From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bacteriophage alpha3 genes A, B, K, C, D, E, J, F, G, H.
Date: 29 Jul 92 10:01:07 GMT
Distribution: bionet
Checksum: 58778    13

LOCUS       AL3CALPHA    6087 bp ds-DNA             PHG       29-JUL-1992
DEFINITION  Bacteriophage alpha3 genes A, B, K, C, D, E, J, F, G, H.
ACCESSION   X60322
KEYWORDS    gene B; gene C; gene D; gene E; gene F; gene G; gene H; gene J;
            gene K; gene a.
SOURCE      Bacteriophage alpha3 DNA.
  ORGANISM  Bacteriophage alpha3
            Viridae; ds-DNA nonenveloped viruses; Siphoviridae.
REFERENCE   1  (bases 1 to 6087; 1 to 6087)
  AUTHORS   Kodaira,K.I.
  JOURNAL   Unpublished (1991)
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 6087)
  AUTHORS   Kodaira,K.C., Nakano,K., Okada,S. and Taketo,A.
  TITLE     Nucleotide sequence of the genome of the bacteriophage alpha3:
            interrelationship of the genome structure and the gene products
            with those of the phages, phiX174, G4 and phiK
  JOURNAL   Biochim. Biophys. Acta 1130, 277-288 (1992)
  STANDARD  full automatic
COMMENT     *source: clone_library=al3wt; *source: isolate=wildtype;
            From EMBL    entry BACALPHA;  dated 13-MAY-1992.
FEATURES             Location/Qualifiers
     misc_feature    1..6087
                     /note="whole genome of bacteriophage alpha3"
     CDS             759..2243
                     /gene="A"
                     /codon_start=1
                     /translation="MATEIFSDVVKSVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQL
                     EKRLSEETHLDDETLAIYESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDAECVFL
                     FEMICPGVRYGKTLNSLWTKYVVQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTR
                     KNRMTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRA
                     EGRSVKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSHDPNFGRKVRNYRQI
                     NSFRGMWPYGFTQPIAVRYQHDAYSRKGWLWPVDKTGKAMQSKPYQAVAWYVTKYVAK
                     QSDQRQKAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRI
                     SFDSSPLYQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKTIRRLMKKTPEFNWQ
                     SSIASMTVTLKNGDISDEARQYIIDAGITPTDLRAKATQTFGGK"
     CDS             1805..2158
                     /gene="B"
                     /codon_start=1
                     /translation="MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQ
                     LRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAE
                     FYRFNDGHFKKWGYF"
     CDS             2158..2319
                     /gene="K"
                     /codon_start=1
                     /translation="MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSL
                     LCKLSRHFD"
     CDS             2270..2476
                     /gene="C"
                     /codon_start=1
                     /translation="MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQ
                     WFQIEDWKGNHKKLLDDLKKRDYL"
     CDS             2503..2955
                     /gene="D"
                     /codon_start=1
                     /translation="MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIAT
                     DRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFS
