HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rabbit (clone AliM14-IgM) IG rearranged H-chain V-D-J regions
Date: 15 Sep 92 10:05:48 GMT
Distribution: bionet
Checksum: 22065     2

LOCUS       RABIGHV32A    315 bp ss-mRNA            MAM       15-SEP-1992
DEFINITION  Rabbit (clone AliM14-IgM) IG rearranged H-chain V-D-J regions
            (IGHVDJ) mRNA, partial cds.
ACCESSION   M99560
KEYWORDS    diversity region; immunoglobulin heavy chain; joining region;
            processed gene; variable region.
SOURCE      Oryctolagus cuniculus (individual_isolate 12501, strain Alicia/Bii)
            (library: PCR-generated using C-mu oligo) M adult spleen cDNA to
            mRNA.
  ORGANISM  Oryctolagus cuniculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Lagomorpha; Leporidae.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Chen,H.-T., Alexander,C.B., Young-Cooper,G.O. and Mage,R.G.
  TITLE     VH gene expression and regulation in the mutant ALICIA rabbit:
            Rescue of VHa2 allotype expression
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <1..>315
                     /product="immunoglobulin heavy chain VDJ region"
                     /gene="IGHVDJ"
                     /codon_start=1
                     /translation="LFKPTDTLTLTCTVAGFSLSTYDMSWVRQAPGNGLEWIGIVGRY
                     GDTYYASWARSRSTITRNTNENTVTLKMTSLTAADTATYFCARGYWSLDIWGPGTLVT
                     VSS"
BASE COUNT       75 a     93 c     86 g     61 t
ORIGIN
        1 ctcttcaagc caacggatac cctgacactc acctgcacag tcgctggatt ctccctcagt
       61 acctacgaca tgagctgggt ccgccaggct ccagggaacg ggctggaatg gatcggaatt
      121 gttggaaggt atggcgacac atactacgcg agttgggcga gaagccgttc caccatcacc
      181 agaaacacca acgagaacac ggtgactctg aaaatgacca gtctgacggc cgcggacacg
      241 gccacctatt tctgtgcgag aggttattgg agtttggaca tctggggccc aggcaccctg
      301 gtcaccgtct cctca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C. elegans cDNA clone cm5a7; 5' end, single read
Date: 10 Sep 92 10:26:31 GMT
Distribution: bionet
Checksum: 47807     2

LOCUS       CEL5A7        344 bp ds-DNA             INV       10-SEP-1992
DEFINITION  C. elegans cDNA clone cm5a7; 5' end, single read
ACCESSION   Z14765
KEYWORDS    expressed sequence tag.
SOURCE      Caenorhabditis elegans DNA.
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditida;
            Rhabditina; Rhabditoidea; Rhabditidae.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Waterston,R., Martin,C., Craxton,M., Huynh,C., Coulson,A.,
            Hillier,L., Durbin,R.K., Green,P., Shownkeen,R., Halloran,N.,
            Hawkins,T., Wilson,R., Berks,M., Du,Z., Thomas,K., Thierry-Mieg,J.
            and Sulston,J.
  TITLE     A survey of expressed genes in Caenorhabditis elegans
  JOURNAL   Nature Genet. 1, 114-123 (1992)
  STANDARD  full automatic
COMMENT     *source: stage=varied; *source: tissue=whole animal; *source:
            clone_library=Chris Martin sorted cDNA library; *source: sex=
            Hermaphrodite;
            Submitted (16-AUG-1992) to the EMBL Data Library by: Nematode
            Sequencing Project, MRC Laboratory of Molecular Biology, Cambridge
            CB2 2QH, England and Department of Genetics, Washington University,
            St. Louis, MO 63110, USA. E-mail: jes@mrc-lmba.cambridge.ac.uk or
            rw@nematode.wustl.edu
            From EMBL    entry CE5A7;  dated 20-AUG-1992.
BASE COUNT       78 a     69 c     82 g    107 t      8 others
ORIGIN
        1 aggacatcga tttgacattg gatggttctt gacatcgaca tcaccacata tgtgggctgg
       61 tcttggtatc ggattctcgc tttcgctttc cgtcttggga gccggatggg gaatcttcac
      121 aacgggatct tcaattctcg gaggaggagt taaggcacca agaattagaa caaagaatct
      181 tgtttctatt attttctgcg aanntgttgc tattttcngt attatcatgg ctttcgtntt
      241 cgtcggaaag ctcgctgaat tccgncgtga agatcttcct gatactgaag acggaatggc
      301 aatccttgct cgnaacctcg nttcaggata catgatcttt ngag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C. elegans cDNA clone cm17e6; 5' end, single read
Date: 10 Sep 92 10:22:05 GMT
Distribution: bionet
Checksum: 37359     2

