From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Drosophila copia DNA encoding virus-like particle (VLP) protein
Date: 15 Aug 92 10:01:31 GMT
Distribution: bionet
Checksum: 40845     9

LOCUS       DROCOPIAV    5091 bp ds-DNA             INV       15-AUG-1992
DEFINITION  Drosophila copia DNA encoding virus-like particle (VLP) protein
ACCESSION   X54147 X51988 X51989
KEYWORDS    copia element; virus-like particle.
SOURCE      Drosophila melanogaster DNA.
  ORGANISM  Drosophila melanogaster
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
            Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE   1  (bases 1 to 5091)
  AUTHORS   Yoshioka,K.
  JOURNAL   Unpublished (1990)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Yoshioka,K., Honma,H., Zushi,M., Kondo,S., Togashi,S., Miyake,T.
            and Shiba,T.
  TITLE     Virus-like particle formation of Drosophila copia through
            autocatalytic processing
  JOURNAL   EMBO J. 9, 535-541 (1990)
  STANDARD  full staff_review
COMMENT     From EMBL 27   entry DMCOPIAV;  dated 13-MAY-1991.
FEATURES             Location/Qualifiers
     exon            <431..1604
     CDS             join(431..1604,4501..4607)
                     /product="VLP protein"
                     /codon_start=1
                     /translation="MDKAKRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEV
                     DDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKR
                     LLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIE
                     TLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKP
                     KKIFKGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVK
                     EVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGI
                     VRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSE
                     NQLADIFTKPLPAARFVELRDKLGLLQDDQSNAE"
     mRNA            join(431..1604,4501..4607)
                     /note="VLP protein"
     LTR             1..276
                     /note="5' LTR"
     exon            431..1604
     intron          1605..4500
                     /number=1
     LTR             4500..4816
                     /note="3' LTR"
     exon            4501..4607
     exon            4501..>4607
BASE COUNT     1856 a    722 c    964 g   1549 t
ORIGIN
        1 tgttggaata tactattcaa cctacaaaaa taacgttaaa caacactact ttatatttga
       61 tatgaatggc cacacctttt atgccataaa acatattgta agagaatacc actcttttta
      121 ttccttcttt ccttcttgta cgttttttgc tgtgagtagg tcgtggtgct ggtgttgcag
      181 ttgaaataac ttaaaatata aatcataaaa ctcaaacata aacttgacta tttatttatt
      241 tattaagaaa ggaaatataa attataaatt acaacaggtt atgggcccag tccatgccta
      301 ataaacaatt aaattgtgaa ttaaagattg tgaaaataaa ttgtgaaata gcattttttc
      361 acattcttgt gaaatagctt ttttttcaca ttcttgtgaa attatttcct tctcagaatt
      421 tgagtgaaaa atggacaagg ctaaacgtaa tattaagccg tttgatggcg agaagtacgc
      481 gatttggaaa tttagaatta gggctctttt agccgagcaa gatgtgctta aagtagttga
      541 tggtttaatg cctaacgagg tagatgactc ctggaaaaag gcagagcgtt gtgcaaaaag
      601 tacaataata gagtacctaa gcgactcgtt tttaaatttc gcaacaagcg acattacggc
      661 gcgtcagatt cttgagaatt tggacgccgt ttatgaacga aaaagtttgg cgtcgcaact
      721 ggcgctgcga aaacgtttgc tttctctgaa gctatcgagt gagatgtcac tattaagcca
      781 ttttcatatt tttgacgaac ttataagtga attgttggca gctggtgcaa aaatagaaga
      841 gatggataaa atttctcatc tactgatcac attgccttcg tgttacgatg gaattattac
      901 agcgatagag acattatctg aagaaaattt gacattggcg tttgtgaaaa atagattgct
      961 ggatcaagaa attaaaatta aaaatgacca caacgataca agcaagaaag ttatgaacgc
     1021 gatcgtgcac aacaataata acacttataa aaataatttg tttaaaaatc gggtaactaa
     1081 accaaagaaa atattcaagg gaaattcaaa gtataaagtc aagtgtcacc actgtggcag
     1141 agaaggccac attaaaaaag attgtttcca ttataaaaga atattaaata ataaaaataa
     1201 agaaaatgaa aaacaagttc aaactgcaac atcacacggc attgcgttta tggtaaaaga
     1261 agtgaataat acttcagtga tggacaactg cgggtttgtc cttgattctg gtgctagtga
     1321 ccatcttata aatgatgagt cgctgtatac cgacagtgtg gaggttgtgc ctccacttaa
     1381 gattgcagtg gccaagcaag gcgaatttat ttatgccact aagcgtggta ttgtccgact
     1441 acggaatgac catgagatta cactggagga tgtactcttt tgtaaggaag ctgctggtaa
     1501 tttgatgtcc gtaaagcgtc tccaagaggc aggaatgtcg atcgaatttg acaaaagcgg
     1561 tgtaaccatt tcgaaaaatg ggttaatggt tgtcaaaaat tcaggtatgt taaacaatgt
