From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Porcine respiratory coronavirus RNA, complete cds.
Date: 3 Jan 93 22:08:15 GMT
Distribution: bionet
Checksum: 03523 9

LOCUS       POIPRCVSH    4350 bp ss-RNA             VRL       21-DEC-1992
DEFINITION  Porcine respiratory coronavirus RNA, complete cds.
ACCESSION   M94103
KEYWORDS    .
SOURCE      Porcine respiratory coronavirus (strain TOY56-165) RNA.
  ORGANISM  Porcine respiratory coronavirus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Coronaviridae.
REFERENCE   1  (bases 1 to 4350)
  AUTHORS   Sanchez,C.M., Gebauer,F., Sune,C., Mendez,A., Dopazo,J. and
            Enjuanes,L.
  TITLE     Genetic evolution and tropism of transmissible gastroenteritis
            coronaviruses
  JOURNAL   Virology 190, 92-105 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..4350
                     /gene="S"
                     /codon_start=1
                     /translation="MKKLFVVLVVMPLIYGDNFPCSKLTNRTIGNHWNLIETFLLNYS
                     SRLPPNSDVVLGDYFPTVQPWFNCIRNNSNDLYVTLENLKALYWDYAKETITWNHXQR
                     LNVVVNGYPYSITVTTTRNFNSAEGAIICICKGSPPTTTTESSLTCNWGSECRLNHKF
                     PICPSNSEANCGNMLYGLQWFADAVVAYLHGASYRISFENQWSGTVTLGDMRATTLEI
                     AGTLVDLWWFNPVYDVSYYRVNNKNGITVVSNCTDQCASYVANVFTTKPGGFIPSDFS
                     FNNWFLLTNSSTLVSGKLVTKQPLLVNCLWPVPSFEEAASTFCFEGAGFDQCNGAVLN
                     NTVDVIRFNLNFTTNVQSGKGATVFSLNTTGGVTLEIACYNDIVSDSSFFSYGEIPFG
                     VTDGPRYCFVLYNGTALKYLGTLPPSVKEIAISKWGHFYINGYNFFSTFPIDCISFNL
                     TTGDSDVFWTIAYTSYTEALVQVENTAITKVTYCNSYVNNIKCSQITANLNNGFYPVS
                     SSEVGLVNKSVVLLPSFYTHTIVNITIDLGMKRSGYGQPIASTLSNITLPMQDQNTDV
                     YCIRSDQFSVYVHSTCKSALWDNIFKRNCTDVLDATAVIKTGTCPFSFDKLNNYLTFN
                     KFCLSLSPVGANCKFDVAARTRTNDQVVRSLYVIYEEGDNIVGVPSDNSGVHDLSVLH
                     LDSCTDYNIYGRTGVGIIRQTNRTLLSGLYYTSLSGDLLGFKNVSDGVIYSVTPCDVS
                     AQAAVIDGTIVGAITSINSELLGLTHWTTTPNFYYYSIYNYTNDRIRGTAIDSNDVDC
                     EPVITYSNIGVCKNGAWVFINVTHSDGDVQPISTGNVTIPTNFTISVQVEYXQVYTTP
                     VSIDCSRYVCNGNSRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSENALKL
                     ASVEAFXSSETLDPIYKEWPNIGGSWLEGLKYILPSDNSKRKYRSAIEDLLFDKVVTS
                     GLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGAL
                     GGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILASAFNQAIGNITQSFGKVNDAIHQ
                     TSRGLATVAKALVKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELMADA
                     QVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHL
                     FSLANAAPNGMIFFHTVLLPTAYETVTAWAGICALDGDRTFGLVVKDVQLTLFRNLDD
                     KFYLTPRTMYQPRVATSSDFVQIEGCDVLFVNATVSDLPSIIPDYIDINQTVQDILEN
                     FRPNWTVPELTFDIFNATYLNLTGEIDDLEFRSEKLHNTTVELAILIDNINNTLVNLE
