HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: G.sphyrocephala gene for 18S rRNA (partial)
Date: 10 Apr 92 10:04:54 GMT
Distribution: bionet
Checksum: 26264     2

LOCUS       GEH18SRRNR    665 bp ds-DNA             INV       10-APR-1992
DEFINITION  G.sphyrocephala gene for 18S rRNA (partial)
ACCESSION   X65072
KEYWORDS    18S ribosomal RNA; ribosomal RNA.
SOURCE      Geocentrophora sphyrocephala DNA.
  ORGANISM  Geocentrophora sphyrocephala
            Eukaryota; Animalia; Eumetazoa; Platyhelminthes; Turbellaria;
            Lecithoepitheliata; Prorhynchidae.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Kuznedelov,K.D., Timoshkin,O.A. and Kumarev,V.P.
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: tissue=whole organism; *source: isolate=St. Petersburg;
            From EMBL    entry GS18SRRNP;  dated 30-MAR-1992.
FEATURES             Location/Qualifiers
     rRNA            <1..>665
                     /note="5' end"
                     /product="18S ribosomal RNA"
BASE COUNT      181 a    136 c    169 g    179 t
ORIGIN
        1 atgcatgtct aagtacacac cttaacatgg tgagactgcg aaaggctcat taaatcagct
       61 atggtttctt agatcattga acattacttg gataactgtg gtaattctag agctaataca
      121 tgaaacaaag ccttggcctc acggtaaagg cgcatttatt agatcaaaac caaccgactt
      181 cggtcgtagt tttggtgact ctggataact ttgtgcagat cgcatgacct tgctcggcga
      241 cgtatctttc aaatgtctga cctatcaact gtcgacggta ggtgatatgc ctaccatggt
      301 gataacgggt aacggggaat cagggttcga ttccggagag ggagcctgag aaacggctac
      361 cacatctaag gaaggcagca ggcgcgcaaa ttacccaatc ccgacacggg aggtagtgac
      421 gaaaaataac gatgcgggtc ttttatgagg ccccgtaatt ggaatgagta cactttaaat
      481 cctttaacaa ggatcaattg gagggcaagt ctggtgccag cagccgcggt aattccagct
      541 tcaatagcgt atattaaagt tgttgcagtt aaaaagctcg tagttggatc tcaggagttg
      601 agggagtggt tcgccttcat gggtgttact attttctctt cctatctagt cggagtccgt
      661 cttgg
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample LC25, V3 region.
Date: 7 Apr 92 10:04:27 GMT
Distribution: bionet
Checksum: 20091     2

LOCUS       HIVFLQ34      337 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample LC25, V3 region.
ACCESSION   M90954
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), direct PCR
            amplification product of Florida control sample C01 of DNA ID 5272.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
FEATURES             Location/Qualifiers
     CDS             <1..>337
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="VIRSENFTDTAKTIIVQLKDPVEINCTRPNNNTRKSIHIGPGRA
                     FYATGDIIGDIRQAHCNISRAKWNNTLRQIVDICRVQFGNKTIVFNQSSGGDPEIVMH
                     TFNCGGEFFY"
BASE COUNT      137 a     49 c     66 g     85 t
ORIGIN      near the C2-V3 boundary
        1 gtaattagat ctgaaaattt cacggacact gctaaaacca taatagtaca gctgaaagac
       61 cctgtagaaa ttaattgtac aagacccaac aacaatacaa gaaaaagtat acatatagga
      121 ccagggagag cattttatgc aacaggagac ataataggag atataagaca agcacattgt
      181 aatattagta gagcaaaatg gaataacact ttgagacaga tagttgacat atgtagagta
      241 caatttggga ataaaacaat agtctttaat caatcctcag gaggggaccc agaaattgta
      301 atgcatactt ttaattgtgg aggggaattt ttctact
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPF7, V3 region.
Date: 7 Apr 92 10:03:30 GMT
Distribution: bionet
Checksum: 48483     3

