From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Daphnia pulex 28S rRNA gene, 3' end, 18S gene, 5' end, and external
Date: 31 Dec 92 01:34:12 GMT
Distribution: bionet
Checksum: 18271 11

LOCUS       DAPRRNASPA   5496 bp ds-DNA             INV       17-DEC-1992
DEFINITION  Daphnia pulex 28S rRNA gene, 3' end, 18S gene, 5' end, and external
            transcribed spacer.
ACCESSION   L07948
KEYWORDS    18S ribosomal RNA; 28S ribosomal RNA; external transcribed spacer;
            intergenic spacer; ribosomal RNA; ribosomal RNA spacer.
SOURCE      Daphnia pulex (individual_isolate PA88-57) (library: PA88-57 (EMBL3
            from T. Crease)) Adult DNA.
  ORGANISM  Daphnia pulex
            Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Branchiopoda;
            Diplostraca; Cladocera; Eucladocera; Daphnidae.
REFERENCE   1  (bases 1 to 5496)
  AUTHORS   Crease,T.J.
  TITLE     Nucleotide sequence of the intergenic spacer between the 28S and
            18S rRNA genes of the crustacean, Daphnia pulex
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            <1..516
                     /product="28S ribosomal RNA"
                     /citation=[1]
                     /note="3' end determined by alignment with previously
                     published sequences; putative"
     repeat_unit     983..1309
                     /rpt_type=tandem
                     /citation=[1]
                     /note="intergenic spacer subrepeat; putative"
     promoter        1251..(1262.1265)
                     /citation=[1]
                     /note="putative"
     repeat_unit     1310..1633
                     /rpt_type=tandem
                     /citation=[1]
                     /note="intergenic spacer subrepeat; putative"
     promoter        1573..(1584.1587)
                     /citation=[1]
                     /note="putative"
     repeat_unit     1634..1958
                     /rpt_type=tandem
                     /citation=[1]
                     /note="intergenic spacer subrepeat; putative"
     promoter        1898..(1909.1912)
                     /citation=[1]
                     /note="putative"
     repeat_unit     1959..2155
                     /rpt_type=tandem
                     /citation=[1]
                     /note="intergenic spacer subrepeat; putative"
     promoter        2095..(2106.2109)
                     /citation=[1]
                     /note="putative"
     repeat_unit     2250..2439
                     /rpt_type=tandem
                     /citation=[1]
                     /note="putative"
     repeat_unit     2440..2627
                     /rpt_type=tandem
                     /citation=[1]
                     /note="putative"
     repeat_region   3836..3853
                     /citation=[1]
                     /note="GT dinucleotide repeat; putative"
     promoter        4031..(4040.4044)
                     /citation=[1]
                     /note="putative"
     misc_feature    4036..5315
                     /standard_name="external transcribed spacer"
                     /citation=[1]
                     /note="putative"
     misc_feature    4834..4853
                     /citation=[1]
                     /note="GT dinucleotide repeat; putative"
     rRNA            5316..>5496
                     /product="18S ribosomal RNA"
                     /citation=[1]
                     /note="first nucleotide determined by alignment with
                     previously published sequences; putative"