LOCUS       CEL17E6       330 bp ds-DNA             INV       10-SEP-1992
DEFINITION  C. elegans cDNA clone cm17e6; 5' end, single read
ACCESSION   Z14611
KEYWORDS    expressed sequence tag.
SOURCE      Caenorhabditis elegans DNA.
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditida;
            Rhabditina; Rhabditoidea; Rhabditidae.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Waterston,R., Martin,C., Craxton,M., Huynh,C., Coulson,A.,
            Hillier,L., Durbin,R.K., Green,P., Shownkeen,R., Halloran,N.,
            Hawkins,T., Wilson,R., Berks,M., Du,Z., Thomas,K., Thierry-Mieg,J.
            and Sulston,J.
  TITLE     A survey of expressed genes in Caenorhabditis elegans
  JOURNAL   Nature Genet. 1, 114-123 (1992)
  STANDARD  full automatic
COMMENT     *source: stage=varied; *source: tissue=whole animal; *source:
            clone_library=Chris Martin sorted cDNA library; *source: sex=
            Hermaphrodite;
            Submitted (16-AUG-1992) to the EMBL Data Library by: Nematode
            Sequencing Project, MRC Laboratory of Molecular Biology, Cambridge
            CB2 2QH, England and Department of Genetics, Washington University,
            St. Louis, MO 63110, USA. E-mail: jes@mrc-lmba.cambridge.ac.uk or
            rw@nematode.wustl.edu
            From EMBL    entry CE17E6;  dated 20-AUG-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..7
                     /note="trans-spliced leader SL1"
BASE COUNT      110 a     62 c     64 g     85 t      9 others
ORIGIN
        1 gtttganttc agaaaaatga cagcaatata cgatatgana cgtcgtgtca ncatgcatga
       61 ngtgaactnt gaaccagact atgatgacat ggacnctgac atgaaagact ttttcactga
      121 tagtaatcaa caatactaca ctgaacggaa ccaatatacg atcgaaaaac taccagacaa
      181 agtcttacga gacattttcc agtatttgtc gccaaaacag attaaccaag taggacttgt
      241 ttgcaaaana tggagggtca cgtctcaaaa tccactgctt tggaagtttn tttcgttcag
      301 gccaaattat ggtgganttc aggtgatccg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Lithobius forficatus zinc finger protein (Kruppel domain region)
Date: 11 Sep 92 10:04:57 GMT
Distribution: bionet
Checksum: 24166     2

LOCUS       LIUZFB        138 bp ds-DNA             INV       11-SEP-1992
DEFINITION  Lithobius forficatus zinc finger protein (Kruppel domain region)
            gene, partial cds.
ACCESSION   L01598
KEYWORDS    zinc finger protein.
SOURCE      Lithobius forficatus DNA.
  ORGANISM  Lithobius forficatus
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Chilopoda;
            Anamorpha; Lithobiida; Lithobiidea; Lithobioidea; Lithobiidae.
REFERENCE   1  (bases 1 to 138)
  AUTHORS   Sommer,R.J., Retzlaff,M., Goerlich,K., Sander,K. and Tautz,D.
  TITLE     Evolutionary conservation pattern of zinc-finger domains of
            Drosophila segmentation genes
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <1..>138
                     /note="Kruppel domain"
                     /product="zinc finger protein"
                     /codon_start=1
                     /translation="MRLHTGEKPYHCTHCERQFVQVANLRRHLRVHTGERPYACELCT
                     SK"
BASE COUNT       33 a     42 c     37 g     26 t
ORIGIN
        1 atgcgactac atacagggga aaagccgtat cactgcacgc attgcgagcg ccagtttgtg
       61 caagttgcca acttgcggag acaccttcga gtccacactg gggaacggcc ctacgcctgt
      121 gagctctgca cctccaag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C. elegans cDNA clone cm11e5; 5' end, single read
Date: 10 Sep 92 10:15:19 GMT
Distribution: bionet
Checksum: 25761     2

