From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human papilloma virus type 13 DNA
Date: 28 Dec 92 21:31:01 GMT
Distribution: bionet
Checksum: 57464 15

LOCUS       PPHVT13DNA   7880 bp ds-DNA             VRL       01-DEC-1992
DEFINITION  Human papilloma virus type 13 DNA
ACCESSION   X62843
KEYWORDS    genome.
SOURCE      Human papillomavirus type 13 DNA.
  ORGANISM  Human papillomavirus type 13
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae.
REFERENCE   1  (bases 1 to 7880)
  AUTHORS   van Ranst,M., Fuse,A., Fiten,P., Beuken,E., Pfister,H., Burk,R.D.
            and Opdenakker,G.
  TITLE     Human papillomavirus type 13 and pygmy chimpanzee papillomavirus
            type 1: Comparison of the genome organizations
  JOURNAL   Virology 190, 587-596 (1992)
  STANDARD  full automatic
COMMENT     From EMBL    entry HPVT13DNA;  dated 23-OCT-1992.
FEATURES             Location/Qualifiers
     CDS             104..556
                     /gene="E6"
                     /codon_start=1
                     /translation="MESANASTPAKTIDQLCKECNLSMHSLQILCVFCRKTLSTAEVY
                     AFQYKSLYIVWRGQFPFAACACCLEIQGKINQFRHFDFAGFAVTVEEDTKQSILDVLI
                     RCYLCHKPLCEVEKLRHILQKARFIKLNSSWKGRCFHCWSSCMENILP"
     CDS             532..837
                     /gene="E7"
                     /codon_start=1
                     /translation="MHGKYPTLKDIVLELTPDPVGLHCNEQLDSSEDEVDEQATQATQ
                     ATQHSTLLQCYQILTSCSKCCSNVRLVVECTGPDIHDLHDLLLGTLNIVCPLCAPKS"
     CDS             843..2783
                     /gene="E1"
                     /codon_start=1
                     /translation="MAEDTGTNNEGTGCSGWFLVEAVVERTTGQQISDDEDETVEDSG
                     LDMVDFIDDRPITHNSVEAQALLNEQEADAHYAAVQDLKRKYLGSPYVSPLGHVEQSV
                     DCDISPRLDAIKLSRNSKKVKRRLFQSREITDSGYGYSEVEAETQVERNGEPENDCGG
                     GGHGRDKEGEGQVHTEVHTGSQIEEHTGTTRVLELLKCKDVRATLYGKFKDCYGLSFT
                     DLIRPFKSDKTTCGDWVVAAFGIHHSVSEAFEKLMQPLTTYMHIQWLTNAWGMVLLVL
                     IRFKVNKSRCTVARTLATFLNIPEDHMLIEPPKIQSSVAALYWFRTGISNASIVTGET
                     PEWIKRQTIVEHGLADNQFKLTEMVQWAYDNDFCDESEIAFEYAQRGDFDSNARAFLN
                     SNCQAKYVKDCATMCKHYKNAEMKKMSMKQWITYRSKKIEEAGNWKPIVQFLRHQNIE
                     FIPFLSKLKLWLHGTPKKNCIAIVGPPDTGKSCFCMSLIKFLGGTVISYVNSSSHFWL
                     QPLCNAKVALLDDATQSCWVYMDTYMRNLLDGNPMSIDRKHKSLALIKCPPLLVTSNV
                     DITKDDKYKYLYSRVTTLTFPNPFPFDRNGNAVYELSDANWKCFFTRLSASLDIQDSE
                     DEDDGDNSQAFRCVPGTVVRTV"
     CDS             2725..3858
                     /gene="E2"
                     /codon_start=1
                     /translation="METIAKHLDACQEQLLELYEENSNELKKHIQHWKCLRYESVLLH
                     KARQMGLSHIGLQVVPPLTVSQAKGHEAIEMQMTLETLLESEFGMEPWTLQDTSREMW
                     LTPPKRCFKKQGQTVEVKYDCNTDNRMDYVSWTYIYVFDTDKWTKVKGMVDYKGLYYI
                     HGNLKTYYLEFEKEAKKYGETLQWEVCIGSTVICSPASVSSTVQEVSIAGPASYSTTT
                     STQASTAVSCSASEECVQAPPCKRQRGPSRPIGNPQNTQSIVCVTDYDTLDSANNNIN
                     VNHYNNNKGRDNSYCAATPIVQLQGDSNCLKCFRYRLHEKYKDLFLLASSTWHWTAPN
