From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: D.pseudoobscura rh2 opsin gene
Date: 21 Jul 92 10:04:11 GMT
Distribution: bionet
Checksum: 40955     5

LOCUS       DRORH2OP     1905 bp ds-DNA             INV       21-JUL-1992
DEFINITION  D.pseudoobscura rh2 opsin gene
ACCESSION   X65878
KEYWORDS    Rh2 opsin; opsin gene; photoreceptor; rhodopsin; visual pigment.
SOURCE      Drosophila pseudoobscura DNA.
  ORGANISM  Drosophila pseudoobscura
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
            Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Carulli,J.P. and Hartl,D.L.
  TITLE     Variable rates of evolution among Drosophila opsin genes
  JOURNAL   Genetics (1992) In press
  STANDARD  full automatic
COMMENT     *source: strain=Apple Hill; *source: clone_library=EMBL4; *source:
            chromosome=2;
            See also X65877-81
            From EMBL    entry DPRH2OP;  dated 12-JUN-1992.
FEATURES             Location/Qualifiers
     mRNA            join(1..282,348..1264,1327..1360,1424..1905)
                     /gene="rh2 opsin"
     CDS             join(184..282,348..1264,1327..1360,1424..1519)
                     /gene="rh2 opsin"
                     /codon_start=1
                     /translation="MERSLLPEPPLAMALLGPRFEAQTGGNRSVLDNVLPDMAPLVNP
                     HWSRFAPMDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFL
                     DFCMMASQSPVMIINFYYETWVLGPLWCDIYAACGSLFGCVSIWSMCMIALHRYNVIV
                     KGINGTPMTIKTSIMKIAFIWMMAVFWTIMPLIGWSSYVPEGNLTACSIDYMTRQWNP
                     RSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKKMNVKSLRSSEDCDKS
                     AENKLAKVALTTISLWFMAWTPYLIICYFGLFKIDGLTPLTTIWGATFAKTSAVYNPI
                     VYGISHPNDRLVLKEKCPMCVCGTTDEPKPDAPPSDTETTSEAESKD"
     exon            1..282
                     /number=1
     prim_transcript 1..1905
                     /gene="rh2 opsin"
     intron          283..347
                     /number=1
     exon            348..1264
                     /number=2
     intron          1265..1326
                     /number=2
     exon            1327..1360
                     /number=3
     intron          1361..1423
                     /number=3
     exon            1424..1905
                     /number=4
BASE COUNT      452 a    543 c    461 g    449 t
ORIGIN
        1 attccacccc aatcgatgcc gagcccttga aataaaaatg acttttatct gtcagttgac
       61 agcatttatt agcattaaga ccccatttga tagctagcta attggcttat aaaccagcta
      121 taagttcccc ggcccagccg tggctcagcc acagttcgat gcgcatcgga atcgtgacgg
      181 agcatggagc gcagtctgtt gccagagccg ccattggcca tggcactcct ggggcccaga
      241 ttcgaggccc aaacaggagg caatcgttcc gtgctggaca acgtaagtat gggggggacc
      301 aaggattaca gaagggatat gtgctaatcg caattcatgg ctcgcaggta ctgcccgaca
      361 tggcgcctct ggtcaatccg cactggagtc gcttcgcccc catggatccc acaatgagca
      421 agatcctcgg cctgttcacg ctcgtcattc taatcatctc gtgctgcggc aatggcgtgg
      481 tggtctacat ctttggcggc accaagtcgc tgcgcacgcc cgccaacctg ctcgtcctga
      541 acctggcctt tcttgacttc tgcatgatgg cttcgcagtc gccggtgatg atcatcaatt
      601 tttactacga gacctgggtg ctggggccac tgtggtgcga catttatgcg gcctgcggct
      661 ccctgttcgg ctgtgtgtcc atctggtcca tgtgcatgat cgccttgcat cgctacaacg
      721 tgatcgtgaa gggcatcaac ggcacgccca tgaccatcaa gacgtccatt atgaagattg
      781 cgttcatttg gatgatggcc gtgttctgga cgatcatgcc gctgatcggc tggagcagct
      841 atgtgcccga gggcaacctg actgcctgca gcatcgacta catgacgcga cagtggaatc
      901 cgcgctccta cctcatcacc tactccttgt tcgtctacta cacgccgctc ttcatgatct
      961 gctactccta ctggttcatc atcgccaccg tagccgccca cgagaaggcc atgcgggatc
     1021 aggcgaagaa gatgaatgtc aagtcgctgc gcagctccga ggactgcgac aagagcgccg
     1081 aaaacaagct ggccaaggtt gccctcacga ccatatcgct gtggttcatg gcttggaccc
     1141 cctacctcat catctgctat tttggactct tcaaaatcga cggtctaacc cccctcacca
     1201 ccatctgggg tgccaccttt gccaagacga gcgccgtcta caaccccatc gtgtatggca
     1261 tcaggtgagt ggcgtcggtg tgcccatgtt ggggccagtc taatgcagtt tttaattcgc
     1321 cctcggtcat cccaatgacc gcctggtgct caaggagaag gtaagtcgcc atcaactgcg
     1381 agtgtattca atctccttaa gcgcatcttc cttcgtctgc cagtgtccca tgtgtgtctg
     1441 cggcacgacg gatgagccca agccggatgc gcccccatcc gatacggaaa ccacatccga
     1501 ggcagagtca aaggattgag ctgggggaat atatacgtcg tatacgcctt caaaaggcac
     1561 aaaaatgtcg aaaaaaaaaa cgttaaatgc aaccatcata aaaatgatgt aaaaaatgta
     1621 aaaaaaaaat ggcattaaaa ctgacggaat attgaacttt atgagacaga ggattcccat
     1681 gtcagcagca gtcgcctcat ctgtgtgtcg tcgctcatta cgctcaagtc aaggacagac
     1741 cagcacacca ttcccagtcc cagagctctg atgcagattc atcttcattg acacacattt
     1801 gcagccaaat gtcgcctttg ctatgtgcgg gctttgtctc gtatctaatg attataatta
     1861 cgaaacagct gccacaccca ttccaatatc cctgccaccc attag
//