HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Coprinus cinereus tryptophan synthetase (TRP1) gene, exon 5.
Date: 8 Apr 92 10:00:33 GMT
Article-I.D.: genbank.Apr.8.03.00.33.1992.16073
Distribution: bionet
Checksum: 47514     3

LOCUS       CCITRP05      644 bp ds-DNA             PLN       08-APR-1992
DEFINITION  Coprinus cinereus tryptophan synthetase (TRP1) gene, exon 5.
ACCESSION   M91656 M25225
KEYWORDS    tryptophan synthetase.
SEGMENT     5 of 10
SOURCE      C.cinereus (strain H9 X 12890/3; dikaryon stage) DNA, clone
            pCc1003.
  ORGANISM  Coprinus cinereus
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Hymenomycetes;
            Agaricales; Coprinaceae.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Skrzynia,C., Binninger,D.M., Alspaugh,J.A.II. and Pukkila,P.J.
  TITLE     Molecular characterization of TRP1, a gene coding for tryptophan
            synthetase in the basidiomycete Coprinus cinereus
  JOURNAL   Gene 81, 73-82 (1989)
  STANDARD  simple staff_review
COMMENT     Draft entry and computer-readable sequence for [Gene, 81 (1989)
            73-82] kindly submitted
            by P.J.Pukkila, 14-JUN-1989.
FEATURES             Location/Qualifiers
     intron          order(M91655:121..162,1..23)
                     /number=4
                     /gene="TRP1"
     exon            24..607
                     /number=5
                     /gene="TRP1"
BASE COUNT      142 a    175 c    169 g    158 t
ORIGIN      Unreported.
        1 ttaagtacac catcctatct tagatgggta ctacgggttc ctcagccaat gtcgctgtca
       61 acgaagaact gcctaccatt ctttctcgca tccgggaata tacccatgtc ccattggccg
      121 tcgaatttgg ggtcgctacc cgggaccagt tcaactacgt cgccgatgct ggagcagacg
      181 gtgttgttgt tattggcagt cgaattgtta atgccatcaa ggccgccggc gagggacaag
      241 ttccgcaatt cgtggagaac tattgccgag aggtatctgg aaagggcgag ccatcccgcg
      301 tccgttctcc aggagccgct caacgcacgc catcccagtt gactcccaat gccgaaactg
      361 caaagggggt ggagaacatt cttcccgctc gctttggcca atttggtggt caatacgtac
      421 cggagtcttt ggtcgatgca cttgctgagc tggaggaggc tcacaagtca gccatagaag
      481 accccgcctt ctgggaagaa gtccgaagtt tgtacaccta cagcaaccgg ccctctaacc
      541 tttacctcgc tgagaatctc accaaggaag ctggtggtgc caacatttgg ttgaagcgag
      601 aagacttgtt cgtttattca gctcgtctgt cgtctctgtg gttc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human leukocyte common antigen T200 (CD45, LCA) gene, exon 15.
Date: 8 Apr 92 10:01:05 GMT
Distribution: bionet
Checksum: 07599     2

LOCUS       HUMLCA17      141 bp ds-DNA             PRI       08-APR-1992
DEFINITION  Human leukocyte common antigen T200 (CD45, LCA) gene, exon 15.
ACCESSION   M23474 M23509
KEYWORDS    T200 glycoprotein; alternative splicing; cell surface antigen;
            cell surface glycoprotein; phosphoprotein.
SEGMENT     17 of 35
SOURCE      Homo sapiens placenta DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Ralph,S.J., Thomas,M.L., Morton,C.C. and Trowbridge,I.S.
  TITLE     Structural variants of human T200 glycoprotein (leukocyte-common
            antigen)
  JOURNAL   EMBO J. 6, 1251-1257 (1987)
  STANDARD  full staff_review
REFERENCE   2  (bases 1 to 141)
  AUTHORS   Hall,L.R., Streuli,M., Schlossman,S.F. and Saito,H.
