From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Sciara coprophila retrotransposable element R1 reverse
Date: 4 Sep 92 10:07:05 GMT
Distribution: bionet
Checksum: 45939     7

LOCUS       SCIRTRANSA   3550 bp ds-DNA             INV       04-SEP-1992
DEFINITION  Sciara coprophila retrotransposable element R1 reverse
            transcriptase gene, 3' end.
ACCESSION   L00945
KEYWORDS    retrotransposable element R1; reverse transcriptase.
SOURCE      Sciara coprophila (library: Charon 4A (from A. Kerrebrock)) DNA.
  ORGANISM  Sciara coprophila
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Diptera; Nematocera;
            Bibionoidea; Sciaridae.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Burke,W.D., Eickbush,D.G., Xiong,Y., Jakubczak,J.L. and
            Eickbush,T.H.
  TITLE     Sequence relationship of retrotransposable elements R1 and R2
            within and between divergent insect species
  JOURNAL   Mol. Biol. Evol. (1993) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <1..3015
                     /product="reverse transcriptase"
                     /codon_start=1
                     /translation="LRGEVRGLPSSFRVVTSRIVNDGIGISAIVINDPEADVLVIEDC
                     TDEYGVCVLIKGATCSMYVVSVYCRFGTALGPYLQYMENVRVKCGNTYMIMGMDANAV
                     SPLWFSKGENLGRGRLNEANGLLLEEWILEGRMIVINEPSEWYTFSGPNGSSDIDVTL
                     VNEAGGRFGYEWSVQPEWGVSDHNLIRIRVSLDGLVADASPSPQSARWQTRDTDWGEY
                     MGDVKAKADVFGLAQYENVSVDEKVDLLTEWIYGANDWNMRRHTAVRTFQNEWWSVEL
                     AEKRSELRRRRHAFQRIRNAGAASLADRLQAFRDCKIEYKRMLCEAKLRCWQEFVASE
                     SNENPWGRVFKLCRGRRKPVDVCSVKVDGVYTDTWEGSVNAMMNVFFPASIDDASEID
                     RLKAIARPLPPDLEMDEVSDSVRRCKVRKSPGPDGIVGEMVRAVWGAIPEYMFCLYKQ
                     CLLESYFPQKWKIASLVILLKLLDRIRSDPGSYRPICLLDNLGKVLEGIMVKRLDQKL
                     MDVEVSPYQFAFTYGKSTEDAWRCVQRHVECSEMKYVIGLNIDFQGAFDNLGWLSMLL
                     KLDEAQSNEFGLWMSYFGGRKVYYVGKTGIVRKDVTRGCPQGSKSGPAMWKLVMNELL
                     LALVAAGFFIVAFADDGTIVIGANSRSALEELGTRCLQLCHEWGKRVCVPVSAGKTTC
                     ILMKGHLSANRPPCIRLNGTSISYKSEVKHLGIFVAERMNFRPHFVYLRGKILGLVGC
                     LRRVMRKSWGLGRRATCILYKGLFVACMSYGASVWFRTLRFSYASILLNRCQRLVLYA
                     SLNVCRTVSTERMQVLHGELPWDLEATRRGLLSEFRKGITPVDGDPITDEEMLGLSGS
                     QFKELLMERLLDVWQGRWDVSEKGRLTHEFIPSVRFVRENEWMAFGLCLGYVLTGHGS
                     MNGFLHKRGLSNTPVCMCGAPNEDVKHLLGECPLYEDLRDLNGCGLLIRNGSLDVSGA
                     LSEIGAFEKLNQFAVSLFGRRSRLMRGMRIRE"
     3'UTR           3016..3550
BASE COUNT      788 a    679 c   1128 g    955 t
ORIGIN
        1 ttgcgtgggg aggtaagggg actgccgtct agcttcaggg tggttactag tagaatagtt
       61 aacgatggta ttggaatcag tgcgattgtg ataaacgacc ctgaagctga tgtgcttgtc
      121 attgaggact gtaccgatga gtacggtgtg tgtgtgttga tcaaaggtgc cacatgtagc
      181 atgtacgttg tgtccgtgta ttgtagattt ggtactgccc taggaccata tctgcaatac
      241 atggaaaatg tgcgtgtgaa gtgtggtaat acctatatga tcatggggat ggacgcaaat
      301 gccgtttccc ccctctggtt cagtaagggt gagaacttgg gaaggggaag gctgaatgaa
      361 gcgaatggtc tgctgctcga ggaatggata ctcgaaggca gaatgattgt tatcaatgaa
      421 ccctcggagt ggtacacgtt tagtgggccg aatggctcta gcgacattga cgtgacactg
      481 gtaaacgaag ctggcggtag gttcgggtat gagtggtctg tgcagcctga atggggtgtt
      541 agtgaccata atctgatccg tattcgagtt agcttggacg gactagtggc tgatgcttct
      601 ccatcaccac agtctgccag gtggcagacc cgtgatacgg attggggtga atacatggga
      661 gatgtgaaag ctaaagcaga tgtgtttggc ctggcgcaat atgaaaacgt gagtgtcgat
