HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: H.sapiens mRNA for T-cell receptor alpha chain, V-alpha 31 segment
Date: 29 Dec 92 00:55:48 GMT
Distribution: bionet
Checksum: 39573 2

LOCUS       HUM31         344 bp ss-RNA             PRI       04-DEC-1992
DEFINITION  H.sapiens mRNA for T-cell receptor alpha chain, V-alpha 31 segment
ACCESSION   X68697
KEYWORDS    T-cell receptor; TCR gene; V-region; alpha chain.
SOURCE      Homo sapiens RNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Moss,P.A., Rosenberg,W.M., Zintzaras,E. and Bell,J.I.
  TITLE     Characterization of the Human T-cell receptor alpha repertoire and
            demonstration of a genetic influence on V-alpha usage
  JOURNAL   Eur. J. Immunol. (1992) In press
  STANDARD  full automatic
COMMENT     *source: isolate=patient AJ; *source: chromosome=14;
               From EMBL    entry HS31;  dated 03-NOV-1992.
FEATURES             Location/Qualifiers
     CDS             39..>344
                     /note="T-cell receptor alpha chain;  ; V segment"
                     /codon_start=1
                     /translation="MNSSLDFLILILMFGGTSSNSVKQTGQITVSEGASVTMNCTYTS
                     TGYPTLFWYVEYPSKPLQLLQRETMENSKNFGGGNIKDKNSPIVKYSVQVSDSAVYYC
                     "
BASE COUNT      106 a     87 c     72 g     79 t
ORIGIN      
        1 taacagtgat gccctctgct aggccagaga cactaacaat gaactcctct ctggactttc
       61 taattctgat cttaatgttt ggaggaacca gcagcaattc agtcaagcag acgggccaaa
      121 taaccgtctc ggagggagca tctgtgacta tgaactgcac atacacatcc acggggtacc
      181 ctaccctttt ctggtatgtg gaatacccca gcaaacctct gcagcttctt cagagagaga
      241 caatggaaaa cagcaaaaac ttcggaggcg gaaatattaa agacaaaaac tcccccattg
      301 tgaaatattc agtccaggta tcagactcag ccgtgtacta ctgt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1, sample 6004, direct sequence
Date: 29 Dec 92 00:28:51 GMT
Distribution: bionet
Checksum: 33047 2

LOCUS       HIVH6004      237 bp ss-DNA             VRL       03-DEC-1992
DEFINITION  Human immunodeficiency virus type 1, sample 6004, direct sequence
            CO1 from Haiti, env V3 region
ACCESSION   L07201
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (HIV-1), sample 6004C01 from
            Haiti (PCR amplification and direct sequencing).
  ORGANISM  Human immunodeficiency virus type 2
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   Ou,C.-. and Kalish,M.
  TITLE     (no title given)
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     Kindly provided prior to publication in computer-readable form by
            CDC (Centers for Disease Control), Public Health Service, Dept. of
            Health and Human Services, Atlanta, GA  30333.
FEATURES             Location/Qualifiers
     CDS             <1..>237
                     /product="envelope polyprotein"
                     /codon_start=1
                     /translation="ENFTNNTKTIIVHLNESVVINCTRPNNNTRKSIPMGPGKAFYAT
                     GDIIGDIRQAHCNLSTADWNKTLHQVVKKLGEQFG"
BASE COUNT      103 a     37 c     43 g     54 t
ORIGIN      
        1 gaaaatttca cgaacaatac taaaaccata atagtacacc tgaatgaatc tgtagtaatt
       61 aattgtacaa gacccaacaa caatacaaga aagagtatac ctatgggacc agggaaagct
      121 ttttatgcaa caggagacat aataggagat ataagacaag cacattgtaa ccttagtaca
      181 gcagattgga acaagacttt acatcaggta gttaaaaaat taggagaaca atttgga
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: pol=putative retrovirus pol gene fragment {clone B1} [Salvelinus
Date: 28 Dec 92 21:31:44 GMT
Distribution: bionet
Checksum: 44379 2

