From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Canine coronavirus cDNA to genomic RNA.
Date: 13 Jan 93 05:46:03 GMT
Distribution: bionet
Checksum: 54630 13

LOCUS       CCOINSAVC    9580 bp ss-RNA             VRL       13-JAN-1993
DEFINITION  Canine coronavirus cDNA to genomic RNA.
ACCESSION   D13096
KEYWORDS    .
SOURCE      Canine coronavirus (individual_isolate INSAVC-1) cDNA to genomic
            RNA.
  ORGANISM  Canine coronavirus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Coronaviridae.
REFERENCE   1  (bases 1 to 9580)
  AUTHORS   Horsburgh,B.C., Brierley,I. and Brown,T.K.
  TITLE     Analysis of a 9.6kb sequence from the 3' end of canine coronavirus
            genomic RNA
  JOURNAL   J. Gen. Virol. 73, 2849-2862 (1992)
  STANDARD  full automatic
COMMENT     Submitted (27-Aug-1992) to DDBJ by: Brian C. Horsburgh Department
            of Rathology University of Cambridge Tennis Covet Road Cambridge
            U.K. Phone:  0223-33-6918 Fax:    0223-33-6926.
BASE COUNT     2958 a   1631 c   1900 g   3091 t
ORIGIN      
        1 tccccaacac aaagtcaatt gacggtgaaa acacgtcaaa agatggtttc tttacctatg
       61 ttaatggttt tattaaagag aaactatcgc ttggtggatc tgccgccatc aaaatcactg
      121 aatttagttg gaataaagat ttatatgaat tgattcaaag atttgagtat tggactgtgt
      181 tttgtacaag tgttaatacc tcttcatcag aaggatttct gattggtgtt aactacttag
      241 gaccatactg tgacagggct attgtagacg gaaatataat gcatgccaat tatatatttt
      301 ggagaaattc tacaattatg gctctatcac ataactcagt cctagacact cccaagttca
      361 agtgtcgttg taataacgca cttattgtta atttaaaaga aaaagaattg aatgaaatgg
      421 tcattggatt actaaagaaa ggtaagttgc tcattagaaa caatggtaaa ctactaaact
      481 ttggtaatca cttggttaat gtgccatgat tgtgcttaca ttgtgccttt tcttgttttt
      541 gtacagtagt gtgagctgta catcaaacaa tgactgtgta caagttaatg tgacacaact
      601 gcctggcaat gaaaatatta tcaaagattt tctatttcag aactttaaag aagaaggaag
      661 tttagttgtt ggtggttatt accccacaga ggtgtggtat aactgttcca caactcaaca
      721 aactaccgct tataagtatt ttagtaatat acatgcattt tattttgata tggaagccat
      781 ggagaatagt actggcaatg cacgtggtaa acctttacta gtacatgttc atggtaatcc
      841 tgttagtatc attgtttaca tatcagctta tagagatgat gtgcaattta ggccgctttt
      901 aaagcatggt ttattgtgta taactaaaaa tgacaccgtt gactataata gctttacaat
      961 taaccaatgg cgagacatat gtttgggtga cgacagaaaa ataccattct ctgtagtacc
     1021 cacagataat ggtacgaaat tatttggtct tgagtggaat gatgactatg ttacagccta
     1081 tattagtgat gagtctcacc gtttgaatat caataataat tggtttaaca atgttacact
     1141 cctatactca cgtacaagca ccgccacgtg gcaacacagt gctgcatatg tttatcaagg
     1201 tgtttcaaat tttacttatt acaagttaaa taaaaccgct ggcttaaaaa gctatgaatt
     1261 gtgtgaagat tatgaatact gcactggcta tgcaaccaat gtgtttgctc cgacatcagg
     1321 tggttatata cctgatggat tcagttttaa caattggttt atgcttacaa acagctccac
     1381 ttttgttagt ggcagatttg taacaaatca accgctgcta gttaattgct tgtggccagt
     1441 gcccagtttt ggcgtcgcag cacaagaatt ttgttttgaa ggtgctcagt ttagccaatg
     1501 taacggtgtt tctttaaata atacagtaga tgttattaga tttaacctta atttcactac
     1561 agatgtacaa tctggcatgg gtgctacagt attttcactg aatacaacag gcggtgtcat
     1621 tcttgagatt tcttgttata atgacacagt gagtgagtcg agtttctaca gttatggtga
     1681 aattccattc ggcgtaactg atggaccacg ttactgttat gtactctaca atggcacagc
