From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: E6 orf...L1 orf [pygmy chimpanzee papillomavirus type 1 PCPV-1,
Date: 6 Jan 93 07:08:23 GMT
Distribution: bionet
Checksum: 22372 12

LOCUS       S112610      7902 bp    DNA             UNA       21-DEC-1992
DEFINITION  E6 orf...L1 orf [pygmy chimpanzee papillomavirus type 1 PCPV-1,
            Genomic Complete, 8 genes, 7902 nt]
ACCESSION   S43934 X62844
KEYWORDS    .
SOURCE      pygmy chimpanzee papillomavirus type 1 PCPV-1
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 7902)
  AUTHORS   Van Ranst,M., Fuse,A., Fiten,P., Beuken,E., Pfister,H., Burk,R.D.
            and Opdenakker,G.
  TITLE     Human papillomavirus type 13 and pygmy chimpanzee papillomavirus
            type 1: comparison of the genome organizations.
  JOURNAL   Virology 190, 587-596 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 112610] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 3.
FEATURES             Location/Qualifiers
     CDS             104..556
                     /note="Description: E6 orf"
     CDS             532..828
                     /note="Description: E7 orf"
     CDS             834..2780
                     /note="Description: E1 orf"
     CDS             2722..3855
                     /note="Description: E2 orf"
     CDS             3284..3610
                     /note="Description: E4 orf"
     CDS             3900..4184
                     /note="Description: E5 orf"
     CDS             4368..5759
                     /note="Description: L2 orf"
     CDS             5746..7254
                     /note="Description: L1 orf"
BASE COUNT     2509 a   1418 c   1581 g   2394 t
ORIGIN      
        1 tttaataata atatcctgtt taaaaaatag gagggaccga aaacggtttc aaccgaaatc
       61 ggtgatatat aaaccagccc acaaattaag caagcggggc ataatggaaa aagctaatgc
      121 ctccacgtcc gcaaaaacga tagaccagtt gtgcaaggag tgcaaccttt gtatgcacag
      181 tttgcaaatt ttatgcgtgt tttgcaggaa aaccctgtct actgcagagg tgtatgcatt
      241 tcagtataag gatttaaata ttgtgtggca gggcaatttt ccatttgcgg cctgtgcatg
      301 ttgtttagaa atacaaggaa aagttaatca atacaggcat tttgactttg ctgcatatgc
      361 tgtaacagtc gaagaagaaa taaacaagtc aatttttgat gtgagaattc gatgctattt
      421 gtgccacaaa cctttgtgtg acgtggaaaa attacgacac atcttggaga aagcaagatt
      481 cattaagtta aactgcgagt ggaaagggcg ctgcttccat tgctggacat catgcatgga
      541 aaatatacta ccttaaagga cattgtgtta gacctaagtc ctgaccctgt aggtctacat
      601 tgcaatgagc aattagacag ctcagaagaa gatgaggtgg atgaacaagc cacgcaagcc
      661 acgcaagcca cgttcacaca acattaccaa atagtaacct gttgtggtca gtgtgacagc
      721 aacgtgcgtt tggttgtgga ctgtacagga tcggacattc aacacctaca caagctgctg
      781 ctgggctcat taaatatagt gtgccccttg tgtgctccac aaacctaacc aggatggccg
      841 acaacacagg tacagacaac aagggtacgg ggtgctcagg atggttttta gtagaggcta
      901 tagtagacag gaaaactgga gaagaaatat cagatgatga ggatgaaaca gtggaagata
