From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: glycoprotein B homolog [feline herpesvirus type 1 FHV-1, Genomic,
Date: 27 Jan 93 06:01:32 GMT
Distribution: bionet
Checksum: 52462 7

LOCUS       S120002      3240 bp    DNA             UNA       21-JAN-1993
DEFINITION  glycoprotein B homolog [feline herpesvirus type 1 FHV-1, Genomic,
            3240 nt]
ACCESSION   S49775
KEYWORDS    .
SOURCE      feline herpesvirus type 1 FHV-1
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Maeda,K., Horimoto,T., Norimine,J., Kawaguchi,Y., Tomonaga,K.,
            Niikura,M., Kai,C., Takahashi,E. and Mikami,T.
  TITLE     Identification and nucleotide sequence of a gene in feline
            herpesvirus type 1 homologous to the herpes simplex virus gene
            encoding the glycoprotein B.
  JOURNAL   Arch. Virol. 127, 387-397 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 120002] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2.  The authors begin their numbering
            at -252.  Zero is not present in the numbering.
FEATURES             Location/Qualifiers
     CDS             253..3099
                     /note="mismatches(255[Q->E],505[G->R],544[I->L]).
                     Description: glycoprotein B homolog;  For the protein
                     sequence (NCBI gibbsq 120003):  Method: conceptual
                     translation supplied by author.  This sequence comes from
                     Fig. 2.
                     Author-given protein sequence is in conflict with the
                     conceptual translation"
                     /codon_start=1
                     /translation="MSTRGDLGKRRRGSRWQGHSGYFRQRCFFPSLLGIAATGSRHGN
                     GSSGLTRLARYVSFIWIVLFLVGPRPVEGQSGSTSEQPRRTVATPEVGGTPPKPTTDP
                     TDMSDMREALRASQIEANGPSTFYMCPPPSGSTVVRLEPPRACPDYKLGKNFTEGIAV
                     IFKENIAPYKFKANIYYKNIIMTTVWSGSSYAVTTNRYTDRVPVKVQEITDLIDRRGM
                     CLSKADYVRNNYQFTAFDRDEDPRELPLKPSKFNTPQSRGWHTTNETYTKIGAAGFHH
                     SGTSVNCIVEEVDARSVYPYDSFAISTGDVIHMSPFFGLRDGAHVEHTSYSSDRFQQI
                     EGYYPIDLDTRLQLGAPVSRNFLETPHVTVAWNWTPKCGRVCTLAKWREIDEMLRDEY
                     QGSYRFTVKTISATFISNTSQFEINRIRLGDCATKEAAEAIDRIYKSKYSKTHIQTGT
                     LETYLARGGFLIAFRPMISNELAKLYINELARSNRTVDLSALLNPSGETVQRTRGSVP
                     SNQHHRSRRSTIEGGIETVNNASLLKTTSSVEFAMIQFAYDYIQAHVNEMLSRIATAW
                     CTLQNREHVLWTETLKLNPGGVVSMALERRVSARLLGDAVAVTQCVNISSGHVYIQNS
                     MRVTGSSTTCYSRPLVSFRALNDSEYIEGQLGENNDLLVERKLIEPCTVNNKRYFKFG
                     ADYVYFEDYAYVRKVPLSEIELISAYVDLNLTLLEDREFLPLEVYTRAELEDTGLLDY
                     SEIQRRNQLHALKFYDIDSIVRVDNNLVIMRGMANFFQGLGDVGAGFGKVVLGAASAV
                     ISTVSGVSSFLNNPFGALAVGLLILAGIVAAFLAYRYISRLRANPMKALYPVTTRNLK
                     QTAKSPASTAGGDSDPGVDDFDEEKLMQAREMIKYMSLVSAMEQQEHKAMKKNKGPAI
                     LTSHLTNMALRRRGPKYQRLNNLDSGDDTETNLV"
BASE COUNT      924 a    748 c    742 g    826 t
ORIGIN      
        1 aacgtccacc cggggtgggt ggacggtgag taaatttcaa agattttact atttcggtga
       61 tgatacgtct ggcgtcacaa caactcagcg gttggcttgg aaatatatcc gtgagctcat
      121 tctagcatct gccatatttt cctccgtgtt tcactgcggt gaggtgaagt tgctacgctc
      181 tgatcgcaca cgaccggcta atacaggtac ccagatctgc ccacccggca tttatctaac
      241 atacgaagaa tcatgtccac tcgtggcgat cttgggaagc ggcgacgagg gagtcgttgg
      301 cagggacaca gtggctattt tcgacagaga tgttttttcc cttctctact cggtattgca
      361 gcgactggct ccagacatgg taacggatcg tcgggattaa ccagactagc tagatatgtt
