HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus (BM12) envelope glycoprotein (env)
Date: 6 Nov 92 18:35:07 GMT
Distribution: bionet
Checksum: 46855 2

LOCUS       SIVVRC        360 bp ss-RNA             VRL       02-NOV-1992
DEFINITION  Simian immunodeficiency virus (BM12) envelope glycoprotein (env)
            gene, partial cds.
ACCESSION   L05113
KEYWORDS    envelope glycoprotein; variable region.
SOURCE      Simian immunodeficiency virus (individual_isolate J150, strain 32H
            (reisolate of SIVmac251)) blood cDNA to genomic RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Almond,N.M., Jenkins,A.R., Heath,A.B. and Kitchin,P.A.
  TITLE     Sequence variation in the env gene of Simian immunodeficiency virus
            recovered from immunised macaques is predominantly in the V1 region
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <130..>358
                     /note="V2 region"
                     /gene="env"
                     /product="envelope glycoprotein"
                     /codon_start=1
                     /translation="CTGLEQEQMIGCKFNMTGLKRDKTKEYNETWYSTDLVCEQGNST
                     DNESRCYMNHCNTSVIQESCDKHYWDTIRFRY"
     CDS             <1..>129
                     /note="V1 region"
                     /product="envelope glycoprotein"
                     /codon_start=1
                     /translation="CNKSETDKWGLTKSLTTTAPTAPTAASKIDMVNETSSCITHDN"
BASE COUNT      141 a     56 c     75 g     88 t
ORIGIN      
        1 tgcaataaaa gtgagacaga taaatgggga ttgacaaaat cattaacaac aacagcacca
       61 acagcaccaa cggcagcatc aaaaatagac atggtcaatg agactagttc ttgtataact
      121 catgataatt gcacaggctt ggaacaagag caaatgatag gctgtaaatt caacatgaca
      181 gggttaaaaa gagacaagac aaaggagtac aatgaaactt ggtactctac agatttggtt
      241 tgtgaacaag ggaatagcac tgataatgaa agtagatgct acatgaatca ctgtaacact
      301 tctgttatcc aagagtcttg tgacaaacat tattgggata ctattagatt taggtattgt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: spi=spitz [Drosophila, Genomic/mRNA, 82 nt, segment 2 of 4]
Date: 5 Nov 92 22:58:51 GMT
Distribution: bionet
Checksum: 31037 1

LOCUS       M231486S2      82 bp                    NLM       20-OCT-1992
DEFINITION  spi=spitz [Drosophila, Genomic/mRNA, 82 nt, segment 2 of 4] 
ACCESSION   S41744 M95199
KEYWORDS    .
SEGMENT     2 of 4
SOURCE      Drosophila
  ORGANISM  Drosophila
            Unclassified.
REFERENCE   1  (bases 1 to 82)
  AUTHORS   Rutledge,B.J., Zhang,K., Bier,E., Jan,Y.N. and Perrimon,N.
  TITLE     The Drosophila spitz gene encodes a putative EGF-like growth factor
            involved in dorsal-ventral axis formation and neurogenesis.
  JOURNAL   Genes Dev. 6, 1503-1517 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 110703.
            This sequence comes from Fig. 3.
BASE COUNT       13 a     16 c     22 g     31 t
ORIGIN      
        1 tgttttttcg tgtgcgcggt gtgcgttgtc ggcgttctgc cccctaatgt tgtccaagtt
       61 taaatgcaaa cagttggtaa tt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (10191.c.1) RNA.
Date: 5 Nov 92 23:07:03 GMT
Distribution: bionet
Checksum: 02997 1

LOCUS       HIV191C1X      56 bp ss-RNA             VRL       22-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (10191.c.1) RNA.
ACCESSION   L03470
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 56)
  AUTHORS   McNearney,T., Hornickova,Z., Markham,R., Birdwell,A., Arens,M.,
            Saah,A. and Ratner,L.
  TITLE     Relationship of human immunodeficiency virus type 1 sequence
            heterogeneity to stage of disease
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
BASE COUNT       21 a      7 c     13 g     15 t
ORIGIN      
        1 ctgttaaatg gcagtctagc agaagaagag gtagtaatta gatctgaaaa tttcac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Hylobates lar glycophorin-gene related sequence.
Date: 6 Nov 92 18:28:29 GMT
Distribution: bionet
Checksum: 13578 1

