From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: O.sinensis chloroplast ATPase subunits
Date: 28 Dec 92 21:44:22 GMT
Distribution: bionet
Checksum: 32505 16

LOCUS       ODNCPOSATQ   5399 bp ds-DNA             ORG       02-DEC-1992
DEFINITION  O.sinensis chloroplast ATPase subunits
ACCESSION   X60752
KEYWORDS    ATP synthase; ATPase; atpA gene; atpD gene; atpF gene; atpG gene;
            atpH gene; atpI gene.
SOURCE      Chloroplast Odontella sinensis DNA.
  ORGANISM  Chloroplast Odontella sinensis
            Eukaryota; Chromophycota; Bacillariophyceae; Pennales;
            Araphidineae; Diatomaceae.
REFERENCE   1  (bases 1 to 5399)
  AUTHORS   Pancic,P.G., Kowallik,K.V. and Stromann,H.
  TITLE     Chloroplast ATPase genes in the diatom Odontella sinensis reflect
            cyanobacterial characters in structure and arrangement
  JOURNAL   J. Mol. Biol. 224, 529-536 (1992)
  STANDARD  full automatic
COMMENT     *source: stage=vegetative cell; *source: cell_type=unicellular;
            *source: clone_library=OsCp-Fragment-Bank; *source: clone=pOsp5
            pOsX8; *source: map_position=LSC-region;
               From EMBL    entry CHOSATPA;  dated 08-JUL-1992.
FEATURES             Location/Qualifiers
     repeat_unit     5321..5349
                     /rpt_type=inverted
     repeat_unit     5321..5349
                     /rpt_type=inverted
     repeat_unit     5360
                     /rpt_type=inverted
     repeat_unit     5360..5388
                     /rpt_type=inverted
     CDS             53..808
                     /note="ORF 756"
                     /codon_start=1
                     /translation="MNTNYPILEIKNLKACINENEILKDLNLKIHKGEIHAIMGPNGS
                     GKSTFSKVLAGHPAYNILSGDILFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNE
                     DFLRLAYNSKQKFLNKDEVDPISFFTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRN
                     EILQMILLDSELSILDETDSGLDIDALKIISKGINTFMNQNKAIILITHYQRLLDYVQ
                     PNYVHVMQNGKIIKTGTADLAKELESKGYEWLK"
     CDS             53..808
                     /note="ORF 252"
                     /codon_start=1
                     /translation="MNTNYPILEIKNLKACINENEILKDLNLKIHKGEIHAIMGPNGS
                     GKSTFSKVLAGHPAYNILSGDILFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNE
                     DFLRLAYNSKQKFLNKDEVDPISFFTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRN
                     EILQMILLDSELSILDETDSGLDIDALKIISKGINTFMNQNKAIILITHYQRLLDYVQ
                     PNYVHVMQNGKIIKTGTADLAKELESKGYEWLK"
     CDS             936..1664
                     /EC_number="3.6.1.3"
                     /gene="atpI"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MYPDNFYSSTFTLLAEAEVGKHFYWDIAGFLVHGQVLVVVWFVL
                     ALLLLFAVLGTRDIDWIPNSWQNFAESAVDFVTDIARDQLGESFYREWVPFIGTLFLF
                     IFGCNWAGAIIPWKLIELPEGELAAPTNDINTTVALALLTSLAYFYAGLSKKGFGYFK
                     RYIQPIPLLLPINILEDFTKPLSLSFRLFGNVLADELTITVLTSLVPLVIPLPIMALG
