From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Drosophila melanogaster CCATT box encoding transmembrane domain.
Date: 10 Sep 92 10:31:44 GMT
Distribution: bionet
Checksum: 63344     9

LOCUS       DROCCAAT     5307 bp ds-DNA             INV       10-SEP-1992
DEFINITION  Drosophila melanogaster CCATT box encoding transmembrane domain.
ACCESSION   M96581
KEYWORDS    iron-sulfur center; transmembrane domain.
SOURCE      Drosophila melanogaster (strain Canton S) DNA.
  ORGANISM  Drosophila melanogaster
            Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
            Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
            Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE   1  (bases 1 to 5307)
  AUTHORS   Ross,J.L.
  TITLE     Characterisation of the alpha-glycerol-3-phosphate oxidase
            gene-enzyme system of Drosophila melanogaster
  JOURNAL   Thesis (1991) Molecular Biology, Vanderbilt University
  STANDARD  simple staff_entry
REFERENCE   2  (bases 1 to 5307)
  AUTHORS   Ross,J.L., McKechnie,S.W., Davis,M.B. and MacIntyre,R.J.
  TITLE     Nucleotide sequence of the glycerol-3-phosphate oxidase gene of
            Drosophila melanogaster
  JOURNAL   Unpublished (1992)
  STANDARD  simple staff_entry
FEATURES             Location/Qualifiers
     CAAT_signal     475..481
                     /note="A second candidate for a CCAAT box occurs between
                     424 - 432"
                     /note="putative"
     TATA_signal     679..685
                     /note="putative"
     misc_signal     716..722
                     /function="CAP site"
                     /note="putative"
     misc_feature    2648..2737
                     /note="transmembrane protein"
                     /note="putative"
     intron          3131..3509
     intron          4543..4605
     misc_feature    4605..4667
                     /note="iron-sulphur center"
     allele          4978
                     /standard_name="Tahbilk CA7"
                     /note="this same allele differs from the Canton S sequence
                     also at position 5235 (T replaces the C) and position 5271
                     (T replaces the A)."
                     /note="'a' in allele"
     polyA_signal    5123..5128
BASE COUNT     1447 a   1288 c   1180 g   1392 t
ORIGIN
        1 gtacttccaa tcatgcagag attggcgtat ttataattcg gtaccaccgc aactagagcg
       61 gatacagtac caaatacata atatgaaacc tatgctaatc cagataaata tcataagtaa
      121 tcaagctcaa caacgagaaa cactcgacat tcggctgtct tcgacgtaac tacatgcact
      181 ctactaaccg aagcgccacc aacgctacga tccgctcagc tcagctccgc ttcatcgcca
      241 caagtacttc gaacttcgaa cagcagcaac accacatcta cgtgccatgc cggcagctca
      301 agactatggc cgcaagctac gtgtaaggcc gcaccttccc atacacatct aactctctgt
      361 ctgcatactc gcattttgac ccgcccgaaa gagcatcgcc tgcctatccg tatagcatgt
      421 agaccgcaat ctgcgagagc cacactcgac gatataccac cacactacgc gacgcccaat
      481 tggccatcga cgataatcaa aatttgaact atgttgctgc tgctgttgct gcgccaccac