LOCUS       CEL11E5       292 bp ds-DNA             INV       10-SEP-1992
DEFINITION  C. elegans cDNA clone cm11e5; 5' end, single read
ACCESSION   Z14371
KEYWORDS    expressed sequence tag.
SOURCE      Caenorhabditis elegans DNA.
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditida;
            Rhabditina; Rhabditoidea; Rhabditidae.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   Waterston,R., Martin,C., Craxton,M., Huynh,C., Coulson,A.,
            Hillier,L., Durbin,R.K., Green,P., Shownkeen,R., Halloran,N.,
            Hawkins,T., Wilson,R., Berks,M., Du,Z., Thomas,K., Thierry-Mieg,J.
            and Sulston,J.
  TITLE     A survey of expressed genes in Caenorhabditis elegans
  JOURNAL   Nature Genet. 1, 114-123 (1992)
  STANDARD  full automatic
COMMENT     *source: stage=varied; *source: tissue=whole animal; *source:
            clone_library=Chris Martin sorted cDNA library; *source: sex=
            Hermaphrodite;
            Submitted (16-AUG-1992) to the EMBL Data Library by: Nematode
            Sequencing Project, MRC Laboratory of Molecular Biology, Cambridge
            CB2 2QH, England and Department of Genetics, Washington University,
            St. Louis, MO 63110, USA. E-mail: jes@mrc-lmba.cambridge.ac.uk or
            rw@nematode.wustl.edu
            From EMBL    entry CE11E5;  dated 20-AUG-1992.
BASE COUNT       90 a     56 c     75 g     63 t      8 others
ORIGIN
        1 gagaaaacat gcnttggacg ccaatnttna cgacgctatt actattatgc ntggtactaa
       61 tttccgtagc aggcgtaaag tcaacaacta agaaaggagc tgttggggga acagcggtgc
      121 gaaagactac tgtnaagaag gttgctgtga agaacaagaa tatccaacgt atgaatcaga
      181 agcngtngag agaaccacca agagattgtt cagatgctcc gaaacacttg aagcagactt
      241 gtttgatgat ccgtcgaatg gaccttgcga cccgtcgcag gttagngcgt ca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (TAN11-1) V3 neutralizing
Date: 5 Sep 92 10:00:41 GMT
Distribution: bionet
Checksum: 30776     2

LOCUS       HIVTAN111X    275 bp ss-RNA             VRL       05-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (TAN11-1) V3 neutralizing
            domain.
ACCESSION   L01303
KEYWORDS    envelope protein; neutralizing domain; variable region.
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Zwart,G., Wolfs,T.F., Bookelman,R., Hartman,S., Bakker,M.,
            Boucher,C.A., Kuiken,C. and Goudsmit,J.
  TITLE     Greater diversity of the V3 neutralization domain of HIV-1 in
            Tanzania than in the Netherlands; serological and genetic analysis
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     misc_feature    1..275
                     /note="V3 neutralization domain"
                     /note="putative"
BASE COUNT      130 a     45 c     36 g     64 t
ORIGIN
        1 aaataatagt tagatctgaa aatctcacaa ataatgctaa aatcataata gtgcagctca
       61 atgagtctgt atcaattaat tgcacaaggc cctccaacaa tacaagacag agtacacgta
      121 taggaccagg gcaagcactc tatacaaata aaataatagg aaatataaga caagcacatt
      181 gtaatgttag taaaataaaa tggaataaaa ctttacaaca agtagctaat aaattaagag
      241 aactccttaa caaaacaaca ataaatttta aacca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C. elegans cDNA clone cm17h1 encoding Phosphoglucomutase homologous
Date: 10 Sep 92 10:22:42 GMT
Distribution: bionet
Checksum: 52623     2

