From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bovine viral diarrhea virus nonstructural proteins (p125/p80, p20)
Date: 31 Dec 92 01:43:38 GMT
Distribution: bionet
Checksum: 51121 5

LOCUS       BVDP20A      2480 bp ds-RNA             VRL       18-DEC-1992
DEFINITION  Bovine viral diarrhea virus nonstructural proteins (p125/p80, p20)
            partial cds.
ACCESSION   M96639
KEYWORDS    autoprotease; nonstructural protein; protease.
SOURCE      Bovine viral diarrhea virus (individual_isolate CP6) (library:
            lambda ZAPII) cDNA to genomic RNA.
  ORGANISM  Bovine viral diarrhea virus
            Viridae; ss-RNA enveloped viruses; Pestiviridae.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Meyers,G., Tautz,N., Stark,R., Brownlie,J., Dubovi,E.J.,
            Collett,M.S. and Thiel,H.-J.
  TITLE     Rearrangement of viral sequences in cytophaogenic pestiviruses
  JOURNAL   Virology 191, 368-386 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1192..1696
                     /gene="p20"
                     /partial
                     /codon_start=1
                     /translation="MELNTNELLYKTYKQKPAGVEEPVYDQAGNPLFGERGVVHPQAT
                     LKLPHKRGESEVPTDLASLPKRGDCMSGNSKGPVSGIYLKPGPLFYQDYKGPVYHRAP
                     LELFQETSMCETTRWIGRVTGSDSKLYHIYVCIDGCIIIKSATKDHQKVFKWVHNKLN
                     CPLWVTSC"
BASE COUNT      791 a    505 c    640 g    544 t
ORIGIN      
        1 acacacacgg cactttacaa gagtattgcc gcaagattgg gacatgaaac agcattcgct
       61 acgctagtgg tgaagtggct agccttcgga ggtgagtcgg tgtcagatca tgtgagacag
      121 gcggccgttg acctggtcgt ttattatgtg atgaataaac cttccttccc tggagattcc
      181 gaaacccaac aggagggaag gcgattcgtc gccagcttat ttatctccgc tctggcaacc
      241 tacacataca agacttggaa ttaccacaac ctctccaagg tagtagaacc agccttggca
      301 tacctcccct acgctaccag tgcactaaaa atgttcaccc caactaggct ggagagcgta
      361 gtcatactta gcaccacaat atacaaaact tacctctcaa taaggaaagg aaaaagtgat
      421 ggacttctgg gtacagggat tagtgcagca atggagattc tgtcacagaa cccggtgtca
      481 gtaggtatat ctgtcatgct gggggtgggg gcaattgccg ctcacaatgc aatcgagtct
      541 agtgagcaaa aaaggaccct attgatgaaa gtgtttgtaa aaaacttcct ggaccaggcg
      601 gcaacagatg agttggtgaa ggaaaatcca gagaaaataa taatggcctt atttgaagca
      661 gtacagacaa ttggcaaccc attgaggctt atatatcatc tgtatggggt ttactacaaa
      721 ggctgggaag cgaaagaact atccgagagg acagctggca ggaacctgtt cactttgata
      781 atgttcgaag ctttcgaact attagggatg gactctgaag ggaagataag gaacctatct
      841 gggaattaca tcttggattt gatctacagt ttacataaac agataaacag aggcttgaag
      901 aagatagtct tggggtgggc tcctgcaccc ttcagttgtg actggactcc tagtgatggg
      961 agaatcaggt tacccacaga caactatctg agagtagaga ctaagtgccc atgtggttat
     1021 gagatgaaag cactaaggaa tttcagtggc agtctcacaa aagtggaaga gaaagggcct
     1081 ttcctctgta ggaacgggcc tggtaggggg ccagttaact atagagtcac aaagtactat
     1141 gatgacaacc tcacagagat aaaaccagtt gcaaaactag aaggactgca catggagttg
     1201 aacacaaatg aacttttata caaaacatac aaacaaaaac ccgctggagt ggaggaacca
     1261 gtatatgacc aagcaggtaa ccctttgttt ggcgagaggg gagtggttca tccgcaggca
     1321 acgctaaaac tgccacataa aagaggggag agcgaagtcc ctactgatct ggcatccttg
     1381 ccaaaaagag gtgactgcat gtcaggtaac agcaaagggc ccgtgagtgg gatctatctg
     1441 aaaccggggc cgttattcta ccaggattac aagggacccg tctatcatag agctccattg
     1501 gagttatttc aggaaacctc tatgtgcgag acaactagat ggattgggag agtaactggt
     1561 agtgatagca aattgtacca catctatgtg tgcatagatg gatgcataat aattaagagt
     1621 gccacaaaag atcaccaaaa ggtattcaaa tgggtccata acaaactaaa ttgcccttta
     1681 tgggttacaa gctgcgggcc tgccgtgtgc aagaaaatca ctgagcacga aaaatgccat
     1741 gtcagcatac tagacaaact gactgcgttt ttcggggtta tgccaagagg aactacacca
     1801 agggctccgg tgagattccc aacagcattg ctaaaggtga ggaggggact ggaaaccggt
     1861 tgggcttaca cacatcaagg tggtataagc tcagtagacc atgtgaccgc aggtaaagat
     1921 ctattggtct gtgatagtat gggtaggact agagtggttt gccaaagcaa caacaagtta
     1981 actgatgaga cagaatatgg tgtcaagacg gactccggat gtccagatgg agccaggtgc
     2041 tatgtattaa atccagaggc agtaaatata tcagggtcca agggagctgt cgtacacctc
     2101 caaaaaacag gaggggaatt tacatgtgtc actgcatcag gcactccggc cttctttaac
     2161 ctaaaaaatt taaagggatg gtcgggtcta cccatatatg aggcttccag cggcagagtg
     2221 gtcggcagag ttaaagtagg aaaaaatgag gagtccaaac ccacaaaatt aatgagtggt
     2281 atacaaaccg tctcaaaaag cacggccgac ttaacagaaa tggtcaagaa gataaccagc
     2341 atgaacaggg gagactttaa gcagataacc cttgcaacag gggcagggaa aactacagaa
     2401 ctcccaaagg cagtgacaga ggagatagga cgacacaagc gggtgctagt acttatacca
     2461 ttgagagcag cagctgagtc
//