From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Ty912 orf...RIM1/YCR29 [Saccharomyces cerevisiae=AB972,
Date: 27 Jan 93 05:54:53 GMT
Distribution: bionet
Checksum: 63199 15

LOCUS       S117585      9210 bp    DNA             PLN       14-JAN-1993
DEFINITION  Ty912 orf...RIM1/YCR29  [Saccharomyces cerevisiae=AB972,
            transposable element Ty912, Genomic, 5 genes, 9210 nt]
ACCESSION   S47818
KEYWORDS    .
SOURCE      Saccharomyces cerevisiae AB972
  ORGANISM  Saccharomyces cerevisiae
            Unclassified.
REFERENCE   1  (bases 1 to 9210)
  AUTHORS   Agostoni Carbone,M.L., Panzeri,L., Muzi Falconi,M., Carcano,C.,
            Plevani,P. and Lucchini,G.
  TITLE     Nucleotide sequence of 9.2 kb left of CRY1 on yeast chromosome III
            from strain AB972: evidence for a Ty insertion and functional
            analysis of open reading frame YCR28.
  JOURNAL   Yeast 8, 805-812 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 117585] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 2.  Map location: III.
FEATURES             Location/Qualifiers
     CDS             1..155
                     /partial
                     /note="Description: Ty912 orf"
     CDS             complement(4796..6802)
                     /note="Description: YCR30 homolog"
     CDS             complement(join(3921..4086,4170..4411))
                     /gene="RIM1/YCR29"
     CDS             7273..9210
                     /partial
                     /note="Description: YCR32 homolog"
     misc_feature    1..515
                     /note="transposable element Ty912 partial homolog"
     CDS             complement(1857..3395)
                     /note="mismatch(104[V->W]).  Description: allantoate
                     permease homolog;  For the protein sequence (NCBI gibbsq
                     117587):  Method: conceptual translation supplied by
                     author.  This sequence comes from Fig. 5.
                     Author-given protein sequence is in conflict with the
                     conceptual translation"
                     /gene="YCR28"
                     /codon_start=1
                     /translation="MMKESKSITQHEVERESVSSKRAIKKRLLLFKIDLFVLSFVCLQ
                     YWINYVDRVGFTNAYISGMKEDLKMVGNDLTVSNTVFMIGYIVGMVPNNLMLLCVPPR
                     IVLSFCTFAWGLLTLGMYKVTSFKHICAIRFFQALFESCTFSGTHFVLGSWYKEDELP
                     IRSAIFTGSGLVGSMFSGFMQTSIFTHLNGRNGLAGWRWLFIIDFCITLPIAIYGFIF
                     FPGLPDQTSAVSKFSMTRYIFNEQELHYARRRLPARDESTRLDWSTIPRVLKRWHWWM
                     FSLVWVLGGENLGFASNSTFALWLQNQKYTLAQRNNYPSGIFAVGIVSTLCSAVYMSK
                     IPRARHWHVSVFISLVMVIVAVLIRADPLNPKVVFSAQYLGGVAYAGQAVFFSWANII
                     CHADLQERAIVLASMNMFSGAVNAWWSILFFASDMVPKFERGCYALLATAISSGIVSV
                     VIRSLQIKENLSKKQVPYIDANDMPGEDDDDDNQDNENDGDDESMEVELHNEEMAEIS
                     NPFR"
BASE COUNT     3000 a   1682 c   1814 g   2714 t