                     IFAGSVQALIFSTLAAAYIAEALE"
     CDS             936..1664
                     /EC_number="3.6.1.3"
                     /gene="atpI"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MYPDNFYSSTFTLLAEAEVGKHFYWDIAGFLVHGQVLVVVWFVL
                     ALLLLFAVLGTRDIDWIPNSWQNFAESAVDFVTDIARDQLGESFYREWVPFIGTLFLF
                     IFGCNWAGAIIPWKLIELPEGELAAPTNDINTTVALALLTSLAYFYAGLSKKGFGYFK
                     RYIQPIPLLLPINILEDFTKPLSLSFRLFGNVLADELTITVLTSLVPLVIPLPIMALG
                     IFAGSVQALIFSTLAAAYIAEALE"
     CDS             1734..1982
                     /EC_number="3.6.1.3"
                     /gene="atpH"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MDSIISAASVIAAGLAIGLAAIGPGIGQGNAAGQAVEGIARQPE
                     GENKIRGTLLLSLAFMEALTIYGLVVALALLFANPFNG"
     CDS             1734..1982
                     /EC_number="3.6.1.3"
                     /gene="atpH"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MDSIISAASVIAAGLAIGLAAIGPGIGQGNAAGQAVEGIARQPE
                     GENKIRGTLLLSLAFMEALTIYGLVVALALLFANPFNG"
     CDS             2094..2564
                     /EC_number="3.6.1.3"
                     /gene="atpG"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MVNLSIIISSSEVNGPGGLFDINATLPLVAIQFLLLMVLLNVIL
                     YSPLLTIIEERKEYILNKLAKASEILSQANELTAQYEQELNTVRKEAQLEITNSQKIH
                     KEILEIELNISQKYIDNLLENITDDLLEKKNTALNSLDTIVQSLCVQIENRLSI"
     CDS             2094..2564
                     /EC_number="3.6.1.3"
                     /gene="atpG"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MVNLSIIISSSEVNGPGGLFDINATLPLVAIQFLLLMVLLNVIL
                     YSPLLTIIEERKEYILNKLAKASEILSQANELTAQYEQELNTVRKEAQLEITNSQKIH
                     KEILEIELNISQKYIDNLLENITDDLLEKKNTALNSLDTIVQSLCVQIENRLSI"
     CDS             2628..3167
                     /EC_number="3.6.1.3"
                     /gene="atpF"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MENFNQIFTLLAENEGIGLNTDILETGIINIAALVGILIYAGRD
                     FLGSFLEQRKTSIVQGVQDAEGRLEEANRRLSEAQKQLSQAHIVISEIKNETISAKKV
                     LLESDAYQAKKDLTTRFSRALATFRSKERQIFLEVKEQIILLVLKRTVARAQQTFGPK
                     ERATALITETINKLEGDLL"
     CDS             2628..3167
                     /EC_number="3.6.1.3"
                     /gene="atpF"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MENFNQIFTLLAENEGIGLNTDILETGIINIAALVGILIYAGRD
                     FLGSFLEQRKTSIVQGVQDAEGRLEEANRRLSEAQKQLSQAHIVISEIKNETISAKKV
                     LLESDAYQAKKDLTTRFSRALATFRSKERQIFLEVKEQIILLVLKRTVARAQQTFGPK
                     ERATALITETINKLEGDLL"
     CDS             3164..3727
                     /EC_number="3.6.1.3"
                     /gene="atpD"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MSINPLASKIAAPYARALFDFSVDQNLMHQITADFQNLEVFLNK
                     TPDLTEYLSNPLISAKSKEEVLNKTLKSQINKETFKFLIVLVNRSRINLLEPIIASYL
                     NLVYNAASVKMIEVSTAYAFTNLQKNTLIKKLKELTNAREIRLVITVDSSLIGGFLIK
                     TNSKVLDFTIKNQLQKLAKHLDSVLEI"
     CDS             3164..3727
