From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rickettsia tsutsugamushi 56 kDa outher membrane protein gene,
Date: 5 Nov 92 23:13:02 GMT
Distribution: bionet
Checksum: 11389 5

LOCUS       RIR56OMPA    1874 bp ds-DNA             BCT       14-OCT-1992
DEFINITION  Rickettsia tsutsugamushi 56 kDa outher membrane protein gene,
            complete cds.
ACCESSION   L04956
KEYWORDS    56 kDa outer membrane protein.
SOURCE      Rickettsia tsutsugamushi (individual_isolate patient B119, strain
            Boryong) DNA.
  ORGANISM  Rickettsia tsutsugamushi
            Prokaryotae; Gracilicutes; Scotobacteria; Rickettsias and
            Chlamydias; Rickettsiales; Rickettsiaceae.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Kim,I.-s., Seong,S.-y., Woo,S.-g. and Chang,W.-H.
  TITLE     High-level expression of the gene for 56 kDa antigen of Rickettsia
            tsutsugamushi boryong strain and its application to ELISA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     -35_signal      141..146
     -10_signal      165..170
     RBS             262..266
     sig_peptide     273..335
                     /codon_start=1
     CDS             273..1874
                     /product="56 kDa outer membrane protein"
                     /codon_start=1
                     /translation="MKKIMLIASAMSALSLPFSASAIELEDEVGLECGPYAKVGVVGG
                     MITGAESTRLDSTDSEGKKHLSLTTGLPFGGTLAAGMTIAPGFRAELGVMYLRNISAE
                     VEVGKGEVDSKGEIKADSGGGTDAPIRKPFKLTPPQPTMSPISIADRDFGIDIPNIPQ
                     AQRQAAQPPLNDQKRAAARIAWLKNCAGIDYMVKDPNNPGHMMVNPVLLNIPQGNPNP
                     VGQPPQRANQPANFAIHNHEQWRSLVVGLAALSNANKPSASPVKVLSDKIIQIYSDIK
                     PFADIAGINVPDTGLPNSASIEQIQSKIQELGDTLEELRDSFDGYINNAFVNQIHLNF
                     VMPPQAQQQQGQGQQQQAQATAQEAVAAAAVRLLNGSDQIAQLYKDLVKLQRHAGIRK
                     AMEKLAAQQEEDAKNQGKGDCKQQQGASEKSKEGKVKETEFDLSMVVGQVKLYADLVT
                     TESFSIYGGVGAGLGSYTYAKIDNKDVKGYTGMVASGALGVAINAAEGVCVDLEAGYM
                     HSFSKVEDKYQVNAFIASACVRYNF"
BASE COUNT      611 a    285 c    431 g    547 t
ORIGIN      
        1 tttaaacata tatataagag cagtgttcta ttgaatgttg tctttaagtt atatataaaa
       61 aataaaaata aattttacaa tggataaaac gctttgaagc gatattttta acacagtgtt
      121 ttatagattg tttaaattat tttacaagta ctattaaata ttagtatact aaataatagt
      181 tttttgatat aaaactaagt tagtgtggct aaataattag tttagaatgg ttaccactaa
      241 aaaataaatt taattctttt aaggagatta gaatgaaaaa aattatgtta attgctagtg
      301 caatgtctgc gttgtcgttg ccgttttcag ctagtgcgat agaattggag gatgaagtag
      361 gattagagtg tggtccttat gctaaagttg gagttgttgg aggaatgatt actggtgcag
      421 aatctactcg cttggattca actgattctg agggaaaaaa acatttgtca ttaacaactg
      481 gactgccatt tggtggtaca ttagctgcgg gtatgacaat tgcaccagga tttagagcag
      541 agctaggtgt tatgtacctt agaaatataa gcgctgaggt tgaagtaggt aaaggcgagg
      601 tagattctaa aggtgagata aaggcagatt ctggaggtgg gacagatgct cctatacgta
      661 agccgtttaa acttacacca cctcagccta ctatgagtcc tataagtata gctgatcgtg
      721 actttgggat tgatattcct aacatacctc aggcgcaacg gcaagctgca cagcctccgc
      781 ttaatgatca gaagcgtgct gcagctagga tcgcttggtt aaagaattgt gctggtattg
      841 actatatggt gaaggatcct aataatcctg ggcatatgat ggtaaatccg gtgttgttaa
      901 atattccaca gggcaaccct aatcctgttg gacagccacc gcagcgagca aatcagcctg
      961 caaattttgc gatacataac catgagcaat ggaggagttt ggtagttggt cttgctgcat
     1021 tatcaaatgc taataaacct agcgcttctc ctgtcaaagt tttgagtgac aaaattattc
     1081 agatatatag tgatataaag ccatttgctg atatagctgg tattaatgtt cctgatactg
     1141 gtttgcctaa tagtgcatct atcgaacaga tacagagtaa aatccaagaa ttaggtgata
     1201 cattggaaga actcagagat tcttttgatg ggtatattaa taatgctttt gttaatcaga
     1261 tacacttgaa ttttgtcatg ccgccgcaag cacagcaaca gcaggggcaa gggcagcaac
     1321 agcaagctca agctacagcg caagaagcag tagcagcagc agctgttagg cttttaaatg
     1381 gcagtgatca gattgcgcag ttatataaag atcttgttaa attgcagcgt catgcaggaa
     1441 ttaggaaagc catggaaaaa ttagctgccc aacaagaaga agatgcaaag aatcaaggta
     1501 aaggtgactg caagcagcaa caaggagcat ctgaaaaatc taaagaagga aaagtcaaag
     1561 aaacagagtt tgatctgagt atggttgttg gccaagttaa actctatgct gacctagtta
     1621 caactgaatc attctcaata tacggtggtg ttggtgcagg gttaggatct tatacttatg
     1681 caaaaataga taataaggat gttaaagggt atacaggcat ggttgcatca ggagcacttg
     1741 gtgtagcaat taatgctgct gagggtgtat gtgtggactt agaggctggt tatatgcact
     1801 cattcagtaa agtagaagat aagtaccaag taaacgcgtt tattgcaagt gcatgtgtac
     1861 gctataactt ctag
//