HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Date: 28 Jul 92 10:06:01 GMT
Distribution: bionet
Checksum: 54596     2

LOCUS       HUMS1B26      216 bp ss-RNA             PRI       28-JUL-1992
DEFINITION  H.sapiens gamma-delta T-cell Vgamma9+ mRNA
ACCESSION   Z11300
KEYWORDS    T-cell; T-cell Vgamma9+.
SOURCE      Homo sapiens RNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   Holroyd,K.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Holroyd,K.J., Maeda,H., Kirby,M. and Crystal,R.G.
  TITLE     Vgamma9+ mRNA sequences from sarcoidosis gamma-delta T-cell lines
            responsive to Mycobacterium tuberculosis in vitro are oligoclonal
            and overlap with Vgamma9+ mRNA sequences from autologous blood...
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_review
COMMENT
            From EMBL    entry HSS1B26;  dated 02-JUL-1992.
FEATURES             Location/Qualifiers
     misc_feature    90
                     /note="N region insertion"
BASE COUNT       73 a     51 c     37 g     55 t
ORIGIN
        1 ataggatacc tgaaacgtct actaccactc tcaccattca caatgtagag aaacaggaca
       61 tagctaccta ctactgtgcc ttgtgggaga aagagttggg caaaaaaatc aaggtatttg
      121 gtcccggaac aaagcttatc attacagata aacaacttga tgcagatgtt tcccccaagc
      181 ccactatttt tcttccttca attgctgaaa caaaac
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human transcobalamin I (TCN1) gene, 5' flank.
Date: 29 Jul 92 10:03:12 GMT
Distribution: bionet
Checksum: 00150     3

LOCUS       HUMTCN1A     1106 bp ds-DNA             PRI       29-JUL-1992
DEFINITION  Human transcobalamin I (TCN1) gene, 5' flank.
ACCESSION   M74722
KEYWORDS    TCN1 gene; transcobalamin I; vitamin B12 binding protein.
SOURCE      Homo sapiens (library: Charon 4A) female placenta DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Johnston,J.J., Yang-Feng,T. and Berliner,N.
  TITLE     Genomic structure and mapping of the chromosomal gene for
            transcobalamin I (TCNI): Comparison to human intrinsic factor
  JOURNAL   Genomics 12, 459-464 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     mRNA            908..>1106
                     /gene="TCN1"
BASE COUNT      307 a    223 c    195 g    381 t
ORIGIN
        1 aattcaattg ttttgatttt tagatcccac aaataagtga gaacatgcaa tgtatgtctt
       61 tctgtgatcc tggcttattt cacttaacat aattatctcc agttccatcc attttgtcac
      121 aactgacagg atttcattct tttatatggc tgaatagtac tccattgtgt atatgtacat
      181 ttgctgtgtt catttatctg ttgatagaca cttagcttgc ttccaaatct tggttattgt
      241 aaacagtgct gcaacaaaca tgggagtgca gatatctctt caatatactg gtcttctttc
      301 ttttgggtat atagccagca gtgggattgc tggatcatat ggtagctcta tgtttagttt
      361 tttgaggaag ctccaaactg ttctccatag tgattgtact aatttacatt cccaccaaca
      421 gtgtacaagg cttccctttt ctctacatcc gtgccagcat ttgttattgc ctgtgttttg
      481 aataaagcca tttttagctg agatgagagg atatctcatt gtagctttga tttccattta
      541 tctgatgatc aatgatgtta agcacctttt caagcacttt ttcatatgcc tgcttcccat
      601 ttggatgtct tcttttactt ccatttttat atgttgtatg tgtttgcatg atcaaatcta
      661 ctttatcagg aaacataaaa cataaagtga aacggaaaaa aaaggaaaga ttataggaaa
      721 cagtcatttg cctaatatat cttcactgca cggaaggcaa ataatagata taaacccgaa
      781 gggtttagga caggagacgg aaaggaaagt tattgcctta ttctccctaa ccacatcctt
      841 caagtcttct tccttattta ttcaccacat ggacaaatac acttgaccac acctcctgac
      901 attgctcaat atttgcttga gtgaaaagag gctgaggcaa cctgaaggag gagctctcat
      961 taccttctgc ccatcactta ataaatagcc agccaattca tcaacattct ggtacactgt
     1021 tggagagatg agacagtcac accagctgcc cctagtgggg ctcttactgt tttcttttat
     1081 tccaagccaa ctatgcgaga tttgtg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 glycoprotein 120 (env) gene,
Date: 22 Jul 92 10:02:23 GMT
Distribution: bionet