                     NSQKHALVTLTYVNEQQRQDFLKTVKIPPTITHKLGFMSLQLL"
     CDS             3257..3613
                     /gene="E4"
                     /codon_start=1
                     /translation="MGKRYNGKYVLAAQSYVLLHLYLVLYKKYPLLGLLHTPPPPPHR
                     PPPQCPAAPRKNVCKRRLVNDNEDLHVPLETPRTHKALCVSQTTTPWTVQTTTSTLTI
                     TTITKDGTTVTVQLHL"
     CDS             3908..4183
                     /gene="E5"
                     /codon_start=1
                     /translation="MEFIPVDVSTQATSKSLLPLVIALTVCVVSIITILCISEFLVYT
                     NVLVLTLILYVLLWLLLTTPLQFYLLTLSLCFLPALCVHQYILQTQE"
     CDS             4364..5755
                     /gene="L2"
                     /codon_start=1
                     /translation="MAHSRARRRKRASATQLYQTCKASGTCPPDVIPKVEQNTLADKI
                     LKWGSLGVFFGGLGIGTGSGTGGRTGYVPVGSTPRPAISTGPTARPPIVVDTVGPTDP
                     SIVSLVEESAIINSGVPDPLPPVHGGFEITTSQSATPAILDVSVTTQNTTSTSIFRNP
                     VFSEPSITQSQPSIESGAHVFISPSTISPHSTEDIPLDTFIVSSSDSNPASSTPVPAT
                     VARPRLGLYSRALHQVQVTDPAFLSSPQRLITFDNPTYEGEDISLQFAHNTIHEPPDE
                     AFMDIIRLHRPAITSRRGLVRFSRIGQRGSMYTRSGKHIGGRVHFFKDISPISAAAEE
                     IELHPLVAAAQDHSGLFDIYAEPDPDPVAVNTSGSLSSASTPFAQSSLSSAPWGNTTV
                     PLSLPGDIFIQPGPDITFPTAPTVTPYNPVTPALPTGPVFITASGFYLYPTWYFTRKR
                     RKRVSLFFTDVAA"
     CDS             5742..7241
                     /gene="L1"
                     /codon_start=1
                     /translation="MWRPSDNKLYVPPPAPVSKVITTDAYVTRTNIFYHASSSRLLAV
                     GNPYFPIKKQNKTVVPKVSGYQFRVFKVVLPDPNKFALPDTSIFDSTSQRLVWACTGL
                     EVGRGQPLGVGISGHPLLNKYDDVENSASYAANPGQDNRVNVAMDYKQTQLCLVGCAP
                     PLGEHWGQGKQCTGVNVQPGDCPPLELISSVIQDGDMVDTGFGAMNFAELQSNKSDVP
                     LDICTSTCKYPDYLQMAADPYGDRLFFYLRKEQMFARHFFNRAGSVGEQIPAELYVKG
                     SNTLSNSIYYNTPSGSLVSSEAQLFNKPYWLQKAQGHNNGICWGNHLFVTVVDTTRST
                     NMTVCAATTSSLSDTYKATEYKQYMRHVEEFDLQFIFQLCTIKLTAEVMSYIHTMNPT
                     ILEDWNFGLSPPPNGTLEDTYRYVQSQAITCQKPTPDKEKQDPYAGLSFWEVNLKEKF
                     SSELDQYPLGRKFLLQTGVQSRSPIRVGRKRAASTSTATPTTRKKAKRK"
BASE COUNT     2452 a   1480 c   1628 g   2320 t
ORIGIN      
        1 gtttctaaca atcttaagtt taaaaaatag gtgggaccga aaacggtttt aaccgaaaac
       61 ggtgatatat aaaccagccc aaaaattgag caagcggggc ataatggaaa gtgcaaatgc
      121 ctccacgcct gcaaaaacta tagaccagtt gtgcaaggag tgcaaccttt ctatgcacag
      181 cttgcaaatt ctatgcgtgt tctgcaggaa aaccctgtcc acggcagagg tttatgcatt
      241 tcagtataag agtttatata tagtgtggcg aggacagttt ccatttgcgg cttgtgcatg
      301 ctgcttagaa atacaaggaa agattaacca gtttaggcat tttgacttcg cgggatttgc
      361 tgtaacagtt gaagaagaca caaagcagtc aattttggat gtgctaattc gctgctattt
      421 atgccacaaa ccattgtgtg aagtggagaa actaagacat attttgcaga aggcacgatt
      481 tattaaatta aacagcagtt ggaaaggccg ctgttttcat tgctggtcat catgcatgga
      541 aaatatccta ccttaaaaga cattgtttta gagctgactc ctgaccctgt aggtctacat
