From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: S.cerevisiae Y' element.
Date: 1 Sep 92 10:03:32 GMT
Distribution: bionet
Checksum: 25449    14

LOCUS       YSCYELQ      7087 bp ds-DNA             PLN       01-SEP-1992
DEFINITION  S.cerevisiae Y' element.
ACCESSION   M58718
KEYWORDS    Y' element.
SOURCE      S.cerevisiae DNA.
  ORGANISM  Saccharomyces cerevisiae
            Eukaryota; Fungi; Eumycota; Hemiascomycetes; Endomycetales;
            Saccharomycetaceae.
REFERENCE   1  (bases 1 to 7087)
  AUTHORS   Louis,E.J. and Haber,J.E.
  TITLE     Telomere regions of yeast are complex mosaics of many different
            repeats including a mitochondrial intron
  JOURNAL   Unpublished (1991)
  STANDARD  simple staff_entry
REFERENCE   2  (sites)
  AUTHORS   Louis,E.J. and Haber,J.E.
  TITLE     Evolutionarily recant transfer of a group I mitochondrial intron to
            telomere regions in Saccharomyces cerevisiae
  JOURNAL   Curr. Genet. 20, 411-415 (1991)
  STANDARD  full staff_review
REFERENCE   3  (bases 1 to 7087)
  AUTHORS   Louis,E.J. and Haber,J.E.
  TITLE     The structure and evolution of subtelomeric Y' repeats in
            saccharomyces cerevisiae
  JOURNAL   Genetics 1331, 559-574 (1992)
  STANDARD  simple staff_entry
COMMENT     Accession M58718 bases 1 to 418 appear in Curr. Genet. 20, 411-415
            (1991); bases 1 to 7087 appear in Genetics (in press) 1992.
            Base pairs 317 to 6969 appear in the article titled "Subtelomeric
            Y' repeats of Saccharomyces cerevisiae are homologous to viral and
            transposable elements and exhibit concerted evolution" whereas the
            entire sequence appears in the article titled "Telomere regions of
            yeast are complex mosaics of many different repeats including a
            mitochondrial intron".
FEATURES             Location/Qualifiers
     misc_feature    1..235
                     /note="X element"
     misc_feature    236..316
                     /note="telomere sequence"
     misc_feature    317..6970
                     /note="Y' element"
     CDS             1171..2880
                     /note="putative"
                     /label=ORF1
                     /codon_start=1
                     /translation="MKVSDRRKFEKANFDEFESALNNKNDLVHCPSITLFESIPTEVR
                     SFYEDEKSGLIKVVKFRTGAMDRKRSFEKIVISVMVGKNVQKFLTFVEDEPDFQGGPI
                     PSKYLIPKKINLMVYTLFQVHTLKFNRKDYDTLSLFYLNRGYYNELSFRVLERCHEIA
                     SARPNDSSTMRTFTDFVSGAPIVRSLQKSTIRKYGYNLAPYMFLLLHVDELSIFSAYQ
