HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225
Date: 26 Jan 93 05:51:54 GMT
Distribution: bionet
Checksum: 54102 3

LOCUS       SIV225BA1     360 bp ss-RNA             VRL       25-JAN-1993
DEFINITION  Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225
            clone BA1) gp120 (V1, V2) RNA, partial cds's.
ACCESSION   M92663
KEYWORDS    .
SOURCE      Simian immunodeficiency virus 1 month post infection Blood cDNA to
            genomic RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Almond,N.M., Jenkins,A.R., Slade,A., Heath,A.B., Cranage,M. and
            Kitchin,P.A.
  TITLE     Population sequence analysis of a simian immunodeficiency virus
            (32H re-isolate of SIVmac251): A virus stock used for international
            vaccine studies
  JOURNAL   AIDS Res. Hum. Retroviruses 8, 77-88 (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Almond,N.M., Jenkins,A.R., Heath,A.B., Taffs,F. and Kitchin,P.A.
  TITLE     The genetic evolution of the envelope gene of simian
            immunodeficiency virus in cynomolgus macaques infected with a
            complex virus pool
  JOURNAL   Virology 191, 996-1002 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..130
                     /gene="V1"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CNKSETDKWGLTKSLTTTAPTAPTAASKIDMVNETSSCITHDN"
     CDS             130..358
                     /gene="V2"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CTGLEQEQMIGCKFNMTGLKRDKTKEYNETWYSTDLVCEQGNST
                     DNESRCYMNHCNTSVIQESCDKHYWDTIRFRY"
BASE COUNT      141 a     56 c     75 g     88 t
ORIGIN      
        1 tgcaataaaa gtgagacaga taaatgggga ttgacaaaat cattaacaac aacagcacca
       61 acagcaccaa cggcagcatc aaaaatagac atggtcaatg agactagttc ttgtataact
      121 catgataatt gcacaggctt ggaacaagag caaatgatag gctgtaaatt caacatgaca
      181 gggttaaaaa gagacaagac aaaggagtac aatgaaactt ggtactctac agatttggtt
      241 tgtgaacaag ggaatagcac tgataatgaa agtagatgct acatgaatca ctgtaacact
      301 tctgttatcc aagagtcttg tgacaaacat tattgggata ctattagatt taggtattgt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: glp regulon: glpK, glpF {glpK and glpX intergenic region} [Shigella
Date: 27 Jan 93 05:48:30 GMT
Distribution: bionet
Checksum: 22263 2

LOCUS       M252332S1     801 bp    DNA             BCT       12-JAN-1993
DEFINITION  glp regulon: glpK, glpF {glpK and glpX intergenic region} [Shigella
            flexneri, Genomic Mutant, 801 nt, segment 1 of 2] 
ACCESSION   S47683
KEYWORDS    .
SEGMENT     1 of 2
SOURCE      Shigella flexneri
  ORGANISM  Shigella flexneri
            Unclassified.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Truniger,V., Boos,W. and Sweet,G.
  TITLE     Molecular analysis of the glpFKX regions of Escherichia coli and
            Shigella flexneri.
  JOURNAL   J. Bacteriol. 174, 6981-6991 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 117059] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 7.
            Region: glp regulon.  
FEATURES             Location/Qualifiers
     CDS             16..660
                     /gene="glpF"
BASE COUNT      139 a    197 c    215 g    250 t
ORIGIN      
        1 cttcaggatc cgattatgag tcaaacatca accttgaaag gccagtgcat tgctgaattc
       61 ctcggtaccg ggttgttgat ttttttcggt gtgggttgcg ttgcagcact aaaagtcgct
      121 ggtgcgtctt ttggtcagtg ggaaatcagt gtcatttggg gactgggggt ggcaatggcc
      181 atctacctga ccgcaggggt ttccggcgcg catcttaatc ccgctgttac cattgcattg
      241 tggctgtttg cctgtttcga caagcgcaaa gttattcctt ttatcgtttc acaagttgcc
      301 ggcgctttct gcgctgcggc tttagtttac gggctttact acaatttatt tttcgacttc
      361 gagcagactc atcacattgt tcgcggcagc gttgaaagtg ttgatctggc tggcactttc
      421 tctacttacc ctaatcctca tatcaatttt gtgcaggctt tcgcagttga gatggtgatt
      481 accgctattc tgatggggct gatcctggcg ttaacggacg atggcaacgg tgtaccacgc
      541 ggccctttgg ctcccttgct gattggtcta ctgattgcgg tcattggcgc atctatgggc
      601 ccattgacag gttttgccat gaacccagcg cgtgacttcg gtccgaaagt ctttgcctag
      661 ctggcgggct ggggcaatgt cgcctttacc ggcggcagag acattcctta cttcctggtg
      721 ccgcttttca gccctatcgt tggcgcgatt gtaggtgcat ttgcctaccg caaactgatt
      781 ggtcgccatt tgccttgcga t
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: {3' leader} [human parainfluenza virus type 3 PIV3, JS, Genomic
Date: 27 Jan 93 05:52:28 GMT
Distribution: bionet
Checksum: 28909 1

