From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: NSs protein=non-structural protein, nucleocapsid [Impatiens
Date: 6 Jan 93 07:03:06 GMT
Distribution: bionet
Checksum: 45938 7

LOCUS       S108339      2992 bp    RNA             VRL       30-NOV-1992
DEFINITION  NSs protein=non-structural protein, nucleocapsid [Impatiens
            necrotic spot virus INSV, Genomic RNA, 2992 nt]
ACCESSION   S40057
KEYWORDS    .
SOURCE      Impatiens necrotic spot virus INSV
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   de Haan,P., de Avila,A.C., Kormelink,R., Westerbroek,A.,
            Gielen,J.J., Peters,D. and Goldbach,R.
  TITLE     The nucleotide sequence of the S RNA of Impatiens necrotic spot
            virus, a novel tospovirus.
  JOURNAL   FEBS Lett. 306, 27-32 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 108339] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 1.  Map location: S segment.  The
            authors begin their numbering at 4.
FEATURES             Location/Qualifiers
     CDS             63..1412
                     /note="non-structural protein;  For the protein sequence
                     (NCBI gibbsq 108340):  This sequence comes from Fig. 1."
                     /product="NSs protein"
                     /codon_start=1
                     /translation="MSSAMYETIIKSKSSIWGTTSSGKAVVDSYWIHDQSSGKKLVEA
                     QLYSDSRSKTSFCYTGKVGFLPTEEKEIIVRCFVPIFDDIDLNFSFSGNVVEILVRSN
                     TTNTNGVKHQGHLKVLSSQLLRMLEEQIAVPEITSRFGLKESDIFPPNNFIEAANKGS
                     LSCVKEVLFDVKYSNNQSMGKVSVLSPTRSVHEWLYTLKPVFNQSQTNNRTVNTLAVK
                     SLAMSATSDLMSDTHSFVRLNNNKPFKISLWMRIPKIMKSNTYSRFFTLSDESSPKEY
                     YISIQCLPNHNNVETVIEYNFDQSNLFLNQLLLAVIHKIEMNFSDLKEPYNVIHDMSY
                     PQRIVHSLLEIHTELAQTVCDSVQQDMIVFTINEPDLKPKKFELGKKTLNYSEDGYGR
                     KYFLSQTLKSLPRNSQTMSYLDSIQMPDWKFDYAAGEIKISPRSEDVLKAISKLDLN"
     CDS             complement(2055..2843)
                     /note="Description: nucleocapsid;  For the protein
                     sequence (NCBI gibbsq 108341):  This sequence comes from
                     Fig. 1."
                     /codon_start=1
                     /translation="MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREK
                     IQNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIKKTRNNSERVGVNDMTFRRLDAM
                     VRVHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLIASV
                     LNFEIAALVPAIYQDAKHVELGIDMSKFSTKEAVGKVCTVLKSKGYSMNSVEIGKAKQ
                     YADILKACSPKAKGLAAMDHYKEGLTSIYSMFNATIDFGKNDSI"
BASE COUNT      972 a    527 c    454 g   1039 t
ORIGIN      
        1 gaacaaccaa gctacaacaa atcttacaat attgtcaatt acattactac ttccatttta
       61 acatgtctag tgcaatgtat gaaacaatta tcaaatcgaa gtcctcaatc tggggaacaa
      121 catcttcggg taaagcagta gtagatagtt attggattca tgatcaatct tccggaaaga
      181 agttggtcga agctcaactc tattctgact ccaggagcaa gaccagtttc tgttacactg
      241 gtaaagttgg ctttctccca acagaagaaa aagaaattat agtgagatgt tttgtgccta
      301 tttttgatga cattgatctg aatttctcct tttcagggaa tgttgtcgaa attctggtca
      361 gatctaacac aacaaacaca aacggtgtta aacatcaagg tcatctcaaa gtgttatcct