LOCUS       S114888       219 bp    DNA             NLM       01-DEC-1992
DEFINITION  pol=putative retrovirus pol gene fragment {clone B1} [Salvelinus
            fontinalis=brook trout, Genomic, 219 nt]
ACCESSION   S45802
KEYWORDS    .
SOURCE      brook trout
  ORGANISM  Salvelinus fontinalis
            Unclassified.
REFERENCE   1  (bases 1 to 219)
  AUTHORS   Stuart,G.R., Dixon,B. and Pohajdak,B.
  TITLE     Isolation of a putative retrovirus pol gene fragment from trout.
  JOURNAL   Comparative Biochemistry and Physiology.  B: Comparative
            Biochemistry 102, 137-142 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 114888.
            This sequence comes from Fig. 2.
FEATURES             Location/Qualifiers
     CDS             1..216
                     /partial
                     /note="Description: putative retrovirus pol gene fragment;
                      For the protein sequence (NCBI gibbsq 114894):  Method:
                     conceptual translation supplied by author.  This sequence
                     comes from Fig. 3."
                     /gene="pol"
                     /product="reverse transcriptase"
                     /codon_start=1
                     /translation="LSVLQQAVSFLGYRISTSGVEMESDRIAAMSNWQTPTTVKEVQR
                     FLGFTGYYRKFIRVLAGCCAITSLLKNA"
BASE COUNT       48 a     51 c     62 g     58 t
ORIGIN      
        1 ctctccgttc ttcagcaggc cgtttccttc ctagggtatc gcatttcgac atcaggggtg
       61 gagatggaga gtgaccgcat tgcagctatg agtaattggc agactcccac cacggtaaag
      121 gaggtgcagc gatttttagg gtttaccggt tactaccgga aatttatcag ggttttggca
      181 ggttgctgcg ccattacctc actgctgaag aacgcgaga
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: H. sapiens DNA segment containing (CA) repeat; clone AFM212yb4;
Date: 21 Dec 92 20:28:02 GMT
Distribution: bionet
Checksum: 16404 2

LOCUS       HUM212YB4     375 bp ds-DNA             PRI       18-NOV-1992
DEFINITION  H. sapiens DNA segment containing (CA) repeat; clone AFM212yb4;
            single read.
ACCESSION   Z17257
KEYWORDS    CA repeat; GT repeat; dinucleotide repeat; microsatellite DNA;
            microsatellite marker; repeat polymorphism.
SOURCE      Homo sapiens DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Weissenbach,J., Gyapay,G., Dib,C., Vignal,A., Morissette,J.,
            Millasseau,P., Vaysseix,G. and Lathrop,M.
  TITLE     A second generation linkage map of the human genome based on highly
            informative microsatellite loci
  JOURNAL   Nature (1992) In press
  STANDARD  full automatic
COMMENT     *source: cell_line=CEPH 134702; *source: clone_library=genomic DNA;

               cloning vector is M13mp18;
               full automatic;
               From EMBL    entry HS212YB4;  dated 15-OCT-1992.
BASE COUNT      108 a     90 c     79 g     98 t
ORIGIN      
        1 agctcaagac atctgcctgc ttcggcctcc caaagtactg ggattacacc tcaaaaccac
       61 tcctggccag cggtattatg gttttagttt gcatttccct gatggctaat tatacacaca
      121 cacacataac acacacacac acacacacac acacacacac actgagatat ataaacatat
      181 attgaatctc tatgtcctct ctctttctca gatatatata tatatgagaa ggcatttgca
      241 atgcgttatg aagcattggc ttgtgtgttt acggaggggt tgaagtcccg cagtgtggtg
      301 tctgcaggct ggagacccag gaaagcagtg ctgtaattcc agtttgagtg cagacacctg
      361 agaagcaagg gagct
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: L.usitatissimum gene for 5S rRNA
Date: 28 Dec 92 21:30:00 GMT
Distribution: bionet
Checksum: 22532 3

