From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian cytomegalovirus dbp gene for single-stranded DNA-binding
Date: 21 Jul 92 10:05:13 GMT
Distribution: bionet
Checksum: 37506     9

LOCUS       HSCDBPA      3780 bp ds-DNA             VRL       21-JUL-1992
DEFINITION  Simian cytomegalovirus dbp gene for single-stranded DNA-binding
            protein.
ACCESSION   D00750
KEYWORDS    dbp gene; nuclear single stranded DNA binding protein.
SOURCE      Simian cytomegalovirus (strain Colburn DB129), viral DNA, clone
            pDGA16.
  ORGANISM  Simian cytomegalovirus
            Viridae; ds-DNA enveloped viruses; Herpesviridae;
            Betaherpesvirinae.
REFERENCE   1  (bases 1 to 3780; 852 to 1166)
  AUTHORS   Anders,D.G. and Gibson,W.
  TITLE     Location, transcript analysis, and partial nucleotide sequence of
            the cytomegalovirus gene encoding an early DNA-binding protein with
            similarites to ICP8 of Herpes simplex virus type 1
  JOURNAL   J. Virol. 62, 1364-1372 (1988)
  STANDARD  simple staff_review
REFERENCE   2  (bases 1 to 3780)
  AUTHORS   Anders,D.G.
  TITLE     Nucleotide sequence of a cytomegalovirus single-stranded
            DNA-binding protein gene: comparison with alpha- and
            gammaherpesvirus counterparts reveals conserved segments
  JOURNAL   J. Gen. Virol. 71, 2451-2456 (1990)
  STANDARD  full staff_review
COMMENT     These data kindly submitted in computer readable form by:
            David G. Anders
            The Wadsworth Center for Laboratories and Research
            Suny at Albany, School of Public Health
            New York State Department of Health
            P.O. Box 509
            Albany, NY 12201-0509
            U.S.A.
            Phone:  (518) 474-8969
            Fax:    (518) 473-1326
FEATURES             Location/Qualifiers
     TATA_signal     198..203
     CDS             241..3723
                     /note="open reading frame for polypeptide"
                     /codon_start=1
                     /translation="MSNEELSALAPVGPAAYVYFTKTNHEMNEVLATLSLCDSSSPVV
                     IAPLLMGLTVDQDFCTSVRTPVVCYDGGVLTKVTSFCPFALYFYNTQGIVDFSEPHGD
                     VQRLCDETRQRYAIESYMPEEGRAPTDLAALCTAAGCDPQEVLVHVVVGNGMKEFMYA
                     GQLIPCFEEAAPTRLNDCDAVRVPLYPPTLFGSLQADVDSDELSLDKRSSFVESRGLY
                     VPAVSETLFYYVYTSWCQALRFSETKVLIEAALKQFVNDSQQSVKLAPHKKYFGYTSQ
                     KLSSLEKDHLMLSDAVICELGFSFASVFLDSAYGASDSMVYSEWPVVVNATDHRDLIR
                     ALTELKLHLSTHISALLFSCNSILYHNRLVYLTSNKNASGTGASQEVLLKSIHFANGL
                     TGLCEDTYNDARKLIKCSGVVAKDERYAPYHLSLICGTCPQLFSAFIWYLNRVSVYNT
                     GLTGSSTLSNHLIGCSSSLCGACGGTCCHTCYNTAFVRVQTRLPQMPRLPKKEPSVVV
                     MQSRFLNDVDVLGTFGRRYSAESKEASLDAKADEGSASTSNRTASSSVDRTHRLNRIL
                     DYCKKMRLIDSVTGEDTMTINGRSDFINLVSSLNKFVDDEAMSFVSEVRMKSNRDEVL