      601 tgcaatgagc aattagacag ctcagaagac gaggtggacg aacaagccac gcaagccacg
      661 caagccacgc aacatagcac actattacaa tgctaccaaa tactaacgtc ctgtagtaaa
      721 tgttgtagca acgtccggct ggtggtggag tgtacaggac ctgacattca cgacctacac
      781 gacctactgc tgggcacgct gaatatagtg tgccctttgt gtgcaccaaa aagctaacca
      841 cgatggcaga ggatacaggt actaataatg aggggacggg atgctcagga tggtttttag
      901 tagaggctgt agtagaacga acaactgggc aacaaatatc agatgatgag gatgaaacag
      961 tggaagatag tgggttggat atggtggatt tcatagatga cagacctatt acacacaatt
     1021 ccgtggaagc acaggcattg ttaaacgagc aggaggcgga tgctcattat gcggctgtgc
     1081 aggacctaaa acgaaagtat ttaggcagtc catatgttag tcccctagga catgttgaac
     1141 agtcagtgga ctgtgatata agtcctcgat tggacgctat aaaattaagt agaaattcta
     1201 aaaaagtaaa gcgacggctg tttcaatcaa gggaaataac ggacagtgga tatggctatt
     1261 ctgaagtgga agctgaaacg caggtagaga gaaatggcga accggaaaat gattgtgggg
     1321 gtggtggaca cggaagggac aaagaggggg agggacaggt gcacacggaa gtgcacacag
     1381 gcagccagat agaagagcac acagggacca cgcgggtgtt agaactcctt aaatgtaagg
     1441 atgtaagggc tacattgtat ggtaagttta aagactgtta tgggttatca tttacagatt
     1501 taattagacc atttaaaagt gataaaacaa catgtgggga ctgggtggtt gcagcatttg
     1561 gtatacatca tagtgtatca gaggcatttg aaaagttaat gcagccatta acaacatata
     1621 tgcatataca atggcttaca aatgcatggg ggatggtatt gttagtatta ataagattta
     1681 aagtaaataa aagtagatgc acagtggcgc gaacactggc aacctttctt aatattcctg
     1741 aggaccacat gttaattgaa cctcccaaaa tacaaagcag tgtggcagca ttatactggt
     1801 ttagaacagg tatttctaat gctagtatag taactggtga aacaccagaa tggataaaaa
     1861 ggcaaacaat tgtagagcat ggacttgcag ataatcaatt taaattaact gaaatggtgc
     1921 agtgggcata tgataatgat ttttgtgatg aaagcgaaat agcatttgaa tatgcacaac
     1981 gaggagattt tgattcaaat gccagggcat ttttaaatag taattgtcag gcaaaatatg
     2041 taaaagattg tgcaacaatg tgcaagcatt ataaaaatgc agaaatgaaa aaaatgtcta
     2101 tgaaacaatg gataacatat agaagtaaaa aaatagagga agcaggaaat tggaaaccaa
     2161 tagtacaatt tttaaggcat caaaatatag aatttattcc atttttaagt aaattaaaat
     2221 tgtggcttca tggcacgcca aagaaaaact gtattgcaat agtggggcca ccagatacag
     2281 gcaaatcatg tttttgcatg agcttaatta agtttttagg gggcacagta attagttatg
     2341 taaattcaag tagccatttt tggctgcagc cattatgtaa tgcaaaggta gctttgctag
     2401 atgatgcaac gcagtcatgc tgggtatata tggacacata catgagaaat ttattagatg
     2461 gcaatccaat gagcattgat agaaaacata agtctttagc attaataaaa tgtccgccat
     2521 tattagtaac atctaatgta gacattacca aagatgacaa atataaatat ttgtatagta
     2581 gagtaacaac acttacattt ccaaatccat tcccttttga cagaaatggg aatgcagtat
     2641 atgagttgtc tgatgcaaac tggaaatgtt tttttacaag attgtcagca agcctagata
     2701 tacaggactc tgaggacgag gacgatggag acaatagcca agcatttaga tgcgtgccag
     2761 gaacagttgt tagaactgta tgaagaaaat agtaatgaac ttaaaaaaca tatacaacat
     2821 tggaaatgct taaggtacga aagtgtactc ttacacaaag cacgccaaat gggcctaagc
     2881 cacattggat tacaagtggt gccaccattg acagtatcac aagctaaggg acatgaggca
     2941 attgaaatgc aaatgacttt agagacatta ctagagtctg agtttggtat ggaaccatgg
     3001 actttacaag atacaagtcg tgaaatgtgg ctaacacccc caaaacgctg ttttaagaaa
