From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: orf A, orf C [Plectonema, PCC 6402, pRF1, Plasmid Complete, 7
Date: 31 Dec 92 01:31:37 GMT
Distribution: bionet
Checksum: 15360 8

LOCUS       S116130      4194 bp    DNA   Circular  NLM       16-DEC-1992
DEFINITION  orf A, orf C  [Plectonema, PCC 6402, pRF1, Plasmid Complete, 7
            genes, 4194 nt]
ACCESSION   S46711
KEYWORDS    .
SOURCE      Plectonema pRF1 PCC 6402
  ORGANISM  Plectonema
            Unclassified.
REFERENCE   1  (bases 1 to 4194)
  AUTHORS   Perkins,D.R. and Barnum,S.R.
  TITLE     DNA sequence and analysis of a cryptic 4.2-kb plasmid from the
            filamentous cyanobacterium, Plectonema sp. strain PCC 6402.
  JOURNAL   Plasmid 28, 170-176 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 116130] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 1.
FEATURES             Location/Qualifiers
     CDS             complement(986..1195)
                     /note="Description: orf F"
     CDS             1255..1476
                     /note="Description: orf B"
     CDS             complement(298..555)
                     /note="Description: orf G"
     CDS             2348..3229
                     /note="Description: orf D"
     CDS             complement(3535..3825)
                     /note="Description: orf E"
     CDS             958..1136
                     /note="corresponding protein is not presented.
                     Description: orf A;  Author-provided coding region
                     translates with internal stops for reasons explained in
                     citation."
     CDS             1382..1831
                     /note="Description: orf C;  Rep B homolog;  For the
                     protein sequence (NCBI gibbsq 116137):  Method: conceptual
                     translation supplied by author.  This sequence comes from
                     Fig. 2."
                     /codon_start=1
                     /translation="MNQSFSRMTKLKDWQALGYLRTTEVTRGRDGKSAHPHFHCLLMV
                     KASYFGRNYISQAEWVELWKKSLRVDYNPILDVQALKTESSLVGLLAEIIKYQCKPND
                     LVLSDRDWFLELTRQLHRTKAIAFGGIFKEYFRELETRFLMKRCLVR"
BASE COUNT     1097 a    850 c    982 g   1265 t
ORIGIN      
        1 ttctgctcaa aacgttttga gcaacagcgc gactaaactt acacaaaacg ttttgtgtgt
       61 aaacagagcg ttacccaaaa tgttttgggt agaagcaata tcgccgggaa gggttcaacc
      121 cttccagaaa tcggtaatga ctggcaatgg cacgatcttg gagtactcaa aacgttttga
      181 gtactccaag atttgaatcg caacggttgc gggtttggta attcaaagct ttgcccaaaa
      241 cgttttgggc aacagctcga tcgagaattt gtggtcgttg caacccatgt tgatttttta
      301 gaggttgaag aacctagaaa tccaaaccca gatttttgct acccacccga aactgtatgg
      361 aattttagct ttgatctctc ctaatacgat tccttggctg acgcatttca ttttctgttg
      421 agcttcctcg taggattcag ctgtgatttc aaaacaccat gtcgcgcctt tatatcggta
      481 ttcacacaga aatgtttttt ctcgactaca atctagtgat tcatttgtat taactttgaa
      541 aggaagttga ttcatggctt attacgttta tcaagacaag gctggtgagt gtggcgctgg
      601 tatctaaaag cagctaataa caggaagctt gctgactctg gtgaagggta taaaaacaag
      661 caggattgct acaacgcgat cgggatggtt tcaacgtctg gcaattctcc tgtttatgaa
      721 atctaatttt gtgggtgttg cgaagcggtt cgccttcact tgaacctctt agagaagttt
      781 gcttacggat tgatccgtaa gcaaacttct tacaggacgg gcaactcacg caatttgggg
      841 cgtaatcgaa gcgtaatttc tgtgatgggg gaaagcacta aaaaaccgct gtacactggt
      901 aacaaccacg aaaccaagta aatacaacgg ctttttatgt ctggaacaac cccggagatg
      961 ctgttatgtc tagtgtatcg tctcgtcacg agacagccaa taggacaaca gcactttctg
     1021 acctctcaga acgagatcgg tgtgggattc tcaccgtagt agcagcgata aagttgcagg
     1081 acattatcgc ggaaccgagt tcgatgctat gcggaacgga ttcactattg cagtgatttt
     1141 ttggacttcc ggttagtccc agatcaggac agctcctacc gtttgaagtt ggcatctgca