  TITLE     Complete exon-intron organization of the human leukocyte common
            antigen (CD45) gene
  JOURNAL   J. Immunol. 141, 2781-2787 (1988)
  STANDARD  full staff_entry
COMMENT
FEATURES             Location/Qualifiers
     intron          order(M23473:250..289,1..40)
                     /number=14
                     /gene="PTPRC"
     exon            41..101
                     /number=15
                     /gene="PTPRC"
BASE COUNT       44 a     22 c     17 g     58 t
ORIGIN
        1 tagcaaacta attattttat tttttgttac tgaaattcag gcctattttc acaatggaga
       61 ctatcctgga gaacccttta ttttacatca ttcaacatct tgtaagttat cactgggcta
      121 tttattatat atattaagat a
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human leukocyte common antigen T200 (CD45, LCA) gene, exon 24.
Date: 8 Apr 92 10:01:26 GMT
Distribution: bionet
Checksum: 10078     2

LOCUS       HUMLCA26      238 bp ds-DNA             PRI       08-APR-1992
DEFINITION  Human leukocyte common antigen T200 (CD45, LCA) gene, exon 24.
ACCESSION   M23483 M23518
KEYWORDS    T200 glycoprotein; alternative splicing; cell surface antigen;
            cell surface glycoprotein; phosphoprotein.
SEGMENT     26 of 35
SOURCE      Homo sapiens placenta DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Ralph,S.J., Thomas,M.L., Morton,C.C. and Trowbridge,I.S.
  TITLE     Structural variants of human T200 glycoprotein (leukocyte-common
            antigen)
  JOURNAL   EMBO J. 6, 1251-1257 (1987)
  STANDARD  full staff_review
REFERENCE   2  (bases 1 to 238)
  AUTHORS   Hall,L.R., Streuli,M., Schlossman,S.F. and Saito,H.
  TITLE     Complete exon-intron organization of the human leukocyte common
            antigen (CD45) gene
  JOURNAL   J. Immunol. 141, 2781-2787 (1988)
  STANDARD  full staff_entry
COMMENT
FEATURES             Location/Qualifiers
     intron          order(M23482:167..206,1..40)
                     /number=23
                     /gene="PTPRC"
     exon            41..198
                     /number=24
                     /gene="PTPRC"
BASE COUNT       95 a     49 c     48 g     46 t
ORIGIN
        1 taaaaaaatc atctcaaaga aaatattatc tcttgactag aaaaaagaaa aagcaactgg
       61 aagagaggtg actcacattc agttcaccag ctggccagac cacggggtgc ctgaggatcc
      121 tcacttgctc ctcaaactga gaaggagagt gaatgccttc agcaatttct tcagtggtcc
      181 cattgtggtg cactgcaggt aggaaaaacg aacaaaaaaa aaaaacaaca acaaaaaa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: K.pneumonia plasmid pBWH1 aadB gene
Date: 10 Apr 92 10:07:39 GMT
Distribution: bionet
Checksum: 40520     3

LOCUS       KPNAADBG      981 bp ds-DNA             BCT       10-APR-1992
DEFINITION  K.pneumonia plasmid pBWH1 aadB gene
ACCESSION   X64368
KEYWORDS    aadB gene.
SOURCE      Klebsiella pneumoniae DNA.
  ORGANISM  Klebsiella pneumoniae
            Prokaryota; Bacteria; Gram-negative facultatively anaerobic rods;
            Enterobacteriaceae.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Zieg,J., Jiang,H., McCabe,F. and O'Brien,T.D.
  TITLE     Molecular characterization and comparison of the regions encoding
            gentamicin resistance (aadB) in pBW1 and pLST1000 and their
            relationship to Tn21 family of transposons and elements
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     From EMBL    entry KPAADBG;  dated 30-MAR-1992.
