From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: X.xiphidium Xsrc mRNA
Date: 15 Aug 92 10:03:33 GMT
Distribution: bionet
Checksum: 28995     8

LOCUS       XIPXSRC      3254 bp ss-RNA             VRT       15-AUG-1992
DEFINITION  X.xiphidium Xsrc mRNA
ACCESSION   X64658
KEYWORDS    Xsrc gene; c-src tyrosine kinase; proto-oncogene.
SOURCE      Xiphophorus xiphidium RNA.
  ORGANISM  Xiphophorus xiphidium
            Eukaryota; Animalia; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Atheriniformes; Cyprinodontoidei; Poeciliidae.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Raulf,F., Sam,S., Robertson,S.M., Maeueler,W. and Schartl,M.
  TITLE     The evolutionary highly conserved c-src gene of teleost fish with
            the expression of an alternative transcript specific for the
            genetic melanoma of Xiphophorus
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=ssp.F1; Rio Soto la Marina, Mexico; *source:
            cell_line=A2; *source: clone_library=cDNA A2; *source: clone=
            Xsrc71; *source: chromosome=autosomal;
            From EMBL    entry XXXSRC;  dated 05-MAY-1992.
FEATURES             Location/Qualifiers
     prim_transcript 1..>1696
                     /gene="Xsrc"
     exon            1..102
                     /number=1
     exon            103..335
                     /number=2
     CDS             113..1696
                     /product="c-src tyrosine kinase"
                     /gene="Xsrc"
                     /codon_start=1
                     /translation="MGGSKSKPKDVAQRNRSLDSNISSGGGAGSLHHNSAQQSATPNR
                     STIVDTDPQLVTNNAGLVLFGGVDNNRITPTGVTAFVALYDYESRTETDLSFKKGERL
                     QILNNTEGDWWLANSLTTGKSGYIPSNYVAPSDSIQAEEWFFAKITRRDSERMLLALE
                     NRRGTFVVRESETTKGAYCLSVLDCDNTRGLNVKHYKIRKLDSGGFYITSRTPFATLQ
                     QLVQSYGKHADGLCHTLTDVCPVLKPQTQGLSKDAWEIPRESLRLEVKMGQGCFGEVW
                     RGTWNGTTQVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEF
                     MDQGSLLEFLKGQYSTMLRLPQLVDFASQIASGMAYVERMNYVHRDLRAANILVGDNL
                     VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLVELA
                     TKGRVPYPGMVNREVLDQVERGYRMPCPSECPASLHELMLNCWRKEAEERPTFEYLQG
                     FLEDYFTSTEPQYQPGDNL"
     exon            336..435
                     /number=3
     misc_feature    435^436
                     /note="neural insert splice site"
                     /evidence=EXPERIMENTAL
     exon            436..534
                     /number=4
     exon            535..638
                     /number=5
     exon            639..788
                     /number=6
     exon            789..944
                     /number=7
                     /evidence=EXPERIMENTAL
     exon            945..1124
                     /number=8
                     /evidence=EXPERIMENTAL
     exon            1125..1201
                     /number=9
                     /evidence=EXPERIMENTAL
     exon            1202..1355
                     /number=10
                     /evidence=EXPERIMENTAL
     exon            1356..1487
                     /number=11
                     /evidence=EXPERIMENTAL
     polyA_signal    1751..1756
     polyA_signal    3217..3222
                     /note="used signal"
                     /evidence=EXPERIMENTAL
BASE COUNT      880 a    679 c    738 g    957 t
ORIGIN
        1 ttatttctgg atctgtgagc tcgaagtgtc gctgaacaga tcattgatgt tttgacgaca
       61 caaatttgta cctccagaag agagaagaga ctaaatctcc agggtcttgg ccatgggggg
      121 atccaagagt aagcccaaag acgttgccca gcgaaaccgc agcctcgaca gtaacatcag
      181 ctcaggggga ggggctggca gtctccacca caattcggct caacagtcag cgacacccaa
      241 ccgcagcaca attgtggaca cagatccaca attagtgacc aataatgccg gactcgttct
