HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rice DNA, partial sequence of RFLP marker.
Date: 22 Jan 93 19:48:31 GMT
Distribution: bionet
Checksum: 39072 2

LOCUS       RIC024GN2     216 bp ds-DNA             PLN       22-JAN-1993
DEFINITION  Rice DNA, partial sequence of RFLP marker.
ACCESSION   D13612
KEYWORDS    RFLP marker; STS sequence;
            restriction fragment length polymorphism; sequence tagged site.
SEGMENT     2 of 2
SOURCE      Oryza sativa (strain Nipponbare, sub_species Japonica) DNA, clone
            GN24.
  ORGANISM  Oryza sativa
            Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
            Commelinidae; Cyperales; Poaceae.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   Minobe,Y.
  TITLE     Nucleotide sequence of sequence tagged site from rice RFLP marker
            probe
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     Submitted (09-NOV-1992) to DDBJ by: Yuzo Minobe Rice Genome
            Research Program National Institute of Agrobiological Resources
            2-1-2 Kannondai Tsukuba, Ibaraki 305 Japan Phone:  0298-38-7441
            Fax:    0298-38-7468.
FEATURES             Location/Qualifiers
     misc_feature    1..216
                     /note="STS (sequence tagged site); laboratory sequence
                     name: GN24B"
BASE COUNT       45 a     54 c     54 g     63 t
ORIGIN      Chromosome 11.
        1 aattgtggag tcactcccta tcagcacacg cctggacgac aatctgactg tgccactcgc
       61 ctctgtcctc gttggtgtcc ttgttttcta ttatactggg gccagaaacc tgtgttgtat
      121 gagcgctgac agcagtgaca tttctgcact tgtgcagaat cagatggtct tggacaggtt
      181 ctagtgacta ctgactagta agtagctgcc ctgcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Influenza virus HA gene for hemagglutinin, partial cds.
Date: 22 Jan 93 19:47:08 GMT
Distribution: bionet
Checksum: 01198 2

LOCUS       FLAHA15       329 bp ss-RNA             VRL       22-JAN-1993
DEFINITION  Influenza virus HA gene for hemagglutinin, partial cds.
ACCESSION   D13584
KEYWORDS    hemagglutinin.
SOURCE      Influenza virus A/Suita/1/90 (H3N2), cDNA to mRNA
  ORGANISM  Influenza virus type A
            Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses;
            Orthomyxoviridae; Influenzavirus; Influenza A viruses.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Okuno,Y., Isegawa,Y., Sasao,F. and Ueda,S.
  TITLE     A common neutralizing epitope conserved between H1 and H2
            hemagglutinin of influenza A virus
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     Submitted (07-NOV-1992) to DDBJ by: Yoshinobu Okuno Department of
            Preventive Medicine Research Institute for Microbial Diseases Osaka
            University 3-1 Yamadaoka, Suita Osaka 565 Japan Phone:  06-877-5121
            x3127 Fax:    06-875-1170.
FEATURES             Location/Qualifiers
     misc_feature    1..329
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="HA"
     CDS             1..329
                     /partial
                     /product="Hemagglutinin"
                     /gene="HA"
                     /codon_start=1
BASE COUNT      124 a     63 c     81 g     61 t
ORIGIN      gene segment 4.
        1 atgacaaacc ctttcaaaat gtaaacagga tcacatatgg ggcatgtccc agatatgtta
       61 agcaaaacac tctgaaattg gcaacaggga tgcggaatgt accagaaaaa caaactaggg
      121 gcatattcgg cgcaatcgca ggtttcatag aaaatggttg ggagggaatg gtagacggtt
      181 ggtacggttt caggcatcaa aactctgagg gcacaggaca agcagcagat cttaaaagca
      241 ctcaagcagc aatcgaccaa atcaacggga aactgaatag gttaatcgag aagacgaacg
      301 agaaattcca tcaaaccgaa aaggaattc
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mouse short ear skeletal morphogenesis (Bmp5) gene.
Date: 29 Jan 93 05:45:55 GMT
Distribution: bionet
Checksum: 49568 2

