From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Equine herpesvirus type 1 EUS1 protein (EUS1) gene and IR6 protein
Date: 5 Jan 93 06:46:29 GMT
Distribution: bionet
Checksum: 17762 6

LOCUS       HSEEUSIR     2886 bp ds-DNA             VRL       04-JAN-1993
DEFINITION  Equine herpesvirus type 1 EUS1 protein (EUS1) gene and IR6 protein
            (IR6) gene sequence.
ACCESSION   M80429
KEYWORDS    EUS1 protein; IR6 protein; structural protein.
SOURCE      Equine herpesvirus type 1 (strain Kentucky A) DNA.
  ORGANISM  Equine herpesvirus type 1
            Viridae; ds-DNA enveloped viruses; Herpesviridae;
            Alphaherpesvirinae.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Breeden,C.A., Yalamanchili,R.R., Colle,C.F.III. and
            O'Callaghan,D.J.
  TITLE     Identification and transcriptional mapping of genes encoded at the
            IR/Us junction of equine herpesvirus type 1
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     mRNA            9..2235
                     /gene="EUS1"
     misc_feature    877
                     /note="US/Ir junction"
     TATA_signal     1153..1160
                     /gene="IR6"
     mRNA            1179..2235
                     /gene="IR6"
     polyA_signal    2217..2222
     CDS             249..1157
                     /gene="EUS1"
                     /note="possible structural protein"
                     /product="EUS1 protein"
                     /codon_start=1
                     /translation="MGVVLITVVTVVDRHKALPNSSIDVDGHLWEFLSRQCFVLASEP
                     LGIPIVVRSADLYRFSSSLLTLPKACRPIVRTRGDTAIALDRNGVVYHEDRMGVSIEW
                     LSVLSGYNHLNSSLIINQPYHLWVLGAADLCKPVFDLIPGPKRMVYAEIADEFHKSWQ
                     PPFVCGKLFETIPWTTVEHNHPLKLRAAGGEDTVVGECGFSKHSSNSLVHPPTVNRVI
                     YAVVDPARLREIPAPGRPLPRRPSEGGMRAPRRRSRAPAPARSTAAAATPPRPGDPRA
                     PAARRAGDVTWMERLLWGVFGRTSTR"
     CDS             1326..2144
                     /gene="IR6"
                     /product="IR6 protein"
                     /codon_start=1
                     /translation="MNSDMMTAATAGTEVFRCALARRRNANPPHLVLAPTFAAAAAGG
                     AANSSGEEAPRGERKHLFNPFGCMLGRSYFRRCREEMNEGYFAKVPTGYFPVAPSEVP
                     CRVPVEGVVAGEVLSYSALPLPKIEKRFYKQLNDGTFVRLPFLYPEVYYEGEEEPADE
                     RYYIRADAADASSADPSTLPEEAFAKVPPAIAEGITNWQGPKRIPIPSERYVMKLGFE
                     YQLHVTEDAFQEVNTSFMRLDLQSSPDPHPRGARQPRSRAHVSAENPEDTPVAV"
BASE COUNT      534 a    993 c    768 g    591 t
ORIGIN      
        1 ggatccaccg agggtgtggg aggtggtagc ggaggcgtgg tgtccatcga ttctgacgcg
       61 tcgctcgtag tggaaaacca gtcggttagg tggtcgcatt gtttattttc cattccgatg
      121 ccgtgggcgt gtgcctataa agctataggg cttggcgcac ggcgagtctt tttcacaaca
      181 gagtgtgtat ctagagcagc tctgctgaaa tttatggagt tggttcaacc cacccatttg
      241 ttaataacat gggtgtggtc ttaattacag ttgttacagt tgtcgacaga cacaaagcat
      301 tgccaaacag ttccatcgac gtcgatggac atctgtggga gtttttgagc cgacaatgtt
      361 tcgtattggc atctgaaccg cttggaatac ccatagtggt acgctccgcc gatctctaca
      421 gattttcatc gagtttattg accctaccaa aggcgtgtag gccaatagtc agaaccaggg
