From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Sciara coprophila retrotransposable element R2 reverse
Date: 4 Sep 92 10:07:06 GMT
Distribution: bionet
Checksum: 48068     6

LOCUS       SCIRTRANSB   2829 bp ds-DNA             INV       04-SEP-1992
DEFINITION  Sciara coprophila retrotransposable element R2 reverse
            transcriptase gene, 3' end.
ACCESSION   L00951
KEYWORDS    retrotransposable element R2; reverse transcriptase.
SOURCE      Sciara coprophila (library: Charon 4A (from A. Kerrebrock)) DNA.
  ORGANISM  Sciara coprophila
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Diptera; Nematocera;
            Bibionoidea; Sciaridae.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Burke,W.D., Eickbush,D.G., Xiong,Y., Jakubczak,J.L. and
            Eickbush,T.H.
  TITLE     Sequence relationship of retrotransposable elements R1 and R2
            within and between divergent insect species
  JOURNAL   Mol. Biol. Evol. (1993) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <2..2611
                     /product="reverse transcriptase"
                     /codon_start=1
                     /translation="VSVPPTSYRDRIMNALEESMIDVDAIRGSSARELVEIGKVALLN
                     QPMDEGRIMSWLSDRFPDTQKPKGPIYSKTTIYHGTNKQKRKQRYALVQSLYKKDISA
                     AARVVLDENDKIATKIPPVRHMFDYWKDVFATGGGSAATNINRAPPAPHMETLWDPVS
                     LIEIKSARASNEKGAGPDGVTPRSWNALDDRYKRLLYNIFVFYGRVPSPIKGSRTVFT
                     PKIEGGPDPGVFRPLSICSVILREFNKILARRFVSCYTYDERQTAYLPIDGVCINVSM
                     LTAIIAEAKRLRKELHIAILDLVKAFNSVYHSALIDAITEAGCPPGVVDYIADMYNNV
                     ITEMQFEGKCELASILAGVYQGDPLSGPLFTLAYEKALRALNNEGRFDIADVRVNASA
                     YSDDGLLLAMTVIGLQHNLDKFGETLAKIGLRINSRKSKTVSLVPSGREKKMKIVSNR
                     RLLLKASELKPLTISDLWKYLGVVYTTSGPEVAKVSMDDDLSKLTKGPLKPQQRIHLL
                     KTFVIPKHLNRLVLSRTTATGLCKMDLLIRKYVRRWLRLPGDVPVAFLYAPVKAGGKG
                     IPCLKQWIPLMRFLRLNKAKRTGGDRIAAVLNCQLYASISHSCKTGPVSVGLWRSTNT
                     GGLSAYWRRILIGMVDGKDLKSAQNHSSATSFNSIRMNDISGEDYIHYNQLRTNSIPT
                     RKRTARGRPNKPTACRAGCDKLKRLQHDIQGCIRSQGGLVQRHDRVVDLLFDECETKG
                     YAAEKVVHLRTSEELWKPDLVLKKNGRVVVVDAQVVQCGRLESDHRVKVSKYRDDPEL
                     ADVIREKYAVQEVTFEACTLSYKGIWSKNSVEGLQKLGISNYCLFKIVTSVLRGSWLN
                     WVRFNNVTTVVHW"
     3'UTR           2612..2829
BASE COUNT      815 a    548 c    731 g    735 t
ORIGIN
        1 cgttagcgtt cccccgacgt cgtaccgcga tcggatcatg aatgcgttgg aggagagtat
       61 gatcgacgtg gatgcgatta ggggtagttc tgctagagaa cttgttgaga ttggtaaggt
      121 agcactgcta aaccagccca tggatgaggg aagaattatg agctggttgt ctgatcggtt
      181 cccagatacc caaaagccta agggaccgat ctatagcaag actactattt accacggtac
      241 caataaacag aagagaaagc aaaggtatgc acttgtgcaa tctttgtata agaaagacat
      301 cagcgctgcc gccagagtag ttttagatga gaatgacaag atagcgacta agataccacc
      361 agtacgacat atgttcgatt actggaaaga cgtctttgcc acaggtggtg ggagtgcagc
      421 cacaaacatt aatcgagctc ctcctgcgcc acatatggaa acattgtggg accctgtgtc
