From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: slpA=S-layer protein [Thermus thermophilus, HB8, Genomic, 3416 nt]
Date: 27 Jan 93 05:56:18 GMT
Distribution: bionet
Checksum: 39790 7

LOCUS       S118097      3416 bp    DNA             BCT       21-JAN-1993
DEFINITION  slpA=S-layer protein [Thermus thermophilus, HB8, Genomic, 3416 nt]
ACCESSION   S48629 X57333
KEYWORDS    .
SOURCE      Thermus thermophilus HB8
  ORGANISM  Thermus thermophilus
            Unclassified.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Faraldo,M.M., de Pedro,M.A. and Berenguer,J.
  TITLE     Sequence of the S-layer gene of Thermus thermophilus HB8 and
            functionality of its promoter in Escherichia coli.
  JOURNAL   J. Bacteriol. 174, 7458-7462 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 118097] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 1.
FEATURES             Location/Qualifiers
     CDS             517..3270
                     /note="mismatch(201[A->E]).  For the protein sequence
                     (NCBI gibbsq 118098):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 1.
                     Author-given protein sequence is in conflict with the
                     conceptual translation"
                     /gene="slpA"
                     /product="S-layer protein"
                     /codon_start=1
                     /translation="MKKRLVTLLAGLLTVLSMGFGLAQFSDVPAGHWAKEAVEALAAK
                     GIILGFPDGTFRGNENLTRYQAALLIYRLLQQIEEELKTQGTSPTMEALAPEDLEAMI
                     AELKAQPMPEPGMDQAALKDLMDRVEAASIAADTALAQAQQLAERLDALAQDVEGVKG
                     DLAGLRSQVEANADAIQALNELAVLLNQDVLSLQDRVTALAKMVSGGQELPDLEQFAT
                     KEDVAAVQEFAAALRSDLVGLSEKVSKLEGTVGDLSGKVATLQRNAFTISGSLSLNYS
                     VYRAWGPDASAAGPGTANTFDIDRLFSSKFSTGDGNGNGSVGDEADLGKNTEGVTNAT
                     LSVSFSTGKLDAASDPGKLNSYPGLVQFSLRAKLTNPGKYDPSTGAPTYPINLTLDEF
                     SSTLAVAKDQTLSFSFGRSVRSKFTEYVFDNDYNSRGHGFVATYKPGLLGATLTGVYG
                     SKGANNGDFTYFRGARLALSPVEGIALGGSFVQEGLDANQGTTSASFPAPTTVYGVDA
                     SVKLGPVGLAGEYFNSDAAPNANGYYVKADVALGSISVAGNYRNIGAGVTGANMLSGD
                     ATSTLDQGGWGGVDSSGNVINGAPFRSNRQGFGVSASAGLGPITVKGYYDSSTVLANE
                     TITNSYGAFNYSANNQLVAYGGQADLAFGGFTLSGFYRIAQLNGSTTRYILTEKPAEA
                     VYASEYGAKLAHDGASKDALVPKLNFTAAYTQKYDNATSGFTTQDIAVYGSYELALGP
                     LTLKPMGRYHTQDAAAASTSSDYTTVKYGVAASIALDLPFKPSLSGEYYARSTQVTSA
                     NSGSSATGTISESKYAVGLKLGEFLFKNSSVEAKYASYTGSGLNAPILLGVADAASST
                     TSDYLYNNAVSSVGSNRGSVTGWYFTWTYWDLTFAYVEADVNNNGNQTHGQAFKISYT
                     VKF"
BASE COUNT      597 a   1206 c   1045 g    568 t
ORIGIN      
        1 gatcccgcac atatgcgcct caaaaggcca ccgggaaggg gccgagagcc cccaaggggc
       61 acgccttctt cccggtggtt ttcctctgga tacgccctgc ccctcggttg tccgcccctc
      121 gcagggccgg ctttccctcg gggcttttcg caggcgggcg gggcgggcac accccggccg
      181 gcatccgcgg atccctcgat ctttccggcc gaagccggtt atccccttcg cggggtccgc
      241 cacctcgtga gccaatggcc ccctgcgctt cccgccttcc accgacgcgc cttttcggac
      301 cgcctcccac ctccccccgg ggggagtata acagaaacct taaggcccga ccgcttgaca
      361 agggcgcgtg aggtttttac gatagcgccg gatgcgggga aaaagggctc cttttggggg
      421 gttttccccg caccgggcgg acctgggcgg agaggaaacg cggcaactcg cccgtctcgg
      481 gttcccgccc acgaccctta aggaggtgtg aggcatatga agaaaaggct ggtcacactg
      541 ctggcagggc tcttgaccgt cctctccatg gggttcggtc tggcccagtt ctccgacgtg
      601 cccgccgggc actgggccaa ggaggccgtg gaggccctgg cggccaaggg catcatcctg
