From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: N=nucleocapsid protein [Lyssavirus sp.=viral hemorrhagic septicemia
Date: 5 Nov 92 23:03:57 GMT
Distribution: bionet
Checksum: 49179 4

LOCUS       S109221      1361 bp    RNA             NLM       23-OCT-1992
DEFINITION  N=nucleocapsid protein [Lyssavirus sp.=viral hemorrhagic septicemia
            virus VHSV, Genomic RNA, 1361 nt]
ACCESSION   S40507 X59241
KEYWORDS    .
SOURCE      viral hemorrhagic septicemia virus VHSV
  ORGANISM  Lyssavirus sp.
            Unclassified.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Bernard,J., Bremont,M. and Winton,J.
  TITLE     Nucleocapsid gene sequence of a North American isolate of viral
            haemorrhagic septicaemia virus, a fish rhabdovirus.
  JOURNAL   J. Gen. Virol. 73 ( Pt 4), 1011-1014 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 109221.
            This sequence comes from Fig. 1.
FEATURES             Location/Qualifiers
     CDS             87..1301
                     /note="Description: nucleocapsid protein;  For the protein
                     sequence (NCBI gibbsq 109222):  This sequence comes from
                     Fig. 2."
                     /gene="N"
                     /codon_start=1
                     /translation="MEGGIRAAFSGLNDVRIDPTGGEGRVLVPGEVELIVYAGPFGTD
                     DGKVIVDALAALGGPQTVQALSVLLSYVLQGSAQGDLEAKCKILTDMGFKVTQSPRAT
                     GIEAGILMPMRELAQTVNNDNLMDIVKGALMTCSLLDKYSVDKMIKYITKKLGELGST
                     QGVGELQHLSADKAAIRKLAGCVRPGQKITKALYAFILTEIADPTTQSRVQSMGALRL
                     NGTGMTMIGLFTQAANNLGIPPAKLLEDLCMESLVESARRIIQLMRQVSEARSIQERY
                     AIMMSRMLGESYYKSYRLNDNSKISYILSQISGKYAVDSLEGLEGIKVTEKFREFTEL
                     VAEVLVDKYERIGEDSTEVSDVIREAARQHARKASDKPEPKARNFRSSTGRGKEQEKE
                     ESDDDDYPGDSD"
BASE COUNT      372 a    334 c    395 g    260 t
ORIGIN      
        1 aggttgaaat tccaagaatt tggaaagtga aagttgaaca cagagtcata tcttagaatc
       61 gttgaacaaa agaactcagt tgaaaaatgg aagggggaat ccgtgcagct ttttcaggcc
      121 tgaacgatgt caggatcgac cccactggag gagagggacg ggtgcttgtc cctggtgaag
      181 tggaactcat cgtgtatgct ggtccctttg gtacagatga tgggaaggtg atcgtggatg
      241 cacttgccgc acttggagga ccccagactg tgcaagcact gtccgtactt ctctcctatg
      301 tactccaagg aagtgcacaa ggagatctgg aggcaaagtg caagatcctc actgacatgg
      361 gcttcaaggt gacacagtca ccccgggcaa ctggtatcga ggccggaatc cttatgccga
      421 tgagggaact ggcccagact gtcaacaacg acaacctcat ggacatcgtc aagggggccc
      481 tgatgacgtg ttcccttctt gacaagtact cggtggacaa gatgatcaag tacatcacca
      541 agaagcttgg ggagctgggc agcacacagg gggttggaga actgcagcac ttatccgccg
      601 acaaagcagc catcagaaag ctcgcaggat gtgtgcgtcc tggacagaag atcaccaagg
      661 ccctctacgc cttcatcctg actgagatcg cggaccccac cacccagtca agggtccaga
      721 gcatgggggc gttgaggctc aatgggacag gaatgaccat gatcggactg ttcacccaag
      781 ccgccaacaa cctgggcatt ccgccggcga agctgctgga ggatctgtgc atggaatctc
      841 ttgttgagtc agccaggcgg atcatccagc tgatgaggca ggtgtcggag gcgcggtcca
      901 tccaagagcg atacgccatc atgatgagtc ggatgctggg agagtcctac tacaagtcgt
      961 atcgactcaa tgacaactcc aagatctcct acattctgtc tcagatcagt gggaagtacg
     1021 cagtggactc cttggagggc ctggagggga tcaaggtgac agagaagttc cgcgaattca
     1081 ccgaacttgt tgctgaggtc ctggtggaca agtatgagag gattggagag gacagcacag
     1141 aggtctcaga tgtcatcaga gaggcagcca gacagcatgc acgcaaggca tcagacaagc
     1201 cagagcccaa agcccgcaac ttcaggagct ccaccggaag ggggaaggag caggagaagg
     1261 aggagtccga cgatgacgac tacccagggg actctgatta aacactggct gttccacaca
     1321 acaagcctct ccgtctcata actcatatag atagaaaaaa a
//