BASE COUNT     1570 a   1097 c   1431 g   1391 t      7 others
ORIGIN      
        1 taggattgtt cacccaccta cagggaacgt gagctgggtt tagaccgtcg tgagacaggt
       61 tagttttacc ctactgacga ccatagaaga aatgttattg cgatagtaat cctgcgaagt
      121 acgagaggaa ccgcaggttc ggacagttgg ttggcgcact tggtcgagcg gccagtggtg
      181 cgaggctacg tccggatgat tatacctgaa ggcctctgaa ggtagaatcg atgctggagg
      241 aaggcaatga tacgcagcgt cttttgactc gtttcgacgt tttatctggg tggctataac
      301 gagacccgtc tcggttagag attaaaactc gctccatcag cgagggggtt ccggcctttt
      361 cgtttcgttt cggacgaatg cctggtcggc gcttcattct cgagtcccgg ccggggtgtt
      421 gtacacggta gagcagtcca aattcacact gcgatctttt gagactcagc ccttcaaatg
      481 agaccggaag atttgtcttg ccagatgaga caagtccgcg ataaaaaatc tcatatgctt
      541 gcgcggcngc ttgtccaagg caaaggcaaa aaaaaagaag gcagaagtct caatcgttcg
      601 tcagttgtgt attgtggact tgtctttttt tcgagagaga gagagagaaa aaaaaacttt
      661 gaaaaaagtt aaagacacgc gttaaagaca gatataaaaa aaagtagcct gccgtagagc
      721 ggcactcgga atgttttttt ggccgtcaaa tttcatcttc atattgatat tggctcgcat
      781 tttttgcgtg gagaacgaca gacaggaata aaaataagtt ggaaatgaaa aaaatagcaa
      841 attttcaaaa aatgtcaaaa agctgctgag ctttggccga aagatgtgac ttgatatcta
      901 tggaaatgaa gtcgatctga cgggcgaagc gagacagtgt caaaaagttg aaaaataaga
      961 aaaggcgaaa gtcgaaaaaa atgaaacatt tttctaagtc ccgacgacgg ggtagtgacg
     1021 ctgtagccgg gacttggatg aatgaaagcg gctgaaaaag agagaaagag cgaaagaaaa
     1081 aagttggaaa aaatttctaa gtccgaaaaa ttccaagacc ggtttttggt ggtgaccggt
     1141 cgggcaagtt gagagggtcg gtccggcccg ggctctggtg aaagtccggc gaccctctcg
     1201 gaaatgagct tttttcgtac agttactgcc cggaacatcc accactttcc tatataggga
     1261 agaggttgtc gaaaatgaaa attgaaaaat tttctaagtc cgaaaaattg aaaaaatttt
     1321 ctaagtcccg acgatggata gtgaagctat aggcggcact gggacgagca aagacggctg
     1381 aaatagagag aaagagcgaa agaaaaaaag ttggaaaaaa tttctaagtc ctaaaatttc
     1441 caagaccggt ttttggtgga gactggtcgg cagttgagcg ggcggcccgg cctgagctca
     1501 ggtgaatgtc cggcaaaatt tcggaaatca actttttcgt acagttactg cccggaacat
     1561 ccactacttt cctatatagg gaagaggttg tcgaaaaaaa gaaagttgaa aaattttcta
     1621 agtccgaaaa attgaaaaat ttttctaagt cccgacgacg gatagtgaag ctataggcgg
     1681 cactgggacg agcaaagacg gctaaaaatg gcgagaaaga gcgaaagaaa aaagttggaa
     1741 aaaatttcta agtcctaaaa tttccaagac cggtttttgg tggtgaccgg tcggcgngtg
     1801 tgatggtaag ccccgcctga gctctggtga aagcccggca aattttcgga aatcaacttt
     1861 ttggtacagt tactgcccgg aacatccact actttcctat atagggaaga ggttgtcgag
     1921 aaagaaaaag ttgaaaaatt ttctaagtcc gaaaatttcc aagaccggtt tttggtggtg
     1981 accgggcggc agttgagcag ggggcggccc ggcctgagct caggtgaaag tccggcaaaa
     2041 tttcggaaat caactttttc gtacagttac tgcccggaac atccactact ttcctatata
     2101 gggaagaggt tgtcgagaaa gaaaaagttg aaaaattttc taagtccgaa aaattgaaaa
     2161 atttttctaa gtcccgacga cgtggtagtg acgtggtggg cgggacttgg acgtataagg
     2221 gccgatgaaa agaatggaaa tggaaatgaa aatttctcga tttccgacga cggtgtttgg
     2281 caacgactct ctcgcccggc cactggtcgg cgcgagagag gagtgagcga gacccgtcga
     2341 ttcgaaaaga gaagccgtca caccgtcgag gcgtggcggc tctcaagtgg gttggtcggg
     2401 cgtgtcgtga tgactcgcga ccgtaaaaaa ttcccactca aattctccca tttccgacga
     2461 cggtgtttgg caacgactct ctcgtccggc ccctggtcgg cgcgagagag gagtgagcga
     2521 gacccgtcga ttcgaaaaaa agccgtcaca ccgtcgaggc gtggccgctc tcaaatgggt
     2581 tggtcgggcg tgtcgtgatg acttgcgacc gtaaaaaatt cccacttgtc gaacattttc
     2641 taagtcccaa ctttgaaaac gacggttcct gaaagtcggc tggcggttgg atggggcaat
