From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Infectious bursal disease virus gene for VP1, partial sequence.
Date: 31 Dec 92 01:45:44 GMT
Distribution: bionet
Checksum: 18467 5

LOCUS       IBDVP1B      1576 bp ds-RNA             VRL       18-DEC-1992
DEFINITION  Infectious bursal disease virus gene for VP1, partial sequence.
ACCESSION   D12610
KEYWORDS    RNA dependent RNA polymerase; VP1.
SOURCE      Infectious bursal disease virus (strain 52/70, sub_species serotype
            1) cDNA to genomic RNA.
  ORGANISM  Infectious bursal disease virus
            Viridae; ds-RNA nonenveloped viruses; Birnaviridae.
REFERENCE   1  (sites)
  AUTHORS   Morgan,M.M., Macreadie,I.G., Harley,V.R., Hudson,P.J. and Azad,A.A.
  TITLE     Sequence of the small double-stranded RNA genomic segment of
            infectious bursal disease virus and its deduced 90-kDa product
  JOURNAL   Virology 163, 240-242 (1988)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Bayliss,C.D.
  TITLE     Cloning and sequencing of infectious bursal disease virus and an
            investigation of the antigens of the virus
  JOURNAL   Unpublished (1990)
  STANDARD  full automatic
COMMENT     Submitted (10-JUL-1992) to DDBJ by: Christopher Bayliss D. J.
            Hillis Miller Health Center College of Medicine Department of
            Immunology and Medical Microbiology University of Florida Box
            J-266, JHMHC Gainesville, Florida 32610-0266 U.S.A. Phone:
            904-392-3093 Fax:    904-392-3133 The sequence corresponds to 975
            to 2551 bp of the sequence published by Morgan et al. 1988.

               [1]  sites.
FEATURES             Location/Qualifiers
     CDS             <1..>1576
                     /note="putative RNA-dependent RNA polymerase"
                     /product="VP1"
                     /codon_start=2
                     /translation="KSTWLTKTRNIWSAPSPTHLMISMITWPVMSNSPNNVLNIEGCP
                     SLYKFNPFRGGLNRIVEWILAPEEPKALVYADNIYIVHSNTWYSIDLEKGEANCTRQH
                     MQAAMYYILTRGWSDNGDPMFNQTWATFAMNIAPALVVDSSCLIMNLQIKTYGQGSGN
                     AATFINNHLLSTLVLDQWNLMRQPRPDSEEFKSIEDKLGINFKIERSIDDIRGKLRQL
                     VPLAQPGYLSGGVEPEQSSPTVELDLLGWSATYSKDLGIYVPVLDKERLFCSAAYPKG
                     VENKSLKSKVGIEQAYKVVRYEALRLVGGWNYPLLNKACKNNAGAARRHLEAKGFPLD
                     EFLAEWSELSEFGEAFEGFNIKLTVTSESLAELNKPVPPKPPNVNRPVNTGGLKAVSN
                     ALKTGRYRNEAGLSGLVLLATARSRLQDAVKAKAEAEKLHKSKPDDPDADWFERSETL
                     SDLLEKADIASKVAHSALVETSDALEAVQSTSVYTPKYPEVKNPQTASNPVVGLHLPA
                     KRATGVQAALLGAGTSR"
BASE COUNT      440 a    446 c    403 g    287 t
ORIGIN      Segment B.
        1 caaaagcaca tggctcacca agacccggaa catatggtca gctccatccc caacacacct
       61 catgatctcc atgatcacct ggcccgtgat gtccaacagc ccaaacaacg tgttgaacat
      121 tgaagggtgt ccatcactct acaaattcaa cccgttcaga ggggggttga acaggatcgt
      181 cgagtggata ttggctccgg aagaacccaa ggctctcgta tatgcggaca acatatacat
      241 tgtccactca aacacgtggt actcaattga cctagagaag ggcgaggcaa actgcactcg
      301 ccaacacatg caagccgcaa tgtactacat cctaaccaga gggtggtcag acaacggcga
      361 cccaatgttc aatcaaacat gggctacctt tgccatgaac attgcccctg ctctagtggt
      421 agactcatcg tgcctgataa tgaacctgca aatcaagacc tatggtcaag gcagcgggaa
      481 tgcagccacg ttcatcaaca accacctctt gagcacgcta gtgcttgacc agtggaacct
      541 gatgagacag cccagaccag acagcgagga gttcaaatca attgaggaca agctaggtat
      601 caacttcaag attgagaggt ccattgatga catcaggggc aagctgagac agcttgtccc
      661 ccttgcacaa ccagggtacc tgagtggggg ggttgaacca gaacaatcca gcccaactgt
      721 tgagctcgac ctactagggt ggtcagctac atacagcaaa gatctcggga tctatgtgcc
      781 ggtgcttgac aaggaacgcc tattttgttc tgctgcgtat cccaagggag tagagaacaa
      841 gagtctcaag tccaaggtcg ggatcgagca ggcatacaag gtagtcaggt atgaggcgtt
      901 gaggttggta ggtggttgga actacccact cctgaacaag gcctgcaaga ataacgcagg
      961 cgccgctcgg cgacatctgg aggccaaggg gttcccactc gacgagttcc tggccgagtg
     1021 gtccgagctg tcagagttcg gtgaggcctt cgaaggcttc aatatcaagc tgaccgtaac
     1081 atctgagagc ctagccgaac tgaacaagcc agtacccccc aagcccccaa atgtcaacag
     1141 accagtcaac actgggggac tcaaggcagt cagcaacgcc ctcaagaccg gtcggtacag
     1201 gaacgaagcc ggactgagtg gtctcgtcct tctagccaca gcaagaagcc gtctgcaaga
     1261 cgcagtcaag gccaaggcag aagccgagaa actccacaag tccaagccag acgaccccga
     1321 tgcagactgg tttgaaagat cagaaactct gtcagacctt ctggagaaag ccgacatcgc
     1381 cagcaaggtc gcccactcag cactcgtgga aacaagcgac gctcttgaag cagttcagtc
     1441 gacttccgtg tacaccccca agtacccaga agtcaagaac ccacagaccg cctccaaccc
     1501 tgttgttggg ctccacctgc ccgccaagag agccaccggt gtccaggctg ctcttctcgg
     1561 agcaggaacg agcaga
//