FEATURES             Location/Qualifiers
     misc_signal     318..332
                     /note="5' recombinational hot spot"
     CDS             338..871
                     /function="gentamicinresistance"
                     /gene="aadB structural gene"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
     misc_signal     866..925
                     /note="3' recombinational hot spot"
BASE COUNT      221 a    243 c    305 g    212 t
ORIGIN
        1 atgcctcgac ttcgctgctg cccaaggttg ccgggtgacg cacaccgtgg aaacggatga
       61 aggcacgaac ccagtggaca taagcctgtt cggttcgtaa gctgtaatgc aagtagcgta
      121 tgcgctcacg caactggtcc agaaccttga ccgaacgcag cggtggtaac ggcgcagtgg
      181 cggttttcat ggcttgttat gactgttttt ttggggtaca gtctatgcct cgggcatcca
      241 agcagcaagc gcgttacgcc gtgggtcgat gtttgatgtt atggagcagc aacgatgtta
      301 cgcagcaggc agtcgcccta aaacaaagtt aggccgcatg gacacaacgc aggtcacatt
      361 gatacacaaa attctagctg cggcagatga gcgaaatctg ccgctctgga tcggtggggg
      421 ctgggcgatc gatgcacggc tagggcgtgt aacacgcaag cacgatgata ttgatctgac
      481 gtttcccggc gagaggcgcg gcgagctcga ggcaatagtt gaaatgctcg gcgggcgcgt
      541 catggaggag ttggactatg gattcttagc ggagatcggg gatgagttac ttgactgcga
      601 acctgcttgg tgggcagacg aagcgtatga aatcgcggag gctccgcagg gctcgtgccc
      661 agaggcggct gagggcgtca tcgccgggcg gccagtccgt tgtaacagct gggaggcgat
      721 catctgggat tacttttact atgccgatga agtaccacca gtggactggc ctacaaagca
      781 catagagtcc tacaggctcg catgcacctc actcggggcg gaaaaggttg aggtcttgcg
      841 tgccgctttc aggtcgcgat atgcggccta acaattcgtc caagccgacg ccgcttcgcg
      901 gcgcggctta actcaggtgt tagatgcact aagcacataa ttgctcacag ccaaactatc
      961 aggtcaagtc tgcttttatt a
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPB5, V3 region.
Date: 7 Apr 92 10:02:30 GMT
Distribution: bionet
Checksum: 18859     3

LOCUS       HIVFLPB5      340 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPB5, V3 region.
ACCESSION   M90866
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone A05 of DNA
            ID 5592.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 13 clone sequences over the V3
            region obtained by the CDC from patient "B" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>340
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEVVIRSANFTDNAKIIIVQLNASVEINCTRPNNNTRKGIH
                     IGPGRAFYATGEIIGDIRQAHCNISGAKWNNTLEQVKTKLKEQFNKTIIFNHSSGGDP
                     EIVMHSFNCGG"
BASE COUNT      146 a     48 c     68 g     78 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaggtagt aattagatct gccaatttca cagacaatgc taaaatcata
       61 atagtacagc tgaatgcatc tgtagaaatt aattgtacaa gacccaacaa caatacaaga
      121 aaaggtatac atataggacc agggagggca ttttatgcaa caggagaaat aataggagat
      181 ataagacaag cacattgtaa cattagtgga gcaaaatgga ataatacttt agaacaggta
      241 aagacaaaat taaaagaaca atttaataaa acaataatct ttaatcactc ctcaggaggg
      301 gacccagaaa ttgtaatgca cagttttaat tgtggagggg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Spirochaeta sp. 16S ribosomal RNA, complete sequence.
Date: 10 Apr 92 10:13:03 GMT
Distribution: bionet
Checksum: 64119     3

LOCUS       SPADB        1517 bp ss-rRNA            RNA       10-APR-1992
DEFINITION  Spirochaeta sp. 16S ribosomal RNA, complete sequence.
ACCESSION   M71240
KEYWORDS    16S ribosomal RNA.
