From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mus musculus e-beta mRNA, exons and transposon.
Date: 1 Sep 92 10:03:07 GMT
Distribution: bionet
Checksum: 09716     7

LOCUS       MUSEBTAA     2773 bp ss-mRNA            ROD       01-SEP-1992
DEFINITION  Mus musculus e-beta mRNA, exons and transposon.
ACCESSION   M73960
KEYWORDS    e-beta domain.
SOURCE      Mus musculus Lymphoma cDNA to mRNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Saito,H., Maki,R.A., Clayton,L.K. and Tonegawa,S.
  TITLE     complete primary structures of the e-beta chain and gene of the
            mouse major histocompatibility complex
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 80, 5520-5524 (1983)
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Malstrom,C.E.
  TITLE     Expression of intracisternal type A particles in normal mouse
            lymphoid tissues and in the B cell lymphoma A20/2J
  JOURNAL   Thesis (1991) Molecular and Cell Biology, Pennsylvania State
            University
  STANDARD  full staff_review
REFERENCE   3  (bases 1 to 2773)
  AUTHORS   Malstrom,C.E., Kotsenas,A.L. and Jones,B.
  TITLE     Interaction ofH-2Eb with an IAP retrotransposon in the A20/2J B
            cell lymphoma
  JOURNAL   Immunogenetics 36, 238-247 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     misc_feature    1..2773
                     /note="Sequence indicates the splicing of an
                     intercisternal A particle into the transcript of the MHC
                     II E-beta gene. Concensus splice sites appear to have been
                     used.  The exo"
                     /note="putative"
                     /citation=[2]
                     /citation=[3]
     exon            1..149
                     /note="leader"
                     /note="putative"
     transposon      complement(199..1762)
                     /note="intracisternal A particle type II"
                     /note="putative"
     exon            1793..2032
                     /note="beta-1 domain"
                     /note="putative"
     exon            2033..2314
                     /note="beta-2 domain"
                     /note="putative"
     exon            2315..2425
                     /note="transmembrane"
                     /note="putative"
     exon            2426..2449
                     /note="cytoplasmic domain"
                     /note="putative"
     exon            2450..2463
                     /note="cytoplasmic domain"
                     /note="putative"
     3'UTR           2464..2773
                     /note="putative"
     conflict        2563
                     /note="Sequence published by Saito et al. has a T at this
                     position."
                     /citation=[2]
                     /citation=[3]
                     /citation=[1]
     conflict        2569
                     /note="Sequence published by Saito et al. has a T at this
                     position"
                     /citation=[2]
                     /citation=[3]
                     /citation=[1]
BASE COUNT      570 a    692 c    844 g    664 t      3 others
ORIGIN
        1 gaatccgtct gaagtttgcc ttcccctctg actcctgtgt ctcctctcct gcagcatggt
       61 gtggctcccc agagttccct gtgtggcagc tgtgatcctg ttgctgacag tgctgagccc
