From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bradyrhizobium japonicum nodulation protein (nodD1, hodD2, and nodY
Date: 8 Jan 93 05:50:01 GMT
Distribution: bionet
Checksum: 45351 8

LOCUS       RHBNODYDA    3549 bp ds-DNA             BCT       07-JAN-1993
DEFINITION  Bradyrhizobium japonicum nodulation protein (nodD1, hodD2, and nodY
            genes, complete cds, and nodA gene, 5' end.
ACCESSION   M81825
KEYWORDS    nodA gene; nodD1 gene; nodD2 gene; nodY gene; nodulation protein.
SOURCE      Bradyrhizobium japonicum (library: USDA 3I1b1l0spc4) DNA.
  ORGANISM  Bradyrhizobium japonicum
            Prokaryotae; Gracilicutes; Scotobacteria; Rhizobiaceae.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Goettfert,M., Holzhaeuser,D., Baeni,D. and Hennecke,H.
  TITLE     Structural and functional analysis of two different nodD genes in
            Bradyrhizobium japonicum
  JOURNAL   Mol. Plant Microb. Interact. 5, 257-265 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    2681..2725
                     /note="nod box"
     CDS             complement(99..1094)
                     /gene="nodD2"
                     /partial
                     /product="nodulation protein"
                     /codon_start=1
                     /translation="EMRFKGLDLNLLVALDALITERNLSSAARKINLSQPAMSAAVAR
                     LRKHFRDELFGMRGRELVLSSRAEGLAAPVREALMHIELSIMARHPFDPARLNRRFRI
                     VLSDFVTVVLFRNVVARVTREAPAVSFELAAPTDEHELLLRRGEVDFVIRPDFFMSST
                     HPRAALFEERLVCVGCCTNRELQPRLTFDRYMSMGHVAVKHGGAPRTPVEHSFLTDLG
                     PTRRIDILVQSFSMIPPLIVGTNRIGTMPLGLVRHFQRTMPLRIVELPHPFPAFTEAV
                     QWPSLHNSDPGSLWMRDILFQEATRMATTQELRVTSSPEDAEPPGHFVRSVSPLP"
     CDS             complement(1725..2672)
                     /gene="nodD1"
                     /partial
                     /product="nodulation protein"
                     /codon_start=1
                     /translation="HMRFKGLDLNLLVALDAVMTARNLTAAARKINLSQPAMSAAIAR
                     LRTYFRDELFTMRGRELVPTPGAEALAGPVREALLHIQLSIISRDALDPAQSSRRFRV
                     ILSDFMTIVFFRRIVDRMAQEAPAVRFELLPFSDEPDDLLRRGEVDFLILPELFMSSA
                     HPKATLFDESLVCVGCRANKQLSRQLTFEQYISMGHVTAKFGRALRPNLEEWFLLEHG
                     LRRRIEVVVQGFSLIPPLLLDTSRIGTMPLRLARHFEKRMPLRIIQPPLPLPTFTEAL
                     QWPSFHNTDPASIWMRRILLEEASNMASGDQEPPTRRRC"
     CDS             2783..3421
                     /gene="nodY"
                     /product="nodulation protein"
                     /codon_start=1
                     /translation="MVSGRSRELREELPDVGAHHGRALLFLLKRGRSNAKRVPINVGM
                     QISSVSIFQVYPRTIEGAFSLILVSKNRGRRRLRMPRIPGAVPNGSPVQCMWGVSKMY
                     KSQCDLMPLRCAIDEACAPMAGPQTSKRRRAMRLQAQKLAGADRFWLAQPPRRQLPSY
                     RERGINRTRVQSSDRSVAQRPAARSRRAVPSSDRAWRRISAFIGGSANSELT"
     CDS             3418..>3549
                     /gene="nodA"
                     /product="nodulation protein"
                     /codon_start=1
                     /translation="MTIPALHSTGARKLAMNIAVSPTAEGSSGRAQVQWSLRWESELQ
                     "
BASE COUNT      777 a    964 c   1091 g    717 t
ORIGIN      
        1 ggatcctttc ccccggcaat aagagcaagc caggcgagca ggaattgtgt gttgagacaa
       61 gtgttggaat gtgaggttcg tagacttcgc gaatgtgctt acggcaacgg tgagacggat
      121 cgcacgaaat gtcccggggg ctccgcgtct tccgggctgc tggtcacacg gagctcttgt
      181 gtagttgcca tgcgggtggc ctcctgaaac aaaatgtccc tcatccacag acttcccggg
      241 tcgctgttgt gaagtgaggg ccattggacc gcctcggtga aggcggggaa tggatgcgga
      301 agctcaacga tccgaagggg catcgttctt tggaaatgcc tcacgagccc taatggcatc
      361 gtgcctatgc ggttcgtccc aactatgaga ggcgggatca tgctgaagct ctgcacgagg
      421 atgtcgatgc gccgcgtggg tccgagatca gtcaaaaagg aatgctcaac tggcgtccgg
      481 ggcgcacctc cgtgcttaac tgcaacgtga cccatcgaca tatatcgatc gaatgtaagc