SOURCE      Spirochaeta sp. rRNA.
  ORGANISM  Spirochaeta sp.
            Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes;
            Spirochaetales; Spirochaetaceae.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Paster,B.J., Dewhirst,F.E., Weisburg,W.G., Tordoff,L.A.,
            Fraser,G.J., Hespell,R.B., Stanton,T.B., Zablen,L.B., Mandelco,L.
            and Woese,C.R.
  TITLE     Phylogenetic analysis of the spirochetes
  JOURNAL   J. Bacteriol. 173, 6101-6109 (1991)
  STANDARD  simple staff_entry
BASE COUNT      374 a    348 c    497 g    284 t     14 others
ORIGIN
        1 ctttcgggct tcgggcccgt aaganatata tcatggagag tttgatcctg gctcagaacg
       61 aacgctggcg gcgcgtctta annatgcaag tcgagcggta agctgtagca atacagccta
      121 gagcggcgga ctggtgagta acacgtgggt gacctaccct taggatgggg atagccacta
      181 gaaatagtgg gtaataccga atgtggttac cgggctgtgg cctngtaaag aaaggagctt
      241 tgctccgcct gaggatgggc ccncgtccca ttagctcgtt ggtgaggtaa cggcccacca
      301 aggcgatgat gggtagccgg cctgagaggg tgaacggcca cactgggact gagatacggc
      361 ccagactcct acgggaggca gcagctaaga atattccgca atggacgaaa gtctgacgga
      421 gcgacgccgc gtggatgatg aaggccnaaa ggttgtaaaa tccttttgtc gatgaagaat
      481 aagcatggga gggaatgccc gtgtgatgac gttagtcggc gaataagccc cggctaatta
      541 cgtgccagca gccgcggtna cacgtaaggg gcnagcgttg ttcggaatta ttgggcgtaa
      601 agggcgcgta ggcggtcctg taagcccngc gtgaaaacct ggagctcaac tccgggcctg
      661 cgctgggaac tgcgggacta gagtcatgga agggaagttg gaattccagg tgtaggggtg
      721 aaatctgtag atatctggaa gaacaccggt ggcgaaggcg aacttctggc caatgactga
      781 cgctgaggcg cgaaagtgcg gggagcaaac aggattagat accctggtag tccgcaccat
      841 aaacgatgta cactaggcgt tgggtcgagt gactcagtgc cgaagctaac gtgataagtg
      901 taccgcctgg ggagtatgcc cgcaagggtg aaactcaaag gaattgacgg gggcccgcac
      961 aagcggtgga gcatgtggtt taattcgatn ntacgcgagg aaccttacct gggtttgaca
     1021 tacgggggaa ggcggtagag atatcgcccg tcgcaagacg ccgccgtaca ggtgctgcat
     1081 ggctgtcgtc agctcgtgcc gtgaggtgtt gggttaagtc ccgcaacgag cgcaacccct
     1141 actgccagtt actagcaggt aaagctgagg actctggcgg aactgccggt gacaaaccgg
     1201 aggaaggtgg ggatgacgtn nagtcatcat ggcccttatg tccagggcta cacacgtgct
     1261 acaatggtcg gtacaaagcg aagcaaagcc gcgaggtaag agcaaagcgc aaaaagccga
     1321 ycgtagttcg gattgaagtc tgaaacccga cttcatgaag gtggaatcgc tagtaatcgc
     1381 gcatcagcac ggcgcggtga atacgttccc gggccttgta cacaccgccc gtcacaccat
     1441 ccgagttgga ggtacccgaa gccggtagtc taacccgcaa ggggggacgc tgtcgaaggt
     1501 acgtctagtg aggaggg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human mast cell carboxypeptidase A (MC-CPA) gene, exon 3.
Date: 8 Apr 92 10:01:36 GMT
Distribution: bionet
Checksum: 09013     3

LOCUS       HUMMCCPA02    912 bp ds-DNA             PRI       08-APR-1992
DEFINITION  Human mast cell carboxypeptidase A (MC-CPA) gene, exon 3.
