From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: major capsid protein...UL21=62 kda capsid protein [pseudorabies
Date: 27 Jan 93 05:55:44 GMT
Distribution: bionet
Checksum: 59744 6

LOCUS       S117953      2510 bp    DNA             VRL       14-JAN-1993
DEFINITION  major capsid protein...UL21=62 kda capsid protein [pseudorabies
            virus PRV, Genomic, 3 genes, 2510 nt]
ACCESSION   S48779 M95285
KEYWORDS    .
SOURCE      pseudorabies virus PRV
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   de Wind,N., Wagenaar,F., Pol,J., Kimman,T. and Berns,A.
  TITLE     The pseudorabies virus homology of the herpes simplex virus UL21
            gene product is a capsid protein which is involved in capsid
            maturation.
  JOURNAL   J. Virol. 66, 7096-7103 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 117953] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2.
FEATURES             Location/Qualifiers
     CDS             complement(257..740)
                     /gene="UL20"
     CDS             complement(1..168)
                     /partial
                     /note="Description: major capsid protein"
     CDS             847..2418
                     /note="Description: 62 kda capsid protein;  For the
                     protein sequence (NCBI gibbsq 119481):  Method: conceptual
                     translation supplied by author.  This sequence comes from
                     Fig. 5."
                     /gene="UL21"
                     /codon_start=1
                     /translation="MEFEYQSTIVHQGVLFYVADGGDRAYFVHGGCIVSVHRRSREIG
                     KFGLTLRGNAPGNRVVANYVRTELARLGRAWAAPQGSDDVFVDALGLLLPLTELDLCG
                     RAELDVYDPYLVECMVSLPASALSLTLVHDRQQDRVLELLAEPAIVHPSSGFVYAVNE
                     ACFALVQAYLSELPSSLQVLTEGLFDGIPGVRPPLSGETRPTAVVVKGGRAAPTLSVR
                     PRRYAERALRATVVSDFVQVRYIPATRRIWATRGGSLSLQMLCDLVAGADAILRRAAG
                     ASDDASAAVVEAVSAVAADPFFGTGSTSLTGAQRFALYQFILARWHLPSCYAALEGML
                     DRLDERPGAGAGDDDDGGEGGGGGGHGGSRAASAVAHAVNRVLREATVFGEVMRMLVN
                     AAVVHAPAIADPAGASPPTTKHAREDAATGLELAVMMSDAETNALDADACELVEAAGA
                     RVLDGLYAGRGLVAATAPVGRALRPTSAVCAEAALLTAFGDSPAALRGAQYLFQLFRA
                     RLTRANISIVLNKNR"
BASE COUNT      310 a    909 c    968 g    323 t
ORIGIN      
        1 cagcgagagc gtgctgcagt aggtgccgag cagcgcgtcg aactcggcac cgtagaggtt
       61 gttgtcgtcc gagcggaagc gcttgaagat gtcgaacagc gcgcggtgcg agtgcacctc
      121 gatgttggac aggatctgcc ccgacggcag gatggccggg cgctccatcg tgtggcgacg
      181 accgcgtgcg ggcgcgtgtg cgcggtcgct ggggagcagg ggggagagtg gcgcgggcgc
      241 gccgcggccg ccttttaatg catgatggag cgcgcgtacg cgcgcggcag caggaaggcg
      301 agcgcgtcgc agacgcagtc ggcgccgtac agcgccccgg cgagggcggg cgcgtagtgg