LOCUS       CEL17H1       287 bp ds-DNA             INV       10-SEP-1992
DEFINITION  C. elegans cDNA clone cm17h1 encoding Phosphoglucomutase homologous
            peptide; 5' end, single read
ACCESSION   Z14634
KEYWORDS    expressed sequence tag.
SOURCE      Caenorhabditis elegans DNA.
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditida;
            Rhabditina; Rhabditoidea; Rhabditidae.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Waterston,R., Martin,C., Craxton,M., Huynh,C., Coulson,A.,
            Hillier,L., Durbin,R.K., Green,P., Shownkeen,R., Halloran,N.,
            Hawkins,T., Wilson,R., Berks,M., Du,Z., Thomas,K., Thierry-Mieg,J.
            and Sulston,J.
  TITLE     A survey of expressed genes in Caenorhabditis elegans
  JOURNAL   Nature Genet. 1, 114-123 (1992)
  STANDARD  full automatic
COMMENT     *source: stage=varied; *source: tissue=whole animal; *source:
            clone_library=Chris Martin sorted cDNA library; *source: sex=
            Hermaphrodite;
            Submitted (16-AUG-1992) to the EMBL Data Library by: Nematode
            Sequencing Project, MRC Laboratory of Molecular Biology, Cambridge
            CB2 2QH, England and Department of Genetics, Washington University,
            St. Louis, MO 63110, USA. E-mail: jes@mrc-lmba.cambridge.ac.uk or
            rw@nematode.wustl.edu
            From EMBL    entry CE17H1;  dated 20-AUG-1992.
BASE COUNT       77 a     59 c     70 g     72 t      9 others
ORIGIN
        1 agcctaaaan gggaatcncc gtcgttgaaa cccgcacaaa accattcgca ggacagaaac
       61 ccggancatc tggtcttcgc aaacgggttc cggaattcca gcagcagaat tacacggnaa
      121 actttnttca agcaattttg gatgctggtc ttggatcgna aaagaagggt tctcanttgg
      181 ttgttggtgg agatggacgg tttctttnga tggaagccac aaatgtgatt attaaaattg
      241 cagcagccaa ttgggctttc ccgtcttatc gtcggtcaaa acggntt
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bovine viral diarrhea virus mRNA sequence.
Date: 11 Sep 92 10:02:54 GMT
Distribution: bionet
Checksum: 15749     2

LOCUS       BVDMSEQJ      781 bp ss-mRNA            VRL       11-SEP-1992
DEFINITION  Bovine viral diarrhea virus mRNA sequence.
ACCESSION   M87814
KEYWORDS    .
SOURCE      Bovine viral diarrhea virus cDNA to mRNA.
  ORGANISM  Bovine viral diarrhea virus
            Viridae; ss-RNA enveloped viruses; Pestiviridae.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Qi,F.-X., Ridpath,J., Lewis,T.L., Bolin,S.R. and Berry,E.S.
  TITLE     Analysis of the bovine viral diarrhae virus genome for possible
            cellular gene insertions
  JOURNAL   Virology 189, 285-292 (1992)
  STANDARD  full automatic
BASE COUNT      267 a    141 c    207 g    166 t
ORIGIN
        1 taaaaacacg tatgtactac atgcacagga aagttataga agagatctca ggaggtacca
       61 acatgatgtc caggttagtg gcggcactta tagagctgaa ctggtccatg gaagaagaag
      121 aaagcaaagg cttgaagaag ttttatttat tgtctggaag gttgaggaac ctaataataa
      181 aacacaaagt aaggaatgat accgtggctc gtcggtacgg agaggaagaa gtttacggca
      241 tgccaaagat catgactata ataagggcca gtactctgaa taagaacaag cactgcataa
      301 tatgcactgt atgcgaaggc cgaaagtgga aaggtggtac ctgcccaaag tgtggacgcc
      361 acggaaaacc cataacgtgt gggatgtcac tagcagattt tgaagaaagg cattataaaa
      421 ggatttttat aagggaaggc aactttcaat ggcccttcag acaagaatat aatgcatatt
      481 ggcagccaaa gtaaaaatgc tcatggtagg caacctagga gaagaaatcg gtgatttaga
      541 acacctagga tggatcctaa ggggacctgc cgtgtgcaag aaaataactg agcacgaaaa
      601 atgccacgtt aacatactgg acaagctgac tgcgtttttc ggggttatgc caagaggaac
      661 cacaccaaga gctccggtga gattccctac agcattacta aaggtaagga ggggattgga
      721 aaccggttgg gcttacacgc atcaaggtgg cataagctca gtggaccatg tgactgctgg
      781 c
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bovine viral diarrhea virus mRNA sequence.
Date: 11 Sep 92 10:02:47 GMT
Distribution: bionet
Checksum: 63475     2