ACCESSION   M73717
KEYWORDS    carboxypeptidase; metalloexopeptidase; secretory granules.
SEGMENT     2 of 5
SOURCE      Homo sapiens (library: lambda-gHMCCPA-1) DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Reynolds,D.S., Gurley,D.S. and Austen,K.F.
  TITLE     Cloning and characterization of the novel gene for mast cell
            carboxypeptidase A
  JOURNAL   J. Clin. Invest. 89(1), 273-282 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     intron          order(M73716:2057..2760,1..351)
                     /number=2
                     /gene="MC-CPA"
     exon            352..476
                     /number=3
                     /gene="MC-CPA"
BASE COUNT      299 a    190 c    162 g    261 t
ORIGIN
        1 ttagaggcag attctgtggc tagatgaatt gtgatcccat tcaatcccaa aattgtggaa
       61 gaaaaaaatt aaccaaaaga tctgcccatc ctttttaact tgatagacct gaagtcctta
      121 aaaaaaaaaa aagtgatcag gcactaggaa ggtttctttc ctcctcccta atattcaaca
      181 gttcttaaat atatttgcaa aaatcccata aacttattaa aagaagggtc tgtatcttag
      241 ttatgctgag ccccaaattc ctttcatggt gtatgagaca tgatcatttc ttaatcaata
      301 agtgttgggt aagcaaataa actctgacta acattgagct tatctctgca gcttgacttc
      361 tggtatccag gtgccaccca ccacgtagct gctaatatga tggtggattt ccgagttagt
      421 gagaaggaat cccaagccat ccagtctgcc ttggatcaaa ataaaatgca ctatgagtaa
      481 gtccttggca aatattgaaa tttgttggat attcaaagtt ttgggagcct tgaagtagag
      541 gaaagtatta caatggacct atttttaatt gggcccccca gaacgaaagc tctttctgta
      601 agatacagat cacagttact tccaaacaca ttatcgaagc ctgtttacag aggtgataga
      661 atcaaacttg gcagttcaac atctacctta catttgctct tagctataag aataacaatt
      721 acctatatct accatctcca aaaccagccc ctcataagca cagagcccac atgagcaggc
      781 atgaatggtt tagccacatg tcatcactac tgacaggtaa tcggcccaga tctcatgagc
      841 tactggcgct ggcctccttt tatatatttg aattttcctg atacataaaa ggagaccaaa
      901 aaaaaaagtc at
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: T.cruzi mRNA for acidic ribosomal P2-type protein
Date: 10 Apr 92 10:14:07 GMT
Distribution: bionet
Checksum: 09974     3

LOCUS       TRBP2BMRNA    597 bp ss-mRNA            INV       10-APR-1992
DEFINITION  T.cruzi mRNA for acidic ribosomal P2-type protein
ACCESSION   X65065
KEYWORDS    ribosomal P protein; ribosomal P2 protein.
SOURCE      Trypanosoma cruzi RNA.
  ORGANISM  Trypanosoma cruzi
            Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
            Kinetoplastida; Trypanosomatina; Trypanosomatidae.
REFERENCE   1  (sites)
  AUTHORS   Vazquez,M., Schijman,A., Panebra,A. and Levin,M.
  TITLE     Nucleotide sequence of a cDNA encoding another acidic ribosomal
            P2-type protein from Trypanosoma cruzi
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Vazquez,M.P.