                     GATQAFNLDLNPFAVSFSPILAYEYYRVIFAIIQNVALITATSYIVDNPLTTSLVSRW
                     VTQHFQSIHGAFSTTSSRKGFLFIRNVKSSKNADHDRLPDFKLYARGTYSVISMEIKL
                     SRLSVPSLLMFRVKNRPISKASKGTTAHVFFRREHVPKKNPVKGCLGFLLYKYHDKLF
                     PDCGFSCLQFWQKVCANALPKNVNIGDMGEFNNFVKFVISVTADYNEHDLIDVPPDCM
                     LNYLENRFHNKFLCFYGFKDYIGTLHGLTTRLTYQNHAQFPYLLGESPNFASAADFAL
                     RLKDLKATGVTAPLASTVTRESLMRTIFEQRSLVTVSFSIEKYAGVNNNKEIYQFGQI
                     GYFSGNGVERSLNTNSIGGQDYKFMRQRCILATKLSDVLIKRSRRDNVLFDEDIIKNR
                     VMAALDSENLDVDPELMAMYEILSTREEIPERDDVLFFVDGCQAVADSLMEKFSRLQE
                     MGVDDFSLVNLQQVLDSRPECGGGGGEVHDLSALFTAASGEAVGNSVGLNARGGEHAF
                     DEDCGLLPAKRGRL"
     polyA_signal    3722..3727
BASE COUNT      786 a   1008 c   1050 g    936 t
ORIGIN      approx. 0.4 genome % units
        1 caccgagcat cacgctattt tcggaagcgc ctttggagga cagttcgccg agccggcggc
       61 gggtggcgcg gggtgtgttt gggtcgcaaa tcgggcgcat aaccgtcgga gggggcggcg
      121 cgcgtcgggg acagtgtgca gttccttgct ggtggtctac gtattgcgtc aactatgacg
      181 tcttagcccc tcctaggtat aaagttcact tggtattacc gtagtcgtta cacgaccacc
      241 atgagcaacg aggaactcag tgctctcgct cccgtgggtc cggcggccta tgtatacttt
      301 accaaaacca accatgaaat gaacgaggtt ttagccacgt tatcgctgtg cgattcttct
      361 tcgcccgtgg tgatcgcccc gctcttgatg gggctcaccg tcgatcaaga tttctgtacc
      421 tcggttcgca ccccggtcgt gtgttacgac ggtggggtgc tcaccaaggt gacgtctttc
      481 tgtccctttg ctctgtattt ctacaacact caggggatcg tggatttctc ggagccgcat
      541 ggtgacgtac aacggctgtg tgacgaaacg cgtcaaagat acgccattga gagctacatg
      601 ccggaagaag gacgtgcccc caccgacctt gcggccctct gcacggccgc cgggtgcgat
      661 cctcaagagg tgttggtgca cgtcgtcgtg ggcaacggca tgaaagagtt catgtatgcg
      721 ggccagctca tcccgtgctt cgaggaggcg gcgcccactc gactgaacga ttgcgacgcg
      781 gtgcgcgtcc cgctgtatcc tcccaccctc tttggttctt tgcaggccga tgtggattct
      841 gacgagctgt ctctagacaa gcgcagctcg ttcgtggaat ctcggggatt gtacgtgcct
      901 gcggtgagcg aaaccctgtt ctactatgtt tacacttcgt ggtgccaggc cctgcgcttc
      961 tcagagacca aggtgctgat cgaagcggcc ctgaagcagt tcgtgaacga cagccagcag
     1021 tccgtgaagc tggctccgca caagaagtac ttcgggtaca cgagccagaa gctgagcagt
     1081 ctggagaaag accacttaat gctcagcgac gccgtgatct gcgagctggg gttcagcttc
     1141 gcctcggtgt ttctggactc ggcctacggg gcatcggatt ccatggttta ctcggaatgg
     1201 cctgtcgtgg tgaacgccac ggatcatcgt gatctcatcc gagctctcac cgagctcaaa
     1261 ttgcatctct ctacccatat tagtgcactg ctgtttagtt gtaattctat tctgtatcat
     1321 aatcggcttg tgtatctcac ttccaacaag aacgctagcg gtaccggagc cagccaggag
     1381 gtgctcctga agtctattca cttcgccaac ggcctgacgg ggctgtgcga agacacgtat
     1441 aacgacgcca ggaaactgat caagtgttct ggcgtggttg ccaaggacga acgttatgcg
     1501 ccgtatcacc tgtccctcat ctgcggtacg tgtcctcaac ttttctctgc tttcatatgg