      541 tgaacgacat aatgcgcgaa tcctacgaat ccatcactcg cttgcccaca tcatccatta
      601 atgctccctt tgaccttctc ttcctgttaa taaattttac ttgtgttcga attggcctgt
      661 gtacgaatga ttattatgta taccttttgt tttgtattgt gccttattct aattaatcgt
      721 ttctgttaat taatgaacat ttgtttctgc tccgccagca gcatacatcc acatccctat
      781 gccgccaatc cgaggccgcc aacaacgtgc cgtaaaacat tatcacacgg aggacgaagc
      841 ggccagctcc tacaaggcgg tcaagcgcgg caagaagaag tagtagaagc gtgatcatca
      901 tctgtatgcc aacatcttcc gcatcgcaca ctcaaaaaca ctaggaagca aagcgttggg
      961 ttctgttcca tagcaggaaa accaattcaa atatttttta acaaacacaa ttctttacca
     1021 gttctgtctt atcctgcgtg agtcgacaag aatgcaacac taaaaaatgt acaacttcaa
     1081 gatgctattg atgtgcacgc aggatacaga accaacttgc ttaaatttac ttaaaacaaa
     1141 tgtgactatt caacgccgaa atcattacaa cacacactct cagacctaat cgaaaaattc
     1201 aatgaaagta atggaatata tatgaaatcg taattataag tttgaattat ttgattaatt
     1261 ctcaagtttt tagattttgt tagccactaa gctttaaatt atggatgcca gttagcgtgc
     1321 aaatgaacac aattgatttg aaggctccga acgatagaaa acaacaatta ccaattcccc
     1381 aaatacatgt aattcgtaag gcctaagtaa atgttaacgt gaatttaatt aaatggtaat
     1441 tacattataa tagtaaatcc agtgttctac ttatgcgact tatagagaat taaacgtatt
     1501 aactaactag tccaccatct ccatttgcgt ctcctcggat tcccgccaaa tgcgctgcac
     1561 catctctacc agctgcttcc agagcgccgt cttacgcagg aagttggcaa ggcagacgag
     1621 aataaaggcc caagccaggc ccaaatagta atccgtctgc acaatgggtt tattagacag
     1681 cggctccatc tctgcgcgag tgaggatgat cggatcaatg gcctgcggat tcacagtctt
     1741 catattggtg tgactcatta tgaaactggc aaagctgctc tttgtgtcct tccacccggg
     1801 ctcgaatttg attagcggcc tgccctggtg gaatagcatc agtgtgggca gcgaaacgat
     1861 gcaggaattc tgcattgaaa cgaccaaact cataggcatc cacataggcg atgggtagcg
     1921 tgggaaagta atggggcagc acgttgacca tcgaagccac acgagcgcac tccaagctgg
     1981 atgcggtgca gaaatggaca agcacacagt tgcccggctc gtggcgcttg gtggcattgc
     2041 catgggctta agcagattca ctatatcctt ggcactgcgc attatcagca gttccggctc
     2101 ggatgctgtc tcattctcga tatcccgctg caggcacttc atcataatag gtggctttcg
     2161 aaccggagca gctggtttag gtgcatgatg tgctcgtcat ccggggcaca tgtgtgtcgc
     2221 tccttcagca aggtttcgaa gctataatgg cactggcccg cgacacactc cagggaatac
     2281 acgtcaaatt tgagaagagc ccgaaatact ggagggcact tagtaatccg gagagttccg
     2341 cctggccctg cgccggcgca gagcacagtg gtataatgtt actgattgaa gaactcgata
     2401 taaataaata acgtacaaaa tacaaacaag agattttggt tcattatatc gttggttgga
     2461 cagctgttga aatagttggc tgttatatgg cactcgtgaa atacctggaa acttcttagg
     2521 tttggatata ccgaatagca aggtaaactg cttgaccttg tttttgtaag cagtgcccat
     2581 taagttggta tttcatcgat gaaacattga cgatgtatcg aaaaacatcg atgcttattt
     2641 ttacatcgct acaataagtt tatattttta ccttacctta ttttcatttt cgtctgcgct
     2701 cgctggtgat tccttggtgg cattacatca ttggtggatc cattcggatc aatttagaag
     2761 cgccacgatg acggagctgg gcatggagct ggagagcgtt cgcctggcca catttgggga
     2821 atggcccctg aatgccccag tttccgcgga ggatctggtc gccaatggtt tctttgccac
     2881 gggaaactgg ctggaggccg agtgccattt ctgccacgtg cgcatcgacc gctgggaata
