HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPA8, V3 region.
Date: 7 Apr 92 10:02:14 GMT
Distribution: bionet
Checksum: 47467     3

LOCUS       HIVFLPA8      351 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPA8, V3 region.
ACCESSION   M90860
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone A8 of DNA ID
            4428.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from patient "A" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>351
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEVVIRSANFTDNAKIIIVQLNASVEINCTRPNNNTRKGIQ
                     IGPGRAFYATGEIIGDIRQAHCNISREKWNNTLKQVVTKLREQFENKTIIFNHSSGGD
                     PEIVMHSFTCGGEFF"
BASE COUNT      149 a     49 c     69 g     84 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaggtagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacaac tgaatgcatc tgtagaaatt aattgtacaa gacccaacaa caatacaaga
      121 aaaggtatac agataggacc aggaagggca ttttatgcaa caggagaaat aataggagat
      181 ataagacaag cacattgtaa cattagtaga gaaaaatgga ataatacttt aaagcaggta
      241 gttacaaaat taagagaaca atttgagaat aaaacaataa tctttaatca ctcctcagga
      301 ggggacccag aaattgtaat gcacagtttt acttgtggag gggaattttt c
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC11, V3 region.
Date: 7 Apr 92 10:04:09 GMT
Distribution: bionet
Checksum: 06674     2

LOCUS       HIVFLQ20      245 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC11, V3 region.
ACCESSION   M90941
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct PCR
            amplification product of Florida control sample C01 of DNA ID 5051.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
FEATURES             Location/Qualifiers
     CDS             <1..>245
                     /note="env polyprotein (AA at 2)"
                     /codon_start=2
                     /translation="KTIIVQLKDPVEINCTRPNNNTRKSIHIAPGRAFYATGGIIGDI
                     RQAHCNISRAKWNNTLGQIVSKLREHFGNTTTVAFQS"
BASE COUNT      107 a     42 c     45 g     51 t
ORIGIN      near the C2-V3 boundary
        1 taaaaccata atagtacagc tgaaagaccc tgtagaaatt aattgtacaa gacccaacaa
       61 caatacaaga aaaagtatac atatagcacc agggagggca ttttatgcaa caggaggaat
      121 aataggagat ataagacaag cacattgtaa cattagtaga gcaaaatgga ataacacctt
      181 aggacagata gttagcaaat taagagaaca ctttgggaat acaacaacag tcgcctttca
      241 atcct
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Chroogomphus vinicolor 18S ribosomal RNA gene, partial.
Date: 10 Apr 92 10:04:20 GMT
Distribution: bionet
Checksum: 16656     2

LOCUS       CHG18SRRN     557 bp ds-DNA             PLN       10-APR-1992
DEFINITION  Chroogomphus vinicolor 18S ribosomal RNA gene, partial.
ACCESSION   M90822
KEYWORDS    18S ribosomal RNA.
SOURCE      Chroogomphus vinicolor (library: TDB-1010) basidiocarp DNA.
  ORGANISM  Chroogomphus vinicolor
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Hymenomycetes;
            Agaricales; Gomphidiaceae.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Bruns,T.D. and Szaro,T.M.
  TITLE     Rate and mode differences between nuclear and mitochondrial small
            subunit rRNA genes in mushrooms
  JOURNAL   Mol. Biol. Evol. (1992) In press
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     rRNA            <1..>557
                     /note="central portion of 18S ribosomal RNA gene,
                     sequenced between Ns3 and Ns4 primers, as defined by White
                     et al. (1990) in PCR protocols"
                     /note="sequence starts 48 bases 5' from the start fo the
                     Ns3 primer"
                     /product="18S ribosomal RNA"
                     /gene="18S rRNA"
                     /citation=[1]
BASE COUNT      142 a     98 c    155 g    162 t
ORIGIN
        1 tattaaagtt gttgcagtta aaaagctcgt agttgaactt tgagcttgcc tgggcggtcc
       61 gcctcacggc gctgtactgt ctgggtgggc ttttcctctt ggtgaatcgg cgtgcccttc
      121 attgggtgcg tcggggaacc aggactttta ccttgagaaa attagagtgt tcaaagcagg
      181 ccttttgccc gaatacatta gcatggaata ataaaatagg acgcgcggtt ctattttgtt
      241 ggtttttaga gtcgccgtaa tgattaatag ggacagttgg gggcattagt attcagttgc
      301 tagaggtgaa attcttggat ttactgaaga ctaactactg cgaaagcatt tgccaaggat
      361 gttttcatta atcaagaacg aaggttaggg gatcgaaaac gatcagatac cgttgtagtc
      421 ttaacagtaa actatgccga ctagggatcg ggcgacctct ttttgatgtg tcgctcggca
      481 ccttacgaga aatcaaagtc tttgggttct ggggggagta tggtcgcaag gctgaaactt
      541 aaaggaattg acggaag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Deuteromycete (F.arizonica symbiont) rDNA internal transcribed
Date: 9 Apr 92 10:02:54 GMT
Distribution: bionet
Checksum: 50031     2