LOCUS       S116038        52 bp    RNA             VRL       16-JAN-1993
DEFINITION  {3' leader} [human parainfluenza virus type 3 PIV3, JS, Genomic
            RNA, 52 nt]
ACCESSION   S46713
KEYWORDS    .
SOURCE      human parainfluenza virus type 3 PIV3 JS
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 52)
  AUTHORS   Stokes,A., Tierney,E.L., Murphy,B.R. and Hall,S.L.
  TITLE     The complete nucleotide sequence of the JS strain of human
            parainfluenza virus type 3: comparison with the Wash/47885/57
            prototype strain.
  JOURNAL   Virus Res. 25, 91-103 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 116038] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 1.
BASE COUNT       14 a      7 c      6 g     25 t
ORIGIN      
        1 tggtttgttc tcttctttga acagaccctt atatttaaat tgaaatttaa tt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus 122SPAP (SIVmnd GB-1 strain, clone
Date: 26 Jan 93 05:51:23 GMT
Distribution: bionet
Checksum: 03664 2

LOCUS       SIV122SPAP    582 bp ss-RNA             VRL       25-JAN-1993
DEFINITION  Simian immunodeficiency virus 122SPAP (SIVmnd GB-1 strain, clone
            pMD122) env gene, partial cds.
ACCESSION   M83148
KEYWORDS    .
SOURCE      Simian immunodeficiency virus RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Sakai,H., Sakuragi,S., Sakuragi,J.-I., Shibata,R. and Adachi,A.
  TITLE     Sequences responsible for efficient replication of simian
            immunodeficiency virus SIVMND in cells of the monocyte/macrophage
            lineage
  JOURNAL   J. Gen. Virol. 73, 2989-2993 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             2..580
                     /gene="env"
                     /partial
                     /codon_start=1
                     /translation="HAMGSMLDTILKPCVKINPYCVKMQCQETEYVSATTAKPTTTPT
                     TTSTVASSTEIYLDVDKNNTEEKVERNHVCKYNITGLCRDCKEEIVTNFRGDDVKCEN
                     NTCYINHCNESVITEDCQKGTFDKMYFRLCAPPGYVMLRCNEKLNNSKLCSNISAVQC
                     TQHLVATVSSFFGFNGTMHKEGELIPIDDKYRG"
BASE COUNT      219 a     77 c    126 g    160 t
ORIGIN      
        1 gcatgctatg ggaagtatgt tagataccat acttaagcca tgtgtaaaga ttaacccata
       61 ttgtgttaag atgcaatgtc aggaaacaga atatgtatca gcaacaacag ctaagcctac
      121 aactacacct actactacat ctacagttgc aagtagtaca gagatttact tagatgtaga
      181 taaaaataat acagaagaaa aggtagagag gaatcatgta tgtaagtata acataacagg
      241 actatgcagg gattgcaagg aagaaatagt aacaaatttt agaggggatg atgtgaaatg
      301 tgaaaataat acttgctata taaatcattg taatgagtca gttataacag aagactgtca
      361 gaaagggact tttgataaga tgtatttcag gttgtgtgct cctccaggat atgtcatgtt
      421 aagatgtaat gagaagttaa ataatagtaa attgtgtagc aatatatcag cagtgcagtg
      481 tactcagcac ttagtagcca cagtaagtag cttttttggc tttaatggaa ctatgcataa
      541 ggaaggagaa ttgataccca tagatgataa atataggggc cc
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Puccinia graminis forma specialis tritici 5.8S ribosomal RNA gene,
Date: 26 Jan 93 05:49:38 GMT
Distribution: bionet
Checksum: 60963 3