LOCUS       MUSBMP5X      246 bp ds-DNA             ROD       28-JAN-1993
DEFINITION  Mouse short ear skeletal morphogenesis (Bmp5) gene.
ACCESSION   L02240
KEYWORDS    morphogenesis.
SOURCE      Mus musculus (strain C57BL/6J, sub_species domesticus) bone DNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 246)
  AUTHORS   Kingsley,D.M., Bland,A.E., Grubber,J.M., Marker,P.C., Russell,L.B.,
            Copeland,N.G. and Jenkins,N.A.
  TITLE     The mouse short ear skeletal morphogenesis locus is associated with
            defects in a bone morphogenetic member of the TGF-B superfamily
  JOURNAL   Cell 71, 399-410 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    20..246
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="Bmp5"
     5'UTR           20..246
                     /gene="Bmp5"
                     /note="homology to 5' end of human BMP5 cDNA clone"
BASE COUNT       79 a     41 c     61 g     65 t
ORIGIN      
        1 agatctctct tgaagagggc tggtatattt gtgcctgctg gaggtggaat taactgtaag
       61 aaggggggaa gagattgaat ggatttacag ggaggattgc aagtaaattc agggaaacac
      121 atttacttga acactataac cttgggtctt gttttacact aagaccatac aaaagatgtt
      181 caagttatca ctaggctgcc ggacaaatct aattccaaca ccaaggtgca gatcagacgt
      241 agatct
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human Fc-gamma receptor I family gene product mRNA sequence.
Date: 26 Jan 93 05:47:58 GMT
Distribution: bionet
Checksum: 20992 2

LOCUS       HUMFCGR1BB    570 bp ss-mRNA            PRI       25-JAN-1993
DEFINITION  Human Fc-gamma receptor I family gene product mRNA sequence.
ACCESSION   L03420
KEYWORDS    Fc-gamma receptor; Fc-gamma receptor I; IgG Fc receptor I;
            antigen receptor.
SOURCE      Homo sapiens blood cDNA to mRNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Porges,A.J., Redecha,P.B., Doebele,R., Pan,L.C., Salmon,J.E. and
            Kimberly,R.P.
  TITLE     Novel Fc gamma receptor I family gene products in human mononuclear
            cells
  JOURNAL   J. Clin. Invest. 90, 2102-2109 (1992)
  STANDARD  full automatic
BASE COUNT      172 a    119 c    140 g    139 t
ORIGIN      
        1 atgtggttct tgacaactct gctcctttgg ggctggctac tactgcaggt ctccagcaga
       61 gtcttcatgg aaggagaacc tctggccttg aggtgtcatg cgtggaagga taagctggtg
      121 tacaatgtgc tttactatcg aaatggcaaa gcctttaagt tcttccactg gaattctaac
      181 ctcgccattc tgaaaaccaa cataagtcac aatggcacct accattgctc aggcatggga
      241 aagcatcgct acacatcagc aggaatatca caatacactg tgaaaggcct ccagttacca
      301 actcctgtct ggtttcatgt ccttttctat ctggcagtgg gaataatgtt tttagtgaac
      361 actgttctct gggtgacaat acgtaaagaa ctgaaaagaa agaaaaagtg gaatttagaa
      421 atctctttgg attctggtca tgagaagaag gtaatttcca gccttcaaga agacagacat
      481 ttagaagaag agctgaaatg tcaggaacaa aaagaagaac agctgcagga aggggtgcac
      541 cggaaggagc cccagggggc cacgtagcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Puccinia coronata forma specialis calamagrostis 5.8S ribosomal RNA
Date: 26 Jan 93 05:49:19 GMT
Distribution: bionet
Checksum: 60799 3

