From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rotavirus sp. outer capsid protein (VP7) mRNA, complete cds.
Date: 29 Dec 92 19:51:22 GMT
Distribution: bionet
Checksum: 16786 4

LOCUS       RO1VP7B      1062 bp ss-mRNA            VRL       09-DEC-1992
DEFINITION  Rotavirus sp. outer capsid protein (VP7) mRNA, complete cds.
ACCESSION   L07658
KEYWORDS    outer capsid protein VP7.
SOURCE      Rotavirus sp. (strain I321) cDNA to mRNA.
  ORGANISM  Rotavirus sp.
            Viridae; ds-RNA nonenveloped viruses; Reoviridae; Rotavirus.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Das,M., Dunn,S.J., Woode,G.N., Greenberg,H.B. and Rao,C.
  TITLE     Both surface proteins (VP4 and VP7) of an asymptomatic neonatal
            rotavirus strain (I321) have high levels of sequence identity with
            the homologous proteins of a serotype 10 bovine rotavirus
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    1..18
                     /citation=[1]
                     /note="PCR-related features: Primer and STS
                     GGCTTTAAAAGAGAGAAT; putative"
     misc_feature    complement(1050..1062)
                     /citation=[1]
                     /note="PCR-related features: primer and STS GGTCACATCATCA;
                     putative"
     CDS             49..1029
                     /gene="VP7"
                     /citation=[1]
                     /note="putative"
                     /product="outer capsid protein"
                     /codon_start=1
                     /translation="MYGIEYTTFLIYLILIILFNYILKSITRMMDYIIYKFLLIVTIA
                     SIIVNPQNYGINLPITGSMDMSYVNATKDEPFLTSTLCLYYPTEARTEIHDNEWTSTL
                     SQLFLTKGWPTGSVYFKEYDDIATFSVDPQLYCDYNIALMKYNSTLKLDMSELANLIL
                     NEWLSNPVDITLYYYQQTDEANKWIAMGQSCTIKLCPLNTQTLGIGCQTTNTGTFEEV
                     ATREKLVITDVVDGINHKLDVTTATYTIRNCKKLAPRENVAVIQVGGADVLDITSDPT
                     TNPQTERMMRINWKKWWQVFYTIVDDVNQIVQAMSKRSRSLNSAAFYYRV"
BASE COUNT      378 a    160 c    199 g    325 t
ORIGIN      
        1 ggcaaatttt gagagaattt ccgtttggct agcggttagt cccttttgat gtatggtatt
       61 gaatatacca cattcctaat ctacttaata ttgattatct tatttaatta catattaaag
      121 agtataacta gaatgatgga ctacataatt tataaatttt tgcttatagt cacgattgct
      181 tcaattattg ttaacccaca aaattatggt attaatttgc caataactgg gtcgatggat
      241 atgtcatatg tgaacgctac taaagatgaa ccatttctaa catcaacgtt atgtttatac
      301 tatccaacag aagctagaac agagatacac gataatgagt ggacaagtac gttatcgcaa
      361 ttgttcctaa caaagggatg gccaactgga tctgtatact ttaaagaata tgatgatata
      421 gctacttttt cagtggatcc gcaattatat tgtgactata acatagcttt gatgaaatac
      481 aattcgactc taaaacttga tatgtcggaa ttggcgaatt taatattaaa tgaatggctg
      541 tcgaatccgg tggacattac attatattat tatcaacaaa cagacgaagc aaataaatgg
      601 atagcaatgg gacaatcatg tacaataaaa ctatgtccat taaataccca aacgttaggg
      661 ataggatgtc agactacaaa tactggaaca tttgaagaag ttgcgacacg tgaaaaatta
      721 gtaattactg atgtggtcga tggcataaat cacaaactgg atgttactac tgcgacttat
      781 actatcagaa attgcaaaaa attagcccca agagaaaatg tagcagtaat tcaagtaggt
      841 ggtgctgatg tccttgatat aacatctgat ccgacaacta atccacaaac tgaacgaatg
      901 atgagaataa attggaaaaa atggtggcaa gtgttctata ctatagttga tgatgtgaat
      961 caaattgtgc aagcaatgtc caaaaggtcc agatcactga attcggcagc attttattac
     1021 agagtgtaga tattatgtag attagagttt gatgatgtga cc
//