LOCUS       PPORGBHAN     426 bp ds-DNA             PLN       25-JAN-1993
DEFINITION  Puccinia graminis forma specialis tritici 5.8S ribosomal RNA gene,
            complete rRNA; 25S ribosomal RNA gene, 5' end rRNA.
ACCESSION   L08708 L08713
KEYWORDS    25S ribosomal RNA; 5.8S ribosomal RNA; internal transcribed spacer.
SOURCE      Puccinia graminis heterokaryon, uredinia DNA.
  ORGANISM  Puccinia graminis
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Urediniomycetes;
            Uredinales; Pucciniaceae.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Zambino,P.J. and Szabo,L.J.
  TITLE     Phylogenetic relationships of selected cereal and grass rusts based
            on rDNA sequence analysis
  JOURNAL   Mycologia (1993) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_RNA        <1..42
                     /citation=[1]
                     /note="internal transcribed spacer 1 of nuclear ribosomal
                     gene; putative"
     rRNA            43..198
                     /product="5.8S ribosomal RNA"
                     /citation=[1]
                     /note="putative"
     misc_RNA        199..409
                     /citation=[1]
                     /note="internal transcribed spacer 2 of nuclear ribosomal
                     gene; putative"
     variation       replace(388,"")
                     /citation=[1]
                     /note="isolates 88CHL3009-1 and 88ESP3021-3 have a; 59KS19
                     ANZ126 and VIB have ''; and 88CHN3029-1 88ETH3096-1 and
                     75WA1781-3-1 have heterogeneity among ribosomal gene
                     repeats for '' vs. a"
     rRNA            410..>426
                     /product="25S ribosomal RNA"
                     /citation=[1]
                     /note="putative"
     variation       replace(411,"")
                     /citation=[1]
                     /note="isolate 59KS19 has t; 88ESP3021-3 and 88CHL3009-1
                     have ''; and 88CHN3029-1 88ETH3096-1 75WA1781-3-1 and
                     ANZ126 have heterogeneity among ribosomal gene repeats for
                     t vs. ''"
BASE COUNT      147 a     69 c     61 g    149 t
ORIGIN      
        1 acacaagttt aaatgaatgt aaccaaacct ttaatttata aataactttt aacaatggat
       61 ctctaggctc tcacatcgat gaagaacaca gtgaaatgtg ataagtaatg tgaattgcag
      121 aattcagtga atcatcgaat ctttgaacgc atcttgcacc ttttggtatt ccaaaaggta
      181 cacctgtttg agtgtcatga aaccctctca ttaaacattt ttttaataat ttgtttattg
      241 gatgttgagt gttgctataa ttatagctca ctttaaatat ataagtcact tttcaaataa
      301 gttggattga cttggtgtaa taattttatc atcacatcaa ggaaagtagt aaaacacttg
      361 ccatcttttt tgtaacaaga gactcctaaa aacccaatat ctattttttt taagacctca
      421 aatcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Streptococcus pyogenes M-like protein gene, partial cds from
Date: 28 Jan 93 05:49:05 GMT
Distribution: bionet
Checksum: 08835 2