     3061 cagggacaaa ctgtggaagt aaaatatgac tgtaatacag acaatagaat ggattatgtg
     3121 tcgtggacat acatatatgt gtttgacaca gataaatgga caaaggtgaa aggaatggta
     3181 gattataaag ggttgtacta catacatgga aatttgaaaa catattattt agagtttgaa
     3241 aaggaggcta aaaaatatgg ggaaacgtta caatgggaag tatgtattgg cagcacagtc
     3301 atatgttctc ctgcatctgt atctagtact gtacaagaag tatccattgc tgggcctgct
     3361 tcatactcca ccaccacctc cacacaggcc tccaccgcag tgtcctgcag cgcctcggaa
     3421 gaatgtgtgc aagcgccgcc ttgtaaacga caacgaggac cttcacgtcc cattggaaac
     3481 ccccagaaca cacaaagcat tgtgtgtgtc acagactacg acaccctgga cagtgcaaac
     3541 aacaacatca acgttaacca ttacaacaat aacaaaggac gggacaacag ttactgtgca
     3601 gctacaccta tagttcaatt acaaggtgac tctaattgtc taaagtgttt tcgatataga
     3661 ttacatgaaa aatataaaga tttatttttg ttagcatcat ctacatggca ttggaccgcc
     3721 cctaataatt cacaaaaaca tgcactggta accttaacct atgtaaatga acaacaaaga
     3781 caagactttt taaaaactgt aaaaatacct ccaaccataa cacataaact aggttttatg
     3841 tcattgcaat tgttataaca gcatatattg tatgtaaata tttgttgtgt gtgtgtatat
     3901 attgtaaatg gaatttatac ctgtggatgt tagtacacag gcaaccagca agtcattact
     3961 gccacttgta attgcactta cagtgtgtgt agttagcatt ataacaatat tgtgcatatc
     4021 agagttcttg gtgtacacaa acgttttagt actaacatta attttatatg tacttttgtg
     4081 gcttttacta acaactccct tgcaattcta tttactaacc ctgtctcttt gctttcttcc
     4141 tgcgttgtgt gtacaccaat atattttaca aacacaagaa taactataca caatgttaac
     4201 ctgtactttt gatgatggtg acacatggtt gctattatgg ttaattttat catttattgt
     4261 agccattcta gggttactgt tgctgtatat aagaactgga catatgcatt gccagtgctg
     4321 gagtaaataa gtggttttat attttgtgtg tattcattta attatggcac atagtagggc
     4381 tcgcagacgc aaacgcgctt cagctacaca actatatcaa acttgtaagg cttctggaac
     4441 atgtcctcct gatgttatac caaaggttga acaaaacact cttgcagata aaatattaaa
     4501 gtggggcagt ttaggagtat tttttggggg gcttggcatt ggcacaggct ctggtactgg
     4561 cggtaggact ggctatgtac cagtaggatc caccccacgc cctgccatat caactgggcc
     4621 tactgcacgt cctcctattg ttgttgatac tgttgggcct acagaccctt ctattgtatc
     4681 tttggtagag gaatcagcta ttattaattc tggagtacct gaccctttgc ctcccgttca
     4741 tgggggtttt gaaatcacca catctcaatc agccactcca gcaatattgg atgtgtctgt
     4801 tacaacacaa aacactacgt ccacaagtat atttagaaat cctgtttttt cagaaccttc
     4861 tattacacaa tctcaacctt ctattgaaag tggtgcacac gtgtttatat cgccatctac
     4921 tatttcccct cattctacag aagacattcc tttagataca tttattgtat cttcctcaga
     4981 tagtaatcct gcatcaagca cccctgttcc agcaactgtt gcacgtccac gtctaggcct
     5041 ttacagtagg gccttacatc aagtacaggt tactgatcct gcctttttat cgtcgcccca
     5101 acgccttata acctttgata accctacata tgaaggtgaa gatataagtt tgcagtttgc
     5161 acacaatacc attcatgaac cccctgatga ggcatttatg gatattataa gactacatag
     5221 gccagccata acatcacggc gtggtcttgt taggtttagt agaattggtc agagggggtc
     5281 tatgtatact cgaagcggca agcatatagg tggaagggtc catttcttta aggatatttc
     5341 tcctatatct gcagctgcag aagaaataga attacacccc cttgtggctg ctgcacagga
     5401 tcacagtggt ttgtttgata tttatgcaga acctgaccct gaccctgtgg ctgtaaacac
