From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Eubacterium sp. (clones OSVL-20, OSVL-21, OSVL-2) 16S ribosomal
Date: 6 Nov 92 18:27:56 GMT
Distribution: bionet
Checksum: 16854 4

LOCUS       EUBRRDA       877 bp ss-rRNA            RNA       02-NOV-1992
DEFINITION  Eubacterium sp. (clones OSVL-20, OSVL-21, OSVL-2) 16S ribosomal
            RNA, partial sequence.
ACCESSION   L04703
KEYWORDS    16S ribosomal RNA.
SOURCE      Eubacterium sp. (strain Octopus Spring:OS-20) (library: Octopus
            Spring V-Long) cDNA to rRNA.
  ORGANISM  Eubacterium sp.
            Prokaryotae; Eubacteria.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Ward,D.M., Bateson,M.M., Weller,R. and Ruff-Roberts,A.L.
  TITLE     Ribosomal RNA analysis of microorganisms as they occur in nature
  JOURNAL   Adv. Microb. Ecol. 12, 219-286 (1992)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Ward,D.M., Kopczynski,E.D., Heimbuch,B.K., Bateson,M.M. and
            Weller,R.
  TITLE     Uncultivated cyanobacteria, Chloroflexus-like and Spirochete-like
            inhabitants of a hot spring microbial mat
  JOURNAL   Appl. Environ. Microbiol. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            <1..>877
                     /note="aligns with Escherichia coli 16S rRNA from base
                     pair number 146 to 1068"
                     /note="putative"
                     /citation=[2]
     misc_feature    1..877
                     /phenotype="related to the green nonsulfur eubacterial
                     line of descent"
                     /evidence="EXPERIMENTAL"
                     /citation=[2]
     unsure          replace(31..33,"ss")
                     /note="base may or may not be present"
                     /citation=[2]
     unsure          replace(40..42,"tc")
                     /note="base may or may not be present"
                     /citation=[2]
     unsure          replace(182..184,"tc")
                     /note="base may or may not be present"
                     /citation=[2]
     unsure          replace(315..317,"an")
                     /note="base may or may not be present"
                     /citation=[2]
BASE COUNT      199 a    209 c    306 g    145 t     18 others
ORIGIN      
        1 gggataacgg gccgaaaggt tcgctaatcn sssatacgct cctgcgggag gaaagcggag
       61 angngcactc ggatgngtgc ggcccatcag gttgctggta gggtaaggcc taccaggccg
      121 atgacgggta cctggtctga gaggacgatc aggcagactg ggactgagac acggcccaga
      181 ctcctacggg aggcagcagc aaggaatttt ccgcaatgga cacatgtctg acggagcaac
      241 gccgcgtgca ggacgacggc ttcgggttgt aaactgcttt tgggtgggac gatgatgacg
      301 gtaccacccg aataagnccc ggctaactcc gtgccagcag cngcggtaag acggaggggg
      361 naagngttgt ccggactcac tgggcgtaaa gcgtgcgtag gtggtgcgat gcgtcgctga
      421 aaagssscgg cttaaccggg cgacgggcga cgatacgatc gcactggagg cagggagang
      481 ttggtggaat tccgnntgta gtggtgaaat gcgtagagat ccggaggaat gccggtggcg
      541 taagcggcca acgagtcctg acctgacact gaggcacgaa agcgtgggga gcaaaccgga
      601 ttagataccc gggtagtcca cgccgtaaac gatgtcggct aggtgtgtga tcggggtgac
      661 ccgatggcgt gccgaacgtt acgcggtaag ccgaccgcct ggggactacg agcgcaacgt
      721 taaaactcaa aggaattgac gggggcccgc acaagcagcg gacgtgtggt ttaattcgac
      781 aacgcgaaga accttaccca ggtttgacat gcccctgcaa gcgcacggaa acgtgtgacc
      841 ttcgagggtg gggcaccggt nctgcatggc tgtcgtc
//