From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Cucumber green mottle mosaic virus (CGMMV) complete genome.
Date: 31 Dec 92 01:37:57 GMT
Distribution: bionet
Checksum: 39473 15

LOCUS       MCGSHCG      6421 bp ss-RNA             VRL       17-DEC-1992
DEFINITION  Cucumber green mottle mosaic virus (CGMMV) complete genome.
ACCESSION   D12505 D01188
KEYWORDS    coat protein; movement protein.
SOURCE      Cucumber green mottle mosaic virus (strain SH) cDNA to genomic RNA.
  ORGANISM  Cucumber green mottle mosaic virus
            Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses;
            Tobamovirus.
REFERENCE   1  (bases 1 to 6421)
  AUTHORS   Ugaki,M., Tomiyama,M., Kakutani,T., Hidaka,S., Kiguchi,T.,
            Nagata,R., Sato,T., Motoyoshi,F. and Nishiguchi,M.
  TITLE     The complete nucleotide sequence of cucumber green mottle mosaic
            virus (SH strain) genomic RNA
  JOURNAL   J. Gen. Virol. 72, 1487-1495 (1991)
  STANDARD  full automatic
COMMENT     Submitted (27-SEP-1991) to DDBJ by: Masashi Ugaki National
            Institute of Agrobiological Resources 2-1-2 Kannondai Tsukuba
            Ibaraki 305 Japan Phone:  0298-38-7440 Fax:    0298-38-7408.
FEATURES             Location/Qualifiers
     CDS             61..5004
                     /transl_except=(pos:3490..3492,aa:Other)
                     /note="readthrough product (premature stop codon at
                     3490-3492)"
                     /product="186K protein"
                     /codon_start=1
                     /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDR
                     RPKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYG
                     SPCYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSCGCRP
                     LPTFQIDAFRRYDSSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPAL
                     HRKNVRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLE
                     NIKLIVMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYF
                     ALNTPPIFQDKATFSVWFPEAKKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHI
                     STYDNKALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFPLVKVRKV
                     QIELMSDKVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPE
                     PFMTFSDYLEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEF
                     CKELNVNPMLIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTE
                     DMEDIVLMADKSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKVKAVL
                     PLSGICVRKPQFSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNY
                     IDYLSASLGSTLGNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVL
                     ASDDTTRIIFLSYDESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVH
                     ITLVDGVPGCGKTAEIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATNDNVRT
                     FDSFVMNRKIFKFDAVYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMN
                     FDYPKELRTLIVDNVERRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGA
                     GILRPELTKIKGKIITFTQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIG
                     LIARDSPHVLVALTRHTKAMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQL
                     MQNSLYVHRNIFLPVSKTGFYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQP
                     CRLTLSNLDPVPALIKNEAQNFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAG
                     TVDITNMSISIVDNFFSSFVRDEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANF
                     NFIDLPAFDTYMHMIKRQPKSRLDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTK
                     FLSMVDSSKFFFYTRKKPEDLQEFFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMA
