From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Lymantria dispar nuclear polyhedrosis virus gene for DNA
Date: 15 Sep 92 10:04:59 GMT
Distribution: bionet
Checksum: 63807    10

LOCUS       NPVDNAP      4803 bp ds-DNA             VRL       15-SEP-1992
DEFINITION  Lymantria dispar nuclear polyhedrosis virus gene for DNA
            polymerase, complete cds.
ACCESSION   D11476
KEYWORDS    DNA polymerase.
SOURCE      Lymantria dispar nuclear polyhedrosis virus (individual_isolate CI
            5-6) DNA.
  ORGANISM  Lymantria dispar nuclear polyhedrosis virus
            Viridae; ds-DNA enveloped viruses; Baculoviridae; Baculovirus;
            Nuclear polyhedrosis viruses.
REFERENCE   1  (bases 1 to 4803)
  AUTHORS   Bjornson,R.M. and Rohrmann,G.F.
  TITLE     Characterization of the nucleotide sequence of the Lymantria dispar
            nuclear polyhedrosis virus DNA polymerase gene region
  JOURNAL   J. Gen. Virol. (1992) In press
  STANDARD  full staff_review
COMMENT     These data kindly submitted in computer readable form by:
            George F. Rohrmann
            Dept. of Agricultural Chemistry
            Oregon State University
            Corvallis, Oregon 97331-6502
            USA
            Phone:  503-737-1793
            Email:  rohrmann@cgrb.orst.edu
            Fax:    503-737-0497
FEATURES             Location/Qualifiers
     CDS             <1..468
                     /note="orf 1"
                     /codon_start=1
                     /translation="ELVVEASGPPQRFVHFDLPFQHERRLARFANSNSARFNLDAVCV
                     NLSRAVSSSSASRLILWSSAVFTDHTSSSTSAALSHRASVYSCRVADEASMKKPLIMA
                     TSSRHRSGVSGRMFSAASLLMQSTSAPRSLLSSSSTEHNLARPRTNRSLMMYF"
     CDS             complement(527..1102)
                     /note="orf 2"
                     /codon_start=1
                     /translation="MASYRYRAPTRYINADVSVDNLLRTIDSMSRQCRSRNETESELA
                     RVRSIITLYRPHLQNRVDLQVAELVLEALMPPNGAQQITHNFNYKYDYNTNSAAAPPR
                     LLSRRAAAPDRRVRRADRPVRTDAPSPPPPPKADAPNPIQQNVYINSAGEAARPSSPR
                     PPPPPASGGGASRSCKWTTPTNWRSRTTTTP"
     TATA_signal     953..956
     CDS             1113..4154
                     /product="DNA polymerase"
                     /codon_start=1
                     /translation="MSSVNLMEWSALKTQLQAGRDAGKARVSIGPADTARITRMTYAD
                     NHLIVFMNARLAKENHRLYQFYAEVRCDLYSYKSCYGTHASATCHRNCTSYKTFVMPG
                     LRDVHTDKLHVVKFKRSDEKRDKNCLDGYLADVNRVHMQTSLLEGQYVRFKNAHACRD
                     YRLSHTAKDVHEFESMLERVQVSALSHEILPVVACYDIETHSDGQRFSAPDADFIISI