                     /EC_number="3.6.1.3"
                     /gene="atpD"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MSINPLASKIAAPYARALFDFSVDQNLMHQITADFQNLEVFLNK
                     TPDLTEYLSNPLISAKSKEEVLNKTLKSQINKETFKFLIVLVNRSRINLLEPIIASYL
                     NLVYNAASVKMIEVSTAYAFTNLQKNTLIKKLKELTNAREIRLVITVDSSLIGGFLIK
                     TNSKVLDFTIKNQLQKLAKHLDSVLEI"
     CDS             3775..5286
                     /EC_number="3.6.1.3"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MINIRPDEISSIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYG
                     LDQVMSGELLEFEDKTIGIALNLENDNVGVVLMGNGRQILEGSTVKTTGQIAQIPTGE
                     AFLGRVVNPLGAPIDGKGDIANTETRLLEAMAPGIISRKSVCEPLQTGITSIDAMIPI
                     GRGQRELIIGDRQTGKTAIAVDTIINQKTEDVVCVYVGVGQKASTVAQVVNVLEEKEA
                     MAYTIIVCASANDPATLQYIAPYAGAALAEYFMYNGKATLVIYDDLTKQAMAYRQMSL
                     LLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPVIETQASDVSAYIPTN
                     VISITDGQIFLSNDLFNSGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAE
                     LEAFSQFASDLDEATQKQLARGTRLREVLKQPQNSPLSVAEQVALIYTGINGFLDELE
                     VASVKKYCASLLSFLNTSNNSYIGIVSSTNQFTAEAETALKEAISESKAVFMK"
     CDS             3775..5286
                     /EC_number="3.6.1.3"
                     /product="adenosinetriphosphatase"
                     /codon_start=1
                     /translation="MINIRPDEISSIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYG
                     LDQVMSGELLEFEDKTIGIALNLENDNVGVVLMGNGRQILEGSTVKTTGQIAQIPTGE
                     AFLGRVVNPLGAPIDGKGDIANTETRLLEAMAPGIISRKSVCEPLQTGITSIDAMIPI
                     GRGQRELIIGDRQTGKTAIAVDTIINQKTEDVVCVYVGVGQKASTVAQVVNVLEEKEA
                     MAYTIIVCASANDPATLQYIAPYAGAALAEYFMYNGKATLVIYDDLTKQAMAYRQMSL
                     LLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPVIETQASDVSAYIPTN
                     VISITDGQIFLSNDLFNSGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAE
                     LEAFSQFASDLDEATQKQLARGTRLREVLKQPQNSPLSVAEQVALIYTGINGFLDELE
                     VASVKKYCASLLSFLNTSNNSYIGIVSSTNQFTAEAETALKEAISESKAVFMK"
BASE COUNT     1891 a    740 c    911 g   1857 t
ORIGIN      
        1 ctgcagaagc agatcgttta ttaactttaa aattagaagg aagtgtcggt taatgaatac
       61 aaactatcct atattagaaa ttaaaaattt aaaagcttgt attaatgaaa atgaaatttt
      121 aaaagattta aatttaaaaa ttcataaagg tgagattcac gcaataatgg gacctaatgg
      181 ttctggaaag agcacatttt caaaagttct tgcaggtcat cctgcttaca atattttaag
      241 tggtgatatt ttatttaaag gatctagtat tcttaattta gatccggaag agcgttcaca
      301 tatgggaatc tttttagcat ttcagtatcc aattgaaatt cctggtgtta gtaacgaaga
      361 ttttttgcgt cttgcttata attcaaaaca aaaattttta aataaagatg aagttgatcc
      421 gatttcattt tttactataa tcaatgagaa attaaaactt gttgatatgt caccagtttt
      481 tttaagccga aatgttaatg aagggttttc tgggggtgaa aaaaagagaa atgaaatttt
      541 acaaatgatc ttattagact cagaattatc aattttagat gaaacagact ctggtttaga
