From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rhizobium tropici nodulation protein D (nodD1) gene, complete cds.
Date: 21 Dec 92 20:51:58 GMT
Distribution: bionet
Checksum: 21769 4

LOCUS       RHMNODD1X    1122 bp ds-DNA             BCT       20-NOV-1992
DEFINITION  Rhizobium tropici nodulation protein D (nodD1) gene, complete cds.
ACCESSION   L01273
KEYWORDS    nodD gene; nodulation protein D; regulatory protein.
SOURCE      Rhizobium tropici (strain CIAT899) DNA.
  ORGANISM  Rhizobium tropici
            Prokaryotae; Gracilicutes; Scotobacteria; Rhizobiaceae.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   van Rhijn,P.J., Feys,B. and Vanderleyden,J.
  TITLE     Multiple copies of nodD in Rhizobium tropici strains CIAT899 and
            BR816
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_signal     85..133
                     /function="NodD binding site"
                     /standard_name="nod box"
                     /note="putative"
                     /citation=[1]
     misc_binding    203..268
                     /function="transcription regulation"
                     /bound_moiety="helix-turn-helix DNA binding"
                     /note="putative"
                     /citation=[1]
     CDS             143..1069
                     /function="regulatory protein"
                     /gene="nodD1"
                     /note="putative"
                     /citation=[1]
                     /product="nodulation protein D"
                     /codon_start=1
                     /translation="MRFKGLDLNLLVALDALMTERNLTAAARSINLSQPAMSAAVGRL
                     RVYFEDELFTMNGRELVLTPRAKGLVSAVREALLHIQLSIISWEPFDPFQSDRRFRII
                     LSDFLTLVFMEKVVKRRAREAPGVSFEFLPLADDYDELLRRGEVDFIILPDVFMPTGH
                     PRAKLFEERLVCVGCGRNQELSQPLTFDRYMSMGHVAAKFGNSRRPSIEEWYLLEHGF
                     KRRIEVVVQGFSMILPVLSNTNRIATVPLRLAQHFAEVLPLRIMDLPLPLPPFTEAVQ
                     WPALQNSDPASLWMRGILLQEASRLALPSAEH"
BASE COUNT      244 a    305 c    291 g    282 t
ORIGIN      
        1 atcgataagc ttacgccgat gtactcgtct gctaatcgac atacttgtca ggttatcgac
       61 attttcctca tgcaccatca tgccgaatcg gtaaaattga ttgtttggat ggcaaccatc
      121 cacatcttga atgaaggaaa agatgcgctt caaaggactg gacttaaatc ttctcgtcgc
      181 gctcgacgca ttgatgaccg agcgtaacct gacggccgcg gcacgcagca tcaatctcag
      241 ccagcctgcg atgagcgctg ctgtgggccg attgcgtgtc tatttcgagg atgaactgtt
      301 tacgatgaat ggtcgcgaac ttgtcctgac gccgcgtgcg aagggccttg tttcggccgt
      361 acgtgaagcc ttactccata tccagctttc gatcatttcc tgggagccgt ttgatccctt
      421 tcagtcggat cgccgtttca ggatcattct ttccgatttc ctcacactcg tgtttatgga
      481 aaaggtcgtg aagcgtcgtg cgcgggaagc cccaggcgtg agcttcgaat tcctgcccct
      541 cgccgatgat tacgacgagc ttttgcgccg tggcgaagtc gattttatca ttctcccgga
      601 cgtgttcatg ccaactggac atcctcgagc gaaactgttt gaggaaaggc tcgtatgcgt
      661 gggctgtggc aggaaccaag agctatcaca gccgcttaca ttcgacagat acatgtccat
      721 ggggcacgtc gcggccaaat tcgggaattc acgaagacca tcaatcgaag aatggtattt
      781 gctcgaacac ggttttaaga gacgtatcga ggtcgtcgtg cagggcttca gcatgatcct
      841 gcccgttctg tccaatacca atcgcatagc gaccgtgccg ttgcgactgg cgcaacattt
      901 cgcagaagtt ttgccccttc ggatcatgga ccttccactg ccgcttcccc cattcacaga
      961 ggccgttcaa tggcctgcgc ttcaaaacag tgatccggcg agcctatgga tgcgcgggat
     1021 tttattacag gaagcatcgc gccttgccct cccgtcggca gagcattgag tggatgccag
     1081 caatgttgct ggagcccatc tcatgcggat actcgcaaga tc
//