      721 gagaaggtcg acttactcac agagtggata tacggtgcga acgactggaa catgcggagg
      781 cataccgcgg tgcgaacttt ccagaatgag tggtggtctg tcgaacttgc ggagaagagg
      841 agtgagctgc gacggcgcag gcatgccttt caacgcattc gtaatgcggg tgccgcaagt
      901 ctggcagatc ggctacaggc gtttagggat tgtaagattg agtacaagcg catgttgtgt
      961 gaagccaagc ttcggtgctg gcaggagttt gtggctagcg aatccaatga aaacccctgg
     1021 ggacgagttt ttaagctctg tcggggtagg aggaagcctg tcgatgtctg tagcgttaaa
     1081 gtcgacggtg tgtatactga tacgtgggag ggtagtgtaa atgcgatgat gaacgttttc
     1141 tttcctgcct cgatcgatga tgcgagtgag attgaccggc tgaaggcgat tgccagaccc
     1201 ttaccacctg atctggagat ggatgaagta tccgactccg tgagaaggtg taaggtgagg
     1261 aaaagcccgg ggccggatgg gattgtggga gagatggttc gtgctgtctg gggggcaatc
     1321 ccggaatata tgttctgtct gtacaagcag tgcttgctgg agagttactt tccgcagaaa
     1381 tggaaaatag cgagcttggt catcttactc aagctcttgg accggataag atctgaccca
     1441 ggctcctatc gacctatctg tttgttagat aacttgggca aggtgcttga gggtataatg
     1501 gttaagaggc tggatcaaaa gttgatggat gtggaggttt caccgtatca gttcgcgttc
     1561 acttacggca agtctactga agatgcatgg agatgcgttc agcggcatgt tgaatgctcg
     1621 gagatgaagt acgttattgg gctgaatatc gactttcaag gtgcgtttga caatcttggc
     1681 tggctttcca tgcttctgaa gttagatgag gctcagagta atgagtttgg tttgtggatg
     1741 agttactttg gtggtcgtaa ggtctactat gttggtaaga ctggcatcgt tcggaaagat
     1801 gtgactcgtg ggtgtcctca gggatctaag agtggaccgg cgatgtggaa gcttgtaatg
     1861 aatgaactct tgctggcact cgtggcagct ggattcttca ttgtagcttt tgccgacgac
     1921 ggtaccattg ttattggggc taatagtcga tcggcgttgg aggagctggg cacgcggtgc
     1981 ttgcagttgt gtcatgagtg ggggaagagg gtgtgtgttc cggtgtcggc gggcaagaca
     2041 acgtgtatcc ttatgaaggg tcacttgtcg gccaaccggc ctccgtgcat acggctgaac
     2101 ggcacctcca tctcctacaa gagtgaggtg aagcacctgg gaatcttcgt tgctgagcgt
     2161 atgaatttta ggccgcactt cgtttacctc cggggtaaga ttcttggtct tgttgggtgt
     2221 ttgcgtcgtg tgatgaggaa gtcgtggggc ctggggcgta gggcaacttg tattctgtac
     2281 aaggggctct tcgtggcgtg tatgtcgtat ggtgcaagcg tgtggttccg gactctgcgc
     2341 ttttcgtatg cgtctatctt gctgaataga tgtcaaaggc tagtcctgta tgcatctcta
     2401 aacgtgtgtc ggacggtttc cacagagcga atgcaagttc tccacggaga actaccatgg
     2461 gatttggagg caacccgtag aggcttactc tccgaattcc gtaaaggcat tacgccggtg
     2521 gatggcgatc cgatcacgga tgaagagatg ctagggttga gtggttctca gttcaaggaa
     2581 ctgttgatgg agaggttgct ggatgtgtgg cagggcaggt gggatgtctc ggaaaaggga
     2641 cgcctcactc atgagtttat tccgagtgtc cgatttgttc gtgagaatga gtggatggcc
     2701 tttggactgt gtcttggtta tgtattaacg ggacacggta gcatgaatgg ttttctgcac
     2761 aaacgtggtc tgtcaaatac gccggtatgc atgtgtggag cacctaacga ggacgtcaag
     2821 cacctactcg gggagtgccc gctctacgag gatcttcgtg atctgaatgg ttgtgggtta
     2881 ctcattcgta acggatcgct tgacgttagc ggggcactca gcgagattgg agcgtttgaa
     2941 aagttgaatc agtttgcggt atcgctattc ggcaggaggt cgaggttgat gagagggatg
     3001 aggatccgtg aatgatgcat gtgtacgccg ttatgtcttg aatgtggttg attgtgggga
     3061 gaatgaccgg cgcaggatga gttcagctgg ttgaacggct aaggccaatt ccagactgtc
     3121 tctcggagag tgcggactcc gcgcaattcg agctagtcga tcggagctgg aagttcatgc
     3181 ttccatccga agtggtcttc gataccacct accctacccg agggttaaat cggtaccacg
     3241 ggtgttggga gcccaccagg attgcactat cctcctggtc ccaactatgg ttgaggagcc
     3301 tatccttggc tgaaacgtgg tggctgtggt tcaagtgcgt ttaatacgct ggggtactgc
     3361 tcccgggtga attgcagtaa gggttgtgat aggcccttgc cctcctttgg ctatctggtg
     3421 catgaaacac cggcatataa aggtagtcat ttgacgcgct gattgagcgt atctcaatct
     3481 gctcctctta gagaggacga gatgttatgc cttcgggtgg gtaattctcg ttaatataaa
     3541 gatattattc
//