LOCUS       GIBGLYCOA     110 bp ds-DNA             PRI       02-NOV-1992
DEFINITION  Hylobates lar glycophorin-gene related sequence.
ACCESSION   L05166
KEYWORDS    glycophorin.
SOURCE      Hylobates lar DNA.
  ORGANISM  Hylobates lar
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hylobatidae.
REFERENCE   1  (bases 1 to 110)
  AUTHORS   Rearden,A., Magnet,A., Kudo,S. and Fukuda,M.
  TITLE     Glycophorin B and glycophorin E genes arose from the glycophorin A
            ancestral gene via two duplications during primate evolution
  JOURNAL   J. Biol. Chem. (1992) In press
  STANDARD  full automatic
BASE COUNT       21 a     20 c     20 g     49 t
ORIGIN      
        1 ttcataattt tgctgttctc tttatctcct gtagtgataa cactcataat ttttggggtg
       61 atggctggtg ttattggaac gatcctctca atttcttact gtatttgcct
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human CD19 gene, exons 10-12.
Date: 6 Nov 92 18:06:28 GMT
Distribution: bionet
Checksum: 30667 2

LOCUS       HUMCD19W05    411 bp ds-DNA             PRI       28-OCT-1992
DEFINITION  Human CD19 gene, exons 10-12.
ACCESSION   M62548
KEYWORDS    CD19; cell surface antigen.
SEGMENT     5 of 6
SOURCE      Human DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Zhou,L.-J.J., Ord,D.C., Omori,S.A. and Tedder,T.F.
  TITLE     Structure of the genes encoding the CD19 antigen of human and mouse
            B lymphocytes
  JOURNAL   Immunogenetics 35, 102-111 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     exon            13..81
                     /number=10
                     /product="CD19"
                     /gene="CD19"
     exon            182..238
                     /number=11
                     /product="CD19"
                     /gene="CD19"
     exon            327..383
                     /number=12
                     /product="CD19"
                     /gene="CD19"
BASE COUNT       91 a    113 c    124 g     83 t
ORIGIN      
        1 cttctccacc agatggcagc ggctacgaga accctgagga tgagcccctg ggtcctgagg
       61 atgaagactc cttctccaac ggtaacttgg ggcctttgtg ggacctcaga gacttaggtg
      121 taattgcagc cctgtgacac tcctagaagg ggtccctgga gttctctctc ttctgccaca
      181 gctgagtctt atgagaacga ggatgaagag ctgacccagc cggtcgccag gacaatgggt
      241 gtgtgtgagg atggcaacag tccagggggg aggcggagga cacctggagg ccaggaggaa
      301 tagtaacctc cctctacccc ttaaagactt cctgagccct catgggtcag cctgggaccc
      361 cagccgggaa gcaacctccc tgggtgagag atgctttcaa tcagactgcc t
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (10191.b.7) RNA.
Date: 5 Nov 92 23:06:59 GMT
Distribution: bionet
Checksum: 44850 1

LOCUS       HIV191B7X      56 bp ss-RNA             VRL       22-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (10191.b.7) RNA.
ACCESSION   L03466
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 56)
  AUTHORS   McNearney,T., Hornickova,Z., Markham,R., Birdwell,A., Arens,M.,
            Saah,A. and Ratner,L.
  TITLE     Relationship of human immunodeficiency virus type 1 sequence
            heterogeneity to stage of disease
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
BASE COUNT       21 a      7 c     13 g     15 t
ORIGIN      
        1 ctgttaaatg gcagtctagc agaagaagag gtagtaatta gatctgaaaa tttcac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (10304.F.15) RNA.
Date: 5 Nov 92 23:08:05 GMT
Distribution: bionet
Checksum: 39504 1

