From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Yellow fever virus capsid protein, M protein, and envelope protein
Date: 3 Jan 93 22:22:54 GMT
Distribution: bionet
Checksum: 11322 5

LOCUS       YFVCAPSIDM   2367 bp ss-mRNA            VRL       23-DEC-1992
DEFINITION  Yellow fever virus capsid protein, M protein, and envelope protein
            mRNAs.
ACCESSION   L06480
KEYWORDS    M protein; capsid protein; envelope protein.
SOURCE      Flavivirus febricis (strain 17DD-Senegal vaccine) cDNA to mRNA.
  ORGANISM  Flavivirus febricis
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Flaviviridae; Flavivirus (arbovirus group B).
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Jennings,A.D., Whitby,J.E., Minor,P.D. and Barrett,A.D.
  TITLE     Comparison of the nucleotide and deduced amino acid sequence of the
            structural protein genes of the yellow fever 17DD vaccine strain
            from Senegal with that of other yellow fever vaccine viruses
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    889..2367
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="env"
     mat_peptide     37..396
                     /product="capsid protein"
                     /codon_start=1
                     /note="putative"
     mat_peptide     397..663
                     /codon_start=1
                     /note="precursor for M protein; putative"
     mat_peptide     664..888
                     /product="M protein"
                     /codon_start=1
                     /note="putative"
     mat_peptide     889..2367
                     /product="envelope protein"
                     /gene="env"
                     /codon_start=1
                     /note="putative"
BASE COUNT      669 a    485 c    652 g    561 t
ORIGIN      
        1 tcgttgagcg attagcagag aactgaccag aacatgtctg gtcgtaaagc tcagggaaaa
       61 accctgggcg tcaatatggt acgacgagga gttcgctcct tgtcaaacaa aataaaacaa
      121 aaaacaaaac aaattggaaa cagacctgga ccttcaagag gtgttcaagg atttatcttt
      181 ttctttttgt tcaacatttt gactggaaaa aagatcacag cccacctaaa gaggttgtgg
      241 aaaatgctgg acccaagaca aggcttggct gttctaagga aagttaagag agtggtggcc
      301 agtttaatga gaggattgtc ctcaaggaaa cgccgttccc atgatgttct gactgtgcaa
      361 ttcctaattt tgggaatgct gttgatgacg ggtggagtga ccttggtgcg gaaaaacaga
      421 tggttgctcc taaatgtgac atctgaggac ctcgggaaaa cattctctgt gggcacaggc
      481 aactgcacaa caaacatttt ggaagccaag tactggtgcc cagactcaat ggaatacaac
      541 tgtcccaatc tcagtccgag agaggagcca gatgacattg attgctggtg ctatggggtg
      601 gaaaacgtta gagtcgcata tggtaagtgt gactcagcag gcaggtctag gaggtcaaga
      661 agggccattg acttgcctac gcatgaaaac catggtttga agacccggca agaaaaatgg
      721 atgactggaa gaatgggtga aaggcaactc caaaagattg agagatggtt cgtgaggaac
      781 cccttttttg cagtgacagc tctgaccatt gcctaccttg tgggaagcaa catgacgcaa
      841 cgagtcgtga ttgccctact ggtcttggct gttggtccgg cctactcagc tcactgcatt
      901 ggaattactg acagggactt cattgagggg gtgcatggag gaacttgggt ttcagctacc
      961 ctggagcaag acaagtgtgt cactgttatg gcccctgaca agccttcatt ggacatctca
     1021 ctagagacag tagccattga tagacctgct gaggcgagga aagtgtgtta caatgcagtt
     1081 ctcactcatg tgaagattaa tgacaagtgc cccagcactg gagaggccca cctagctgaa
     1141 gagaacgaag gggacaatgc gtgcaagcgc acttattctg atagaggctg gggcaatggc
     1201 tgtggcctat ttgggaaagg gagcattgtg gcatgcgcca aattcacttg tgccaaatcc
     1261 atgagtttgt ttgaggttga tcagaccaaa attcagtatg tcatcagagc acaattgcat
     1321 gtaggggcca agcaggaaaa ttggaatacc agcattaaga ctctcaagtt tgatgccctg
     1381 tcaggctccc aggaagtcga gttcattggg tatggaaaag ctacactgga atgccaggtg
     1441 caaactgcgg tggactttgg taacagttac atagctgaga tggaaacaga gagctggata
     1501 gtggacagac agtgggccca ggacttgacc ctgccatggc agagtggaag tggcggggtg
     1561 tggagagaga tgcatcatct tgtcgaattt gaacctccgc atgccgccac tatcagagta
     1621 ctggccctgg gaaaccagga aggctccttg aaaacagctc ttactggcgc aatgagggtt
     1681 acaaaggaca caaatgacaa caacctttac aaactacatg gtggacatgt ttcttgcaga
     1741 gtgaaattgt cagctttgac actcaagggg acatcctaca aaatatgcac tgacaaaatg
     1801 ttttttgtca agaacccaac tgacactggc catggcactg ttgtgatgca ggtgaaagtg
     1861 ccaaaaggag ccccctgcag gattccagtg atagtagctg atgatcttac agcggcaatc
     1921 aataaaggca ttttggttac agttaacccc atcgcctcaa ccaatgatga tgaagtgctg
     1981 attgaggtga acccaccttt tggagacagc tacattatcg ttgggagagg agattcacgt
     2041 ctcacttacc agtggcacaa agagggaagc tcaataggaa agttgttcac tcagaccatg
     2101 aaaggcgtgg aacgcctggc cgtcatggga gacgtcgcct gggatttcag ctccgctgga
     2161 gggttcttca cttcggttgg gaaaggaatt catacggtgt ttggctctgc ctttcagggg
     2221 ctatttggcg gcttgaactg gataacaaag gtcatcatgg gggcggtact catatgggtt
     2281 ggcatcaaca caagaaacat gacaatgtcc atgagcatga tcttggtagg agtgatcatg
     2341 atgtttttgt ctctaggagt tggggcg
//