LOCUS       HIVZ82R43     234 bp ss-RNA             VRL       22-JUL-1992
DEFINITION  Human immunodeficiency virus type 1 glycoprotein 120 (env) gene,
            hypervariable region V3, from patient 82 (year 5: Z82r43).
ACCESSION   M84286
KEYWORDS    glycoprotein 120; surface envelope glycoprotein.
SOURCE      Human immunodeficiency virus type 1 cDNA to genomic RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   Holmes,E.C., Zhang,L.Q., Simmonds,P., Ludlam,C.A. and
            Leigh-Brown,A.J.
  TITLE     Convergent and divergent sequence evolution in the surface envelope
            glycoprotein of Human immunodeficiency virus type 1 within a single
            infected patient
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 4835-4839 (1992)
  STANDARD  full staff_entry
BASE COUNT      106 a     29 c     44 g     55 t
ORIGIN
        1 ttttacagac aatgctaaaa ccataatagt acagctgaat gaatctgtag taattaattg
       61 tacaagaccc aacaacaata caagaaaagg tatacatata ggaccaggga gtgcatttta
      121 tgcaacagga ggaataatag gagatataag acaagcacat tgtaacatta gtagagcaaa
      181 atggaatgaa actttaaaac agatagttat aaaattaaga gaacaatttg ggaa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Parascaris equorum ribosomal RNA sequence.
Date: 25 Jul 92 10:05:30 GMT
Distribution: bionet
Checksum: 27642     2

LOCUS       PAARRNAB      201 bp ss-rRNA            RNA       25-JUL-1992
DEFINITION  Parascaris equorum ribosomal RNA sequence.
ACCESSION   M90448
KEYWORDS    ribosomal RNA.
SOURCE      Parascaris equorum rRNA.
  ORGANISM  Parascaris equorum
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
            Ascaridida; Ascaridina; Ascaridoidea; Ascarididae.
REFERENCE   1  (bases 1 to 201)
  AUTHORS   Nadler,S.A.
  TITLE     Phylogeny of some Ascaridoid nematodes inferred from comparison of
            18S and 28S sequences
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1
                     /note="Corresponds to Caenorhabditis elegans rRNA position
                     4163"
     rRNA            201
                     /note="Corresponds to Caenorhabditis elegans rRNA position
                     4357"
BASE COUNT       51 a     34 c     44 g     71 t      1 others
ORIGIN
        1 gtgatcgtat gttaacggat gtgaagtgga ccattctttt cgggcgtgga acccktcata
       61 tctttaggca tatcgattat aaaattttaa acgtactcgt ctcgctactt gtgcgtcgcc
      121 ttatgtctac tattgtgatt attgaatatt cgcatgcgaa tatttgtggt caacaatatt
      181 acgatatgag tgatatggac g
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.musculus parvalbumin gene exon 4 3'-part
Date: 28 Jul 92 10:07:27 GMT
Distribution: bionet
Checksum: 17678     2