LOCUS       PPORGBHAC     425 bp ds-DNA             PLN       25-JAN-1993
DEFINITION  Puccinia coronata forma specialis calamagrostis 5.8S ribosomal RNA
            gene, complete rRNA; 25S ribosomal RNA gene, 5' end rRNA.
ACCESSION   L08695
KEYWORDS    25S ribosomal RNA; 5.8S ribosomal RNA; internal transcribed spacer.
SOURCE      Puccinia coronata (individual_isolate 91WI9526) heterokaryon,
            uredinia DNA.
  ORGANISM  Puccinia coronata
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Urediniomycetes;
            Uredinales; Pucciniaceae.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Zambino,P.J. and Szabo,L.J.
  TITLE     Phylogenetic relationships of selected cereal and grass rusts based
            on rDNA sequence analysis
  JOURNAL   Mycologia (1993) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_RNA        <1..41
                     /citation=[1]
                     /note="internal transcribed spacer 1 of nuclear ribosomal
                     gene; putative"
     rRNA            42..197
                     /product="5.8S ribosomal RNA"
                     /citation=[1]
                     /note="putative"
     misc_RNA        198..408
                     /citation=[1]
                     /note="internal transcribed spacer 2 of nuclear ribosomal
                     gene; putative"
     variation       replace(397..398,"a")
                     /citation=[1]
                     /note="isolate 91WI9526 has heterogeneity among among
                     ribosomal gene repeats for a vs. at"
     rRNA            409..>425
                     /product="25S ribosomal RNA"
                     /citation=[1]
                     /note="putative"
BASE COUNT      145 a     77 c     65 g    135 t      3 others
ORIGIN      
        1 acacaagttt aaatgaatgt aaacccccct ttaaattaaa ataactttta acaatggatc
       61 tctaggctct cacatcgatg aagaacacag tgaaatgtga taagtaatgt gaattgcaga
      121 attcagtgaa tcatcgaatc tttgaacgca ccttgcgcct tttggtattc caaaaggcac
      181 acctgtttga gtgtcatgaa accccctcac aaaataactt tattgttata ctttgtggat
      241 gttgagtgtt gctataatat ayatagctca ctttaaattc ataagtcaca ctctttaagt
      301 aaagttggat tgacttggtg taataattta atcatcacat caaggaaagt agcaatactt
      361 gccatctttt tacagaagag agacttctaa acacccatat wwtatttttt aagacctcaa
      421 atcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Puccinia coronata forma specialis festucae 5.8S ribosomal RNA gene,
Date: 26 Jan 93 05:49:16 GMT
Distribution: bionet
Checksum: 14814 3

LOCUS       PPORGBHAA     426 bp ds-DNA             PLN       25-JAN-1993
DEFINITION  Puccinia coronata forma specialis festucae 5.8S ribosomal RNA gene,
            complete rRNA; 25S ribosomal RNA gene, 5' end rRNA.
ACCESSION   L08693
KEYWORDS    25S ribosomal RNA; 5.8S ribosomal RNA; internal transcribed spacer.
SOURCE      Puccinia coronata (individual_isolate 91MN9523) heterokaryon,
            uredinia DNA.
  ORGANISM  Puccinia coronata
            Eukaryota; Fungi; Eumycota; Basidiomycotina; Urediniomycetes;
            Uredinales; Pucciniaceae.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Zambino,P.J. and Szabo,L.J.
  TITLE     Phylogenetic relationships of selected cereal and grass rusts based
            on rDNA sequence analysis
  JOURNAL   Mycologia (1993) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_RNA        <1..41
                     /citation=[1]
                     /note="internal transcribed spacer 1 of nuclear ribosomal
                     gene; putative"
     rRNA            42..197
                     /product="5.8S ribosomal RNA"
                     /citation=[1]
                     /note="putative"
     misc_RNA        198..409
                     /citation=[1]
                     /note="internal transcribed spacer 2 of nuclear ribosomal
                     gene; putative"
     rRNA            410..>426
                     /product="25S ribosomal RNA"
                     /citation=[1]
                     /note="putative"
BASE COUNT      141 a     78 c     68 g    139 t
ORIGIN      
        1 acacaagttt aaatgaatgt aaaaccccct ttaaattaaa ataactttta acaatggatc
       61 tctaggctct cacatcgatg aagaacacag tgaaatgtga taagtaatgt gaattgcaga
      121 attcagtgaa tcatcgaatc tttgaacgca ccttgcgcct tttggtattc caaaaggcac
      181 acctgtttga gtgtcatgaa accctctcac aaaacaactt tattgttgct ttttttgtgg
      241 atgttgagtg ttgctatata tttatagctc actttaaata tataagtcac acttttcaag
      301 taagttggat tgacttggtg taataatttt atcatcacat caaggaaagt agcaatactt
      361 gccatctttt gaaaggaggg actcctaaaa aacccctcat aacctttttt taagacctca
      421 aatcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Macs=myristoylated alanine-rich C-kinase substrate protein
Date: 27 Jan 93 05:57:40 GMT
Distribution: bionet
Checksum: 64271 2