      661 ggcttcccgg acggcacctt ccggggcaac gagaacctca cccgctacca ggcggccctc
      721 ctcatctacc ggctcttgca gcagattgag gaggagctga agacccaggg cacctccccc
      781 accatggagg ccctggcccc cgaggacctc gaggcgatga tcgccgagct caaggcccag
      841 cccatgcctg agcccggcat ggaccaggcg gcccttaagg acctcatgga ccgggtggag
      901 gccgcctcca tcgccgccga caccgcgctt gcccaggccc agcagctcgc cgagcggctg
      961 gacgccctgg cccaggacgt ggagggcgtg aagggcgacc tggccgggct taggagccag
     1021 gtggaggcca acgccgacgc catccaggcc ctgaacgagc tcgccgtcct cctgaaccag
     1081 gacgtcctct ccctccagga ccgggtcacc gccctggaga agatggtctc cggcggccag
     1141 gagctccccg acctggagca gttcgccacc aaggaggacg tggccgccgt ccaggagttc
     1201 gccgccgccc tgcgctccga cctggtgggc ctctccgaga aggtttccaa gctggagggc
     1261 accgtgggcg acctttctgg gaaggtcgct accctgcagc gcaacgcctt caccatcagc
     1321 gggagcctga gcctcaacta cagcgtgtat cgggcctggg gccccgacgc ctcggctgca
     1381 gggccgggca cggccaacac ttttgacatt gaccgcctct tctccagcaa gttcagcact
     1441 ggggacggga acgggaatgg ctctgtgggc gacgaggccg acctgggcaa gaacacggag
     1501 ggcgtcacca acgccaccct aagcgtcagc ttctccacgg ggaagttgga tgcggcttcc
     1561 gatccgggca agctgaacag ctaccccggc ctggtccagt tcagcctgcg cgcgaagctg
     1621 accaaccccg gcaaatacga ccccagcacg ggtgcgccca cctaccccat caacctcacc
     1681 ctggatgagt tttcctccac gctggcggtg gccaaggacc agaccctctc ctttagcttc
     1741 ggtcggtcgg tgaggtccaa gttcaccgag tacgtctttg acaacgacta caacagccgc
     1801 gggcacggtt tcgtggccac ctacaagccc ggcctcctgg gggccacgct gaccggggtt
     1861 tacgggtcca agggggccaa caatggtgac ttcacgtact tccgcggcgc ccgcctggcc
     1921 ttgagccctg ttgaaggcat cgccttgggt ggctcctttg tccaggaggg cctggacgcc
     1981 aaccaaggga ccacgagtgc ctccttcccc gctcctacca ccgtgtacgg ggtggatgcc
     2041 agcgtgaagc tcggtcctgt gggcctcgcc ggtgagtact tcaattccga tgccgctccc
     2101 aacgcgaacg ggtactacgt gaaggccgac gtggccttgg ggtctatctc cgtggcgggg
     2161 aactaccgga acatcggcgc cggggttacc ggggcgaaca tgctctccgg ggacgccacc
     2221 agcaccctgg accagggcgg ctggggcggc gttgattcca gcggtaacgt catcaacggg
     2281 gcgcccttcc gctctaaccg ccagggcttt ggggtgagcg cttccgcggg gcttggaccc
     2341 atcacggtca agggctacta cgacagctcc acggtccttg ccaacgagac cattaccaac
     2401 tcctacggcg ccttcaacta cagtgcaaac aaccagctcg tggcctacgg cggccaggcg
     2461 gacctcgcct tcggcggctt cacgctgagc ggcttctacc gcatcgccca gctcaatggc
     2521 tccaccaccc gttacatcct caccgagaag cccgcggaag cggtgtacgc cagcgagtac
     2581 ggggccaagc tggcccacga tggggcctct aaggacgctc tggtgcccaa gctcaacttc
     2641 acggccgctt acacccagaa gtacgacaac gccaccagcg gcttcaccac ccaggacatc
     2701 gccgtctacg gttcctacga gctggccctc gggcctctga ccctcaagcc catgggccgg
     2761 taccacaccc aggacgccgc ggcggcgagc acttcttccg actacaccac ggtgaagtac
     2821 ggggtggcgg cttctattgc cctggacctt cccttcaagc ccagcctttc cggggagtac
     2881 tacgcccgct ccacccaggt aacctcggcc aacagtggtt cttccgccac gggcaccatc
     2941 tccgaaagca agtacgctgt ggggctgaag ctgggcgagt tcctcttcaa gaactcctcg
     3001 gtggaagcca agtacgcctc ctacacgggc agcggcctca acgcccccat tctcctgggt
     3061 gtcgctgacg ccgccagctc caccacctcc gactacctct acaacaatgc ggtgagctcg
     3121 gtggggagca accggggcag cgtgaccggg tggtacttca cctggacgta ctgggacctc
     3181 accttcgcct acgtggaagc cgacgtgaac aacaacggca accagaccca cggtcaggcc
     3241 ttcaagatca gctacaccgt aaagttctaa cccctggcgg tcccgccccc gccccctttg
     3301 ggggggcggg gggtttttgt tctccccctt cctttgggga ggagaggggc ccctatactt
     3361 gggtaaggat gacttccgct accgggggcc tgcacctaag ggggaccagc cccggg
//