     2941 cggcgatcaa gtggcggagc atcgacgctc tcgcccatct gctcatggtt ctggctccaa
     3001 tcatgcggca atgttccagg agccaggaga gcgacaacga ggaaacagcg tagtggacag
     3061 cccggagtcc tgctcttgtc ccgatctctt gttggaggcc aatcgcttgg taactttcaa
     3121 ggactggccg gtgagtaccc tgagctggtg tcgctcgctt ctggtgattc accatagcgg
     3181 gtcattgtaa tcactatagt ttcagtttca agctcactat aagtgcatat gtaagtatga
     3241 ttgcgtagtt aaaaagtagc gtaaatgagg ccaggaaaat cccggtcgaa agtatcaatg
     3301 atatttttgt atacaaacaa gaaatgtctt gttagctgcc tcaattcagc tgaatgttga
     3361 ttgataatcc tacgaaatta agctttaatt aagatataca aaaatcatta tgaacttcaa
     3421 atgaagttat tgtatactgt ataatttcaa atatttttaa tgactgaata agatagttta
     3481 actttagccc aaaacgtctt cctttgtaga atcccaacat cacgccgcag gctctggcaa
     3541 aggcaggttt ctactacctg aaccgtctgg atcacgtgaa gtgtgtttgg tgcaacggag
     3601 tgattgccaa gtgggagaag aacgacaatg cctttgaaga gcacaagcgc ttttttcccc
     3661 aatgtcctcg tgtgcaaatg ggccccctta tagagtttgc caccgggaag aacctggatg
     3721 agctgggcat ccagcccacc actctgccac tgcgtcccaa gtacgcctgc gtggacgcca
     3781 gattgagaac cttcaccgat tggcccattt ccaatattca gcccgcttcg ctttggcgca
     3841 ggctggccta tattatcaga aataggcgac caggtgcgct gtttccactg caacattgga
     3901 ttgcgctcct ggcagaagga ggacgagccg tggttcgaac acgccaagtg gtcgccaaag
     3961 tgtcagttcg ttttgctggc caagggtcca gcctatgtaa gcgaagtgct cgcgacaaca
     4021 gctgccaacg ccagttccca gacagcaact tgctccggct ccaacgctcc aacggagacg
     4081 tactgatgga tgaagctccg gccaaggagg ccctagcctt gggtatcgat ggaggagttg
     4141 tgcgcaatgc catccagcgc aagctcttga gttccgctgc gctttctcta cgttggacga
     4201 actattgcat gacatctttg acgatgccgg cgcaggagct gcactggagg tccgagccgc
     4261 cggagccaag tgctcctttt attgaaccat gtcaggccac caccagcaag gcggcatctg
     4321 tgccaatacc ggtggccgat tccatcccag ccaaaccaca ggcagctgaa gcagtggcga
     4381 atatatcgaa aatcacagac gaaatacaaa agatgtcggt ggccacgccg aacggaaacc
     4441 tgtcgctgga ggaggaaaac cgccagctga aggatgcacg cttatgcaag gtatgcttgg
     4501 acgaggaggt tggcgtagtg ttcctgccct gcggccactt gggtaagtcg ctgaactata
     4561 ccttgattgc cttgagctgt agctaacttc ctgttaaccc gacagccacc tgcaatcagt
     4621 gcgcccccag tgtagccaat tgtcccatgt gccgcgcaga catcaaggga ttcgtgcgca
     4681 cgttcctttc gtgaagtgca tatcgacatc atttagagtt caccagctag ttagcagtta
     4741 agcaaatgat tgattgcacc cacacaaact actacagcga agttcaaatt atccggtgat
     4801 tagctaatat aatcgggtac taagtacttg gccaactgca gctattcgtt tttacattag
     4861 ctacggttgt aagttgtcgt tactaactat cgcattgtgt ccgagcgcat cccttttgaa
     4921 ccatacatta tgcacgctga aatgacctta tatagatgag ccagctctaa ttcgcgctga
     4981 aaagggtatc aatgcaccgg cacgaccgca gatcacatgg atttcttgtt atagtactct
     5041 tattaacaca tgtatgtatt tttgttgatc atgtttatag gccgctgata gtatggttta
     5101 cacacaacta tatgcattct ccaataaatg tatatgtaaa tgttaaaaaa tttgtctttt
     5161 caattgcaaa aattctttaa aataatttat ttattttgct aagttttaaa tcccaacggt
     5221 cttcaagtga tgtgccccga gagattagcc tattagcttg caacagtctg attccactgc
     5281 tcacaactat ctcgatatca tcgccat
//