                     WLNRIETYVKWPWYVWLLIGLVVIFCIPLLLFCCCSTGCCGCIGCLGSCCHSICSRRQ
                     FENYEPIEKVHVH"
BASE COUNT     1280 a    747 c    877 g   1441 t      5 others
ORIGIN      
        1 atgaaaaaac tatttgtggt tttggtcgta atgccattga tttatggaga caattttcct
       61 tgttctaaat tgactaatag aactataggc aaccattgga atctcattga aaccttcctt
      121 ctaaactata gtagtaggtt accacctaat tcagatgtgg tgttaggtga ttattttcct
      181 actgtacaac cttggtttaa ttgcattcgc aataatagta atgaccttta tgttacattg
      241 gaaaatctta aagcattgta ttgggattat gctaaagaaa ctatcacttg gaatcacara
      301 caacggttaa acgtagtcgt taatggatac ccatactcca tcacagttac aacaacccgc
      361 aattttaatt ctgctgaagg tgctattata tgcatttgta agggctcacc acctactacc
      421 accacagaat ctagtttgac ttgcaattgg ggtagtgagt gcaggttaaa ccataagttc
      481 cctatatgtc cttctaattc agaggcaaat tgtggtaata tgctgtatgg cctacaatgg
      541 tttgcagatg cggttgttgc ttatttacat ggtgctagtt accgtattag ttttgaaaat
      601 caatggtctg gcactgtcac acttggtgat atgcgtgcga ctacattaga aatcgctggc
      661 acgcttgtag acctttggtg gtttaatcct gtttatgatg tcagttatta tagagttaat
      721 aataaaaatg gtattaccgt agtttccaat tgcactgatc aatgtgctag ttatgtggct
      781 aatgttttta ctacaaagcc aggaggtttt ataccatcag attttagttt taataattgg
      841 ttccttctaa ctaatagctc cacgttggtt agtggtaaat tagttaccaa acagccgtta
      901 ttagttaatt gcttatggcc agtccctagc tttgaagaag cagcttctac attttgtttt
      961 gaaggtgctg gctttgatca atgtaatggt gctgttttaa ataacactgt agacgtcatt
     1021 aggtttaacc ttaattttac tacaaatgta caatcaggta agggtgccac agtgttttca
     1081 ttgaacacaa cgggtggtgt cactcttgaa atcgcatgtt ataatgatat agtgagtgac
     1141 tcgagctttt tcagttacgg tgaaattccg ttcggcgtaa ctgatggacc acggtactgt
     1201 ttcgtactct ataatggcac agctcttaag tatctaggaa cattaccacc tagtgtcaag
     1261 gagattgcta ttagtaagtg gggccatttt tatattaatg gttacaattt ctttagcaca
     1321 tttcctattg attgtatatc ttttaatttg accactggtg atagtgacgt tttctggaca
     1381 atagcttaca catcgtacac tgaagcatta gtacaagttg aaaacacagc tattacaaag
     1441 gtgacgtatt gtaatagtta cgttaataac attaaatgct ctcaaattac tgctaatttg
     1501 aataatggat tttatcctgt ttcttcaagt gaagttggtc ttgtcaataa gagtgttgtg
     1561 ttactaccta gcttttacac acataccatt gttaacataa ctattgatct tggtatgaag
     1621 cgtagtggtt atggtcaacc catagcctca acattaagta acattacact accaatgcag
     1681 gaccagaaca ccgatgtgta ctgtattcgt tctgaccaat tttcagttta tgttcattct
     1741 acttgcaaaa gtgctttatg ggacaatatt tttaagcgaa actgcacgga cgttttagat
     1801 gccacagctg ttataaaaac tggtacttgt cctttctcat ttgataaatt gaacaattac
     1861 ttaactttta acaagttctg tttgtcgttg agtcctgttg gtgctaattg taagtttgat
     1921 gtagctgccc gtacaagaac caatgatcag gttgttagaa gtttgtatgt aatatatgaa
     1981 gaaggagaca acatagtggg tgtaccgtct gataatagtg gtgtgcacga tttgtcagtg
     2041 ctacacctag attcctgcac agattacaat atatatggta gaactggtgt tggtattatt
