From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Potato virus A RNA 3'-terminal for coat protein and polymerase
Date: 29 Jul 92 10:03:39 GMT
Distribution: bionet
Checksum: 47449     4

LOCUS       PVIACOATM    1383 bp ss-RNA             VRL       29-JUL-1992
DEFINITION  Potato virus A RNA 3'-terminal for coat protein and polymerase
ACCESSION   X59985
KEYWORDS    coat protein; nuclear inclusion protein; polymerase.
SOURCE      Potato virus A RNA.
  ORGANISM  Potato virus A
            Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Puurand,Y., Maekinen,K.M., Baumann,M. and Saarma,M.
  TITLE     Nucleotide sequence of the 3'-terminal region of potato virus A RNA
  JOURNAL   Virus Res. 23, 99-105 (1992)
  STANDARD  full automatic
COMMENT     *source: strain=A-ASL; *source: clone_library=cDNA lambda gt11;
            From EMBL    entry PVACOATM;  dated 12-MAY-1992.
FEATURES             Location/Qualifiers
     CDS             <1..1181
                     /note="proteolytically processed to produce atleast 6
                     viral proteins"
                     /product="polyprotein"
                     /codon_start=3
                     /translation="FMSHKAIQCGEILIPKLEEERIVSILEWDRSHEPIHRLEAICAS
                     MVESWGYPELTHEIRRFYAWVLEQSPYNALATTGLAPYIAESALKTLYTNVHPTSTEL
                     EKYSIQFDEQMDEEDDMVYFQAETLDASEALAQKSEGRQKEGESNSGKAVAVKDKDVD
                     LGTAGTHSVPRLKSMTSKLTLPMLKGKSVVNLDHLLSYKPKQVDLSNARATHEQFQNW
                     YDGVMASYELEESSMEIILNGFMVWCIENGTSPDINGVWTMMDNEEQVSYPLKPMLDH
                     AKPSLRQIMRHFSALAEAYIEMRSREKPYMPRYGLQRNLRDQSLARYAFDFYEITATT
                     PIRAKEAHLQMKAAALKNSNTNMFGLDGNVTTSEEDTERHTATDVNRNMHHLLGVKGV
                     "
     mat_peptide     <1..371
                     /function="polymerase"
                     /product="nuclear inclusion protein NIb"
     mat_peptide     372..1178
                     /product="coat protein"
BASE COUNT      449 a    277 c    312 g    345 t
ORIGIN
        1 ggtttatgtc ccataaagcc atccagtgtg gtgaaatact aatcccaaag cttgaggaag
       61 aaagaattgt atctatcttg gagtgggata gatcacatga acccatccat agacttgaag
      121 caatatgtgc atccatggtt gaatcttggg gttatcctga actcacacat gaaataagga
      181 ggttctacgc atgggtattg gagcaaagtc catacaatgc acttgctacc acaggactcg
      241 ctccatacat agctgagtca gcgctgaaaa ctctctacac caatgtacat ccaacaagta
      301 ctgaactgga aaagtactct atccagtttg atgaacaaat ggatgaagaa gatgacatgg
      361 tgtatttcca agccgaaact cttgatgcaa gcgaagcact agcgcagaaa tctgaaggta
      421 ggcagaaaga aggagaaagc aacagtggca aagctgtagc cgtgaaggac aaagatgtcg
      481 atttaggtac tgctgggact cattcagtac cacgcttaaa atcaatgaca tcaaaactga
      541 cactaccaat gctcaaaggt aagagtgtcg ttaacctaga tcacttgcta tcttacaaac
      601 caaagcaagt agacttgtca aatgctagag ccacccacga acaattccaa aactggtatg
      661 atggcgttat ggcaagttat gagttagagg aatcaagcat ggagattatt ctaaatggct
      721 tcatggtatg gtgcattgag aatggaacct ctccagacat taatggagtt tggaccatga
      781 tggataatga ggaacaagtg tcatatccat taaaacccat gcttgaccat gcaaagcctt
      841 ctttaaggca aattatgaga catttcagcg cactcgcaga ggcgtacatt gagatgagaa
      901 gtcgtgagaa accatacatg cccaggtatg gtcttcaacg caacctgaga gatcaaagtt
      961 tggcaaggta tgcttttgat ttctatgaga tcactgcaac cactccgatc agagccaaag
     1021 aggcgcatct gcagatgaaa gcagcagcgc tgaagaattc gaacactaat atgtttggac
     1081 tggacggaaa tgtcacaact tcagaagagg acacagaaag gcacacagca acggatgtta
     1141 atcgcaacat gcatcacctt ttaggcgtga agggggtgta accgaagtgc cgtactatta
     1201 ctaagtaaga gttcctgtta gtatccttgt cttattatta gaatacgttt atctttcaac
     1261 aagtatgatg ttcgtgctct cacctcgcaa cagtgagttt gagtgggaaa taaatactag
     1321 tattctatgg ccttacttgt tatatagacc caccacatag tgagatttta tctcggtgac
     1381 tgg
//