From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Frankia sp. 5S, 16S, and 23S ribosomal RNA genes, complete
Date: 5 Nov 92 23:06:04 GMT
Distribution: bionet
Checksum: 44587 10

LOCUS       FRARRNAB     6481 bp ds-DNA             BCT       15-APR-1991
DEFINITION  Frankia sp. 5S, 16S, and 23S ribosomal RNA genes, complete
            sequences.
ACCESSION   M55343 M58598
KEYWORDS    16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA.
SOURCE      Frankia sp. (strain ORS020606) DNA.
  ORGANISM  Frankia sp.
            Prokaryotae; Firmicutes; Thallobacteria; Actinomycetes and related
            organisms; Actinomycetes with multilocular sporangia.
REFERENCE   1  (bases 1 to 6481)
  AUTHORS   Normand,P., Cournoyer,B., Simonet,P. and Nazaret,S.
  TITLE     Analysis of a ribosomal RNA operon in the actinomycete Frankia
  JOURNAL   Gene 111, 119-124 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     promoter        117..146
                     /note="putative"
     promoter        248..276
                     /note="putative"
     rRNA            528..2039
                     /product="16S ribosomal RNA"
                     /gene="16S rRNA"
     rRNA            2451..5549
                     /product="23S ribosomal RNA"
                     /gene="23S rRNA"
     rRNA            5618..5736
                     /product="5S ribosomal RNA"
                     /gene="5S rRNA"
     terminator      5737..5789
     promoter        5841..5869
                     /note="putative"
     CDS             5927..>6481
                     /note="open reading frame"
                     /codon_start=1
                     /translation="MSSDAMSSDNRHEPAATLHTPAHPVRIVTAASLFDGHDAAINIM
                     RRLLQAQGAEVIHLGHDRSVEEVVTAAIQEDAQGIALSSYQGGHVEYFSYLIERLRAR
                     GAGNVRVYGGGGGVILPAEIDLLHARGVARIFSPQDGQRLGLAKMINMIIEACDVDLT
                     EDGPKLDAVAAGEHGALARAITVLE"
BASE COUNT     1333 a   1592 c   2268 g   1288 t
ORIGIN      
        1 agatctcctc cgagggggcg tagacccccc gaggaaacgg gccgcggacg gtgcgataag
       61 gtacgagagt ggcaaacacc ggtacgtggg taggttaact accgggccgg agtgatttga
      121 cacaatcaag ccaaagctca taatctagga aaaacgttcc ggttgatcgc tttgaacgcg
      181 aacgtccgga gtgtgcaaga aggtaagatc tgttcggatg tgaacatttc gcacaaaaag
      241 aagcgatttg acaccgccgg gcaagccgag taacttaaag aagcaccaga acgaagccct
      301 gagggtggag gtctggtagc gcctgctcct tgagaactca acagcgtgcc gattgtcagt
      361 gccaattgtt ttaccccgtt catggcctgg ctgggtggtg tcccacgtgg tggggtggct
      421 gtctggttgg gttgtgaggg attcctttgg acacggtggt gggcctgtga gggtctgctg
      481 tcgatgtcgg ggtctgtcga tgtttttgca tcggcgctct caatgcattg atggagagtt
      541 tgatcctggc tcaggacgaa cgctggcggc gtgcttaaca catgcaagtc gagcggggag
      601 cttcggctct cagcggcgaa cgggtgagta acacgtgggc aacctgcccc gagctctgga
      661 ataacctcgg gaaaccgggg ctaatgccgg atatgacatt gccgggcatc tggtggtgtg
      721 gaaagattta tcggctcggg atgggcccgc ggcctatcag cttgttggtg gggtgatggc
      781 ctaccaaggc gacgacgggt agccggcctg agagggcgac cggccacact gggactgaga
      841 cacggcccag actcctacgg gaggcagcag tggggaatat tgcgcaatgg gcggaagcct
      901 gacgcagcga cgccgcgtgg gggatgacgg ccttcgggtt gtaaacctct ttcagcaggg
      961 acgaagcgag agtgacggta cctgcagaag aagcaccggc caactacgtg ccagcagccg
     1021 cggtaatacg tagggtgcaa gcgttgtccg gaattattgg gcgtaaagag ctcgtaggcg
     1081 gcctgttgcg tcggctgtga aaacccgggg ctcaactccg ggcctgcagt cgatacgggc
