From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Xenopus laevis rhodopsin mRNA, complete cds.
Date: 31 Dec 92 01:41:32 GMT
Distribution: bionet
Checksum: 13630 4

LOCUS       XELRHODOP    1684 bp ss-mRNA            VRT       17-DEC-1992
DEFINITION  Xenopus laevis rhodopsin mRNA, complete cds.
ACCESSION   L07770
KEYWORDS    G protein-coupled receptor; phototransduction protein;
            retinal protein; rhodopsin; transmembrane protein.
SOURCE      Xenopus laevis (library: lambda-ZAPII) adult retina cDNA to mRNA.
  ORGANISM  Xenopus laevis
            Eukaryota; Animalia; Chorqata; Vertebrata; Amphibia; Lissamphibia;
            Anura; Archeobatrachia; Pipoidea; Pipidae; Xenopodinae.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Knox,B.E., Scalzetti,L.C., Batni,S. and Wang,J.Q.
  TITLE     Molecular cloning of the abundant rod opsin and transducin from
            Xenopus laevis
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    189..1684
                     /note="sequenced from clone pXOP71"
     misc_feature    325..1507
                     /note="sequenced from clone pXga1"
     variation       1224
                     /note="clone pX0P5 contained deletion from bp 1224-1534"
     CDS             110..1174
                     /product="rhodopsin"
                     /codon_start=1
                     /translation="MNGTEGPNFYVPMSNKTGVVRSPFDYPQYYLAEPWQYSALAAYM
                     FLLILLGLPINFMTLFVTIQHKKLRTPLNYILLNLVFANHFMVLCGFTVTMYTSMHGY
                     FIFGQTGCYIEGFFATLGGEVALWSLVVLAVERYMVVCKPMANFRFGENHAIMGVAFT
                     WIMALSCAAPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFIVHFTIPLIV
                     IFFCYGRLLCTVKEAAAQQQESATTQKAEKEVTRMVVIMVVFFLICWVPYAYVAFYIF
                     THQGSNFGPVFMTVPAFFAKSSAIYNPVIYIVLNKQFRNCLITTLCCGKNPFGDEDGS
                     SAATSKTEASSVSSSQVSPA"
BASE COUNT      426 a    431 c    339 g    488 t
ORIGIN      
        1 ggtagaacag cttcagttgg gatcacaggc ttctagggat cctttgggca aaaaagaaac
       61 acagaaggca ttctttctat acaagaaagg actttataga gctgctacca tgaacggaac
      121 agaaggtcca aatttttatg tccccatgtc caacaaaact ggggtggtac gaagcccatt
      181 cgattaccct cagtattact tagcagagcc atggcaatat tcagcactgg ctgcttacat
      241 gttcctgctc atcctgcttg ggttaccaat caacttcatg accttgtttg ttaccatcca
      301 gcacaagaaa ctcagaacac ccctaaacta catcctgctg aacctggtat ttgccaatca
      361 cttcatggtc ctgtgtgggt tcacggtgac aatgtacacc tcaatgcacg gctacttcat
      421 ctttggccaa actggttgct acattgaagg cttctttgct acacttggtg gtgaagtggc
      481 cctctggtca ctggtagtat tggccgttga aagatatatg gtggtctgca agcccatggc
      541 caacttccga ttcggggaga accatgctat tatgggtgta gccttcacat ggatcatggc
      601 tttgtcttgt gctgctcctc ctctcttcgg atggtccaga tacatcccag agggaatgca
      661 atgctcatgc ggagtagact actacacact gaagcctgag gtcaacaatg aatcctttgt
      721 tatctacatg ttcattgtcc acttcaccat tcccctgatt gtcatcttct tctgctatgg
      781 tcgcctgctc tgcactgtca aagaggctgc agcccagcaa caggaatctg ctaccaccca
      841 gaaggctgag aaagaggtca ccagaatggt tgttatcatg gtcgttttct tcctgatctg
      901 ttgggtgccc tatgcctatg tggcattcta catcttcacc caccagggct ctaactttgg
      961 cccagtcttc atgaccgtcc cagctttctt tgccaagagc tctgctatct acaatcctgt
     1021 catctacatt gtcttgaaca aacagttccg taactgcttg atcaccaccc tgtgctgtgg
     1081 aaagaatcca ttcggtgatg aagatggctc ctctgcagcc acctccaaga cagaagcttc
     1141 ttctgtctct tccagccagg tgtctcctgc ataagagctt caccagggct gtctcagggt
     1201 ccgctgcctc acacaattcc catcacttaa gccctgtcta cttgttgcga aggcaaagaa
     1261 ttccacagtt ttaatattta cccccattct gcccaacctt ggacactgta agagctgacc
     1321 ccattactgc tgggaaggcc caagctttgt tgcattctga tgtgatcctt tcagcagaaa
     1381 atgggtggat tcaatgaatt tcaccaaggc tgtacataac aataacatta gtctgaaggc
     1441 acctcccacc cagagaatgc aacacttatt tatctctgtc ttttcttgac atattgatgc
     1501 tgcttctatt catggtcact aacaaaaagt cccattttac aatgcaactg aaagtaatgt
     1561 atttttgtaa tataataaca tatttcatgc aatctcctct gcttattggc aaggtctgat
     1621 atagtgagga tagacagcca gaccccttgc attaaaatcc tgtattaaaa atttctttgc
     1681 aagt
//