HDTenEightyP/NetNews huggingface dataset:
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human ADH2 gene (allele 2) for alcohol dehydrogenase beta-2 exon 6
Date: 6 Nov 92 18:28:58 GMT
Distribution: bionet
Checksum: 62194 3

LOCUS       HUMADH226     291 bp ds-DNA             PRI       02-NOV-1992
DEFINITION  Human ADH2 gene (allele 2) for alcohol dehydrogenase beta-2 exon 6
            (EC 1.1.1.1).
ACCESSION   X15452
KEYWORDS    ADH2 gene; alcohol dehydrogenase.
SEGMENT     6 of 7
SOURCE      Homo sapiens.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Yokoyama,S.
  JOURNAL   Unpublished (1989) see COMMENT for author address
  STANDARD  full automatic
REFERENCE   2  (bases 1 to 291)
  AUTHORS   Matuso,Y., Yokoyama,R. and Yokoyama,S.
  TITLE     The genes for human alcohol dehydrogenases beta 1 and beta 2 differ
            by only one nucleotide
  JOURNAL   Eur. J. Biochem. 183, 317-320 (1989)
  STANDARD  full automatic
COMMENT     see x15447

              EMBL features not translated to GenBank features:
              key        from     to       description

              TRANSCR      <1   >291       primary transcript

              MSG          16    276       Exon 6
               [1] Author address Yokoyama S., University of Illinois at
            Urbana-Champaign, Shelford Vivarium, 606 East Healey Street,
            Champaign, IL 61820 USA.
               Submitted (31-MAY-1989) to the EMBL Data Library by:
FEATURES             Location/Qualifiers
     intron          <1..15
                     /note="Intron V (approx. 2.0 kb)"
                     /gene="ADH2"
     exon            16..276
                     /note="alcohol dehydrogenase beta-2 (AA 192 - 278)"
                     /gene="ADH2"
     intron          277..>291
                     /note="Intron VI (approx. 2.2 kb)"
                     /gene="ADH2"
BASE COUNT       79 a     64 c     80 g     68 t
ORIGIN      
        1 tttctgaaaa cacaggtcac cccaggctct acctgtgctg tgtttggcct gggaggggtc
       61 ggcctatctg ctgttatggg ctgtaaagca gctggagcag ccagaatcat tgcggtggac
      121 atcaacaagg acaaatttgc aaaggccaaa gagttgggtg ccactgaatg catcaaccct
      181 caagactaca agaaacccat ccaggaagtg ctaaaggaaa tgactgatgg aggtgtggat
      241 ttttcgtttg aagtcatcgg tcggcttgac accatggtat gtaccatgac a
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: 16S rRNA {clone MC18} [bacteria, new phylum related to Chlamydia
Date: 5 Nov 92 22:59:10 GMT
Distribution: bionet
Checksum: 11702 2

LOCUS       S108999        51 bp    rRNA            NLM       21-OCT-1992
DEFINITION  16S rRNA {clone MC18} [bacteria, new phylum related to Chlamydia
            and Planctomycetaceae, subsurface soil, cluster III, rRNA Partial,
            51 nt]
ACCESSION   S39793
KEYWORDS    .
SOURCE      bacteria cluster III subsurface soil new phylum related to
            Chlamydia and Planctomycetaceae
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 51)
  AUTHORS   Liesack,W. and Stackebrandt,E.
  TITLE     Occurrence of novel groups of the domain Bacteria as revealed by
            analysis of genetic material isolated from an Australian
            terrestrial environment.
  JOURNAL   J. Bacteriol. 174, 5072-5078 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 108999.
            This sequence comes from Fig. 5.  The authors begin their numbering
            at 997.
FEATURES             Location/Qualifiers
     rRNA            1..51
                     /partial
                     /note="16S rRNA.  Description: 16S rRNA."
BASE COUNT       15 a     11 c     14 g     11 t
ORIGIN      
        1 tgcatctcta agctggtgaa agccagtgac tcccgaaagg gagaatttgc a
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (10401.C.32) RNA.
Date: 5 Nov 92 23:09:04 GMT
Distribution: bionet
Checksum: 36775 1

