From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bombyx mori retrotransposable element Pao long terminal repeat and
Date: 29 Jan 93 05:45:32 GMT
Distribution: bionet
Checksum: 55668 8

LOCUS       BMOPAORTA    4791 bp ds-DNA             INV       28-JAN-1993
DEFINITION  Bombyx mori retrotransposable element Pao long terminal repeat and
            reverse transcriptase gene, complete cds.
ACCESSION   L09635
KEYWORDS    long terminal repeat (LTR); retrotransposable element;
            reverse transcriptase.
SOURCE      Bombyx mori (strain 703) (library: Charon 35 of B. Hibner, W. Burke
            and T. Eickbush) DNA.
  ORGANISM  Bombyx mori
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata;
            Bombycoidea; Bombycidae.
REFERENCE   1  (bases 1 to 4791)
  AUTHORS   Xiong,Y., Burke,W.D. and Eickbush,T.H.
  TITLE     Pao,a retrotransposable element from Bombyx mori with a highly
            divergent reverse transcriptase domain and unusual long terminal
            repeat
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     transposon      1..4791
                     /standard_name="retrotransposable element Pao"
                     /citation=[1]
     LTR             1..629
                     /citation=[1]
     misc_binding    635..653
                     /bound_moiety="tRNA-Tyr"
     CDS             720..4193
                     /product="reverse transcriptase"
                     /codon_start=1
                     /citation=[1]
     LTR             4162..4791
                     /citation=[1]
BASE COUNT     1749 a   1142 c   1039 g    861 t
ORIGIN      
        1 tgtgcaggac gaaatagggt tttttatagt ttaagaaaca aatagattta atttaaccgt
       61 taataagtga ttacgtaata aatgtataat cttaagttat tttatagtca atatgttagt
      121 gtatcagatc agagaatgta aatagaccaa taggaacgat ttgtggagcg ctttcactac
      181 ggtaacatac agatcaaggg acccccgaaa gtggcgcgtc gatagccggt cgcgagatgg
      241 ggtactgaaa taaatataaa aggatggcca tttataggca aaaacagttc tcagtggatc
      301 aagacagaaa cagttcccag cgaatcttcg acaaagaaac atcagcaaga tagaaacagt
      361 tctcagcaga tcatcaagac agaaacagtt cccagtgaat cttcgacaaa gaaacatcag
      421 caagacagaa acagttacca gcagttctcc gatagtacag ttaccaccag tgaatcagct
      481 accagtgaac cagacagtta cctgtgaaac ctcgctacag aagccgaaac ccatcgaaag
      541 aaacagccgt cttctaccag cgcacaaaca gacagcaaaa accattatta cacgactcgg
      601 aaacagccat acagaccggg tcgtgtacat ttcatggtcc attcgagccg gatagaggac
      661 acatttcatt attctttcga gcccggtaga ggatacgttt tgaaaaggaa actggaacaa
      721 tgccgataac gcggtcaaca ggaagaggac ggatcgaaac tgaacagtcg ccgccctcag
      781 aaaccacagc tacaacacag agcatgtgga cagaaacaac cgcgaatacc gtcatgagtc
      841 tggtagcccc cacaacagaa tcatcgtgcg caacagccaa cacggaagcc acgacgaaac
      901 tcgcagagaa acctgggaac tcaaaaacag aggccgtcaa acagtatata gccaaacaga
      961 atgacgtgcc aacaaaacag cgcgccggta cagtcaaaag tgaccggtcg cgaaacagaa
     1021 aagaacagaa gatagccaaa gctagagaag agctcgcccg cctacaggtg gagttagcag
     1081 ccgcccgatt ggccacgctc gaagctggat ctgatgacga aaacagcgaa tcagaataca
     1141 gtaagtcaga actcgacgaa agagtgggca cgtggttgga aacccaaccc acaaaaacgg
     1201 aaaatcacga ccgacataag gaaacaccgg cgggagcctg cgacaaacaa gacttctcag
     1261 atctaaccgc agcaataaca ctcgccgtca aagccgcccg cgaaccaaga tacacagaat
     1321 tgccattctt taatggaaat caccaagatt ggctatcctt tcgtgcagcc tatcacgaga
     1381 cgatgaattc atttacaaaa acagaaaata taaacagact cagaaggaac ctgaaaggaa
     1441 gggcaaagga agccgttgac ggattactta taacgaacgc tgatccgtcc gacgtcataa
     1501 gaagtctaga agcgcgattc ggaagaccgg aaacaatagc cataacggag ttagacacgc
     1561 tacgagcgct gccaagacta acagaaacac caagagacat ttgtatattc tccagtaagg
     1621 tgaccaacgc cgtagctacg cttcgtgcat taaattgcac acattattta tataatccgg
     1681 aaactaccaa aacaatgtta gaaaaactca caccaacact acgttaccga tactacgact