LOCUS       HIVFLPF7      306 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPF7, V3 region.
ACCESSION   M90899
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), M13 clone A07 of DNA
            ID 6398.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 clone sequences over the V3
            region obtained by the CDC from patient "F" of a Florida dentist.
            Please note that for this set of sequences, clone numbers from the
            V3 region do not correspond with similar numbers from the V4C3V5
            region.
FEATURES             Location/Qualifiers
     CDS             <1..>306
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="EEVVIRSENFTDNVKTIIVQLNESVQINCTRPNNNTRKSMHIAP
                     GRAFYATGEIIGDIRQAHCNLSSIKWNNTLRQIAKKLTEQFGNKTIVFNQSSGGDPEI
                     "
BASE COUNT      135 a     45 c     57 g     69 t
ORIGIN      near the C2-V3 boundary
        1 gaagaggtag taattagatc tgaaaatttc acggacaatg ttaaaaccat aatagtgcag
       61 ctgaatgaat ctgtacaaat taattgtaca aggcccaaca acaatacaag aaaaagtatg
      121 catatagcac cggggagagc attttatgca acaggagaaa taataggaga tataagacaa
      181 gcacattgta accttagtag cataaaatgg aataacactt taagacagat agctaaaaaa
      241 ttaacagaac aatttggaaa taaaacaata gtctttaatc aatcctcagg aggggaccca
      301 gaaatt
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.musculus DNA for nuclear lamina (clone 12)
Date: 10 Apr 92 10:08:50 GMT
Distribution: bionet
Checksum: 46367     2

LOCUS       MUSNLAM12     249 bp ds-DNA             ROD       10-APR-1992
DEFINITION  M.musculus DNA for nuclear lamina (clone 12)
ACCESSION   X64500
KEYWORDS    nuclear lamina.
SOURCE      Mus musculus DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   Christova,R., Bach,I. and Garcheva-Gargova,Z.
  TITLE     Sequences of DNA fragments contacting the nuclear lamina in vivo
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: clone=12;
            From EMBL    entry MMNLAM12;  dated 19-MAR-1992.
BASE COUNT       80 a     57 c     53 g     58 t      1 others
ORIGIN
        1 acttaagagg cctagatccc ttataaagct agacttggtc atatgtttct gtaaatcttg
       61 gcactccttc naaaaaagac gggaggcaga gaaaaagtga agcctcagaa gctctcacga
      121 gtcgtcaact tggtatatac agctgtgaac aggagatcct gtcccaaaca aggtgaaagg
      181 caaggatcaa tacacaaggc tgtcctctga ccttctggta catacaatgg catgtacata
      241 cctacactc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.musculus DNA for nuclear lamina (clone 11)
Date: 10 Apr 92 10:08:47 GMT
Distribution: bionet
Checksum: 63101     2

LOCUS       MUSNLAM11     258 bp ds-DNA             ROD       10-APR-1992
DEFINITION  M.musculus DNA for nuclear lamina (clone 11)
ACCESSION   X64499
KEYWORDS    nuclear lamina.
SOURCE      Mus musculus DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Christova,R., Bach,I. and Garcheva-Gargova,Z.
  TITLE     Sequences of DNA fragments contacting the nuclear lamina in vivo
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: clone=11;
            From EMBL    entry MMNLAM11;  dated 19-MAR-1992.
BASE COUNT       69 a     76 c     30 g     83 t
ORIGIN
        1 gatttcaaac acccattgcc ctgtctccca tccctgaggt tggaattata gccaaactac
       61 tatgcatacc tgaagcataa gataatgacg ctttcaagta actctcccca ctcctctttc
      121 ttacatatga atcacattat atattgagcc aactccacag catatgcagg aggactttct
      181 ttcccttgcc cgctcatatt tcatttcttc cactttccaa tttccagtta tttttcctcc
      241 ttctagaaca acaagcac
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mus musculus T-cell receptor (TCR) alpha-chain gene, V11.b-J33
Date: 7 Apr 92 10:06:04 GMT
Distribution: bionet
Checksum: 63085     3