                     IWEKLGLDDILAWMWSMGHKRTILQDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACV
                     ASMLPLDKCFKASFCGDDSLIYLPKGLEYPDIQATANLVWNFEAKLFRKKYGYFCGKY
                     IIHHANGCIVYPDPLKLISKLGNKSLVGYEHVEEFRISLLDVAHSLFNGAYFHLLDDA
                     IHELFPNAGGCSFVINCLCKYLSDKRLFRSLYIDVSK"
     CDS             61..3492
                     /product="129K protein"
                     /codon_start=1
                     /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDR
                     RPKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYG
                     SPCYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSCGCRP
                     LPTFQIDAFRRYDSSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPAL
                     HRKNVRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLE
                     NIKLIVMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYF
                     ALNTPPIFQDKATFSVWFPEAKKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHI
                     STYDNKALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFPLVKVRKV
                     QIELMSDKVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPE
                     PFMTFSDYLEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEF
                     CKELNVNPMLIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTE
                     DMEDIVLMADKSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKVKAVL
                     PLSGICVRKPQFSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNY
                     IDYLSASLGSTLGNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVL
                     ASDDTTRIIFLSYDESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVH
                     ITLVDGVPGCGKTAEIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATNDNVRT
                     FDSFVMNRKIFKFDAVYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMN
                     FDYPKELRTLIVDNVERRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGA
                     GILRPELTKIKGKIITFTQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIG
                     LIARDSPHVLVALTRHTKAMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK"
     CDS             4991..5785
                     /note="29K protein"
                     /product="movement protein"
                     /codon_start=1
                     /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSV
                     VKAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHS
                     VAEGTICKFSAPATVREFSVRFIPNYPVVAADALRDPWSLFVRLSNVGIKDGFHPLTL
                     EVACLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARD
                     PSYRSRSQSVGGRGKRHSKPPNRRLDSASEESSSVSFEDGLQSDHT"
     CDS             5760..6245
                     /note="17.3K protein"
                     /product="coat protein"
                     /codon_start=1
                     /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDS
                     FRESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSN
                     PTTAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSK
                     A"
BASE COUNT     1653 a   1244 c   1522 g   2002 t
ORIGIN      
        1 gttttaattt ttataattaa acaaacaaca acaacaacaa caaacaattt taaaacaaca
       61 atggcaaaca ttaatgaaca aatcaacaac caacgtgacg ccgcggctag cgggagaaac
      121 aatctcgtta gccaattggc gtcaaaaagg gtgtatgacg aggctgttcg ctcgttggat
      181 catcaagaca gacgcccgaa aatgaatttt tctcgtgtgg tcagcacaga gcacaccagg
      241 cttgtaactg acgcgtatcc ggagttttcg attagcttta ccgccaccaa gaactctgta
      301 cactcccttg cgggtggtct gaggcttctt gaattggaat atatgatgat gcaggtgccc
      361 tacggctcac cttgttatga catcggcggt aactatacgc agcacttgtt caaaggtaga