ORIGIN      
        1 tttttggtac taaagcaatg agactaagag atgaagtatc aggaaatcat ctgcacgtat
       61 gctatatcga aaccaaaaag aatattgcag acgtaatgac caaacctctt ccgataaaaa
      121 cattcaaact attaacaaac aaatggattc attagatcta ttacattatg ggtggtatgt
      181 tggaataaaa atccactatc gtctatcaac taatagttat attatcaata tattatcata
      241 tacggtgtta agatgatgac ataagttatg agaagctgtc atcgatgtta gaggaagctg
      301 aaacgcaagg attgataatg taataggatc aatgaatata aacatataaa acggaatgag
      361 gaataatcgt aatattagta tgtagaaata tagattccat tttgaggatt cctatatcct
      421 cgaggagaac ttctagtata ttctgtatac ctaatattat agcctttatc aacaatggaa
      481 tcccaacaat tatctaatta cccacacatt tctcactatt ctcggtaaag gttataatat
      541 tagtgttgga ataaaactct aaaataccat ccattcagaa gtattcatgc tactagcatt
      601 ttatcacatg aggtgtaaga agatgacata aagattgaga tacagtcatc aaacctaatg
      661 gaagcgaaat gcagggattg ataatgtaat aagataatga aacataagaa acagaaggta
      721 ggagtattat tatgtagaaa taccgattcc attttaagga ttcctatgtc ctcgagtaga
      781 acgtctagta tatacgaaat attataccct ttaaaaaaca gtggacccaa cgataatcac
      841 aacattcacc gatttctcac ctgaacagat cacgatcatc cttcagaaca tcttgctgta
      901 gccatattaa attcctttgt ctctggactc tttctcgcgc gactgatctc ccaatgaaga
      961 actgcgtcag gtcatctcgt cctcaatttc taaccaaaat tggatgattt tagttctcac
     1021 tgacgctgct tgaacgttaa caccgaaaga gcatgcaata atcacagcac ggtaaaccaa
     1081 cttgtgtcat atttaagaga aatattaaaa cgctaagaag atagctccca taatagaagt
     1141 acaagttata tttatcgttg tccaactgca gaagttaaat aaaggtaaat aaatcgagct
     1201 aagagaaaaa aaaagtatag gcaaaattcc gaccggagct agctttatct tgctcctcca
     1261 cctaagtcac ctgctcaggt cactcaagtt cacaatcttc tgagaggata gataaaggaa
     1321 aaattggaac agatcttttc atggcctggc aattgtctgt ggattggtaa agctctgtca
     1381 gtgaaaaaaa aagttctcgc tccttcttgg tctcttctat tgcctgagat tctaatgctt
     1441 tccttacatt gtttcataaa ataaccaatt tttcgtgtca caataatctt gaaatttgaa
     1501 gtttctaaaa tgcatcagac atggtgtcgt aattagttga cttactttaa cttctaccaa
     1561 gaagtagaaa atagcagagt gcgtgaacgc atagcagaga acaaaatact tactaaacct
     1621 tttcgaataa gttagcaaga agcttttaaa aacatagact tagaaattgt cctgcacttg
     1681 gcaaggaaga aaagaaagat tagttaaaca gaaatcgaaa aatgcatgat gaaaaactaa
     1741 gtagacctct ttagaagtgt cttagcggct attgttcatg atacttttga aaagagccct
     1801 gagattttcc attaccatca acaggaccaa tgaatagcta aaagaatcga atgtatctat
     1861 cggaaaggat ttgaaatttc ggccatttcc tcattatgaa gttcaacttc catactctcg
     1921 tcgtcgccat cattttcatt atcctggttg tcgtcatcgt catcttctcc gggcatgtca
     1981 ttagcatcta tataaggaac ctgtttctta gacaaattct cttttatctg tagtgagcgt
     2041 atgacgaccg agacaattcc gcttgatatt gccgtagcca agagggcgta gcaacctctc
     2101 tcaaacttgg gcaccatatc tgaagcaaag aataatatag accaccatgc gttaacggcc
     2161 cctgaaaaca tattcatgga agcaagaacg atagcacgtt cttgaagatc tgcatgacaa
     2221 ataatgtttg cccacgaaaa aaaaaccgct tgtccagcgt atgctacgcc tccaagatac