LOCUS       HIV401C32X     56 bp ss-RNA             VRL       22-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (10401.C.32) RNA.
ACCESSION   L03511
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 56)
  AUTHORS   McNearney,T., Hornickova,Z., Markham,R., Birdwell,A., Arens,M.,
            Saah,A. and Ratner,L.
  TITLE     Relationship of human immunodeficiency virus type 1 sequence
            heterogeneity to stage of disease
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
BASE COUNT       23 a      7 c     12 g     14 t
ORIGIN      
        1 ctgttaaatg gcagtctagc agaagaagag gtaataatta gatctgaaaa tatcac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Borrelia hermsii outer membrane lipoprotein (vmp24) gene, complete
Date: 6 Nov 92 18:05:30 GMT
Distribution: bionet
Checksum: 41302 3

LOCUS       BORVMP24X     687 bp ds-DNA             BCT       28-OCT-1992
DEFINITION  Borrelia hermsii outer membrane lipoprotein (vmp24) gene, complete
            cds.
ACCESSION   L04786
KEYWORDS    outer membrane lipoprotein; vmp24 gene.
SOURCE      Borrelia hermsii (strain HS1) (library: ATCC 35209) DNA.
  ORGANISM  Borrelia hermsii
            Prokaryotae; Gracilicutes; Scotobacteria; Spirochetes;
            Spirochaetales; Spirochaetaceae.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Restrepo,B.I., Kitten,T., Carter,C.J., Infante,D. and Barbour,A.G.
  TITLE     Subtelomeric expression regions of Borrelia hermsii linear plasmids
            are highly polymorphic
  JOURNAL   Mol. Microbiol. (1992) In press
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..645
                     /evidence="EXPERIMENTAL"
                     /gene="vmp24"
                     /product="outer membrane lipoprotein"
                     /codon_start=1
                     /translation="MRKRISAIIMTLFMVFMSCNNGGPELKSDEVAKSDGTVLDLAKV
                     SKKIKEASAFAASVKEVETLVKSVDELAKAIGKKIKNDGGLDTEAGQNGSLIAGVHSV
                     VSAVKIKVGALETTSGISNELKTKITEVKSKAEAFLNKLKDGHTELGKKDASDDDTKK
                     AIKKDNSDKTKGASELEALNTAVDALLKAAEGEVEAAIKELTAPVKAEKPSQNN"
BASE COUNT      267 a     78 c    164 g    178 t
ORIGIN      
        1 atgagaaaaa gaataagtgc aataataatg actttattta tggtgtttat gtcatgtaat
       61 aatggagggc cagagcttaa aagtgacgaa gtggctaagt ctgacggaac agtacttgat
      121 ttggcaaagg taagtaaaaa gataaaagag gctagtgctt ttgcagcaag tgttaaagaa
      181 gtagagactc tagttaagtc agtagatgag cttgctaaag ctattggaaa gaaaattaaa
      241 aatgatgggg gtttggatac cgaagctggt caaaatgggt cgttaattgc aggagtgcat
      301 agtgtagtat cagctgtgaa aattaaagtg ggagcattgg aaacaacaag tggaatttct
      361 aatgagttga aaactaagat tactgaggtt aaaagtaaag ccgaagcatt cttaaataaa
      421 ttgaaagatg ggcatactga acttggtaaa aaagatgctt ctgatgatga cacaaaaaaa
      481 gctataaaga aagataatag tgataaaact aaaggagctt ctgagcttga agcactcaac
      541 acggctgttg atgccttgtt aaaggcagct gagggtgaag tagaagctgc aattaaagag
      601 cttacagctc ctgttaaagc agaaaaacct tctcaaaata actaactagg gaataaataa
      661 tttaagtagt tattataaga taagtta
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Gorilla gorilla glycophorin-gene related sequence.
Date: 6 Nov 92 18:28:33 GMT
Distribution: bionet
Checksum: 24127 1