LOCUS       FASAITS2      282 bp ds-DNA             PLN       09-APR-1992
DEFINITION  Deuteromycete (F.arizonica symbiont) rDNA internal transcribed
            spacer 2 (isolate p1572)
ACCESSION   X62980
KEYWORDS    26S rRNA gene; 5S rRNA gene; internal transcribed spacer 2.
SOURCE      Festuca arizonica symbiont DNA.
  ORGANISM  Festuca arizonica symbiont
            Eukaryota; Fungi; Eumycota; Deuteromycotina.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Schardl,C.L.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
COMMENT     *source: strain=Festuca arizonica; *source: stage=mycelial culture;
            *source: isolate=p 1572; *source: is_germline=N;
            See also X62978-X62981 & X62986-X62991
            From EMBL    entry DFAITS2;  dated 17-JAN-1992.
FEATURES             Location/Qualifiers
     rRNA            1..95
                     /product="5.8S rRNA nt64-nt158"
     misc_feature    96..243
                     /note="ITS2"
     rRNA            244..282
                     /product="26S rRNA 5'end"
BASE COUNT       61 a     74 c     71 g     76 t
ORIGIN
        1 taatgtgaat tgcagaattc agtgaatcat cgaatctttg aacgcacatt gcgccctctg
       61 gtattccggg gggcatgcct gttcgagcgt cattataacc actcaagctc tcgcttggta
      121 ttggggttcg cggtctcgcg gcccctaaaa tcagtggcgg tgcctgtcgg ctctacgcgt
      181 agtaatactc ctcgcgtctg ggtccgacag gtctacttgc caacaaaacc caatttttta
      241 caggttgacc tcggatcagg tagggatacc cgctgaactt aa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.sativa random single-copy DNA fragment 09RG386R
Date: 10 Apr 92 10:12:03 GMT
Distribution: bionet
Checksum: 33350     2

LOCUS       RIC09RG38R     96 bp ds-DNA             PLN       10-APR-1992
DEFINITION  O.sativa random single-copy DNA fragment 09RG386R
ACCESSION   X57909
KEYWORDS    PCR amplified.
SOURCE      Oryza sativa DNA.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 96)
  AUTHORS   Williams,M.N., Pande,N., Nair,S., Mohan,M. and Bennett,J.E.
  TITLE     Restriction fragment length polymorphism analysis of polymerase
            chain reaction amplified from mapped loci of rice (oryza
            sativa)genomic DNA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=IR 36; *source: sub_strain=indica;
            Entry x57860-x57923 consist of random single-copy DNA fragments,
            which were isolated and mapped to the twelve haploid chromosomes of
            the rice. Apart from their map location, copy number and DNA
            sequence, very little is known about these loci. Names are encoded
            as follows: 01 RG140 F (chromosome, clone, 'F'orward or 'R'everse
            primer)
            By mistake entry x57866-x57899 are mentioned in Gene 107, 229-240.
            From EMBL    entry OS09RG38R;  dated 25-MAR-1992.
BASE COUNT       25 a     22 c     20 g     26 t      3 others
ORIGIN
        1 ctgcagttca atctgattgt ccccatgtat gctggctaat tctatcagcc tagtgcaaag
       61 cgaggacagc caaattgcca gtattttaag cagrrr
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: L.esculentum mRNA for H1 histone-like protein
Date: 10 Apr 92 10:14:01 GMT
Distribution: bionet
Checksum: 47397     3

