From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Tomato ringspot virus (TomRSV) genome RNA2, complete sequence.
Date: 21 Jul 92 10:08:50 GMT
Distribution: bionet
Checksum: 28396    11

LOCUS       TOSRNA2      7273 bp ss-RNA             VRL       21-JUL-1992
DEFINITION  Tomato ringspot virus (TomRSV) genome RNA2, complete sequence.
ACCESSION   D12477 D01129
KEYWORDS    RNA2; RNA2 polyprotein; coat protein; transport protein.
SOURCE      Tomato ringspot virus from raspberry cDNA to genomic RNA, clones
            K6, J56 and O35.
  ORGANISM  Tomato ringspot virus
            Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses;
            Nepovirus.
REFERENCE   1  (bases 1 to 7273)
  AUTHORS   Rott,M.E., Tremaine,J.H. and Rochon,D.M.
  TITLE     Nucleotide sequence of tomato ringspot virus RNA-2
  JOURNAL   J. Gen. Virol. 72, 1505-1514 (1991)
  STANDARD  unannotated staff_entry
COMMENT     Submitted (08-Jul-1991) on tape to DDBJ by:
            D'Ann M. Rochon
            Agriculture Canada Research Station
            6660 N. W. Marine Dr
            Vancouver, B.C., V6T 1X2
            Canada
            Phone:  604-224-4355
            Fax:    604-666-4994
            E-mail: USERVIRC@UBCMTSG.BITNET
BASE COUNT     1641 a   1694 c   1810 g   2126 t      2 others
ORIGIN      RNA-2, map units 1-7273 (nucleotide number).
        1 nnagcgaaaa atctggtgat attccaactt ctctcaattc acacttccat tgtgtcgttt
       61 tgttttcttt tcttttgatg tcctccattt gtttcgccgg tggcaaccac gccaggttgc
      121 catcgaaggc tgcttactat cgggctattt ccgataggga gctggaccgc gagggtcgct
      181 tcccttgcgg gtgtctagca cagtatactg tgcaagcccc ccctcctgcc aagacacagg
      241 agaaagccgt aggcaggtcc gctgacctcc aaaagggtaa tgttgctccc cttaagaagc
      301 aacgctgcga tgttgtggtc gcagtctctg gacctcctcc tttggagttg gtctaccctg
      361 cccgggtagg gcaacatagg ttggaccaac cttcaaaagg tcccttggca gtcccctctg
      421 ccaagcaaac ctccactgca atggaggttg ttctttctgc tgaggaggcg gctatcaccg
      481 ccccctggct tcttcgcccc tgcaagggcg aagccccccc cccccccccc cttacacaga
      541 ggcagcaatt tgctgcccta aagaagaggc tggccgtcaa gggccagcaa atcattcgcg
      601 agcacattcg tgctcgcaag gcggccaaat atgccgccat cgccaaagcc aaaaaggctg
      661 cggctcttgc tgccgttaag gcagcgcagg aggctcctcg cctcgcggcc caaaaggccg
      721 ccatcagcaa gatccttcgg gatcgagatg ttgctgctct cccccctccc ccccctcctt
      781 ctgctgccag attggcagcc gaggccgaat tggcctcaaa ggccgagtct ctccggaggc
      841 tcaaagcctt taaaactttt agcagggtac gccctgcttt aaacacttct tttcctcccc
      901 ctcccccacc ccctccggct cggtcttccg agcttttggc agcttttgag gctgccatga
      961 acaggtctca gcctgttcaa gggggcttct ccctccctac ccgcaagggt gtttatgtcg