LOCUS       BVDMSEQB      881 bp ss-mRNA            VRL       11-SEP-1992
DEFINITION  Bovine viral diarrhea virus mRNA sequence.
ACCESSION   M87806
KEYWORDS    .
SOURCE      Bovine viral diarrhea virus cDNA to mRNA.
  ORGANISM  Bovine viral diarrhea virus
            Viridae; ss-RNA enveloped viruses; Pestiviridae.
REFERENCE   1  (bases 1 to 881)
  AUTHORS   Qi,F.-X., Ridpath,J., Lewis,T.L., Bolin,S.R. and Berry,E.S.
  TITLE     Analysis of the bovine viral diarrhae virus genome for possible
            cellular gene insertions
  JOURNAL   Virology 189, 285-292 (1992)
  STANDARD  full automatic
BASE COUNT      289 a    158 c    242 g    192 t
ORIGIN
        1 ctaaaacacg tatgtactac atgcatagaa aggttattga agagatatca ggaggtacca
       61 atgtgatgtc aagagtgata gcagcactca tagagttaaa ttggtccatg gaagaagaag
      121 ggagcaaggg cttgaagaag ttttttatac tgtctggaag gttgaggaac cttataataa
      181 agcataaggt taggaaccag actgtagcaa gctggtatgg ggaggaagaa gtctacggca
      241 tgccaaaatt catgaccata ataagggcct gcacactaaa caagaataaa cattgcataa
      301 tatgcactgt atgtgaggct agaaagtgga agggaggcaa ctgtcctaaa tgtggccgcc
      361 acgggaagcc catcacttgt gggatgactc tagcggattt tgaagaaagg cactacaaga
      421 gaatttttat aagggaaggt aacttcgaag gacccttcag gcaggaatac aatgggtttg
      481 tacaatacac cgctagggga caattgttcc tgacatattg gcaaccaaag taaaaatgct
      541 catggtaggc aacctaggag aagaaatcgg cgatctagaa cacctaggat ggatcttaag
      601 gggacctgcc gtgtgcaaga aaataactgg gcacgaaaaa tgccatgtta acatactgga
      661 caagctgact gcgtttttcg gggttatgcc aagaggaacc acacccaggg ctccggtgag
      721 gttcccgaca gcattactaa aggtaaggag gggattggaa accggttggg cctatacgca
      781 tcaaggtggc ataagctcag tagaccatgt gaccgctggc aaggatctat tggtttgcga
      841 cagtatgggt aggactagag tggtttgcca aagcaacaac a
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Chimpanzee alphoid repetitive sequence, monomers 1 and 2, clone
Date: 12 Sep 92 10:01:46 GMT
Distribution: bionet
Checksum: 16032     2

LOCUS       CHPRSAAY      340 bp ds-DNA             PRI       12-SEP-1992
DEFINITION  Chimpanzee alphoid repetitive sequence, monomers 1 and 2, clone
            C-alpha-RI(1020), 15-208 II.
ACCESSION   L01727
KEYWORDS    alphoid repetitive sequence.
SOURCE      Pan troglodytes DNA.
  ORGANISM  Pan troglodytes
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Pongidae.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Joergensen,A.L., Laursen,H.B., Jones,C. and Bak,A.L.
  TITLE     Evolutionarily different alphoid repeat DNA on homologous
            chromosomes in human and chimpanzee
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 3310-3314 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     repeat_region   1..340
                     /rpt_family="alphoid repeat"
                     /note="monomer 1= 1-171; monomer 2= 172-340"
BASE COUNT       99 a     55 c     70 g    116 t
ORIGIN
        1 aattttgagt aacttctttg tgttgtgtgt attcagctca cagagttgaa cctttctttg
       61 gacagagcag atttgaaact ctctttttgt ggaaattgca attggagatt tcaagcgatt
      121 ttaggccaat gtgagaaaag gaaatatctt cgtataaaaa ctagacagaa tcattctcag
      181 aaactactat gtgatgtgtg cattcagctc acagatttta acctttctgt tcatacagca
      241 gtttggaaac actctgtttg taaagtctgc aagtggatat ttggacctcc ttgaggactt
      301 cgttcgaaac gggatttctt catataatgc tagatagaag
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: N.meningitidis porA gene encoding class I outer membrane protein
Date: 10 Sep 92 10:34:44 GMT
Distribution: bionet
Checksum: 29724     3

