From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Streptomyces aureofaciens principal sigma- like factor (hrdD) gene,
Date: 28 Jan 93 05:48:55 GMT
Distribution: bionet
Checksum: 09528 5

LOCUS       STMHRDD      1998 bp ds-DNA             BCT       27-JAN-1993
DEFINITION  Streptomyces aureofaciens principal sigma- like factor (hrdD) gene,
            complete cds.
ACCESSION   M90413
KEYWORDS    principal sigma-like factor; rpoD homologue.
SOURCE      Streptomyces aureofaciens (strain CCM 3239) DNA.
  ORGANISM  Streptomyces aureofaciens
            Prokaryotae; Firmicutes; Streptomycetaceae.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Kormanec,J., Farkasovsky,M. and Potuckova,L.
  TITLE     Four genes in Streptomyces aureofaciens containing a domain
            characteristic of principal sigma factors
  JOURNAL   Gene 122, 63-70 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_unit     169..195
                     /rpt_type=INVERTED
                     /gene="hrdD"
     RBS             645..651
                     /gene="hrdD"
     repeat_unit     859..885
                     /rpt_type=INVERTED
                     /gene="hrdD"
     repeat_unit     1660..1697
                     /rpt_type=INVERTED
                     /gene="hrdD"
     CDS             657..1634
                     /gene="hrdD"
                     /product="principal sigma-like factor"
                     /codon_start=1
                     /translation="MATRAVARRQSTSSARAVGGEIADRDLVGMYLDEIARTPLLDAA
                     KEVELSQIIEAGVYARQILDEATPREGESPAREELEALAAEGERAKEVFIRSNLRLVV
                     AVVRRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITRSIADQ
                     SRTIRLPVHLVEELGRIRRVQREFNRENGRDPEHAEIAAELDSTEKRVGDVLDWARDP
                     VSLNMSVDDEGDTQFGDLLEDTSAISPEQSVLSLLRSEELEDLLGKLDQRTASIIKMR
                     YGIEDGRERTLTEVGKQHGLTRERIRQIEKHALLELKRMARDTGFDAVA"
BASE COUNT      294 a    784 c    666 g    254 t
ORIGIN      
        1 aagtccccgg cgggccgcct cgcccacccg cgtacggaac acttcgcccc gctcttcgtc
       61 accctcggcg ccgccgaaga cgacctccac gcccagcgga ccccggtgga cggcttctgg
      121 atgggcctct cgaagcgctc cctccagttc ggctaggccc ccttcggcca ggcccccggc
      181 ggggccggtg gccggcgcgc gcgcgcggcg ctgcgggtgc ggtcgcaggg ccggtcaggg
      241 ggcgaaacat cccacttgtg acggattcgg gcattcgatc gccagtccag gcaaccgggg
      301 gccggtgcgg accgtcttca ggggtggaag tgcggccggg agcggtgccg cgtctgggtg
      361 aaaagcgccc cacggatgtg acggcggtct cacgggggcg gtggccgggc cggccggcga
      421 gggtgtgcgc gatggccttc gtctccgctc tgacctgcgc atccaccggc tcttgcgagg
      481 gttctgtcag ctccgtgtaa agagtggcgg ggcaggatac tgcaagatct cgaagaacag
      541 ggaccgactg gggaattctg tcccgattcc agtcgttgtt tccttcggaa gcgggcactc
      601 gggagagtgt ccgaggacgc accgcgaccg actcaccgca tcgcaaggga gcacgcatgg
      661 caacccgcgc cgtcgcccgt cgtcagtcca cgagcagcgc ccgcgctgtg ggcggggaga
      721 tcgccgatcg cgacctggtc ggcatgtacc tcgacgagat cgcgcgcacc ccgctgctcg
      781 acgccgccaa ggaagtggag ctctcgcaga tcatcgaggc gggcgtctac gcccggcaga
      841 tcctcgacga ggcgacgccg cgcgaggggg agtcccccgc gcgcgaggag ctggaggccc
      901 tggccgccga gggcgagcgc gccaaggagg tcttcatccg ctccaacctc cgtctggtcg
      961 tggccgtggt ccgccgctac ccgcgcagcg gcctgcccct cctcgacctc atccaggagg
     1021 gcaacgccgg cctggtgcgc gccgtcgaga agttcgacta cgccaagggc ttcaagttct
     1081 ccacgtacgc cacgtggtgg atccgccagg ccatcacccg ttccatcgcc gaccagtccc
     1141 gcaccatccg cctccccgtc cacctggtcg aggagctcgg ccggatccgc cgggtgcagc
     1201 gcgagttcaa ccgcgagaac ggccgcgacc cggagcacgc cgagatcgcc gccgaactcg
     1261 actccaccga gaagcgcgtc ggcgacgtcc tggactgggc gcgcgacccg gtcagcctca
     1321 acatgtcggt ggacgacgag ggtgacaccc agttcggcga cctcctggag gacacctcgg
     1381 cgatctcgcc cgagcagtcc gtgctctcgc tgctgcgcag cgaggagctg gaggacctcc
     1441 tcggcaagct ggaccagcgc acggcgtcca tcatcaagat gcggtacggc atcgaggacg
     1501 gccgcgagcg gaccctgacc gaggtcggca agcagcacgg cctcacccgc gagcggatcc
     1561 gccagatcga gaagcacgcg ctgctcgaac tcaagcgcat ggcccgcgac accggcttcg
     1621 acgccgtggc ctgaccggcc cgcgtccagc cccccggacg agccccggca cctaaccccc
     1681 cccaggtgcc ggggctccct cacgcccgcc ccgccccgtc cccctccggg ccgcccgtcc
     1741 ccgccgccgc ccccgccccc gccgccagcc gccccgccag cgtgcgcgcg ctgcgcacca
     1801 gggactccgg cccgcgcacc gtgaacggca cccccgtcag cgccagccgc gccgccaccc
     1861 actccggggc gtccccgctc tcgaagcaca cgcgggagcc ctccccctcc gccacggcgc
     1921 tctcgcgcag ccaccccggc agctccgcgg cggcgccgcg aaggacacct cgaccgggta
     1981 cgtctccccg ccctgcag
//