverse
            third complementarity-determining regions (CDR3) in human fetal
            Immunoglobulin heavy chain rearrangements
  JOURNAL   Eur. J. Immunol. 22, 247-251 (1992)
  STANDARD  full staff_review
COMMENT     *source: stage=13 week old foetus; *source: tissue=liver; *source:
            cell_type=B lymphocyte; *source: isolate=Clone FL13-26; *source:
            chromosome=14; *source: is_germline=N;
            For related sequences see X62954-X62972, X53612-3, M37277,
            Schroeder H.W. Jr. et al, Proc.Natl.Acad.Sci.USA, 87:6149(1990) &
            Ichihara y. et al, Eur. J. Immunol. 18:649(1988)
            From EMBL    entry HSVH31321;  dated 23-MAR-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..296
                     /note="Vh element"
     misc_feature    297..315
                     /note="CDR3"
     misc_feature    316..362
                     /note="Jh element"
BASE COUNT       77 a     96 c    112 g     77 t
ORIGIN
        1 gaggtgcagc tggtggagtc tgggggaggc ttggtacagc ctggggggtc cctgagactc
       61 tcctgtgcag cctctggatt cacctttagc agctatgcca tgagctgggt ccgccaggct
      121 ccagggaagg ggctggagtg ggtctcagct attagtggta gtggtggtag cacatactac
      181 gcagactccg tgaagggccg gttcaccatc tccagagaca attccaagaa cacgctgtat
      241 ctgcaaatga acagcctgag agccgaggac acggccgtat attactgtgc gaaagatcct
      301 gtatagcagc tcgtcaatac ttccagcact ggggccaggg caccctggtc accgtctcct
      361 ca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C.caldarium gene for rRNA
Date: 10 Apr 92 10:04:31 GMT
Distribution: bionet
Checksum: 44664     3

LOCUS       CYNRRNA      1224 bp ds-DNA             PLN       10-APR-1992
DEFINITION  C.caldarium gene for rRNA
ACCESSION   X65077
KEYWORDS    18S ribosomal RNA; 25S ribosomal RNA; 5.8s ribosomal rna.
SOURCE      Cyanidium caldarium DNA.
  ORGANISM  Cyanidium caldarium
            Eukaryota; Rhodophycota; Rhodophyceae.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Elela,S.A. and Nazar,R.N.
  TITLE     Extended secondary structure as a basis of increased RNA stability
            in a Thermophilic Alga Cyanidium Caldarium
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=14-1-1;
            From EMBL    entry CCRRNA;  dated 31-MAR-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..210
                     /product="18S rRNA"
     misc_feature    446..615
                     /product="5.8S rRNA"
     misc_feature    1151..1224
                     /product="25S rRNA"
BASE COUNT      346 a    212 c    275 g    391 t
ORIGIN
        1 ttgtaaacgc gagtcatcaa cttgcgttga atacgtccct gccctttgta cacacgcccg
       61 tcgctcctac cgattgaacg atccggtgaa gcgtacggat tgcaaggcca gtcaatatga
      121 tttgctttgc gagaagtacg ttgaacctta ttgtttagag gaaggagaag tcgtaacaag
      181 gtttccgtag tgaacctgcg gaaggatcat tcacagtgac aagtataaaa aagaagtgga
      241 gagagaatgt gaaaatttgg ctggaaagag gagttgaatt tttcattttc tcttttgctt
      301 ttttttatat tattttcacc tgtgcatgtt ggaaaggggt atgctgattg acttgaatac
      361 agtgaccttt agaaattgtc attatatttt tcttccattt aagtaccaaa ccaataaaca
      421 ttcaactttg tgttgtaatc attgacgaaa gaagctctca acggtggata tctcggctct
      481 cttgacgatg aagaacgcac aaaaagcgaa atgtagtgtg aactgcaagt tttcgtgaat
      541 cattgaatct ttgaacgcaa gttgcgcttt caggagaatt ttattttcct ggagcacgtc
      601 tgttggagtg tctctttgac atggtatctt gtactgcatg catatgcaag gatggaaact
      661 tttcgatgtc aatagagaca tggaaatttt cgacaagaga tttagaaaga gtagaatgga
      721 tgtctatgag atgtccaata gagaatgtgg agaggagtgt gttgtgtcgt tggtatttcg
      781 attggacatg gcgtgattat gtgtgtgtat cttgtagatg tgtctgttag acaagtatgc
      841 aagatgacat gtgtttatgt gaagtcttgt agaccagtct atgtgacaat ctacaagaca
      901 aatgctatgt tatgcatgcc acgatgtcca atggaaatac caagcctcaa agatggaccg
      961 attatgttgt tcttgttgtg gtcattacac tattctgcaa gtgtaaatca ccattggaaa
     1021 gagaataggt atcgctttgg catgatgatc agtcttacta ctctactgct acatatcgcc
     1081 ttttctttcc tttcgacaca ttttttgcct catctttgta tcacatgctc atcatccact
     1141 tttttttaat gcctagactc aatcagacga ggatagccgc tgaacttaag tccatatcat
     1201 taagcggagg aaaagaaacc actg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Gymnodinium varians 18S ribosomal RNA
Date: 9 Apr 92 10:03:06 GMT
Distribution: bionet
Checksum: 01076     2