LOCUS       NGOMC106V2    141 bp ds-DNA             BCT       10-SEP-1992
DEFINITION  N.meningitidis porA gene encoding class I outer membrane protein
            variable region 2 (partial)
ACCESSION   Z14278
KEYWORDS    outer membrane protein; outer membrane protein I; porA gene.
SOURCE      Neisseria meningitidis DNA.
  ORGANISM  Neisseria meningitidis
            Prokaryotae; Gracilicutes; Scotobacteria; Neisseriaceae.
REFERENCE   1  (sites)
  AUTHORS   Barlow,A.K., Heckels,J.E. and Clarke,I.N.
  TITLE     The class 1 outer membrane protein of neisseria meningitidis: gene
            sequence, structural and immunological similarities to gonococcal
            porins
  JOURNAL   Mol. Microbiol. 3, 131-139 (1989)
  STANDARD  full staff_review
REFERENCE   2  (sites)
  AUTHORS   McGuinnes,B., Barlow,A.K., Clarke,I.N., Farley,J.E., Poolman,J.T.
            and Heckels,J.E.
  TITLE     Comparative sequence analysis of the class 1 protein gene (porA)
            from three strains of Neisseria meningitidis: synthetic peptides
            define the epitopes responsible for serosubtype specificity
  JOURNAL   J. Exp. Med. 171, 1871-1882 (1990)
  STANDARD  full staff_review
REFERENCE   3  (bases 1 to 141)
  AUTHORS   McGuinness,B.T.
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
REFERENCE   4  (sites)
  AUTHORS   McGuinness,B.T., Lambden,P.R. and Heckels,J.E.
  TITLE     Class 1 outer membrane protein of Neisseria meningitidis: Epitope
            analysis of the antigenic diversity between strains, implications
            for subtype definition and molecular epidemiology.
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
COMMENT     *source: strain=MC106;
            From EMBL    entry NMMC106V2;  dated 17-AUG-1992.
FEATURES             Location/Qualifiers
     CDS             <1..>141
                     /function="Fragment encodes P1.9subtype specificity"
                     /note="Entire sequence (produced bydirect sequencing of
                     PCR amplified material)represents an internal fragment of
                     the porA genecontaining one of the variable regions
                     (VR2)encoding the P1.9 epitope."
                     /product="Class 1 outermembrane protein variable region 2"
                     /gene="porA"
                     /label=VR2
                     /codon_start=1
                     /translation="QFVPAQNSKSAYTPAYVDEQSKYHAAVVGKPGSDVYYAGLNYKN
                     GGF"
                     /citation=[3]
                     /citation=[1]
BASE COUNT       34 a     31 c     39 g     37 t
ORIGIN
        1 caattcgttc cggctcaaaa cagcaagtcc gcctatacgc cggcttatgt ggatgagcag
       61 agtaagtatc atgcggctgt tgtcggcaag cccggatcgg atgtgtatta tgccggtctg
      121 aattacaaaa atggcggttt t
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Chimpanzee alphoid repetitive sequence, monomers 1 and 2, clone
Date: 12 Sep 92 10:01:30 GMT
Distribution: bionet
Checksum: 30357     2

LOCUS       CHPRSAAG      340 bp ds-DNA             PRI       12-SEP-1992
DEFINITION  Chimpanzee alphoid repetitive sequence, monomers 1 and 2, clone
            C-alpha-RI(680), 14-1550 II.
ACCESSION   L01709
KEYWORDS    alphoid repetitive sequence.
SOURCE      Pan troglodytes DNA.
  ORGANISM  Pan troglodytes
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Pongidae.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Joergensen,A.L., Laursen,H.B., Jones,C. and Bak,A.L.
  TITLE     Evolutionarily different alphoid repeat DNA on homologous
            chromosomes in human and chimpanzee
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 3310-3314 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     repeat_region   1..340
                     /rpt_family="alphoid repeat"
                     /note="monomer 1= 1-171; monomer 2= 172-340"
BASE COUNT       96 a     61 c     71 g    112 t
ORIGIN
        1 agttctcggt aacttctttg tgttgtgtgt atgcagctca cagaattgaa cctttcttta
       61 gacagagcag atttgaaact ctctttttgt ggattttgaa attggagatt tcaagcgatt
      121 tgaggccaaa ggttgaaaag gaaatatctt cttttaaaaa ctagacggaa tcattctctg
      181 aaacaactta atgatttgtg cattcagctc acagagttta actttccttt tcatacagca
      241 gctaggaaac actctgtttg taaaatccgg aagcggacat ttggacctct ttgaggcctt
      301 cgttggcaac gggattcctt catgtaatgc tagacagaag
//