LOCUS       TOMH1HSTL     551 bp ss-mRNA            PLN       10-APR-1992
DEFINITION  L.esculentum mRNA for H1 histone-like protein
ACCESSION   Z11842
KEYWORDS    histone H1.
SOURCE      Lycopersicon esculentum RNA.
  ORGANISM  Lycopersicon esculentum
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
            Asteridae; Solanales; Solanaceae.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Bray,E.A., Moses,M.S., Cohen,A., Imai,R. and Plant,A.L.
  TITLE     Regulation during environmental stress of an H1 histone-like gene
            by endogenous abscisic acid
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Bray,E.A.
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=cv Ailsa Craig; *source: stage=drought-stressed;
            *source: tissue=leaf; *source: clone_library=cDNA (Cohen and Bray.
            1990. Planta 182:27-33 *source: ; *source: clone=pLE20;
            From EMBL    entry LEH1HSTL;  dated 20-MAR-1992.
FEATURES             Location/Qualifiers
     CDS             <1..312
                     /product="H1 histone-like protein"
                     /codon_start=1
                     /translation="NSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLPKADSKKKPR
                     STRATSTAAKKTEVPKKAKATPKPKKVGAKRTRKSTPAKAKQPKSIKSPAAKRAKKIA
                     V"
     3'UTR           310..520
     polyA_signal    500..504
BASE COUNT      207 a     99 c    126 g    119 t
ORIGIN
        1 aattctgcag caaaggggaa gctaatcaaa atcaaggctt catacaaact atctgaggct
       61 ggaaagaagg agactacaac aaaaacgtct accaaaaagc tccccaaggc cgattctaag
      121 aagaaaccta gaagcaccag ggccacttca actgcagcga agaaaacaga ggtgccgaag
      181 aaagcaaaag cgacgccaaa accgaagaag gttggagcca agaggacaag gaagtctact
      241 ccggcgaagg caaagcaacc aaagtctatc aagtctcctg ctgctaaaag ggccaagaaa
      301 attgcagttt aagcatggcg gtgggataat acagactgta tataagagga ataatggttt
      361 gctgcttgta gctctgtgaa taggaaaaat gaagcttagc ttttactttc agtgtagatc
      421 ttcggtagtg taggtcgggt ttgctgaagt ttggttaatg aaggctctgt atctctgcaa
      481 attaaggcgt tgttctgtca ataatcatct tttttctttc aaaaaaaaaa aaaaaaaaaa
      541 aaaaaaaaaa a
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC16, V3 region.
Date: 7 Apr 92 10:04:15 GMT
Distribution: bionet
Checksum: 52327     2

LOCUS       HIVFLQ25      340 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC16, V3 region.
ACCESSION   M90945
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct PCR
            amplification product of Florida control sample C01 of DNA ID 5246.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
FEATURES             Location/Qualifiers
     CDS             <1..>340
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="EVIIRSENLTDNAKTIIVQLKEPVIINCTRPNNNTRKSIHIGPG
                     KAFDATDIIGDIRQAHCNVSSTEWNNTLREVATKLKGLFGNTTVAFNQSSGGDPDIVI
                     HSFNCGGEFFY"
BASE COUNT      140 a     54 c     66 g     80 t
ORIGIN      near the C2-V3 boundary
        1 gaggtaataa ttagatctga aaatctcaca gacaatgcta aaaccataat agtacagctg
       61 aaggaacctg taataattaa ttgtacaaga cccaacaaca atacaagaaa aagtatacat
      121 ataggaccag ggaaagcatt tgatgcaaca gacataatag gagatataag acaagcacat
      181 tgtaacgtca gtagcacaga atggaataac actttaagag aggtagctac aaaattaaaa
      241 ggactatttg ggaatacaac agtagccttt aatcaatcct caggagggga cccagatatt
      301 gtaatccaca gttttaattg tggaggggaa tttttctact
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rat hemoglobin beta-chain mRNA.
Date: 9 Apr 92 10:05:07 GMT
Distribution: bionet
Checksum: 59722     1