LOCUS       MUSTCRAA      560 bp ds-DNA             ROD       07-APR-1992
DEFINITION  Mus musculus T-cell receptor (TCR) alpha-chain gene, V11.b-J33
            region, exon 1 (3'end), 2 (5'end).
ACCESSION   M87844
KEYWORDS    J-region; T-cell receptor alpha-chain; V-region;
            transmembrane protein.
SOURCE      Mus musculus (strain C57BL/6) DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Kobori,J.A., Hood,L. and Shastri,N.
  TITLE     Structure-function relationship among T-cell receptors specific for
            lysozyme peptides bound to A-b or A-bm-12 molecules
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 2940-2944 (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     CDS             join(1..52,225..560)
                     /product="T cell receptor alpha-chain"
                     /gene="TCR alpha-chain"
                     /codon_start=1
                     /translation="MQRNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCN
                     FSIAATTVQWFLQNPRGSLINLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDS
                     GTYFCAAEDTGNYKYVFGAGTRLKVIA"
                     /partial
     intron          53..224
                     /number=1
                     /gene="TCR alpha-chain"
     exon            225..560
                     /number=2
                     /gene="TCR alpha-chain"
                     /partial
BASE COUNT      136 a    113 c    160 g    151 t
ORIGIN      Chromosome 14
        1 atgcagagga acctgggagc tgtgctgggg attctgtggg tgcagatttg ctgtgagttg
       61 tgctaagttc ctattagaga ttctccagaa atgtcggtgg tggaggggga gaagttgatg
      121 gaaatctcct gtgcactctt cctcatgggt gtctcctggg gtagttgact ggtgtgagtg
      181 aaaatctctc tttgattttg gtttgctttt ctgttttcaa gcaggggtga gcggagataa
      241 ggtgaaacaa agtccctcag cgctgagtct ccaagaagga accaattctg ctctgagatg
      301 caatttttct atcgccgcga caactgtgca gtggttccta cagaatccca ggggcagcct
      361 catcaatctt ttttacctgg ttccaggaac aaaggagaat gggaggttaa agtcagcatt
      421 cgattctaag gagagctaca gcaccctgca catcagggat gcccagctgg aggactcagg
      481 cacttacttc tgtgctgctg aggatacagg aaactacaaa tacgtctttg gagcaggtac
      541 cagactgaag gttatagcac
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: H.sapiens rearranged mRNA for fetal IG heavy chain Vh3, a possible
Date: 10 Apr 92 10:07:03 GMT
Distribution: bionet
Checksum: 06768     3

LOCUS       HUMVH31316    358 bp ss-mRNA            PRI       10-APR-1992
DEFINITION  H.sapiens rearranged mRNA for fetal IG heavy chain Vh3, a possible
            DQ52, an inverted DLR5, DXP'1 and Jh3 (clone FL13-16)
ACCESSION   X62957
KEYWORDS    CDR3 region; Jh element; Vh element; immunoglobulin heavy chain;
            rearranged gene.
SOURCE      Homo sapiens RNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Raaphorst,F.M.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Raaphorst,F.M., Timmers,E., Kenter,M., Van Tol,M.J., Vossen,J. and
            Schuurman,R.K.
  TITLE     Restricted utilization of germ-line Vh3 elements and short diverse
            third complementarity-determining regions (CDR3) in human fetal
            Immunoglobulin heavy chain rearrangements
  JOURNAL   Eur. J. Immunol. 22, 247-251 (1992)
  STANDARD  full staff_review
COMMENT     *source: stage=13 week old foetus; *source: tissue=liver; *source:
            cell_type=B lymphocyte; *source: isolate=Clone FL13-16; *source:
            chromosome=14; *source: is_germline=N;
            For related sequences see X62954-X62972, X53612-3, M37277,
            Schroeder H.W. Jr. et al, Proc.Natl.Acad.Sci.USA, 87:6149(1990) &
            Ichihara y. et al, Eur. J. Immunol. 18:649(1988)
            From EMBL    entry HSVH31316;  dated 23-MAR-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..288
                     /note="Vh element"
     misc_feature    289..313
                     /note="CDR3"
     misc_feature    314..358
                     /note="Jh element"
BASE COUNT       75 a     86 c    116 g     81 t
ORIGIN
        1 gaggtgcagc tgttggagtc tgggggaggc ttggtacagc ctggggggtc cctgagactc
       61 tcctgtgcag cctctggatt cacctttagc agctatgcca tgagctgggt ccgccaggct
      121 ccagggaagg ggctggagtg ggtctcagct attagtggta gtggtggtag cacatactac
      181 gcagactccg tgaagggccg gttcaccatc tccagagaca attccaagaa cacgctgtat
      241 ctgcaaatga acagcctgag agccgaggac acggccgtat attactgtgc agaaagtccg
      301 tggggattcg ggtgcttttg atatctgggg ccaagggaca atggtcaccg tctcttca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, viral sample FLPH2D, V3
Date: 7 Apr 92 10:03:44 GMT
Distribution: bionet
Checksum: 50783     3