      421 tcatatgtgc attgctgcaa tccgtgccta gatcttaagg atgttgcgag gaatgtgatg
      481 tacaacgata tgattacgca acatgtacag aggcacaagg gatcttgcgg gtgcagacct
      541 cttccaactt tccagataga tgcattcagg aggtacgata gttctccctg tgcggtcacc
      601 tgttcagacg ttttccaaga gtgttcctat gattttggga gtggtaggga taatcatgca
      661 gtctcgttgc attcaatcta cgatatccct tattcttcga tcggacctgc tcttcatagg
      721 aagaatgtgc gagtttgtta tgcagccttt catttctcgg aggcattgct tttaggttcg
      781 cctgtaggta atttaaatag tattggggct cagtttaggg tcgatggtga tgatgtgcat
      841 tttcttttta gtgaagagtc tactttgcat tatactcata gtttagaaaa tatcaagtta
      901 atcgtgatgc gtacttactt tcctgctgat gataggtttg tatatattaa ggagttcatg
      961 gttaagcgtg tggatacttt tttctttagg ttggtcagag cagatacaca catgcttcat
     1021 aaatctgtgg ggcactattc gaaatcgaag tctgagtact tcgcgctgaa tacccctccg
     1081 atcttccaag ataaagccac gttttctgtg tggtttcctg aagcgaagaa ggtgttgata
     1141 cccaagtttg aactttcgag attcctttct gggaatgtga aaatctctag gatgcttgtc
     1201 gatgctgatt tcgtccatac cattattaat cacattagca cgtatgataa caaggcctta
     1261 gtgtggaaga atgttcagtc ctttgtggaa tccatacgtt caagagtaat tgtaaacgga
     1321 gtttccgtga aatctgagtg gaacgtaccg gttgatcagc tcactgatat ctcgttctcg
     1381 atattccctc tcgtgaaggt taggaaggta cagatcgagt taatgtctga taaagttgta
     1441 atcgaggcga ggggtttgct tcggaggttc gcagacagtc ttaaatctgc cgtagaagga
     1501 ctaggtgatt gcgtctatga tgctctagtt caaaccggct ggtttgacac ctctagcgac
     1561 gaactgaaag tattgctacc tgaaccgttt atgacctttt cggattatct tgaagggatg
     1621 tacgaggcag atgcaaagat cgagagagag agtgtctctg agttgctcgc ttccggtgat
     1681 gatttgttca agaaaatcga tgagataaga aacaattaca gtggagtcga atttgatgta
     1741 gagaaattcc aagaattttg caaggaactg aatgttaatc ctatgctaat tggccatgtc
     1801 atcgaagcta ttttttcgca gaaggctggg gtaacagtaa cgggtctggg cacgctctct
     1861 cctgagatgg gcgcttctgt tgcgttatcc agtacctctg tagatacatg tgaagatatg
     1921 gatgtaactg aagatatgga ggatatagtg ttgatggcgg acaagagtca ttcttacatg
     1981 tcccctgaaa tggcgagatg ggctgatgtt aaatatggca acaataaagg ggctctagtc
     2041 gagtacaaag tcggaacctc gatgacttta cctgccacct gggcagagaa agttaaggct
     2101 gtcttaccgt tgtcggggat ctgtgtgagg aaaccccaat tttcgaagcc gcttgatgag
     2161 gaagatgact tgaggttatc aaacatgaat ttctttaagg tgagcgatct aaagttgaag
     2221 aagactatca ctccagtcgt ttacactggg accattcgag agaggcaaat gaagaattat
     2281 attgattact tatcggcctc tcttggttcc acgctgggta atctggagag aatcgtgcgg
     2341 agtgattgga atggtactga ggagagtatg caaacgttcg ggttgtatga ctgcgaaaag
     2401 tgcaagtggt tattgttgcc agccgagaag aagcacgcat gggccgtggt tctggcaagt
     2461 gacgatacca ctcgcataat cttcctttca tatgacgaat ctggttctcc tataattgat
     2521 aagaaaaact ggaagcgatt tgctgtctgt tccgagacca aagtctatag tgtaattcgt
     2581 agcttagagg ttctaaataa ggaagcaata gtcgaccccg gggttcacat aacattagtt
     2641 gacggagtgc cgggttgtgg aaagaccgcc gagattatag cgagggtcaa ttggaaaact
     2701 gatctagtat tgactcccgg aagggaggca gctgctatga ttaggcggag agcctgcgcc
     2761 ctgcacaagt cacctgtggc aaccaatgac aacgtcagaa ctttcgattc ttttgtgatg
     2821 aataggaaaa tcttcaagtt tgacgctgtc tatgttgacg agggtctgat ggtccatacg
     2881 ggattactta attttgcgtt aaagatctca ggttgtaaaa aagccttcgt ctttggtgat
     2941 gctaagcaaa tcccgtttat aaacagagtc atgaatttcg attatcctaa ggagttaaga
     3001 actttaatag tcgataatgt agagcgtagg tatgtcaccc ataggtgtcc tagagatgtc
     3061 actagttttc ttaatactat ctataaagcc gctgtcgcta ctactagtcc ggttgtacat
     3121 tctgtgaagg caattaaagt gtcaggggcc ggtattctga ggcctgagtt gacaaagatc
     3181 aaaggaaaga taataacgtt tactcaatct gataagcagt ccttgatcaa gagtgggtac
     3241 aatgatgtga atactgtgca tgaaattcag ggagaaacct ttgaggagac ggcagttgtg
     3301 cgtgccaccc cgactccaat aggtttgatt gcccgtgatt caccacatgt actagtggcc
     3361 ttaactaggc acactaaggc aatggtgtat tatactgttg tattcgatgc agttacaagt
