From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: C.elegans collagen gene col-12
Date: 3 Jan 93 22:04:01 GMT
Distribution: bionet
Checksum: 37248 4

LOCUS       CELCOL12A    1003 bp ds-DNA             INV       21-DEC-1992
DEFINITION  C.elegans collagen gene col-12
ACCESSION   X51622
KEYWORDS    collagen.
SOURCE      Caenorhabditis elegans DNA.
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditida;
            Rhabditina; Rhabditoidea; Rhabditidae.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Park,Y.S. and Kramer,J.M.
  TITLE     Tandemly duplicated Caenorhabditis elegans collagen genes differ in
            their modes of splicing
  JOURNAL   J. Mol. Biol. 211, 395-406 (1990)
  STANDARD  full automatic
COMMENT     From EMBL    entry CECOL12A;  dated 04-DEC-1992.
FEATURES             Location/Qualifiers
     exon            <1..213
                     /number=1
                     /gene="col-12"
     mat_peptide     join(109..213,266..1000)
                     /product="collagen"
                     /gene="col-12"
                     /codon_start=1
     sig_peptide     1..108
                     /gene="col-12"
     intron          214..265
                     /number=1
                     /gene="col-12"
     exon            266..>1003
                     /number=2
                     /gene="col-12"
     CDS             join(1..213,266..1003)
                     /gene="col-12"
                     /product="collagen"
                     /codon_start=1
                     /translation="MTEDPKQIAQETESLRKVAFFGIAVSTIATLTAIIAVPMLYNYM
                     QHVQSSLQSEVEFCQHRSNGLWDEYKRFQGVSGVEGRIKRDAYHRSLGVSGASRKARR
                     QSYGNDAAVGGFGGSSGGSCCSCGSGAAGPAGSPGQDGAPGNDGAPGAPGNPGQDASE
                     DQTAGPDSFCFDCPAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG
                     QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGD
                     AGAPGAPGAPGQAGAPGQDGESGSEGACDHCPPPRTAPGY"
BASE COUNT      275 a    263 c    268 g    197 t
ORIGIN      
        1 atgaccgaag atccaaagca gattgcccag gagactgagt ctctccgtaa agttgcattc
       61 ttcggaattg cagtctctac aattgctact ttgactgcaa ttattgctgt tccaatgctt
      121 tacaactaca tgcagcatgt gcaatcttct cttcaatcgg aggttgaatt ctgccaacac
      181 agatcaaatg gactttggga tgagtataag agagtatgtt ttttttgttg aataatttta
      241 attttagtta aatgtttgat ttcagttcca aggagtttct ggagttgaag gacgtatcaa
      301 gagagacgca tatcaccgta gcctcggagt ttctggtgct tcccgcaagg ctcgtcgtca
      361 atcttatgga aatgacgctg ctgtcggagg attcggtgga tcatctggag gatcatgctg
      421 ctcatgcgga tctggagctg ctggaccagc tggatcacca ggacaagatg gagcaccagg
      481 aaacgatgga gctccaggag caccaggaaa cccaggacaa gatgcttctg aggatcaaac
      541 tgctggacca gacagcttct gcttcgattg cccagctgga ccaccaggac catcaggagc
      601 accaggacaa aagggaccat caggagctcc aggagcccca ggacaatctg gaggagctgc
      661 tcttccagga ccaccaggac cagctggacc accaggacca gccggacaac caggatccaa
      721 cggaaacgcc ggagctccag gagccccagg acaagtcgtc gatgttccag gaactccagg
      781 accagctgga ccaccaggat caccaggacc agccggagct ccaggacaac caggacaagc
      841 cggatcttcc caaccaggag gcccaggacc acaaggagat gccggagcac caggagcccc
      901 aggagcccca ggacaagctg gagcaccagg acaagatgga gagagtggat ccgagggagc
      961 ttgcgatcac tgcccaccac cacgtaccgc tccaggatat taa
//