     1021 ctcccaccgt tcagggtgtg gtgcgcgctg ggcttcgtgc ccagaagggc tttttgaatg
     1081 ccgtctccac cggcattgtg gctggagctc gcattttaaa gagcaaaagc caaaattggt
     1141 ttaggaggag catgggcatt gcccatgatt atgttgaagg atgcatggcc agcactgttt
     1201 taggttgtgc tgggcctgtt gtgcaacgac aggaagcttg cagcgttgtt gctgcacctc
     1261 ctatagtgga gcccgttttg tgggttcccc cattgagcga gtacgctaac gattttccta
     1321 agcttacttg ctctactttt actgaatggc aaagaccgcg caagcaatct attgccattt
     1381 ctaacctttt ccgcaagctc attgatcgtg ctttgcttgt gagtggcgtt agcttgattg
     1441 cgagcgtcct cctatttgag attgcggaaa attttgccgt gcgacaggcg gtttgcccag
     1501 tggaaatgcc gtcttgcgca acctctgttt cggagaaatc cttagtctca ttggatgaag
     1561 ggaattttta tctccgtaaa tatttatcac cacctcccta tccttttggt agggaaagtt
     1621 tctattttca agctaggccc cgttttattg ggcctatgcc ttctatggtt agggctgtac
     1681 cacaaattgt acaacagcct accatgacgg aggaactcga atttgaagtt ccttcctcat
     1741 ggtcttctcc tttgcctctg ttcgcgaatt ttaaagtgaa taggggcgca tgttttttgc
     1801 aagtcctgcc tcaaagggtt gttttacccg atgaatgcat ggatttgctt tctctttttg
     1861 aggatcaatt gccggaaggg cctttgcctt cctttagttg gtcttcacct ttacctctat
     1921 tcgcgaattt taaagtgaat aggggtgcat gttttttgca agtcctgcct caaagggttg
     1981 ttttacctga tgaatgcatg gatttgcttt ctctttttga ggatcaattg ccggaagggc
     2041 ctttaccttc ctttagttgg tcttcacctt tacctctatt cgcgagtttt aaagtgaata
     2101 ggggtgcatg ctttttgcag gttttgcctg cgcgcaaggt cgtctctgat gagttcatgg
     2161 acgtcttgcc ctttttgttc tctccactgg tatcgcacca ggaagaggaa ccagaaatgg
     2221 ttcctgctgt gttggaagca gcagattcag ttggtgatat caccgaagcc ttctttgatg
     2281 acttggaatg tgagtctttc tatgactcat attctgatga agaagaagct gagtgggctg
     2341 aagtgccaag gtgtaagact atgtctgaac tttgcgcttc tcttactctt gccggtgacg
     2401 ccgaggggct acgtaagtct cacggggttt ttttaaaacg ccttgtgact taccttcagt
     2461 ccttcgaaga gccactttac tcttcacgcg ccttttatag cgtgaaggtg aagccagttt
     2521 atcgtcccaa aaaatttgag ggacatatcg attgtacctg cctcgatggc aatatgggcg
     2581 agtgggaatg gcgcgaaagc gtcgacgcta tgtggcgttg cccagggcgc ttgctcaata
     2641 caaagcgcac attcactcgc gatgattggg agcgtgtgca atatttacgc ataggcttca
     2701 atgagggtag ataccgccga aattggcgcg ttttaaacct tgaggagatg gatctctctt
     2761 tgcatgaata tccagagatt tcgtctgccc cagtacagtc ctctcttttt tcgagggttg
     2821 tcgatagggg agccaccttg gcaagtagta tcccctttgt tactcgctct aactgccagt
     2881 cttctctagg aactcctggt ttaaatgtac atactataca ccaggaagcc cctactacat
     2941 tgcgagctcc accttttaca ggagcgcgca atgtaatggg atcctctgat gcgggtgcaa
     3001 atgctgctcc gtaccgctca gaagcgcgca agcgctggct gagtcgtaaa caagaggatt
     3061 cccaagaaga taacattaag aggtatgccg ataagcacgg catttccttt gaagaggcta
