From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Cyanophora paradoxa transfer RNA-Asn (trnN) gene, 3' end; transfer
Date: 9 Apr 92 10:02:41 GMT
Distribution: bionet
Checksum: 47251     6

LOCUS       CPALNAA      2153 bp ds-DNA             PLN       09-APR-1992
DEFINITION  Cyanophora paradoxa transfer RNA-Asn (trnN) gene, 3' end; transfer
            RNA-Leu (trnL) gene; FA/FB (psaC) gene, complete cds; ORF243,
            complete cds; ORF162, 3' end.
ACCESSION   M86239
KEYWORDS    FA/FB protein; transfer RNA-Asn; transfer RNA-Leu.
SOURCE      Cyanophora paradoxa (library: LB 555 UTEX) DNA.
  ORGANISM  Cyanophora paradoxa
            Eukaryota; Chromophycota; Cryptophyceae; Cryptomonadales;
            Kathablepharidaceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Rhiel,E., Stirewalt,V.L., Gasparich,G.E. and Bryant,D.A.
  TITLE     The psaC genes of Synechococcus sp. PCC7002 and Cyanophora
            paradoxa: cloning and sequence analysis
  JOURNAL   Gene 112, 123-128 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     tRNA            1..39
                     /anticodon=(pos:1..3, aa:Asn)
                     /product="transfer RNA-Asn"
                     /gene="trnN"
                     /partial
     tRNA            complement(123..204)
                     /anticodon=(pos:168..170, aa:Leu)
                     /product="transfer RNA-Leu"
                     /gene="trnL"
     RBS             359..365
     CDS             372..617
                     /function="terminal electron acceptor for photosystem I
                     reaction center"
                     /product="FA/FB protein"
                     /gene="psaC"
                     /codon_start=1
                     /translation="MAHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCRANQIASAPR
                     TEDCVGCKRCESACPTDFLSIRVYLGAETTRSMGLGY"
     stem_loop       670..724
                     /note="putative transcription terminator/mRNA stabilizer"
                     /note="stem loop 1"
     CDS             774..1505
                     /note="ORF243"
                     /codon_start=1
                     /translation="MNNKIDNFLKQKKLIKVISGLNNFNTTHVIKIAKAASKTNASFI
                     DIAAAPKLVEKVKKEVPNLPICVSAIKPELFVPCVKAGAELIEIGNFDSLYNQGYKIN
                     FSDVLSLVKQTRSLLPDTPLSVTIPYLLPLNLQLELAYRLEDLNVDLIQTEGKINKIT
                     SLLDNRNIETILPTLASTYLIANNVTIPVICASGLTISTIELPFKLNASGIGIGNAVS
                     KLNSTEEMINLLNEISTRINYSTVL"
     stem_loop       1518..1553
                     /note="putative transcription terminator/mRNA stabilizer"
                     /note="stem-loop 2"
     CDS             complement(1665..2153)
                     /note="homology to sequence downstream from the ruvB gene
                     of E. coli"
                     /note="ORF162"
                     /codon_start=1
                     /translation="VDLNHFLFGNILGITSEDLQNTSIILAIILLFFISCYRQLKCYT
                     FDPIMAQTIGLPINFLQSTFLILVALTIIVSMKAIGVILVLALLVTPGATGLLIGKSL
                     EYVILTSSIIGVSCSFSGMLLSYLFNIPPGPTIVLITSLIFFILFLIINKKDSTTDSK
                     LF"
                     /partial
BASE COUNT      843 a    263 c    262 g    785 t
ORIGIN
        1 gttaaccgat tggtcgtagg ttcaagtcct acctggggag ttatttttat attaaattat
       61 ttttaatcag aaaaattatt attattaata ttaataatat taatttatta ttattattat
      121 tatgcggacg gagagactcg aactctcacg agcgaactca ctagatccta agtctagggc
      181 gtctaccaat tccgccacgt ccgcaatata atattattat tatatcaaat atttcttaat
      241 ttggataaat tatttcaaat aatttcttaa aaaaagagat agaagtttta agttatagta
      301 aaatagaata tatatattta tataataaat tcttaaattt atttaattaa ctctttttag
      361 gagaatttta aatggcacat accgtaaaaa tttacgacac ttgtattggt tgtacccaat
      421 gtgtacgtgc atgtcctact gatgtattag aaatggttcc ttgggatggt tgtcgtgcaa
      481 accaaatcgc ttctgctccg agaactgaag attgtgtagg ttgtaaaaga tgtgaatctg
      541 catgtcctac tgatttctta agtattcgtg tttacttagg tgcagaaact actcgtagta
      601 tgggtctagg ttattaagat aaagtatata ttcgtctaaa atatatatat tattttaatt
      661 aaatataaat ataagtaaat agtataattt tattttgtat ttaaaattat actatttact
      721 tatacttata tttcgaagta taagttaatt atttattata aaacttaaca attatgaata
      781 ataaaattga caatttttta aaacaaaaaa aattaattaa agttattagt ggattaaata
      841 attttaatac aacacatgtt atcaaaatag caaaagcagc aagtaaaaca aatgctagtt
      901 ttattgatat agctgctgct cctaagttag ttgaaaaagt aaaaaaagaa gtcccaaatt
      961 taccaatttg cgtatccgca attaaacctg aattatttgt tccatgcgtt aaagccggtg
     1021 cagaattaat tgaaataggt aatttcgaca gcttatataa tcaaggttat aaaattaatt
     1081 tttctgacgt tctttcactt gtaaaacaaa cccgttcttt attacctgat actcctttat
     1141 ctgtaacgat tccttattta ttaccattaa atttacaatt agaattagct tatcgattag
     1201 aagatttaaa cgttgattta atacaaaccg aaggaaaaat aaataaaatt acttctttac
     1261 tagataatcg taatatcgaa actatattac caacgttagc ttcaacatat ttaattgcaa
     1321 ataatgttac tatacctgta atttgtgctt cgggtttaac tatttctaca attgaattac
     1381 cttttaaatt aaatgcatct gggattggta ttggaaatgc cgtttctaaa ttaaattcta
     1441 cagaagaaat gataaatctt ttaaatgaaa tttctactag aattaattat tcaactgtct
     1501 tataaattaa ataaaaaaat tacctatcta tatttaaata tagataggta attaaaaaaa
     1561 aaaataaata ttatatttat aaactttttc tatttttcaa aaaattagta attttgtttt
     1621 ttaaattaaa atattaatta aaaacatttt taactataaa caaattaaaa taattttgaa
     1681 tcagtagttg aatctttttt atttattatt aaaaaaagaa tgaaaaaaat caaagatgta
     1741 attaaaacaa ttgtaggacc aggaggaata ttaaaaagat aacttaataa cattccagaa
     1801 aaactacaac ttaccccgat aatcgaactc gtaagaatta catattctaa actttttcct
     1861 attaataaac ctgtagctcc cggagtaact aataaagcta aaactaatat tacacctatt
     1921 gctttcatac ttacaataat tgttaaagcg actaaaatta aaaaagtaga ttgtaaaaag
     1981 ttaataggta atcctatagt ttgtgccatt atagggtcaa atgtataaca ttttaattgt
     2041 ctataacaac ttataaaaaa aagtaaaata attgctaaaa ttatagatgt attttgtaaa
     2101 tcttctgatg taattcctaa aatattacca aataaaaaat gattaaggtc gac
//