From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Gallid herpesvirus type 1 40kd MDV Eco Q protein gene, complete
Date: 29 Dec 92 19:49:36 GMT
Distribution: bionet
Checksum: 37951 6

LOCUS       HSMMDVECOQ   2466 bp ds-DNA             VRL       09-DEC-1992
DEFINITION  Gallid herpesvirus type 1 40kd MDV Eco Q protein gene, complete
            cds.
ACCESSION   M89471
KEYWORDS    MDV Eco Q protein.
SOURCE      Gallid herpesvirus type 1 (strain GA) (library: pBr328) DNA.
  ORGANISM  Gallid herpesvirus type 1
            Viridae; ds-DNA enveloped viruses; Herpesviridae;
            Gammaherpesvirinae.
REFERENCE   1  (sites)
  AUTHORS   Jones,D., Lee,L., Liu,J.-L., Kung,H.-J. and Tillotson,J.K.
  TITLE     Correction: Biochemistry
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Jones,D., Lee,L., Liu,J.-L., Kung,H.-J. and Tillotson,J.K.
  TITLE     Marek disease virus encodes a basic-leucine zipper gene resembling
            the FOS/JUN onocogenes that is highly expressed in lymphoblstoid
            tumors
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 4042-4046 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     enhancer        25..38
                     /note="CREB site and extended palindrome"
     variation       replace(88..89,"ggg")
                     /note="strain differences"
     TATA_signal     146..152
     GC_signal       329..334
     variation       replace(340,"c")
     variation       replace(423,"c")
     variation       replace(458,"g")
     variation       replace(486,"a")
     variation       replace(583,"g")
     variation       replace(1113,"c")
     old_sequence    replace(1244..1246,"cg")
                     /citation=[2]
     misc_recomb     1353
                     /note="genomic fusion to MDV BamHID in RP1 viral
                     population"
     variation       replace(1387,"t")
     variation       replace(1481,"t")
                     /note="differences in GA isolates"
     CDS             355..1374
                     /standard_name="
                     40 kD MDV Eco Q protein (meq)"
                     /note="40 kd"
                     /product="MDV Eco Q protein"
                     /codon_start=1
                     /translation="MSQEPEPGAMPYSPADDPSPLDLSLGSTSRRKKRKSHDIPNSPS
                     KHPFPDGLSEEEKQKLERRRKRNRDAARRRRRKQTDYVDKLHEACEELQRANEHLRKE
                     IRDLRTECTSLRVQLACHEPVCPMAVPLTVTLGLLTTPHDPVPEPPICTPPPPSPDEP
                     NAPHCSGSQPPICTPPPPDTEELCAQLCSTPPPPISTPHIIYAPGPSPLQPPICTPPP
                     PDAEELCAQLCSTPPPPICTPHSLFCPPQPPSPEGIFPALCPVTEPCTPPSPGTVYAQ
                     LCPVGQAPLFTPSPPHPAPEPERLYARLTEDPEQDSLYSGQIYIQFPSDTQSTVWWFP
                     GDGRP"
BASE COUNT      610 a    639 c    586 g    631 t
ORIGIN      
        1 gaattcggtg atataaagac gatagtcatg catgacgtgg ggggctggat cgactgatat
       61 ctaatggttc gggagtgata cggagacggg gggggggggg aaatgatcga tttataccta
      121 cctcttaaat aaactattgc tcctttataa aatgacaggt gaattgtgac cgttcgcgaa
      181 cgtgtaattc ttcaatactt tcgggtctgt gggtgttgct tttttaatta ttattttggt
      241 tcggggaggt tggtgctgga atgttaagaa taaattccgc acactgattc ctaggcaggc
      301 gtctcttgca ggtgtatacc agggagaagg cgggcacggt acaggtgtaa agagatgtct
      361 caggagccag agccgggcgc tatgccctac agtcccgctg acgatccgtc ccccctcgat
      421 ctttctctcg ggtcgacttc gagacggaaa aaaaggaaaa gtcacgacat ccccaacagc
      481 ccctccaaac accccttccc tgacggccta tctgaggagg agaaacagaa gctggaaagg
      541 aggagaaaaa ggaatcgtga cgccgctcgg agaagacgca ggaagcagac ggactatgta
      601 gacaaactcc atgaagcatg tgaagagctg cagagggcca atgaacacct acgtaaggaa
      661 attcgagatc taaggactga gtgcacgtcc ctgcgtgtac agttggcttg tcatgagcca
      721 gtttgcccta tggcggtacc cctaacggtg acccttggac tgcttaccac cccgcacgat
      781 cccgttcctg aacctcccat ttgcactcct ccacctccct caccggatga acctaacgct
      841 ccacattgct ccggttccca acctcctatc tgtacccccc ctcctcccga tacggaggaa
      901 ctttgcgccc agctctgctc gaccccacca cctcccatct ctactcccca tattatctac
      961 gctccggggc cttcccccct ccaacctcct atctgtaccc cccctcctcc cgatgcggag
     1021 gagctttgcg cccagctctg ctcgacccca ccacctccca tctgtactcc ccattccctc
     1081 ttctgccctc cccagcctcc atctccggag ggaatcttcc ctgcattgtg tcctgttacc
     1141 gagccgtgta cccctccatc gccggggacg gtttacgctc agctttgtcc tgttggccag
     1201 gctccccttt ttaccccatc tcccccacat ccggctccgg agccggagag gctttatgct
     1261 cgtcttaccg aggatcccga acaggattcc ttgtattcgg gccagattta tattcagttt
     1321 ccctcggata ctcagtctac ggtctggtgg tttccaggtg acgggagacc ctgatgatcc
     1381 gcattgcgac tctcagcagc acatcgtcta tgccccatgt ttcttctccc ctagttatat
     1441 ataatagttt tcatagtttc gggaagatca acataaagga aagggttaaa ggcattattt
     1501 atcgatttac tgacataaaa aaatcctctg gggtaacaaa ttttccctta ccgtgtagct
     1561 tagactcgga agaactattt taagttacat ggtcaaaaga tttgttggct ccaggagttc
     1621 cgaagtatga gataaactta gctatgtgga aaacttctgg ggcaacatct ctcggcccca
     1681 gactgcttaa atggcaaatt ctcgttctat acagaacggt tggggaaggg gggggggggg
     1741 gtatatggag tattattcgg gatatggctt ctatgaagct gcggtaagtt ttccaggctc
     1801 aaaaactatg cctggctgtt ttttttttta gaagggatat ggacatcgca cattaaggaa
     1861 tattaaagat aacaggatgg acattcggat gtaaaaggaa taagcgaaac ctttagcaga
     1921 tgtgagttaa tgcagtctcg tataattcgg tggtgctgat taggttatcg taaggaacaa
     1981 cacgattgat ctctcatccg cgtcccagca atcaggccta tgtccctctc ctgtggccag
     2041 ctcactggct gtgcactgtg cgattctaag tgctacagtc gtgagcagat caatggatcg
     2101 gggctcgcgc aacactactg taattaaata ttcgtttatg aattatgcaa atatgcacag
     2161 ataatatata cagggatgca cagacatact cctatgcacc gatacacagg cacataggca
     2221 gatgtcgaca ttaacgaata tacaggcacg gacctccagg aacatatgga aaatacctca
     2281 tcgcagagac gcttatgcag gagtaatctg cgttaagtcg ttactggatt gtaacggcta
     2341 tccggagact ctcttcccct tttgcttgtt cactgtgcgg cattattaca tttacaccgg
     2401 taatgctgcg catgaaagag cgaacggaac gaggctcgta cgacattaca agaatagttt
     2461 gaattc
//