      121 tccagtggct ttggtcagag acaccagacg gtgcttccct tcccctcctg tcactcaaga
      181 cttcctgtta atggaactct gttgttcgac gcgttctcac ggccggccag gaggagcaca
      241 gcagccaggg tcttctgcgg caaagctttg ttgcttgcat ctttttgggg ccagagtgta
      301 ggaggcaggg gagagaggca ggagagagaa gcaagagaga gaagcaagag agagaggcaa
      361 gagagagaag caggagacag aagcagggga gagaggcagg gggggagagg ccagagagag
      421 ggaaaagcga gaccccttct attttaggga gaacaaccat tgcctgggcc ctctccctga
      481 ttggctgcgg ccatggccga gctgacgttc gcggggggga cagagtacgg gtggtcgtgg
      541 atgcccttgc tcatgcgcag attgtttgtt tgccaacttg gagcgcggga tgtcnnngcc
      601 atcttgtgac ggcgaatgtg ggggcggctt cccacggttc cccctttttc ttttgatggg
      661 agcgggtggg ccacccatat tgatgagggt ggggatggag gtcgagtccc cagtgtgtag
      721 gtaaaggagc catgtacagg attagctctt aggcttacag gcttttgccc agagcaaccc
      781 tgacctgctc ccgtgtcgtt ttgcctgggg gaagggagct gggacactgg accttcatga
      841 aagatggcgt gtctccctag aataggctcg tatgtgccgc ggggcccttc tactgcagtg
      901 cttagccttg caactctctc gggctgctgg ggcacactca ctctgtctcg tgcaatgagt
      961 ctagcctcgt gggatgtggg agctgagtgg aaggcgacct gttgcctagg catggatatg
     1021 tcaggggagg ctccatgttc tagtcctgcg ggcgcctggg caataaccac cttgtctctc
     1081 ttggtttggg ccttgagctt gcagaccaat cagggaagca acactagtcc acagcagggt
     1141 gtgtctccaa ataatattaa tcccacccaa ttttttaggg aaggagagtg ctgaggagat
     1201 ccagttgggt aatcttttgg tcggcgacag gtccaggcgc gtggagttga cctggagtct
     1261 cagttctcga aggatctgtg acatatactg aaagggactt tttggcaaat tggctgccct
     1321 ggtgaattta gcatactgaa tggaagtgac acacaatccc ggaaactttt gttcacatcc
     1381 ctgctgagtt atttgtcatg gtgcatctgg ttgtatctgg acaagatcta tgagttgatt
     1441 gaccagcgtg gggcctctct gtatcttgac attggctgag gcctgttcgt ctatgactgt
     1501 ggtcgctgag gctgacaaag tgttagtggt gtcagtcgtc tggacctgtc cagacagagc
     1561 cagggctgtc tgaattgggg ccaagccagt tcccggttgg tggtggaaag gcgggagaat
     1621 gcttgagcat tgtgcgtcgc cgtcattggg ggtggaagtg tcgacgttgt cccccggcgc
     1681 tgctctctct ttattgttgg cgccctggac gtcaccagga cgagggacat tggtgttccc
     1741 ttggtcagtc tggatttttc ggcacggttt ttggaatacg ttacatctga gtgtcatttc
     1801 tacaacggga cgcagcacgt gcggtttctg gagagattca tctacaaccg ggaggagaac
     1861 ctgcgcttcg acagcgacgt gggcgagtac cgcgcggtga cagagctggg gcggccagac
     1921 gccgagaact ggaacagcca gccggagatc ctggaggatg cgcgggcctc ggtggacacg
     1981 tactgcagac acaactatga gatctcggat aaattccttg tgcggcggag agttgagcct
     2041 acggtgactg tgtaccccac aaagacgcag cccctggaac accacaacct cctggtctgc
     2101 tctgtgagtg acttctaccc tggcaacatt gaagtcagat ggttccggaa tggcaaggag
     2161 gaggaaacag gaattgtgtc cacgggcctg gtccgaaatg gagactggac cttccagaca
     2221 ctggtgatgc tggagacggt tcctcagagt ggagaggttt acacctgcca ggtggagcat
     2281 cccagcctga ccgaccctgt cacggtcgag tggaaagcac agtccacatc tgcacagaac
     2341 aagatgttga gtggagttgg gggcttcgtg ctgggcctgc tcttcctggg agcggggctg
     2401 ttcatctact tcaggaacca gaaaggacag tctggacttc agccaacagg actcctgagc
     2461 tgagatgaag taacaaggct gaaggaagga gttccccccg tgtctccatg ccatgaaaac
     2521 atgtcctgct tggcccacat ccctccagag acactgctct tccaggacct ggctcctcct
     2581 gattctccac cctggagatc tgtgctcctg atggctgctt atccctgacc caggccttgc
     2641 agctcccaga acagaggccc cactcttcag atctcctgtc cccttttgtc ccttgccttt
     2701 tgtctggcac ttctgagcca gtctgctgtc atatgctttc ttacattttt ctcaaataaa
     2761 caaataatga aag
//