From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (YU-2) RNA.
Date: 20 Aug 92 10:01:41 GMT
Distribution: bionet
Checksum: 07420    14

LOCUS       HIVYU2X      9706 bp ss-RNA             VRL       20-AUG-1992
DEFINITION  Human immunodeficiency virus type 1 (YU-2) RNA.
ACCESSION   M93258
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 (individual_isolate YU) brain
            RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 9706)
  AUTHORS   Li,Y., Kappes,J.C., Conway,J.A., Price,R.W., Shaw,G.M. and
            Hahn,B.H.
  TITLE     Molecular characterization of HIV-1 cloned directly from uncultured
            human brain: Identification or replication competent and defective
            viral genomes
  JOURNAL   J. Virol. 65, 3973-3985 (1991)
  STANDARD  simple staff_entry
REFERENCE   2  (bases 1 to 9706)
  AUTHORS   Li,Y., Hui,H., Burgess,C.J., Price,R.W., Sharp,P.M., Hahn,B.H. and
            Shaw,G.M.
  TITLE     Complete nucleotide sequence, genome organization, and biological
            properties of HIV-1 in vivo: Evidence for limited defectiveness and
            complementation
  JOURNAL   J. Virol. (1992) In press
  STANDARD  simple staff_entry
BASE COUNT     3427 a   1759 c   2362 g   2158 t
ORIGIN
        1 tggaagggct aattcactcc caacaaagac aagatatcct tgatctgtgg gtctaccaca
       61 cacaaggcta cttccctgat tggcagaact acacaccagg ggggactaga tggccactga
      121 cctttggatg gtgcttcaag ctagtaccag ttgagccaga gaagatagaa gaggccaatg
      181 caggagagaa caactgcttg ttacacccta tgagccagca tggaatggat gacccggaga
      241 gagaagggtt agagtggagg tttgacagcc gcctagcatt tcatcacgtg gcccgagagc
      301 tgcatccgga gtactacaag aactgatgac ctcgagcttt ctacaaggga ctttccgctg
      361 gggactttcc agggaagcgt ggcctgggcg ggactgggga gtggcgagcc ctcagatgct
      421 gcatataagc agctgctttt gcctgtactg ggtctctctg gttagaccag atctgagcct
      481 gggagctctc tggctagcta ggaaacccac tgcttaagcc tcaataaagc ttgccttgag
      541 tgctttaagt agtgtgtgcc cgtctgttgt gtgactctgg taactagaga tccctcagac
      601 ccttttagtc agtgtggaaa atctctagca gtggcgcccg aacagggact tgaaagcgaa
      661 aggaaaacca gaggagctct ctcgacgcag gactcggctt gctgaagcgc gcacggcaag
      721 aggcgagggg cggcgactgg tgagtacgcc aaaaaatttt tgactagcgg aggctagaag
      781 gagagagatg ggtgcgagag cgtcagtatt aagtgcgggg gaattagata agtgggaaaa
      841 aattcggtta aggccagggg gaaagaaaca atatagatta aaacatatag tatgggcaag
      901 cagggagcta gaacgattcg cagttgatcc tggcctgtta gaaacatcag aaggctgtag
      961 acaaatactg ggacagctac aaccgtccct tcagacagga tcagaagagc ttagatcatt
     1021 atataataca gtagccaccc tctattgtgt acatcaaaag atagaggtaa aagacaccaa
     1081 ggaagcttta gagaagatag aggaagagca aaacaaaagt aagaaaaaag cacagcaagc