LOCUS       RATBETHEME    212 bp ss-mRNA            ROD       09-APR-1992
DEFINITION  Rat hemoglobin beta-chain mRNA.
ACCESSION   M27173
KEYWORDS    beta-chain; hemoglobin.
SOURCE      Rattus norvegicus (library: lambda EMBL3) adult cDNA to mRNA.
  ORGANISM  Rattus norvegicus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 212)
  AUTHORS   Stevanovic,M., Paunesku,T., Radosavljevic,D., Drmanac,R. and
            Crkvenjakov,R.
  TITLE     variant chromosomal arrangement of adult beta-globin genes in rat
  JOURNAL   Gene 79, 139-150 (1989)
  STANDARD  full staff_entry
BASE COUNT       50 a     55 c     53 g     54 t
ORIGIN
        1 aggctgctgg ttgtctaccc ttggacccag aggtactttt ctaaatttgg ggacctgtcc
       61 tctgcctctg ctatcatggg taacccgcaa gtgaaggccc atggcaagaa ggtgataaat
      121 gccttcaatg atggcctgaa acacttggac aacctcaagg gcacctttgc tcatctgagt
      181 gaactccact gtgacaagct gcatgtggat cc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Boletus satanas mitochondrial small subunit ribosomal RNA gene, 5'
Date: 10 Apr 92 10:04:02 GMT
Distribution: bionet
Checksum: 27648     2

LOCUS       BLSMTA        572 bp ds-DNA             ORG       10-APR-1992
DEFINITION  Boletus satanas mitochondrial small subunit ribosomal RNA gene, 5'
            end.
ACCESSION   M91009
KEYWORDS    small subunit ribosomal RNA.
SOURCE      Mitochondrion Boletus satanas (chromosome Mitochondrion Boletus
            satanas) (library: TDB-1000) basidiocarp DNA.
  ORGANISM  Mitochondrion Boletus satanas
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Hymenomycetes;
            Agaricales; Boletaceae.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Bruns,T.D. and Szaro,T.M.
  TITLE     Rate and mode differences between nuclear and mitochondrial small
            subunit rRNA genes in mushrooms
  JOURNAL   Mol. Biol. Evol. (1992) In press
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     rRNA            1..>572
                     /note="central portion of mitochondrial small rDNA gene,
                     sequenced between MS1 and MS2 primers, as defined by White
                     et al.(1990) in PCR protocols"
                     /product="small subunit ribosomal RNA"
BASE COUNT      230 a     70 c     99 g    173 t
ORIGIN
        1 caatgctcgc aagagtgaac tagctaactg aaatcttaaa tttaatttaa gataaggtaa
       61 gagaaaataa tgatattatc ttactattag tgtcgtctaa atttggtgcc agaagactcg
      121 gtaagacctt agacgcaaac gttaatcgtc ataatcaggc gtaaagggtg tgtaggcggc
      181 tttaaaaaat ataattacat tattataaca ataataaatt cttatagcta aataaattat
      241 attctaatta aagctagaat ctaaaagagg gtaagctaaa caacataatt aattgggact
      301 gacaacttat aataatgtgg agtactaaag gttaaagcta tttatctact taagattgac
      361 gctcagaaac gaaggggaga ataagaaact tagattagag acctaattat ctctctcagt
      421 caacgatgaa tggtagttat taaaatttaa aatatataat aaagataata tataattatt
      481 tttattgtat agatattagt gacgaggtta acacgatgac cattccgcct tgttagtaag
      541 actgcaaagt tgaaaacaaa aaaattagtc gg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: B.anserina 16S ribosomal RNA.
Date: 9 Apr 92 10:02:13 GMT
Distribution: bionet
Checksum: 21987     3

