From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Influenza B/South Dakota/5/89 hemagglutinin (HA) gene (segment 4,
Date: 3 Jan 93 22:05:44 GMT
Distribution: bionet
Checksum: 48718 3

LOCUS       FLBHAZH      1080 bp ss-RNA             VRL       21-DEC-1992
DEFINITION  Influenza B/South Dakota/5/89 hemagglutinin (HA) gene (segment 4,
            HA1 domain), 5' end.
ACCESSION   M65172
KEYWORDS    hemagglutinin; receptor-binding protein; transmembrane protein.
SOURCE      Influenza virus type B (individual_isolate B/South Dakota/5/89)
            RNA.
  ORGANISM  Influenza virus type B
            Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses;
            Orthomyxoviridae; Influenzavirus.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Rota,P.A., Hemphill,M., Whistler,T., Regnery,H.L. and Kendal,A.
  TITLE     Antigenic and genetic characterization of the haemagglutinins of
            recent cocirculating strains of influenza B virus
  JOURNAL   J. Gen. Virol. 73, 2737-2742 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..>1080
                     /gene="HA"
                     /note="HA1/HA2 cleavage site is at position 1080"
                     /product="hemagglutinin"
                     /codon_start=1
                     /translation="MKAIIVLLMVVTSNADRICTGITSSNSPHVVKTATQGEVNVTGV
                     IPLTTTPTKSHFANLKGTKTRGKLCPNCLNCTDLDVALARPMCIGTIPSAKASILHEV
                     RPVTSGCFPIMHDRTKIRQLPNLLRGYENIRLSTHNVINAERAPGGPYRLGTSGSCPN
                     VTSRSGFFATMAWAVPRDNKTATNPLTVEVPYICTKGEDQITVWGFHSDSKTQMKKLY
                     GDSNPQKFTSSANGVTTHYVSQIGGFPNQTEDGGLPQSGRIVVDYMVQKPGKTGTIVY
                     QRGVLLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGLNKSKPYYTGEHAKAIGNC
                     PIWVKTPLKLANGTKYRPPAKLLKER"
BASE COUNT      380 a    240 c    226 g    234 t
ORIGIN      
        1 atgaaggcaa taattgtact actcatggta gtaacatcca acgcagatcg aatctgcact
       61 gggataacat cttcaaactc acctcatgtg gtcaaaacag ctactcaagg ggaagtcaat
      121 gtgactggtg tgataccact gacaacaaca ccaacaaaat ctcattttgc aaatctcaaa
      181 ggaacaaaga ccagagggaa actatgccca aactgtctca actgcacaga tctggatgtg
      241 gccttggcga gaccaatgtg tatagggacc ataccttcgg caaaagcttc aatactccac
      301 gaagtcagac ctgttacatc cgggtgcttt cctataatgc acgacagaac aaaaattaga
      361 cagctaccca atcttctcag aggatatgaa aatatcagat tatcaaccca taacgttatc
      421 aacgcagaaa gggcaccagg aggaccctac agacttggaa cctcaggatc ttgccctaat
      481 gttaccagta gaagcggatt cttcgcaaca atggcttggg ctgtcccaag ggacaacaaa
      541 acagcaacga acccactaac agtagaagta ccatacattt gtacaaaagg agaagaccaa
      601 attactgttt gggggttcca ttctgatagc aaaacccaaa tgaaaaaact ctatggagac
      661 tcaaatcctc aaaagttcac ctcatctgcc aatggagtaa ccacacatta tgtttctcag
      721 attggtggct tcccaaatca aacagaagac ggagggctac cacaaagcgg cagaattgtt
      781 gttgattaca tggtgcaaaa acctgggaaa acaggaacaa ttgtctatca aagaggtgtt
      841 ttgttgcctc aaaaggtgtg gtgtgcaagt ggcaggagca aggtaataaa agggtccttg
      901 cctttaattg gtgaagcaga ttgccttcac gaaaaatacg gtggattaaa caaaagcaag
      961 ccttactaca caggagaaca tgcaaaagcc ataggaaatt gcccaatatg ggtgaaaaca
     1021 cctttgaagc ttgccaatgg aaccaaatat agacctcccg caaaactatt aaaggaaagg
//