From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: orf 31.-2...orf 30.1 [bacteriophage T4, Genomic, 9 genes, 2994 nt]
Date: 27 Jan 93 05:58:14 GMT
Distribution: bionet
Checksum: 41088 9

LOCUS       S118889      2994 bp    DNA             PHG       15-JAN-1993
DEFINITION  orf 31.-2...orf 30.1 [bacteriophage T4, Genomic, 9 genes, 2994 nt]
ACCESSION   S49161
KEYWORDS    .
SOURCE      bacteriophage T4
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 2994)
  AUTHORS   Nivinskas,R., Zajanckauskaite,A., Raudonikiene,A. and Viteniene,I.
  TITLE     The nucleotide sequence between genes 31 and 30 of bacteriophage
            T4.
  JOURNAL   DNA Seq. 2, 405-409 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 118889] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2.
FEATURES             Location/Qualifiers
     CDS             1..12
                     /partial
                     /note="Description: orf 31.-2"
     CDS             123..455
                     /note="Description: orf 31.-3;  For the protein sequence
                     (NCBI gibbsq 118890):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MKTINLNAAVKTKCFNGKYDETMWFLMAVEGDIIEVETTEGMGT
                     DFTFTIQVHNFFTGWIYELNTVIVGKIEQNELGEWHYVTARQRAERLIEKMKKVGKLD
                     MQHWKVVK"
     CDS             524..889
                     /note="Description: orf 30.7;  For the protein sequence
                     (NCBI gibbsq 118892):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MNYINFERKYVSNGIAGSIDTICLWKHQNGSVCEIEQYMTPNYV
                     YMRFENGITVSITMKGSNFKIALDDDFRQRDLGTHPCWNGANRKLLVKTWIRHILSNR
                     AKPEHLEAIFDVVLNEFDI"
     CDS             931..1218
                     /note="Description: orf 30.6;  For the protein sequence
                     (NCBI gibbsq 118894):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MFMTTYFDTRKNFCEVVFSKAPKDLPAHLQLTSESIKNYVDVVC
                     PLEFRTVNGRDTLAITKLNREIDIDPSIAREINISDIGGGNVKSHGFQMRF"
     CDS             1218..1415
                     /note="Description: orf 30.5;  For the protein sequence
                     (NCBI gibbsq 118895):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MKFFLGQTVELKGVGIPGLISKVLPPFKWSGIQIKEAYIVSWVD
                     GNEDLRMGDELSPIYGLKELV"
     CDS             1412..1618
                     /note="Description: orf 30.4;  For the protein sequence
                     (NCBI gibbsq 118896):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MNIINKIFGIQYIKVTYKVTDKNPYTDEHEEPQVESIILEKDPN
                     WPVEFRLPCYGHWADVEIISIENV"
     CDS             1611..2069
                     /note="Description: orf 30.3;  For the protein sequence
                     (NCBI gibbsq 118898):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MSELEIRSNFRWPSCALSNFAQWPFVMDGIQFGGLEGFLQGCKV
                     KNVEQQRRIFGLSGLAAQQAGRSYARAQDRGTLFWLGVPFSRYSPAWKELYTNAYFEA
                     AIQNKGFRDALQASKGKVLKHSIASGLTKDDTILTEAEFIDVLNLLRDSL"
     CDS             2066..2902
                     /note="Description: orf 30.2;  For the protein sequence
                     (NCBI gibbsq 118899):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2."
                     /codon_start=1
                     /translation="MKPTILTDIDGVCLSWQSGLPYFAQKYNLPLEHILKMIQDEKFI
                     SPGKLFNCDEELGVKLIEKYNRSDFIRYLSPYKDALCVINKLKEDYNFVAVTALGDSI
                     DALLNRQFNLNALFPGAFSEVLMCSHDSSKEELFKKAKEKYNVICYIDDLAHHCDHAS
                     EILRVPVYWMARGERDNIPKTAQRVYTWNDVENKLFSPKENKESFDSEKAIKDVIEKM
                     IKNDSFPWNTTWRTPGFNPYNPYHPYQTHPFQTWNYIKPGGIEYLYNRPTCGDNIFQG
                     AF"
     CDS             2902..2994
                     /partial
                     /note="mismatches(9[V->E],10[F->N]).  Description: orf
                     30.1;  For the protein sequence (NCBI gibbsq 118900):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 2.
