From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rhesus macaque polyoma virus large T antigen gene, 3' end.
Date: 31 Dec 92 01:40:40 GMT
Distribution: bionet
Checksum: 21344 4

LOCUS       SV4LTA        391 bp ds-DNA             VRL       17-DEC-1992
DEFINITION  Rhesus macaque polyoma virus large T antigen gene, 3' end.
ACCESSION   M99347
KEYWORDS    large T antigen.
SOURCE      Rhesus macaque polyomavirus (strain A2895) (library: ATCC VR-305)
            DNA.
  ORGANISM  Rhesus macaque polyomavirus
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
            Polyomaviruses.
REFERENCE   1  (sites)
  AUTHORS   van Heuverswyn,H. and Fiers,W.
  TITLE     Nucleotide sequence of the Hind-C fragment of Simian Virus 40 DNA:
            comparison of the 5'-untranslated region of wild-type virus and of
            some deletion mutants
  JOURNAL   Eur. J. Biochem. 100, 51-60 (1979)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Ilyinskii,P.O., Daniel,M.D., Horvath,C. and Desrosiers,R.C.
  TITLE     Genetic analysis of simian virus 40 from brains and kidneys of
            macaque monkeys
  JOURNAL   J. Virol. 66, 6353-6360 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     mutation        replace(23^24,"ggtgtg")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2713-2718 in SV40 strain 776"
     variation       replace(26,"a")
                     /citation=[1]
                     /note="nucleotide 2721 in SV40 strain 776"
     variation       replace(56,"a")
                     /citation=[1]
                     /note="nucleotide 2751 in SV40 strain776"
     variation       replace(62,"g")
                     /citation=[1]
                     /note="nucleotide 2757 in SV40 strain 776"
     mutation        replace(71^72,"ttatga")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2767-2772 in SV40 strain 776"
     mutation        replace(80..90,"ag")
                     /citation=[1]
                     /note="absent in SV40 strain 776"
     variation       replace(100,"a")
                     /citation=[1]
                     /note="nucleotide 2792 in SV40 strain 776"
     mutation        replace(206^207,"tggctgtcttca")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2899-2910 in SV40 strain 776"
     variation       replace(235,"c")
                     /citation=[1]
                     /note="nucleotide 2939 in SV40 strain 776"
     variation       replace(246,"a")
                     /citation=[1]
                     /note="nucleotide 2950 in SV40 strain 776"
     variation       replace(334,"t")
                     /citation=[1]
                     /note="nucleotide 3038 in SV40 strain 776"
     CDS             complement(2..391)
                     /partial
                     /note="partial"
                     /product="large T antigen"
                     /codon_start=1
                     /translation="LLLMLIWYRPVAEFAQSIQGRIVEWKERLDKEFSLSVYQKMKFN
                     VAMGTGVLNWLRNSDDDEENADKNEDGGEKNMEDSGHETGIDSQSQGSFQAPQPSQSS
                     QSVHDQPYHICRGFTCFKKPPPPEPET"
BASE COUNT      105 a     94 c     68 g    124 t
ORIGIN      
        1 tttatgtttc aggttcaggg ggaggtggtt ttttaaagca agtaaaacct ctacagatgt
       61 gatatggctg atcatgaaca gactgtgagg actgtgaggg ctgaggggcc tgaaatgagc
      121 cttgggactg tgaatcaatg cctgtttcat gccctgagtc ttccatgttc ttctccccac
      181 catcttcatt tttatcagca ttttcctcat catcatcact gtttcttagc caatttaaaa
      241 ctccagttcc catagccaca ttaaacttca ttttttgata cactgacaaa ctaaactctt
      301 tgtccaatct ctctttccac tccacaattc tgccctgaat actttgagca aactcagcca
      361 caggtctgta ccaaattaac ataagaagca a
//