      301 gtttggaggt gtggacaata acagaataac tccaacaggt gtgacggcat ttgtggcctt
      361 gtacgactac gagtctcgaa cagagacaga tctgtctttc aagaaggggg agcgtctcca
      421 gatactaaat aacacggaag gggactggtg gctggcgaac tccctgacca ccggaaagag
      481 cggttatatc cccagcaatt atgtggctcc atctgactcc atccaggcag aagaatggtt
      541 ctttgccaaa atcacacgcc gtgattcaga aaggatgctg ctagctttag aaaacagaag
      601 agggactttc gtggtgagag agagtgagac taccaaaggt gcttactgtc tgtcagtgtt
      661 ggactgtgac aacaccagag ggctcaacgt gaaacactac aagattagga agctggacag
      721 cgggggcttc tacatcacat cccgcacacc tttcgccaca ctgcagcagc tcgtgcaatc
      781 atacggcaag cacgccgatg ggctgtgtca cactctgaca gacgtttgtc ccgtactgaa
      841 gcctcagact cagggcttat ccaaggacgc ctgggagatc ccgagagagt cgcttcgcct
      901 ggaggtcaag atgggacagg gctgctttgg agaggtctgg agaggaacat ggaacggcac
      961 cacacaggtg gcgatcaaga cgctgaagcc cggcaccatg tcccccgagg cgttcctgca
     1021 ggaagctcag gtcatgaaga aactgagaca cgagaagctg gttcagctgt acgccgtggt
     1081 ttctgaggag cccatctaca tcgtaacaga gttcatggac caaggcagct tattggagtt
     1141 tctgaaggga cagtatagta cgatgctccg cctccctcag ctggtggact ttgcctctca
     1201 gattgcttca gggatggcct acgtagagag gatgaactac gttcatagag atctccgagc
     1261 cgctaacatc ctggttggag ataatctggt ttgcaaagtg gctgattttg gtttggctcg
     1321 cctgattgag gataacgaat atacagccag gcaaggcgcc aagtttccca ttaagtggac
     1381 ggctcctgag gcggcgctct acggacgatt caccattaaa tctgacgtct ggtcatttgg
     1441 gatcctgctg gttgaactgg ccaccaaagg tcgcgtgccc tacccaggca tggtgaacag
     1501 agaggttctg gatcaggtgg agcgcggata caggatgccg tgtccgtctg aatgtcctgc
     1561 ttctctccat gaactgatgc tgaactgctg gaggaaggag gccgaggaga ggcccacctt
     1621 cgagtacctg cagggcttcc tggaggatta cttcacctcc actgagcctc agtaccagcc
     1681 tggggataac ctgtaaccag actgtttgga tatgcaaaaa tggaccggcg catggacatg
     1741 catgtgtggg aataaagggg cagagatcag cataaatctg ggtacaatca ctgactgatt
     1801 ttgttttttt tctcaaagtc attaactttt ttcatacatt tttatccaga gaatctaaaa
     1861 aaaaatcgaa aataattatt tattcgttct ctgattttat gacagatcat ggccaaattt
     1921 gggaatgatt gtctgctgat acgtttttca gtcagacata catttctacc acgattttct
     1981 ttcagatcca atttgaaaca agctcagact gtcttccttt tattgagcct ataataattt
     2041 cttatgatgt tgttgatctg gtttattttg aacttgtttc accctgatca actggaaatg
     2101 tgtcatggct gccattgggg ttcatacagc tgtttgtggt cagaaaaggt caactcagga
     2161 tggggggaaa caaaattaat ctgctgcaaa gatttttgtg ccaatgaaaa tctattttct
     2221 actctatttt tgttctattt ttggtacttt tcttataaca aaaataacta cattgttgct
     2281 ctgaaagggt gatccactgt tccttctgtg tatagatttt aatgtgctga gttttcaaat
     2341 ttattttaag tctcctttca ttttaagatt tgttctttat tcagcactgc tacgtttttt
     2401 ttcttcttag tgccatcttg agcacaattt tacactggag attttttttt gtttctttgt
     2461 ttttgtttta ttttattatt ttttgggggg cgaaggggac aaatgagcaa caggagtgtg
     2521 ttcactgtgg taatgcctct ctatcacctg cagggggcag accatagtgg attcctgttc
     2581 actcacactg taagcatcta cagaaaataa aaattggcat tttaaaactt aattgtaaat
     2641 atctttgatg ctaataattt gtatatatca acttttctta tttattcatt ttaaattaac
     2701 ccaattttaa aaaatttctt tcagcacatg tgcatacttc ttcttgttta tggaatttta
     2761 tgggataata acatgaaagg catataattc attacagtat ttgagcatat tcagtgaaac
     2821 tgacctgata ttttaatgac tgatgaagag tgagttgtga ctcattaaca tcagtactac
     2881 agattttgaa gaaactgagt gctgctgacc ttcctctcca tcttgtcacc tgttcagcat
     2941 gctgactaac aataaattgt ttgaaattgc ttccaatttg tgctcccact taatatttat
     3001 ttgcaaagca aaaaatgcac gtttgtatgc actgtttgtg tcttctgtgg ggttttttag
     3061 gtctccttcc tgcctgtgca gatgttgttt ttaaaaatct gcaggtttcc tacatatacc
     3121 gtattctttt tctaccatat tctgctagta ttttcacata aacaactctt tgtgaaattc
     3181 taccctatac tgttcaaaac tgaaaagtaa atttgaataa aatttgtaca ttggcaaaaa
     3241 aaaaaaaaaa aaaa
//