From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Eubacterium sp. (clones OSVL-7, OSVL-32, OSVL-43) 16S ribosomal
Date: 6 Nov 92 18:27:59 GMT
Distribution: bionet
Checksum: 36376 4

LOCUS       EUBRRDB      1010 bp ss-rRNA            RNA       02-NOV-1992
DEFINITION  Eubacterium sp. (clones OSVL-7, OSVL-32, OSVL-43) 16S ribosomal
            RNA, partial sequence.
ACCESSION   L04704
KEYWORDS    16S ribosomal RNA.
SOURCE      Eubacterium sp. (strain Octopus Spring:OS-7) (library: Octopus
            Spring V-Long) cDNA to rRNA.
  ORGANISM  Eubacterium sp.
            Prokaryotae; Eubacteria.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ward,D.M., Bateson,M.M., Weller,R. and Ruff-Roberts,A.L.
  TITLE     Ribosomal RNA analysis of microorganisms as they occur in nature
  JOURNAL   Adv. Microb. Ecol. 12, 219-286 (1992)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Ward,D.M., Kopczynski,E.D., Heimbuch,B.K., Bateson,M.M. and
            Weller,R.
  TITLE     Uncultivated cyanobacteria, Chloroflexus-like and Spirochete-like
            inhabitants of a hot spring microbial mat
  JOURNAL   Appl. Environ. Microbiol. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            <1..>1010
                     /note="aligns with Escherichia coli 16S rRNA from base
                     pair 232 to 1267"
                     /note="putative"
                     /citation=[2]
                     /citation=[1]
     unsure          replace(187..189,"ct")
                     /note="base may or may not be present"
                     /citation=[2]
                     /citation=[1]
     unsure          replace(241..298,"")
                     /note="unsequenced region; n and s base pairs added to
                     maintain allignment with known 16S rRNA sequences"
                     /citation=[2]
                     /citation=[1]
BASE COUNT      223 a    220 c    315 g    176 t     76 others
ORIGIN      
        1 gcttgcggnc gattagctag ttggtggggt aatagcttac caaggcgacg atcggtagcc
       61 ggcctgagag ggtggtcggc cacactggga ctgggacacg gcccagactc ctacgggagg
      121 cagcagttaa gaatcttgcg caatgggcgg aagcctgacg cagcgacgcc gcgtgcctga
      181 ggaaggcctt cgggttgtaa agggcactag acagggacga aggaagtgac ggtacctgtt
      241 gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnttg
      301 ctcggaatca ctgggcgtaa agggtgcgta ggcgggtatg taagtctgtt gtgaaatacc
      361 gcagcttaac tgcggtgctg cgacggaaac tgcatatctg gagtcccgga gaggcagacg
      421 gaattcccgg tgtagcggtg aaatgcgcag atatcgggag gaacaccgat ggcgaaggca
      481 gtctgctgga cggagactga cgctgaggca cgaaagcgtg gggagcaaac aggattagat
      541 accctggtag tccacgccct aaacgttgtc gactaggcgt tggtaggtga gagcctatcg
      601 gtgccgaagc aaacgcgata agtcgaccgc ctggggacta cgctcgcaag agtgaaactc
      661 aaaggaattg acnggggccc gcacaagcgt ggagcatgtg gtttaattcg atgatacgcg
      721 aagaacctta cccgggcttg acatgcacac gaatggggtg gagacacctc agccgtaacg
      781 tgtgcacagg tgctgcatgg ttgtcgtcag ctcgtgttgt gagatgttgg gttaagtccc
      841 gcaacgagcg caacccttac tgtgtgttgc cagcaggtng anctgggcac tcacacggaa
      901 ctgccgrcga caagtmnnan nnnnnnnggg atgacgtcaa atcatcatgg cccttatgtc
      961 cgggnctaca cacgtgctac aatggccggt acaganngag gckaacctgc
//