LOCUS       HIV304F15X     56 bp ss-RNA             VRL       22-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (10304.F.15) RNA.
ACCESSION   L03447
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 56)
  AUTHORS   McNearney,T., Hornickova,Z., Markham,R., Birdwell,A., Arens,M.,
            Saah,A. and Ratner,L.
  TITLE     Relationship of human immunodeficiency virus type 1 sequence
            heterogeneity to stage of disease
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
BASE COUNT       20 a      7 c     13 g     16 t
ORIGIN      
        1 ctgttaaatg gcagtctagc agaagaagag gtagtaatta gatctagtaa tttcac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Geodermatophilus obscurus 23S rRNA gene insertion sequence.
Date: 6 Nov 92 18:28:27 GMT
Distribution: bionet
Checksum: 08987 2

LOCUS       GED23RRNAA    111 bp ds-DNA             BCT       02-NOV-1992
DEFINITION  Geodermatophilus obscurus 23S rRNA gene insertion sequence.
ACCESSION   M85115
KEYWORDS    23S ribosomal RNA; insertion.
SOURCE      Geodermatophilus obscurus (library: ATCC 25087) DNA.
  ORGANISM  Geodermatophilus obscurus
            Prokaryotae; Firmicutes; Thallobacteria; Actinomycetes and related
            organisms; Actinomycetes with multilocular sporangia.
REFERENCE   1  (bases 1 to 111)
  AUTHORS   Roller,C., Ludwig,W. and Schleifer,K.H.
  TITLE     Gram-positive bacteria with a high DNA G+C content are
            characterized by a common insertion within their 23S rRNA genes
  JOURNAL   J. Gen. Microbiol. 138, 1167-1175 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1..111
                     /standard_name="23S rRNA insertion"
                     /note="this span absent in E. coli; located between
                     helices 54 and 55"
                     /product="23S ribosomal RNA"
BASE COUNT       22 a     33 c     37 g     19 t
ORIGIN      
        1 cgcccatgct gaacccagcg atgctaaccg cccgaacacc cgcggtctgg ttctttcgag
       61 gatcggatgc ggggactagc gcgggatccg gactggtagt aggcaagcga t
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (10304.F.12) RNA.
Date: 5 Nov 92 23:07:57 GMT
Distribution: bionet
Checksum: 38733 1

LOCUS       HIV304F12X     56 bp ss-RNA             VRL       22-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (10304.F.12) RNA.
ACCESSION   L03444
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 56)
  AUTHORS   McNearney,T., Hornickova,Z., Markham,R., Birdwell,A., Arens,M.,
            Saah,A. and Ratner,L.
  TITLE     Relationship of human immunodeficiency virus type 1 sequence
            heterogeneity to stage of disease
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
BASE COUNT       20 a      7 c     13 g     16 t
ORIGIN      
        1 ctgttaaatg gcagtctagc agaagaagag gtagtaatta gatctagtaa tttcac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human ADH2 gene (allele 2) for alcohol dehydrogenase beta-2 exon 2
Date: 6 Nov 92 18:28:52 GMT
Distribution: bionet
Checksum: 40144 2