      481 attgatagag atcaagtcag ctcgagcctc taacgaaaaa ggtgcagggc ctgatggagt
      541 cactcctaga tcatggaatg ctttggatga taggtataaa cgcctattgt acaatatttt
      601 tgtgttctat ggacgggtac cgtcgccgat caaaggctca cgaactgtat ttacgccgaa
      661 gatagaaggt ggtcctgacc ctggcgtctt tcgtcctcta tctatatgct cagtcatctt
      721 gcgtgagttt aacaaaattc tcgcaagacg atttgtatca tgttatacat atgatgaaag
      781 gcaaactgca tatttgccga ttgatggggt gtgtatcaat gtgagtatgc tcactgctat
      841 tatagcagaa gctaaacgat tgagaaagga gttgcacatt gctatacttg acttagtcaa
      901 agcattcaac tctgtgtatc attcggctct cattgatgcg ataacggaag ctggctgccc
      961 cccgggggtt gtcgactata tagccgatat gtataataat gtaataactg aaatgcagtt
     1021 cgaaggcaag tgtgaactgg ctagtatact tgcaggtgtc taccagggtg atccactcag
     1081 tggaccactt ttcactcttg catatgagaa agctttgagg gctctcaaca atgaaggtag
     1141 gtttgacata gctgacgtta gagtcaatgc tagtgcctac tcggatgatg ggttattgct
     1201 tgcaatgact gtcattggtc tacagcacaa cctggataag tttggcgaga ccttggcgaa
     1261 aattggtctg aggattaact ccagaaagtc gaaaacggtt tctttggttc cctcggggag
     1321 ggaaaagaaa atgaagatag tcagtaatag gcgattactg ttgaaggcca gcgaattgaa
     1381 gcccttgact atctctgacc tatggaaata tttgggtgtt gtatatacga cgtcaggtcc
     1441 ggaagttgcg aaagtaagca tggacgatga tctgtctaaa ttaactaaag gtccattaaa
     1501 accacagcag cgaatacacc tgctgaaaac atttgttata ccgaaacatc tgaaccggct
     1561 ggtcctctcg aggacaacag caaccggttt atgcaaaatg gaccttttga tacgtaaata
     1621 tgtacgccgc tggttacgtc ttccaggcga tgtaccagtt gccttcctgt atgcgccagt
     1681 aaaggcgggt ggaaagggta taccgtgttt aaagcaatgg atcccgttga tgcgattctt
     1741 gaggcttaac aaggctaaga gaacaggggg tgatagaatt gctgcagttt taaactgtca
     1801 gttgtacgct agcattagtc atagctgtaa aacaggccct gtcagtgttg ggttgtggag
     1861 atcaaccaac actggagggt tatcagccta ttggcggagg atattgattg gcatggttga
     1921 cggaaaggat ttgaagtcag cccaaaacca ctcatctgca acgtccttta acagcatccg
     1981 aatgaatgac attagtggtg aagactacat tcactacaat caactgcgaa cgaacagcat
     2041 accaacgagg aagcggactg cccgcggtag gcctaacaaa cctaccgcat gtagggcagg
     2101 atgcgacaag ttgaaacgtc tgcaacatga cattcaagga tgtattagga gtcagggtgg
     2161 attagttcaa cggcatgacc gagtagtcga tttactgttt gacgaatgtg agacgaaagg
     2221 ttatgctgct gagaaagtag ttcatctacg gacctcagaa gaactatgga agccggactt
     2281 ggttttaaag aagaatggga gagtagtcgt tgtagatgct caggtcgtac agtgtggtag
     2341 gctcgaatcc gaccacaggg tgaaagtatc caaataccgt gacgaccctg aacttgcaga
     2401 tgtgataagg gagaagtatg cagttcagga ggttacgttt gaagcatgta cgctatcgta
     2461 caaaggtatt tggagtaaga acagcgtcga aggactgcaa aaattaggta taagcaatta
     2521 ttgcttattc aagattgtga cttcagtcct tcgagggtcg tggttgaact gggtcaggtt
     2581 caacaacgta accaccgtgg tgcattggta gctccggcta gagcattctt gataacaggg
     2641 ttttctggga atatccattc atgcgcgtga ggcgcaatac actgattata aagtctaata
     2701 caaattccta taatacgggg gggtgtcgcg tgatgatgag gcaaagaaat gtgttaatta
     2761 tccggggagg atactgatct tttgttttaa acataattaa cctcattctg atgacatcaa
     2821 cctggctac
//