From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Drosophila melanogaster DNA-binding protein isoform I, complete
Date: 13 Jan 93 05:46:24 GMT
Distribution: bionet
Checksum: 01954 9

LOCUS       DROBPIS      3824 bp ds-DNA             INV       12-JAN-1993
DEFINITION  Drosophila melanogaster DNA-binding protein isoform I, complete
            cds, and isoforms II and III, 3' end.
ACCESSION   M97196
KEYWORDS    DNA-binding protein isoform I; DNA-binding protein isoform II;
            DNA-binding protein isoform III.
SOURCE      Drosophila melanogaster (strain Oregon R) (library: EMBL3) DNA.
  ORGANISM  Drosophila melanogaster
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
            Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE   1  (bases 1 to 3824)
  AUTHORS   Hsu,T., Gogos,J.A., Kirsh,S.A. and Kafatos,F.C.
  TITLE     Multiple zinc finger forms resulting from developmentally regulated
            alternative splicing of a transcription factor gene
  JOURNAL   Science 257, 1946-1950 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     mRNA            join(231..457,458..1735,1736..1914,1915..3824)
     5'UTR           1..230
     TATA_signal     193..197
     exon            231..457
                     /number=1
     exon            458..1735
                     /number=2
     exon            1736..1914
                     /number=3
     exon            1915..3824
                     /number=4
     3'UTR           2282..3824
     CDS             join(<1341..1735,1915..2281)
                     /note="5' end of isoform III not yet determined
                     experimentally; only DNA-binding domains presented here"
                     /product="DNA-binding protein isoform III"
                     /codon_start=1
                     /translation="MQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAI
                     VSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHK
                     IRHKCPDCPKTFKTPGTLAMHRKIHTGEAEREAVPLRLLREVLQREGLSDQAHTDAHR
                     REAVHLSVLRQALHAAQRPHCAHDQAASALGKAGRWPPVTRSCPSRSSSSYSSSKSFW
                     SWCAAAVVRRHGYRSQEAICGGCGIGLGRTAAETG"
     CDS             join(<1091..1830,1915..2090)
                     /note="5' end of isoform II not yet determined
                     experimentally; only DNA-binding domains presented here"
                     /product="DNA-binding protein isoform II"
                     /codon_start=2
                     /translation="QCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTP
                     EEQHHQQQLQAEHHHQQQHQQQQQQQQQQQESLEQQQREMQEQAQQQQVHHHQQDQDL
                     AGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQAN
                     PGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATP
                     KERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGE
                     KPYTCPYCDKRFTQRSALTVHTTKLHPL"
     CDS             558..2090
                     /product="DNA-binding protein isoform I"
                     /codon_start=1
                     /translation="MIKSTTNPQEQRLPRPEDQSPAPPPPPPSSATTSTAAPATPTHQ
                     VATVIANMDTLKTAFLPNLSMDPNVHVSPHYCPMCHQQFERPQHVADHMQLCHGITLN
                     AQGAIATLDGGHPQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMC
                     SIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDM
                     RLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQESLEQQQREMQEQAQQQQVHHHQQ
                     DQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYA
                     IQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEA
                     DATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFRCGYCGRAFTVKDYLNKHLTT
                     HTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKLH
                     PL"
BASE COUNT     1203 a    951 c    748 g    922 t
ORIGIN      
        1 aaattatcag cttatgaaag tatcccgatg atcgcagaaa cgatagaccc gataaatttg
       61 gaaatagaag aactcctaat atcgaaagct ttgcttacaa tttttataac gttaagttaa
      121 agttatatta tactttaatt tgcatactta gaaaacgttt tatttgtcat attttaggaa
      181 aaggcagaaa aatatatcgt tagtcaaggc gttgccacat cgtcagttct agagcgacgt
      241 tgccatcgta gtttcgatgc cgtaatcgag tactttttgt tgtagttgta catttttcgc
      301 caaaaataat aataaaagtg aaaaattttt tttgttaata tacgttttat ttgttgtaca