LOCUS       HUMADH222     132 bp ds-DNA             PRI       02-NOV-1992
DEFINITION  Human ADH2 gene (allele 2) for alcohol dehydrogenase beta-2 exon 2
            (EC 1.1.1.1).
ACCESSION   X15448
KEYWORDS    ADH2 gene; alcohol dehydrogenase.
SEGMENT     2 of 7
SOURCE      Homo sapiens.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 132)
  AUTHORS   Yokoyama,S.
  JOURNAL   Unpublished (1989) see COMMENT for author address
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 132)
  AUTHORS   Matuso,Y., Yokoyama,R. and Yokoyama,S.
  TITLE     The genes for human alcohol dehydrogenases beta 1 and beta 2 differ
            by only one nucleotide
  JOURNAL   Eur. J. Biochem. 183, 317-320 (1989)
  STANDARD  full automatic
COMMENT     see x15447
               [1] Author address Yokoyama S., University of Illinois at
            Urbana-Champaign, Shelford Vivarium, 606 East Healey Street,
            Champaign, IL 61820 USA.
               Submitted (31-MAY-1989) to the EMBL Data Library by:
FEATURES             Location/Qualifiers
     intron          <1..15
                     /note="Intron I (approx. 2.8 kb)"
                     /gene="ADH2"
     exon            16..117
                     /note="alcohol dehydrogenase beta-2 (AA 7 - 40)"
                     /gene="ADH2"
     intron          118..>132
                     /note="Intron II (approx. 0.6 kb)"
                     /gene="ADH2"
BASE COUNT       36 a     21 c     32 g     43 t
ORIGIN      
        1 tgtttgattt tctaggtaat caaatgcaaa gcagctgtgc tatgggaggt aaagaaaccc
       61 ttttccattg aggatgtgga ggttgcacct cctaaggctt atgaagttcg cattaaggtg
      121 aaatattttt cc
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human fast skeletal muscle myosin light chain 1 (MLC1) gene, exon
Date: 6 Nov 92 18:07:12 GMT
Distribution: bionet
Checksum: 58182 3

LOCUS       HUMMLC1       946 bp ds-DNA             PRI       28-OCT-1992
DEFINITION  Human fast skeletal muscle myosin light chain 1 (MLC1) gene, exon
            1.
ACCESSION   J05026
KEYWORDS    myosin; myosin light chain 1.
SOURCE      Human adult skeletal muscle (cell line leukocyte) DNA, clones
            pMLC1p[1,7,1p7/2].
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Seidel,U. and Arnold,H.H.
  TITLE     Identification of the functional promoter regions in the human gene
            encoding the myosin alkali light chain MLC1 and MLC3 of fast
            skeletal muscle
  JOURNAL   J. Biol. Chem. 264, 16109-16117 (1989)
  STANDARD  full automatic
COMMENT     Draft entry and computer-readable copy of sequence [1] kindly
            submitted by H.H.Arnold, 16-AUG-1989.
FEATURES             Location/Qualifiers
     exon            255..516
                     /number=1
                     /gene="MYL1"
     intron          517..>946
                     /note="MLC1 intron A"
     CDS             385..516
                     /partial
                     /gene="MYL1"
                     /product="myosin light chain 1"
                     /codon_start=1
                     /translation="MAPKKDVKKPVAAAAAAPAPAPAPAPAPAPAKPKEEKIDLSAIK
                     "
BASE COUNT      291 a    199 c    184 g    272 t
ORIGIN      1 bp upstream of SalI site.
        1 gtcgacctgc aggtcaacgg atctgaagct ggctttgtca tatatctttc tcctttatat
       61 atggaggtgg gggggggaga aaaaaaggaa agagagttaa aaaaaattga tgaagccctg
      121 accctttaga ttccatttat agtctgagcc ggaatgccat cccccttgac tagagaactg
      181 tccaatccag ccgcatgtgt caagattcta ttaggcacta agtgaaatat atatgcatgc
      241 ccttatgccg tttaacactc tgggtccatc ttcaagacac tgggctgtgg atcaacccaa
      301 ccaccatcct cttccaagaa tcattttgac aggttctttt ggaggaactc cttctctttt
      361 taacccaccc ttttaaaaaa aaaaatggca ccaaagaaag acgtgaagaa acctgtggct
      421 gcggctgcgg ctgccccagc cccggcaccg gcacctgcac ctgcccctgc cccagccaaa
      481 cccaaagaag aaaaaattga cctctctgcc attaaggtaa ctaaatggat gaactgtttg
      541 gtcactgaaa catctttcaa tagtaaggat ctctaggaac ttgcaaaggc gtgtattttt
      601 cattgagagg aatagcatta tttagtgagc tggtagatta tgaagaagag aatcctgctt
      661 taaaaaatga atgccagcat ataatttcaa aaattattag agtatggtat catatgtgaa
      721 gcctgtgctt gctctatttt ttattctcaa gtttccattt tctcctaaat tgcacttata
      781 ctgtttagga gaaaagtata tatgcttaac agtgttgcat ttaagaatat ttaaaccagt
      841 gtttgggttt aaataaaatc tctctggaaa ccagatccct tacttacaaa ttacatcaaa
      901 aggaacgttt tagcccctac ttatttccag aagtttaaaa acaggg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Frankia sp. 23S rRNA gene insertion sequence.
Date: 6 Nov 92 18:28:22 GMT
Distribution: bionet
Checksum: 08196 2