LOCUS       MUSPVAEX42     32 bp ds-DNA             ROD       28-JUL-1992
DEFINITION  M.musculus parvalbumin gene exon 4 3'-part
ACCESSION   X62832
KEYWORDS    cytosolic calcium binding protein; parvalbumin; pva gene.
SOURCE      Mus musculus DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 32)
  AUTHORS   Schleef,M.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Schleef,M., Zuehlke,C.H., Jockusch,H. and Schoeffl,F.
  TITLE     The structure of the mouse parvalbumin gene
  JOURNAL   Mamm. Genome 3, 217-225 (1992)
  STANDARD  full staff_review
COMMENT     *source: strain=ssp. domesticus, strain=A2G; *source: stage=adult;
            *source: chromosome=15;
            From EMBL    entry MMPVAEX42;  dated 01-JUL-1992.
FEATURES             Location/Qualifiers
     prim_transcript <1..>32
                     /usedin=X62826:pva_transcr
     exon            <1..12
                     /number=4
                     /usedin=X62826:pva_mRNA
                     /usedin=X62827:pva_CDS
                     /note="3'end"
                     /gene="pva"
     intron          13..>32
                     /number=4
                     /note="5'end"
BASE COUNT        7 a      4 c     12 g      9 t
ORIGIN
        1 ttggggttga aggtgagtag ccgtgactct aa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.thermoautotrophicum partial 16S rRNA (part 3)
Date: 25 Jul 92 10:04:05 GMT
Distribution: bionet
Checksum: 19227     2

LOCUS       MBF16SRN3     170 bp ds-DNA             BCT       25-JUL-1992
DEFINITION  M.thermoautotrophicum partial 16S rRNA (part 3)
ACCESSION   X66791
KEYWORDS    16S rRNA; rRNA; rrnA gene.
SOURCE      Methanobacterium thermoautotrophicum DNA.
  ORGANISM  Methanobacterium thermoautotrophicum
            Prokaryotae; Archaeobacteria; Methanobacteriales;
            Methanobacteriaceae.
REFERENCE   1  (bases 1 to 170)
  AUTHORS   Ward,D.M., Weller,R. and Bateson,M.M.
  TITLE     16S rRNA sequences reveal uncultured inhabitants of a well-studied
            thermal community
  JOURNAL   FEMS Microbiol. Rev. 75, 105-116 (1990)
  STANDARD  full automatic
COMMENT     *source: strain=deltaH;
            From EMBL    entry MT16SRN3;  dated 23-JUN-1992.
FEATURES             Location/Qualifiers
     rRNA            <1..>170
                     /gene="16s RNA"
BASE COUNT       37 a     46 c     52 g     33 t      2 others
ORIGIN
        1 gggcwacacg cgggctacaa tggcctggac aatgggttcc gacaccgaaa ggtggaggta
       61 atcccctaaa ccaggtcgta gttcggatcg agggctgtaa cccgccctmg tgaagctgga
      121 atgcgtagta atcgcgtgtc actatcgcgc ggtgaatacg tccctgctcc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.aries rearranged T-cell receptor delta
Date: 25 Jul 92 10:06:07 GMT
Distribution: bionet
Checksum: 55302     3

