From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: rpmH=ribosomal large subunit protein 34...orf60K 3' of rnpA
Date: 3 Jan 93 22:21:59 GMT
Distribution: bionet
Checksum: 06286 6

LOCUS       S98408       1607 bp    DNA             UNA       24-NOV-1992
DEFINITION  rpmH=ribosomal large subunit protein 34...orf60K 3' of rnpA
            [Buchnera aphidicola, aphid endosymbiont, Genomic, 4 genes, 1607
            nt]
ACCESSION   S98408
KEYWORDS    .
SOURCE      Buchnera aphidicola aphid endosymbiont
  ORGANISM  Buchnera aphidicola
            Unclassified.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Lai,C.Y. and Baumann,P.
  TITLE     Genetic analysis of an aphid endosymbiont DNA fragment homologous
            to the rnpA-rpmH-dnaA-dnaN-gyrB region of eubacteria.
  JOURNAL   Gene 113, 175-181 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 98408] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2A.  The authors begin their
            numbering at -1.  The numbering descends.  Zero is not present in
            the numbering.
FEATURES             Location/Qualifiers
     CDS             49..192
                     /note="RpmH;  For the protein sequence (NCBI gibbsq
                     98409):  Method: conceptual translation supplied by
                     author.  This sequence comes from Fig. 2A."
                     /gene="rpmH"
                     /product="ribosomal large subunit protein 34"
                     /codon_start=1
                     /translation="MKRTFQPSILKRNRSHGFRTRMATKNGRYILSRRRAKLRTRLTV
                     SSK"
     CDS             206..550
                     /note="GTG start codon.  RnpA;  For the protein sequence
                     (NCBI gibbsq 98416):  Method: conceptual translation
                     supplied by author.  This sequence comes from Fig. 2A.
                     Author-given protein sequence differs from the conceptual
                     translation for reasons explained in citation"
                     /gene="rnpA"
                     /product="ribonuclease P"
                     /codon_start=1
                     /translation="MLNYFFKKKSKLLKSTNFQYVFSNPCNKNTFHINILGRSNLLGH
                     PRLGLSISRKNIKHAYRRNKIKRLIRETFRLLQHRLISMDFVVIAKKNIVYLNNKKIV
                     NILEYIWSNYQR"
     CDS             529..786
                     /note="nucleotides -718 to -729 were not translated by
                     authors.  Description: orf10K 5' of rpnA;  10 kda protein;
                      For the protein sequence (NCBI gibbsq 98410):  Method:
                     conceptual translation supplied by author.  This sequence
                     comes from Fig. 2A.
                     Author-given protein sequence is in conflict with the
                     conceptual translation"
                     /codon_start=1
                     /translation="MVKLSTIVVFCLTFFVSIYQNYISFFMPSNCRFYPTCSTYMILS
                     LRKFGVIKGIILTILRLFKHPLHQGGEDLVPLKIKDKSEY"
     CDS             789..1607
                     /partial
                     /note="Description: orf60K 3' of rnpA;  60 kda
                     inner-membrane-associated protein;  For the protein
                     sequence (NCBI gibbsq 98411):  Method: conceptual
                     translation supplied by author.  This sequence comes from
                     Fig. 2A."
                     /codon_start=1
                     /translation="MELQRNFFIFAFLFVSFLLWQAWQSQSLKKNKKNEETNSFFHLN
                     HKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLLETKSDFVYQA
                     QSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK
                     PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSS
                     DAKYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYL"
BASE COUNT      607 a    180 c    227 g    593 t
ORIGIN      
        1 gaatcttatt aattatattt aataaagtat attgaggtaa atattaaaat gaaacgaact
       61 ttccaaccat caatattaaa acgtaatcgt tcacatggat ttagaactcg gatggcaact
      121 aaaaatgggc gttatatttt gtcacgtaga cgtgcaaaat tgagaacgcg tttaactgtt
      181 tctagtaaat aataggttga atatagtgtt aaattatttt tttaaaaaaa aatcgaaatt
      241 gttaaaatct acaaattttc aatatgtttt tagtaatccc tgtaataaaa atacttttca
      301 cataaacata ttaggacgtt ctaatttatt aggacatcct agattaggtc ttagtatatc
      361 gcgtaaaaat attaaacatg catatagacg taataaaatt aaacgattaa ttcgagaaac
      421 ttttcgttta ttacaacata gattaatctc aatggatttc gttgttatag caaagaaaaa
      481 tattgtttat ttaaataata aaaaaatagt aaatatattg gagtatatat ggtcaaacta
      541 tcaacgatag ttgttttttg tttaactttt ttcgtttcga tttatcaaaa ttatattagt
      601 ttttttatgc cttcaaattg tcgtttttat cctacttgct caacatatat gattttatct
      661 ttgcgtaaat ttggagttat caaaggtata attttaacaa ttttacgttt atttaaatgt
      721 catccattgc atcaaggtgg agaagattta gtgcctttaa aaattaaaga taaaagtgaa
      781 tattaatgat ggaattacag cgtaattttt ttatttttgc ttttttgttt gtttcttttt
      841 tattatggca agcatggcag agtcaatctt taaaaaaaaa taaaaaaaat gaagaaacta
      901 attcgttttt tcatttgaat cataaaaaag aagataaaaa tcaaataatt attaaaaatg
      961 acgtacttcg tttagtgata aatatgtatg gaggtgatat agaagaagca agtttacttg
     1021 attataaaac tcaattaaat tctcctgaga atttgaaatt attagaaaca aaatctgatt
     1081 ttgtttatca ggctcaaagt ggattgattg gaaaagatgg tttagataat tcaattaata
     1141 aaattagacc attgtattct gcaaaaaaaa atttttttga attaggtcat aatgaaaaag
     1201 aattacgtgt tccaataact tttattgcca aaaatgggat aacgtatata aaaaatttta
     1261 tccttaaacc tggtaaatat aatgtagaag tagaatatga tattaataat ttgagtaata
     1321 aaaaattaga actaaatatt tttggacaac taaaacaaac tgttaaactg cctaaaaatc
     1381 gtgatattta tagtggtaat tttgcccttc agacttttcg tggtgctgct tattcaagtt
     1441 cagatgcgaa atatgaaaaa tataaatttg ataatatcgc taatcatgaa catcttcata
     1501 tcattactca tcatggttgg atcgccatgc tgcaacagta ttttgtagtt gcttgggtac
     1561 ctgatactaa catcagcagt tctaatataa tttatacatc ttatcta
//