LOCUS       STRMLIKEE     243 bp ds-DNA             BCT       27-JAN-1993
DEFINITION  Streptococcus pyogenes M-like protein gene, partial cds from
            ST90/85.
ACCESSION   L05021
KEYWORDS    M-like protein; M-protein.
SOURCE      Streptococcus pyogenes (individual_isolate ST90/85) DNA.
  ORGANISM  Streptococcus pyogenes
            Prokaryotae; Firmicutes; Firmibacteria; Gram-positive cocci;
            Streptococcaceae.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Relf,W.A., Martin,D.R. and Sriprakash,K.S.
  TITLE     Identification of sequence types among the M-nontypeable group A
            streptococi
  JOURNAL   J. Clin. Microbiol. 30, 3190-3194 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..243
                     /partial
                     /product="M-like protein"
                     /codon_start=1
                     /translation="DGERVPKNNRLSKKYSELSEKYGALSEKYGALLDKQGALLDKQE
                     ELEKENEKLDSQVAGLIGVVESDEEEAKRSKNMYETF"
BASE COUNT       92 a     29 c     64 g     58 t
ORIGIN      
        1 gatggtgagc gcgttcctaa gaataatagg ctatcgaaaa aatatagtga gctatcggaa
       61 aaatatggtg cgctatcgga aaaatatggt gcgctattgg ataaacaagg tgcgctattg
      121 gataaacaag aagaattaga aaaggaaaat gaaaagttag attctcaggt tgctggtcta
      181 ataggtgtag ttgagagtga tgaagaagaa gctaagcgct caaagaacat gtacgaaact
      241 ttc
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: S100 alpha=EF-hand calcium-binding protein [human, heart, mRNA, 595
Date: 27 Jan 93 05:52:48 GMT
Distribution: bionet
Checksum: 02374 3

LOCUS       S116493       595 bp    mRNA            PRI       15-JAN-1993
DEFINITION  S100 alpha=EF-hand calcium-binding protein [human, heart, mRNA, 595
            nt]
ACCESSION   S46852 X58079
KEYWORDS    .
SOURCE      human heart
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Engelkamp,D., Schafer,B.W., Erne,P. and Heizmann,C.W.
  TITLE     S100 alpha, CAPL, and CACY: molecular cloning and expression
            analysis of three calcium-binding proteins from human heart.
  JOURNAL   Biochemistry 31, 10258-10264 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 116493] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2a.
FEATURES             Location/Qualifiers
     CDS             114..398
                     /note="EF-hand calcium-binding protein;  For the protein
                     sequence (NCBI gibbsq 116494):  Method: conceptual
                     translation supplied by author.  This sequence comes from
                     Fig. 2a."
                     /product="S100 alpha"
                     /codon_start=1
                     /translation="MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSG
                     FLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWENS"
BASE COUNT      136 a    195 c    150 g    114 t
ORIGIN      
        1 ggactgttga agacaggtct ccacacacag ctccagcagc cacatttgca accttggcca
       61 tctgtccaga acctgctccc acctcaggcc caggccaacc gtgcactgct gcaatgggct
      121 ctgagctgga gacggcgatg gagaccctca tcaacgtgtt ccacgcccac tcgggcaaag
      181 agggggacaa gtacaagctg agcaagaagg agctgaaaga gctgctgcag acggagctct
      241 ctggcttcct ggatgcccag aaggatgtgg atgctgtgga caaggtgatg aaggagctag
      301 acgagaatgg agacggggag gtggacttcc aggagtatgt ggtgcttgtg gctgctctca
      361 cagtggcctg taacaatttc ttctgggaga acagttgagc agacagccac attgggcagc
      421 gcccttcctc tccaccctcc cagacctgcc tcttccccct gcttccacct caccccactt
      481 atccctctcc ataaccccac ccttgcccac cccaccccca cccccaccaa gggcgcaaga
      541 gtagcggtcc aagcctgcaa ctcatctttc attaaaggct tctctctcac cagca
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: {pseudogene} L-gulono-gamma-lactone oxidase homolog [guinea pigs,
Date: 27 Jan 93 05:48:17 GMT
Distribution: bionet
Checksum: 62274 2

