From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Pseudorabies virus (PRV) 28K protein gene, complete cds.
Date: 29 Jul 92 10:03:50 GMT
Distribution: bionet
Checksum: 40741     5

LOCUS       SH128K       1725 bp ds-DNA             VRL       29-JUL-1992
DEFINITION  Pseudorabies virus (PRV) 28K protein gene, complete cds.
ACCESSION   D10452 D01117
KEYWORDS    28K protein; unique short region.
SOURCE      Pseudorabies virus (strain NIA-3) (library: pN3HB) DNA.
  ORGANISM  Suid herpesvirus 1
            Viridae; ds-DNA enveloped viruses; Herpesviridae;
            Alphaherpesvirinae.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   van Zijl,M., van der Gulden,H., de Wind,N., Gielkens,A. and
            Berns,A.
  TITLE     Identification of two genes in the unique short region of
            pseudorabies virus; comparison with herpes simplex virus and
            varicella-zoster virus
  JOURNAL   J. Gen. Virol. 71, 1747-1755 (1990)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     misc_feature    <1..1127
                     /note="unique short region (Us) of PRV genome"
     CDS             <1..9
                     /product="11K protein"
                     /codon_start=1
                     /translation="HV"
     misc_feature    146..149
                     /note="transcriptional start site"
     CDS             232..1002
                     /product="28K protein"
                     /codon_start=1
                     /translation="MGVTAITVVTLMDGSGRIPAFVGEAHPDLWKVLTEWCYASLVQQ
                     RRAADEDTPRQHVVLRSSEIAPGSLALLPRATRPVVRTRSDPTAPFYITTETHELTRR
                     PPADGSKPGEPLRISPPPRLDTEWSSVINGIQYLNSGARGTAPIHLWILGAADLCDQV
                     LLAASRSTAAGAPGAPTGARLTRRRPGLTDADALDVIVAGIPATRAMFARVHNRSWRH
                     AGEWTEALHAQIVTRGDVRRRRGGRGNGRERAPRCTIS"
     polyA_signal    1049..1054
     repeat_region   1128..>1725
                     /rpt_type=inverted
                     /note="terminal repeat"
     repeat_region   1454..1607
                     /rpt_type=direct
                     /rpt_unit=1454..1479
                     /rpt_unit=1480..1505
                     /rpt_unit=1506..1531
                     /rpt_unit=1532..1557
                     /rpt_unit=1558..1583
                     /rpt_unit=1584..1607
BASE COUNT      216 a    813 c    456 g    240 t
ORIGIN
        1 cacgtgtagc gagcgagcga acgggagcgg ggcccgcccc catccgccgc gcccaggaga
       61 ggggggagag agcggggggt tgagcgcgcc acgtggttgt gggctcggac ttgtcacaat
      121 aaatgggccc cggcgcgccc gggcgcacac agcagccttc ctcgtctccg cgtctctgct
      181 gttcctctcg tcggtcttct cccactccgc cgtcgcgaac gcgctcgcgc catgggggtg
      241 acggccatca ccgtggtcac gctgatggac gggtccgggc gcatccccgc cttcgtgggc
      301 gaggcgcacc cggacctgtg gaaggtgctc accgagtggt gctacgcgtc gctggtgcag
      361 cagcggcgcg ccgccgacga ggacacgccg cggcaacacg tggtgctgcg ctcctcggag
      421 atcgcccccg gctcgctggc cctgctgccg cgcgccacgc gccccgtcgt gcggacacgg
      481 tccgacccca cggcgccgtt ctacatcacc accgagacgc acgagctgac gcggcgcccc
      541 ccggcggacg gctcgaagcc cggggagccc ctccgtatca gcccgccccc gcggctggac
      601 acggagtggt cctccgtcat caacgggatc cagtacctga actcgggggc ccggggcacg
      661 gccccgatcc acctgtggat cctgggcgcc gccgacctct gcgaccaggt gctcctggcc
      721 gcctcccgca gcaccgccgc cggagccccc ggcgccccga cgggcgcgcg cctgacccgg
      781 cggcggcccg ggctgacgga cgccgacgcc ctggacgtga tcgtcgccgg gatcccggcc
      841 acccgcgcca tgttcgcgcg ggtccacaac cgctcctggc gccacgccgg cgagtggacg
      901 gaggccctgc atgcccagat cgtgacccgg ggcgacgtgc gccggcgccg gggcgggcgc
      961 ggcaacggac gcgagcgcgc cccgcgatgt accatctcct agacggcagg atctctccgc
     1021 atcccccact ccccccaaaa aaacaaacaa taaacgctct cgctctggca cccgatgaca
     1081 cgcctccgtt ctctctctcc ctcccccatc ccccccatcc cccccgcgcg ccgccgcccc
     1141 acgcgcgcca cgtcctccct ccccgcggcc gcccgccccc cccccttggc gccatccgac
     1201 agactcgcgc cgccgccacc cactcgctct cccccatttc cccccccctt cccccccgct
     1261 gccctgacgt cactccccct tcccaccaat agccgccgag gacctcaccc cccactcctt
     1321 gcaccatctc ctagccgccg aggactcccc cggactcccc ccaccaacaa ctttaacaat
     1381 aaacgccctc gctctcgaac ccgacgcgcc cggcctctgt cctttctccc cctctcccgt
     1441 cccactcccc tctcccctct cccccaccgt ccccccgtcc ccctctcccc caccgtcccc
     1501 ccgtccccct ctcccccacc gtccccccgt ccccctctcc cccaccgtcc ccccgtcccc
     1561 ctctccccca ccgtcccccc gtccccctct cccccaccgt ccccccgcgg ggggggggtt
     1621 ccgtcccatc cccccgtctc actcccctct ccctccaccc cgtctcatcc cccgtctcat
     1681 ccccccatct cccttcccca cgagggccgg gagggaaaaa acgcc
//