LOCUS       LIN5SRNA      706 bp ds-DNA             PLN       01-DEC-1992
DEFINITION  L.usitatissimum gene for 5S rRNA
ACCESSION   X59854
KEYWORDS    ribosomal RNA.
SOURCE      Linum usitatissimum DNA.
  ORGANISM  Linum usitatissimum
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
            Rosidae; Linales; Linaceae.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Schneeberger,R.G. and Cullis,C.A.
  TITLE     Specific DNA alterations associated with the environmental
            induction of heritablechanges in flax
  JOURNAL   Genetics (1991) In press
  STANDARD  full automatic
COMMENT     *source: strain=Stormont Cirrus; *source: clone_library=EMBL4;
            *source: clone=lambda 5S-20, pRS20.7;
               From EMBL    entry LU5SRNA;  dated 16-OCT-1992.
FEATURES             Location/Qualifiers
     repeat_region   1..353
                     /note="5S rRNA repeat 1"
     rRNA            119..238
                     /product="5S rRNA"
                     /note="transcription unit 1"
     repeat_region   354..706
                     /note="5S rRNA repeat 2"
     rRNA            472..591
                     /product="5S rRNA"
                     /note="transcription unit 2"
BASE COUNT      220 a    128 c    149 g    209 t
ORIGIN      
        1 gttcgataat cctgtggaac cgagaccaag atgtagtaaa aagtaatcga aacgagtcta
       61 aaataaggta ggaagtagag aaagtttatt catgtacata tgtgcatgag aagccgacga
      121 gtgaggtcat accagtagta attcatcgga tcccatcatc actctgaagt taaacgtact
      181 tggccaagac tagtactacg atgggtgacc ttttgatcct tccccgagta cacccctttt
      241 attttctatt ttagcagcta tttttacccc aatgtgcaat ggaaacgttt gactatccaa
      301 catccgctag tagatgttta gtaatgacta cggggaacca tgatttcggg tttgttcgat
      361 gctccagcag aaatgagaac aagatgttgt aagacgtaag agaaatgagt gaaaaagaag
      421 ggaggaagta gtgaaagaca atttatgtag ttatgagcac gagaagctga tgaatgagat
      481 cataccaaca ctaattcatt ggatcttgtc atcactctta aattaaacgt acttggttga
      541 gtgtagtact acgatgggtg accttttgat ccatcctccg attgcacacc ttcttttttc
      601 ttcttttttt ctatttttac cctgacgtgt aatagaaatg tttaactaaa caacatcctc
      661 tactagaaca taggtaatga ctctggggaa ccgtgagtgc gatata
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human Ig rearranged H-chain gene V-region, partial cds.
Date: 21 Dec 92 20:46:24 GMT
Distribution: bionet
Checksum: 06175 2

LOCUS       HUMIGHYE       77 bp ds-DNA             PRI       18-NOV-1992
DEFINITION  Human Ig rearranged H-chain gene V-region, partial cds.
ACCESSION   M86995
KEYWORDS    CDR 3; complementarity determining region;
            immunoglobulin heavy chain; lymphoblastic leukemia; processed gene;
            variable region.
SOURCE      Homo sapiens (library: EMBL) bone marrow DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 77)
  AUTHORS   Yamada,M., Wasserman,R., Lange,B., Reichard,B.A., Womer,R.B. and
            Rovera,G.
  TITLE     Minimal residual disease in childhood B-lineage lymphoblastic
            leukemia: Persistence of leukemic cells during the first 18 months
            of treatment
  JOURNAL   N. Engl. J. Med. 323, 448-455 (1990)
  STANDARD  full automatic
BASE COUNT       18 a     17 c     27 g     15 t
ORIGIN      
        1 tgcgaaagat agtggcagtg gctggtacaa gggcggccat ccgtaaggta ctttgactac
       61 tggggccagg gaaccct
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (patient Ams-119) envelope
Date: 22 Dec 92 22:43:35 GMT
Distribution: bionet
Checksum: 06689 2

