From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Equine infectious anemia virus (gag) gene; (pol) gene, 5' end.
Date: 21 Dec 92 20:41:17 GMT
Distribution: bionet
Checksum: 27188 6

LOCUS       EIAGAGPOL    2239 bp ds-RNA             VRL       19-NOV-1992
DEFINITION  Equine infectious anemia virus (gag) gene; (pol) gene, 5' end.
ACCESSION   L06609
KEYWORDS    gag gene; pol gene.
SOURCE      Equine infectious anemia virus (strain WSU5) cDNA to genomic RNA.
  ORGANISM  Equine infectious anemia virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   McGuire,T.C., O'Rourke,K.I., Baszler,T.O., Leib,S.R. and
            Brassfield,A.L.
  TITLE     Expression of Functional Protease and Subviral Particles by
            Vaccinia Virus Containing Equine Infectious Anemia Virus gag and
            5'pol Genes
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             48..1586
                     /partial
                     /note="gag"
                     /gene="gag"
                     /codon_start=1
                     /translation="DPRDSRGELTEVFWRCSWPEHRRTGKMGDPLTWSKALKKLEKVT
                     VQGSQKLTTGNCNWALSLVDLFHDTNFVKEKDWQLRDVIPLLEDVTQTLSGQEREAFE
                     RTWWAISAVKMGLQINNVVDGKASFQLLRAKYEKKTANKKQSEPSEEYPIMIDGAGNR
                     NFRPLTPRGYTTWVNTIQTNGLLNEASQNLFGILSVDCTSEEMNAFLDVVPGQAGQKQ
                     ILLDAIDKIADDWDNRHPLPNAPLVAPPQGPIPMTARFIRGLGVPRERQMEPAFDQFR
                     QTYRQWIIEAMSEGIKVMIGKPKAQNIRQGAKEPYPEFVDRLLSQIKSEGHPQEISKF
                     LTDTLTIQNANEECRNAMRHLRPEDTLEEKMYACRDIGTTKQKMMLLAKALQTGLAGP
                     FKGGALKGGPLKAAQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVPKNGKQ
                     GAQGRPQKQTFPIQQKSQHNKSVVQETPQTQNLYPDLSEIKKEYNVKEKDQVEDLNLD
                     SLWE"
     CDS             1343..>2239
                     /note="pol"
                     /gene="pol"
                     /codon_start=1
                     /translation="TAWTFLKAMQKCSKKREARGSREAPETNFPDTTEESAQQICCTR
                     DSSDSKSVPRSERNKKGIQCQGEGSSRGSQPGQFVGVTYNLEKRPTTIVLINDTPLNV
                     LLDTGADTSVLTTAHYNRLKYRGKKYQGTGIIGVGGNVETFSTPVTIKKKGRHIKTRM
                     LVADIPVTILGRDILQDLGAKLVLAQLSKEIKFRKIELKEGTMGPKIPQWPLTKEKLE
                     GAKEIVQRLLSEGKISEASDNNPYNSPIFVIKKRSSKWRLLQDLRELNKTVQVGTEIS
                     RGLPHPGGLIKCKHMTVLDIGDA"
BASE COUNT      819 a    380 c    529 g    511 t
ORIGIN      
        1 acctgagagg ggcgcagacc ctacctgttg aacctggctg atcgtaggat ccccgggaca
       61 gcagaggaga acttacagaa gtcttctgga ggtgttcctg gccagaacac aggaggacag
      121 gtaagatggg agaccctttg acatggagca aggcgctcaa gaagttagag aaggtgacgg
      181 tacaagggtc tcagaaatta actactggta actgtaattg ggcgctaagt ctagtagact
      241 tatttcatga taccaacttt gtaaaagaaa aggactggca gctgagggat gtcattccat
      301 tgctggaaga tgtaactcag acgctgtcag gacaagaaag agaggccttt gaaagaacat
      361 ggtgggcaat ttctgctgta aagatgggcc tccagattaa taatgtagta gatggaaagg
      421 catcattcca gctcctaaga gcgaaatatg aaaagaagac tgctaataaa aagcagtctg
      481 agccctctga agaatatcca atcatgatag atggggctgg aaacagaaat tttagacctc
      541 taacacctag aggatatact acttgggtga ataccataca gacaaatggt ctattaaatg
      601 aagctagtca aaacttattt gggatattat cagtagactg tacttctgaa gaaatgaatg
      661 catttttgga tgtggtacct ggccaggcag gacaaaagca gatattactt gatgcaattg
      721 ataaaatagc agatgattgg gataatagac atccattacc gaatgctcca ctggtggcac
      781 caccacaagg gcctattccc atgacagcaa ggtttattag aggtttagga gtacctagag
      841 aaagacagat ggagcctgct tttgatcagt ttaggcagac atatagacaa tggataatag
      901 aagccatgtc agaaggcatc aaagtgatga ttggaaaacc taaagctcaa aatattaggc
      961 aaggagctaa ggaaccttac ccagaatttg tagacagact attatcccaa ataaaaagtg
     1021 agggacatcc acaagagatt tcaaaattct tgactgatac actgactatt cagaacgcaa
     1081 atgaggaatg tagaaatgct atgagacatt taagaccaga ggatacatta gaagagaaaa
     1141 tgtatgcttg cagagacatt ggaactacaa aacaaaagat gatgttattg gcaaaagcac
     1201 ttcagactgg tcttgcgggc ccatttaaag gtggagcctt gaaaggaggg ccactaaagg
     1261 cagcacaaac atgttataac tgtgggaagc caggacattt atctagtcaa tgtagagcac
     1321 ctaaagtctg ttttaaatgt aaacagcctg gacatttctc aaagcaatgc agaagtgttc
     1381 caaaaaacgg gaagcaaggg gctcaaggga ggccccagaa acaaactttc ccgatacaac
     1441 agaagagtca gcacaacaaa tctgttgtac aagagactcc tcagactcaa aatctgtacc
     1501 cagatctgag cgaaataaaa aaggaataca atgtcaagga gaaggatcaa gtagaggatc
     1561 tcaacctgga cagtttgtgg gagtaacata taatctagag aaaaggccta ctacaatagt
     1621 attaattaat gatactccct taaatgtact gttagacaca ggagcagata cttcagtgtt
     1681 gactactgca cattataata ggttaaaata tagagggaaa aaatatcaag ggacgggaat
     1741 aataggagtg ggaggaaatg tggaaacatt ttctacgcct gtgactataa agaaaaaggg
     1801 tagacacatt aagacaagaa tgctagtggc agatattcca gtgactattt tgggacgaga
     1861 tattcttcag gacttaggtg caaaattggt tttggcacag ctctccaagg aaataaaatt
     1921 tagaaaaata gagttaaaag agggcacaat ggggccaaaa attcctcaat ggccactcac
     1981 taaggagaaa ctagaagggg ccaaagagat agtccaaaga ctattgtcag agggaaaaat
     2041 atcagaagct agtgacaata atccttataa ttcacccata tttgtaataa aaaagaggtc
     2101 tagcaaatgg aggttattac aagatctgag agaattaaac aaaacagtac aagtaggaac
     2161 ggaaatatcc agaggattgc ctcacccggg aggattaatt aaatgtaaac acatgactgt
     2221 attagatatt ggagatgca
//