LOCUS       M251636S03    122 bp    DNA             ROD       14-JAN-1993
DEFINITION  {pseudogene} L-gulono-gamma-lactone oxidase homolog [guinea pigs,
            Genomic, 122 nt, segment 3 of 10] 
ACCESSION   S47440
KEYWORDS    .
SEGMENT     3 of 10
SOURCE      guinea pigs
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 122)
  AUTHORS   Nishikimi,M., Kawai,T. and Yagi,K.
  TITLE     Guinea pigs possess a highly mutated gene for
            L-gulono-gamma-lactone oxidase, the key enzyme for L-ascorbic acid
            biosynthesis missing in this species.
  JOURNAL   J. Biol. Chem. 267, 21967-21972 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 116809] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 3.
BASE COUNT       28 a     35 c     38 g     21 t
ORIGIN      
        1 ccctggtctc ctgcaggtgg acaagaagaa taagcaggtg acggtggaga ctggcatcct
       61 gctggctgag ctgcactcgc agctggacaa gcacggcctg tccctgtcca agtaagagac
      121 cc
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227
Date: 26 Jan 93 05:53:01 GMT
Distribution: bionet
Checksum: 63924 3

LOCUS       SIV227BD5     378 bp ss-RNA             VRL       25-JAN-1993
DEFINITION  Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227
            clone BD5) gp120 (V1, V2) RNA, partial cds's.
ACCESSION   M92698
KEYWORDS    .
SOURCE      Simian immunodeficiency virus 1 month post infection Blood cDNA to
            genomic RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Almond,N.M., Jenkins,A.R., Slade,A., Heath,A.B., Cranage,M. and
            Kitchin,P.A.
  TITLE     Population sequence analysis of a simian immunodeficiency virus
            (32H re-isolate of SIVmac251): A virus stock used for international
            vaccine studies
  JOURNAL   AIDS Res. Hum. Retroviruses 8, 77-88 (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Almond,N.M., Jenkins,A.R., Heath,A.B., Taffs,F. and Kitchin,P.A.
  TITLE     The genetic evolution of the envelope gene of simian
            immunodeficiency virus in cynomolgus macaques infected with a
            complex virus pool
  JOURNAL   Virology 191, 996-1002 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..148
                     /gene="V1"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CNKSETDKWGLTKSSTTTASTTTTTEAPTPVSEKIDMVNETSSC
                     IAQNN"
     CDS             148..376
                     /gene="V2"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CTGLEQEQMISCKFNMTGLKRDKTKEYNETWYSTDLVCEQGNST
                     DNESRCYMNHCNTSIIQESCDKHYWDTIRFRY"
BASE COUNT      156 a     60 c     74 g     88 t
ORIGIN      
        1 tgcaataaaa gtgagacaga taaatgggga ttaacaaaat catcaacaac aacagcatca
       61 acaacaacaa caacagaagc accaacacca gtatcagaaa aaatagacat ggtcaatgag
      121 actagttctt gtatagctca gaataattgc acaggcttgg aacaagagca aatgataagc
      181 tgtaaattca acatgacagg gttaaaaaga gacaagacaa aggagtacaa tgaaacttgg
      241 tactctacag atttggtttg tgaacaaggg aatagcactg ataatgaaag tagatgctac
      301 atgaatcact gtaacacttc tattatccaa gagtcttgtg acaagcatta ttgggatact
      361 attagattta ggtattgt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rice DNA, partial sequence of RFLP marker.
Date: 22 Jan 93 19:50:25 GMT
Distribution: bionet
Checksum: 15925 2