      601 cattgatgct ttaaagatca tatcaaaagg tattaataca tttatgaatc aaaataaagc
      661 aattatttta ataacacatt accagagatt actagattat gttcagccta attatgtcca
      721 tgtaatgcaa aatggtaaaa taataaaaac aggtactgct gatttagcta aagaattaga
      781 gagtaaaggt tatgaatggt taaaataagt aataaagatt aaaaaagaga gcttttagat
      841 aaaaataaac ctaaaattag taaaaagtta ttatactata tattgttcct gtatattttt
      901 taatattggg taatttacta aattagttaa attttatgta cccagataat ttttattcaa
      961 gtacgtttac actattagcg gaggcagaag tcggaaaaca cttttactgg gatattgcag
     1021 gctttttagt acatgggcaa gtcttagtgg tagtctggtt tgtgttagct cttttactac
     1081 tatttgcagt tttaggtacg cgcgacatag accggatccc aaatagttgg caaaattttg
     1141 ccgaatcagc tgttgacttt gttactgata ttgctagaga ccaattaggt gaaagtttct
     1201 atagagaatg ggttccattt attggtacat tattcttatt tatttttgga tgtaattggg
     1261 ctggtgcaat tattccgtgg aaattaattg agttaccgga aggcgaactt gccgctccaa
     1321 ctaatgatat taatacaacg gtggcattag cgttattaac atctcttgcc tatttctatg
     1381 ctggtttaag taaaaaaggg ttcggatatt tcaaacgata tattcaacca attccacttc
     1441 ttctacctat taatatttta gaagatttta cgaaaccatt atcgctaagc ttccgattat
     1501 ttggaaatgt tttagcagat gaattaacta ttactgtatt aacatcgtta gttccattag
     1561 taattccatt accaattatg gcattaggga tttttgcagg ttcagtacaa gctttaattt
     1621 tctcaacatt agctgctgct tatatcgccg aagctcttga gtaaattaaa attaaattcg
     1681 attttttaaa attatatttt tattcacatt tattaattca aataaaattt attatggatt
     1741 ctatcatctc tgctgcttct gttatagctg ctggtttagc gattggttta gctgctatcg
     1801 gccctggtat tggtcaaggt aatgctgctg gtcaagctgt agaaggtatt gctcgtcaac
     1861 ctgaaggaga aaacaaaatt cgtggtacgt tattattaag tttagctttc atggaagctt
     1921 taacaattta tggtctagta gtagcattag cattattatt cgctaacccg tttaatggtt
     1981 aatccgacta ttgttagtaa taacaatatg tagatagatc tagcgtaaaa ttatttacgc
     2041 taattctatc tattaaaaat ctttaattct atagtataac atatagattt tctatggtta
     2101 atctttcaat aataatttca agttctgaag tcaatggtcc cggcggatta ttcgacatta
     2161 atgcaacttt accgttagta gcgattcaat ttcttttatt aatggttctg cttaatgtta
     2221 ttttatatag cccattactg actattatag aagaacgtaa agaatatatt ttaaacaaac
     2281 ttgcaaaagc ctctgaaata ttatctcagg caaatgaatt gactgctcag tacgaacaag
     2341 aattaaatac ggtccgtaaa gaagcacaat tagaaattac aaactcacaa aaaattcata
     2401 aagaaatttt agagattgaa cttaatattt ctcaaaaata tattgataat ttattagaaa
     2461 atataacaga tgatctgctt gagaaaaaaa atacagctct taatagttta gatactattg
     2521 ttcagtcgtt atgtgttcaa attgaaaata gattatcaat ttaaattttt tgttagatgt
     2581 aattttcctt atttataact gaacagttta tataaaaact ttaaaacatg gaaaatttta
     2641 atcaaatttt tacattactt gccgaaaatg aaggtattgg tttaaacact gatattcttg
     2701 aaacaggtat aattaacatt gccgctttag ttggtatttt aatttatgcc ggccgagatt
     2761 ttctaggctc ttttctagag caacgtaaaa ccagtattgt acaaggtgtt caagatgctg
     2821 agggtagatt agaagaggct aatcgacgct taagcgaagc tcagaagcaa ttaagtcaag
     2881 cgcatatagt aattagcgag ataaaaaatg aaacaatatc agctaaaaaa gttttattag
     2941 aatctgatgc ttatcaagca aagaaagatt taacaactcg ttttagccga gctttagcta
