From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Anabaena sp. patB gene, complste cds; ORF2 gene, partial cds.
Date: 21 Dec 92 20:38:48 GMT
Distribution: bionet
Checksum: 34433 7

LOCUS       ANAPATBA     3442 bp ds-DNA             BCT       19-NOV-1992
DEFINITION  Anabaena sp. patB gene, complste cds; ORF2 gene, partial cds.
ACCESSION   L06674
KEYWORDS    patB gene.
SOURCE      Anabaena sp. (strain 7120) DNA; and Anabaena sp. (strain PAT2) DNA.
  ORGANISM  Anabaena sp.
            Prokaryotae; Gracilicutes; Oxyphotobacteria; Cyanobacteria;
            Nostocales; Nostocaceae.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Liang,J.J. and Scappino,L.A.
  TITLE     The patB gene product, required for growth of the cyanobacterium
            Anabaena 7120 under nitrogen limition conditions, contains
            ferredoxin and helix-turn-helix domains
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     mutation        replace(1476..1478,"ga")
     variation       replace(1476..1478,"ga")
                     /note="strain PAT2"
                     /evidence="EXPERIMENTAL"
     CDS             <2128..2742
                     /note="ORF2"
                     /codon_start=1
                     /translation="LTSTTTDNFVNILWEAAAAYREQNKNRPQPEVIVNALLQAEKSA
                     KKQHLTYDFDSLVGQWRLCFATGTKKAQKRGGIILGKGWYVPQFTKIYISFSSGSTED
                     VNRGEVGNQVQLGSLLLRLTGPAKYLGKKNLLAFDFTQMYINVFGRKIYQQNIRSGKV
                     NYEDFYSQSIAKQAFFAFFIVTQDFIAARGRGGGLALWIRESNG"
     CDS             136..1725
                     /gene="patB"
                     /product="PatB"
                     /codon_start=1
                     /translation="MPYTIPNNSCVGCDNCRPQCPTGAIKIENNKYWIDPSLCNNCEG
                     YYAEPQCVIACPVKSPIPWQAKKGRCKVEPRDATSPDLFSNGKNNPFASAIAIWEACN
                     LLAQRTALNWETDEAGYLCYSRAVNQGRGKIAFHIQDPFQVNEKAKDVAAIEVFDIRA
                     ACIHLILAAHATALDKPWEQEFTIDERQLEKYLGLEKRKDLSKAAKLALMKNLVQQAC
                     SLIISMDWPQQGQVKGFSVANSRLWDLVSIQHHFQEDKLGCKYLVGLTFKVKAGIWSQ
                     YFLNKQGCKERTAFYQYGSLPKTLLTTVMSIWQQHEGAVRLMLWLLFKTKMGKEQRIT
                     VPTLLRIAYGQEKVNIATRHREERKRLLRTFENDLEVLNHLGIKPIFDPITYPLAIQP
                     LWAKLVDIPEDPDEALEFWINDAGGETRLTDSGPRGKWNLLMNARILSFELPPEWERQ
                     IAESEKKQRRTAKSRQKLKTAGDLVGEQILQARKSLNLSQRELAKLTGKSQSWIRDIE
                     NGRLKAKLEDQTLLRKVLHIA"
BASE COUNT     1075 a    663 c    744 g    960 t
ORIGIN      
        1 gcaattattt cggcaagaat caagtattct tgctggatag ctaattaagt aagtggttag
       61 ttatcaatca acaggacaca tccaggggga aacttgagcc aaacatctca acgattaggg
      121 tgggaagaaa gttatatgcc ttatacaatt cctaacaaca gttgcgttgg atgtgacaac
      181 tgccgtcccc aatgtcctac gggtgcaatc aaaatcgaaa acaataaata ctggatagat
      241 ccgtctcttt gtaataattg tgagggttat tatgctgaac cgcagtgtgt gatagcttgt
      301 ccagtcaaat cccccatacc gtggcaagca aagaaggggc gatgtaaagt ggaaccgcga
      361 gatgcaacta gcccagactt attttctaat gggaagaata acccatttgc atcggcgatc
      421 gcaatttggg aagcctgcaa cctactagcg caacgtacag ccctgaactg ggaaactgac
      481 gaagcaggct atctctgcta cagtcgagca gtcaaccaag gacgaggaaa aatcgctttt
      541 catatccaag acccgttcca agtcaacgaa aaggccaaag atgtagcagc cattgaggta
      601 tttgatatta gagctgcttg tatccattta attctagctg cccatgctac agccttagat
      661 aaaccttggg aacaggagtt tactattgac gaacgacagc tagaaaaata tttagggtta