                     ASLPGEKKVDTERLKRDLCPRKPIEIKYFSQICNDMMNKKDRLGDILHIILRACALNF
                     GAGPRGGAGDEEDRSITNEEPIIPSVDEHGLKVCKLRSPNTPRRLRKTLDAVKALLVS
                     SCACTARDLDIFDDTNGVAMWKWIKILYHEVAQETTLKDSYRITLVPSSDGISVCGKL
                     FNREYVRGFYFACKAQFDNLWGELNNCFYMPTVVDIASLILRNREVLFREPKRGIDEY
                     LENDSFLQMIPVKYREIVLPKLRRDTNKMTAALKNKVTVAIDELTVPLMWMVHFAVDT
                     LTVIQSFSYSLLPVLSATYTSMIQQDASNCTLITTRTVHRSLDLRRLTDSLQITCFIL
                     SLC"
     CDS             2886..6560
                     /note="putative"
                     /label=ORF2
                     /codon_start=1
                     /translation="MQICALGNSYDAFNHDPWMDVVGFEDPDQVTNRDISRIVLYSYM
                     FLNTAKGCLVEYATFRQYMRELPKNAPQKLNFREMRQGLIALGRHCVGSRFETDLYES
                     ATSELMANHSVQTGRNIYGVDSFSLTSVSGTTATLLQERASERWIQWLGLESDYHCSF
                     SSTRNAEDVVAGEAASSDHDQKISRVTRKRPREPKSTNDILVAGQKLFGSSFEFRDLH
                     QLRLCHEIYMADTPSVAVQAPPGYGKTELFHLPLIALASKGDVKYVSFLFVPYTVLLA
                     NCMIRLSRCGCLNVAPVRNFIEEGCDGVTDLYVGIYDDLASTNFTDRIAAWENIVECT
                     FRTNNVKLGYLIVDEFHNFETEVYRQSQFGGITNLDFDAFEKAIFLSGTAPEAVADAA
                     LQRIGLTGLAKKSMDINELKRSEDLSRGLSSYPTRMFNLIKEKSEVPLGHVHKIWKKV
                     ESQPEEALKLLLALFEIEPESKAIVVASTTNEVEELACSWRKYFRVVWIHGKLGAAEK
                     VSRTKEFVTDGSMRVLIGTKLVTEGIDIKQLMMVIMLDNRLNIIELIQGVGRLRDGGL
                     CYLLSRKNSWAARNRKGELPPIKEGCITEQVREFYGLESKKGKKGQHVGCCGSRTDLS
                     ADTVELIERMDRLAEKQATASMSIIALPSSFQESNSSDRCRKYCSSDEDSDTCIHGSA
                     NASTNATTNSSTNATTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNV
                     RTSATTTASINVRTSATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAST
                     NSSTNATTTASTNSSTNATTTESTNASAKEDANKDGNAEDNRFHPVTDINKESYKRKG
                     SQMVLLERKKLKAQFPNTSENMNVLQFLGFRSDEIKHLFLYGIDVYFCPEGVFTQYGL
                     CKGCQKMFELCVCWAGQKVSYRRMAWEALAVERMLRNDEEYKEYLEDIEPYHGDPVGY
                     LKYFSVKRGEIYSQIQRNYAWYLAITRRRETISVLDSTRGKQGSQVFRMSGRQIKELY
                     YKVWSNLRESKTEVLQYFLNWDEKKCREEWEAKDDTVFVEALEKVGVFQRLRSMTSAG
                     LQGPQYVKLQFSRHHRQLRSRYELSLGMHLRDQLALGVTPSKVPHWTAFLSMLIGLFY
                     NKTFRQKLEYLLEQISEVWLLPHWLDLANVEVLAADNTRVPLYMLMVAVHKELDSDDV
                     PDGRFDIILLCRDSSREVGE"
     repeat_region   4930..5361
     repeat_region   6828..6856
     misc_feature    6971..7087
                     /note="telomere sequence"
BASE COUNT     2014 a   1296 c   1872 g   1905 t
ORIGIN      Chromosome VII or XV telomere.
