From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Pan troglodytes (clone Ptr-13mer(219)) alpha-satellite repeat.
Date: 13 Jan 93 05:46:17 GMT
Distribution: bionet
Checksum: 13380 4

LOCUS       CHPSATEA     1180 bp ds-DNA             PRI       12-JAN-1993
DEFINITION  Pan troglodytes (clone Ptr-13mer(219)) alpha-satellite repeat.
ACCESSION   L08574
KEYWORDS    satellite repeat.
SOURCE      Pan troglodytes DNA.
  ORGANISM  Pan troglodytes
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Pongidae.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Warburton,P.E. and Willard,H.F.
  TITLE     PCR amplification of tandemly repeated DNA: Analysis of intra- and
            interchromosomal sequence variation and homologous unequal
            crossing-over in human alpha satellite DNA
  JOURNAL   Nucleic Acids Res. (1992) In press
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Warburton,P.E., Waye,J.S. and Willard,H.F.
  TITLE     Unequal crossing-over in tandemly repeated DNA: Implications for
            higher-order structural characteristics within centromeric
            heterochromatin
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_region   1..1180
                     /rpt_family="satellite repeat"
                     /citation=[1]
                     /note="'alpha satellite 13 monomer higher-order repeat,
                     sequencedbetweem primers 17-1A and 17-2A; monomeric
                     configuration different from human13mer'"
     misc_recomb     867..870
                     /note="'possible recombination, deletion of one monomer
                     relative rto the humanchromosome 17 16mer'"
BASE COUNT      338 a    225 c    253 g    364 t
ORIGIN      
        1 tctagacgga agccttctca gaaacttctc tgtgatgatt gcattcaact cacagagctg
       61 aacactccta tggagacagc agttttgaaa ctctctttct gtggaatctg caagtggata
      121 tgtggacctc tttgaagatt tctttggaaa cgggaatatc ttcacataaa aactaaacag
      181 aagcattctc tgaaacttct ctgtgatgtt ggtgttcaac tcacagagtt tcacactgct
      241 tttcatagag tagttctgaa acattctttt cgtagtgtct gcaagtggac atttggagag
      301 ctttcaggca tgtggtggaa aacgaattat cgtcacataa aaaccagaga gaagcattgt
      361 cagaaacttc tttgtgatga ttgcattcac ctcacagagt tgaaggttcc ttttcaaaca
      421 gcagtttcca aacactcttt ctgtggaatc tgcaagtgga tatttggacc gctttgaaga
      481 tttcgttgga aacgggatac tcttcacaga aaagctaaac agaagcattc tcagaaactt
      541 ctttgtgatg tttgcattca actcacagag ttgaactttc cttacgagag ggaagctttg
      601 aaacactctt tttctagaat ctgcaagtgg acatttggag ggctttgagg cctgtggtgg
      661 aaaaggaaat atcttcccgt agaaactaga tagaagcatt ctcagcaact actttgggat
      721 gattgcattc aagtcacaga gtggaacatt ccctttgaca gagcagtttg gaaactctct
      781 ttttgtagaa tctgcaagtg gagatatgga ccgcttggag gcccatggta gtaaaggaaa
      841 taacttcatg taaaacctag acagtagcat tctcagaacc ttcttcgaga tgtttgcatt
      901 caactcacag tgttgaacca ttctttgata gttcaggttt gaaacactct ttttgtagaa
      961 actgcaagtg gataatttga cccctctgag gatttcgttg gaaacgggaa aaaccgcgcc
     1021 tcactaaact gaagcattct cagaactttc ttcgtgatgt ttgtattcaa ctcacagtgt
     1081 tgaacctttc tttgatagtt caggtttgaa acactctttt tgtagaaact gcaagtggat
     1141 atttggtcct ctctgaggat ttcgttggaa acgggataaa
//