      961 gtgggttgga tatggtggat tttatagatg acaggtgtat tacacacaat tccttggaag
     1021 cacaggcatt gttaaacgag caggaggcgg atgctcatta tgcagctgtg caagacctaa
     1081 aacgaaagta tttaggtagt ccctatgtta gtccattagg ccatattgaa cagtcagtcg
     1141 agtgtgatat aagtcctcga ttgaacgcca tacaattaag tagaaaacct aaaaaagtaa
     1201 agcggcggct gttccaatca agggaaataa cggacagtgg atatggccat actgaagtgg
     1261 aagtggaagc agcaacgcag gtagaaagac atggcgaacc ggaaaatggc tgtggggggg
     1321 gtggacacgg aagggacaaa gagggggagg gacaggtgca tacggaagtg cacacagaaa
     1381 gcgagataga acaccacacg ggtactacgc gggtactaga actactaaaa tgtaaggata
     1441 taagggctac attgcatggt aagtttaaac aatgctatgg gctatcgttt acagatttaa
     1501 ttagacaatt taaaagtaat aaaacaacat gtgaggactg ggtggtggca gcatttggtg
     1561 tgcatcatag tgtgtctgag gcatttgaaa agttaataca gccattaact atatataggc
     1621 acatacaatg gctaacaaat gaatggggaa tgctattgtt agtattacta agatttaaag
     1681 taaataaaaa tagatgtaca gtagcacgaa cactggcaac attgcttaac attccagaag
     1741 accacatgct aattgaacct ccaaaaatac aaagcagtgt ggcagcatta tactggttta
     1801 gaaccagtct atctaatgcc agtatagtaa caggagaaac acctgaatgg atagcaaggc
     1861 aaacaatagt agaacatggc cttgcagata gtcaatttaa attaactgaa atggtgcaat
     1921 gggcctatga caatgattat tgtgatgaat gcgacatagc atttgaatat gcaaaacgag
     1981 ctgattttga ttctaatgcc aaagcttttt taaatagtaa ttgtcaagca aaatatgtaa
     2041 aggattgtgc aacaatgtgt aagcattata aaaatgcaga aatgaaaaaa atgacaatga
     2101 atcaatggat aaaacataga agcaaaaaaa tagatgaaac aggtaattgg aaaccaatag
     2161 tgcaattttt aaggcaccaa aatatagaat ttatttcgtt tttaagtaaa ttaaagttgt
     2221 ggcttcaggg cacaccaaaa aaaaactgta ttgcaatagt ggggccacca gatacaggca
     2281 aatcaatgtt ttgcatgagt ttaataaaat ttttaggggg aactgtaatt agttatgtaa
     2341 attcaagcag ccatttttgg ctgcaaccgt tatgtaatac taaagtagct ttgctagatg
     2401 atgcaacaca ttcatgctgg ggatatatgg atacatatat gagaaattta ttagatggta
     2461 accctatgag tatagataga aaacataaat cgttagcatt aataaaatgt ccgccattat
     2521 tagtaacatc taatatagat attacaacag aggaaaaata taaatatttg tatagtaggg
     2581 taacagtatt taaatttcca aatccattcc cttttgacag aaatgggaat gcagtatatg
     2641 agttgtgtga tgcaaactgg aaatgttttt ttgcaagatt atcagcaagt ttagatatac
     2701 aggactcaga ggacgaggac gatggagaca ctagccaagc atttagatgc gtgccaggaa
     2761 cagttgttag aactgtatga agaaaatagt aatgaactta caaaacatat acaacattgg
     2821 aaatgtgtac ggcacgaaaa tgtactgtta tacaaagcac gccaaatggg cctaagccat
     2881 attggactac aagttgtgcc accattaaaa gtatcacaaa ctaagggaca tgaggcaatt
     2941 gaaatgcaaa tgacgttaga aacagtgcta aagtcagagt atggtacgga accatggacg
     3001 ttacaagaga caagttttga aatgtggtta acaccaccaa aacattgttt taaaaaacag
     3061 ggacaaactg tggaagtaag atatgactgc aatgcagaaa attcaatgca ttatgtattg
     3121 tggaaataca tttatgtgtg tgaaaatgac agatggcaaa aggtaaaagg aatggtagac
     3181 attaaaggat tatactatat ggttggacag tgtaaaacat attatataga ctttgaaaag
     3241 gaggctaaac aatatagtaa aacattacaa tgggaagtat gttatgacag caaagttata