     1141 agcagctgac acaggaaaca gcagccaggt cagccaaaat taccctatag tgcagaacct
     1201 acaggggcaa atggtacatc aggccatatc acctagaact ttaaatgcat gggtaaaagt
     1261 agtggaagag aaggcgttca gcccagaagt aatacccatg ttttcagcat tatcagaagg
     1321 agccacccca caagatttaa acaccatgct aaacacagtg gggggacacc aagcagccat
     1381 gcaaatgtta aaagagacca tcaatgagga agctgcagaa tgggatagat tgcatccagt
     1441 gcatgcaggg cctattgcac caggccagat gagagaacca aggggaagtg acatagcagg
     1501 aactactagt acccttcagg aacaaatagg atggatgaca aataatccac ctatcccagt
     1561 aggagaaatc tataaaagat ggataatcct gggattaaat aaaatagtaa gaatgtatag
     1621 tcctaccagc attctggaca taagacaagg accaaaggaa ccctttagag attatgtaga
     1681 ccggttctat aaaactctaa gagccgagca agcttcacag gaggtaaaaa attggatgac
     1741 agaaaccttg ttggtccaaa atgcgaaccc agattgtaag actattttaa aagcattggg
     1801 accagcagct acactagaag aaatgatgac agcatgtcag ggagtggggg gacccggcca
     1861 taaagcaaga gttttggctg aagcaatgag ccaagtaaca aattcagcta ccataatgat
     1921 gcagagaggc aattttagga accaaagaaa aactgttaag tgtttcaatt gtggcaaaga
     1981 agggcacata gccaaaaatt gcagggctcc taggaaaaag ggctgttgga aatgtggaaa
     2041 ggaaggacac caaatgaaag attgtactga gagacaggct aattttttag ggaagatctg
     2101 gccttcccac aagggaaggc caggaaattt tcttcagagc agaccagagc caacagcccc
     2161 atcagaagag agcgtcaggt ttggagaaga gacaacaact ccctctcaga agcaggagcc
     2221 gatagacaag gaactgtatc ctttagcttc cctcagatca ctctttggca gcgacccctc
     2281 gtcacaataa agataggggg gcaactaaag gaagctctat tagatacagg agcagatgat
     2341 acagtattag aagaaatgaa tttgccagga agatggaaac caaaaatgat agggggaatt
     2401 ggaggtttta tcaaagtaag acagtatgat cagataccca tagaaatatg tggacataaa
     2461 gctataggta cagtattagt aggacctaca cctgtcaaca taattggaag aaatctgttg
     2521 actcagattg gttgcacttt aaattttccc attagtccta ttgaaactgt accagtaaaa
     2581 ttaaagccag gaatggatgg cccaaaagtt aaacaatggc cattgacaga agaaaaaata
     2641 aaagcattag tagaaatttg tacagaaatg gaaaaggaag ggaaaatttc aaaaattggg
     2701 cctgaaaacc catacaatac tccagtattt gccataaaga aaaaagacag tactaaatgg
     2761 agaaaattag tagatttcag agaacttaat aagagaactc aagacttctg ggaagttcaa
     2821 ttaggaatac cacatcccgc agggttaaaa aagaaaaaat cagtaacagt actggatgtg
     2881 ggtgatgcat atttttcagt tcccttacat gaagacttca ggaagtatac tgcatttacc
     2941 atacctagta taaacaatga gacaccaggg actagatatc agtacaatgt gcttccacag
     3001 ggatggaaag ggtcaccagc aatattccaa agtagcatga caacaatctt agagcctttt
     3061 agaaaacaaa atccagacct agttatctat cagtacatgg atgatttgta cgtaggatct
     3121 gacttagaaa tagggcagca tagaacaaaa atagaggaac tgagacaaca tctgttgagg
     3181 tggggattta ccacaccaga caaaaaacat cagaaagaac ctccattcct ttggatgggt
     3241 tatgaactcc atcctgataa atggacagta cagcctatag tgctgccaga aaaagatagc
