From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Escherichia coli rpos for RNA polymerase sigma subunit, sigma-38.
Date: 3 Jan 93 22:13:00 GMT
Distribution: bionet
Checksum: 54481 4

LOCUS       ECOSIGMA38   1642 bp ds-DNA             BCT       23-DEC-1992
DEFINITION  Escherichia coli rpos for RNA polymerase sigma subunit, sigma-38.
ACCESSION   D13548
KEYWORDS    RNA polymerase sigma subunit; sigma-38.
SOURCE      Escherichia coli (strain DH1) DNA, clone plasmid pKTF1.
  ORGANISM  Escherichia coli
            Prokaryotae; Gram-negative facultatively anaerobic rods;
            Enterobacteriaceae.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Tanaka,K., Takayanagi,Y., Fujita,N., Ishihama,A. and Takahashi,H.
  TITLE     Heterogeneity of the principal sigma factor of Escherichia coli:
            the rpoS gene product, sigma-38, is a second principal sigma factor
            of RNA polymerase in stationary-phase Escherichia coli
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     RBS             481..485
     terminator      1500..1531
     terminator      1540..1574
     CDS             493..1485
                     /product="RNA polymerase sigma subunit, sigma-38"
                     /codon_start=1
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVELEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
BASE COUNT      436 a    387 c    461 g    358 t
ORIGIN      
        1 ggtaccaaca gcaagcacaa ccgagccgac tgtcagcagt acatcaacca gtacgcctat
       61 ctccacctgg cgctggccga ctgagggcaa agtgatcgaa acctttggcg cttctgaggg
      121 gggcaacaag gggattgata tcgcaggcag caaaggacag gcaattatcg cgaccgcaga
      181 tggccgcgtt gtttatgctg gtaacgcgct gcgcggctac ggtaatctga ttatcatcaa
      241 acataatgat gattacctga gtgcctacgc ccataacgac acaatgctgg tccgggaaca
      301 acaagaagtt aaggcggggc aaaaaatagc gaccatgggt agcaccggaa ccagttcaac
      361 acgcttgcat tttgaaattc gttacaaggg gaaatccgta aacccgctgc gttatttgcc
      421 gcagcgataa atcggcggaa ccaggctttt gcttgaatgt tccgtcaagg gatcacgggt
      481 aggagccacc ttatgagtca gaatacgctg aaagttcatg atttaaatga agatgcggaa
      541 tttgatgaga acggagttga ggtttttgac gaaaaggcct tagtagaact ggaacccagt
      601 gataacgatt tggccgaaga ggaactgtta tcgcagggag ccacacagcg tgtgttggac
      661 gcgactcagc tttaccttgg tgagattggt tattcaccac tgttaacggc cgaagaagaa
      721 gtttattttg cgcgtcgcgc actgcgtgga gatgtcgcct ctcgccgccg gatgatcgag
      781 agtaacttgc gtctggtggt aaaaattgcc cgccgttatg gcaatcgtgg tctggcgttg
      841 ctggacctta tcgaagaggg caacctgggg ctgatccgcg cggtagagaa gtttgacccg
      901 gaacgtggtt tccgcttctc aacatacgca acctggtgga ttcgccagac gattgaacgg
      961 gcgattatga accaaacccg tactattcgt ttgccgattc acatcgtaaa ggagctgaac
     1021 gtttacctgc gaaccgcacg tgagttgtcc cataagctgg accatgaacc aagtgcggaa
     1081 gagatcgcag agcaactgga taagccagtt gatgacgtca gccgtatgct tcgtcttaac
     1141 gagcgcatta cctcggtaga caccccgctg ggtggtgatt ccgaaaaagc gttgctggac
     1201 atcctggccg atgaaaaaga gaacggtccg gaagatacca cgcaagatga cgatatgaag
     1261 cagagcatcg tcaaatggct gttcgagctg aacgccaaac agcgtgaagt gctggcacgt
     1321 cgattcggtt tgctggggta cgaagcggca acactggaag atgtaggtcg tgaaattggc
     1381 ctcacccgtg aacgtgttcg ccagattcag gttgaaggcc tgcgccgttt gcgcgaaatc
     1441 ctgcaaacgc aggggctgaa tatcgaagcg ctgttccgcg agtaagtaag catctgtcag
     1501 aaaggccagt ctcaagcgag gctggccttt tctgtgcaca ataaaaggtc cgatgcccat
     1561 cggacctttt tattaaggtc aaattaccgc ccatacgcac caggtaatta agaatccggt
     1621 aaaaccgaga atggtcgtta ac
//