     3301 tgttctcctg catctgtatc tagtactgtg caagaagtat ccattgctgg gcctacttca
     3361 cactccacaa ccacccttgc acaggccacc tgcgcagtgt catccatcgc cacagaagat
     3421 agtgtgcaag cgccgcccta taaacgactt cgaggaccct cccactgtgc tcgaaaactc
     3481 caaaacacct ctaacattgt gtgtgccacg gaccgtggaa ccttggacag tgaaaacaac
     3541 atcaacaata acaattacaa caacaacaac cagcaacgga acaacagtaa cagtagtggt
     3601 acacctatag tgcaattaca aggtgactca aataacttaa agtgtttcag atatagattg
     3661 catgacaaat ataaacattt atttatgcta gcatcgtcta catggcattg gaccgcctct
     3721 agcaattcaa caaaaaatgc aattgtaaca ttaacatatg tgaatgaaca acaaagacaa
     3781 gattttttaa atactgtaaa aatacctgcc actataaaac atacattagg gtttatgtcg
     3841 tttcaattat tgtaacacca tgtattgtac ataacatgta ttgtgtataa atgctgtaaa
     3901 tggaattaca ggttgtacct gtagatttta ctgcaaaagc aaccagtcaa tcattgttgc
     3961 cactattaat tgctcttact gtatgttttc tcagtattat aatacttata tttgtatctg
     4021 agtttctact atattcatct gttctagtac taaccttact tttatatctg ttgttgtggc
     4081 ttttactaac tccccccttg cagttttttt tactaaccct gtctttgtgc tttttgcctg
     4141 cgttttgtat acatcaatat attttgcaaa ctcagcaaca ataactatac acaatgttaa
     4201 cgtgtacatt taatgatggt gatacatggt tgttattatg gctttttgca tcagtgttag
     4261 ttgcaattgt tgggttactt ttactgcata ttagaactgg aaattgtaat tcacgttttt
     4321 gttatagtaa ataagttttt ttataggttg tgtgtagtgg tttccttatg gcacatagta
     4381 ggcctcgcag acgcaaacgt gcgtctgcta cacagttata tcaaacctgc aaagcttctg
     4441 gtacatgtcc tcctgatatt attgcaaagg tagaacaaaa tactcttgca gataaaatat
     4501 taaagtgggg aagtttagga gtgttttttg gggggcttgg tattggcaca gggtctggta
     4561 ctggcggtag aactggatat gttcctgtac agactgcccc acgccctgcc ataccctttg
     4621 ggcctactgc acgtcctcct attattgttg atacagttgg ccctagtgac tcgtctattg
     4681 tatccttagt agaagattca actattatta attcagcagc gtctgacttt gtgcctccta
     4741 ttcgtgaggg atttgaaata agcacctctg aaactactac tccagccatt ttagatgtat
     4801 ctgtaacaac acacaacact acctctacaa gtatatttaa aaatcctgcc tttgcagaac
     4861 cttctattgt tcagtcacaa ccctcagttg aagcaagtgg acacgttctt acatctacat
     4921 atacatctac tatttcctct cactctgtag aagacattcc attggatact tttattgtat
     4981 cttcatcaga tagtaatcct gcatccagta ctcctgtgcc tacacctgtg gcacgtccac
     5041 gacttggcct ttatagtaaa gcgttgcagc aagtgcaggt tactaatcct gcctttttat
     5101 catcgccaca acgccttata acttttgata accctgctta tgaaggtgaa gatataagtt
     5161 tacagtttca gcacaatact atacataacc ctcctgatga cgcttttatg gatattgtaa
     5221 gattacatag gccggctata acgtctaggc gtggtattgt taggtttagt agaattggtc
     5281 agcgagggtc catgtataca cgcagtggca aacatattgg tggacgggta catttttata
     5341 cagacatttc tcctatatct gcagctgcag aggaacttga aatgcagcct cttgtggctg
     5401 ctgcgcagga tgacagtgga ttatttgatg tttatgtaga ccctacccct ggtcctgtag
     5461 cagtacaaaa tatgtcgtat ccctcctcca catcgtttgt acggtcctct atgtttacca
     5521 ctaagtgggg taatactact gtccctttat cattaccaag taacatattt gcacagccag