     3421 ataatagcgg atgtggaaaa ggtcgatcag tcgatcttga ccatgtttgc taccactgtg
     3481 cctaccaaat agcaattaat gcagaattcg ctgtatgtcc atcgtaatat tttcctccct
     3541 gttagtaaaa cggggtttta tacagacatg caggagttct acgatagatg ccttcctggg
     3601 aattccttcg tactaaatga tttcgatgcc gtaaccatgc ggttgaggga caacgaattt
     3661 aacttacaac cttgtaggct aaccttgagt aatttagatc cggtacccgc tttgattaag
     3721 aatgaagcgc agaattttct gatccccgtt ttgcgtacgg cctgtgaaag gccgcgcatt
     3781 ccgggtcttc ttgagaatct tgtagctatg ataaagagga atatgaatac tcctgattta
     3841 gctgggaccg tagatataac taacatgtcg atttctatag tagataactt cttttcttct
     3901 tttgttaggg acgaggtttt gcttgatcac ttagattgtg ttagggctag ttccattcaa
     3961 agtttttctg attggttttc gtgtcaacca acctcagcgg ttggccagtt agctaatttc
     4021 aatttcatag atttgcctgc ctttgatact tatatgcata tgattaagag gcaacccaag
     4081 agtcggttag atacttcgat tcagtctgaa tatccggcct tgcaaactat tgtttatcac
     4141 cctaaagtgg taaatgcagt ttttggtccg gttttcaagt atttaaccac caagtttctt
     4201 agtatggtag atagttctaa gtttttcttt tacactagga aaaaaccaga agatctgcag
     4261 gaatttttct cagatctctc ttcccattct gattatgaga ttcttgagct tgatgtttct
     4321 aaatatgaca agtcgcaatc cgatttccac ttctctattg agatggcaat ttgggaaaaa
     4381 ttagggcttg acgatatttt ggcttggatg tggtctatgg gtcacaaaag aactatactg
     4441 caagatttcc aagccgggat aaagacgctc atttactatc aacggaagtc tggtgatgta
     4501 actactttta taggtaatac ctttattatc gcagcgtgtg tggctagtat gttgccgtta
     4561 gataagtgtt ttaaagctag tttttgtggt gatgattcgc tgatctacct tcctaagggt
     4621 ttggagtatc ctgatataca ggctactgcc aaccttgttt ggaattttga ggcgaaactt
     4681 ttccgaaaga agtatggtta cttctgcggg aagtatataa ttcaccatgc caacggctgt
     4741 attgtttacc ctgacccttt aaaattaatt agtaaattag gtaataagag tcttgtaggg
     4801 tatgagcatg ttgaggagtt tcgtatatct ctcctcgacg ttgctcatag tttgtttaat
     4861 ggtgcttatt tccatttact cgacgatgca atccacgaat tatttcctaa tgctgggggt
     4921 tgcagttttg taattaattg tttgtgtaag tatttgagtg ataagcgcct tttccgtagt
     4981 ctttacatag atgtctctaa gtaaggtgtc agtcgagaac tcgttgaaac ctgagaagtt
     5041 tgtcaaaatc tcttgggtcg ataagttgct ccctaactat ttttccattc ttaagtattt
     5101 atctataact gactttagtg tagttaaagc tcagagctat gaatccctcg tgcctgtcaa
     5161 gttgttgcgt ggtgttgatc ttacaaaaca cctttatgtc acattgttgg gcgttgtggt
     5221 ttctggtgta tggaacgtac cggaatcctg taggggtggt gctactgttg ctctggttga
     5281 cacaaggatg cattctgttg cagagggaac tatatgcaaa ttttcagctc ccgccaccgt
     5341 ccgcgaattc tctgttaggt tcatacctaa ttatcctgtc gtggctgcgg atgcccttcg
     5401 cgatccttgg tctttatttg tgagactctc taatgtgggt attaaagatg gtttccatcc
     5461 tttgacttta gaggtcgctt gtttagtcgc tacaactaac tctattatca aaaagggtct
     5521 tagagcttct gtagtcgagt ctgtcgtctc ttccgatcag tctattgtcc tagattcctt
     5581 atccgagaaa gttgaacctt tctttgacaa agttcctatt tcagcggctg taatggcaag
     5641 agatcccagt tataggtcta ggtcgcagtc tgtcggtggt cgtggtaagc ggcattctaa
     5701 acctccaaat cggaggttgg actctgcttc tgaagagtcc agttctgttt cttttgaaga
     5761 tggcttacaa tccgatcaca cctagcaaac ttattgcgtt tagtgcttct tatgttcccg
     5821 tcaggacttt acttaatttt ctagttgctt cacaaggtac cgctttccag actcaagcgg
     5881 gaagagattc tttccgcgag tccctgtctg cgttaccctc gtctgtcgta gatattaatt
     5941 ctagattccc agatgcgggt ttttacgctt tcctcaacgg tcctgtgttg aggcctatct
     6001 tcgtttcgct tctcagctcc acggatacgc gtaatagggt cattgaggtt gtagatccta
     6061 gcaatcctac gactgctgag tcgcttaacg ctgtaaagcg tactgatgac gcgtctacag
     6121 ccgctagggc cgagatagat aatttaatag agtctatttc taagggtttt gatgtttacg
     6181 atagggcttc atttgaagcc gcgttttcgg tagtctggtc agaggctacc acctcgaaag
     6241 cttagtttcg agggtcttct gatggtggtg cacaccaaag tgcatagtgc tttcccgttc
     6301 acttaaatcg aacggtttgc tcattggttt gcggaaacct ctcacgtgtg acgttgaagt
     6361 ttctatgggc agtaattctg caaggggttc gaatcccccc ttttccccgg gtaggggccc
     6421 a
//