From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rhesus macaque polyoma virus large T antigen gene, 3' end.
Date: 31 Dec 92 01:40:47 GMT
Distribution: bionet
Checksum: 06444 4

LOCUS       SV4LTA6       354 bp ds-DNA             VRL       17-DEC-1992
DEFINITION  Rhesus macaque polyoma virus large T antigen gene, 3' end.
ACCESSION   M99364
KEYWORDS    large T antigen.
SOURCE      Rhesus macaque polyomavirus (strain EK) (library: ATCC VR-820) DNA.
  ORGANISM  Rhesus macaque polyomavirus
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
            Polyomaviruses.
REFERENCE   1  (sites)
  AUTHORS   van Heuverswyn,H. and Fiers,W.
  TITLE     Nucleotide sequence of the Hind-C fragment of Simian Virus 40 DNA:
            comparison of the 5'-untranslated region of wild-type virus and of
            some deletion mutants
  JOURNAL   Eur. J. Biochem. 100, 51-60 (1979)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Ilyinskii,P.O., Daniel,M.D., Horvath,C. and Desrosiers,R.C.
  TITLE     Genetic analysis of simian virus 40 from brains and kidneys of
            macaque monkeys
  JOURNAL   J. Virol. 66, 6353-6360 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     mutation        replace(24^25,"ggtgtg")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2713-2718 in SV40 strain 776"
     variation       replace(27,"a")
                     /citation=[1]
                     /note="nucleotide 2721 in SV40 strain 776"
     variation       replace(57,"a")
                     /citation=[1]
                     /note="nucleotide 2751 in SV40 strain 776"
     variation       replace(63,"g")
                     /citation=[1]
                     /note="nucleotide 2757 in SV40 strain 776"
     mutation        replace(72^73,"ttatga")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2767-2772 in SV40 strain 776"
     mutation        replace(81..91,"ag")
                     /citation=[1]
                     /note="absent in SV40 strain 776"
     variation       replace(101,"a")
                     /citation=[1]
                     /note="nucleotide 2792 in SV40 strain 776"
     mutation        replace(207^208,"tggctgtcttca")
                     /citation=[1]
                     /partial
                     /note="nucleotides 2899-2910 in SV40 strain 776"
     variation       replace(236,"c")
                     /citation=[1]
                     /note="nucleotide 2939 in SV40 strain 776"
     variation       replace(247,"a")
                     /citation=[1]
                     /note="nucleotide 2950 in SV40 strain 776"
     CDS             complement(3..354)
                     /partial
                     /note="partial"
                     /product="large T antigen"
                     /codon_start=2
                     /translation="FAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGTGVLNWLRN
                     SDDDEENADKNEDGGEKNMEDSGHETGIDSQSQGSFQAPQPSQSSQSVHDQPYHICRG
                     FTCFKKPPPPEPET"
BASE COUNT       89 a     84 c     62 g    119 t
ORIGIN      
        1 ttttatgttt caggttcagg gggaggtggt tttttaaagc aagtaaaacc tctacagatg
       61 tgatatggct gatcatgaac agactgtgag gactgtgagg gctgaggggc ctgaaatgag
      121 ccttgggact gtgaatcaat gcctgtttca tgccctgagt cttccatgtt cttctcccca
      181 ccatcttcat ttttatcagc attttcctca tcatcatcac tgtttcttag ccaatttaaa
      241 actccagttc ccatagccac attaaacttc attttttgat acactgacaa actaaactct
      301 ttgtccaatc tctctttcca ctccacaatt ctgctctgaa tactttgagc aaac
//