                     ENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK"
     CDS             2675..2902
                     /gene="E"
                     /codon_start=1
                     /translation="MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSL
                     AKTLSMASSARLTPLSSSRTPCVLKQDSKKL"
     CDS             2957..3031
                     /gene="J"
                     /codon_start=1
                     /translation="MKKARRSPSRRKGARLWYVGGSQF"
     CDS             3067..4362
                     /gene="F"
                     /codon_start=1
                     /translation="MSNVQTSAEREIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFEL
                     DAVGALRLSPLRRGLAIDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNR
                     YPDHAGYVGTIVPANNRIPKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARYR
                     FRCCHLKNIWSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQERTYFMQRYRD
                     VISSFGGSTSYDADNRPLLVMHTDFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRF
                     FVPEHGVMMTLALIRFPPISPLEHHYLAGKSQLTYTDLAGDPALIGNLPPREISYRDL
                     FRDGRSGIKIKVAESIWYRTHPDYVNFKYHDLHGFPFLDDAPGTSTGDNLQEAILVRH
                     QDYDACFQSQQLLQWNKQARYNVSVYRHMPTVRDSIMTS"
     CDS             4396..4959
                     /gene="G"
                     /codon_start=1
                     /translation="MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAE
                     RAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRF
                     ESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSA
                     KWTSGRVIGTIATTQVIHEYQVLQPLK"
     CDS             5095..6087
                     /gene="H"
                     /codon_start=1
                     /translation="MLGAVVGGIASALASGAASKLFGGSQRGVSVMQQGAESAGLTNG
                     GGAISMDNDQGIQSAIQGSNVPPAGQLPESQNSGVMADAGNMLRNAGKSLLDGTIQAG
                     SDKVKQALIDKLIGGNDAKDRGKATRDYLAAAFPELNPWERAGAGASTAGLESSAQNQ
                     QKEMLKMQLDNQKDIAKMQMDNNLQIAGIQSATSRQNTKDSVYAQNEMLQYNQRESQA
                     RVASILANTDLTTKQATHEIMRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDT
                     QNSRYGSSQVTAAAKDVTNMITDAASGASDWVSQQWNSFFKDGKSNGISLNTRK"
BASE COUNT     1431 a   1325 c   1425 g   1906 t
ORIGIN
        1 ttgttgacat tccctaaacc cttatgagac tcttgcttca acgaaacgaa gtaggagtct
       61 tttttatgaa accagctcat cgcctctatc atcctgtgct tggttcttgg ttgtttaagt
      121 gccccgttta tgttcgttat gagtcccttc atcacggtcg cctcattaag gttcgtgctg
      181 ttcgtgacct ttcccgcgtc agcagttgat tgccaatcct aaaaattgct ttgacgttgt
      241 cattgctgag attgacgtta ctcacctttc tgtcacttgg tatgattttg aagctgaaga
      301 gtatgctgag tgtgattccg gcactatgga gcttgttgtt tctcaggtaa attctggcga
      361 ggttattcgc tcatctgaag acctgtttgt tgatgttgat gatatggaat ggccttatga
      421 aattgcggag taagtcatgg aaactgttat cggaaaattt attgctctgg ctattgttgc
      481 tcttatgctg tatggaattg cctgtttgat tcggaggttt ccgtgaaata ttttagtttg
      541 gtagatgaac attatgctta ctgccctgat acaaggattt tgcacattac tcgtagtcgt
      601 gtttctgacc ctcggtatga gcgtcgcttt cttactgatg aggagcattt tgcacttttg
      661 gattggttaa aaaatcgccc aacttacatt aattcttgac agacctttaa aataccctct
      721 atattgccct catagtttca ctacgagggc tttttcgcat ggctactgaa atcttctctg