     1741 tcaccgcggt acaaccgaag gaggatccgg atctgattaa atttgaaaaa ttcatgaaaa
     1801 gagaagccga actgtgcagc ccttatgcac agcccgaaca ggcggggcac tactcgcagc
     1861 ccgcacaaca caacagacgc acacagaacg tgcacatagt cagtgagaag ccatcacgag
     1921 ctaaatgtcc ggtatgtagc aacactgaac acaccacaac agactgctac atattcaaga
     1981 aggcagactc aaacacaaga tgggacatcg ctaagaataa acacctgtgt ttccgatgtc
     2041 tacagtataa gaataaaacc cacaactgta aaccgaagac gtgtggcatt aatgattgca
     2101 aatatactca caacaagatg ctacacttcg acagaaaaat tgaaaaaaca gacaacagtg
     2161 acaaggaaac aacagagaac attaattccg cttggaccgg aaaacagaaa cagtcctatt
     2221 tgaaaataat cccagtccaa gtacaaggac cgataggcac ggttgataca tacgcgctgc
     2281 tcgacgatgg atcaacggta acactgatag acgaaatcat ctgcaagaag actggaacaa
     2341 caggaccaat cgatccgtta cacatacagg cgattaacaa cataaaatca acggaaacaa
     2401 ggtcaagaag agtcaacctc acgctcagag gcctcaacag tcgaaaagaa ataatacaag
     2461 cgagaacagt taacgaccta caagtaacag cacaaaaaat accaaaggaa cagatagacg
     2521 agtattcgca cctacaagac atcagtgaca tcatcacgta cgagaacgcg aaacctggaa
     2581 tcctgattgg ccaagacaaa aactacactg gcacatgtta ctagcttcga aagttagacg
     2641 aggcaacagg aatcagccaa tagcgtcact gacacctcta ggctgggtat tgcatggagg
     2701 tcgcactcgt accttaagcc accacattaa atcatgctag cgaaacccag gaagatgata
     2761 aaatagaaaa tctggtaaaa cagtatttcg ctatggatgc gctgtgcatc acaccaagaa
     2821 gaccaaaaac agacccagag gaacaggcgc ttcgcatcct caacagcaat acagtccaca
     2881 caacagatgg aagatacgaa actgctctgc tctggaaaac agataatgtc agtctaccag
     2941 acaactacaa taactcgtta aagcgactga taaatataga aaacaaactc gatcataatc
     3001 cggaactgaa acagaaatac acagaacaga tggaagcact cgttgcgaaa ggctacgccg
     3061 agcccgctcc aaaaacaaaa acagagaaca gaacgtggta tctacctcac ttcgccgtcg
     3121 tgaacccccc gaagccggaa aaactccgag tcgtccacga cgccgccgcc agaacaagag
     3181 gggtagcttt aaatgatatg ctgcttaagg gaccgaacct actccaatca ctgccaggag
     3241 tgataatgcg attcagacag cataatataa cagcaacagc agacatcaaa gagatgttca
     3301 tacaagtaaa attgagacct gaagacaaag acgcgctccg ttatctctgg cgcaaagatc
     3361 agcgagataa caagccccca gaagaaaaca gaatgacctc gttgatcttc ggggcgtcaa
     3421 gttctccttc cacagcaata tatgtaaaga acttgaacgc ccagaaacat gaagccacgc
     3481 acccggaggc ggcagccaca atacagaaca gacattacgt agacgactac ttggacattt
     3541 ttaaaggttt aaaagatgca gtactcgtaa caacagactt tcgtcgaaaa cacgaaagaa
     3601 agccgacctc gaagaccttc tggatcgaca gtgagatagt gttaagatgg acaagaacgg
     3661 aatcacgctc gtacaaacca tacgtcgccc aacgcctgac agctatagaa gacagttcaa
     3721 caataaacga gaggcgatgg ttacccacga agcacaacgt agccgacgac gtgacccgac
     3781 acgtcccaat gtcgtaccag aatgaacata gatggttcag atggacagaa ttcctacgcc
     3841 aacgacagaa ctcctggccg acggaatcgg cgtcagaaac tacagaaccg atgggtgaag
     3901 taaacatagc agctgcagta ccggcgggag cttcatggcc gaggcgtcgc catgaaaagt
     3961 ggaagtgcca gccacgaaat acacgcatgc gagggaaaag tgatagcgac atatccaggt
     4021 cccgacaacg tggggcgcat cgtagacatc agaaccaagg gtggagttct acggagacca
     4081 gtacgaaaac tactgatcct gcccatcgaa gaagaccatc ctgcaccgag aagaatgcga
     4141 ctgactcgca cggcgggagt aatgtgcagg acgaaatagg gttttttata gtttaagaaa
     4201 caaatagatt taatttaacc gttaataagt gattacgtaa taaatgtata atcttaagtt
     4261 attttatagt caatatgtta gtgtatcaga tcagagaatg taaatagacc aataggaacg
     4321 atttgtggag cgctttcact acggtaacat acagatcaag ggacccccga aagtggcgcg
     4381 tcgatagccg gtcgcgagat ggggtactga aataaatata aaaggatggc catttatagg
     4441 caaaaacagt tctcagtgga tcaagacaga aacagttccc agcgaatctt cgacaaagaa
     4501 acatcagcaa gatagaaaca gttctcagca gatcatcaag acagaaacag ttcccagtga
     4561 atcttcgaca aagaaacatc agcaagacag aaacagttac cagcagttct ccgatagtac
     4621 agttaccacc agtgaatcag ctaccagtga accagacagt tacctgtgaa acctcgctac
     4681 agaagccgaa acccatcgaa agaaacagcc gtcttctacc agcgcacaaa cagacagcaa
     4741 aaaccattat tacacgactc ggaaacagcc atacagaccg ggtcgtgtac a
//