        1 gaatagcagg gtaaggtggg tagtggaggt tggatatggt aattggaggg taacggttat
       61 ggtgcacgat gggttggtgg tagcaagtag agagatggat ggtggttgga gcggtatggt
      121 tgaaggggac agggtaacga gtggggaggt agcgtaatgg agggtaagtt aagagacatg
      181 ctaaatcagg gtaagaatag ggtagggtta gggtagggtt agggtagtgt tagggtgtgg
      241 gtgtggtgtg tgtgggtgtg tgggtgtgtg ggtgtgtggg tgtgggtgtg gtgtgtgggt
      301 gtgggtgtgg tgtgggtata tatatgtcac tgtattgcat gctggatggt gttagacaag
      361 gccgtaggga catatagcat ctaggaagta accttgtacg aaaataggca atatttcctg
      421 tttaggcgat tgtgacgcag attttagtcc aacgatctag cgtcaaggaa tttttttata
      481 gtgggacatt gcaccaagga agtaacttga tacgtcgtgg gtgaatgggt ctgttttctt
      541 attcggcggg gtaatacatt tttgggggaa gtttgtctgt ctgacgcgcc atatgtaggt
      601 acgccaaaaa gggctcctct acttcgaagc gcgaggtcgt atacctaata aggaaatgta
      661 atttataact ttctattata ttggtctttt cgagagcgga agaagttgta ggctaagcgc
      721 aggctaagcg taggtccata tttaaagtat ccaagagaat atccacgaag cggctgagca
      781 acgaacagaa tcctggttct cctcgactaa gcagatagtt aagatactgt gcaccatgga
      841 aattgaaaac gaaagtacgt accgactact ttatttttgc aggccggaaa tcaagcgatg
      901 aatgagacat ccttctgttt tctatgttgg gacagacagt cgcttatctt agtgagattt
      961 cttattaact gaattttctt tgctgctgct ggagatttgc acctgcatag cgcagattct
     1021 gcttcttctc aatagagtag cttaattatt acattcttag atgatgataa gacggaaact
     1081 ggacaatctt ttgtttatat tgatggattt cttgtcaaaa agcataacaa tcaacatact
     1141 attgttaatt tcgaaactta caaaaataaa atgaaagttt ccgataggcg taagtttgaa
     1201 aaagcaaact ttgacgagtt tgagtcggct ctaaataaca aaaacgactt ggtacattgt
     1261 ccctcaataa ctttatttga atcgatcccc acggaagtgc ggtcattcta cgaagacgaa
     1321 aagtctggcc taatcaaagt ggtaaaattc agaactggtg caatggatag gaaaaggtct
     1381 tttgaaaaaa ttgtcatttc cgtcatggtc gggaaaaatg tacaaaagtt cctgacattt
     1441 gttgaagacg aaccagattt ccagggcgga ccaatccctt caaagtatct tattcccaag
     1501 aaaatcaact tgatggtcta cacgttgttt caagtgcata ctttgaaatt caatagaaag
     1561 gattacgata ccctttctct tttttacctc aacagaggat actataatga gttgagtttc
     1621 cgtgtcctgg aacgttgtca cgaaatagcg agtgccaggc cgaacgacag ctctacgatg
     1681 cgtactttca ctgactttgt ttctggcgca cctattgtaa ggagtcttca gaaaagcacc
     1741 ataaggaaat atgggtacaa tttggcaccc tacatgttct tgttactaca cgtagatgag
     1801 ctatcgattt tttctgcata ccaagcaagt ttacctggcg aaaagaaagt cgacacagag
     1861 cggctgaagc gtgatctatg cccacgtaaa cccattgaga taaagtactt ttcacagata
     1921 tgtaacgata tgatgaacaa aaaagaccga ttgggtgata ttttgcatat tatcttgcga
     1981 gcatgtgcgc tcaatttcgg ggcgggtccc cgtggtggcg ctggtgacga agaggatcga
     2041 tctattacga atgaagaacc cattattccc tctgtggacg agcatggctt gaaagtatgt
     2101 aagttgcgta gtcctaacac tccacgaaga ctcagaaaaa cactagatgc cgtgaaagct
     2161 ttattggtgt cgtcttgtgc ttgtactgca agggatttag atatatttga tgacaccaac
     2221 ggcgttgcaa tgtggaaatg gatcaaaatt ctgtaccacg aagtagcgca ggaaaccacg
     2281 ctgaaggact cttatagaat aactttggta ccttcttctg atggtatatc agtatgtgga
