From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: opsin=rod visual pigment [Pomatoschistus minutus=sand goby, eyes,
Date: 6 Jan 93 07:09:54 GMT
Distribution: bionet
Checksum: 55977 4

LOCUS       S113147      1410 bp    mRNA            VRT       08-DEC-1992
DEFINITION  opsin=rod visual pigment [Pomatoschistus minutus=sand goby, eyes,
            mRNA, 1410 nt]
ACCESSION   S45390
KEYWORDS    .
SOURCE      sand goby eyes
  ORGANISM  Pomatoschistus minutus
            Unclassified.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Archer,S.N., Lythgoe,J.N. and Hall,L.
  TITLE     Rod opsin cDNA sequence from the sand goby (Pomatoschistus minutus)
            compared with those of other vertebrates.
  JOURNAL   Proc. R. Soc. Lond., B, Biol. Sci. 248, 19-25 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 113147] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2.
FEATURES             Location/Qualifiers
     CDS             46..1104
                     /note="rod visual pigment;  For the protein sequence (NCBI
                     gibbsq 113148):  Method: conceptual translation supplied
                     by author.  This sequence comes from Fig. 2."
                     /product="opsin"
                     /codon_start=1
                     /translation="MNGTEGPFFYIPMVNTTGIVRSPYEYPQYYLVNPAAYAALGAYM
                     FFLILTGFPINFLTLYVTLEHKKLRTALNLILLNLAVADLFMVFGGFTTTMYTSMHGY
                     FVLGRLGCNVEGFFATLGGEIALWSLVVLAVERWVVVCKPISNFRFTENHAIMGVAFS
                     WIMAATCAVPPLVGWSRYIPEGMQCSCGVDYYTRAEGFNNESFVIYMFIVHFLAPLIV
                     IFFCYGRLLCAVKEAAAAQQESETTQRAEREVTRMVIIMVIGFLTSWLPYASVAWYIF
                     THQGTEFGPLFMTIPAFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEEGA
                     STTKTEASSVSSSSVSPA"
BASE COUNT      322 a    417 c    319 g    352 t
ORIGIN      
        1 gatccaccag agaagggctg aattcaccgc caacaaaccg caaccatgaa cggcacggag
       61 ggacccttct tctacatccc tatggtgaac accaccggca tcgtccggag tccatatgaa
      121 taccctcagt actacctagt caaccctgcg gcctacgctg ccctgggcgc ctacatgttc
      181 ttccttatcc tgacgggctt ccctatcaac ttcctcacac tctatgtcac cctcgaacac
      241 aagaagctgc ggaccgctct aaacttaatt ctgctcaacc tggcggtagc tgacctcttc
      301 atggtgtttg gaggatttac cacaacgatg tatacctcaa tgcacggcta ctttgttctc
      361 ggacgcctcg gctgcaacgt ggaagggttt tttgccactc tgggcggtga gatcgccctg
      421 tggtctctgg tggtcctggc tgttgagagg tgggtggttg tctgcaaacc catcagcaac
      481 ttccgcttca ctgagaacca cgccatcatg ggggtggctt tctcctggat catggccgct
      541 acctgtgctg tgccgcctct ggtcggctgg tcccggtaca ttcccgaggg catgcagtgc
      601 tcatgtggag tcgactacta cacccgcgct gagggcttca acaacgagtc ttttgtcatc
      661 tacatgttca ttgttcactt cctagctccc ctcatcgtga ttttcttctg ctatggccgc
      721 ctgctttgcg ccgtcaaaga agccgctgct gcccagcagg agtccgagac cacccagaga
      781 gctgagcgtg aggtcacccg catggtcatc atcatggtca ttggctttct gacatcttgg
      841 ttgccctacg ccagtgtggc ctggtacatc ttcactcacc agggaacaga gtttgggccc
      901 ctcttcatga ccatccccgc cttctttgcc aagagctccg ctctctacaa ccccatgatc
      961 tacatctgca tgaacaagca attccgccac tgcatgatca ccacgttgtg ctgcggaaag
     1021 aaccctttcg aagaggagga gggcgcctcc accaccaaga ccgaggcctc ctcagtgtcc
     1081 tccagctccg tgtctccagc ataaaacaag accgacactc accacgacac acgccccacg
     1141 aagacgactc ccctgggaaa ccactaaatt ctaataactt ccatttttgt attttcacaa
     1201 atgagctggt tcaacccaaa gacagtacca ggaaaggtcc gtccttaaca gagttgttct
     1261 tgtatgtaca gatatccaac tttactatct gagattttgt cctgaaagaa agaggaggaa
     1321 tcacagttgg atcctaaatg ttactggctt tttgtgatta attttagagg catgtaatca
     1381 aggcaatgta aaataaaagg cactttgcaa
//