LOCUS       HIVS1192      105 bp ss-RNA             VRL       23-NOV-1992
DEFINITION  Human immunodeficiency virus type 1 (patient Ams-119) envelope
            glycoprotein V3 loop (env) gene, partial cds.
ACCESSION   L06683
KEYWORDS    V3 loop; env gene; envelope glycoprotein; glycoprotein 120;
            variable region.
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 105)
  AUTHORS   Fouchier,R.A., Groenink,M., Kootstra,N.A., Tersmette,M.,
            Huisman,H.G., Miedema,F. and Schuitemaker,H.
  TITLE     Phenotype-associated sequence variation in the third variable
            region of the human immunodeficiency virus type 1 gp120 molecule
  JOURNAL   J. Virol. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <1..>105
                     /gene="env"
                     /note="env"
                     /codon_start=1
                     /translation="CTRPNNNTRKSIHIAPGSAFYATGAIIGDIRKAHC"
BASE COUNT       47 a     18 c     20 g     20 t
ORIGIN      
        1 tgtacaagac ccaacaacaa tacaagaaaa agtatacata tagcaccagg gagtgcattt
       61 tatgcaacag gagccataat aggagatata agaaaagcac attgt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Hepatitis C virus core protein.
Date: 3 Jan 93 22:14:31 GMT
Distribution: bionet
Checksum: 01856 2

LOCUS       HPCCOREC      176 bp ss-RNA             VRL       23-DEC-1992
DEFINITION  Hepatitis C virus core protein.
ACCESSION   L08138
KEYWORDS    core protein.
SOURCE      Hepatitis C virus (individual_isolate EG-9) RNA.
  ORGANISM  Hepatitis C virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Togaviridae incertae sedis.
REFERENCE   1  (bases 1 to 176)
  AUTHORS   Simmonds,P., McOmish,F., Yap,P.L., Chan,S.-W.W., Lin,C.K.,
            Dusheiko,G., Saeed,A.A. and Holmes,E.C.
  TITLE     Sequence variability in the 5' non-coding region of hepatitis C
            virus: Identification of a new virus type and restrictions on
            sequence diversity
  JOURNAL   J. Gen. Virol. (1992) In press
  STANDARD  full automatic
BASE COUNT       30 a     53 c     57 g     36 t
ORIGIN      
        1 tgagtgttgt gcagcctcca ggaccccccc tcccgggaga gccatagtgg tctgcggaac
       61 cggtgagtac accggaatcg ccgggatgac cgggtccttt cttggattaa cccgctcaat
      121 gcccggaaat ttgggcgtgc ccccgcgaga ctgctagccg agtagtgttg ggtcgc
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Colpoda inflata large subunit ribosomal RNA, 5' end.
Date: 31 Dec 92 01:43:50 GMT
Distribution: bionet
Checksum: 10077 2

LOCUS       CLPRRLSA      365 bp ss-rRNA            RNA       18-DEC-1992
DEFINITION  Colpoda inflata large subunit ribosomal RNA, 5' end.
ACCESSION   M98367
KEYWORDS    ribosomal RNA large subunit.
SOURCE      Colpoda inflata rRNA.
  ORGANISM  Colpoda inflata
            Eukaryota; Animalia; Protozoa; Ciliophora; Kinetophragminophora;
            Vestibulifera; Colpodida; Colpodidae.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Baroin Tourancheau,A., Delgado,P., Perasso,R. and Adoutte,A.
  TITLE     A broad molecular phylogeny of ciliates: identification of major
            evolutionary trends and radiations within the phylum
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 89, 9764-9768 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1..>365
                     /product="ribosomal RNA large subunit"
BASE COUNT      119 a     67 c     96 g     80 t      3 others
ORIGIN      
        1 tgcatctgaa atcaggcaag atcacccgct gaacttaagc atattactaa gcggaggaaa
       61 agaaatcaac gaagattgcc tcagtagcgg cgagtgaagc ggcaatagct caagtttaga
      121 atctgcagtc gtgtcggctg ccgaattgta atctaaagga gttaacaaaa ggggaagccg
      181 aagcataagt tccttgnaac aggacgtcaa agagggtgaa aaccccgtat gtagctttgg
      241 ccgaaccgaa tgttggcttt ctaagagtcg ggttgtttgn nattgcagcc taaacgggag
      301 ataaacttct tctaaggcta aatatctatg ggaaaccgat agcgaacaag tactgtgaag
      361 gaaag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Japenese eel mitochondrion (copy f) ransfer RNA-Pro (tRNA-Pro)
Date: 29 Dec 92 01:26:22 GMT
Distribution: bionet
Checksum: 15526 3