     2341 aaacttttta atcgcgagta tgtccgcggc ttttactttg catgcaaggc tcagttcgat
     2401 aacctttggg gagagttgaa caactgcttt tatatgccta cagtggttga tattgccagc
     2461 ctcattttgc gtaatcgaga agttttgttc agagagccaa agcgaggaat tgacgagtat
     2521 ctggaaaacg attcttttct tcaaatgata cctgttaaat atcgtgaaat tgtgctgccc
     2581 aagttgagaa gagatactaa caaaatgacc gcggctctta aaaataaagt cactgttgca
     2641 attgacgagc ttacggtgcc acttatgtgg atggtccatt ttgccgtaga tacccttacc
     2701 gttatccaga gcttcagcta ctcgcttttg ccggtcctca gcgcaacgta tacgtcgatg
     2761 atacaacaag acgcatccaa ctgtacactg attacaacaa gaacggttca tcggagcctc
     2821 gacttaagac gcttgacgga ctcacttcag attacgtgtt ttattttgtc actgtgctaa
     2881 ggcaaatgca aatatgtgcg cttggtaaca gttatgacgc ttttaatcat gatccttgga
     2941 tggatgtggt gggatttgag gatccagatc aagtaacaaa tcgagacatt tcgaggatag
     3001 ttttgtattc ctacatgttt ctgaataccg cgaagggctg tctggttgaa tacgcaactt
     3061 ttcggcagta catgagggaa cttccgaaga atgcacctca gaagctgaat tttcgggaga
     3121 tgcgtcaggg gttgattgcc ctaggacggc actgcgtagg tagcagattt gaaacagatt
     3181 tgtacgagtc ggcgacgagt gaactcatgg ccaatcattc cgttcaaaca gggcgaaata
     3241 tttacggtgt ggattccttt tcgttaacta gtgtcagtgg gacgaccgcc actttattgc
     3301 aggaacgagc ttccgagcgc tggattcaat ggttaggcct tgaaagcgac taccattgtt
     3361 cattctctag tactcggaat gcggaagacg tagtggcagg tgaggcggcg agttcagatc
     3421 atgatcaaaa aatttcaaga gtaacgcgaa aaaggccccg agagcccaag agtacaaacg
     3481 atatcctcgt cgcaggccag aaactctttg gcagctcctt tgaattcagg gacttgcatc
     3541 agttgcgctt atgtcatgaa atatacatgg cagacacacc ctctgtggca gtacaggccc
     3601 caccgggcta tggtaagacg gagttatttc atctcccctt gatagcactg gcgtctaagg
     3661 gcgacgtgaa atatgtgtcg tttctgtttg taccgtacac agtgttgctt gctaattgca
     3721 tgatcaggtt gagccgatgc ggttgcttga atgtggcccc tgtaagaaac tttattgaag
     3781 aaggttgcga tggcgttact gatttatacg tggggatcta cgatgatctt gctagcacta
     3841 atttcacaga caggatagct gcgtgggaga atattgttga gtgcaccttt aggaccaaca
     3901 acgtaaaatt gggttacctc attgtagatg agtttcacaa ctttgaaacg gaggtctacc
     3961 ggcagtcgca atttgggggc ataactaacc ttgattttga cgcttttgag aaagcaatct
     4021 ttttgagcgg cacagcacct gaggctgtag ctgatgctgc gttgcagcgt attgggctta
     4081 cgggactggc caagaagtcg atggacatca acgagctcaa acggtcggaa gatctcagca
     4141 gaggtctatc cagctatcca acacggatgt ttaatctaat caaggagaaa tccgaggtgc
     4201 ctttagggca tgttcataaa atttggaaga aagtggaatc acagcccgaa gaagcactga
     4261 agcttctttt agccctcttt gaaattgaac cagagtcgaa ggccattgta gttgcaagca
     4321 caaccaacga agtggaagaa ttggcctgct cttggagaaa gtattttagg gtggtatgga
     4381 tacacgggaa gctgggtgct gcagaaaagg tgtctcgcac aaaggagttt gtcactgacg
     4441 gtagcatgcg agttctcatc ggaacgaaat tagtgactga aggaattgac attaagcaat
     4501 tgatgatggt gatcatgctt gataatagac ttaatattat tgagctcatt caaggcgtag
     4561 ggagactaag agatgggggc ctctgttatc tattatctag aaaaaacagt tgggcggcaa
     4621 ggaatcgtaa gggtgaatta ccaccgatta aggaaggctg tataaccgaa caggtacgcg
     4681 agttctatgg acttgaatca aagaaaggaa aaaagggcca gcatgttgga tgctgtggct