     1741 tcttaagtat ttaggaacat taccacctag tgtcaaggaa attgctatta gtaagtgggg
     1801 acatttttat attaatggtt acaatttctt tagcacgttt cctattgatt gtatagcttt
     1861 taatttaacc actggtgcta gtggagcatt ttggacaatt gcttatacgt cgtacacaga
     1921 agcattagta caagttgaaa acacagctat taaaaaggtg acgtattgta acagtcacat
     1981 taataacatc aaatgttctc aacttactgc taatttgcaa aatggttttt accctgttgc
     2041 ttcaagtgaa gttggtcttg tcaataagag tgttgtgtta ctacctagtt tctattcaca
     2101 taccagtgtt aatataacta ttgatcttgg tatgaagcgt agtgttacgg tcaccatagc
     2161 ctcaccatta agtaacatca cataccatgc aggtaataac atagacgtgt actgtattcg
     2221 ttctaaccaa ttctcagttt atgttcattc cacttgcaaa agttctttat gggataacaa
     2281 ttttaattca gcatgtaccg acgttttaga cgccacagct gttataaaaa ctggtacttg
     2341 tcctttctca tttgataaat tgaataatta cttaactttt aacaagttct gtttgtcgtt
     2401 gaatcccgtt ggtgccaact gtaagttaga tgttgccgcc cgtacaagaa ccaatgagca
     2461 ggtttttgga agtttatatg taatatatga agaaggagac aacatagtgg gtgtaccgtc
     2521 tgataatagt ggtttgcacg atttgtcagt gttgcactta gactcttgta cagattacaa
     2581 tatatatggt agaactggtg ttggtattat tagaaaaact aacagcacac tacttagtgg
     2641 cttatattac acatcactat caggtgattt gttaggtttt aaaaatgtta gtgatggtgt
     2701 tgtctactct gtaacgccat gtgatgtaag tgcacaagct gctgttattg atggtgccat
     2761 agttggagct atgacttcca ttaatagtga actgttaggt ctaactcatt ggacaacaac
     2821 acctaatttt tattactact ccatatataa ttatacaaat gtgatgaatc gtggcacggc
     2881 aattgataat gatattgatt gtgaacctat cataacatat tctaatatag gtgtttgtaa
     2941 aaatggagct ttggttttta ttaacgtcac acattctgat ggagacgttc aaccaattag
     3001 caccggtaat gtcacgatac ccacaaattt tactatatct gtgcaagtcg aatatattca
     3061 ggtttacact acaccagttt caatagactg tgcaagatac gtttgcaatg gtaacccaag
     3121 atgcaataag ttattaacac aatacgtttc tgcatgtcaa actattgagc aagcgcttgc
     3181 aatgggtgcc agacttgaaa acatggagat tgattccatg ttatttgttt cggaaaatgc
     3241 ccttaaattg gcatctgttg aagcattcaa tagtacggaa aatttagacc ctatttataa
     3301 agaatggcct aacattggtg gttcttggct aggaggttta aaagatatat tgccatctca
     3361 taatagcaaa cgtaagtacc gctcggctat agaagacttg ctttttgata aggttgtaac
     3421 atctggctta ggtacagttg acgaagatta caaacgttct gcaggtggtt atgacatagc
     3481 tgacttagtg tgtgcacgat attacaatgg catcatggtg ctacctggtg tagctaatga
     3541 tgacaagatg actatgtaca ctgcatctct tacaggtggt ataacattag gtgcacttag
     3601 tggtggcgca gtggctatac cttttgcagt agcagttcag gctagactta attatgttgc
     3661 tctacaaact gatgtattga acaaaaacca acaaatcttg gctaatgctt tcaatcaagc
     3721 tattggtaac attacacagg catttggtaa ggttaatgac gctatacatc aaacatcaaa
     3781 aggtcttgct actgttgcta aagcattggc aaaggtgcaa gatgttgtta acacgcaagg
     3841 tcaagcttta agccacctaa cagtacaatt gcaaaacaat tttcaagcca ttagcagttc
     3901 tattagtgac atttataaca ggcttgatga attgagtgct gatgcacaag ttgacaggct
     3961 gattacagga cgacttacag cacttaatgc atttgtgtct cagactttaa ccagacaagc
     4021 agaggttagg gctagtagac aacttgctaa agacaaggtt aatgaatgcg ttaggtctca
     4081 atcccagaga tttggattct gtggtaatgg tacacatttg ttttcacttg caaatgcggc
     4141 accaaatggc atgattttct ttcacacagt gctattacca acagcttatg aaactgtgac
     4201 ggcctggtca ggtatttgtg cgtcagatgg cagtcgcact tttggacttg ttgttgagga
     4261 tgtccagctg acgctatttc gcaatttaga tgaaaaattt tatttgacgc ccagaactat
     4321 gtatcagccc agagttgcaa ctagttctga ttttgttcaa atagaaggct gtgatgtgtt