     1141 aggctagagt ccggcagggg agactggaat tcctggtgta gcggtgaaat gcgcagatat
     1201 caggaggaac accggtggcg aaggcgggtc tctgggccgg aactgacgct aaggagcgaa
     1261 agcgtgggga gcgaacagga ttagataccc tggtagtcca cgccgtaaac gttgggcgct
     1321 aggtgtgggg gaccttccac ggcctccgtg ccgcagctaa cgcattaagc gccccgcctg
     1381 gggagtacgg ccgcaaggct aaaactcaaa ggaattgacg ggggcccgca caagcggcgg
     1441 agcatgtggc ttaattcgat gcaacgcgaa gaaccttacc agggcttgac atgcagggaa
     1501 atctcgtaga gatacggggt ccgtaagggt cctgcacagg tggtgcatgg ctgtcgtcag
     1561 ctcgtgtcgt gagatgttgg gttaagtccc gcaacgagcg caaccctcgt cctatgttgc
     1621 cagcgagtcg tgtcggggac tcataggaga ctgccggggt caactcggag gaaggtgggg
     1681 atgacgtcaa gtcatcatgc cccttacgtc ctgggctgca cacatgctac aatggccggt
     1741 acaaagggct gcgatgccgt gaggtggagc gaatcccaaa aagccggtct cagttcggat
     1801 cggggtctgc aactcgaccc cgtgaagtcg gagtcgctag taatcgcaga tcagcaatgc
     1861 tgcggtgaat acgttcccgg gccttgtaca caccgcccgt cacgtcacga aagtcggtaa
     1921 cacccgaagc cggtggccta acccttgtgg ggggagccgt cgaaggtggg accggcgatt
     1981 gggacgaagt cgtaacaagg tagccgtacc ggaaggtgcg gctggatcac ctcctttcta
     2041 aggagcgtct ggctggtctg tcctgtagtg gggtgggctg gtgcagagcc agggccggct
     2101 gtggatgccg gtctggttgc tcgtgggtgg aacgctgacg atggggtttc ggctggttgt
     2161 ccggggtcta gtactcctct gtccttatct tcgggtgggg tggggggtgg aacggtccgg
     2221 gtgggtggct ggggtccgtg gcacgctgtt gggtcctgag ggagtgaggc tctctcggct
     2281 ggtgggttcc tgtgctgtgg tcctggtggg gatcgtggtg gggggtctgc tggtggaacg
     2341 gaccggtcgt ggtggaggac tgccttcccg ttgggtgggg gtgggtttcg ccgggtcggc
     2401 tggggccgtc cgtacgttga gaactgcaca gtggacgcga gcatctttgt ggccaagtta
     2461 ttaagggcgc acggtggatg ccttggcacc aggagccgat gaaggacgtg ggaggctgcg
     2521 atatgcctcg gggagctgtc aaccgagctg tgatccgagg atttccgaat ggggaaaccc
     2581 ggcagggctt taaatcctgt cacccgtgcc tgaacacata gggcatgtgg agggaacgcg
     2641 gggaagtgaa acatctcatt acccgcagga ggagaaaaca accgtgattc cgcgagtagt
     2701 ggtgagcgaa agcggaacag gctaaaccag tgtcgtgtga gagccggcag gtgttgcgat
     2761 gctggggttg tgggatcgtc caggtggagc tgccgttcca tcggggagtc agaaagagca
     2821 ttgttaggcg aaggtcatgc gaatgggccg ccatagaggg taatagccct gtagccgaaa
     2881 gcagtgttcc tcccggacgt gttcccaagt agcacggagc ccgtgtaatt ccgtgtgaat
     2941 ctggcgggac cacccgctaa gcctaaatac tccctggtga ccgatagcgg actagtaccg
     3001 tgagggaaag gtgaaaagta ccccgggagg ggagtgaaat agtacctgaa accgtgtgcc
     3061 tacaatccgt gggagctgga ctgtggtctg gtgaccgcgt gccttttgaa gaatgagcct
     3121 gcgagtttgc ggtgtgtggc gaggttaacc cgtgtggggt agccgtagcg aaagcgagtc
     3181 cgaagagggc gttgagtcgc atgtccaaga cccgaagccg agtgatctac ccatggccag
     3241 gttgaagcgc gggtaagacc gtgtggagga ccgaacccac cagggttgaa aacctggggg
     3301 atgagctgtg ggtaggggtg aaaggccaat caaactcggt gatagctggt tctccccgaa
     3361 atgcatttag gtgcagcgtc gcatgtttct tgccggaggt agagcactgg atggcctagg
     3421 gggcccacaa gcttactgaa gtcagccaaa ctccgaatgc cggtaagtga agtgcggcag
     3481 tgagactgcg ggggataagc ttcgtagtcg agagggaaac agcccagatc gccagctaag
     3541 gcccctaagc gtgcgctaag tggaaaagga tgtggagtcg catagacaac caggtggtgc
     3601 ttagaagcag ccacccttga aagagtgcgt aatagctcac tggtcaagtg attccgcgcc
     3661 gacaatgtag cggggctcaa gcgcaccgcc gaagctgcgg catgcacaaa atttcccggc
     3721 actttggtgt ccaggtttgt gtgtgggtag gggagcgtcg tgtggcgtgt gaagcggcgg