      361 cggcccgcgt ccagggcgac gtacaggaag gccagccgcg ccgccgccag gagccccagc
      421 gccgcctgct gcgccggcga gagcggcatc cggtcccggg ccacgttccg cgccacgagg
      481 acggcgcaga cggccgcgcg cgcgtagaag gccagcgcgg tgaggagcgc cgcgagggtg
      541 gcccgcgagc cgtggagcgc caggacgagg cagcacgcgg gccggagcgc gagcgccagg
      601 gccaggaggc tcaccacgtg cgagctgaag cgcgggcgcg gcgggcgcgc gcccacaaag
      661 gccgagctca gcagcgcgtc gttctccccc gtcagcttcg cgtccgccgc cgcgtccacg
      721 tccgccgccg cgtcctccat ccccgcgccg ccgcgtgtgt gcggcgggag gcgccccccg
      781 gcgggtttaa aggagtggtc gcgccgcctc gctcacccat ttgccgcgcc gcgtgtgccc
      841 gccgccatgg agtttgagta ccagagcacg atcgtgcacc agggggtgct gttctacgtc
      901 gccgacggcg gggaccgcgc gtactttgtg cacgggggct gcatcgtgtc cgtgcaccgg
      961 cgctcgcggg agatcggcaa gttcgggctc acgctgcgcg ggaacgcgcc cgggaaccgc
     1021 gtcgtcgcca actacgtgcg cacggagctg gcgcgcctcg gccgcgcgtg ggccgccccg
     1081 caggggagcg acgacgtctt cgtggacgcc ctggggctgc tgctgccgct gacggagctg
     1141 gacctctgcg gccgcgcgga gctggacgtg tacgacccct acctcgtcga gtgcatggtc
     1201 tcgctgccgg cgtcggcgct ctcgctgacg ctcgtgcacg accgccagca ggaccgcgtc
     1261 ctggagctcc tggccgagcc cgccatcgtg cacccctcct cgggcttcgt gtacgccgtg
     1321 aacgaggcct gcttcgcgct ggtgcaggcg tacctctccg agctgcccag ctcgctgcag
     1381 gtgctgacgg aggggctctt tgacggcatc cccggcgtgc gccccccgct cagcggcgag
     1441 acgcggccca cggccgtggt ggtgaagggc gggcgcgcgg cccctacgct gagcgtgcgc
     1501 ccgcgccggt acgccgagcg cgcgctgcgc gcgacggtgg tcagcgactt tgtgcaggtg
     1561 cgctacatcc cggcgacgcg gcgcatctgg gcgacgcgcg gcgggagcct gtccctgcag
     1621 atgctctgcg acctcgtggc cggggcggac gccatcctgc ggcgggccgc gggcgcctcg
     1681 gacgacgcct cggccgccgt ggtcgaggcc gtgtccgccg tcgcggcgga ccccttcttc
     1741 gggacgggct ccacgtcgct cacgggcgcg cagcggttcg cgctgtacca gttcatcctg
     1801 gcccgctggc acctgccgag ctgctacgcc gcgctggagg gcatgctcga caggctggac
     1861 gagcgccccg gggcgggcgc gggcgacgac gacgacggag gagaaggggg aggagggggc
     1921 ggccacggcg gctctcgggc cgcgagcgcc gtggcccacg ccgtcaaccg cgtgctgcgc
     1981 gaggcgaccg tcttcggcga ggtgatgcgg atgctcgtga acgccgccgt ggtgcacgcc
     2041 cccgcgatcg cggacccggc gggggcctcg ccgccgacga cgaagcacgc ccgggaggac
     2101 gcggcgacgg gcctggagct ggcggtcatg atgagcgacg cggagacgaa cgcgctggac
     2161 gccgacgcgt gcgagctggt ggaggcggcc ggggcgcggg tgctggacgg gctctacgcc
     2221 ggccggggcc tcgtcgccgc gacggcgccc gtggggcgcg cgctgcggcc cacgtccgcc
     2281 gtctgcgccg aggcggcgct cctgaccgcc ttcggcgact cgcccgcggc cctccgcggg
     2341 gcccagtacc tgtttcagct gtttcgggcg cgcctgaccc gcgccaacat ctccatcgtc
     2401 ctcaataaaa accgttaacc aaacaccacg tccgcgcccc cgtccgttct ctgtccgcga
     2461 cacgcacaca cgcgcgcgcc cgcccgcctc ggtctcggtg cccccccgga
//