From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Borna disease virus duplicated domain within paramyxovirus and
Date: 21 Aug 92 10:05:46 GMT
Distribution: bionet
Checksum: 17048     3

LOCUS       BDVPOLYMER   1133 bp ss-mRNA            VRL       21-AUG-1992
DEFINITION  Borna disease virus duplicated domain within paramyxovirus and
            rhabdovirus polymerase proteins, complete cds.
ACCESSION   M99375
KEYWORDS    polymerase protein.
SOURCE      Borna disease virus cDNA to mRNA.
  ORGANISM  Borna disease virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Togaviridae.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   McClure,M.A., Thibault,K.J., Hatalski,C.G. and Lipkin,W.I.
  TITLE     Sequence similarity between Borna disease virus p40 and a
            duplicated domain within the paramyxo- and rhabdovirus polymerase
            proteins
  JOURNAL   J. Virol. (1992) In press
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     misc_signal     31..43
                     /standard_name="Kozak consensus sequence (Kozak 1987)"
     CDS             40..1113
                     /codon_start=1
                     /translation="MEDQDLYEPPASLPKLPGKFLQYTVGGSDPHPGTGHEKDIRQNA
                     VALLDQSRRDMFHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKT
                     AKFYGEKTTQRDLTELEISSIFSHCCSLLIGVVIGSSSKIKAGAEQIKKRFKTMMAAL
                     NRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEFMDQIKLVAS
                     YAQMTTYTTIKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEEHADLFPFLGAIRHP
                     DAIKLAPRSFPNLASAAFYWSKKENPTMAGYRASTIQPGASVKETQLARYRRREISRG
                     EDGAELSGEISAIMRMIGVTGLN"
     polyA_site      1133
BASE COUNT      298 a    276 c    290 g    269 t
ORIGIN
        1 ctaaagccca agagacgcct ggttgatgac gccgatgcca tggaggacca agatttatat
       61 gaacccccag cgagcctccc caagctcccc ggaaaattcc tacaatacac cgttgggggg
      121 tctgacccgc atccgggtac agggcatgag aaggatatca ggcagaacgc agtggcattg
      181 ttagaccagt cacggcgcga tatgtttcat acagtaacgc ccagccttgt gtttctatgt
      241 ttgctaatcc caggactgca cgctgcgttt gttcacggag gggtgcctcg tgaatcttac
      301 ctgtcgacgc ctgttacgcg tggggaacag actgtcgtta agactgcaaa gttttacggg
      361 gaaaagacaa cacagcgtga tctcaccgag ctggagatct cctctatatt cagccattgt
      421 tgctcattac taattggggt tgtgatagga tcgtcatcta agattaaagc aggagccgag
      481 cagatcaaga aaaggtttaa aactatgatg gcagccttaa accggccatc ccatggtgag
      541 actgctacac tacttcagat gtttaatcca catgaggcta tagattggat taacggccag
      601 ccctgggtag gctcctttgt gttgtctcta ctaactacag actttgagtc cccaggtaaa
      661 gaattcatgg atcagattaa acttgtcgca agttatgcgc agatgactac gtacactact
      721 ataaaggagt acctcgcaga atgtatggat gctaccctta caatccctgt agttgcatat
      781 gagattcgtg actttttaga agtttcagca aagcttaaag aggaacatgc tgacctgttt
      841 ccgttcctgg gggctattcg gcaccccgac gctatcaagc ttgcgccacg gagctttccc
      901 aatctggctt ctgcagcgtt ttactggagt aagaaggaga atcccacaat ggcgggctac
      961 cgggcctcca ccatccagcc gggcgcgagt gtcaaggaga cccagcttgc ccggtatagg
     1021 cgccgcgaga tatctcgcgg ggaagacggg gcagagctct caggtgagat ctctgccata
     1081 atgagaatga taggtgtgac tggtctaaac tagaaaacaa tgaacaaacc aat
//