     3301 tggactgtca atgacataca gaagttagtg ggaaaattga attgggcaag tcagatttat
     3361 gcagggatta aagtaaggca attatgtaaa ctccttaggg gaaccaaagc actaacagaa
     3421 gtaataccac taacagaaga agcagaacta gaactggcag aaaacaggga aattctaaaa
     3481 gaaccagtac atggagtgta ttatgaccca tcaaaagact tgatagcaga aatacagaag
     3541 caggggcaag gccaatggac atatcaaatt tatcaagagc catttaaaaa tctgaaaaca
     3601 ggaaaatatg caagaacgag gggtgcccac actaatgatg taaaacaatt aacagaggca
     3661 gtacaaaaaa tagccacaga aagcatagta atatggggaa agactcctaa atttaaacta
     3721 cccatacaaa aagaaacatg ggaaacatgg tggacagaat attggcaagc cacctggatt
     3781 cctgagtggg agtttgtcaa tacccctccc ttagtgaaat tatggtacca gttagagaaa
     3841 gaacccataa taggagcaga aactttctat gtagatgggg cagctaacag ggagactaaa
     3901 ttaggaaaag caggatatgt tactaacaag ggaagacaaa aggttgtctc cctaactgac
     3961 acaacaaatc agaagactga gttacaagca atttatctag ctttgcagga ttcgggatta
     4021 gaagtaaaca tagtaacaga ctcacaatat gcattaggaa tcattcaagc acaaccagat
     4081 agaagtgaat cagagttagt cagtcaaata atagagcagt taataaaaaa ggaaaaggtc
     4141 tatctggcat gggtaccagc acacaaagga attggaggaa atgaacaagt agataaatta
     4201 gtcagtgctg ggatcaggaa agtactattt ttagatggaa tagataaggc ccaagaagaa
     4261 catgagaaat atcacagtaa ttggagagca atggctagtg attttaacct gccacctgta
     4321 gtagcaaaag aaatagtagc cagctgtgat aaatgtcagc taaaaggaga agccatgcat
     4381 gggcaagtag actgtagtcc aggaatatgg caactagatt gtacacattt agaaggaaaa
     4441 gttatcctgg tagcagttca tgtagccagt ggatatatag aagcagaagt tattccagca
     4501 gagacagggc aggaaacagc atactttctc ttaaaattag caggaagatg gccagtaaca
     4561 acaatacata cagacaatgg cagcaatttc accagtgcta cagttaaagc cgcctgttgg
     4621 tgggcaggga tcaagcagga atttggcatt ccctacaatc cccaaagtca aggagtagta
     4681 gaatctatga ataaagaatt aaagaaaatt ataggacagg taagagatca ggctgaacat
     4741 cttaagacag cagtacaaat ggcagtattc atccacaatt ttaaaagaaa aggggggatt
     4801 ggggggtaca gtgcagggga aagaatagta gacataatag caacagacat acaaactaaa
     4861 gaactacaga aacaaattac aaaaattcaa aattttcggg tttattacag ggacagcaga
     4921 gatccacttt ggaaaggacc agcaaagctc ctctggaaag gtgaaggggc agtagtaata
     4981 caagataata gtgacataaa agtagtgcca agaagaaaag caaagatcat tagggattat
     5041 ggaaaacaga tggcaggtga tgattgtgtg gcaggtagac aggatgagga ttagagcatg
     5101 gaaaagttta gtaaaacacc atatgtatat ttcagggaaa gctaggggat ggttttatag
     5161 acatcactat gaaagtcctc atccaagaat aagttcagaa gtacacatcc cactagggga
     5221 tgctaaattg gtaataacaa catattgggg tctgcacaca ggagaaagag actggcattt
     5281 gggtcaggga gtctccatag aatggaggaa aaagagatat agcacacaag tagaccctga
     5341 cctagcagac caactaattc atctgtatta ctttgattgt ttttcagaat ctgctataag
     5401 aaaggccata ttaggatata gagttagtcc taggtgtgaa tatcaagcag gacataacaa