LOCUS       FRA23RRNAB     91 bp ds-DNA             BCT       02-NOV-1992
DEFINITION  Frankia sp. 23S rRNA gene insertion sequence.
ACCESSION   M85113
KEYWORDS    23S ribosomal RNA; insertion.
SOURCE      Frankia sp. (strain AgB1.9) DNA.
  ORGANISM  Frankia sp.
            Prokaryotae; Firmicutes; Thallobacteria; Actinomycetes and related
            organisms; Actinomycetes with multilocular sporangia.
REFERENCE   1  (bases 1 to 91)
  AUTHORS   Roller,C., Ludwig,W. and Schleifer,K.H.
  TITLE     Gram-positive bacteria with a high DNA G+C content are
            characterized by a common insertion within their 23S rRNA genes
  JOURNAL   J. Gen. Microbiol. 138, 1167-1175 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1..91
                     /standard_name="23S rRNA insertion"
                     /note="this span absent in E. coli; located between
                     helices 54 and 55"
                     /product="23S ribosomal RNA"
BASE COUNT       15 a     20 c     30 g     26 t
ORIGIN      
        1 cgcaatgctg aatcttcctg tactaacctc ccgctgattc cctttcgggg gttgaggtgg
       61 ttgggatctt ggggggtagt aggcaagcga t
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: G.domesticus bFGF gene, exon 2
Date: 6 Nov 92 18:26:52 GMT
Distribution: bionet
Checksum: 07037 2

LOCUS       CHKBFGF       300 bp ds-DNA             VRT       02-NOV-1992
DEFINITION  G.domesticus bFGF gene, exon 2
ACCESSION   X56804
KEYWORDS    fgf gene.
SOURCE      Gallus gallus DNA.
  ORGANISM  Gallus gallus
            Eukaryota; Animalia; Chordata; Vertebrata; Aves; Neornithes;
            Neognathae; Galliformes; Phasianidae.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Mitrani,E., Gruenbaum,Y., Shohat,H. and Ziv,T.
  TITLE     Fibroplast growth factor during mesoderm induction in the early
            chick embryo
  JOURNAL   Development 109, 387-393 (1990)
  STANDARD  full automatic
COMMENT     *source: clone_library=EMBL3;
               From EMBL    entry GDBFGF;  dated 15-JUN-1992.
FEATURES             Location/Qualifiers
     misc_feature    71..173
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="bFGF"
     exon            71..173
                     /number=2
                     /note="aa 61-94"
                     /gene="bFGF"
BASE COUNT       85 a     54 c     69 g     92 t
ORIGIN      
        1 cgtatatagg agaataactt accttaccct tgccaatttc gataataact ttgtcctgtt
       61 tttcacagtc aaactgcagc ttcaagcaga agaaagagga gtagtatcaa tcaaaggcgt
      121 aagtgcaaac cgctttctgg ctatgaagga ggatggcaga ttgctggcac tggtaagcag
      181 catttcttaa tgtatctctc tgtatcttac tgctaggtcc tcttttcggt ttgtgcgttg
      241 cataggggag aaattaagct cggaaaaaac ttgtgtcaat taagagagag atttctgttg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Vibrio cholerae 16S ribosomal RNA gene.
Date: 6 Nov 92 18:36:12 GMT
Distribution: bionet
Checksum: 33167 3

