From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Salmonella typhimurium fimbriae Y (fimY) gene, complete cds and
Date: 26 Jan 93 05:53:27 GMT
Distribution: bionet
Checksum: 15835 6

LOCUS       STYFIMYZ     2742 bp ds-DNA             BCT       25-JAN-1993
DEFINITION  Salmonella typhimurium fimbriae Y (fimY) gene, complete cds and
            fimbriae Z (fimZ) gene, complete cds.
ACCESSION   M90677
KEYWORDS    fimbriae Y; fimbriae Z.
SOURCE      Salmonella typhimurium DNA.
  ORGANISM  Salmonella typhimurium
            Prokaryotae; Gram-negative facultatively anaerobic rods;
            Enterobacteriaceae.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Swenson,D.L. and Clegg,S.
  TITLE     Identification of ancillary fim genes affecting fimA expression in
            Salmonella typhimurium
  JOURNAL   J. Bacteriol. 174, 7697-7704 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             523..1245
                     /gene="fimY"
                     /note="putative"
                     /product="fimbriae Y"
                     /codon_start=1
                     /translation="MRSVPRRERHRRLRNAKDCACRYHSPTPQIFDRLELLNQQLNYA
                     LPVGIISQAIITTDNYLGYSLSHYLFSGKRTAAFRSLDDISLWIEKGSLRQLIVDMEA
                     LPVSCIEALNQLRALSWQQSDIQIYLLVSDKTSAITQFIRMAGRFFVLSRRQNLASVR
                     EALLSASKPRLSESFSRTDWLMIETLAQGASLKEIARQQSVPYHRVVYRLKQLITLLN
                     LPHRQSFLRLIQQLNVTFHDIF"
     CDS             1849..2481
                     /gene="fimZ"
                     /note="putative"
                     /product="fimbriae Z"
                     /codon_start=1
                     /translation="MKPASVIIMDEHPIVRMSIEVLLGKNSNIQVVLKTDDSRTAIEY
                     LRTYPVDLVILDIELPGTDGFTLLKRIKSIQEHTRILFLSSKSEAFYAGRAIRAGANG
                     FVSKRKDLNDIYNAVKMILSGYSFFPSETLNFISNTRTPKGGHHDMPLSNREVTVLRY
                     LANGMSNKEIAEQLLLSNKTISAHKANIFSKLGLHSIVELIDYAKSHELL"
BASE COUNT      798 a    627 c    515 g    802 t
ORIGIN      
        1 ccccaacctt catttcttac tcagtaagta aactcactta actttttaca aggcttacga
       61 aatatctcac caataattaa gtaacgatac ctacaggcat ttttttaacg ctgccacaat
      121 gatgcccata atatcctgat agattcaggg gtcgaaaata tatggctgca tcataaatgc
      181 ctggaggagt gtttggtggc acagggtatt ttgttaaagg aaaggataaa tcccccacac
      241 ctggcgtctt cgcccacacg tcattcatat ctcaacagcg aattgttaaa atctgagcca
      301 atcgttaatc tctcaactgc gcaattaatc ggctatgagg tcctgacgca acttccgtca
      361 gaacatgata gcgaagtttt ttttcagcag ttaatgctga tggaaggcat tgaaacatca
      421 gagcaacgaa gcattgcttt ttacgctggt gcaacgatgg aacaaggtta tttatggcca
      481 gccatattac cagatatata ttagagcaat ggaaaaagca ggatgcgcag cgtaccacgc
      541 agggaaagac accgccgttt aagaaatgct aaagactgcg cctgccgtta tcactctcca
      601 acgccgcaga tatttgatcg ccttgagtta ctgaaccaac agctcaatta tgccttgccg
      661 gttggtatca tttctcaggc aataattaca actgacaact acctcggcta ttcattgagt
      721 cactacttat tttccggaaa acgtaccgca gcattccgct cattagatga catttctttg
      781 tggattgaaa aggggtcgct cagacaactg attgtagata tggaggcgct acctgtctcc
      841 tgtattgagg cgcttaacca gctacgcgcg ctcagttggc aacaaagcga tatccagatt
      901 tacctgctgg tatcagataa aacctccgct ataacacagt ttatccgtat ggctgggcgt
      961 ttttttgtcc tgtcgcgacg acaaaatctg gcctcagtac gcgaagcctt gttatcagcc
     1021 tccaaacctc gcttatcgga aagctttagc cgtactgact ggttgatgat tgaaacttta
     1081 gcgcaaggcg cctctttaaa agaaatagca cgtcagcaaa gcgtacctta tcatcgtgta
     1141 gtttaccggc ttaaacaact tatcaccctc cttaaccttc cccacaggca aagctttctt
     1201 cggctgatcc agcagctaaa cgttactttc cacgacattt tttaacgaag taacgttttg
     1261 gtgaataaga ttttttaaga aattacttat tttcacttcc attaaatgta aatatttcac
     1321 ataaaattaa tatttacaac tcgtcctggt aagcgataaa aatttttttc ttacatcgtc
     1381 ccctgttcct cctcgttttt cgaggtctcc agcgtcaaca tctttctgtt attacataac
     1441 aaatactaaa caattagtct ttcatattat ttttatactt aaaaacaaca gtttaaacta
     1501 ctcaatgtca actctaaaga aaatagctcc accacgaaca aattttctat aacgtcacag
     1561 aatatcctac ccgctatcca taattcgcat ttcgcaagac ttttccgaga aatcagacca
     1621 ggtataatcc atattgtttt tacttaatca gaaatttctt ttttgttggt gcgaaatgga
     1681 tattccacat atttattact cttacgcaaa atagccagtc aacagggagg tctcattctt
     1741 tattattgct ccactgtgtg gtgtgtagat ctggctattt cacaatcttt aaggtgtctg
     1801 acgcttatta taaaacgaag gacgcataac agtctgaggc atacaacaat gaaacctgca
     1861 tctgttatca ttatggacga acaccctatt gtaagaatgt cgatcgaagt tttactcggt
     1921 aaaaatagca atattcaggt tgtcctgaaa acggatgata gccgaacagc gatagagtat
     1981 ctgcgcactt atcctgttga ccttgtcatt ctggatattg aattaccggg caccgacggc
     2041 tttaccttac ttaaacgaat caaatctatc caggaacata cccggatact ttttttatcg
     2101 tcgaaatcag aggcttttta tgccggaaga gcaataagag cgggcgcaaa cggatttgta
     2161 agtaaacgca aagacctcaa tgatatttat aatgcggtaa aaatgatttt atccggctat
     2221 tcttttttcc catctgagac gcttaatttc atcagtaata cccgtacccc caaaggcggg
     2281 caccatgata tgccactatc taaccgcgaa gttaccgtgc tgcgctatct ggccaatgga
     2341 atgtctaaca aagaaattgc cgagcaactt ttattgagta acaagactat cagcgcgcat
     2401 aaggccaata tattttctaa acttggcctt cactctatcg ttgagcttat cgattacgcc
     2461 aaatcacacg aattattgta aatgtactcc cggcgaatta tcgttcggga gccacaataa
     2521 cggacactaa ttgtaattga tcaggaaggt cgcatccgcg ttacaagtcc gggctcgacg
     2581 ccatcggcta aggcgatata gttcgcatag aatttcaggg tagcattgcc gttgttgtca
     2641 atatcgacgg ccttctggct gttcaagtgg caatcgacgt tatcgccatc gcgaatttca
     2701 atcgccagtt tttgcgccat tgccgtatca gcaagcgcca gt
//