     5461 ggtaggatct ctacagtact tggcactaac agcattaata acaccaaaaa agacaaagcc
     5521 acctttgcct agtgttaaaa aactgacaga ggatagatgg aacaagcccc agaagaccaa
     5581 gggccacaga gggagccgca caatgaatgg acactagagc ttttagagga gcttaagaga
     5641 gaagctgtta gacattttcc taggccatgg ctacatggct taggacaaca tatctatgaa
     5701 acttatggag atacttgggc aggagtggaa gccataataa gaattctgca acaactgctg
     5761 tttattcatt tcagaattgg gtgtcaacat agcagaatag gcattattca acagaggaga
     5821 gcaagaagaa atggagccag tagatcctaa cctagagccc tggaagcatc caggaagtca
     5881 gcctaggact gcttgtaaca attgctattg taaaaagtgt tgctttcatt gccaagtttg
     5941 ttttacaaaa aaaggcttag gcatctccta tggcaggaag aagcggagac agcgacgaag
     6001 acctcctcag gacagtcaga ctcatcaaag ttctctatca aagcagtaag tagtacatgt
     6061 actgcaatct ttacaagtat tagcaatagt agcattagta gtagcaacaa taatagcaat
     6121 agttgtgtgg accatagtat tcatagaata taggaaaata ttaagacaaa ggaaaataga
     6181 caggttaatt aatagaataa cagaaagagc agaagacagt ggcaatgaga gcgacggaga
     6241 tcaggaagaa ttatcagcac ttgtggaaag ggggcacctt gctccttggg atgttgatga
     6301 tctgtagtgc tgcagaacaa ttgtgggtca cagtctatta tggggtacct gtgtggaaag
     6361 aagcaaccac cactctattt tgtgcatcag atgctaaagc atatgataca gaggtacata
     6421 atgtttgggc cacacatgcc tgtgtaccca cagaccccaa cccacaagaa gtaaaattgg
     6481 aaaatgtgac agaaaatttt aacatgtgga aaaataacat ggtagaacaa atgcatgagg
     6541 atataatcag tttatgggat caaagcctaa agccatgtgt aaaattaact ccactctgtg
     6601 ttactttaaa ttgcactgat ttaaggaatg ctactaatac cactagtagt agctgggaaa
     6661 cgatggagaa aggagaaata aaaaactgct ctttcaatat caccacaagc ataagagata
     6721 aggtacagaa agaatatgca cttttttata accttgatgt agtaccaata gataatgcta
     6781 gctataggtt gataagttgt aacacctcag tcattacaca ggcctgtcca aaggtatcct
     6841 ttgagccaat tcccatacat tattgtgccc cggctggttt tgcgattcta aaatgtaatg
     6901 ataaaaagtt caatggaaca ggaccatgta caaatgtcag cacagtacaa tgtacacatg
     6961 gaattaggcc agtagtatca actcaactgc tgttaaatgg cagtctagca gaagaagaga
     7021 tagtaattag atctgaaaat ttcacaaaca atgctaaaac tataatagta cagctgaacg
     7081 aatctgtagt aattaattgt acaagaccca acaacaatac aagaaaaagt ataaatatag
     7141 gaccagggag agcattgtat acaacaggag aaataatagg agatataaga caagcacatt
     7201 gtaaccttag taaaacacaa tgggaaaaca ctttagaaca gatagctata aaattaaaag
     7261 aacaatttgg gaataataaa acaataatct ttaatccatc ctcaggaggg gacccagaaa
     7321 ttgtaacaca cagttttaat tgtggagggg aatttttcta ctgtaattca acacaactgt
     7381 ttacttggaa tgatactaga aagttaaata acactggaag aaatatcaca ctcccatgta
     7441 gaataaaaca aattataaat atgtggcagg aagtaggaaa agcaatgtat gcccctccca
     7501 tcagaggaca aattagatgt tcatcaaata ttacagggct gctattaaca agagatggtg