     3781 ggtgacccag ccgtggatgc catacgagtg agaatgcagg catgagtagc gaatgacggg
     3841 tgagaaaccc gtccgccgga tgaccaaggg ttcctggggc aggctaatcc gcccagggtg
     3901 agtcgggacc taaggcgagg ccgacaggcg tagtcgatgg ataacgggtt gatattcccg
     3961 taccggcgtt gacgcggcca tgctgaacct ggtttgtgct aaccatctga tcggatgtgt
     4021 ctcttcggag gtgtgttcgg gagggtggga tcccggctgg tagtaggcaa gcgatggggt
     4081 gacgaggaag gtagtccagc ccaggcggtg gttgtcctgg ggcaagggtg taggacgagg
     4141 cgtaggtaaa tccgcgtctt gtgtgtctga gacctgatgc cgagccgatt gcggcgaagt
     4201 gggtgatcct atgctgccga gaaaagcctc tagcgagtgt cagggccgcc cgtaccctaa
     4261 accgacacag gaggtcaggt agagaatacc gaggcgttcg agtgaactgt ggttaaggaa
     4321 ctcggcaaat gccccgtaac ttcggagaag gggggccgtt ctccgtgtag gggtttacct
     4381 ccgaagcggg gagtggccgc agagaccagg ggaaagcgac tgtttactaa aaacacagct
     4441 ccgtgctaag tcgtaagacg atgtatacgg agtgacgcct gcccggtgct ggaacgttaa
     4501 ggggacgggt tagctcttcg gggcgaagct cagaacttaa gcgccagtaa acggcggtgg
     4561 taactataac catcctaagg tagcgaaatt ccttgtcggg taagttccga cctgcacgaa
     4621 tggcgtaacg actttcccac tgtctcaacc acagactcgg cgaaattgca ttacgagtaa
     4681 agatgctcgt tacgcgcggc aggacggaaa gaccccggga cctttactat agcttgatat
     4741 tggtgttcgg ttcggcttgt gtaggatagg tgggagactg tgaagctagg acgccagttc
     4801 tggtggagtc gttgttgaaa taccactctg gtcgtactgg atgtctaacc tgggtccgtg
     4861 atccggatca gggacagtgt caggtgggta gtttaactgg ggcggttgcc tcctaaaggg
     4921 taacggaggc gcccaaaggt tccctcagcc tggttggcaa tcaggtgttg agtgcaagtg
     4981 cacaagggag cttgactgtg agacagacat gtcgagcagg tgcgaaagca gggactagtg
     5041 atccggcggt ggcttgtgga agcgccgtcg ctcaacggat aaaaggtacc ccggggataa
     5101 caggctgatc ttgcccaaga gtccatatcg acggcaaggt ttggcacctc gatgtcggct
     5161 cgtcgcatcc tggggctgga gtaggtccca agggttgggc tgttcgccca ttaaagcggt
     5221 acgcgagctg ggtttagaac gtcgtgagac agttcggtcc ctatccgccg cgcgcgcagg
     5281 agacttgaga agggctgtcc ctagtacgag aggaccggga cggacgaacc tctggtgtgc
     5341 cagttgttct gccaagggca tggctggttg gctacgttcg gaagggataa ccgctgaaag
     5401 catctaagcg ggaagcctgc ttcgagatga ggtctcccac agggtagcct ggtaaggccc
     5461 ccgactagat gatcgggttg ataggccgga ggtggaagtg cggtgacgca tggagctgac
     5521 cggtactaat aggccgaggg cttgtcttcg aaggtgctac gcgtccactg tgcggttctc
     5581 gggtgtacgg ccggttcggc tggtatatct ggatagtgtt tcggtggttt tggcgaaggg
     5641 gaaacgcccg gtctcattcc gaacccggaa gctaagctct tcagcgccga tggtactgca
     5701 tgggggactg tgtgggagag taggacgccg ccggacgtat acgagtgtgg ggctgtctcc
     5761 ctagggagac agccccacac tcgtatacgc gtattttccg actactggct ggagcacccg
     5821 cttcagcacc ttggccgtgg tggcatctat tacatggatg tcctactatc gggagccaag
     5881 tgttctaggt atctcgcccg ccacatcgtc cccgggagcc gcttcgatgt cctccgacgc
     5941 gatgtcctcc gacaaccggc acgagccggc cgccacgctg cacacaccag ctcatccggt
     6001 ccggatcgtg acggcggcct cactcttcga tgggcatgac gcggcgatca acatcatgcg
     6061 tcgcctgttg caggcgcagg gcgccgaagt gatccatctc gggcatgacc gcagcgtcga
     6121 ggaggtcgtc accgccgcga tccaggagga cgcccagggg atcgccctgt cgtcctatca
     6181 gggcgggcat gtcgagtact tcagctacct catcgagcgc ctccgtgcgc gcggagccgg
     6241 caacgtccgg gtctacggcg gcggcggcgg ggtgatcctg ccggcggaga tcgacctgct
     6301 gcacgcgcgc ggggtcgcgc gcatcttctc cccgcaggac gggcagcggc tcggtctcgc
     6361 aaagatgatc aatatgatca tcgaggcctg tgacgtcgat ctgacggagg acgggccgaa
     6421 gctcgatgcg gtggcggctg gtgagcacgg cgcgctcgcc cgggcgatca ccgtgctcga
     6481 g
//