     1561 tacctcaatc gagtttctgt ttacaatacc gggttgacag ggtcttcgac tttgagtaat
     1621 catttaatcg gttgttcgtc tagtctgtgt ggggcctgtg gtgggacatg ttgtcatacc
     1681 tgttataaca cggcattcgt gcgggtacag acccgtctgc ctcagatgcc gaggctcccg
     1741 aagaaggagc cctccgtcgt ggtcatgcaa tctcgatttc tcaacgatgt ggatgtgctg
     1801 ggtacgttcg gacgccgcta tagcgcggag tctaaagaag cgagtctaga cgcgaaagcc
     1861 gacgagggtt ccgcgtcgac gtctaatcgc accgcgagct cgagcgtgga ccgcacccat
     1921 cgtctcaacc gcatcttgga ctattgtaaa aaaatgagac tcatagactc ggttacgggt
     1981 gaagacacca tgactatcaa cggcaggagc gattttatta atctggtgtc ctcgcttaat
     2041 aagtttgtag acgacgaagc catgagcttc gtgtccgagg tccgtatgaa aagtaatcgc
     2101 gacgaggttt taggcgctac gcaggccttc aacctcgatc tcaacccttt cgccgtttcg
     2161 ttcagtccca ttcttgcgta tgagtactat cgggtgattt tcgccatcat tcagaacgtc
     2221 gccctgatca cggccacgtc ctacattgta gacaaccccc tcaccacgag tttggtttcc
     2281 cggtgggtga ctcaacactt ccagtctatc cacggggctt tttccaccac ttcctcccga
     2341 aagggttttc tctttattag gaatgtgaaa tcctcaaaaa acgcggatca tgaccgcctc
     2401 cccgacttta aactctatgc ccgcggcacg tactcggtca tctccatgga gatcaagctc
     2461 tcccgcctct ctgtccctag tctgctcatg ttcagggtca aaaaccgccc catctctaag
     2521 gctagcaagg gtacgacggc tcacgtgttt tttcgccgcg agcacgtacc taagaaaaat
     2581 ccagtcaagg gctgtttggg ctttctgctc tacaagtatc atgataagtt atttcccgat
     2641 tgcgggttct catgtttaca gttctggcaa aaagtgtgtg ccaacgcact gcccaaaaac
     2701 gtgaatatcg gggacatggg ggagttcaac aattttgtca agttcgtcat ctcggtcacc
     2761 gccgattata acgagcatga cctgattgac gtgccgcccg attgcatgct taactatctg
     2821 gagaaccgat ttcacaacaa gttcctttgt ttttacgggt ttaaagatta cataggcacg
     2881 ttgcacggcc tgacaacgag gctaacgtat cagaatcacg cccagtttcc ctacctcttg
     2941 ggcgagagtc ccaattttgc gtcagctgcc gattttgccc tgcgcttaaa ggatctcaaa
     3001 gcgaccggcg ttacggcgcc gctggcgtct acggttacgc gagagtcctt gatgcgcacc
     3061 atttttgagc aacgctccct ggtgactgtg agtttttcca ttgagaagta cgcgggggtg
     3121 aacaacaaca aggaaattta ccagtttggg cagattgggt acttttcggg caacggggtg
     3181 gagcgcagcc tgaataccaa ttccataggg ggtcaggatt ataaattcat gcgtcagcgc
     3241 tgtatcctgg ccaccaaact ctcagacgtt ctcatcaagc gttcacggcg cgataacgtg
     3301 ctgtttgacg aggacattat caagaacagg gtcatggcgg ccctggattc ggagaacctg
     3361 gatgttgatc ccgagctcat ggctatgtac gagatactga gcactcggga ggagattccc
     3421 gagcgggacg atgttttgtt ttttgtagat ggatgtcagg ccgtggccga ttccctgatg
     3481 gagaagtttt cgcgcttgca ggagatggga gtggacgact tttccctggt gaatctgcag
     3541 caggtgctgg acagccggcc ggagtgcggc ggcggcgggg gcgaggttca cgacctgtcg
     3601 gcgctgttta ccgccgcctc cggggaggcg gtgggcaact ctgtgggcct gaacgcgcgc
     3661 gggggggagc acgcctttga cgaggattgt ggtctgttgc cggccaagag aggccgcctg
     3721 taataaacgc cgtgcacgcc gttatatatt aacgtcggtg tgcacggcac actgcagagc
//