From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mus musculus E-beta mRNA, exons and transposon.
Date: 1 Sep 92 10:03:06 GMT
Distribution: bionet
Checksum: 57703     5

LOCUS       MUSEBETA     1526 bp ss-mRNA            ROD       01-SEP-1992
DEFINITION  Mus musculus E-beta mRNA, exons and transposon.
ACCESSION   M73959
KEYWORDS    e-beta domain.
SOURCE      Mus musculus Lymphoma cDNA to mRNA.
  ORGANISM  Mus musculus
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Saito,H., Maki,R.A., Clayton,L.K. and Tonegawa,S.
  TITLE     complete primary structures of the e-beta chain and gene of the
            mouse major histocompatibility complex
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 80, 5520-5524 (1983)
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Malstrom,C.E.
  TITLE     Expression of intracisternal type A particles in normal mouse
            lymphoid tissues and in the B cell lymphoma A20/2J
  JOURNAL   Thesis (1991) Molecular and Cell Biology, Pennsylvania State
            University
  STANDARD  full staff_review
REFERENCE   3  (bases 1 to 1526)
  AUTHORS   Malstrom,C.E., Kotsenas,A.L. and Jones,B.
  TITLE     Interaction ofH-2Eb with an IAP retrotransposon in the A20/2J B
            cell lymphoma
  JOURNAL   Immunogenetics 36, 238-247 (1992)
  STANDARD  full staff_review
FEATURES             Location/Qualifiers
     misc_feature    1..1471
                     /note="Sequence indicates the splicing of an
                     intracisternal A  particle into the transcript of the MHC
                     II E-beta gene. Consensus splice sites appear to have been
                     used.  The exo."
                     /note="putative"
                     /citation=[2]
                     /citation=[3]
     transposon      complement(1..497)
                     /standard_name="intracisternal A particle type II"
                     /note="putative"
     exon            498..767
                     /number=1
                     /note="beta-1 domain"
                     /note="putative"
     exon            768..1049
                     /number=2
                     /note="beta-2 domain"
                     /note="putative"
     exon            1050..1160
                     /number=3
                     /note="transmembrane"
                     /note="putative"
     exon            1161..1184
                     /number=4
                     /note="cytoplasmic domain"
                     /note="putative"
     exon            1185..1198
                     /number=5
                     /note="cytoplasmic domain"
                     /note="putative"
     3'UTR           1199..1471
                     /note="putative"
     conflict        1298
                     /citation=[2]
                     /citation=[3]
                     /citation=[1]
     conflict        1304
                     /citation=[2]
                     /citation=[3]
                     /citation=[1]
     polyA_site      1471
BASE COUNT      389 a    388 c    380 g    369 t
ORIGIN
        1 tcgaaggatc tgtaacatat actgaaaaag actttttgac aaattagctg ccctagtaaa
       61 tttaacatac tgaatggaaa taacacacaa tcccggaaac ttttgttcac atccctgctg
      121 agttatttgt cataatacat ctagttgtat ctggacaaga tctatgagtt gattaaccag
      181 catgagacct ctctgtatct tgacattagc tgaggcctgt tcatctatga ctgtagtcac
      241 tgaggctgac aaagtgttaa tggtgtcagt catctggacc tgtccagaca gagccaaggc
      301 tgtctgaatt aaggccaaac ccagttccca gttactggta aaaaagcagg agaatacttg
      361 agcattatac atcaccgtca ttgggagtgg aaatgtcgac attatccccc aacgctgctc
      421 tctctttatt attgacgccc tggacatcac caagacgagg gacattagta ttcccttggt
      481 cagtctggat ttttcggcac ggtttttgga atacgttaca tctgagtgtc atttctacaa
      541 cgggacgcag cacgtgcggt ttctggagag attcatctac aaccgggagg agaacctgcg
      601 cttcgacagc gacgtgggcg agtaccgcgc ggtgacagag ctggggcggc cagacgccga
      661 gaactggaac agccagccgg agatcctgga ggatgcgcgg gcctcggtgg acacgtactg
      721 cagacacaac tatgagatct cggataaatt ccttgtgcgg cggagagttg agcctacggt
      781 gactgtgtac cccacaaaga cgcagcccct ggaacaccac aacctcctgg tctgctctgt
      841 gagtgacttc taccctggca acattgaagt cagatggttc cggaatggca aggaggagga
      901 aacaggaatt gtgtccacgg gcctggtccg aaatggagac tggaccttcc agacactggt
      961 gatgctggag acggttcctc agagtggaga ggtttacacc tgccaggtgg agcatcccag
     1021 cctgaccgac cctgtcacgg tcgagtggaa agcacagtcc acatctgcac agaacaagat
     1081 gttgagtgga gttgggggct tcgtgctggg cctgctcttc ctgggagcgg ggctgttcat
     1141 ctacttcagg aaccagaaag gacagtctgg acttcagcca acaggactcc tgagctgaga
     1201 tgaagtaaca aggctgaagg aaggagttcc ccccgtgtct ccatgccatg aaaacatgtc
     1261 ctgcttggcc cacatccctc cagagacact gctcttccag gacctggctc ctcctgattc
     1321 tccaccctgg agatctgtgc tcctgatggc tgcttatccc tgacccaggc cttgcagctc
     1381 ccagaacaga ggccccactc ttcagatctc ctgtcccctt ttgtcccttg ccttttgtct
     1441 ggcacttctg agccagtctg ctgtcatatg ctttcttaca tttttctcaa ataaacaaat
     1501 aatgaaagtc aaaaaaaaaa aaaaaa
//