LOCUS       VIBRGSL       263 bp ds-DNA             BCT       02-NOV-1992
DEFINITION  Vibrio cholerae 16S ribosomal RNA gene.
ACCESSION   L05178
KEYWORDS    16S ribosomal RNA; ribosomal RNA.
SOURCE      Vibrio cholerae (individual_isolate patient 726 from Belem, Brazil,
            1992, strain FGvc726) DNA.
  ORGANISM  Vibrio cholerae
            Prokaryotae; Facultatively anaerobic gram-negative rods;
            Vibrionaceae.
REFERENCE   1  (bases 1 to 263)
  AUTHORS   Coelho,A., Salles,C.A., Momen,H. and Vicente,A.C.
  TITLE     Sequence of a region of Vibrio cholerae 16S rDNA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   De Rijk,P., Neefs,J.-M., Van de Peer,Y. and De Wachter,R.
  TITLE     Compilation of small ribosomal subunit RNA sequences
  JOURNAL   Nucleic Acids Res. Spec. Publ. 20, 2075-2089 (1992)
  STANDARD  full automatic
REFERENCE   3  (sites)
  AUTHORS   Dorsch,M., Lane,D. and Stackebrandt,E.
  TITLE     Towards a phylogeny of the genus Vibrio based on 16S rRNA sequences
  JOURNAL   Int. J. Syst. Bacteriol. 42, 58-63 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            <1..>263
                     /product="16S ribosomal RNA"
                     /gene="16S rRNA"
                     /note="putative"
                     /citation=[1]
     stem_loop       1..263
                     /note="includes variable regions V1 and V2 of potential
                     use in the phylogeny of the genus Vibrio"
                     /note="putative"
                     /citation=[2]
                     /citation=[3]
     misc_feature    1..263
                     /note="PCR product(size 315bp) from genomic DNA,using
                     primers5'GATCATGGCTCAGATTGAACG (pos.-33 to -13)
                     and5'CCACACTGGAACTGAGACA (pos. 264 to 282).Cloned into
                     M13mp18."
                     /evidence="EXPERIMENTAL"
                     /label=PCR
BASE COUNT       66 a     59 c     90 g     48 t
ORIGIN      
        1 ctaacacatg caagtcgagc ggcagcacag aggaacttgt tccttgggtg gcgagcggcg
       61 gacgggtgag taatgcctgg gaaattgccc ggtagagggg gataaccatt ggaaacgatg
      121 gctaataccg cataacctcg caagagcaaa gcaggggacc ttcgggcctt gcgctaccgg
      181 atatgcccag gtgggattag ctagttggtg aggtaagggc tcaccaaggc gacgatccct
      241 agctggtctg agaggatgat cag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: 16S rRNA {5' region} [Spirochaeta zuelzerae, rRNA Partial, 45 nt]
Date: 5 Nov 92 23:00:46 GMT
Distribution: bionet
Checksum: 39249 2

LOCUS       S57267         45 bp    rRNA            NLM       21-OCT-1992
DEFINITION  16S rRNA {5' region} [Spirochaeta zuelzerae, rRNA Partial, 45 nt]
ACCESSION   S57267 M34265
KEYWORDS    .
SOURCE      Spirochaeta zuelzerae
  ORGANISM  Spirochaeta zuelzerae
            Unclassified.
REFERENCE   1  (bases 1 to 45)
  AUTHORS   Paster,B.J., Dewhirst,F.E., Weisburg,W.G., Tordoff,L.A.,
            Fraser,G.J., Hespell,R.B., Stanton,T.B., Zablen,L., Mandelco,L. and
            Woese,C.R.
  TITLE     Phylogenetic analysis of the spirochetes.
  JOURNAL   J. Bacteriol. 173, 6101-6109 (1991)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 57267.
            This sequence comes from table8.
FEATURES             Location/Qualifiers
     rRNA            1..45
                     /partial
                     /note="16S.  Description: 16S rRNA."
BASE COUNT       12 a      6 c     11 g     13 t      3 others
ORIGIN      
        1 nntcttgatc ccgcaaggga tttagagnat atatcatgga gagtt
//