                     AVVVRRDAADTRICLFYSPDDPVDLSSSSSSPPAAPDTAAVHFRAERDMIAAFFQLLP
                     LLNADVVLDFNGDKFDLPFLTGRANKLCGPAEAARATKIARYDLSPVNVVTQQSYDKF
                     SNKLHSHYLTYYIHIDLYQFLSTDSEHNDLENFQLNTVAEHYLKKSKVDLPIHDMLQM
                     YGEKRLSRIVEYNVQDCVLPVELFLKLEIADYMYTQCMLLYLCTDDLLRNISHKITVA
                     YFHLALTNTVARRPDPTPDPYFFNKYDLSVTSGASAPSTSRPANAIDLSQLKRTPVDA
                     ARIPPSAVKLCSTRQSCTYKGGKVLSPKPGFNRWVATLDFNALYPTIMMWEGVCMSSN
                     VFIASDGNVYLDKNVNAVNPKLLKTLSEMRVRYKGLRDQCEYNSFYYKLYDKIQNALK
                     RIANSIYGYYGIFFKPLANYITKMGRGKLKEVVGKVEAMSDDPRILREFGLSKINFSV
                     IYGDTDSCFIRVLFDEAEWRRTAARPRSAPSCRTTCAKRSTTLWCGYKMSLENIMLSL
                     ILLKKKKYCYLNNEQRTKYKGWLIKRDMPLFMRKAFRATVDSFSAATRRVRARPARRE
                     MLRYYREFGAPRENLVDYCFSMSYNETSTTAKRRKEEDPARKPVITIAKHCRELLANP
                     GVDFLPGNGDRIQYVLVDVKEKITQKAFPLKLFDPDSPTLQISWLKHMNILCTFMNEL
                     IQVFGNRPEFEHYFGAIVDEYTSAQMYDVRYPVLVPTRRAKAGKSAKKNDSDSDSDSD
                     DDDDPATTPVNYHSLFSMHLKKPKRQAVGEFEPCPQCVARA"
     promoter        complement(1118..1122)
                     /note="late promoter"
     CDS             complement(4492..4713)
                     /partial
                     /note="orf 4"
                     /codon_start=1
                     /translation="MDFFATFFNHVMTSMPVVTKVAYVSMHIKKYLKELERDDKFRDK
                     LVRVLKLFIDKKITLDNMCAILDARTASG"
     promoter        complement(4736..4740)
                     /note="late promoter"
BASE COUNT     1037 a   1435 c   1371 g    960 t
ORIGIN      Map units 52-55 (genome %).
        1 gagctcgtcg tcgaagcgag cgggccgccg cagcgcttcg ttcatttcga cctgccgttt
       61 cagcatgagc gtcgtctcgc gcgattcgcg aactccaatt cggcgcggtt caatctcgac
      121 gcggtctgtg tcaatttgtc gcgcgccgtt tccagctcgt cggcgagccg gctcatcctt
      181 tggtccagcg ccgtcttcac cgaccacacc tcctcctcga cgagcgcggc gctgtcgcac
      241 cgggcgagcg tgtattcttg ccgcgtcgcc gacgaggcga gtatgaaaaa gcccctgatc
      301 atggcgacca gcagccggca cagatcgggc gtgtcggggc ggatgttcag cgccgcctcc
      361 ctgttgatgc agtcgacgag cgcgcccagg tcgttgttga gcagcagttc gaccgaacac
      421 aatttggcga gaccgcgcac gaacaggtcg ttgatgatgt atttctgaga gaccgccacg
      481 agcgtgcgaa ccagccgctt gtacgacacc agcgtgtact cgcgcgtcag ggtgtcgtag
      541 tcgttcttga gcgccaattc gtcggcgtcg tccacttgca tgagcgcgac gcgccgccgc
      601 cgctcgccgg aggaggagga ggccgcgggc tcgacgggcg cgccgcctcg cccgccgaat
      661 tgatgtaaac gttttgctgg atcgggttcg gcgcatcggc cttgggcggc ggcggcggcg