LOCUS       SHPTCVD116    315 bp ss-RNA             MAM       25-JUL-1992
DEFINITION  O.aries rearranged T-cell receptor delta
ACCESSION   Z12977
KEYWORDS    T-cell receptor; T-cell receptor delta chain.
SOURCE      Ovis aries RNA.
  ORGANISM  Ovis aries
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Artiodactyla; Ruminantia; Pecora; Bovidae.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Hein,W.R.
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Hein,W.R. and Dudler,L.
  TITLE     Divergent evolution of the gamma/delta T cell repertoire :
            extensive diversity and developmentally regulated expression of
            sheep Vd, Vg and Cg genes
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=White Alpine; *source: stage=117 day old fetus;
            *source: cell_type=peripheral lymphocytes; *source:
            is_macronuclear=N; *source: is_proviral=N; *source: is_germline=N;
            From EMBL    entry OATCVD116;  dated 27-JUN-1992.
FEATURES             Location/Qualifiers
     CDS             <1..>315
                     /product="TCR delta"
                     /codon_start=3
                     /translation="LNCRYEVSWSGYMHYLFWYKQLPSGEMTFLIRQESSGPNARNGR
                     YSVNFQRAQNSISLTISALQPEDSAMYFCAVWEIVGVLGYSWDTRHMFFGAGTKLFVE
                     PQ"
     mat_peptide     <1..>315
                     /product="TCR delta"
                     /codon_start=3
     misc_feature    1..311
                     /note="TCR V delta 1.16 +D+J"
BASE COUNT       76 a     77 c     79 g     83 t
ORIGIN
        1 ttctgaactg tcggtatgaa gtaagttgga gtgggtacat gcactacctt ttttggtata
       61 agcagcttcc cagtggagag atgactttcc ttattcgtca ggaatcttct ggcccgaatg
      121 caaggaatgg ccgctactct gtaaactttc agagagcaca gaactccatc agcctcacca
      181 tttcagcctt acagccggaa gactccgcaa tgtacttctg tgcagtctgg gagatagtgg
      241 gagtactggg atactcctgg gacacccggc acatgttttt tggagctggc accaaactct
      301 tcgtggagcc ccaaa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Terranova caballeroi ribosomal RNA sequence.
Date: 25 Jul 92 10:06:50 GMT
Distribution: bionet
Checksum: 45332     2

LOCUS       TEARRNAB      190 bp ss-rRNA            RNA       25-JUL-1992
DEFINITION  Terranova caballeroi ribosomal RNA sequence.
ACCESSION   M90451
KEYWORDS    ribosomal RNA.
SOURCE      Terranova caballeroi rRNA.
  ORGANISM  Terranova caballeroi
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
            Ascaridida; Ascaridina; Ascaridoidea; Anisakidae.
REFERENCE   1  (bases 1 to 190)
  AUTHORS   Nadler,S.A.
  TITLE     Phylogeny of some Ascaridoid nematodes inferred from comparison of
            18S and 28S sequences
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1
                     /note="Corresponds to Caenorhabditis elegans rRNA position
                     4163"
     rRNA            190
                     /note="Corresponds to Caenorhabditis elegans rRNA position
                     4357"
BASE COUNT       39 a     42 c     47 g     53 t      9 others
ORIGIN
        1 tagacttana tccangcgcg cagtnaccat acttcggtgt ggaacccttc acgctctcaa
       61 gcatattnat tgtaaagttt catatntggc gttttcgcta cggtgcgtcg gcttattcga
      121 gccagtgtaa ctncgggttn tgcatncgac tgcgtgtngt tttcaatggc gcgataaaag
      181 cggacaggcg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C.elegans cAMP-dependent protein kinase catalytic subunit C gene,
Date: 24 Jul 92 10:05:34 GMT
Distribution: bionet
Checksum: 55528     2

LOCUS       CELCAPKCC5    222 bp ds-DNA             INV       24-JUL-1992
DEFINITION  C.elegans cAMP-dependent protein kinase catalytic subunit C gene,
            exon 5.
ACCESSION   M37118
KEYWORDS    .
SEGMENT     5 of 7
SOURCE      C.elegans (strain Bristol N2), cDNA to mRNA and DNA, clones
            lambda-CC[2,3,5].
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditida;
            Rhabditina; Rhabditoidea; Rhabditidae.
REFERENCE   1  (bases 1 to 222)
  AUTHORS   Gross,R.E., Bagchi,S., Lu,X. and Rubin,C.S.
  TITLE     Cloning, characterization, and expression of the gene for the
            catalytic subunit of cAMP-dependent protein kinase in
            Caenorhabditis elegans
  JOURNAL   J. Biol. Chem. 265, 6896-6907 (1990)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     prim_transcript <1..>222
                     /note="cAMP-dependent protein kinase catalytic subunit C
                     mRNA and introns"
     intron          <1..8
                     /note="intron D"
     exon            9..217
                     /number=5
                     /product="cAMP-dependent protein kinase catalytic subunit
                     C"
     intron          218..>222
                     /note="intron E"
BASE COUNT       50 a     60 c     44 g     68 t
ORIGIN
        1 tatttcagac aactccaact tgtacatggt gctcgaattc atctcgggag gtgagatgtt
       61 ctcacattta cgccgaatcg gacgtttctc cgagccccac tcgcgtttct acgccgctca
      121 aattgtgctt gcctttgagt accttcactc cttagatctc atctatcgtg atctgaaacc
      181 cgagaacttg cttatcgatt ccactggata tctaaaggta gg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: H.vulgare PsaG mRNA
Date: 21 Jul 92 10:03:49 GMT
Distribution: bionet
Checksum: 34185     3