      481 gggatacagc tatagctcta gatagaaacg gggtggttta ccacgaagat agaatgggtg
      541 tgagcataga gtggctctct gtactctctg gctataacca tctcaactcc agccttatca
      601 ttaatcagcc ctatcacctc tgggtgctgg gggcagcaga cttgtgcaag ccggtgtttg
      661 acctgatacc cggtcctaaa cgaatggtat acgcagagat agcagatgag tttcataaat
      721 cttggcagcc tcccttcgtg tgtggaaaac tgtttgagac aataccatgg accaccgttg
      781 agcataatca tccgctcaaa ttaagagcgg cgggtggaga agacaccgta gtgggtgagt
      841 gtgggttttc caaacatagc tcgaattcat tagttcatcc acccacagtt aatcgggtga
      901 tttacgcggt ggtcgacccc gcgcgccttc gggaaattcc cgccccgggg cggccgctgc
      961 cgcggcggcc gtcggagggg gggatgcgcg ccccgaggcg gcgctcgcgc gctcccgcgc
     1021 ccgctcggtc cacggccgcc gccgcgacgc cgccccgccc cggggacccg cgggcgcccg
     1081 ccgcccgccg ggcgggagac gtgacgtgga tggaacgcct actctgggga gtgttcggcc
     1141 ggacatccac acgttaaaag gtaggggact ctcgccagta cctcacctcg ctttgtgggt
     1201 tgagcagtgg tttcttgcct tgcaaaagcc tcgcctttac acccgccacc gcctagccct
     1261 gcacaacatc ccctccattt tgaagggaga aaagagagaa gacacctttg aagataacag
     1321 acgtgatgaa ctccgacatg atgacagccg ccaccgccgg caccgaggtc ttccgctgcg
     1381 cgctcgctcg ccgccgcaat gccaacccgc cccacctcgt cttggccccc accttcgccg
     1441 cagccgcggc cgggggggcc gccaactcca gcggcgagga ggcgccgaga ggcgagcgta
     1501 agcacctgtt caacccgttc gggtgcatgc tcgggcgctc ctacttcagg cggtgtcgcg
     1561 aagagatgaa cgaggggtac ttcgccaagg tccccacggg ctacttcccc gtcgcaccca
     1621 gcgaggtgcc gtgccgcgtg ccggtcgagg gggtggtggc cggagaggtg ctcagctact
     1681 ccgccctgcc gctgcccaag atcgagaaga ggttctacaa gcagctgaac gacggaacct
     1741 tcgtccgcct gccgttcctc tacccggagg tgtactacga gggcgaggag gaacccgcgg
     1801 acgagcgcta ttacataagg gccgacgccg ccgatgccag cagcgcggac cccagcactc
     1861 tcccggaaga agcattcgcc aaggttcccc ccgccatcgc cgaggggatc acaaattggc
     1921 aggggccgaa gaggattcct atcccatcgg agcgctacgt gatgaagctg ggattcgagt
     1981 accagttgca cgtcactgaa gacgccttcc aggaagtaaa taccagcttc atgcggctgg
     2041 atctccagag ctcccctgac ccccacccca gaggggccag gcagccccgc agccgcgcgc
     2101 acgtgtctgc agaaaacccc gaagacaccc ccgtggccgt ttgaggccga agttggaacg
     2161 gtgtaaataa tctgtatctc tgaaaagtct gtggtattga gcgtttcagc ttttttaata
     2221 aaaaaacgta aaccatattt tccgtggtgt tggagttttg gtgggtacac tcccctgtag
     2281 ctggcgccct ctagtgccta tcacacacta ctcggtccca ctcatcccag gcggcgtttc
     2341 ccctaccgct ctcccccgct cggcctcccc taccgctctc ccccgctcgg cctcccctac
     2401 cgctctcccc cgctcggcct cccctaccgc tctcccccgc tcggcctccc ctaccgctct
     2461 cccccgctcg gcctccccta ccgctctccc ccgctcggcc tcccctaccg ctctcccccg
     2521 ctcggcctcc cctaccgctc tcccccgctc ggcctcccct accgctctcc cccgctcggc
     2581 ctcccctacc gctctccccc gctcggcctc ccctaccgct ctcccccgct cggcctcccc
     2641 taccgctctc ccccgctcgg cctcccctac cgctctcccc cgctcggcct cccctaccgc
     2701 tctcccccgc tcggcctccc ctaccgctct cccccgctcg gccttcccct ttgttttttt
     2761 gcccagtagc agtctgcgtt ggtttactca caatgactac cacaaccacc tcacccacca
     2821 atccctacca tccccccccc aacggagaga gagaaaaccg gcgaggcctg gtggtctctc
     2881 cccggg
//