      721 acggggcgtc ggttcggacg gggcgatcgg cgcgccgaac ccgtcggtct ggcgcggcgg
      781 cgcgacggga aagaaggcgc ggaggcgccg ccgcggagtt ggtgttgtag tcgtacttgt
      841 aattgaaatt gtgagtgatc tgctgggcgc cgttgggcgg catcagcgcc tcgaggacca
      901 actcggcgac ctgcagatcg acgcggttct gcagatgggg ccgatacagg gttataatag
      961 aacggacgcg agctagctcg gattcagtct cgtttcgact tcggcactga cgactcatcg
     1021 agtcgatcgt gcgcagcaga ttgtcgacgc tcacgtcggc gttaatatac ctggtcggcg
     1081 cgcggtatcg gtacgacgcc ataatatcga gaatgtcgtc cgtgaacctt atggaatggt
     1141 cggcgttaaa aacccaactg caggccggcc gcgacgccgg caaggcgcgc gtctccatcg
     1201 ggccggcgga cacggcgcgc ataacgcgca tgacctacgc cgacaaccat ttgattgtct
     1261 ttatgaacgc gcgtctggcg aaggagaatc ataggctgta ccaattctac gccgaggtgc
     1321 gctgcgacct gtactcgtac aagtcgtgct acggcacgca cgccagcgcc acctgccatc
     1381 gcaactgcac cagctacaag acgttcgtga tgccggggct gcgcgacgtg cacacggaca
     1441 agctgcacgt cgtcaaattc aagcgctccg acgaaaagcg cgacaagaac tgcctcgacg
     1501 gctatctcgc cgacgtcaat cgcgtgcaca tgcagacctc gctgctcgag gggcagtatg
     1561 tgcgattcaa gaacgcgcac gcctgtcgcg actatcggct gagccacacc gccaaggacg
     1621 tgcacgagtt cgagagcatg ctggagcgcg tgcaggtgtc ggcgctgtcg cacgaaatcc
     1681 taccggtggt cgcctgctac gacatcgaaa cgcactcgga cggccagcgc ttctccgcgc
     1741 cggacgccga tttcatcatc tcgatagcgg tggtggtgcg tcgggacgcg gccgacacgc
     1801 gcatatgcct gttctactcg cccgacgacc ccgtcgacct gagctcgtcg tcgtcgtcgc
     1861 cgccggcggc gccggacacc gcggccgtgc actttcgcgc cgagcgcgac atgatcgcgg
     1921 ccttttttca attgctgccc ctgctcaacg ccgacgtcgt tttggacttc aacggcgaca
     1981 agttcgacct gccctttctc acgggccggg cgaacaagct gtgcgggccg gccgaagcgg
     2041 cgcgcgcgac caagatcgcc cgctacgacc tgtcgccggt gaacgtggtc acgcagcagt
     2101 cctacgacaa gtttagcaac aagctgcact cgcactattt gacgtactac attcacatcg
     2161 atctgtacca attcctgagc accgactcgg agcacaacga cctcgagaac tttcaactga
     2221 acacggtcgc cgagcattat ttgaagaaga gcaaggtgga cttgccgatc cacgacatgc
     2281 tgcagatgta cggggagaag aggctgagcc gcatcgtcga gtacaacgtg caggattgcg
     2341 tgctgccggt cgagctgttc ctcaagctgg agatcgccga ttacatgtac acgcagtgca
     2401 tgctgttgta cttgtgcacc gacgacctgc tgcgcaacat ctcgcacaaa atcacggtgg
     2461 cctactttca cttggcgctg accaacaccg tcgcgcgccg acccgacccg acgcccgatc
     2521 cgtacttttt caacaagtac gatctgagcg tcacgtcggg cgcaagcgcg ccttcaacga
     2581 gccgcccagc gaacgccatc gacctgtccc aactgaagcg cacgcccgtc gacgcggccc
     2641 gcataccgcc gtcggcggtc aagctgtgct cgacccggca atcgtgcacc tacaagggcg
     2701 gcaaagtgct gtcgcccaag cccggtttca acaggtgggt ggccacgctc gatttcaacg