      541 cggggttgta attccctatt ggtgcagcag cctacgcaga cgagtcgctc ctcgaatagg
      601 gccgctctgg ggtgcgtgct ggacatgaaa aaatctggcc ggataacaaa atcgacttca
      661 ccgcggcgga ggagcagctc gtgttcatcg gtcggcgcag ccaattcgaa gctgacggcg
      721 ggggcttctc gcgtgacgcg tgctacgaca tttcggaaga gcacaactgt tacgaagtca
      781 gaaaggacga tcctgaatcg gcggttcaat cgagctgggt cgaacggatg tcgggccata
      841 atcgagagtt caatgtgcat cagagcctcg cgcacaggag ccgcgagccc ttccgcgcgt
      901 gagctcaaga caagttcgcg ccccctcatt ccaaacagtt catcacggaa atgcttgcgc
      961 agccgggcaa cggctgcgct cattgccggc tgactaagat tgatcttgcg tgcggctgac
     1021 gagaggttgc gctcagttat tagagcatcc agcgcgacca gaagatttag atccagacct
     1081 ttgaaacgca tctcttccta tccggcacaa acgtcgttgc tgcgcaatag cgtgcggtgg
     1141 cgccagcgcc tggagcaatc gtcttggccc gccccaatgg acatcggctc attcctgcgc
     1201 ccgggaaagg aagcttgcga gatgaccgca acaatggaga gcaggcggaa agccgatcgg
     1261 cagcggcggg aaagcgtcgg gagctccaag ctaattggtc ttgccggttc cggccggcca
     1321 cgcagcaggg tcgttcagtc cgctgatggc agatcagccc agtgttcgtc agcgtgccaa
     1381 agcgcggtgt cgacagctgg gtcgtgcagc gcttgtcacg agagcaacct acaacctgac
     1441 gcaatgtgcg gttcaagaca ttttagtgat agagccaaac atttgcacgg caggcatatt
     1501 cttctgcgat ggttgccgga cgtagcctga atgcgtcgtg agcgcatcaa accgcacctt
     1561 cgaggtcacc acgcgcacaa ctggaaaagg cttcgcgacc gatcgtcgca ttgcgcgtct
     1621 gtggctcctt ctcacctcca taccctggaa agacgaaaga aaacggggca cgtcgaaggt
     1681 tctacagtgt gccggggatg ttcagagcgc agcttaaggt aagcctaaca gcgcctgcga
     1741 gttggaggct cctggtcccc agatgccatg ttggatgctt cctcgagcaa tatccgacgc
     1801 atccagatgc tcgcggggtc ggtattgtgg aatgagggcc actgcagggc ctctgtgaat
     1861 gtgggcaggg ggaggggcgg ttggatgatc cgcaacggca tccgcttttc gaagtgcctg
     1921 gccagtcgta agggcatcgt gccgatacgg ctcgtgtcta gcaacagggg cggaatcagg
     1981 ctaaagccct gcacgacgac ctcaattcgt ctcctcaggc cgtgctcaag caaaaaccat
     2041 tcttcgaggt tcggtctcag tgcgcgtccg aacttggcag taacgtgccc catcgagatg
     2101 tattgttcga acgtaagctg ccgggatagc tgcttgttcg cgcggcatcc gacgcatacg
     2161 aggctctcgt cgaacagcgt cgccttaggg tgcgcgctcg acatgaaaag ttccggcaga
     2221 atgagaaagt cgacctcgcc ccgccgcagc aggtcatccg gttcatcaga aaatggcagc
     2281 agttcgaagc gcaccgcggg ggcttcttgc gccatgcggt ccacaattct gcggaaaaaa
     2341 acgatcgtca tgaaatctga gagaatgacc ctgaagcgtc ggctcgattg agcagggtcg
     2401 agcgcgtccc gcgatatgat tgagagttgg atgtgcagca gggcctcgcg aaccggacct
     2461 gcaagcgctt ccgcgccagg tgtcgggacg agttcgcgac ctctcatagt aaagagttca
     2521 tcgcggaaat aggtgcgcag ccgtgcgatc gcagcgctca tagcaggctg gctcagattg
     2581 attttgcgag ccgccgctgt gaggttgcgc gccgtcatca cggcgtcgag cgcaacgaga
     2641 agatttagat caagtccctt gaaccgcatg tgatgagtct atccatcgtg tggatgtgtt
     2701 ctatcgaaac aatcgatttt accaaactgg gggaggttgg atagcaaact gaagtttgga
     2761 aaaagcaatt agacgcgcca cgatggtttc cggtcgttca cgtgagctaa gagaagagct
     2821 cccagacgtg ggagcgcacc atgggcgcgc gttgttgttt ctccttaagc gtggccgttc
     2881 gaacgccaag cgcgtcccga taaacgttgg tatgcagata tcatccgttt ccatatttca
     2941 ggtttacccg cgtacaattg agggcgcgtt cagcctcatt ctagtgtcga agaatagagg
     3001 cagacgcagg ttgcggatgc caagaattcc aggcgccgtt ccaaatggct cgcctgtcca
     3061 gtgcatgtgg ggcgtgtcga agatgtataa aagccagtgt gatctgatgc cgctccgatg
     3121 cgccatcgat gaggcttgcg cgccgatggc cggccctcag acgtcaaagc gccggagggc
     3181 gatgcgactg caggcacaaa agctcgctgg tgcagacagg ttctggctag cccaaccgcc
     3241 tcgtcggcag cttccgagtt atcgtgagcg cggcatcaac cgcacgaggg tgcaatcaag
     3301 cgatcgctcc gtcgcgcaaa ggccagcggc gcggagtagg cgagcagtgc cgagctccga
     3361 cagagcatgg cggcgcatct cagcattcat cggcggttcg gcgaatagcg aattgacgtg
     3421 accatccccg ctcttcattc caccggcgca aggaagctcg ccatgaacat tgccgtctcc
     3481 ccgactgcgg aaggatcttc tgggcgcgct caagtgcagt ggagccttcg ttgggaaagt
     3541 gaactgcag
//