     3121 gagctgtcta caaggcccca aaggaaggag tgcctaccca gcgctccatt ctgcctgatg
     3181 ttagagatgc ttattctgcc cgttctgctg gcgctcgggt tcggtccctc ttcggaggat
     3241 cccctaccac gcgcgcacag aggacggaag attttgtgtt aacgagcccg tctgcggggg
     3301 atgcaagctc gtttagtttt tattttaatc ccgtttctga gcaagagatg gctgagcaag
     3361 agcgtggtgg taatactatg ctgtctcttg atgcggttga ggtcgttatc gacccagttg
     3421 gcatgcctgg tgatgacact gatttgactg ttatggtctt gtggtgtcaa aattcagatg
     3481 atcagcgcgc tctgatcggg gccatgtcta cttttgtggg caatggcctg gccagagccg
     3541 ttttctatcc cgggcttaaa ttattatatg ccaattgtag agtgcgagat ggccgagttt
     3601 taaaggtcat tgtgagcagc acaaattcaa cgctcacgca tggtttgccc caggctcaag
     3661 tctccattgg gactttgcgc cagcatttgg ggccaggtca tgatcgcact atctctggtg
     3721 ccctgtatgc ttcccaacaa cagggtttca atatacgcgc cacggaacaa ggtggtgctg
     3781 taacatttgc cccccaaggg ggccatgttg agggtatccc cagcgccaat gtacagatgg
     3841 gcgctgggga gcatttaatt caagcgggtc ccatgcagtg gcgcttgcag aggtcgcaat
     3901 cttctcgatt tgtggtctct ggtcattcgc gaacgcgtgg aagctctttg tttactggaa
     3961 gtgtcgatag gacgcagcag ggaacggggg cttttgaaga cccgggtttt ttaccaccca
     4021 ggaattcttc tgttcagggc gggtcctggc aagaaggtac tgaagccgct tatttaggca
     4081 aagttacctg tgcgaaggac gccaagggtg gaactttatt gcacactttg gatattataa
     4141 aagagtgcaa atcccaaaat ttattaaggt ataaagaatg gcaacgtcaa ggctttcttc
     4201 atggaaagct tagattgcgc tgctttatac ccactaacat tttttgtggg cattccatga
     4261 tgtgttcctt ggacgcgttt ggtcgttatg attcgaacgt gctaggtgct agttttccag
     4321 tgaagttggc aagtttattg ccaacggagg tgattagtct ggctgatggg cccgtggtca
     4381 cgtggacgtt tgatattggg cgtctgtgtg gtcatggtct ctattattcc gagggcgctt
     4441 atgcgaggcc caaaatttat tttttagttc tttccgataa tgatgttcct gcagaagcag
     4501 attggcaatt tacctatcag cttttgttcg aggatcatac attttcgaat tcctttgggg
     4561 cggttccttt tattacctta ccccatattt ttaatagatt agatataggt tattggcgcg
     4621 ggccaacaga gatagattta acatcaactc ccgcaccaaa cgcctatcgt ttacttttcg
     4681 gcttgtccac tgtcattagt ggtaacatgt cgactttgaa tgccaatcaa gccttattgc
     4741 gttttttcca gggctcgaat ggcactttac atgggcgcat taaaaagata gggacagcac
     4801 ttacaacctg ttccctttta ttatcgttgc gccacaaaga tgcgagtctc acattggaga
     4861 ccgcatatca aaggccccat tacattttgg ctgacggaca aggggctttt tcattaccaa
     4921 tttctacccc ccatgcagca acctcctttt tagaggacat gttgcgcctg gagatttttg
     4981 ctattgctgg gccttttagt cccaaagata ataaagcaaa ataccaattc atgtgttatt
     5041 tcgatcacat agaattggtt gagggggtac ctagaactat agcaggcgaa cagcagttca
     5101 actggtgcag ttttagaaat ttcaaaatcg atgactggaa gtttgagtgg ccggctcgcc
     5161 ttccagatat acttgatgat aagtcagaag tgctcttaag gcaacatcct ttatctctgc