      421 ctcagttgct cagaatgctt gaagagcaaa tagcagtgcc tgaaattact tcaagattcg
      481 gtctgaaaga atctgacatc ttccctccaa ataatttcat tgaagctgca aataaaggat
      541 cattgtcttg tgtcaaagaa gtcctttttg atgtcaagta ttcaaacaac caatccatgg
      601 gcaaagtcag tgttctttct cctaccagaa gtgttcatga atggctgtac acacttaagc
      661 ctgtttttaa ccaatcccag accaacaaca ggacagtaaa cactttggct gtaaaatcac
      721 tggcaatgtc tgcaacttct gatttaatgt cagatactca ttcgtttgtc aggctcaata
      781 ataacaagcc ttttaaaatc agcctttgga tgcgcatccc taaaataatg aaatcaaaca
      841 catacagccg gttcttcacc ctgtctgatg aatcttctcc taaagagtat tatataagca
      901 ttcaatgtct tccgaatcac aacaatgttg aaacagtcat tgaatataac tttgatcagt
      961 caaacctctt cttgaatcaa ctccttctag cagtgattca taaaattgag atgaattttt
     1021 ctgatctaaa agaaccttac aatgttatcc atgatatgtc gtatcctcaa agaattgttc
     1081 attcacttct tgaaatccac acagaacttg ctcaaactgt ctgtgacagt gttcagcaag
     1141 acatgattgt cttcactata aatgagccag atctaaagcc aaaaaagttt gagctaggga
     1201 aaaagacttt aaattattca gaagatggtt atgggagaaa atatttcctt tctcagacct
     1261 tgaaaagtct tccgagaaac tcacaaacaa tgtcttattt ggatagcatc cagatgcccg
     1321 attggaaatt tgactatgct gcaggtgaaa taaaaatttc tcctagatca gaggatgttt
     1381 tgaaagctat ttctaaatta gatttaaatt aaccttggtt aaacttgtcc ctaagtaaag
     1441 tttgtttaca tgcatttaga tcagattaaa caaatctaat aacagataaa ccaaaaacaa
     1501 tcatatgaaa taaataaata aacataaaat atataaaaaa tacaaaaaaa atcataaaat
     1561 aaataaaaac caaaaaagga tggccttcgg gcacaatttg gttgctttaa taatgcttta
     1621 aaagaatgta ttagtaaatt ataaacttta aatccaatct actcacaaat tggccaaaaa
     1681 tttgtatttg tttttgtttt tgttttttgt tttttgtttt tgttttgttt tatttgtttt
     1741 ttattttgtt ttttgttttt tgttttttat tttatttata tatatatata tatatatttt
     1801 gtagtggttt ttattgtttt tattattttt tgtagctttt ttacttgttt atttcacacg
     1861 caaacacact ttcaagttta tatattaaaa cacacattaa acttatttca aataatttat
     1921 aaaagcacac ttaatacact caaacaataa ttaattattt tattttttat tttatttttt
     1981 atttttatta tttttatttt tatttattta aatgcattta acacaacaca aagcaaacca
     2041 agctcaaatc tcttttaaat agaatcattt ttcccaaaat caatagtagc attaaacatg
     2101 ctgtaaatgg atgtaagccc ttctttgtag tggtccattg cagcaagtcc tttagctttc
     2161 ggactacaag cctttagtat atctgcatat tgtttagcct tgccaatttc aacagagttc
     2221 atgctatatc ctttgctttt tagaactgtg cacactttcc caactgcctc tttagtgcta
     2281 aacttagaca tgtcaattcc aagctcaaca tgtttagcat cttgataaat agccggaact
     2341 agtgcagcta tttcaaaatt cagtacagat gctatcagag gaagacttcc tcctaagaga
     2401 acacccaaga cacaggattt caaatctgtg gttgcaagac catatgaggc aatcagaggg
     2461 tgacttggaa ggctatttat agcttcagtc agagcagatc cattgtcctt tatcattcca
     2521 acaagatgaa ctctcaccat tgcatcaagt cttcggaaag tcatatcatt gaccccaact
     2581 ctttctgaat tgtttctagt tttcttaatt gtgactgatc caaaagtgaa gtcagcactc
     2641 ttaatgactc tcattataga ttgcctattc ttgaggaagg ataggcagga tgcagtagtc
     2701 atgttctgaa tcttttcacg gttgttggta aagaagtcag tgaaattgaa agacccttca
     2761 ttttgagttt cctcaaattc taaggaatca gattgagtca aaagcttgac tatgttctcc
     2821 ttggtaatct ttgctttgtt catcttgatc tgctgacttt actaacttta aagcttaaag
     2881 tgttcaaatt actaaatagt acttgcggtt aaagtagtat ttggtaaaat ttgtaatttt
     2941 tcagtttcta gctttggatt atatgatgtt atattcgtga cacaattgct ct
//