LOCUS       GORGLYCOB     110 bp ds-DNA             PRI       02-NOV-1992
DEFINITION  Gorilla gorilla glycophorin-gene related sequence.
ACCESSION   L05162
KEYWORDS    glycophorin.
SOURCE      Gorilla gorilla DNA.
  ORGANISM  Gorilla gorilla
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Pongidae.
REFERENCE   1  (bases 1 to 110)
  AUTHORS   Rearden,A., Magnet,A., Kudo,S. and Fukuda,M.
  TITLE     Glycophorin B and glycophorin E genes arose from the glycophorin A
            ancestral gene via two duplications during primate evolution
  JOURNAL   J. Biol. Chem. (1992) In press
  STANDARD  full automatic
BASE COUNT       20 a     18 c     21 g     51 t
ORIGIN      
        1 ttcataattt tgctgctctc tttagctcct gtagtgataa tactcattat tttgtgtttg
       61 atggctggtg ttattggaat gatcctgtta atttcttaca gtgttctccg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Simian immunodeficiency virus (BM1) envelope glycoprotein (env)
Date: 6 Nov 92 18:35:13 GMT
Distribution: bionet
Checksum: 12050 2

LOCUS       SIVVRF        360 bp ss-RNA             VRL       02-NOV-1992
DEFINITION  Simian immunodeficiency virus (BM1) envelope glycoprotein (env)
            gene, partial cds.
ACCESSION   L05116
KEYWORDS    envelope glycoprotein; variable region.
SOURCE      Simian immunodeficiency virus (individual_isolate J150, strain 32H
            (reisolate of SIVmac251)) blood cDNA to genomic RNA.
  ORGANISM  Simian immunodeficiency virus
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Almond,N.M., Jenkins,A.R., Heath,A.B. and Kitchin,P.A.
  TITLE     Sequence variation in the env gene of Simian immunodeficiency virus
            recovered from immunised macaques is predominantly in the V1 region
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <130..>358
                     /note="V2 region"
                     /gene="env"
                     /product="envelope glycoprotein"
                     /codon_start=1
                     /translation="CTGLEQEQMIGCKFNMTGLKRDKTKEYNETWYSTDLVCEQGNST
                     DNESRCYMNHCNTSVIQESCDKHYWDTIRFRY"
     CDS             <1..>129
                     /note="V1 region"
                     /product="envelope glycoprotein"
                     /codon_start=1
                     /translation="CNKSETDKWGLTKSLTTTAPTAPTAASKIDMVNETSSCITHDN"
BASE COUNT      141 a     56 c     75 g     88 t
ORIGIN      
        1 tgcaataaaa gtgagacaga taaatgggga ttgacaaaat cattaacaac aacagcacca
       61 acagcaccaa cggcagcatc aaaaatagac atggtcaatg agactagttc ttgtataact
      121 catgataatt gcacaggctt ggaacaagag caaatgatag gctgtaaatt caacatgaca
      181 gggttaaaaa gagacaagac aaaggagtac aatgaaactt ggtactctac agatttggtt
      241 tgtgaacaag ggaatagcac tgataatgaa agtagatgct acatgaatca ctgtaacact
      301 tctgttatcc aagagtcttg tgacaaacat tattgggata ctattagatt taggtattgt
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human immunodeficiency virus type 1 (10304.G.12) RNA.
Date: 5 Nov 92 23:08:11 GMT
Distribution: bionet
Checksum: 52300 1

LOCUS       HIV304G12X     56 bp ss-RNA             VRL       22-SEP-1992
DEFINITION  Human immunodeficiency virus type 1 (10304.G.12) RNA.
ACCESSION   L03449
KEYWORDS    .
SOURCE      Human immunodeficiency virus type 1 RNA.
  ORGANISM  Human immunodeficiency virus type 1
            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
            Retroviridae; Lentivirinae.
REFERENCE   1  (bases 1 to 56)
  AUTHORS   McNearney,T., Hornickova,Z., Markham,R., Birdwell,A., Arens,M.,
            Saah,A. and Ratner,L.
  TITLE     Relationship of human immunodeficiency virus type 1 sequence
            heterogeneity to stage of disease
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (1992) In press
  STANDARD  full automatic
BASE COUNT       20 a      7 c     13 g     16 t
ORIGIN      
        1 ctgttaaatg gcagtctagc agaagaagag gtagtaatta gatctagtaa tttcac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Homo sapiens (clone A2418) rearranged Ig alpha-1 chain VH6-CH1
Date: 6 Nov 92 18:29:16 GMT
Distribution: bionet
Checksum: 61594 2