LOCUS       BORRRDK      1475 bp ss-rRNA            RNA       09-APR-1992
DEFINITION  B.anserina 16S ribosomal RNA.
ACCESSION   M64312
KEYWORDS    16S ribosomal RNA.
SOURCE      B.anserina rRNA.
  ORGANISM  Borrelia anserina
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes;
            Spirochaetales; Spirochaetaceae.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Marconi,R.T. and Garon,C.F.
  TITLE     Phylogenetic analysis of the genus Borrelia: A comparison of North
            American and European isolates of B. burgdorferi
  JOURNAL   J. Bacteriol. 174, 241-244 (1992)
  STANDARD  full staff_entry
BASE COUNT      422 a    271 c    417 g    336 t     29 others
ORIGIN
        1 aataacgaag agtttgatcc tggcttagaa ctaacgctgg cagtgcgtct taagcatgca
       61 agtcagacgg gatgtagcaa tacattcagt ggcgaacggg tgagtaacgc gtggataatc
      121 tacctatgag atgggataac tattagaaat agtagctaat accgaataag gtcaattaag
      181 atgttaattg atgaaaggaa gcctttaaac gtcgcttgta gacgagtctg cgtcttatta
      241 gctagttggt ngggtaaagg cctaccaagg ctatgataag taaccggcct gagagggtga
      301 acggtcacac tggaactgag atacggtcca gactcctacg gaggcagcag cctagaatct
      361 tccgcaatgg gcgaaagcct gacggagcga cactgcgtga acgaagaagg tcgaaagatt
      421 gtaaagttct tttataaatg aggaataagc tttgtaggaa atgataaagc gatgacgtta
      481 atttatgaat aagccccggc taattacgtg ccagcagccg cggtaatacg taagggnnna
      541 gcgttgttcg ggattantgg gcgtaaaggt gagtaggcgg atatgcaagt ctatgcgtaa
      601 aataccacag ctcaactgtg gagctatgct agaaactgca tgactagagt ctgatagggg
      661 aagttagaat tcctggtgta ggggtggaat ctgttgatat caggaagaat accagaggcg
      721 aaggcgaact tctgggtcaa gactgacgct gagtcacgaa agcataggga gcaaacagga
      781 ttagataccc tggtagtcta tgctgtaaac gatgcacact tggtgttaat cgaaaggtta
      841 gtaccgaagc taacgtgtta agtgtgccgc ctggggagta tgctcgcaag agtgaaactc
      901 aaaggaattg acgggggccc gcacaagcgg tggagcatgt ggtttaattc gannnnnnnc
      961 gaggaacctt accagggctt gacntataca ggatgtagtt agagataact attccccgtt
     1021 tggggnctgt atacaggtgc tgcatggttg tcgtcagctc gtgctgtgag gtgttggtta
     1081 agtcccgcaa cgagcgcaac ccttatggtc tgttaccagc atgtaaagat ggggactcag
     1141 acgagactgc cggtgataag ccggaggaag gtggggatga cgtcaaatca tcatggccct
     1201 tatgtcctgg gctacacacg tgctacaatg gcctgtacaa agcgaagcga aacagtgatg
     1261 tgaagcaaaa cgcataaagc aggtctcagt ccagattgaa gtctgaaact cgacttcatg
     1321 aagttggaat cgctagtaat cgtatatcag aatgatacgg tgaatacgtt ctcgggcctt
     1381 gtacacaccn cccgtcacan nacccgagtt gaggatnccc gaagctattn nncnaannnn
     1441 nnngggagga aggtatctaa ggtatgtttg gtgag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC01D, V3 region.
Date: 7 Apr 92 10:04:55 GMT
Distribution: bionet
Checksum: 21802     2

LOCUS       HIVFLQ5D      303 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC01D, V3 region.
ACCESSION   M90914
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct sequencing of
            proviral DNA, DNA ID 5240.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is a direct sequence over the V3 region
            obtained by the CDC from this Florida control sample.  2 clones are
            also available over this region from this individual.
FEATURES             Location/Qualifiers
     CDS             <1..>303
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="RSENFTNNAKIIIVHLNKTVNITCTRPNNNTRRSIPIGPGKAFY
                     TTDIIGNIRQAHCNLSRAEWNNTLKQIVKKLREQFKNKTIVFNHSSGGDPEIVMHSF"
BASE COUNT      138 a     47 c     46 g     72 t
ORIGIN      near the C2-V3 boundary
        1 agatctgaaa atttcacgaa taatgctaaa atcataatag tacacctgaa taaaactgta
       61 aatattactt gtacaagacc caacaacaat acaagaagaa gtatacctat aggaccaggg
      121 aaagcatttt atacaacaga cataatagga aatataagac aagcacattg taaccttagt
      181 agagcagaat ggaataacac tttaaaacag atagttaaaa aattaagaga acaatttaag
      241 aataaaacaa tagtctttaa tcactcctca ggaggggacc cagaaattgt aatgcacagt
      301 ttt
//