LOCUS       BLYPSAG       724 bp ds-DNA             PLN       21-JUL-1992
DEFINITION  H.vulgare PsaG mRNA
ACCESSION   X60158
KEYWORDS    Photosystem I; psaG gene.
SOURCE      Hordeum vulgare DNA.
  ORGANISM  Hordeum vulgare
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Okkels,J.J., Nielsen,V.S., Scheller,H.V. and Moller,B.L.
  TITLE     A cDNA clone from barley encoding the precursor for the photosystem
            I polypeptide PSI-G: Sequence similarity to PSI-K
  JOURNAL   Plant Mol. Biol. 18, 989-994 (1992)
  STANDARD  full automatic
COMMENT     *source: stage=seedling; *source: tissue=leaf;
            From EMBL    entry HVPSAG;  dated 12-JUN-1992.
FEATURES             Location/Qualifiers
     5'UTR           1..131
     transit_peptide 132..263
     CDS             132..563
                     /product="photosystem I polypeptidePSI-G precursor"
                     /gene="PsaG"
                     /codon_start=1
                     /translation="MATSTAAVLSPPAVAGLRLAPSPRAAASFRGVSPPARRSVAARA
                     ALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGIL
                     KSNDPVGFNLVDVLAWGSIGHIVAYYILATTSNGYDPPFFG"
     mat_peptide     264..560
BASE COUNT      148 a    235 c    203 g    138 t
ORIGIN
        1 gaattctatg gagaagcatt gttagatttg accaaaaaaa aaaaaaaaaa aaaagatacg
       61 aactcgccgc gcttggtccc tgagcaccca cccacccaca cagctccagc tccgaaggag
      121 gagtgaggac catggccacc tccaccgccg ccgtgctgtc cccgcccgcc gtggccgggc
      181 tccgcctagc gccgtccccg cgcgcggcgg cctcgttccg gggggtctca ccgccggcgc
      241 ggcggtccgt ggcggcgcgg gccgcgctgg agccgtcggt ggtgatcagc ctcagcacgg
      301 ggctgtcgct cgtgatgggc cgcttcgtct tcttcaactt ccagcgggag aacgtggcga
      361 agcaggtccc cgagcagaac ggcaagaccc acttcgaggc cggcgacgag cgcgccaagg
      421 agttcgccgg gatcctcaag tccaacgacc ccgtcggctt caacctcgtc gacgtcctag
      481 catggggctc catcggccac atcgtcgcct actacatcct cgccaccacc agcaacggat
      541 acgaccctcc cttcttcggc tgatccgtcc gtctcccctg cctgcctgcg tgccggccgg
      601 atcggctttg ctgttgtaat ccgccgtgtt ttcattagtt ctgtatacgc tgatgatgta
      661 ccatcatgag tatgtatgta tgtatgtgaa atggtgaaag attgatctgg aaaaaaaaaa
      721 aaaa
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.musculus rearranged TCR delta gene V-region, D-delta-2 region &
Date: 25 Jul 92 10:04:59 GMT
Distribution: bionet
Checksum: 38440     2