      781 atgttgttaa gtctgtttgg tcgcacgcta cggctaagca tgctcatctt cgtatggctg
      841 ttcaggttga taatcgtagt cgcctccttt ctgacctcgt ttatcagttg gaaaaacgcc
      901 tttctgaaga gactcatttg gatgatgaga ctcttgccat ttatgaatct cagactgccc
      961 ttctggaaga ccatatggca ctggttcgga agtgtgctgc ccaacttgat aatagtaaca
     1021 ctatagacca ccgtacccct ttggatgccg aatgtgtttt cctgtttgaa atgatttgcc
     1081 cgggtgttcg ctacggtaaa acgttaaatt ctctttggac taagtatgtt gttcaatggc
     1141 ctgagaagtt aatccgtcag gagttagaca tggttaagcc tttatccttt aaggatgagg
     1201 ttgccaagta catggagaag atgcaggaaa aaacacgcaa aaatcgcatg actcagaaag
     1261 ttattaatga gatgcgtatt gctcaccaaa aaggctggtt cttcgtattt gatacgttaa
     1321 cccttgctga tgaccgtttg caggctttta atgaaaaccc caatgctctt cgtgattatt
     1381 tcaggactgt tggtcgagct gttctgcgcg ctgaaggtcg ttcggtcaag gattcctaca
     1441 acgactgcta tcgctatctt tgtgtgccgg agtttggagg tcagcacggc cgtcttcatt
     1501 ggcacgttgt gcatatggtg cggactcttc ctttgggaag tcatgaccct aatttcggtc
     1561 gcaaggtacg taattatcgc cagattaact cgttccgtgg catgtggcct tatggcttca
     1621 cgcaaccgat agctgttcgc tatcaacatg acgcttattc ccgcaaaggt tggctgtggc
     1681 ctgttgacaa aacaggaaaa gcaatgcaga gtaagccgta tcaggcggtc gcatggtatg
     1741 tgaccaagta tgtagccaag caatctgacc agcgtcagaa agctattacc gagagacaaa
     1801 agaaatgcaa gaatccatta atggcaatct gtctgaagaa agaatttcgg gtacgcagca
     1861 gtcggaaact cggaatggag ctcccgtcaa tggctcatct gagcaacaag gtacttctgg
     1921 aactgagccg aatcagcttc gattccagtc ctctgtatca gatagtgaaa gagaacgcca
     1981 aaaagcaatt gaccttgaac atcggcgcgc tgcctttgca cgtcattttg gatgtgcgcc
     2041 cggaagtgag aagcatgttg aaaactattc gtcgtttgat gaaaaagaca cccgagttca
     2101 attggcagag ttctatcgct tcaatgacgg tcactttaaa aaatggggat atttctgatg
     2161 aagcacgtca atacattatt gatgcaggaa ttacgcctac tgatttgcga gctaaagcga
     2221 ctcagacttt cggcggtaag tgacccggat ttttctcagg agaaaattca tgctgagctc
     2281 gactcgctac tatgcaagtt atcgcgccac tttgactaag cagttgatgt ttcttacaaa
     2341 agctgacttt accaatgatg atgagaaatg gcttaatgcc tttggtaatc ttctccgtca
     2401 gtggtttcag attgaagact ggaaaggcaa tcataaaaaa ttgcttgacg atctgaaaaa
     2461 acgtgattat ctttgacccg aatcttacat aaggagttac ctatgaatat tgtttctgat
     2521 gttaattacg ctacttccgt tgctgctctt cgcatgttgc aggctagtgc tgttttggat
     2581 gttactgagg aagatttcga ttttctgact ggtgataaga tttggattgc taccgaccgt
     2641 aaccgtgcgc gtcgttgtgt tgaggcttgt gtttatggaa cgctggactt tgttggatat
     2701 cctcgctttc ctgctcctgt tgagtttatt gctgccgtca ttgcttatta tgttcatccc
     2761 gtcaatgtac aaacagcatg cctcgttatg gaaggcgcgg agtttagcga aaacattatc
     2821 aatggcgtcg agcgcccggt taacgccgct gagctcttcg cgtacaccct gcgtattaaa
     2881 gcaggattca aagaaactgt aatggatgcc gaggaaaatg ctcgtcagaa attacgcgca
     2941 aatggactga agtgatatga agaaagcacg tcgttctcct agtcgtcgta aaggtgctcg
     3001 cctctggtat gtaggcggtt ctcagtttta attatgggcc cttcggggcc ttttaaggaa
     3061 attcaaatgt ctaatgtaca aacttccgct gaacgtgaaa ttgttgacct ctctcatctt
     3121 gcctttgact gtggcatgct tggtcgtctg aagactgttt catggactcc tgttatcgct
     3181 ggcgattcct ttgagcttga tgctgttggt gctttgcgtc tttcccctct gcgtcgtggt
     3241 ttagctattg attctaaggt tgattttttc accttctaca ttccgcatcg tcatgtttat
     3301 ggcgaccagt ggattcagtt tatgcgtgat ggtgttaatg ctcagcctct gccttctgtt
     3361 acttgcaatc gctatccgga ccatgctggt tatgtaggta ctattgttcc tgcaaataac
