From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: VP4 [human rotavirus, AU-1, Genomic RNA, 2359 nt]
Date: 6 Nov 92 18:34:56 GMT
Distribution: bionet
Checksum: 00476 6

LOCUS       S110558      2359 bp    RNA             NLM       02-NOV-1992
DEFINITION  VP4 [human rotavirus, AU-1, Genomic RNA, 2359 nt]
ACCESSION   S42279 D10970
KEYWORDS    .
SOURCE      human rotavirus AU-1
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Isegawa,Y., Nakagomi,O., Nakagomi,T. and Ueda,S.
  TITLE     A VP4 sequence highly conserved in human rotavirus strain AU-1 and
            feline rotavirus strain FRV-1.
  JOURNAL   J. Gen. Virol. 73 ( Pt 8), 1939-1946 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 110558.
            This sequence comes from Fig. 1.
FEATURES             Location/Qualifiers
     CDS             10..2337
                     /note="For the protein sequence (NCBI gibbsq 110559):
                     This sequence comes from Fig. 2."
                     /product="VP4"
                     /codon_start=1
                     /translation="MASLIYRQLLSNSYVTNISDEVNEIGTKKTTNVTVNPGPFAQTG
                     YAPVDWGHGELPDSTLVQPTLDGPYQPTSLNLPVDYWMLIAPTREGKVAEGTNTTDRW
                     FACVLVEPNVQNTQRQYVLDGQNVQLQVSNDSSTSWKFILFIKLTPDGTYTQYSTLST
                     PHKLCAWMKRDNRVYWYQGATPNASESYYLTINNDNSNVSSDAEFYLIPQSQTAMCTQ
                     YINNGLPPIQNTRNIVPVNITSRQIKDIRAQINEDIVISKTSLWKEMQYNRDIIIRFK
                     FANSIIKSGGLGYKWSEISFKPMNYQYTYTRDGEEVTAHTTCSVNGVNDFNYNGGTLP
                     TDFAISRFEVIKENSYVYVDYWDDSQAFRNMVYVRSLAANLNDVVCSGGSYSFALPVG
                     NHPVMSGGAVTLTSAGVTLSTQYTDYVSLNSLRFRFRLAVSEPSFSISRTRMSGIYGL
                     PAVNPNNNAEYYEIAGRFSLISLVLTNDDYQTPIANSVTVRQDLERQLGELREEFNSL
                     SQEIAVSQLIDLATLPLDMFSMFSGIKSTVEAVKSMTTNVMKRFKTSSLANAISDLTS
                     NMSEAASSVRLTSVRSVGTVTLPRARVSLQVSDDLRSMQDVSTQVSNVSRNLRLKEFT
                     TQTDTLSFDDISAAVLKTKLDKSTQISQQTMPDIIAESSEKFIPKRSYRIVDEDTAFE
                     TGIDGTFYAYKVDTFNEIPFDMERFNKLVTDSPVLSAIIDFKTLKNLNDNYGITKKQA
                     MELLHSNPKTLKEFINNNNPIIRNRIENLISQCRL"
BASE COUNT      844 a    394 c    461 g    660 t
ORIGIN      
        1 ggctataaaa tggcttcttt aatttataga cagttattat caaactcata tgttacgaac
       61 atctctgacg aagttaacga aattggaact aaaaaaacaa ctaacgttac tgttaatcca
      121 gggccgttcg cacaaacggg gtatgcgcct gttgattggg gacatggtga attgcctgat
      181 tctacattag tgcaaccaac tctcgatggt ccatatcaac ctacttcact caacttacca
      241 gttgattatt ggatgttaat tgcgcctact agagaaggaa aagttgctga aggtacgaat
      301 acgactgaca gatggtttgc ttgtgtgcta gttgaaccaa atgtgcaaaa cacacaaaga
      361 caatacgtat tagatgggca aaatgtccaa ttacaggtct caaacgattc aagtacttcg
      421 tggaaattta tattattcat taaattgacg cctgacggaa cgtacactca atactcaacc
      481 ttgtcaacac cgcataagtt atgcgcgtgg atgaaaagag acaacagagt gtactggtat
      541 caaggagcga cgccgaacgc atcagagagc tattacttga ctataaacaa tgataacagc
      601 aacgtttcaa gtgacgctga attttatttg ataccgcaat cgcagactgc tatgtgtaca
      661 caatatataa ataatggttt accaccaatt cagaatacaa ggaatattgt accagtaaat
      721 attacatcta gacagattaa agacataaga gctcagataa atgaagacat agtaatatcg
      781 aaaacttcat tatggaaaga aatgcaatat aatagagata taatcattag atttaaattt
      841 gctaattcaa taatcaaatc aggtggacta ggttataagt ggtcggaaat atcatttaag
      901 cccatgaact atcaatatac gtacacaaga gatggagaag aagtgacagc acacacaaca
      961 tgttcagtga atggtgtcaa tgattttaat tataatggag gtacgttacc tactgatttt
     1021 gcaatatcga gatttgaggt cataaaggaa aattcttatg tatatgtaga ctattgggat
     1081 gattcacaag catttagaaa tatggtatat gtaaggtcgt tagctgcaaa tttgaatgat
     1141 gtagtatgca gtggaggttc ttacagtttt gcgttacctg taggcaatca tccggtgatg
     1201 agtggtggcg cagtgacctt aacgtctgct ggtgtaacac tatcaaccca gtatacagat
     1261 tatgtatcat taaattcatt gcgattcaga ttcagattgg cggtgagcga accatcattt
     1321 tccatctcgc gaactagaat gagtggcata tacggattac cagctgtaaa tccaaataat
     1381 aacgcagaat attatgagat agctggtaga ttctcactta tatcactagt actaacaaat
     1441 gatgactatc aaacgccaat cgctaattca gttaccgtga ggcaagattt agagagacaa
     1501 ttaggtgagt taagagaaga attcaattcg ttgtcacaag aaatagctgt ttcccaactt
     1561 atagacctag caacactacc gcttgatatg ttctcaatgt tctctggaat aaaatcaacg
     1621 gtagaggcag taaaatctat gactacgaat gtgatgaaaa gatttaaaac atcaagttta
     1681 gcaaacgcca tatctgattt aacaagcaat atgtcggaag cggcatcatc tgtaagattg
     1741 acgtcagtga gatcggttgg cactgttaca ctgccaagag ctagagtttc attgcaagta
     1801 agtgatgact taaggtctat gcaggacgta tcaacacaag tgtcaaacgt gagtagaaat
     1861 ttgagattga aagagttcac gacgcaaact gatactttaa gctttgatga catctctgca
     1921 gctgtattga agacgaaact agacaaatcg acgcaaattt cacaacaaac aatgccagat
     1981 attatagctg agtcatctga aaagtttata ccgaaaagat cgtacagaat agttgatgag
     2041 gataccgcat tcgaaactgg aattgacgga acgttttatg cttacaaagt cgatacattt
     2101 aatgaaattc cgtttgatat ggaacgattt aataaattag taacagactc accagtttta
     2161 tcagcaataa tagactttaa gacgttaaag aacttaaacg ataattatgg aataacaaag
     2221 aaacaagcca tggaactatt acattcaaat ccaaagacat taaaagagtt tataaataat
     2281 aataatccaa taattagaaa tagaattgaa aatttaatat cgcagtgtag gttgtaactg
     2341 tctattttaa gatgtgacc
//