      721 gagaaacgca aagacctgag caaagccgcc aaactagccc taatgaaaaa tcttgtgcag
      781 caagcttgct cacttattat ttctatggac tggcctcagc aaggacaagt gaaggggttt
      841 tcagtcgcca atagccgctt gtgggactta gtaagtattc agcaccactt tcaagaagat
      901 aaattgggtt gtaaatatct cgttgggcta acatttaaag tcaaagccgg gatatggagc
      961 caatatttct taaacaaaca aggatgcaaa gaacgcactg cattctatca atatggtagc
     1021 ctacccaaga ccctgctaac cacagtcatg agtatttggc agcagcacga aggagccgta
     1081 agattaatgc tatggttatt atttaaaacc aaaatgggta aggaacaacg catcacagtt
     1141 cctaccttac tacgtattgc ttatggtcaa gaaaaagtca atattgctac tagacatcga
     1201 gaagaacgca aacgcctatt acggacattt gaaaatgatt tagaagtact aaatcattta
     1261 ggaattaaac ccatcttcga tcccatcact tatcctcttg ctatccaacc tttatgggcg
     1321 aaattagtag atattcctga agaccccgat gaagcattag agttttggat taatgatgca
     1381 ggtggtgaaa ctcgcctcac tgatagcggc ccccgtggta agtggaatct attgatgaat
     1441 gcgcgaattt tatcctttga actaccacca gaatgggaac gacaaattgc tgaatcagaa
     1501 aaaaaacaac ggcgaactgc taagagtaga caaaaactaa aaaccgcagg tgatttagtt
     1561 ggtgagcaaa ttttgcaagc tcgcaaaagt ttgaacttat ctcaacggga attagcaaag
     1621 ttaactggta aaagccaaag ctggattcga gacatagaaa atggtcgctt aaaagcaaag
     1681 ctagaagacc agacactttt acgcaaagtg ttacatatcg cttaaccaat aagtagcaat
     1741 ttcataaatt aaaccgtcga tgtatgttgt catttagtct caaattacta ttattaatcg
     1801 gcggttatct ataaagcaaa aataaaatta ttgtagggga gccaatgcgt tgcggaggtt
     1861 ttctccgttg tagcaactgg cgttgtgtta ggcgctgatt ttccagataa ttggtcacga
     1921 aataactatc cttgcgccta acgcaccatc cgtgaggcgg tgcattacgg ctaaattttc
     1981 ttgtctctaa gtcccaaatt ctttcatagc cgtaacacac cctacttaag atttactata
     2041 attattttga attttgcgaa aagttctgta ggcgggtttc cccggtagga aacttttcaa
     2101 gacgaatttt gaattggagc gaaggccttg acatctacca ctacagacaa ctttgttaac
     2161 atcttatggg aagcggcggc ggcgtatcgt gaacaaaaca aaaatcgtcc ccagccagaa
     2221 gtcatagtaa atgctttatt acaagcggaa aaatcagcca agaaacaaca cctgacttat
     2281 gattttgata gtttagttgg acaatggcga ttgtgttttg caacagggac gaaaaaagct
     2341 caaaaacgcg ggggaataat tttaggaaag ggttggtatg taccgcaatt taccaaaatt
     2401 tatatatctt ttagttccgg ttcaacagaa gatgttaaca gaggggaagt tggcaaccag
     2461 gtgcaattgg ggtcattatt attaagactt acaggcccag ctaaatattt aggcaagaaa
     2521 aatcttttag cttttgactt tacccaaatg tatattaatg tatttggtcg aaaaatttac
     2581 caacaaaata ttcgttcagg gaaagttaat tacgaagatt tttacagcca atccatcgct
     2641 aaacaagcat tctttgcttt ctttatagtg acacaagatt ttattgccgc ccgtggacgt
     2701 ggtggcggtt tggcactctg gattcgggaa agtaatgggt aattcagaat ggtgtagagt
     2761 atgtatggct aaaatcaaat aagcgtccta ttttgtatga gtaaaagaag cgatcgcttg
     2821 ctcaatttct ttactgacta gctgatttcc ttgtaagctg agatgaatat ggtctctgta
     2881 taaggctttg aagttatttg tggcgttgaa tattggtaaa aagtctatat atgccatctc
     2941 ctgagactga gtaaagtcct tcaggcgttg acgtgctgtg atttcgtaat cacgggggcc
     3001 tggttcgccc aattctcgta ataagggagt catcactagc agaaattggc tattgttttc
     3061 atgagcgaat cgttgaattt taccaatcgc atctagatta atccctacac gatcgccccc
     3121 ttctttctgc aatgcaacta attctgggat tgactggggt ttttggatgt aacgctgcca
     3181 tacttctatt aatgctaggg gtggtttttt gtctggatag ttgcgatcac gtcctactgg
     3241 taaagatgtc ggtgcagtgg caaataaatc atcagtattc agtactaata cgattatttg
     3301 ggcatgaaag ttaccataac gttgcaagta agctagctcg tttctcggcc cccaggaatt
     3361 agccgaagca ttcagtacct ccacttgtcg ataattgtca tgagttgatg aactaaggga
     3421 agttgtcatc aaattagaga tt
//