     5221 ttatctcatc taccggtttt tttacgggta gagccatttt tgttttccag tggggtttga
     5281 atactactgc tgggaatatg aaaggttcat tttctgcgcg cctggccttt ggcaagggcg
     5341 ttgaggaaat tgagcaaacg tcaacagtgc aaccacttgt tggcgcttgt gaagcccgca
     5401 tacccgtgga gtttaagact tacacgggtt atactacttc gggtcctcct ggatctatgg
     5461 aaccatacat ttacgtgagg cttacgcaag ctaagcttgt ggataggctt tctgtgaatg
     5521 ttattttaca ggagggattt tctttctatg gacctagtgt caaacatttt aagaaagaag
     5581 tcggcacgcc tagtgccacc ctagggacaa ataatcccgt tgggcgccca cctgagaacg
     5641 tcgatacagg gggtcctggc ggccagtatg cagctgcctt acaagcagcc cagcaagctg
     5701 gaaaaaatcc tttcgggcgt ggctaagttg gcttcctgaa aggcgagtag ctgccgttag
     5761 cagcttccaa aaggtggcct cttaattagc ttttaatagg ggttatccag ccttaagcaa
     5821 gctggcaccg gtcctgatgg actaccagga aagcacctgg tttggaagaa ttcgagtaaa
     5881 attcttaaat cttgtttact cgtgacttat agtacattca agaggaatga ctcatgtttt
     5941 gtttatttac atgatggcat aaagagttaa cggctcatat ggtgctcatt acgttcaagt
     6001 gttgaaggat ccaatagcct tgaactgtgg tgccatgtga ggaaatccac gttatctctg
     6061 attgtcaaaa tagactagtc taggagacga taaatcctat gtgggtgagt cccactctgg
     6121 cgagacacgc agtgcctttt atttgtttga ggttatcaaa catcatatct tgagtctgca
     6181 tttaaattcg aataatgtag ttgtcatagc ctaccgatga gtctgcgaga aaggttccat
     6241 gaggacttgg gttggctaac ccccacttaa tctcttcata gatcattcga cagtgtgtcg
     6301 agaaactatg ggttttgaca ccttaaggga agcgagagtt ctcgtatgga tatcactcta
     6361 atcatggtac ttaccatgcc atgtttagag taaatcatcg cctcgacggt gtgatacttt
     6421 ccttaagttt tagtcaaacg atagtctcgt tgatcgtatg tgaagcgtgg agcgagttcg
     6481 aaacgaactg attaccagag gtaggacgct attgttccag gcgtttctta tgggcataag
     6541 ctgtaaactt ggtttcgcaa gccatgcagc acctcccgtt acttgtgtac tttctagggg
     6601 ctcccggcct tccttccggt acaataccta gtgaagcaag taattgcgtt gagggataag
     6661 agtagcatgt tcctacttaa ggaaggaata tgtcgtgttt tccacacgtt agtgttgcaa
     6721 tgctgtaatg gcactgcagt gcaggaatgg ttcccagcca ctttttctgg gattctaatc
     6781 gtacgtcaca attgtgtgtg tatcgttgac ggaggagtag cgatcctcta ccacgcgagt
     6841 ctggaagtga ttaccagggc ctaagatggc cagcacacgg tacgattaaa tttagctgta
     6901 atgtagtggt atgttaagtt gagactaact tacccgtacg agttaaactc taagatggat
     6961 gtgtgttctg ccatcttaga ggaagtagat gtgtttttac caatctgaga cgagccgtta
     7021 attcggtgct ttaatacgtc aatgataata ctcgtgcagt tgcagctgca cgagtatgtt
     7081 ggtacacaca gtctactcgg atacggtcga gttaccctca caatagggat tactctctca
     7141 atcttaacta ctgcaaggac gttgttttcg cagggttttg ttggtccgtt tgtgtttcaa
     7201 aacgctgctt tgcaattttc ttttttgttt tattgctttc gtagtgtcga actttgtcca
     7261 agttcataaa agc
//