     1621 acctgtgatc aattttcaag catattctat aaatgctaag cataaaaata attttcgttt
     1681 atggcatgag aggtttggcc atataagcga tggcaaatta ttagaaataa aacgaaagaa
     1741 tatgtttagt gatcaaagtc ttctaaacaa cttagagtta tcatgtgaaa tttgtgaacc
     1801 ctgtttaaat ggtaaacagg caagacttcc ttttaaacaa ttgaaagata agacccatat
     1861 taaaagacca ctttttgtag tacactcaga tgtctgtggg cctattactc cagttacttt
     1921 agatgataaa aattattttg tgatctttgt tgatcagttt acacattatt gtgtaactta
     1981 tttaattaaa tataagggtt gtaaaggttg tgtacttata cattgacaat ggtcgagaat
     2041 acttgtcaaa tgagatgaga caattttgtg ttaagaaagg aatttcttat cacttaacag
     2101 tgccacatac acctcagtta aatggtgttt ctgagagaat gataagaacc attacggaaa
     2161 aagctcgaac catggttagt ggtgcaaagc tagataaaag cttttggggc gaagcagtat
     2221 taactgctac ttatttaatc aacagaattc ctagtagagc acttgttgat agttcaaaga
     2281 ccccatatga gatgtggcac aataagaagc catacttaaa acatttgaga gtgtttggtg
     2341 caactgttta tgtgcatatt aaaaacaaac aaggaaagtt tgatgataaa tcatttaaaa
     2401 gtatttttgt gggctatgaa cccaatggtt ttaagttgtg ggatgctgta aatgaaaaat
     2461 ttattgtcgc aagagatgtt gttgtcgatg aaaccaatat ggttaattct agagctgtta
     2521 aatttgaaac agtgttcctg aaagatagta aggaaagtga aaataaaaat tttccgaatg
     2581 acagtaggaa aataatacaa acagagttcc cgaatgagag taaggaatgc gacaacatac
     2641 aattcctgaa agatagtaag gaaagtgaaa ataaaaattt tccgaatgac agtaggaaaa
     2701 taatacaaac agaattcccg aatgagagta aggaatgcga caacatacaa ttcctgaaag
     2761 atagtaagga aagtaataaa tattttctga atgagagtaa gaaaagaaag cgagatgatc
     2821 acctgaatga aagtaaggga tcaggcaacc cgaatgagag tagggaaagt gaaacagcag
     2881 agcacttaaa agaaattgga attgataatc caactaaaaa tgatggcata gaaattatta
     2941 atagaagaag tgagagatta aagactaagc ctcagatatc ctataatgaa gaggataata
     3001 gtctaaataa agttgttcta aatgctcaca ctatatttaa cgatgtccca aattcatttg
     3061 atgaaattca atatagggat gataaatctt cttgggaaga agccatcaat acagagttaa
     3121 atgctcataa aattaataat acttggacaa ttacaaaaag gcctgaaaac aaaaatattg
     3181 tagatagcag atgggtattt tctgttaaat ataatgaact tggaaatcca attagataca
     3241 aagctagatt ggttgcacga ggattcactc aaaaatacca aatagactat gaagagacat
     3301 ttgctcctgt agctagaatt tcaagtttcc gatttatatt gtcattagta atacagtata
     3361 acttgaaagt ccatcaaatg gatgtaaaaa cagctttctt aaatggcacg ttaaaagagg
     3421 aaatttatat gagacttcct caaggtatat cgtgtaatag tgacaatgtg tgtaaattga
     3481 ataaggcaat ttacggactc aagcaagcgg ctagatgctg gtttgaagta tttgagcaag
     3541 cattgaaaga gtgtgagttt gtaaactctt cagttgatcg ctgtatatat attttagaca
     3601 aaggtaacat caatgaaaac atatatgtat tattatatgt agatgatgtg gttatagcta
     3661 caggagatat gacaagaatg aataacttca aaaggtattt aatggaaaag tttaggatga
     3721 ctgacctaaa tgaaataaaa cattttattg gaattaggat agagatgcag gaagataaaa
     3781 tctatttaag ccaatctgca tatgttaaaa aaattttaag taaattcaac atggaaaatt
     3841 gtaatgcagt tagtactcct ttacctagta aaataaatta tgaattactt aattcagatg
     3901 aagactgcaa taccccatgc cgtagcctca taggatgttt aatgtacata atgctttgta
     3961 cacgcccaga tttaactact gcagtaaata tcttgagcag atatagtagc aaaaataact
     4021 ccgaattatg gcagaactta aaaagagttc ttagatattt gaagggcact atcgatatga
     4081 aattgatttt taaaaagaac ttggcatttg aaaataaaat tattggttat gtggattctg
     4141 attgggctgg tagtgaaatt gatagaaaaa gtacaacagg gtatttattc aaaatgtttg
     4201 attttaatct catttgttgg aatacaaaga gacagaactc agtagcagcc tcatcaactg
     4261 aagctgagta tatggcccta tttgaagccg tgagagaagc tctatggctt aaatttttat
     4321 taactagtat taacattaaa ctagaaaacc ccattaaaat ttacgaagac aatcaaggct
     4381 gtattagcat agcaaacaac ccctcatgtc ataaacgagc taaacatatt gatattaaat
     4441 atcattttgc cagagagcaa gttcagaata atgtgatttg tcttgagtat attcctacag
     4501 agaatcaact ggctgacata tttacaaaac cgttgcctgc tgcgagattt gtggagttac
     4561 gagacaaatt gggtttgctg caagacgacc aatcgaatgc tgaatgaaat ttttatatat
     4621 atttttcaaa tttaaattcc tgtaaacata ttttgttaca atgatctgat cgggtttttc
     4681 tgggttttcc ccgtatcctc gcagcaaatg ctggatcagt taacacttcc cagaatgcac
     4741 accacccaca tttgatagtt actaatgaat attattgtta tgtttttaat tatagacgtt
     4801 atttttgagg gggcgtgttg gaatatacta ttcaacctac aaaaataacg ttaaacaaca
     4861 ctactttata tttgatatga atggccacac cttttatgcc ataaaacata ttgtaagaga
     4921 ataccactct ttttattcct tctttccttc ttgtacgttt tttgctgtga gtaggtcgtg
     4981 gtgctggtgt tgcagttgaa ataacttaaa atataaatca taaaactcaa acataaactt
     5041 gactatttat ttatttatta agaaaggaaa tataaattat aaattacaac a
//