     5461 ctctgggtca ttgtcttctg cctccacacc atttgcacaa tcttctttgt cttccgcccc
     5521 atggggtaat actactgttc ctctttcact accaggtgat atatttatac agcctggtcc
     5581 tgacataaca ttcccaactg cacctacagt aacgccttat aatcctgtta cgcctgcttt
     5641 acctacaggt cctgttttta ttactgcttc tggattttat ttatatccta catggtattt
     5701 tacacgcaaa cgccgtaaac gtgtttcctt gttttttaca gatgtggcgg cctagtgaca
     5761 acaaactata tgtgcctcct cccgcccctg tatcaaaagt aattactacg gatgcctatg
     5821 ttacacgtac caacatattt tatcatgcta gcagttctag actacttgca gtgggaaatc
     5881 cttattttcc tattaagaaa caaaacaaaa ctgttgtccc taaggtatct ggttatcagt
     5941 ttagggtatt taaagttgta ttacctgacc ctaataaatt tgccctgcct gacacatcta
     6001 tatttgactc aactagtcaa cgcttagtgt gggcctgtac aggtttagag gttggtaggg
     6061 gtcaaccctt aggtgttggt attagtggtc atccattatt aaataaatat gatgatgtgg
     6121 aaaattctgc aagttatgct gccaatcctg gtcaggataa tagggttaat gtggccatgg
     6181 actataaaca aacacagtta tgtttagtgg gctgtgcacc tcctttaggt gaacattggg
     6241 gacagggcaa gcaatgtact ggtgtaaatg tacaacctgg agattgccct cctttagaat
     6301 taattagtag tgtaattcag gatggtgaca tggtggatac aggatttgga gccatgaatt
     6361 ttgcggaatt gcaatctaat aaatctgatg tgccactaga catatgcacg tccacatgca
     6421 aatatcctga ctatttacaa atggctgcgg atccttatgg agacagatta tttttttatc
     6481 tgcgaaagga acaaatgttt gcaaggcatt tctttaacag ggcaggctct gttggtgaac
     6541 aaatcccagc agaattatat gttaagggta gtaatacact ttctaatagt atttactata
     6601 atactcccag tggctctctt gtgtcttctg aggcccagtt gtttaataaa ccttattggt
     6661 tacaaaaggc ccagggacac aataatggta tatgttgggg caatcacttg tttgttactg
     6721 tagttgatac tacacgcagt actaacatga ctgtgtgtgc agccactaca tcatctcttt
     6781 cagacacata taaggccaca gaatataaac agtacatgcg acatgtagaa gaatttgatt
     6841 tacaatttat ttttcaattg tgcactatta aattaactgc agaggttatg tcatatattc
     6901 atactatgaa tcctacaatt ctagaagact ggaactttgg gctatctccc cctcctaatg
     6961 gaacattaga agacacatat agatatgtac aatctcaggc cataacgtgt caaaagccta
     7021 cacctgataa agaaaaacag gatccgtatg cgggtcttag tttttgggag gttaatctta
     7081 aggaaaagtt ttctagtgaa ctagatcagt atccccttgg cagaaagttt ttattacaaa
     7141 caggcgttca gtctaggtcc cctattcgtg taggtaggaa acgtgctgca tctacatcta
     7201 ctgccacacc tactacacgt aaaaaagcta aaaggaaata atagtttgtt tatgattgtg
     7261 tatgtatgtc acgtttgttt gtactgtatg tatgttgtgt actgtatgtg taatgttgta
     7321 tgtatgtgca tgttacttat taaagaatgt gtgtgtgtgt ttgtatgcaa taaatctaat
     7381 ctgtggtgtc ctgttccacc ctatgagtaa gtggtatgtt gtgtctcgtg tggtgttttg
     7441 tatactatac tataacatta gtgcaaccat tttgtaactt ttcttacatt ttacgtctcc
     7501 atattaagtg caaccgattt cggttgctat tgtttctgcg accgatttgt tgcagcacgc
     7561 tgtttatata atcttaccta ccgcctgcca aaattatcca ccgcttgcca aaatcaccca
     7621 cacacctggc gttgctaggg cgcggttata tatatttact aaatcttact aatctttcta
     7681 tcactcattt tacctttata acaatacttt tgcttttcaa gtacattttt gtacttacta
     7741 gccaatgcct gaaaggtttt ttggctacca gcactacatt tttgtacagt taatgttaca
     7801 tgtataaaat gagtaaccta aggtcacaca cctgcaaacc ggtatcggtt aaaacacacc
     7861 ctctatagtt ccttataatt
//