     4741 ccaggacaga cctgtctgct gacacagtgg aactgataga aagaatggac agattggctg
     4801 aaaaacaggc gacagcttcc atgtcgatca ttgcgttacc gtctagcttc caggagagca
     4861 atagcagtga caggtgcaga aagtattgca gcagtgatga ggacagcgac acgtgcattc
     4921 atggtagtgc taatgccagt accaatgcga ctaccaactc cagcactaat gctactacca
     4981 ctgccagcac caacgtcagg actagtgcta ctaccactgc cagcatcaac gtcaggacta
     5041 gtgcgactac cactgaaagt accaactcca gcactaatgc tactaccact gccagcacca
     5101 acgtcaggac tagtgctact accactgcca gcatcaacgt caggactagt gcgactacca
     5161 ctgaaagtac caactccaac actagtgcta ctaccaccga aagtaccgac tccaacacta
     5221 gtgctactac caccgaaagt accgactcca acactagtgc tactaccact gctagcacca
     5281 actccagcac taatgccact accactgcta gcaccaactc cagcactaat gccactacca
     5341 ctgaaagtac caacgctagt gccaaggagg acgccaataa agatggcaat gctgaggata
     5401 atagattcca tccagtcacc gacattaaca aagagtcgta taagcggaaa gggagtcaaa
     5461 tggttttgct agagagaaag aaactgaaag cacaatttcc caatacttcc gagaatatga
     5521 atgtcttaca gtttcttgga tttcggtctg acgaaattaa acatcttttc ctctatggta
     5581 ttgacgtata cttctgccca gagggagtat tcacacaata cggattatgc aagggctgtc
     5641 aaaagatgtt cgagctctgt gtctgttggg ctggccagaa agtatcgtat cggaggatgg
     5701 cttgggaagc actagctgtg gagagaatgc tgcgaaatga cgaggaatac aaagaatact
     5761 tggaagacat cgagccatat catggggacc ctgtaggata tttgaaatat tttagcgtaa
     5821 aaaggggaga gatctactct cagatacaga gaaattatgc ttggtacctg gccattacta
     5881 gaagaagaga aacaattagt gtattggatt cgacaagagg caagcaaggg agccaagttt
     5941 tccgcatgtc tggaaggcag atcaaagagt tgtattataa agtatggagc aacttgcgtg
     6001 aatcgaagac agaggtgctg cagtactttt tgaactggga cgagaaaaag tgccgggaag
     6061 aatgggaggc aaaagacgat acggtctttg tggaagcgct cgagaaagtt ggagtttttc
     6121 agcgtttgcg ttccatgacg agcgctggac tgcagggtcc gcagtacgtc aagctgcagt
     6181 ttagcaggca tcatcgacag ttgaggagca gatatgaatt aagtctagga atgcacttgc
     6241 gagatcagct tgcgctggga gttaccccat ctaaagtgcc gcattggacg gcattcctgt
     6301 cgatgctgat agggctgttc tacaataaaa catttcggca gaaactggaa tatcttttgg
     6361 agcagatttc ggaggtgtgg ttgttaccac attggcttga tttggcaaac gttgaagttc
     6421 tcgctgcaga taacacgagg gtaccgctgt acatgctgat ggtagcggtt cacaaagagc
     6481 tggatagcga tgatgttcca gacggtagat ttgatataat attactatgt agagattcga
     6541 gcagagaagt tggagagtga aggaaattgt tgttacgaaa gtcagtgatt atgtattgtg
     6601 tagtatagta tattgtaaga aatttttttt tctagggaat atgcgttttg atgtagtagt
     6661 atttcactgt tttgatttag tgtttgttgc acggcagtag cgagagacaa gtgggaaaga
     6721 gtaggataaa aagacaatct ataaaaagta aacataaaat aaaggtagta agtagctttt
     6781 ggttgaacat ccgggtaaga gacaacaggg cttggaggag acgtacatga gggctattta
     6841 gggctattta gggctatgta gaagtgctgt agggctaaag aacagggttt cattttcatt
     6901 tttttttttt aatttcggtc agaaagccgg gtaaggtatg acagcgagag tagaggtaga
     6961 tgtgagagag tgtgtgggtg tggtgtgtgg gtgtgtgggt gtggtgtgtg tgtgggtgtg
     7021 ggtgtggtgt gtgggtgtgg gtgtgggtgt gggtgtgggt gtggtgtgtg ggtgtgggtg
     7081 tggtgtg
//