LOCUS       ANGMTTGPAF    739 bp ds-DNA             ORG       08-DEC-1992
DEFINITION  Japenese eel mitochondrion (copy f) ransfer RNA-Pro (tRNA-Pro)
            gene; transfer RNA-Thr (tRNA-Thr) gene; and cytochrome b (cyt b)
            gene, complete cds.
ACCESSION   M95872
KEYWORDS    cytochrome b; transfer RNA-Pro; transfer RNA-Thr.
SOURCE      Mitochondrion Anguilla japonica larva muscle DNA.
  ORGANISM  Mitochondrion Anguilla japonica
            Unclassified.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Sang,T.-K. and Hui,C.-F.
  TITLE     Use mitochondrial DNA sequences to evaluate the population
            structure of Japanese Eel (Anguilla japonica)
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     tRNA            106..178
                     /standard_name="tRNA-Threonine gene"
                     /gene="tRNA-Thr"
                     /citation=[1]
                     /note="putative"
     tRNA            complement(185..254)
                     /standard_name="tRNA-Proline"
                     /gene="tRNA-Pro"
                     /citation=[1]
                     /note="putative"
     D-loop          255..>739
                     /label=d-loop
                     /citation=[1]
     CDS             <1..105
                     /standard_name="cytochrome B gene"
                     /gene="cyt b"
                     /citation=[1]
                     /note="putative"
                     /product="cytochrome b"
                     /codon_start=1
                     /translation="PYIIIGQVASVLYFSLFLVLNPLAGWLENKMMNW"
BASE COUNT      290 a    131 c    103 g    215 t
ORIGIN      
        1 ccatacatta tcatcggtca agtagcatca gtactttact tttccttatt tttagtacta
       61 aacccattag caggttgact agaaaacaaa ataataaatt gataagccct agtagcttaa
      121 tagctaaagc atcggttttg taatccgaag attgaagatt aaaattcttc ctagcgctaa
      181 aaattcagag agaaaagact ttaacttcca tcctcaactc ccaaagctga gatcataaat
      241 tagaccaccc tctgaaatat atattatggt ttgctacata cctgtatgta ctatattaca
      301 tattatgcat tatattacat atatatattt actagtacat ttaatggaaa acaagcataa
      361 gccaatgtac aataccataa atggtattat acccataaac tgataaatag gctaatcaaa
      421 catgaaatat tatctcatac taaaacaggt gggttgacag agtaatgtta acggacattt
      481 atgtttaata catgaaaaga acacatacta ataactgact gaagtctgaa agaccaacaa
      541 aaactgtcac acagatgaag aaaaattctt tattccatat taaactgcac cccacatttt
      601 ctatgtttaa atcaacagta aagtcaagaa accatttaag cgcagtaaga aaccaccaac
      661 cagcacaaat caagtgaata cgtttattga taggtcaggg acagtaattg tagattggca
      721 taaaatgaac tattactgg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: hFc gamma RI=72-kda high affinity IgG FcR [human, Genomic, 324 nt,
Date: 21 Dec 92 20:20:54 GMT
Distribution: bionet
Checksum: 22484 2

LOCUS       M135233S5     324 bp    DNA             NLM       18-NOV-1992
DEFINITION  hFc gamma RI=72-kda high affinity IgG FcR [human, Genomic, 324 nt,
            segment 5 of 6] 
ACCESSION   S42574
KEYWORDS    .
SEGMENT     5 of 6
SOURCE      human
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   van de Winkel,J.G., Ernst,L.K., Anderson,C.L. and Chiu,I.M.
  TITLE     Gene organization of the human high affinity receptor for IgG, Fc
            gamma RI (CD64). Characterization and evidence for a second gene.
  JOURNAL   J. Biol. Chem. 266, 13449-13455 (1991)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 42574.
            This sequence comes from Fig. 2.
BASE COUNT       79 a     80 c     86 g     79 t
ORIGIN      
        1 ctttctcctt agagctattt ccagctccag tgctgaatgc atctgtgaca tccccactcc
       61 tggaggggaa tctggtcacc ctgagctgtg aaacaaagtt gctcttgcag aggcctggtt
      121 tgcagcttta cttctccttc tacatgggca gcaagaccct gcgaggcagg aacacatcct
      181 ctgaatacca aatactaact gctagaagag aagactctgg gttatactgg tgcgaggctg
      241 ccacagagga tggaaatgtc cttaagcgca gccctgagtt ggagcttcaa gtgcttggtg
      301 agtgagaatg acgggaagcc actg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Plasmid pIP816 (from Enterococcus faecium BM4147) D,
Date: 3 Jan 93 22:07:04 GMT
Distribution: bionet
Checksum: 53083 3