     4381 gtttgttaat ggaactgtaa ttgaattgcc tagtatcata cctgactata tcgatattaa
     4441 tcaaactgtt caggacatat tagaaaattt cagaccaaat tggactgtac ccgagttgcc
     4501 acttgacatt tttcatgcaa cctacttaaa cctgactggt gaaattaatg acttagaatt
     4561 taggtcagaa aagttacata acaccacagt agaacttgct attctcattg ataatattaa
     4621 taacacatta gtcaatcttg aatggctcaa cagaattgaa acttatgtaa aatggccttg
     4681 gtatgtttgg ctactaattg gattagtagt aatattctgc atacccatat tgctattttg
     4741 ttgttgtagt actggttgtt gtggatgtat cgggtgttta ggaagctgtt gtcattccat
     4801 atgtagtaga ggccaatttg aaagttatga acctattgaa aaagttcatg ttcactgaat
     4861 tcaaaatgtt aagtctacta ttttaattac acccttggca acacaagtga tataaaggtg
     4921 gtgtcgtaat tcataccagt caattttagc attaataaaa cacacttcta tggctggtaa
     4981 taccggttat atataatgtg tttttaattt ttaagaacta aacttatgag tcattacagg
     5041 tcttgtatgg acattgtcaa atctattgac acatccgtag acgctgtact tgacgaattt
     5101 gattgcgcat actttgctgt aactcttaaa gtagagttca agactggtaa gcaacttgtg
     5161 tgtataggtt ttggtgatac acttttagag gctaaggaca aagcatatgc taaacttggt
     5221 ctctctatta ttgaagaagt caatagtcat acagttgttt gatattactg tttataagtt
     5281 taaggccaaa ttttggtaca aattaccttt tgaaactaga cttcgtatca ttaaacacac
     5341 aaaacctaaa gcattaagtg ctacaaaaca agtaaagaga gattatagaa aaactgccat
     5401 tctaaattcc atgagaaaat gattggtgga ctttttctta acactctgag ttttgtaatt
     5461 gttagcaacc atgtcattgt taacaataca gcaaatgtgc atcacacaca ataagaccat
     5521 gttatagtac aacaacatca gtttgttagt gctagaacac aaaattacta cccggagttc
     5581 agcattgctg tactctttgt atcctttcta gctttgtacc gtagtacaaa ctttaagacg
     5641 tgtgtcggta tcttaatgtt taagattgta tcaatgacac ttataggacc tatgcttata
     5701 gcatttggtt actacattga tggcattgtt acaacaattg tcttagcttt aagatttatt
     5761 tacgtatcat atttctggta tgttaataat agatttgaat tcattttata caatacgacg
     5821 acactcatgt ttgtacatgg cagagctgca ccgtttatga gaagttctca cagctctatt
     5881 tatgtcacat tgtacggtgg cataaattat atgtttgtga atgacctcac gttgcatttt
     5941 gtagacccta tgcttgtaag catagcaaca cgtggcttag ctcatgctga tctaactgtt
     6001 gttagagcag ttgaacttct caatggtgat tttatttatg tattttcaca ggagcccgta
     6061 gtcggtgttt acaatgcagc cttttctcag gcggttctaa acgaaattga cttaaaagaa
     6121 gaagaagaag accatatcta tgacgttccc tcgggcattg actgtcatag atgacaatgg
     6181 aatggtcatt agtatcattt tctggttcct gttgataatt atattgatat tattttcaat
     6241 agcattgcta aatataatta agctatgcat ggtatgttgc aatttaggaa gaacagttat
     6301 tattgttcca gctcgacatg cctatgatgc ctataagaat tttatgcaaa ttagagcata
     6361 caaccctgat gaagcactcc ttgtttgaac taaacaaaat gaagaaaatt ttgtttttac
     6421 tagcgtgtgc aattgcatgc gtctatggag aacgctattg tgccatgact gaaagttcta
     6481 cgtcatgtcg taatagcacg gctggcaact gtgcttcatg cttcgaaaca ggtgatctta
     6541 tttggcatct tgcaaactgg aacttcagct ggtctgtaat attgatcatt tttataacag
     6601 tgttacaata tggaagacct caatttagct ggttcgtgtg tggcattaaa atgcttatta
     6661 tgtggctgtt atggcccatt gttttagctc ttacgatttt taatgcatac ctggaatacc
     6721 gagtttccag atatgtaatg ttcggcttta gtgttgcagg tgcaactgtt acatttatac
     6781 tttggattat gtattttgtt agatccattc agttatacag aaggactaag tcttggtggt
     6841 ctttcaaccc tgaaactagc gcaattcttt gcgttagtgc gttaggaaga agctatgtgc
     6901 ttcctcttga aggtgtgcca actggtgtca ctctaacatt gctttcaggg aatttgtgtg