      361 aaggagaaaa atgttattaa actgattggc cgccccagca ttttcgtgac ccccgctcca
      421 aatacaacaa aatcgaacgg ccgccagcaa caacaagcgc ctatcgcctt ctttaaccgc
      481 caattgctcc tgctcctgcc cactaaccaa gtcaaaccaa aagaagcgat tactctccaa
      541 gcgccagcgg aagtgaaatg ataaagtcca ccacgaatcc acaggaacag cgtctgccac
      601 gccccgagga tcagtcgcca gcgccgccgc cgccgccccc ctcctcagcc accacctcca
      661 ccgccgcccc agccacgccc acgcaccaag tggccaccgt gatagccaac atggacaccc
      721 tgaagacagc ctttctgccc aatctcagca tggaccccaa tgtgcacgtg tcgccgcact
      781 attgtcccat gtgtcaccag cagtttgagc gaccgcagca cgtcgcggat cacatgcagc
      841 tgtgccacgg gatcacgctg aacgcccagg gagccattgc cacgctggac ggcggtcatc
      901 cgcaggcaca gcagcacccc aagctcagcc acccctgctt caattgtgat gaaaagtttg
      961 gcaacgccgt cgatttagac gaacaccatc ggctggccca tcagacgccc gccttcctgt
     1021 cccgctgcct tatgtgcagc atctatggca tccactcggc cacccagcag cccaacgagt
     1081 acaaatgcac gcagtgcggc tccatttgca ccaccgccat gctggctgcc ggacagcagg
     1141 gctttatgga acagcaggag gcggcggtga cgcccgacga tcagctgccg gcaatggcgc
     1201 cccgtgatat gagactgacg cccgaggagc agcaccatca gcagcaactg caggcggagc
     1261 accaccatca gcaacagcac caacaacaac aacagcagca gcagcagcag caggaatcgc
     1321 tggagcagca gcagcgtgaa atgcaggagc aggcgcaaca gcagcaggtg caccatcacc
     1381 agcaggatca ggatctcgcc ggcgaccagg tggcgctgaa ggtgccacca ctcaccgtca
     1441 agctaaacaa gaacgccaac ggtggcgcca ttgtgtcgca tccgcaggtc attatcaagg
     1501 aggagccact cagcctgagc gacagtggtg atgttgtcaa ctctgtgcct gtctatgcca
     1561 tacaagccaa tcccggtgta cccgctccgg ccagttcggg tgtgctagtc ggcacacaaa
     1621 cggtacctgc cgatctggcg cacaagatcc ggcacaaatg tccggattgt ccaaagacct
     1681 tcaagacgcc cggcacgctg gccatgcacc gcaagataca cacaggcgaa gcagacgcca
     1741 cgcccaaaga acgcccctac acgtgctcct actgcggcaa gtccttcact caatcgaata
     1801 cactaaaaca gcacactcgc atacatacag gtgagaaacc atttagatgt ggctattgtg
     1861 gcagggcgtt cactgttaag gattacctga acaaacattt aacgactcac acgggagaga
     1921 agccgttcca ctgcggttac tgcgagaagt ccttcagcgt gaaggactat ctgaccaagc
     1981 acatacggac gcacaccggc gagaagccgt acacctgtcc gtattgcgac aagcgcttca
     2041 cgcagcgcag cgccctcact gtgcacacga ccaagctgca tccgctctag ggaaggccgg
     2101 gcggtggccg ccagttaccc gttcctgccc cagccgctcc tcctcctcct actcatcctc
     2161 caaatccttc tggtcctggt gcgccgccgc cgttgtccgc cgacacggat acagatccca
     2221 agaagccatc tgcggcggct gcggcatcgg cttaggacga actgcagcgg aaacgggatg
     2281 agcaaaccaa taaatgaaag accatttcaa agacgagaca cactcacgta gacgggagtt
     2341 atgcaactgc agcggatgca acaactgcaa ccaacgactg gcaaatctct tcgcagtgct
     2401 gctagattaa attactaaat tagatacata ccttcagttc ggttaacaca gaagcagaag
     2461 cagaaacaga gttgtactaa attagcatac agttcgtaga atgtttaagt tattgcaatc
     2521 gatttttgat tcttattact atttggttat gtagatgttt tgcaattttt attttttata
     2581 cacctatgta tatcgtatat aatattttgt tattctatga gattttatat ggtgactcca
     2641 tagcgcacac tcacttacgc gcggcgctat acagacacac acacaaacac acacacaccc
     2701 aaaactacac acaacacaca tatattattt ataaagagag agaaaatatt tttactcata
     2761 tactttgtgg caatattatt tttattactt ccttaaattg tttgtaaatg ttactgaaag
     2821 cagcaaaaca aaaagaaaaa ggtaaactca tgtctacgcg caaaacttaa attattttta
     2881 taaattatac atctatttta ttcgaactca aaacaacaca aaattattta tttttacgtg
     2941 aaagaacgtt tttcaaaatt tcgactcgta gcggaaatga caaaggacca atacgaaatt
     3001 tagtcatttc tcaattattt gcacacgagc aggatctcgt ttgttttggc tttaaaattt
     3061 atttactttt aattaactaa atgatctaat cattttagct tgtttttatt gatgaatgtt
     3121 aaccattgtt tattttttaa attatttaaa ttgaaagcgc tgcttttgtt tgttaaacta
     3181 aactaaacta aacagtgaga ttgtataaaa ctttaaaaaa aaaaggaaaa acgaaaaaca
     3241 taactaagaa attaatttta caaaatttgc attttttaac gcaaaacaaa aagtatttaa
     3301 ggcaaatcga aatgagaaat ctacgctaaa cgcaacacag ctttatgcgc caaactagaa
     3361 gattaaaaaa aaattaacat aacgatctac acaattgata cttttgataa aaagaaagct
     3421 tcaagttgtt tttgtaatat atataaatat ggattgatca tttttacgac tacttaaacg
     3481 cgttttttta aaccgagcaa atgattactt gcaagagttg tatcgtacta aaatcgacta
     3541 aaacttaaac taaaactgta gcaaaaccaa aaccatgtac atttttataa catagtgtta
     3601 tataattata aagtatgcaa atatataaac ctgtatctaa tattaatgca taatacactc
     3661 aaacaaattg tctacctaat ggcacataga caagcaacaa acgatgcgca gcgcatgtaa
     3721 aaccaaaata aattctaagt actaaactat tgtaattctt taagttttaa ataaaccgtg
     3781 aagagttgac gatcaaaagc aaacagcaaa acgctaaatg cagc
//