LOCUS       S118652       613 bp    DNA             ROD       15-JAN-1993
DEFINITION  Macs=myristoylated alanine-rich C-kinase substrate protein
            {promoter} [mice, Genomic, 613 nt]
ACCESSION   S49713
KEYWORDS    .
SOURCE      mice
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Blackshear,P.J., Tuttle,J.S., Oakey,R.J., Seldin,M.F., Chery,M.,
            Philippe,C. and Stumpo,D.J.
  TITLE     Chromosomal mapping of the human (MACS) and mouse (Macs) genes
            encoding the MARCKS protein.
  JOURNAL   Genomics 14, 168-174 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 118652] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2.  Map location: 10.
FEATURES             Location/Qualifiers
     misc_feature    1..613
                     /partial
                     /note="This feature applies to a gene which lacks a coding
                     region feature. Description: myristoylated alanine-rich
                     C-kinase substrate protein"
                     /gene="Macs"
BASE COUNT      168 a    153 c    148 g    144 t
ORIGIN      
        1 gagctcgagg atcttcgtgg tttaaatacc tttcagtgtg ggacgattta acaattgcag
       61 cagttttttt aaaaaaagaa acaccccccc ccaaaaaaaa aaatccttgc gcactatctg
      121 tgaaaccctt atggagtgcg gagggaaaaa atgctgctag cacacaaatc ctacccattg
      181 tctttaacac tcgtatacac acttatacac gtaaacacac gggaaagatg ggggagggga
      241 gagaatggct agagacagac gcggatatag accggcaaga gtcaatgcga gtcaagttaa
      301 agctttctcc gcccccatcc ataagtaccc cctcccgcgt taattaattc caaacaaagc
      361 aagccaatca agacatgcat tattattttc aggccgaggg agacgagaag cacgtatttt
      421 ttaattgatt tatttatttg gaagacatta attcttggtc tgaggctgat tttcaaaccg
      481 tttgcaaagc gcggctccat tgttcgcccg gagcgcaggc cccgccccct gctttgtgtg
      541 cggcgcgcgg attggccagc gcgcgcgggg gcgcgtcagc gcccgcgagc ccattcatct
      601 gtgcacttgg gcg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: glycine-rich protein {clone atGRP-1} [Arabidopsis thaliana, C24,
Date: 27 Jan 93 05:54:55 GMT
Distribution: bionet
Checksum: 29889 3