     2761 cgctgtatcc caccatcatg atgtgggagg gcgtgtgcat gtcgtcgaac gtgttcatcg
     2821 ccagcgacgg caacgtgtac ctggacaaga acgtcaacgc cgtgaacccc aaactgttga
     2881 agacgctcag cgaaatgcgc gtccgttaca aggggctgcg cgaccagtgc gagtacaact
     2941 cgttttacta taaactgtac gacaagatcc agaacgcgct caagcgcatc gccaacagca
     3001 tctacggcta ctacgggata tttttcaaac cgctcgccaa ctacatcacc aagatgggcc
     3061 gcggcaagct caaggaggtc gtcggcaagg tggaggccat gagcgacgac ccgcgcatac
     3121 tgcgcgagtt tggcctgtcg aaaataaact tctccgtcat atacggcgac acggattcgt
     3181 gtttcatacg cgtgctgttc gacgaggccg agtggcgccg gaccgccgcc agaccgcgat
     3241 ccgctccatc gtgcaggacc acgtgtgcaa aacgctcaac gactctgtgg tgcggctaca
     3301 agatgtcgct cgagaacata atgctcagtt tgattttgct gaaaaagaaa aagtattgct
     3361 acctcaacaa cgaacagcgc accaagtaca agggctggct gatcaagcgc gacatgcccc
     3421 tgttcatgcg caaggccttt cgcgcgacgg tggactcgtt ctccgcggcc actcgacgcg
     3481 tgcgcgctcg gcctgctcgc cgagagatgc tgcgctacta tcgcgagttc ggcgccccgc
     3541 gggagaatct ggtcgactac tgcttcagca tgtcctacaa cgagacctcg acgacggcca
     3601 agcgccgcaa agaggaggac ccggcgcgca agcccgtcat caccatagcc aaacactgcc
     3661 gggagctgct ggccaacccg ggcgtcgact ttctgcccgg caacggcgat cgcatccagt
     3721 acgtgctcgt cgacgtcaaa gagaagatca ctcagaaggc gttcccgctc aagctgttcg
     3781 accccgacag tcccactctg cagatcagct ggctcaagca catgaacatt ttgtgcacgt
     3841 tcatgaacga gctgattcag gtgttcggca accggcccga gttcgaacac tatttcggcg
     3901 cgatcgtcga cgagtacacg tcggcccaaa tgtacgacgt gcgctatccc gtcttggtgc
     3961 cgacccgacg cgccaaagcc ggcaaatcgg caaaaaaaaa tgacagcgac agcgacagcg
     4021 acagcgacga cgacgacgac ccggcgacga cgcccgtcaa ctatcacagc ctgttctcca
     4081 tgcatttgaa gaagcccaaa agacaagccg tcggcgagtt cgagccgtgt cctcagtgcg
     4141 tcgcgcgcgc gtgaatgtgt cgggcgcgtg cataataaaa tactatggtg ttgtaaaata
     4201 aatatattgt attaaacatt aatattgtat taaacattaa tattgtatta aacattaata
     4261 ttgtataaaa atatggtaaa taaataatat tgtataaaaa tatggtaaat aaaatttgaa
     4321 ttgcgctaac cgcaaattat ggcattgttt atttcgtgga ccaaaaactc tgacaaataa
     4381 tcgacggcct cgtcgccgat gtgctgctcg cgtccacgta cccgctgcag caactccatc
     4441 acgtggcgtt gtagtagacg cggtcgcaaa agtattgtat ttgcgagcgc gtcagccgga
     4501 cgccgtccgt gcgtccaaga tggcgcacat gttgtccagg gtgatttttt tgtcgatgaa
     4561 gagtttcaga acgcgcacca gcttgtcgcg aaacttgtcg tcgcgctcca gctctttgag
     4621 gtattttttt atgtgcatgg acacgtacgc cactttggtc acgacgggca tcgaggtcat
     4681 cacatgattg aaaaaagtgg caaaaaaatc catgctaatc ggtagagctg gtgttcttat
     4741 ttaaaattgc gtcaaacgct ctctccagat ctcttttctt ttttatactc ttagctttag
     4801 gcc
//