      421 tcatttatct ggatcgtact attcttagtc ggtccccgtc cagtagaggg tcaatctgga
      481 agcacatcgg aacaaccccg gcggactgta gctacccctg aggtaggggg tacaccacca
      541 aaaccaacta cagatcccac cgatatgtcg gatatgaggg aagctctccg tgcgtcccaa
      601 atagaggcta acggaccatc gactttttat atgtgtccac caccttcagg atctactgtc
      661 gtgcgtttag agccaccacg ggcctgtcca gattataaac tagggaaaaa ttttaccgag
      721 ggtatagctg taatatttaa agaaaatata gcgccatata aattcaaggc aaatatatac
      781 tataaaaaca ttattatgac aacggtatgg tctgggagtt cctatgccgt tacaaccaac
      841 cgatatacag acagggttcc cgtgaaagtt caagagatta cagatctcat agatagacgg
      901 ggtatgtgcc tctcgaaagc tgattacgtt cgtaacaatt atcaatttac ggcctttgat
      961 cgagacgagg atcccagaga actgcctctg aaaccctcca agttcaacac tccagagtcc
     1021 cgtggatggc acaccaccaa tgaaacatac acaaagatcg gtgctgctgg atttcaccac
     1081 tctgggacct ctgtaaattg catcgtagag gaagtggatg caagatctgt atatccatat
     1141 gactcatttg ctatctccac tggtgacgtg attcacatgt ctccattctt tgggctgagg
     1201 gatggagccc atgtagaaca tactagttat tcttcagaca gatttcaaca aatcgaggga
     1261 tactatccaa tagacttgga tacgcgatta caactggggg caccagtttc tcgcaatttt
     1321 ttggaaactc cgcatgtgac agtggcctgg aactggaccc caaagtgtgg tcgggtatgt
     1381 accttagcca aatggaggga aatagatgaa atgctacgcg atgaatatca gggctcctat
     1441 agatttacag tcaagaccat atccgctact ttcatctcca atacttcaca atttgaaatc
     1501 aatcgtatcc gtttggggga ctgtgccacc aaggaggcag ccgaagccat agaccggatt
     1561 tataagagta aatatagtaa aactcatatt cagactggaa ccctggagac ctacctagcc
     1621 cgtggcggat ttctaatagc tttccgtccc atgatcagca acgaactagc aaagttatat
     1681 atcaatgaat tagcacgttc caatcgcacg gtagatctca gtgcactcct caatccatct
     1741 ggggaaacag tacaacgaac tagaagatcg gtcccatcta atcaacatca taggtcgcgg
     1801 cgcagcacaa tagagggggg tatagaaacc gtgaacaatg catcactcct caagaccacc
     1861 tcatctgtgg aattcgcaat gctacaattt gcctatgact acatacaagc ccatgtaaat
     1921 gaaatgttga gtcggatagc cactgcctgg tgtacacttc agaaccgcga acatgtgctg
     1981 tggacagaga ccctaaaact caatcccggt ggggtggtct cgatggccct agaacgtcgt
     2041 gtatccgcgc gcctacttgg agatgccgtc gccgtaacac aatgtgttaa catttctagc
     2101 ggacatgtct atatccaaaa ttctatgcgg gtgacgggtt catcaacgac atgttacagc
     2161 cgccctcttg tttccttccg tgccctcaat gactccgaat acatagaagg acaactaggg
     2221 gaaaacaatg accttctcgt ggaacgaaaa ctaattgagc cttgcactgt caataataag
     2281 cggtatttta agtttggggc agattatgta tattttgagg attatgcgta tgtccgtaaa
     2341 gtcccgctat cggagataga actgataagt gcgtatgtgg atttaaatct tactctccta
     2401 gaggatcgtg aatttctccc actcgaagtt tatacacgag ctgagctgga agataccggc
     2461 cttttggact acagcgagat tcaacggcgc aaccaactcc acgccttaaa attttatgat
     2521 atagacagca tagtcagagt ggataataat cttgtcatca tgcgtggtat ggcaaatttt
     2581 tttcagggac tcggggatgt gggggctggt ttcggcaagg tggtcttagg ggctgcgagt
     2641 gcggtaatct caacagtatc aggcgtatca tcatttctaa acaacccatt tggagcattg
     2701 gccgtgggac tgttaatatt agctggcatc gtcgcagcat tcctggcata tcgctatata
     2761 tctagattac gtgcaaatcc aatgaaagcc ttatatcctg tgacgactag gaatttgaaa
     2821 cagacggcta agagccccgc ctcaacggct ggtggggata gcgacccggg agtcgatgac
     2881 ttcgatgagg aaaagctaat gcaggcaagg gagatgataa aatatatgtc cctcgtatcg
     2941 gctatggagc aacaagaaca taaggcgatg aaaaagaata agggcccagc gatcctaacg
     3001 agtcatctca ctaacatggc cctccgtcgc cgtggaccta aataccaacg cctcaataat
     3061 cttgatagcg gtgatgatac tgaaacaaat cttgtctaac caaccagacc atctctaaat
     3121 ttttatccac aaaaaaagtt agagataata aattttgaac tcaaaaatat cctgtaatgt
     3181 catcattctc cgcccattca cgtcacggtc tctttaaaaa taacccggtt ttgagggtta
//