LOCUS       S117605       740 bp    mRNA            PLN       22-JAN-1993
DEFINITION  glycine-rich protein {clone atGRP-1} [Arabidopsis thaliana, C24,
            mRNA Partial, 740 nt]
ACCESSION   S47405
KEYWORDS    .
SOURCE      Arabidopsis thaliana C24
  ORGANISM  Arabidopsis thaliana
            Unclassified.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   de Oliveira,D.E., Seurinck,J., Inze,D., Van Montagu,M. and
            Botterman,J.
  TITLE     Differential expression of five Arabidopsis genes encoding
            glycine-rich proteins.
  JOURNAL   Plant Cell 2, 427-436 (1990)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 117605] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 3A.
FEATURES             Location/Qualifiers
     CDS             1..634
                     /partial
                     /note="atGRP;  For the protein sequence (NCBI gibbsq
                     117606):  Method: conceptual translation supplied by
                     author.  This sequence comes from Fig. 3A."
                     /product="glycine-rich protein"
                     /codon_start=2
                     /translation="GAGAGGGFGGGAGGGHGGGAGAGGGLGGGAGGGFGGGAGGGGGA
                     GGGFGGGAGGGHGGGAGGGFGGGAGGGGGHGGGAGGGFGGGVGGGGGHGGGAGGGFGG
                     GAGGGGGHGGGAGGGFGGGAGGGGGQGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGA
                     GGGGGHGGGAGGGAGGGFGGGAGGGGGHGGGAGGGFGGGAGGGGGHGGRF"
BASE COUNT      125 a     79 c    374 g    162 t
ORIGIN      
        1 aggagctggt gctggtggag ggtttggcgg tggtgctgga ggaggtcacg gtggtggcgc
       61 cggcgctgga ggaggattag gcggtggtgc tggaggagga tttggcggtg gtgctggagg
      121 aggtggcggt gcaggaggag gatttggcgg tggtgctggt ggaggccacg gtggaggtgc
      181 tggtggagga tttggtggtg gtgcaggagg tggaggaggt cacggtggag gtgctggtgg
      241 aggatttggc ggtggtgtag gaggtggagg aggccacggt ggaggtgccg ggggaggatt
      301 tggcggtggt gcaggaggtg gaggaggcca cggtggaggt gccgggggag gatttggcgg
      361 tggtgcagga ggtggaggag gccaaggtgg aggtgctggg ggaggttttg gcggtggtgc
      421 cggtggggga tttggcggtg gtgcaggagg aggtgctggt ggaggatttg gcggtggtgc
      481 aggaggtgga ggaggccatg gtggtggtgc cggtggtgga gctggagggg gctttggcgg
      541 tggtgcagga ggtggaggag gccatggtgg tggagctggt ggaggttttg gcggcggtgc
      601 aggaggagga ggaggccatg gtggtcgttt ttaaatatag ctttataggg taacttgctt
      661 gtgtctcaag ccagattaaa aaggaagata tttgctggag aatcttatta tgaatggaat
      721 aaatgatatt taggaaaaaa
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: class 1 outer membrane protein= subtype-specific epitope [Neisseria
Date: 27 Jan 93 06:00:11 GMT
Distribution: bionet
Checksum: 40851 2

LOCUS       S119614        24 bp    DNA             BCT       13-JAN-1993
DEFINITION  class 1 outer membrane protein= subtype-specific epitope [Neisseria
            meningitidis, NIBSC 2214, Genomic, 24 nt]
ACCESSION   S49480
KEYWORDS    .
SOURCE      Neisseria meningitidis NIBSC 2214
  ORGANISM  Neisseria meningitidis
            Unclassified.
REFERENCE   1  (bases 1 to 24)
  AUTHORS   Maiden,M.C., Bygraves,J.A., McCarvil,J. and Feavers,I.M.
  TITLE     Identification of meningococcal serosubtypes by polymerase chain
            reaction.
  JOURNAL   J. Clin. Microbiol. 30, 2835-2841 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 119614] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Table 5.  The authors begin their
            numbering at 34.
FEATURES             Location/Qualifiers
     CDS             1..24
                     /partial
                     /note="subtype-specific epitope;  For the protein sequence
                     (NCBI gibbsq 119616):  Method: conceptual translation
                     supplied by author.  This sequence comes from Table 5."
                     /product="class 1 outer membrane protein"
                     /codon_start=1
                     /translation="PLPNIQPQ"
BASE COUNT        7 a     10 c      2 g      5 t
ORIGIN      
        1 ccgctcccaa atattcaacc tcag
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human MHC HLA DPB1 gene, exon 2, clone DPB new F.
Date: 28 Jan 93 05:47:03 GMT
Distribution: bionet
Checksum: 23749 2