     5581 gccctgatat aatatttccc gccgcccctg gtgtaccacc gtataaccct gttataccgt
     5641 ctttacctat aactcctatt tttattagtg ggtctcaatt ttatttacat ccttccttat
     5701 atcttgcacg caaacgtcgt aaacgtgttt ccttgttttt tgcagatgtg gcggcctagt
     5761 gacaacaaac tatatgtgcc tcctcccgcc cctgtatcaa aagtaattac tacggatgca
     5821 tatgttacac gtacaaaaat attttatcat gctagcagtt ctagactact tgcagttggt
     5881 aatccctatt ttcctattag aaagggtaac aaaactattg ttcccaaggt atctggattt
     5941 cagtttagag tatttaaaat agtattacct gaccctaata aatttgcttt gcctgacaca
     6001 tctatatttg attctactag tcaacgtttg gtgtgggcct gtataggttt agaggtaggt
     6061 aggggtcagc cattaggtgt tggtattagt ggacatcctt tgttaaacaa atttgatgat
     6121 gtagaaaatt ctgctagtta tgctgtaaac cctggccagg ataatagggt taatgtagca
     6181 atggactata aacaaacaca gttatgtttg gtaggttgtg cacctccttt aggggaacat
     6241 tggggtaaag gcacacaatg ttcaggtgta agtgtacaag atggcgattg tcctccattg
     6301 gaattagtta ctagtgtaat tcaggatggt gatatggttg atacaggctt tggagccatg
     6361 gattttgcac aattacaatc taataaatca gatgtacctt tagatatatg cacagctact
     6421 tgcaaatatc ctgactattt acaaatggct gcagatcctt atggtgacag attatttttt
     6481 tctttacgta aagaacaaat gtttgcaaga cattttttta atagggcagg gactgttggt
     6541 gagcaaatac cagaagactt attggttaaa gggactacct cacgagctac tgtttctagt
     6601 actatttatt ttaatactcc cagtggctct cttgtgtctt ctgaagctca gttgtttaat
     6661 aaaccttatt ggttacataa ggctcaggga cacaataatg gcatatgttg gggcaatact
     6721 ttgtttgtta ctgttgtaga tactacacga agtacaaaca tgactgtttg tgcttccaca
     6781 acatcgtcgc cttctgccac atacacagct tcagaatata aacaatacat gcgacatgtg
     6841 gaagaatttg atttgcaatt tatttttcaa ttatgcagta ttaaattaac tgctgaagta
     6901 atggcatata ttcatactat gaatcctaca gttttagaag aatggaactt tggattatct
     6961 ccccctccca atggaacatt agaagacaca tatagatatg ttcagtctca ggctataaca
     7021 tgtcaaaaac ctactcctga taaggagaaa caggatcctt atgcaggtct cagtttttgg
     7081 gaagttaatc ttaaagaaaa gttttctagt gagctagatc aatatccgct tggtagaaag
     7141 tttttattac aaacaggcgt tcaaactaca tcctttgctc gtgcaggaac aaaacgtgct
     7201 gcaagtacat cttcatctac acctactaca cgtaaacggg ttaaacggaa atagtttgtt
     7261 attttgtgtg tatgtttgtt atgtatgttt gttgtttata tgttgtatag tatatgtgta
     7321 atgttatatg tatgttgttt ttatgtatta aagaatgtat gtgtgtgttt gtgtgtaata
     7381 aacttaatct gtggtgtcct gttccaccct atgactaact attttgttgt ttatgttatg
     7441 ttgtatatta tatagtattt atataactat ttaaaaacat atatattaaa ttatactcca
     7501 tattgagtac gaccgaattc ggttgtctac ttttacatcc tgtaaccaat ttgttgcagc
     7561 acgttactta tataatctta tctactgtct gccaaaaata atttatccta ccacctacac
     7621 acctggcgtt accagggtgc ggtttttata tttacaaaat gttattaatc tctgtaacag
     7681 tcattccact ttctaacaat cgttttgctt ttctagtaac tttttcatac tttgttgcca
     7741 atgcctaaaa tcctttttgg ctaccagcac tacatttttg taaacttact gttcatttta
     7801 caaaatgagt aaccgtgttt gttttacaaa ctgagtaacc tacggtcaca cacctgcaca
     7861 ccggtatcgg ttaaaacaca ccctgtctaa tcctttatta ta
//