                     Author-given protein sequence is in conflict with the
                     conceptual translation"
                     /codon_start=1
                     /translation="MFVVHTIYVFEGNTTRDYGHVNQFFRCNPEF"
BASE COUNT      973 a    472 c    592 g    957 t
ORIGIN      
        1 cagaaagcat aagttgagga ctccttcggg agtccttttt tattttccaa agattgcaca
       61 aagttgttta cagtatagtt cctttgtgat agtattatct tacacaaaca aaggagaata
      121 aaatgaaaac gattaatctg aacgctgcag ttaaaactaa atgcttcaat ggtaaatatg
      181 atgaaactat gtggttctta atggcagttg aaggtgatat tattgaagta gaaacaacag
      241 aaggtatggg aacagatttc acctttacaa ttcaagttca taatttcttt actggttgga
      301 tttatgaatt gaatacagta atcgttggaa aaattgaaca aaatgaatta ggcgaatggc
      361 attatgttac agctcgccaa cgtgcagaac gcttaattga gaagatgaaa aaagttggta
      421 aacttgacat gcagcattgg aaagtagtaa aataattgtt tactttggta caggatatga
      481 tattatatac ctgtaccgca attaaacatc tcggagaata aaaatgaact acattaactt
      541 tgaacgtaaa tatgtttcta atggtattgc aggttctatt gatactattt gcctctggaa
      601 acatcaaaat ggatcagtat gcgaaattga acagtatatg actcctaact acgtttatat
      661 gcgatttgaa aacggtatca cggtttcaat cacgatgaaa ggttccaact tcaaaatcgc
      721 tctggatgat gatttccgcc aacgcgattt agggactcat ccttgctgga atggtgctaa
      781 tcgtaaactc ttagttaaaa cttggattcg tcatattctg agtaacagag ctaaacctga
      841 gcatcttgaa gcaatctttg atgtagttct taatgaattt gatatttaaa ataaaatgag
      901 gggcttcagc cccttactga ggaaaatatt atgtttatga ctacttattt tgatacccgc
      961 aaaaatttct gtgaagtggt tttctcaaag gcacctaaag accttcctgc acatttgcaa
     1021 cttactagcg aatcgattaa aaactacgtt gatgtggttt gtcctttaga gttccgtact
     1081 gtaaatgggc gtgatacttt agctatcact aaactcaatc gtgaaattga cattgaccct
     1141 tcaattgcgc gtgaaattaa catttctgat attggcggcg gtaatgttaa atcgcacggt
     1201 tttcagatga ggttctaatg aaattctttt taggtcaaac tgttgaatta aagggagttg
     1261 gtatacctgg attaatttct aaggttctac ctccatttaa atggagtggt attcaaataa
     1321 aagaggctta tattgtttcc tgggtagatg gaaatgaaga ccttcgtatg ggtgatgaat
     1381 tatctcctat ctacggatta aaggaattag tatgaatata attaataaga tttttggaat
     1441 tcagtacatt aaggtcacat ataaagtaac agataaaaat ccgtatactg atgaacacga
     1501 agaaccacaa gttgagtcta ttatattaga aaaggaccct aactggccag ttgaatttcg
     1561 tcttccttgc tatggtcatt gggctgatgt tgaaattata agcattgaaa atgtctgagt
     1621 tagagattag aagcaatttt aggtggccat catgtgcatt aagtaatttc gcccaatggc
     1681 ctttcgttat ggatggtatt caatttggag gtcttgaagg attcctccaa gggtgtaagg
     1741 tgaaaaatgt tgaacaacaa cgtcgtatat ttgggttatc cgggcttgcc gcccaacaag
     1801 ctggaaggtc ttatgctaga gctcaggacc gtgggaccct cttttggctt ggagttccgt
     1861 tttcaagata ctccccggcg tggaaagaat tatacacaaa tgcatatttt gaagcagcga
     1921 ttcaaaacaa gggctttcgt gatgcattac aagcctcgaa aggaaaagtt ttgaagcaca
     1981 gcattgctag tggtctaaca aaagatgata caatactaac cgaagctgaa tttattgatg
     2041 tgttaaacct attaagagac tctctatgaa gcctactatt ttaactgata ttgatggagt
     2101 atgtttaagc tggcaatcag gccttcctta ttttgctcag aaatataatc ttccgttaga
     2161 acatatttta aaaatgatcc aagatgagaa atttatttct cctggtaaac tctttaactg
     2221 tgatgaagaa cttggcgtca agttaattga aaaatacaat cgttcggatt ttattcgtta
     2281 cttgtctcca tataaagatg ctctgtgtgt aattaacaaa ttaaaagaag attataattt
     2341 tgttgctgtt acagcattgg gtgattctat tgacgctcta ttaaatcgtc aatttaattt
     2401 gaatgctctt tttcctggtg ctttctcaga agtactgatg tgtagtcatg attcttcaaa
     2461 agaagagttg ttcaaaaaag caaaagagaa atataacgta atttgttata ttgacgatct
     2521 cgctcaccac tgcgatcacg cgagtgaaat attacgtgtt cctgtgtatt ggatggctcg
     2581 aggagagcgt gacaatattc caaaaactgc tcagcgagtt tatacatgga acgatgtaga
     2641 gaataagctt ttttcaccaa aggaaaataa agaaagtttt gatagtgaaa aagctataaa
     2701 agatgtaatt gaaaagatga ttaaaaacga ttcttttcct tggaacacta cctggagaac
     2761 tcctggattt aatccttata atccatatca tccatatcag acgcatccgt ttcagacatg
     2821 gaactatatt aagcccggcg gtatagagta tttgtataat agacctactt gtggtgataa
     2881 tattttccaa ggagcattct aatgtttgtt gttcacacta tttatgaaaa tgaaggtaat
     2941 actacacgtg attacggtca cgtaaatcaa ttttttagat gcaatccaga attc
//