LOCUS       HUMMHDPBU     285 bp ds-DNA             PRI       27-JAN-1993
DEFINITION  Human MHC HLA DPB1 gene, exon 2, clone DPB new F.
ACCESSION   M83917
KEYWORDS    lymphocyte antigen; major histocompatibility complex.
SOURCE      Homo sapiens (individual_isolate PEI 0003) DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   Kimura,A.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     intron          <1..19
                     /number=1
     intron          284..>285
                     /number=2
     CDS             <20..>283
                     /label=exon 2
                     /product="MHC HLA DPB1"
                     /codon_start=3
                     /translation="NYLFQGRQECYAFNGTQRFLERYIYNREEFARFDSDVGEFRAVT
                     ELGRPAAEYWNSQKDLLEEKRALPDRMCRHNYELDEAVTLQRR"
BASE COUNT       61 a     79 c    101 g     44 t
ORIGIN      
        1 gtccgccccc tccccgcaga gaattacctt ttccagggac ggcaggaatg ctacgcgttt
       61 aatgggacac agcgcttcct ggagagatac atctacaacc gggaggagtt cgcgcgcttc
      121 gacagcgacg tgggggagtt ccgggcggtg acggagctgg ggcggcctgc tgcggagtac
      181 tggaacagcc agaaggacct cctggaggag aagcgggcat tgccggacag gatgtgcaga
      241 cacaactacg agctggacga ggccgtgacc ctgcagcgcc gaggt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227
Date: 26 Jan 93 05:53:15 GMT
Distribution: bionet
Checksum: 14637 3

LOCUS       SIV227BF20    363 bp ss-RNA             VRL       25-JAN-1993
DEFINITION  Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227
            clone BF20) gp120 (V1, V2) RNA, partial cds's.
ACCESSION   M92712
KEYWORDS    .
SOURCE      Simian immunodeficiency virus 15 months post infection Blood cDNA
            to genomic RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Almond,N.M., Jenkins,A.R., Slade,A., Heath,A.B., Cranage,M. and
            Kitchin,P.A.
  TITLE     Population sequence analysis of a simian immunodeficiency virus
            (32H re-isolate of SIVmac251): A virus stock used for international
            vaccine studies
  JOURNAL   AIDS Res. Hum. Retroviruses 8, 77-88 (1992)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Almond,N.M., Jenkins,A.R., Heath,A.B., Taffs,F. and Kitchin,P.A.
  TITLE     The genetic evolution of the envelope gene of simian
            immunodeficiency virus in cynomolgus macaques infected with a
            complex virus pool
  JOURNAL   Virology 191, 996-1002 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..133
                     /gene="V1"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CNKSETDKWGLTKSLTTTAPTAPTAASEKIDMVNETSSCIAQNN
                     "
     CDS             133..361
                     /gene="V2"
                     /partial
                     /product="gp120"
                     /codon_start=1
                     /translation="CTGLEQEQMISCKFKMTGLKRDKTKEYNETWYSTDLVCEQGNST
                     DNESRCYMNHCNTSVIQESCDKHYWDTIRFRY"
BASE COUNT      145 a     55 c     76 g     87 t
ORIGIN      
        1 tgcaataaaa gtgagacaga taaatgggga ttgacaaaat cattaacaac aacagcacca
       61 acagcaccaa cggcagcatc agaaaaaata gacatggtca atgagactag ttcttgtata
      121 gctcagaata attgcacagg cttggaacaa gagcaaatga taagctgtaa attcaaaatg
      181 acagggttaa aaagagacaa gacaaaggag tacaatgaaa cttggtactc tacagatttg
      241 gtttgtgaac aagggaatag cactgataat gaaagtagat gctacatgaa tcactgtaac
      301 acttctgtta tccaagagtc ttgtgacaaa cattattggg atactattag atttaggtat
      361 tgt
//