     3421 cgtattccta agtttttgca tcagagctat ctgaacattt acaataacta tttccgtgcc
     3481 ccgtggatgc ctgagcgtac cgaggccaac ccgtctaatc ttaatgagga tgatgctcgt
     3541 tatcgcttcc gttgctgcca ccttaaaaat atttggtctg ctccgctgcc tccggaaacc
     3601 aaattggctg aagaaatggg tattgaaagc aattccattg atattatggg tttgcaagcc
     3661 gcttatgcgc agcttcacac tgagcaggag cgtacttact ttatgcagcg ttaccgtgat
     3721 gttatctcca gctttggcgg ttcaacctcc tatgatgccg ataaccgacc gttgcttgtt
     3781 atgcacaccg acttctgggc ttccggttac gacgttgacg gtaccgacca atcttccctt
     3841 ggacaattct ctggtcgagt ccagcagacg tttaaacact cagtgccgcg attcttcgtg
     3901 cctgagcatg gtgtcatgat gactttggct ctgattcgct tcccgcctat cagtccgttg
     3961 gagcaccatt atcttgctgg taagtctcag ttaacctata ccgaccttgc tggcgacccg
     4021 gctctgattg gtaacttgcc tcctcgcgag attagttatc gagatctgtt ccgtgatggt
     4081 cgttctggta ttaagattaa agttgccgag tctatttggt atcgtactca tcctgattac
     4141 gttaacttta agtatcatga tttgcatgga ttcccgttcc ttgatgatgc gcctggtaca
     4201 tctactggtg ataatcttca ggaagctatc cttgttcgtc atcaggacta tgatgcttgc
     4261 ttccagtctc agcagttgct acagtggaac aaacaggctc gctataacgt tagtgtttat
     4321 cgccatatgc ctactgtacg tgattccatt atgacctctt aattcatggg ccttcgggcc
     4381 tttaaggatt tatctatgta tcagaatttt gtcactaagc atgatactgc cattcagact
     4441 tcccgttttt ctgttactgg caatgttatt cctgctgctc ctactggtaa tattcctgtc
     4501 atcaatggtg gtagtattac cgctgagcgt gctgttgtta atctttacgc taatatgaat
     4561 gttagcactt cttctgatgg ttctttcatt gttgctatga aggttgatac ttctccgact
     4621 gaccctaatt gtgtcatctc tgctggtgtt aaccttagtt ttgctggtac ctcatacccg
     4681 attgttggta ttgttcgttt tgagtctgct tctgaacagc ctacttctat tgctggtagt
     4741 gaagttgagc attacccaat tgaaatgtct gttggttctg gtggtgtttg ttctgctcgc
     4801 gattgtgcta ctgttgatat tcatcctcgt acttctggta ataatgtttt tgttggtgtg
     4861 atttgttcta gcgctaaatg gacctccggt cgtgtgattg gtaccatcgc tacgactcag
     4921 gttattcatg aataccaagt ccttcagccg cttaaataaa aggctgccgc actcccggtt
     4981 agatgcctgc ccagtgtagg gcagaccgag ccgtacggag atacccgata aactaggaac
     5041 gtggaaggcg ttagccgcct tccctcctgc taagcccaaa aaggagttac agcgatgtta
     5101 ggtgccgttg ttggtggcat tgcctcagcc ttagctagtg gtgccgcttc gaaattattt
     5161 ggaggctctc agcgtggagt ttctgttatg cagcaaggtg ccgagtctgc cggattgact
     5221 aacggcggcg gcgccatttc tatggataat gaccaaggta ttcagtctgc tattcaaggc
     5281 tcgaatgttc ctcctgctgg tcagcttcct gagtctcaga actctggtgt tatggctgat
     5341 gctggtaaca tgcttcgtaa tgctggaaag tctttgcttg acggaactat tcaggctggt
     5401 tctgataaag ttaagcaagc acttattgat aagttgattg gaggtaatga tgctaaagac
     5461 cgaggaaagg caacccgcga ttacttggct gcggccttcc ctgagctcaa cccatgggaa
     5521 cgtgctggag ctggtgcttc cactgccggg ttagaatctt ctgctcagaa tcagcagaaa
     5581 gagatgctga agatgcaatt ggataatcag aaagatattg caaaaatgca gatggataac
     5641 aatttgcaga ttgctggtat tcagtctgcc acttctcgtc aaaatacgaa ggattctgtt
     5701 tatgcccaga atgagatgct tcagtataat caacgtgagt cgcaggcacg cgttgcgtct
     5761 atcctcgcca acactgacct cacgactaaa caggctaccc atgaaatcat gaggatggcc
     5821 cttacccgtg ctcaggagac tggtcagcat ttgactaact ctcagattat ggctttggag
     5881 aaaaaggtct atgcagaaat tggaaaaatt catcaagata ctcaaaactc tcgctatggt
     5941 agctctcaag ttactgccgc tgcgaaagat gttacgaata tgattaccga tgccgcttca
     6001 ggtgcttctg attgggtttc tcagcagtgg aattcgttct ttaaggatgg taagtccaac
     6061 ggtatttccc ttaataccag aaaataa
//