LOCUS       MUSTCRVDJ1    288 bp ds-DNA             ROD       25-JUL-1992
DEFINITION  M.musculus rearranged TCR delta gene V-region, D-delta-2 region &
            J-delta-1 regions (clone M2)
ACCESSION   X63935
KEYWORDS    D-region; J-region; T cell receptor; V-region; antigen receptor;
            delta gene.
SOURCE      Mus musculus DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 288)
  AUTHORS   Chien,Y.H., Iwashima,M., Wettstein,D.A., Kaplan,K.B., Elliott,J.F.,
            Born,W. and Davis,M.M.
  TITLE     T-cell receptor delta gene rearrangements in early thymocytes
  JOURNAL   Nature 330, 24-31 (1987)
  STANDARD  full automatic
COMMENT     *source: stage=18-19 day fetus; *source: cell_type=thymocytes;
            *source: clone=M2;
            See also X63933-9 & X64900-3
            From EMBL    entry MMTCRVDJ1;  dated 25-JUN-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..240
                     /note="V region"
     misc_feature    241..250
                     /note="D delta 2 region"
     misc_feature    251..288
                     /note="J delta 1 region"
BASE COUNT      100 a     53 c     65 g     70 t
ORIGIN
        1 ggatcctgcc tccttctact gcactgtaac aggaggggac atgaagaatt atcatatgag
       61 ctggtataag aagaatggaa ctaatgctct gtttttagta tacaagctaa atagcaattc
      121 tactgatggt ggaaagagca acctcaaagg gaaaattaac atttcaaaaa atcagtttat
      181 actcgacatt cagaaggcaa caatgaaaga cgctggtacg tactactgtg ggtcagatat
      241 gggatacgag ccgacaaact cgtctttgga caaggaaccc aagtgact
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Halobacterium volcanii Glu-tRNA-2.
Date: 21 Jul 92 10:04:37 GMT
Distribution: bionet
Checksum: 19229     3

LOCUS       HALTRE2        78 bp ss-tRNA            RNA       21-JUL-1992
DEFINITION  Halobacterium volcanii Glu-tRNA-2.
ACCESSION   K02510
KEYWORDS    transfer RNA; transfer RNA-Glu.
SOURCE      Halobacterium volcanii, strain DS2 (NCMB 2012; ATCC 29605) tRNA.
  ORGANISM  Halobacterium volcanii
            Prokaryotae; Archaeobacteria; Halobacteriales; Halobacteriaceae.
REFERENCE   1  (bases 1 to 78)
  AUTHORS   Gupta,R.
  TITLE     Halobacterium volcanii tRNAs: Identification of 41 tRNAs covering
            all amino acids, and the sequences of 33 class I tRNAs
  JOURNAL   J. Biol. Chem. 259, 9461-9471 (1984)
  STANDARD  full staff_review
COMMENT     A total of 41 tRNAs, at least one for each AA, were identified.
            The sequences of the 33 class I tRNAs, representing 18 AAs, are
            presented in [1]. As in eukaryotes, only Leu and Ser tRNAs are
            class II tRNAs (large extra arm).
            The archaebacterial tRNAs follow general tRNA patterns, but have
            certain characteristics so far not reported for other tRNAs: all
            have 'cm' at position 55; 'm1i' at position 56; 'm22g' at position
            10; 'm1f' at position 53; and possibly 'x' at position 15. Only
            archaebacteria modify the residue at position 15.
FEATURES             Location/Qualifiers
     tRNA            1..78
                     /anticodon=(pos:37..39,aa:Glu)
                     /note="Glu-tRNA-2"
     modified_base   10
                     /note="m22g"
     modified_base   13
                     /note="p"
     modified_base   40
                     /note="m1g"
     modified_base   51
                     /note="m5c (partially)"
     modified_base   56
                     /note="m1f"
     modified_base   57
                     /note="p"
     modified_base   58
                     /note="cm"
     modified_base   59
                     /note="m1i"
BASE COUNT       14 a     24 c     23 g     17 t
ORIGIN      5' end of mature tRNA.
        1 gctcggttgg tgtagtccgg ccaatcatct tggcctttcg agccgaggac cagggttcga
       61 atccctgacc gagcacca
//