     7561 gtaaggacac gaacgggact gagatcttca gacctggagg aggagatatg agggacaatt
     7621 ggagaagtga attatataaa tataaagtag taaaaattga accattagga gtagcaccca
     7681 ccaaggcaaa gagaagagtg gtgcagagag aaaaaagagc agtgggacta ggagctttgt
     7741 tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaata acgctgacgg
     7801 tacaggccag acaattattg tctggtatag tgcaacagca gaacaatctg ctgagggcta
     7861 ttgaggcgca acagcacctg ttgcaactca cagtctgggg catcaagcag ctccaggcaa
     7921 gagtcctggc tgtggaaaga tacctaaggg atcaacagct cctagggatt tggggttgct
     7981 ctggaaaact catttgcacc actactgtgc cttggaatac tagttggagt aataaatctc
     8041 tgaatgaaat ttgggataac atgacttgga tgaagtggga aagagaaatt gacaattaca
     8101 cacacataat atactcctta attgaacaat cgcagaacca acaagaaaag aatgaacaag
     8161 aattattggc attagataaa tgggcaagtt tgtggaattg gtttgacata acaaaatggc
     8221 tgtggtatat aaaaatattc ataatgatag taggaggctt gataggttta agaatagttt
     8281 ttgttgtact ttctatagtg aatagagtta ggcagggata ctcaccatta tcgtttcaga
     8341 cccacctccc agctcagagg ggacccgaca ggcccgacgg aatcgaagaa gaaggtggag
     8401 agagagacag agacagatcc ggtccattag tggatggctt cttagcaatt atctgggtcg
     8461 acctacggag cctgtgcctt ttcagctacc accgcttgag agacttactc ttgattgtaa
     8521 cgaggattgt ggaacttctg ggacgcaggg ggtggggagt cctcaaatat tggtggaatc
     8581 tcctccagta ttggattcag gaactaaaga atagtgctgt tagcttgctc aacgccacag
     8641 ctatagcagt agctgaggga acagataggg ttatagaaat attacaaaga gcttttagag
     8701 ctgttcttca catacctgta agaataagac agggcttgga aagagctttg ctataagatg
     8761 ggtggcaagt ggtcaaaacg tagtatggct ggatggccta ctgtaaggga aagaatgaga
     8821 cgagccgagc cagcagcaga aagaatgaga cgagctgagc cagcagcaga tggggtggga
     8881 gcagtatctc gagacctgga aagacatgga gcaatcacaa gtagcaatac agcagctact
     8941 aatgctgatt gtgcctggct agaagcacaa gaggaggagg aggtgggttt tccagtcaga
     9001 cctcaggtac ctttaagacc aatgactcac aaggcagcta tggatcttag ccacttttta
     9061 aaagaaaagg ggggactgga agggctaatt cactcccaac aaagacaaga tatccttgat
     9121 ctgtgggtct accacacaca aggctacttc cctgattggc agaactacac accagggggg
     9181 actagatggc cactgacctt tggatggtgc ttcaagctag taccagttga gccagagaag
     9241 atagaagagg ccaatgcagg agagaacaac tgcttgttac accctatgag ccagcatgga
     9301 atggatgacc cggagagaga agggttagag tggaggtttg acagccgcct agcatttcat
     9361 cacgtggccc gagagctgca tccggagtac tacaagaact gatgacctcg agctttctac
     9421 aagggacttt ccgctgggga ctttccaggg aagcgtggcc tgggcgggac tggggagtgg
     9481 cgagccctca gatgctgcat ataagcagct gcttttgcct gtactgggtc tctctggtta
     9541 gaccagatct gagcctggga gctctctggc tagctaggaa acccactgct taagcctcaa
     9601 taaagcttgc cttgagtgct ttaagtagtg tgtgcccgtc tgttgtgtga ctctggtaac
     9661 tagagatccc tcagaccctt ttagtcagtg tggaaaatct ctagca
//