     2101 agacaaacta acaggacgct acttagtggc ttatattaca catcactatc aggtgatttg
     2161 ttaggtttta aaaatgttag tgatggtgtc atctactctg taacgccatg tgatgtaagc
     2221 gcacaagcag ctgttattga tggcaccata gttggggcta tcacttccat taacagtgag
     2281 ctgttaggtc taacacattg gacaacaaca cctaattttt attactactc tatatataat
     2341 tacacaaatg ataggattcg tggcactgca attgacagta atgacgttga ttgtgaacct
     2401 gtcataacat attctaacat aggtgtttgt aaaaatggtg cttgggtttt tattaacgtc
     2461 acacattctg atggagacgt gcaaccaatt agcactggta atgtcacgat acctacaaac
     2521 tttaccatat ccgtgcaagt cgaatacntt caggtttaca ctacaccmgt gtcaatagac
     2581 tgttcaagat atgtttgtaa tggtaattct aggtgtaaca aattgttaac acaatacgtt
     2641 tctgcatgtc aaactattga gcaagcactt gcaatgggtg ccagacttga aaacatggag
     2701 gttgattcca tgttgtttgt ttctgaaaat gcccttaaat tggcktctgt cgaagcattc
     2761 natagttcag aaactttaga tcctatttac aaagaatggc ctaatatagg tggttcttgg
     2821 ctagaaggtc taaaatatat acttccgtcc gataatagca aacgtaagta tcgttcagct
     2881 atagaggact tgctttttga taaggttgta acatctggtt taggtacagt tgatgaagat
     2941 tataaacgtt gtacaggtgg ttatgacata gctgacttag tatgtgctca atactataat
     3001 ggcatcatgg tgctacctgg tgtggctaat gctgacaaaa tgactatgta tacagcatcc
     3061 cttgcaggtg gtataacatt aggtgcactt ggtggaggcg ccgtggctat accttttgca
     3121 gtagcagttc aggctagact taattatgtt gctctacaaa ctgatgtatt gaataaaaac
     3181 cagcagatcc tggctagtgc tttcaatcaa gctattggta acattacaca gtcatttggt
     3241 aaggttaatg atgctataca tcaaacatca cgaggtcttg ctactgttgc taaagcattg
     3301 gtaaaagtgc aagatgttgt caacacacaa gggcaagcat taagccacct aacagtacaa
     3361 ttgcaaaata atttccaagc cattagtagt tctattagtg acatttataa taggcttgat
     3421 gaattgatgg ctgatgcaca agttgacagg ctgatcacag gaagacttac agcacttaat
     3481 gcatttgtgt ctcagactct aaccagacaa gcggaggtta gggctagtag acaacttgcc
     3541 aaagacaagg ttaatgaatg cgttaggtct cagtctcaga gattcggatt ctgtggtaat
     3601 ggtacacatt tgttttcact cgcaaatgca gcaccaaatg gcatgatctt ctttcacaca
     3661 gtgctattac caacggctta tgaaactgtg actgcttggg caggtatttg tgctttagat
     3721 ggtgatcgca cttttggact tgtcgttaaa gatgtccagt tgactttgtt tcgtaatcta
     3781 gatgacaagt tctatttgac ccccagaact atgtatcagc ctagagtggc aactagttct
     3841 gactttgttc aaattgaagg gtgcgatgtg ctgtttgtta atgcaactgt aagtgatttg
     3901 cctagtatta tacctgatta tattgatatt aatcagactg ttcaagacat attagaaaat
     3961 tttagaccaa attggactgt acctgagttg acatttgaca tttttaacgc aacctattta
     4021 aacctgactg gtgaaattga tgacttagaa tttaggtcag aaaagctaca taacactact
     4081 gtagaacttg ccattcttat tgacaacatt aacaatacat tagtcaatct tgaatggctc
     4141 aatagaattg aaacctatgt aaaatggcct tggtatgtgt ggctactaat aggcttagta
     4201 gtaatatttt gcataccatt actgctattt tgctgttgta gtacaggttg ctgtggatgc
     4261 ataggttgtt taggaagttg ttgtcactct atatgcagta gaagacaatt tgaaaattac
     4321 gaacctattg aaaaagtgca cgtccattaa
//