LOCUS       HIVFLPH2D     363 bp ss-RNA             VRL       07-APR-1992
DEFINITION  Human immunodeficiency virus type 1, viral sample FLPH2D, V3
            region.
ACCESSION   M90908
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), directly sequenced
            proviral DNA, clone A02 of DNA ID 8564.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Ou,C.Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
            Korber,B.T., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
            Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., Curran,J.W.
            and Jaffe,H.W.
  TITLE     Molecular Epidemiology of HIV Transmission in a Dental Practice
  JOURNAL   Science (1992) In press
  STANDARD  full automatic
COMMENT     Kindly submitted in computer readable form by the CDC (Centers for
            Disease Control), Atlanta, GA.
            The sequence in this entry is one of 6 direct sequences of clones
            over the V3 region obtained by the CDC from patient "H" of a
            Florida dentist.
FEATURES             Location/Qualifiers
     CDS             <1..>363
                     /note="env polyprotein (AA at 1)"
                     /codon_start=1
                     /translation="LAEGEVIIRSENFTDNAKTIIVQLNATINITCERPHNNTRKSIH
                     IGPGRAFFATGDITGDIRQAHCNLSKGDWDNALKQIVTKLGEQFGRNKTIVFKQSSGG
                     DPEIIMHSFNCAGEFSYCN"
BASE COUNT      147 a     53 c     76 g     87 t
ORIGIN
        1 ctagcagaag gagaggtaat aattagatct gaaaatttca cggataatgc taagaccata
       61 atagtacagc tgaatgcaac tataaatatt acttgtgaaa gaccccacaa caatacaaga
      121 aaaagtatac atataggacc agggagggca ttttttgcaa caggagacat aacaggagat
      181 ataagacaag cacattgtaa ccttagtaaa ggagattggg ataacgcttt aaaacagata
      241 gttacaaaat taggagaaca atttgggagg aataaaacaa tagtctttaa gcaatcctca
      301 ggaggggacc cagaaattat aatgcacagt tttaattgtg caggggaatt ttcctactgt
      361 aat
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.sativa random single-copy DNA fragment 10RG241F
Date: 10 Apr 92 10:12:10 GMT
Distribution: bionet
Checksum: 49833     2

LOCUS       RIC10RG24F    166 bp ds-DNA             PLN       10-APR-1992
DEFINITION  O.sativa random single-copy DNA fragment 10RG241F
ACCESSION   X57910
KEYWORDS    PCR amplified.
SOURCE      Oryza sativa DNA.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 166)
  AUTHORS   Williams,M.N., Pande,N., Nair,S., Mohan,M. and Bennett,J.E.
  TITLE     Restriction fragment length polymorphism analysis of polymerase
            chain reaction amplified from mapped loci of rice (oryza
            sativa)genomic DNA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: strain=IR 36; *source: sub_strain=indica;
            Entry x57860-x57923 consist of random single-copy DNA fragments,
            which were isolated and mapped to the twelve haploid chromosomes of
            the rice. Apart from their map location, copy number and DNA
            sequence, very little is known about these loci. Names are encoded
            as follows: 01 RG140 F (chromosome, clone, 'F'orward or 'R'everse
            primer)
            By mistake entry x57866-x57899 are mentioned in Gene 107, 229-240.
            From EMBL    entry OS10RG24F;  dated 25-MAR-1992.
BASE COUNT       44 a     36 c     28 g     58 t
ORIGIN
        1 ctgcagtgat gaactgacca gagtattccc ccattctatt tgtacctggt tatacatcat
       61 acttttctga cctagtgcag tagtaagacc acctcagttt ctgcaatatg tttgattgtt
      121 agtatcattt agtaacacat acctggagtc catgatttat gtacca
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: X.laevis Xlim-3 mRNA for homeobox containing protein (partial)
Date: 10 Apr 92 10:14:36 GMT
Distribution: bionet
Checksum: 06691     2