LOCUS       RIC320GN2     106 bp ds-DNA             PLN       22-JAN-1993
DEFINITION  Rice DNA, partial sequence of RFLP marker.
ACCESSION   D13611
KEYWORDS    RFLP marker; STS sequence;
            restriction fragment length polymorphism; sequence tagged site.
SEGMENT     2 of 2
SOURCE      Oryza sativa (strain Nipponbare, sub_species Japonica) DNA, clone
            GN320.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 106)
  AUTHORS   Minobe,Y.
  TITLE     Nucleotide sequence of sequence tagged site from rice RFLP marker
            probe
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     Submitted (09-NOV-1992) to DDBJ by: Yuzo Minobe Rice Genome
            Research Program National Institute of Agrobiological Resources
            2-1-2 Kannondai Tsukuba, Ibaraki 305 Japan Phone:  0298-38-7441
            Fax:    0298-38-7468.
FEATURES             Location/Qualifiers
     misc_feature    1..106
                     /note="STS (sequence tagged site); laboratory sequence
                     name: GN320B"
BASE COUNT       33 a     23 c     21 g     28 t      1 others
ORIGIN      Chromosome 11.
        1 tttgataaat catatgtagc agaatttanc tgaaacagcc taagcagtga gcaatcctca
       61 cttcctcagt gtgacatggc atggtaccac aaattcagtg ctgcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227
Date: 26 Jan 93 05:52:51 GMT
Distribution: bionet
Checksum: 42740 3

LOCUS       SIV227BD10    378 bp ss-RNA             VRL       25-JAN-1993
DEFINITION  Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227
            clone BD10) gp120 (V1, V2) RNA, partial cds's.
ACCESSION   M92702
KEYWORDS    .
SOURCE      Simian immunodeficiency virus 1 month post infection Blood cDNA to
            genomic RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Almond,N.M., Jenkins,A.R., Slade,A., Heath,A.B., Cranage,M. and
            Kitchin,P.A.
  TITLE     Population sequence analysis of a simian immunodeficiency virus
            (32H re-isolate of SIVmac251): A virus stock used for international
            vaccine studies
  JOURNAL   AIDS Res. Hum. Retroviruses 8, 77-88 (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Almond,N.M., Jenkins,A.R., Heath,A.B., Taffs,F. and Kitchin,P.A.
  TITLE     The genetic evolution of the envelope gene of simian
            immunodeficiency virus in cynomolgus macaques infected with a
            complex virus pool
  JOURNAL   Virology 191, 996-1002 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..148
                     /gene="V1"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CNKSETDKWGLTKSSTTTASTTTTTEAPTPVSEKIDMVNETSSC
                     IAQNN"
     CDS             148..376
                     /gene="V2"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CTGLEQEQMISCKFNMTGLKRDKTKEYNETWYSTDLVCEQGNST
                     DNESRCYMNHCNTSIIQESCDKHYWDTIRFRY"
BASE COUNT      155 a     60 c     75 g     88 t
ORIGIN      
        1 tgcaataaaa gtgagacaga taaatgggga ttaacaaaat catcaacgac aacagcatca
       61 acaacaacaa caacagaagc accaacacca gtatcagaaa aaatagacat ggtcaatgag
      121 actagttctt gtatagctca gaataattgc acaggcttgg aacaagagca aatgataagc
      181 tgtaaattca acatgacagg gttaaaaaga gacaagacaa aggagtacaa tgaaacttgg
      241 tactctacag atttggtttg tgaacaaggg aatagcactg ataatgaaag tagatgctac
      301 atgaatcact gtaacacttc tattatccaa gagtcttgtg acaagcatta ttgggatact
      361 attagattta ggtattgt
//