From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rhesus macaque polyoma virus major structural protein VP1 gene, 3'
Date: 31 Dec 92 01:40:56 GMT
Distribution: bionet
Checksum: 25926 4

LOCUS       SV4VP1        763 bp ds-DNA             VRL       17-DEC-1992
DEFINITION  Rhesus macaque polyoma virus major structural protein VP1 gene, 3'
            end.
ACCESSION   M99353
KEYWORDS    major structural protein VP1.
SOURCE      Rhesus macaque polyomavirus (strain Br91) DNA.
  ORGANISM  Rhesus macaque polyomavirus
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
            Polyomaviruses.
REFERENCE   1  (sites)
  AUTHORS   van Heuverswyn,H. and Fiers,W.
  TITLE     Nucleotide sequence of the Hind-C fragment of Simian Virus 40 DNA:
            comparison of the 5'-untranslated region of wild-type virus and of
            some deletion mutants
  JOURNAL   Eur. J. Biochem. 100, 51-60 (1979)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Ilyinskii,P.O., Daniel,M.D., Horvath,C. and Desrosiers,R.C.
  TITLE     Genetic analysis of simian virus 40 from brains and kidneys of
            macaque monkeys
  JOURNAL   J. Virol. 66, 6353-6360 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     variation       replace(10,"t")
                     /citation=[1]
                     /note="nucleotide 2239 in SV40 strain 776"
     variation       replace(439^440,"aac")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2669-2671 in SV40 strain 776"
     variation       replace(525,"g")
                     /citation=[1]
                     /note="nucleotide 2757 in SV40 strain 776"
     mutation        replace(531^532,"tgatta")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2764-2769 in SV40 strain 776"
     mutation        replace(554,"a")
                     /citation=[1]
                     /note="nucleotide 2792 in SV40 strain 776"
     variation       replace(680,"c")
                     /citation=[1]
                     /note="nucleotide 2918 in SV40 strain 776"
     variation       replace(712,"a")
                     /citation=[1]
                     /note="nucleotide 2950 in SV40 strain 776"
     CDS             1..364
                     /partial
                     /note="partial"
                     /product="major structural protein VP1"
                     /codon_start=2
                     /translation="TVLLDEQGVGPLCKADSLYVSAVDICGLFTNTSGTQQWKGLPRY
                     FKITLRKRSVKNPYPISFLLSDLINRRTQRVDGQPMIGMSSQVEEVRVYEDTEELPGD
                     PDMIRYIDEFGQTTTRMQ"
BASE COUNT      212 a    149 c    168 g    234 t
ORIGIN      
        1 cacagtgctg cttgatgagc agggtgttgg gcccttgtgc aaagctgaca gcttgtatgt
       61 ttctgctgtt gacatttgtg ggctgtttac caacacttct ggaacacagc agtggaaggg
      121 acttcccaga tattttaaaa ttacccttag aaagcggtct gtgaaaaacc cctacccaat
      181 ttcctttttg ttaagtgacc taattaacag gaggacacag agggtggatg ggcagcctat
      241 gattggaatg tcctctcaag tagaggaggt tagggtttat gaggacacag aggagcttcc
      301 tggggatcca gacatgataa gatacattga tgagtttgga caaaccacaa ctagaatgca
      361 gtgaaaaaaa tgctttattt gtgaaatttg tgatgctatt gctttatttg taaccattat
      421 aagctgcaat aaacaagtta acaacaattg cattcatttt atgtttcagg ttcaggggga
      481 ggtgtgggag gttttttaaa gcaagtaaaa cctctacaaa tgtgatatgg ctgatcatga
      541 acagactgtg agggctgagg ggcctgaaat gagccttggg actgtgaatc aatgcctgtt
      601 tcatgccctg agtcttccat gttcttctcc ccaccatctt catttttatc agcattttcc
      661 tggctgtctt catcatcatt atcactgttt cttagccaat ctaaaactcc agttcccata
      721 gccacattaa acttcatttt ttgatacact gacaaactaa act
//