From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, clone NH53, partial env, nef.
Date: 29 Dec 92 00:50:34 GMT
Distribution: bionet
Checksum: 22939 4

LOCUS       HIVNH53      1242 bp ss-DNA             VRL       04-DEC-1992
DEFINITION  Human immunodeficiency virus type 1, clone NH53, partial env, nef.
ACCESSION   L07425
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), clone NH53.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Weidt,G., Faisst,A.C., Sauermann,U., Lueke,W., Jentsch,K. and
            Hunsmann,G.
  TITLE     Characterization of a new German HIV-1 isolate: HIV-1NH5
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     Kindly provided prior to publication in computer-readable forArne
            Faisst, Deutsches Primatenzentrum (DPZ), Abteilung fur Virologie
            und Immunologie, Kellnerweg 4, W-3400 Goettingen,Germany.
FEATURES             Location/Qualifiers
     misc_feature    <1..630
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="env"
     CDS             <1..630
                     /pseudo
                     /product="envelope polyprotein"
                     /gene="env"
                     /codon_start=1
                     /note="premature stop condon at beginning of sequence"
     exon            <214..304
                     /number=3
                     /gene="tat"
     exon            <214..488
                     /number=3
                     /product="rev protein"
                     /gene="rev"
     CDS             632..1234
                     /product="nef protein"
                     /codon_start=1
                     /translation="MGGKRSKRSVTGWFTVRERMRRAEPAADGVGAVSRDLEKHGAIT
                     SSNTAANNADVAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKETGGLEGLIF
                     SQKRQEILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVGPDEVENSSLLH
                     PASLHGTEDTEREVLKWRFDSHLAFHHMARELHPEYYKDC"
BASE COUNT      382 a    236 c    337 g    287 t
ORIGIN      
        1 taattgcaaa accaacaaga aaagaatgaa caagaattat tggaattaga taaatgggca
       61 agtttgtgga tttggtttga cataacaaat tggctgtggt atataaaaat attcataatg
      121 atagtaggag gcttggtagg tttaagaata gtttttgctg tactttctat agtgaataga
      181 gttaggcagg gatattcacc attatcgttc cagaccctcc tcccagcccc gaggggaccc
      241 cgacagcccg aaggaatcga agaagaaggt ggagagagag acagagacgg atccggtcca
      301 ttagtgaatg gattcttaga aattatctgg atcgacctgc ggagcctgtg cctcttcagc
      361 taccgccgct tgagagactt actcttgatt gtaacgagga ttgtggaact tctgggacgc
      421 agggggtggg aagccctcaa atattggtgg aatctcctgc agtattggag tcaggaacta
      481 aagagtagtg ctattagctt gttcaacgcc atagctatag cagtagctga ggggactgat
      541 agggttatag aaatattaca aagagcttat agagctattc tccacatacc tacacgaata
      601 agacagggct tggaaagggc tttggtataa aatgggtgga aagcggtcaa aacgtagtgt
      661 gactggatgg tttactgtaa gggaaagaat gagacgagct gagccagcag cagatggggt
      721 gggagcagta tctcgagacc tggaaaaaca tggagcaatc acaagtagca atacagcagc
      781 taacaatgct gatgttgcct ggctagaagc acaagaggag gaagaggtgg gttttccagt
      841 cagacctcag gtacctttaa gaccaatgac ttacaaggca gctgtagatc ttagccactt
      901 tttaaaagaa acggggggac tggaagggct aattttctcc caaaagagac aagaaatcct
      961 tgatctgtgg atctaccaca cacaaggcta tttccctgat tggcagaact acacaccagg
     1021 gccagggatc agatatccac tgacctttgg atggtgcttc aagctagtac cagttgggcc
     1081 agatgaggta gaaaacagca gcctgttaca ccctgcgagc ctgcatggga cagaggacac
     1141 ggagagagaa gtgttaaagt ggaggtttga cagccatcta gcatttcatc acatggcccg
     1201 agagctgcat ccggagtact acaaagactg ctgacaccga gt
//