     2281 tgtgcagaaa agacgacttt tggatttagt gggtctgcac gtattagtac cgcaacaata
     2341 accattacca atgatatgaa aacagaaaca tgccaatgcc tagctcttgg gatcttactc
     2401 atatatacag cagaacaaag cgtagaaact atacctacgg caaatatccc cgaaggataa
     2461 ttatttcttt gcgccaacgt atatttttgg ttttgtaacc ataatgcaaa tgtagaatta
     2521 gatgcgaaac ccaagttctc acctcccaga acccaaacaa gagagaacat ccaccagtgc
     2581 caccttttta agactctagg aatagtcgac cagtctaacc gggtgctttc gtccctagcg
     2641 gggagccttc tcctagcata atgtagctct tgttcattaa aaatgtatct cgtcatagaa
     2701 aatttgctaa cagcacttgt ttgatcagga aggccgggga agaaaataaa cccataaatt
     2761 gcaatgggta atgtgataca aaaatcaata atgaataacc atctccaacc cgccaagcca
     2821 ttccgcccat tcaaatgagt aaagatactt gtttgcataa atccactgaa catagatccc
     2881 accaaaccgc tacctgtaaa aatagcactt ctaatgggca attcgtcttc tttataccac
     2941 gaacccaaaa caaaatgtgt tcctgaaaat gtgcaactct caaataaggc ttgaaagaat
     3001 ctaattgcgc aaatatgttt gaacgatgta actttgtaca ttcccaaggt caataaaccc
     3061 caagcaaacg tacaaaaact tagccatatc ctgggcggaa cacacaataa cattaaatta
     3121 ttggggacca tacctacaat gtaaccaatc atgaaaactg tgttagacac ggtcaaatcg
     3181 tttccgacca tcttaagatc ttccttcata ccggatatat atgcattggt gaaaccgaca
     3241 cggtcgacat aattaatcca gtattgcaag caaacaaatg atagcacaaa caagtctatt
     3301 ttaaacagaa gtaatctctt tttaatggca cgcttggaag aaacagattc tctctcaacc
     3361 tcatgttgag tgatagattt cgattccttc atcatgactt aggcccaggc tctctccaat
     3421 caaaaattct gaaaacagct tctcaatctt gaataaatcg gaatactttt atatcagaat
     3481 tacaggtccg cctcatttct cttaagagcc gatgtcttcc tttacaatat acgcatgtag
     3541 aagatttgat cgatgctgag ttcttgtaat tcgtcaaaaa tgcctttcaa gatcgactac
     3601 tcaaaatcta caataatcgg actgcatgga tcaatggagg tgtaggcaat tttgtaacaa
     3661 tgaaggatat gttaaattcg ctaaagcttc ctcctctttt gctaaatttc atcatcaaaa
     3721 agcattttgc ataacacacg ttaaccaata tattatagta tatatacatt ctatttgaga
     3781 ataagcatag ttttacataa ctagttcgtt attccaaatg tatttttcct atttgccata
     3841 aatattttaa gtaaaagaaa gcatgctcta gataaaaaat atcgaggaag agtcgaaata
     3901 agcaagcgta aatattacaa ttattctgaa gaagcagcat tttcttggcc ctcagcatct
     3961 tctaatttct tcccattctt caataaatta atgtcctttt gaactaagct caaagtagta
     4021 cccttagaac cgtcgtctct ctcgaagaca tagttagcag catctgcttc aacatatacc
     4081 aaagcgctga ataaattatg gaaaggaaat gttagtaaat tataacgcgt aattgtaaag
     4141 taagtaaaat tgaagaataa ataacatacc cttttctaac atattctgtc aaaaaattga
     4201 tttgaggttc attgaaaacg gtgatattat accaattggt ttggccatct cttcttggtt
     4261 gcgaagcgat actatatttc aaataacgat tgttattagc agaagtatgt tcagtgaatt
     4321 cagagccaat gcggccgacg atggacattt tcgagaagtc catcttcttg gtagtagcat
     4381 ggaagaaacg agcttgagta cgtaaaaaca ttacaatgga ttagtggatt tttgtttgtt
     4441 ttgtatttgt caaggacaca caattagcaa atgacttgtt atcaaattcg tggtatttgt
     4501 ctttctcaac tactgtgtta gctttttttt ttcgtctggg cgcaaacgcc ttttaagcac
     4561 tcctccacaa ataataagta ttagatgaaa agtcctaaaa gtccgaaaaa tggaatagaa