     2701 gtccccgtcc aatcgctaaa aatgagccgg aaaacggaga cataatgcgg cggaacatta
     2761 gtggttttcc ttggtataga agaggtctcg attcctaaac tcggaaaaat tttcagagtc
     2821 ccaaaaattt tcgaagtgtc gaatagtttg gtttctcgaa ttgaaaattt ttttcaaatt
     2881 tgcgacatta cgacaagcag cgattgtaaa gcccggtcca aatttttcaa acgagtctta
     2941 cttcttgtta gtccgcctgg ccgataccaa agaatggccg accgtcgact atggggcgaa
     3001 tagacgggtg aaagaaataa agtcgaagcc ggtggttgga tagatatcga agggaaggcg
     3061 aaagaggcga aaaggaaagc gcgaaatttc tttagtagct tcgacgcaaa aactttggta
     3121 tcgacgggga gctttgtgga atggaacgaa gacgcagaat gggaagttgt ccggttcggc
     3181 gttggttgta gtttcatttc ctccgtggca aagctccttt ccgcccgcca cttcacatga
     3241 ttttagtttc gattccgttc gatcgcgctt gcactgtctt tgtttttttt tcactgcttg
     3301 gatcgcggct ttgctctaac cagtttagcc ccatgcgatc aaaaagtctt aaaaaaaacc
     3361 gttgaacgga gacgaactcg atgagctgtc ggtgtgtgaa atatcattcc ttcggtaaaa
     3421 ccgttttcga aatttccgat ggtcggtata tgtaaaaata tatccgaacc gcgatgtgga
     3481 cgggaattca aacgcccgct tcaccgattg gtgcgacagc tgagaagctc gtcactcgat
     3541 ccaacgactc ttggtcgaaa agttcagaag aggtgcgcgc gtcaaacatt tttttggttt
     3601 cggacgtttc gtttcttcgg cacgtgtggt ttgtctgtgg ccgtctgtga gagaaatcgg
     3661 acgcttgttc tttgttattt taccgtaaca agacaagacg ggaaagattc tttcttccaa
     3721 acttacggca ttataaccat cagcgttgac tgtcagcgac gatacggaag agaaaagaaa
     3781 atggtgcgcg tcttttcact ttttgacacc gtatcaaaaa aatacgtcag cgaaatgtgt
     3841 gtgtgtgtgt gtgagccgag agataaaata aaaagccacc aaacagaacg ctttcaaatt
     3901 atttcgtgcg gcgtgcgcat atttcacatt ttgcgtttga cggaagctcg ttgtgtggaa
     3961 cacagaagtg gagatggacg gagttgaagg ggggcgaaga cggcccggtc ggacaaagtc
     4021 aagagattga tatatacgag agaattgggt ggaagtgatg gcaaatctat aaaattcaaa
     4081 aatcggatga gatgcgagta ccgcaaaatg tggtgtcgac tctgactctc ttttactacg
     4141 aacttccgtt cgatggaaga tatcgagagc tgagctgagc gcccgctgtg tatggctggt
     4201 gtaattacaa acgagttacg gttggagcta tatcgattgt acgtatcccg aacgttcatc
     4261 gaacaagcca gatcaactcg gcgcccggta agatgtacgc tcagttatgg ccatgacaca
     4321 cgaagggaga attcaaacgg ctgtgagtgt acggcccgcc cggagttgtg tgtaggcagt
     4381 gacctctcaa gaaaaaacgt aaaaaatttt tttttgacag tcaccggtct gcgacaagta
     4441 atcagtacga aacttgggtg caatgcaaaa aacatttttg agaatccttg cttgacaaca
     4501 acgaatctaa cacgataaaa aaacgatccc catnggtgta ccgcttgctt ttctcgcgct
     4561 tcgnganatn gcttatncag ctgcccttgg aatatgtttc gtttcgtgca tacttgatct
     4621 cggtcattct tcgggtgaac tcttaaagaa ttgcgcactt ttataggggt agtctggttg
     4681 cttgtctcga cttgaaatga tttgtttttt ccgcccatga ctttctatac gatgcctcta
     4741 tgctggcctc tgaccgcggt tgttccgagt tttctctttc tcttcgaaag tctttgcgga
     4801 aaattctgcc tcgtgtgacc gttgagcggt gaggtgtgtg tgtgtgtgtg tgtcgtgcgg
     4861 ggtgatgcga gagtgtgcct cggcggtgga aaaataaaaa taaaactctg agcccacaaa
     4921 aatttaaaag atgtatgctt gtcagcttag taaagcaggc ttgacttatg agcatacagc
     4981 acgccacata tgaccgtcga aaacgtaata cgggaaaaaa gttgatgaat atatcaagac
     5041 cggtcgaatg aatccgattc actttgggct catagaccgt tgaatggtct ttgactttgg
     5101 aaattgaaat gaaaaaaatc caacaaacgg atcggatcgg tgtttctctt cactgggact
     5161 cgctgtgaca cgccaggcgt tgcgatcaaa aattttagtt tccgaagaaa aagaaaaaaa
     5221 cgaaaaacgt gttgatttgg tgtgtgtttg gtgatgcgtg ggcgaaataa aaacccgcaa
     5281 ctcgccggat gtacatcaaa caaacataca cgaaatacct ggttgatcct gccagtagca
     5341 tatgcttgtc tcaaagatta agccatgcat gtctaagtac aagccgctag acgggcgaaa
     5401 ccgcgaatgg ctcaataaat cagttatggt tccttagatc cactccatcc tacttggata
     5461 actgtggtaa ttctagagct aatacatgca ctcgag
//