LOCUS       IP8VANY      1135 bp ds-DNA             BCT       21-DEC-1992
DEFINITION  Plasmid pIP816 (from Enterococcus faecium BM4147) D,
            D-carboxypeptidase gene, complete cds.
ACCESSION   M90647
KEYWORDS    D,D-carboxyesterase; D,D-carboxypeptidase; vanY gene.
SOURCE      Plasmid pIP816 DNA.
  ORGANISM  Plasmid pIP816
            Prokaryotae.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Arthur,M., Molinas,C. and Courvalin,P.
  TITLE     Sequence of the vanY gene required for production of a
            vancomycin-inducible D,D-carboxypeptidase in Enterococcus faecium
            BM4147
  JOURNAL   Gene 120, 111-114 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             51..962
                     /gene="vanY"
                     /product="D,D-carboxypeptidase"
                     /codon_start=1
                     /translation="MKKLFFLLLLLFLIYLGYDYVNEALFSQEKVEFQNYDQNPKEHL
                     ENSGTSENTQEKTITEEQVYQGNLLLINSKYPVRQESVKSDIVNLSKHDELINGYGLL
                     DSNIYMSKEIAQKFSEMVNDAVKGGVSHFIINSGYRDFDEQSVLYQEMGAEYALPAGY
                     SEHNSGLSLDVGSSLTKMERAPEGKWIEENAWKYGFILRYPEDKTELTGIQYEPWHIR
                     YVGLPHSAIMKEKNFVLEEYMDYLKEEKTISVSVNGEKYEIFYYPVTKNTTIHVPTNL
                     RYEISGNNIDGVIVTVFPGSTHTNSRR"
BASE COUNT      419 a    155 c    225 g    336 t
ORIGIN      
        1 tctagaaata tttcatactt ccaactatat agttaaggag gagactgaaa atgaagaagt
       61 tgtttttttt attgttattg ttattcttaa tatacttagg ttatgactac gttaatgaag
      121 cactgttttc tcaggaaaaa gtcgaatttc aaaattatga tcaaaatccc aaagaacatt
      181 tagaaaatag tgggacttct gaaaataccc aagagaaaac aattacagaa gaacaggttt
      241 atcaaggaaa tctgctatta atcaatagta aatatcctgt tcgccaagaa agtgtgaagt
      301 cagatatcgt gaatttatct aaacatgacg aattaataaa tggatacggg ttgcttgata
      361 gtaatattta tatgtcaaaa gaaatagcac aaaaattttc agagatggtc aatgatgctg
      421 taaagggtgg cgttagtcat tttattatta atagtggcta tcgagacttt gatgagcaaa
      481 gtgtgcttta ccaagaaatg ggggctgagt atgccttacc agcaggttat agtgagcata
      541 attcaggttt atcactagat gtaggatcaa gcttgacgaa aatggaacga gcccctgaag
      601 gaaagtggat agaagaaaat gcttggaaat acgggttcat tttacgttat ccagaggaca
      661 aaacagagtt aacaggaatt caatatgaac catggcatat tcgctatgtt ggtttaccac
      721 atagtgcgat tatgaaagaa aagaatttcg ttctcgagga atatatggat tacctaaaag
      781 aagaaaaaac catttctgtt agtgtaaatg gggaaaaata tgagatcttt tattatcctg
      841 ttactaaaaa taccaccatt catgtgccga ctaatcttcg ttatgagata tcaggaaaca
      901 atatagacgg tgtaattgtg acagtgtttc ccggatcaac acatactaat tcaaggaggt
      961 aaggatggcg gaatgaaacc aacgaaatta atgaacagca ttattgtact agcacttttg
     1021 gggtaacgtt agctttttaa tttaaaaccc acgttaacta ggacattgct atactaatga
     1081 tacaacttaa acaaaagaat tagaggaaat tatattggga aaaatattat ctaga
//