LOCUS       XELIM3        118 bp ss-mRNA            VRT       10-APR-1992
DEFINITION  X.laevis Xlim-3 mRNA for homeobox containing protein (partial)
ACCESSION   Z11589
KEYWORDS    homeobox protein.
SOURCE      Xenopus laevis RNA.
  ORGANISM  Xenopus laevis
            Eukaryota; Animalia; Chordata; Vertebrata; Amphibia; Lissamphibia;
            Anura; Archeobatrachia; Pipoidea; Pipidae; Xenopodinae.
REFERENCE   1  (bases 1 to 118)
  AUTHORS   Taira,M.
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 118)
  AUTHORS   Taira,M., Jamrich,M., Good,P.J. and Dawid,I.B.
  TITLE     The LIM Domain-containing Homeobox Gene Xlim-1 is Expressed
            Specifically in the Organizer Region of Xenopus Gastrula Embryos
  JOURNAL   Genes Dev. (1992) In press
  STANDARD  full automatic
REFERENCE   3  (bases 1 to 118)
  AUTHORS   Taira,M., Jamrich,M., Good,P.J. and Dawid,I.B.
  TITLE     The LIM domain-containing homeobox gene Xlim-1 is expressed
            specifically in the organizer region of Xenopus gastrula embryos.
  JOURNAL   Genes Dev. 6, 356-366 (1992)
  STANDARD  full automatic
COMMENT
            From EMBL    entry XLIM3;  dated 19-MAR-1992.
FEATURES             Location/Qualifiers
     CDS             <1..>118
                     /note="PCR fragment ofhomeobox from Xlim-3; partial cDNA
                     sequence"
                     /product="homeobox-containingprotein"
                     /gene="Xlim-3"
                     /codon_start=2
                     /translation="TAKQLETLKNAYDNSPKPARHVREQLSSETGLDMRVVQV"
BASE COUNT       35 a     29 c     28 g     26 t
ORIGIN
        1 cactgcaaaa cagttggaaa ctctgaaaaa tgcctatgac aactctccaa aacctgccag
       61 acatgtccga gagcagcttt cctctgagac tggcttggat atgagggtgg tacaggtc
//
From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: E.coli upp gene for uracil phosphoribosyl transferase
Date: 10 Apr 92 10:04:46 GMT
Distribution: bionet
Checksum: 24910     3

LOCUS       ECOUPPUPT    1001 bp ds-DNA             BCT       10-APR-1992
DEFINITION  E.coli upp gene for uracil phosphoribosyl transferase
ACCESSION   X57104
KEYWORDS    upp gene; uracil phosphoribosyltransferase.
SOURCE      Escherichia coli DNA.
  ORGANISM  Escherichia coli
            Prokaryota; Bacteria; Gram-negative facultatively anaerobic rods;
            Enterobacteriaceae.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Anderson,P.S., Smith,J.M. and Mygind,B.
  TITLE     Characterization of the upp gene...
  JOURNAL   Eur. J. Biochem. 204, 51-56 (1992)
  STANDARD  full automatic
COMMENT     *source: strain=K12; *source: clone_library=COLE1 (Clarke-Carbon);
            *source: clone=pLC1-41;
            From EMBL    entry ECUPPUPT;  dated 23-MAR-1992.
FEATURES             Location/Qualifiers
     -35_signal      241..246
     -10_signal      263..268
     prim_transcript 274..>1001
     CDS             311..937
                     /EC_number="2.4.2.9"
                     /product="uracilphosphoribosyltransferase"
                     /gene="upp"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
BASE COUNT      288 a    225 c    255 g    233 t
ORIGIN
        1 cgcgttactt gcggtagaaa aataaaattc ggcgcaattc taacagggaa agcaaacgtt
       61 tgcgagactg ctttacacaa cctttttgca cgtcttttcc ccaggcgcgc ggcgaaagaa
      121 gacttgtgcc agggtaaagg ttagttttcg gatggaataa tcttctttca taaccatctg
      181 aatataaaat aactttatct caaaccgtta tcattttgac taaagtcaac gaaaagaata
      241 ttgccgcctt gaagaaagga ggtataatcc gtcgattttt tttgtggctg cccctcaaag
      301 gagaaagagt atgaagatcg tggaagtcaa acacccactc gtcaaacaca agctgggact
      361 gatgcgtgag caagatatca gcaccaagcg ctttcgcgaa ctcgcttccg aagtgggtag
      421 cctgctgact tacgaagcga ccgccgacct cgaaacggaa aaagtaacta tcgaaggctg
      481 gaacggcccg gtagaaatcg accagatcaa aggtaagaaa attaccgttg tgccaattct
      541 gcgtgcgggt cttggtatga tggacggtgt gctggaaaac gttccgagcg cgcgcatcag
      601 cgttgtcggt atgtaccgta atgaagaaac gctggagccg gtaccgtact tccagaaact
      661 ggtttctaac atcgatgagc gtatggcgct gatcgttgac ccaatgctgg caaccggtgg
      721 ttccgttatc gcgaccatcg acctgctgaa aaaagcgggc tgcagcagca tcaaagttct
      781 ggtgctggta gctgcgccag aaggtatcgc tgcgctggaa aaagcgcacc cggacgtcga
      841 actgtatacc gcatcgattg atcagggact gaacgagcac ggatacatta ttccgggcct
      901 cggcgatgcc ggtgacaaaa tctttggtac gaaataaaga ataaaaataa ttaaagccga
      961 ctttaagagt cggctttttt ttgagtaaag cgcctataca c
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