From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bovine rotavirus outer capsid protein (VP4) mRNA, complete cds.
Date: 28 Jan 93 05:48:18 GMT
Distribution: bionet
Checksum: 22274 6

LOCUS       ROBVP4A      2352 bp ss-mRNA            VRL       27-JAN-1993
DEFINITION  Bovine rotavirus outer capsid protein (VP4) mRNA, complete cds.
ACCESSION   M92986
KEYWORDS    outer capsid protein.
SOURCE      Bovine rotavirus (strain B223) cDNA to mRNA.
  ORGANISM  Bovine rotavirus
            Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Hardy,M.E., Gorziglia,M. and Woode,G.N.
  TITLE     Amino acid analysis of bovine rotavirus B223 reveals a unique outer
            capsid protein VP4 and confirms a third bovine VP4 type
  JOURNAL   Virology 191, 291-300 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             10..2328
                     /function="heamagglutinin protease-sensitive, attachment"
                     /gene="VP4"
                     /evidence="EXPERIMENTAL"
                     /citation=[1]
                     /product="outer capsid protein"
                     /codon_start=1
                     /translation="MRSLIYRQLLYNSYSVDLSDEITNIGAQKKENVTVQLGEFAQSQ
                     YAPVSWGSGETLSGNVQQQTLDGPYAPDSSNLPSNCWYLVNPSNDGVVFSVTDNSTFW
                     MFTYLVLPNTAQTNVTVNVMNETVNISIYNSGSTYRFVDYIKTSSTQAYGSRNYLNTA
                     HRLQAYRRDGVGNISNYWGADTQGDLRVGTYSNPVPNAVINLNADFYVIPDSQQETCT
                     EYIRGGLPAMQTTTYVTPISYAIRSQRIARPNEDIIISKASLWKEVQYNRDIVIRFVF
                     ANNIIKAGGLGYKWSEISYKANNYQYTYMRDGVEVVAHTTVSVNGVSVYNYNTGPLPT
                     DFMIRNYDVLKESSFVYVHYWDDSQAFRNMVYVRALNAELNQVRCEGGHYPFALPVGS
                     WPVSQGGSVILTFDGVTLSTQFTDYVSLNSLRFRFRCAVSEPSFRVTGTRISNLYGLP
                     AANPLGDQQYYEAAGRFSLILLVPSNDDYQTPIANSVTVRQDLERQLDEMRREFNELS
                     ANIALSQLIDLALLPLDMFSMFSPIQSTVEAAKTFATSVMKKFRKSDLAKSVNSLTDA
                     ITDAAGSISRSSTLRSVNSAASVWTDISDILDSTDNVVAATATAAAKKFRVKEFTTEF
                     NGVSFDDISAAVVKTKMSKLNVVDEEILPQIITEASEKFIPNRAYRLIDGEKVYEVTT
                     EGKYFAYLTETFEEVVFDAERFAELVTDSPVISAIIDFKTIKNLNDNYGITREQALNM
                     LRSDPKVLRSFINQNNPIIKNRIEQLILQCRI"
BASE COUNT      782 a    381 c    540 g    649 t
ORIGIN      
        1 ggctttataa tgcgttcgct aatatacaga cagctactct ataactcata ttcagtggat
       61 ttatcggacg aaataactaa tataggtgca caaaagaaag agaatgtgac tgtgcagctt
      121 ggtgaattcg ctcaaagtca atacgcaccg gtttcatggg gatcaggaga gacattaagt
      181 ggaaatgttc aacaacagac tttagatggg ccatatgcac cagatagctc gaacttgccg
      241 tctaactgtt ggtatttagt caatccatca aatgatggtg tggtgttttc agtgacggat
      301 aacagcacgt tttggatgtt tacttattta gtcttgccaa atacagctca gactaatgtc
      361 acagtaaatg tgatgaatga gacggtgaat atatcaatat acaattcggg ttcgacgtac
      421 aggttcgtgg attacattaa gactagttcc acacaagcgt atgggtcgag gaactatctg
      481 aatactgcac atagattgca agcttacaga agagatggag tagggaatat atcaaattac
      541 tggggtgcgg atacacaagg tgatttgagg gttggaacgt attctaatcc ggtgccaaat
      601 gcagtgatca atttaaatgc agatttttac gtcataccag attcgcaaca agagacatgt
      661 acagaataca taaggggagg attgccagct atgcaaacta caacttacgt gacaccaatt
      721 agttatgcta ttagaagtca aagaattgcg agaccgaatg aagacataat catatcaaag
      781 gcatcactat ggaaagaggt tcaatataat agagacatcg tgataagatt tgtgtttgca
      841 aataatataa ttaaagcagg tggacttggt tataaatggt cagagatatc atataaagct
      901 aataactacc aatatacata tatgagagac ggcgtagaag ttgttgctca tactactgtt
      961 tcagtaaacg gtgttagcgt gtataattat aacactggac cattaccaac tgatttcatg
     1021 atacgaaact atgatgtttt gaaagaaagt tcgttcgtat atgttcatta ttgggacgat
     1081 tcacaggctt ttagaaatat ggtatatgtg cgtgcgctga atgcggaact aaatcaagtg
     1141 cggtgcgaag gaggtcatta tccgttcgca ctgcctgttg gctcatggcc ggtgagtcaa
     1201 ggagggagtg tgattctaac atttgatggt gtaacgttat caacgcaatt tactgactat
     1261 gtgtcgttga actcactaag gttcagattt agatgtgcag taagcgaacc ttcgtttagg
     1321 gttaccggta cgaggatatc aaatttgtat ggccttccag ccgcgaaccc attgggagac
     1381 caacaatatt atgaggcagc aggtaggttt tcattgatat tgttagtgcc aagtaatgat
     1441 gactaccaaa ctccaattgc aaattcagtc actgtaagac aggatctaga gagacagcta
     1501 gatgaaatga gaagagaatt caatgaacta tcagctaata tagctttgtc acagctaata
     1561 gatttagcac tattgccact tgatatgttt tcaatgttca gtccaataca aagtaccgtt
     1621 gaagcagcaa aaacgttcgc aacatcagtg atgaagaaat ttagaaagtc agatttggca
     1681 aaaagtgtta atagtttgac tgacgccata actgatgctg ctggctcaat ttctaggtca
     1741 tcaacactgc gatcggtcaa cagcgcggct tcagtgtgga cggatataag tgacatacta
     1801 gattcaacag ataacgttgt ggcagctaca gcaacagccg ctgcgaagaa attcagagtt
     1861 aaagagttca caacggagtt taatggtgtt agctttgatg atatatccgc tgcggttgta
     1921 aaaacaaaaa tgagcaaatt gaatgttgtg gatgaggaaa tactaccaca aataataact
     1981 gaggcgtcgg agaagttcat accgaaccgt gcatatagat taatagatgg agagaaagta
     2041 tacgaggtta caacggaagg gaagtatttt gcttatctga cggaaacatt cgaagaagtt
     2101 gtgtttgatg cagagaggtt tgctgaattg gttactgact cgccagtaat atcagcaatt
     2161 atagacttta aaacgataaa gaatctgaat gataattatg gtattacgag ggagcaagcg
     2221 ttgaacatgt tacgttcaga tccgaaagta ttaagaagct ttattaatca aaacaatcct
     2281 ataattaaaa acagaataga gcaactaata ctgcagtgta ggatatagag cagtttgtat
     2341 gaggatgtga cc
//