     4621 aagaacgaaa atacagaatc tttacagaac attatagtac ataagtgtag ttctacgtaa
     4681 gtcttaaaca aaggtttcaa aaggaaaata tgatttagcg gcgccacctc cataaattat
     4741 ggattagcaa acaaaagaac aattaatatt gaaaaataga agcatagcag aaatatcaag
     4801 cgagaccatg gtagttacca gtggtcaaag ttctttttgt gtttacatcg agccactcac
     4861 caccaaatgg attgttttca tccagctcct gacaagtcaa ggtgattcca ctgccggctc
     4921 cgctatgggg tagagccacg ttatccgtct cactgatagt gaatttggta atcacgcctt
     4981 tagcggattc atgtgccagg ccgtctgtaa taaatctggc gattaatctt tgaccttcac
     5041 catttcttgt caaaacaact ggttctttaa atctccacgt tattctcttc ttttctttac
     5101 tgaaggagcc ctgaggtttt gataaagcgc ttgttgcatt agcaccatcg atattcacaa
     5161 agacaacgag gtcttctatt acgatttgtg atatttcatc gggtaagctt ggtgacatct
     5221 tgacagtcaa tacaacactt gcctggtgag tttcaaatct ccagaccgga tgaataacaa
     5281 taggcgcgat cggctccttt atggaatatt taatagctcc taaggttcta gaatcgataa
     5341 atgaagggtt aactttgaat tcttctggag caacacgctc aataaaggct tggttcagaa
     5401 tgaccttttc gaacttagcg ccattattga ttctcaaatt aataccgata ggtaaaggcg
     5461 aattcatgac agaattgggt aaatagttga gggcaatttc cccaatcagt tgggagttct
     5521 gcaacatacc gtctttgaaa gaagcattga gcacttctgc gatactagca ttcaacccaa
     5581 attgagatgt atctaaagag gagtgctgaa acaacgattg accaactaaa gatgttgaag
     5641 agcccgtggc ttgaggattt agttctctta gctcgccagt aatctgagag gagagtgtgg
     5701 aaactggacg ttcctgggga atagaggaca aggaagaaga agtaggggta gcgcctgagc
     5761 cgtgattagg caaagagtca tagagttgag aatccctgtt atgaatgaaa ttttgtttcc
     5821 ttgagggtgg taaagcaggt gcgcggatat gcaagggcct tgaatcaact tgacctgaag
     5881 gttggttatc aaccgtagca gtaggaagtg aaatactggg agaggcaggc tcaactggta
     5941 atggttttgt ttttgattgt ggctgaagtg gaggttgaga aattgatatc ggtactgtct
     6001 tgggtaagtt acttgagtct ggttctttcg cagtgggtgg agaactttgt tgtggcgttg
     6061 aaggaggcac ttcagaagga gtaaaagttt gcgcaggtgg tgtatcggca gtaacaggtg
     6121 catctacgtt tttaggagta gcatggggag gaagaggagg agtgtcacta gcttcacccg
     6181 gggtccaatt gtttgatttt gatgatgaat aggtgggtcg acgttgcttc tgataaatag
     6241 aagaagttgc agttgaagac actctggtgg aagaattatt cggagtctca gtgatggatg
     6301 cctgaatatg agagtttgat gatgattgtt gttgtctctt gttcttggtc ttatttctac
     6361 cgaaaattga gcccacttta gatcttaggg tgtgggacga cttttttgat ttcaaggaag
     6421 aattattagt agagtctgaa aattcgttat tcatgagatc attatgagtg agactggaag
     6481 atgcagaggc aagacgatgt ccaatgtttc caaatgcact cttacgctta tccttttgtg
     6541 gggatttctt ttctctttcc gtattagcgg caccattgga tacagagacc gggcgggcac
     6601 cagtggcaga agctggcgaa gcattattag gaactacttc tttggaagaa gaggatagtt
     6661 ggaagttgta ttgactggca tctttggcaa aacgatcaat ttcactttgc ggttcgaatg
     6721 ccaggaattt cgtcatcacc gtttcgcatt ctttggtagt atttagtaaa taatcgctaa
     6781 aactggtttg aaatctaagc atacagtttt ttaaagtgtc caaacggtta tagtcaatag
     6841 tctcgaacag ctcaaacaaa taggggcttt gctggtccca ttgccttctt gcctcttcta