     3001 cgtttcgttc aaaagaacgc caaatatttt tagaagttaa agaacaaatt atcctattag
     3061 ttttaaaacg tacagtagct cgcgctcagc aaacttttgg tccaaaagaa agagcaacag
     3121 cattaattac tgaaacaatt aataaattag aaggagattt gttatgagta taaatccttt
     3181 agcttcaaaa attgcagctc cttatgcacg tgctttgttt gacttctcag ttgatcaaaa
     3241 tcttatgcat caaattactg ctgattttca gaatttagaa gtctttttaa ataaaacacc
     3301 tgatttaaca gaatatttaa gtaatcctct tattagtgca aaatcgaaag aggaagtttt
     3361 aaataaaact ttaaaatcgc aaataaacaa agaaactttt aaatttttaa ttgttttagt
     3421 aaatcgaagt agaattaatt tgttagaacc cattattgct agttatctaa atctagttta
     3481 taatgcagct tctgttaaaa tgattgaagt ttctactgct tatgcattta cgaatttgca
     3541 aaaaaatact ttaattaaaa aattaaaaga attaacaaac gcaagagaaa ttcgcttagt
     3601 aattactgtt gattcaagtc ttattggcgg ttttttaatt aaaactaatt caaaagtact
     3661 tgattttacc attaaaaatc aattacaaaa attagctaaa catttagata gtgttttaga
     3721 aatttaaaaa taactaaatt cttttattaa ctttattatt ttaaaaataa tacaatgata
     3781 aatattcgtc cagacgaaat tagtagtatt atccgtgaac aaattgaaca atatgatcaa
     3841 gatgttaaag tagataatat tggtactgta ttacaagtag gtgatggtat tgctcgagtt
     3901 tatgggcttg atcaagtaat gagtggtgaa cttttagaat ttgaagataa aacaattggt
     3961 attgcactaa acttagagaa cgacaatgtt ggtgttgtat taatgggtaa tggtcgtcaa
     4021 attttagaag gtagtactgt aaaaacaaca ggtcaaattg ctcaaattcc aacaggtgag
     4081 gcgttcttag gccgtgttgt taatccgtta ggtgcaccta ttgatggaaa aggtgatatt
     4141 gcgaatacag aaactcgctt actagaagca atggcgccag gtattattag tcgtaaatca
     4201 gtttgtgaac cattacaaac aggtattaca tcaattgacg ctatgattcc aattggacga
     4261 ggtcaacgag aattaatcat tggtgatcgt caaacaggga aaacagctat tgcggttgat
     4321 acgattatta accaaaaaac tgaagatgtt gtttgtgttt atgttggtgt tggacaaaaa
     4381 gcttcaacag ttgcacaagt agtaaacgta cttgaagaaa aagaggcaat ggcatacaca
     4441 attattgttt gtgcaagtgc taatgatcct gcaacattac aatatattgc gccatatgcg
     4501 ggtgctgcat tagctgagta ctttatgtat aatggtaaag caactttagt tatttatgat
     4561 gatttaacta aacaagcaat ggcataccga caaatgtcgt tattacttcg tcgtccacca
     4621 ggacgtgagg cttaccctgg tgatgttttc tatttacact ctcgtttatt agaacgtgct
     4681 gcaaaactta gtgatgcttt aggtggtgga agtatgactg cattacctgt tattgagact
     4741 caagcaagtg acgtatcagc atatattcca actaacgtaa tttcgattac ggatggccaa
     4801 attttcttat caaatgattt atttaactca gggattcgtc cagctattaa tgttggtatt
     4861 tctgtttcac gtgtaggttc tgctgcacaa acaaaagcta tgaaacaagt agcgggtaaa
     4921 ttaaaattag aattggcaca atttgctgaa ttagaagctt tctctcaatt tgcctctgat
     4981 ttagatgaag caacacaaaa acaactagct cgtggtacac gattacgtga agtgttaaaa
     5041 caacctcaga attctccttt atcagtagca gagcaagtag ctttaatcta tacaggtatt
     5101 aatgggttct tagatgaatt agaagttgca tctgttaaaa agtactgtgc aagtttatta
     5161 tcattcttaa atacatcaaa taactcgtat attggaattg taagttcaac aaatcaattt
     5221 actgcagaag cagagactgc tctaaaagaa gctatctctg agtcaaaagc agtatttatg
     5281 aaataatcaa cttgtaattt gttactagtt ttttctaatt atagaaaata ttttaaaaag
     5341 attaaatttg tagaaaaata aatttaatct ttttaaaata ttttctatgt aaaatttct
//