LOCUS       GYN18SRRNB    474 bp ss-rRNA            RNA       09-APR-1992
DEFINITION  Gymnodinium varians 18S ribosomal RNA
ACCESSION   M88513
KEYWORDS    18S ribosomal RNA.
SOURCE      Gymnodinium varians rRNA.
  ORGANISM  Gymnodinium varians
            Eukaryota; Chromophycota; Dinophyceae; Dinophycidae; Gymnodiniales;
            Gymnodiniaceae.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Rowan,R. and Powers,D.A.
  TITLE     Ribosomal RNA sequences and the diversity of symbiotic
            dinoflagelaates (zooxanthellae)
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 3639-3643 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     rRNA            1..474
                     /product="18S ribosomal RNA"
                     /gene="18S rRNA"
                     /citation=[1]
                     /partial
BASE COUNT      111 a    102 c    122 g    139 t
ORIGIN
        1 tctagagcta atacatgcgc aaaaacccga ctttgcagga gggttgtgtt tattagatac
       61 agaaccaacc caggctctgc ctggacatgt ggtgattcat gataacttga tgaatcgtgt
      121 ggctccgccg acgatgcatc attcaagttt ctgacctatc agcttccgac ggtagggtat
      181 tggcctaccg tggcaatgac gggtaattcc agctccaata gcgtatatta aagttgttgc
      241 ggttaaaaag ctcgtagttg gatttctgtt gggggtgacc ggtccgcctt ctgggtgtgc
      301 atctggctca gccttgacat cttcctgaag aacgtgtctg cacttcgctg tgtggcgcgg
      361 catttaggac ttttaccttg aggaaattag agtgtttcaa gcacgcgcac gccttgaata
      421 cattagcatg gaataataag ataggacccc agttctattt tgttggtttc taga
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC09, V3 region.
Date: 7 Apr 92 10:04:06 GMT
Distribution: bionet
Checksum: 19228     2

LOCUS       HIVFLQ18      312 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC09, V3 region.
ACCESSION   M90939
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct PCR
            amplification product of Florida control sample C01 of DNA ID 5047.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
FEATURES             Location/Qualifiers
     CDS             <1..>312
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="EVVIRSENFTNNAKTIIVQLNVSVEINCTRPNNNTRKGIHIGPG
                     RAFYATGDIIGDIRQAYCNISRAKWNNTLKQVVTKLREQFGITTMVFYHSSGGDPPVV
                     ML"
BASE COUNT      125 a     50 c     62 g     75 t
ORIGIN      near the C2-V3 boundary
        1 gaggtagtaa ttagatctga aaatttcacg aacaatgcta aaaccataat agtacagctg
       61 aatgtatctg tagaaattaa ttgtacaaga cccaacaaca atacaagaaa agggatacat
      121 ataggaccag ggagagcatt ttatgcaaca ggagacataa taggagatat aagacaagca
      181 tattgtaaca ttagtagagc aaaatggaat aatactttaa aacaggtagt tacaaagtta
      241 agagaacaat ttgggattac aacaatggtc ttctatcact cctccggagg ggacccccca
      301 gttgttatgc tc
//