     6901 agtgactaga gttttcgtta ttcttactat agtgctcaat tgaagctgca tttttactaa
     6961 gcttggaatg tagttagaca gatcaaaaac caagtttacg aatggaaaaa tgcaagatca
     7021 gaatacgtca cccaaaacaa taaaaagtgc cttattttat ttagaaaaga caacacatcc
     7081 ttagatttta aaatcaaaaa gtccatatca agatacactt acaacctcaa aacggataga
     7141 gaagaaaatg cagttttcta tcgaaataat ttaaatcttt tgatttttca tctgaaacat
     7201 acactggaga tacaatcaaa tccaaattcg tcctgcaagt ggtcatcgga ctttgcagaa
     7261 gattttgatg ggatgaaacg gaggcttttg cctgcttggg aaccaaaata tgaaccactc
     7321 attaacgagg aagatgctaa tcaagatact ataacaggtg gtaacagaca aaggagagaa
     7381 agtggaagca ttttatccta cgaatttatc gaacatatgg agactcttga gtcggagcca
     7441 gttggagatt tgaatgagaa tagaaaaatt cttagacttt tgaaggataa cgattccatt
     7501 gcaactattt ggaattgcag tttgattatt ggattagaaa ttaaggaggg gattttaatt
     7561 catggcagta attaccttta ctttgtaagt gattactatt ttagtttaga ggataaaaag
     7621 attctaaaat tatcagaagt atcgcaagaa tcacgggata tgacggttag cttaattaac
     7681 ggccctgatg ttaaaagggt atcaactttc ctaaagcacg aagtctttgt ttggaaactt
     7741 ctcgatatca ctttcgttac caaacgaccc tttctacttc gggatgtcgc catcgaatta
     7801 ttgttcaaag agagagttag cgcttttttt agtttttaca acaaaagagt gagagatgac
     7861 gttttacggg tactgaataa gatcccgaag caccttccag cagatccaat tttttcaagc
     7921 gttttacaag aaataaacga ccgaggaaat agtatagtgg caagaaatgg aataggaaag
     7981 gcaagcattg cttctaaatt cactagcgtc ttctcagcga acaacagcct aatagatgga
     8041 tttgagatca gcaaaaaatg ggttagggga gagatttcta atttttatta cctgttgagt
     8101 atcaacatcc tagcgggaag gtcattcaac gatttgaccc aatatccagt gtttccgtgg
     8161 gttattgcag attacgaaag taacgtactc gatttagaga atcctaaaac ttaccgggac
     8221 ctatcgaaac ctatgggcgc tcaaagtgag aaaaggaaat tacagtttat agagcgttat
     8281 gaagctttgg cttccctgga aaatgctgat tccgcaccat ttcattatgg cacgcattat
     8341 tcctcagcta tgatagtatc ttcatatctg ataaggctga agccctttgt cgaatccttt
     8401 ttgttattgc aaggcggaag ttttggccct gcagatcgtt tatttagttc gcttgaaagg
     8461 gcctggagct ctgcttcttc tgaaaataca acggatgtca gggaattgac acctgaattt
     8521 ttttttctac ctgaattttt gatcaacgtt aatagttatg actttggtac agaccaaagc
     8581 ggtaaaaaag ttgacgacgt cgtacttcca ccctgggcaa atggtgaccc aaaggttttc
     8641 attcaaaaga atagagaagc tttagaaagt ccttatgtat cagcacattt acatgaatgg
     8701 attgatttga tatttggtta caaacaaaag ggggacattg ctgtgaaatc tgttaacgta
     8761 ttcaacagat tgagttaccc aggcgctgta aatctagata acattgacga tgaaaatgag
     8821 cgcagagcta tcacaggcat tattcacaac tttggtcaaa cgcctttaca aatatttcag
     8881 gaacctcatc cggaaaaaat agcctgcaat gttcaacagc taacaacaga ggtatggcgt
     8941 aaggttccaa tgaagccaat atttgagaag acaatcttta atttgaatga aaagaacagg
     9001 tccgtcgatt atgttataca cgatcctagt tacttcgatt cattatactg gaggggcttc
     9061 gctttcccaa acttgttttt cagaacggaa gaatcgttag tgtcattgag aattgtgcat
     9121 aaaaattggt taaaaattgg actagatatt tttaaaaaga cgcatatggc tcagattaca
     9181 tcgtttgcgt actggaagtt gggcgaattc
//