     6961 ctgaagggtt caaaattgca ggtggtatga acatcgacaa tttaccaaaa tatgtaatgg
     7021 ttgcattacc tgtcagaacc atagtctaca cacttgttgg caagaaattg aaagcaagta
     7081 gtgcaacagg atgggcttac tatgtaaagt ctaaagctgg tgattactca acagatgcac
     7141 gaactgataa tttgagtgag catgaaaaat tattacatat ggtataacta aacttctaaa
     7201 tggcctctca gggacaacgt gtcagttggg gagatgaatc caccaagaga cgcggtcgtt
     7261 ctaattctcg tggccggaag aataatgata tacctctttc attcttcaac cccattaccc
     7321 tcgagcaagg atcaaagttt tgggacttat gtccgagaga ctttgtaccc aaaggaatag
     7381 gtaataagga tcaacaaatt ggttattgga acaggcaaac ccgttatcgc atggtgaagg
     7441 gtcgacgtaa aaatcttcct gaaaagtggt tcttctacta tttaggaact ggacctcatg
     7501 ctgatgccaa atttaagcaa aaattagatg gagttgtctg ggttgctagg ggagattcca
     7561 tgactaagcc aacaactctt ggtactcgtg gcactaataa tgaatcaaag gctttgaaat
     7621 tcgatgtcaa agtaccatca gaatttcacc ttgaagtgaa ccaattaagg gacaattcaa
     7681 ggtctaggtc tcaatctaga tctcagtcca gaaataggtc tcaatctaga ggaaggcaac
     7741 tatccaataa taagaaggat gacaatgttg aacaagctgt tcttgctgca ctcaaaaagt
     7801 taggtgttga cacagaaaaa caacaaagat ctcgttccaa atctaaggaa cgtagcagct
     7861 ctaagacaag agatactaca cctaagaatg aaaacaaaca cacctggaag agaactgcag
     7921 gtaaaggtga tgtgacaaaa ttttatggag ctagaagtag ttcagccaat tttggtgaca
     7981 gcgatcttgt tgccaatggg aacggtgcca agcattaccc acaactggct gaatgtgttc
     8041 catctgtatc tagcattctg tttggaagcc attggactgc taaggaagat ggtgaccaga
     8101 ttgaagtcac attcacacac aaataccact tgccaaagga tgatcctaag actggacaat
     8161 tccttcagca gattaatgca tacgcccgtc catcagaggt ggctaaagaa cagagacaac
     8221 gcaaagctcg ttctaaatct gtagaaaggg tagagcaaga ggttgtacct gatgcattaa
     8281 cagaaaatta cacagatgtg tttgatgaca cacaggttga gattattgat gaggtaacga
     8341 actaaacgaa tgctcgtttt cctccatgct gtgtttatta cagttttaat cttactacta
     8401 attggtagac tccaattatt agaaagatta ttacttaatc actctcttaa tcttaaaact
     8461 gtcaataatg ttttaggtgt ggactcacac tggctaaaag taaattgctt acagctcttg
     8521 aaaccagact gtcttgattt taacatctta cataggagtt tggcagaaac cagattacta
     8581 aaagtagtac ttcgagtaat ctttctagtt ctactagggt tttgctgcta tagattgtta
     8641 gtcacattat tttaacatca tgaagtttgt gattcttgtg ttgtgtcttt cttttgtgaa
     8701 tggatatgga atcaaaagaa atgtgcaaga acatgaccta aaagattccc atgagcatcc
     8761 aaccatgaca tgggaactat tagaaaaatt tgttggaaac accctttaca tcacaacacc
     8821 tcaagtgctt gcactaccat taggtgcaca aatatattgt gatgaaattg aaggatttca
     8881 atgttcttgg ccaggttata aaaattatgc ccatgatcat actgattttc atttcaatcc
     8941 ctctaatcca ttctattcct ttgtggatac tttttatgtt tccttaggtg atagtgcgga
     9001 taaaatttat cttagagtga ttagtgcaac atctagagag aaaatgttga atattggttg
     9061 tcacacatct ttctcagtaa accttccaat tggaactcag atttaccatg acaaggacat
     9121 gaaacttctt gtcgaaggaa gacatcttga gtgtgctcac agaatttact ttgtgaagta
     9181 ttgtccatac catacacatg ggtattgctt tgatgacaag ctaaaggtct atgatctgaa
     9241 gcgtgtcaaa agcaggaagg attttgagaa aatcagccaa tatcagaaaa gtgagttgta
     9301 aggccacccg atgtttaaaa tggtttttcc gaggaattac tggtcatcgc gctgtctact
     9361 cttgtacaga atggtaagcc aagtgtcaat aggaggtaca agcaacctat tgcatattag
     9421 gaagtttaga tttgatttgg caatgctaga tttagtaatt tagagaagtt taaagagtcc
     9481 gtatgacgag ccaacaatgg aagagctaac gtctggatct agtgattgtt taaaatgtaa
     9541 aattgtttga aaattttcct tttgatagtg attcaccaaa
//