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=RA; *source: stage=trypomastigote; *source: clone=
            RPG13i, RPG13e;
            From EMBL    entry TCP2BMRNA;  dated 30-MAR-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..35
                     /note="miniexon"
     CDS             64..402
                     /product="ribosomal P2-type protein"
                     /translation="MSMKYLAAYALASLNKPTPGAADVEAICKACGIEVESDALSFVM
                     ESIAGRSVATLVAEGAAKMSAVAVSAAPAAGDAAAPAAAAGGAAAPAAADAKKEEEEE
                     DDDMGFGLFD"
     polyA_site      566
BASE COUNT      144 a    151 c    165 g    137 t
ORIGIN
        1 aacgctatta ttgatacagt ttctgtacta tattgctcga agtctcttta cgccacctca
       61 gccatgtcca tgaagtacct cgccgcatac gcccttgcgt cgctgaacaa accgacacca
      121 ggcgccgccg atgtggaggc catctgcaag gcctgcggta tcgaagttga gagcgatgca
      181 ctctcgtttg tcatggaatc cattgccggc cggagcgttg ccactctcgt ggcggagggc
      241 gcggcgaaga tgagcgctgt tgccgtctcc gctgctcctg ctgccggtga tgcggccgct
      301 cctgctgctg ctgctggcgg tgccgccgcc cctgccgccg ctgacgccaa gaaggaagaa
      361 gaggaggagg acgatgacat gggctttggt ctgtttgact aagtgcagcg gcatgcaacg
      421 tgccggagca gaaagggact gcgtcactgc gcacttgaac aaggaaaaac atactggccg
      481 ccgtatttgg ggtgtgcatg actggaaggc atcttgcagt tcgacaactt ttttttgatt
      541 ctgttttttc tatttatgaa tgaattaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC02.DA06, V3
Date: 7 Apr 92 10:05:02 GMT
Distribution: bionet
Checksum: 22884     3

LOCUS       HIVFLQ66      330 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC02.DA06, V3
            region.
ACCESSION   M90918
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone DA06 of DNA
            ID 5242.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from this Florida control sample.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>330
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEEEIVIRSANFTDNTKIIIVQLNESVKINCTRPSNNTRKSIP
                     IGPGRAFYATGDVIGDIRQAHCNISGAKWNNTLKRIVIKLREHFGHKTIVFDQPSGGA
                     PEIVKHSF"
BASE COUNT      141 a     52 c     61 g     76 t
ORIGIN      near the C2-V3 boundary
        1 ctagcagaag aagaaatagt aattagatct gccaatttca cagacaatac taaaatcata
       61 atagtacagc tgaatgaatc tgtaaaaatt aattgtacaa gacccagcaa caatacaaga
      121 aaaagtatac ctataggacc aggcagagca ttttatgcaa caggagatgt aataggagat
      181 ataagacaag cacattgtaa cattagtgga gcaaaatgga ataacacttt aaaacggata
      241 gttataaaat taagagaaca ctttgggcat aaaacaatag tctttgatca accctcagga
      301 ggggccccag aaattgtaaa gcacagtttt
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC06D, V3 region.
Date: 7 Apr 92 10:04:02 GMT
Distribution: bionet
Checksum: 45572     2

LOCUS       HIVFLQ12D     249 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC06D, V3 region.
ACCESSION   M90935
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct sequencing of
            proviral DNA, Florida control sample DNA ID 5294.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            A direct PCR amplification product is also available over this
            region for this patient, accession M00000.
FEATURES             Location/Qualifiers
     CDS             <1..>249
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="VVIRSENFTNNAKTIIVQLKESVVINCTRPNNNTRRSIHIGPGR
                     AWYTTGEITGDIRQAHCTINRAKWNETLKQIVIKLREQF"
BASE COUNT      118 a     32 c     43 g     56 t
ORIGIN      near the C2-V3 boundary
        1 gtagtaatta gatctgaaaa tttcacaaac aatgctaaaa ccataatagt acagctgaaa
       61 gaatctgtag taattaattg tacaagaccc aacaataata caagaagaag tatacatata
      121 ggaccaggga gagcatggta tacaacagga gaaataacag gagatataag acaagcacat
      181 tgtaccatta atagagcaaa atggaatgaa actttaaaac agatagttat aaaattaaga
      241 gaacaattt
//