     1201 cgattttgtc attgccgaca atgcattgta tgttcctggc gcagaagtct cgcaatgaag
     1261 gcgagggctt ataagacttt gcccaaagta gttgctgact atccgactgc acgatacctt
     1321 ttcctcacgc tgacagtgaa gaactgcgcg attaccgacc cgtctgcgga cactcaaatg
     1381 gatgaatcag tcattttcca gaatgacaaa gctcaaagat tggcaggctt tgggctatct
     1441 ccgaacaaca gaagtgacgc ggggaagaga cggtaagtca gcacaccctc atttccactg
     1501 cctattgatg gtaaaagctt cctatttcgg tcggaactac atttctcagg ctgaatgggt
     1561 agaactatgg aagaagtcgt tgcgagtgga ctacaaccca attttggatg ttcaagcgct
     1621 taaaacagag tcttccttgg ttgggctgtt agcagaaatc attaagtacc aatgcaagcc
     1681 aaatgattta gtgctatcag atcgtgattg gtttttggaa ctgactaggc aacttcaccg
     1741 aacgaaagcg atcgcatttg gaggaatttt caaagagtac ttccgtgaat tagagacaag
     1801 atttctgatg aagagatgct tggtcagata gcccaagccg gagaggttga tgagggacac
     1861 ctctattttg gctggaacgc gtaaagagaa gaagtaccga atgattgata acaatgtata
     1921 acagcgttat caattatgta gtttgtgtat accaaagaaa tttgttatca ctcttgataa
     1981 catggttgaa attctttctg tacgtatatg cagttttccg aagatctgct cattgaatcc
     2041 ccgactgccc gtaatgaggg agtcctagaa atcaaatcgt caatccaggg agcaagagat
     2101 tcttaacaag gtgaaagtct tgttgtttgc tgtctgggat ggaaccccac gaatgtggcg
     2161 gcagagttgg cagattttta tgaagtctcg ctggatgccg taaaaaacta ccagcggttc
     2221 agggatgagt ttgagcttga tggagtaaaa gtcgtgcgtg gtaaggattt gaagaggtta
     2281 agacatcttg tccttaacct ccttcactcc tcaggaggtt atttacaccc ctgctggtgc
     2341 gttgagaatg ggatttattc tccgcgattc acctgtagcg aaggcggtta gaacagcagc
     2401 gattcgagtc atccaaggtg tgagtgattt cttcgaccct gccactgcgt ttgcgaaatt
     2461 ggttgagggt cattccgggc ttgaccaatt ttctgaaaat cagcagccta aaattgccgc
     2521 tttgtacgaa gaggggattt ttaaggatgc ttgcaaagct ttgcggaaaa aatatccaga
     2581 tggaaaactt ccaggactgg gcgtagaaca gttgaaggaa ttttttgctt tgttcgccac
     2641 ttatacagat cgttgggtgt tacgcaccga tctggaatta agcagctctc atgcgcctga
     2701 cagatatggc tatcctcatc taacctctga ttcttttcct gtagaggttg atgggcaagt
     2761 caagcaggct gtgatcatgt ttcagttctg tgatttcctg gttgatgatc ggtatgttgc
     2821 tgattgtgat agtcgtagat acatcaaatc agtcaagaac ctgcctggcg tagatttagc
     2881 gtggctgttc tttgtttccc cgtttggtgc tacacctgct gccgtgaaat ttatcgagca
     2941 ggagattcgc cctgactctc aaggttacgt aggggttatt ctggttaaag acttagctaa
     3001 ttttctgttt gctcaagctt cccagaatcg caatagcaat cttctcattg gcgagatcaa
     3061 caagaagttt agtaagctta tgggctatga gattccggta gtcgagatgg caactcagta
     3121 tagttgttct agttatcatc aacgttatcg atttgataac gttctggttc ttgtagacat
     3181 cccagaacaa ttcttgtctt tttctacctg gtgtttctgg gcgctttgag agaacaatgg
     3241 tgtagaaacc tatttgtgct gtctgctttt ttgactgttt agtgttgttg actttgtttt
     3301 tcagtctctt tgggtcttcc tgctctaacc caggaagttt caagacttct actgttctta
     3361 gcgttccaag gaatgctcta tgaggtaggc tttcttcttt gttatcagtt atgttatcaa
     3421 cctcattatc aaagttctga atgataactt cttcatcctc gtctttgcta cttaggatgt
     3481 tatcaagatg gttatcagat acgataacat cttgaaggtc taatggaatc tgatctattt
     3541 tttccttgct gtcctgcttg acgtagatgt gtctagctga ccagcaaaca agcttctcaa
     3601 atcctgagcg tctcgctcta agatttcaaa ctttttttct aaagtctcaa tcctctcagc
     3661 tcctacctca ctcaatgcag ttggtagctc gattggatgg ttaacgtagt tagagagagc
     3721 cttgattaga atgtctgtct tcgattcatt cgtctgctgt cgatactcct ccaaagcatt
     3781 gtaaagactc tgaggaatgc gaccggagaa aaaaggtcta gtcatgctcg ttatcgattt
     3841 cgataactta atgataacag atagtgttct cttgcatctt tcttcgataa caattgataa
     3901 caatgttatc aaggcaagtc aagggatcgt ggaatagcgg actgagcggt aggagagcat
     3961 atgccgcgaa acgccttgac ggcagattga accgctacac tcttgggctg ttccgagggc
     4021 tgatagatgc gttgtgtagt tgttattgat ttgatagcag ccctcggaac atgccacgcg
     4081 gcgagcggtc tttctctgaa atcaagcaat cttgcaatca aacaatcaaa caatcttgca
     4141 actttgtgac tttgtgactt tgtgactttg tgaccttttc agattgattt agaa
//