LOCUS       HUMIGAVCB     391 bp ss-mRNA            PRI       02-NOV-1992
DEFINITION  Homo sapiens (clone A2418) rearranged Ig alpha-1 chain VH6-CH1
            region (IGHA1) mRNA, partial cds.
ACCESSION   L04767
KEYWORDS    constant region subgroup CH1; immunoglobulin alpha-1 chain;
            immunoglobulin heavy chain; processed gene; variable region;
            variable region subgroup VH6.
SOURCE      Homo sapiens (individual_isolate patient GRE) female spleen cDNA to
            mRNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Varade,W.S. and Insel,R.A.
  TITLE     Isolation of germinal center-like events from human spleen RNA:
            Somatic hypermutation of a clonally related VH6DJH rearrangement
            expressed with IGM, IGG, and IGA
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             <1..>391
                     /evidence="EXPERIMENTAL"
                     /gene="IGHA1"
                     /product="immunoglobulin alpha-1 chain"
                     /codon_start=1
                     /translation="PGLVKASQTLSLTCAISGDSVSSRSGAWHWIRQSPSRGLEWLGR
                     TFYRSEWRNEYAVSVKNRITINADTSSNQFSLQLNSVTPEDAAVYYCARDGRHATEGS
                     GSYHVAYWGQGTLVTVSSASPTSPKVFP"
BASE COUNT       90 a    113 c    110 g     78 t
ORIGIN      
        1 ccaggactgg tgaaggcctc gcagaccctc tcactcacct gtgccatctc cggggacagt
       61 gtctctagca ggagtggtgc ttggcactgg atcaggcagt ccccatcgag aggccttgag
      121 tggctgggaa ggacattcta caggtccgag tggcgtaatg agtatgcagt gtccgtgaaa
      181 aatcgaataa ccatcaacgc agacacatcg agcaaccagt tctccctgca gctgaactct
      241 gtgactcccg aggacgcggc cgtatattac tgtgcaagag atggaagaca tgcaaccgaa
      301 ggttcgggga gttatcatgt agcctattgg ggccagggaa ccctggtcac cgtctcctca
      361 gcatccccga ccagccccaa ggtcttcccg c
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Brachydanio rerio MHC class II DA-beta-1*01-G2 gene, exon 3.
Date: 6 Nov 92 18:09:02 GMT
Distribution: bionet
Checksum: 16136 2

LOCUS       ZEFMHDABAC    229 bp ds-DNA             VRT       28-OCT-1992
DEFINITION  Brachydanio rerio MHC class II DA-beta-1*01-G2 gene, exon 3.
ACCESSION   L04807
KEYWORDS    beta chain; cell surface glycoprotein; class II gene;
            integral membrane protein; major histocompatibility complex.
SOURCE      Brachydanio rerio DNA.
  ORGANISM  Brachydanio rerio
            Eukaryota; Animalia; Chordata; Vertebrata; Osteichthyes;
            Actinopterygii; Cypriniformes; Cyprinoidei; Cyprinidae.
REFERENCE   1  (sites)
  AUTHORS   Ono,H., Klein,D., Vincek,V., Figueroa,F., O'hUigin,C., Tichy,H. and
            Klein,J.
  TITLE     Mhc Class II genes of Zebrafish: Origin, Polymorphism, and
            expression
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     misc_feature    1..229
                     /note="This feature applies to a gene which lacks a coding
                     region feature. "
                     /gene="DAB1*01-G2"
     exon            <1..>229
                     /number=3
                     /gene="DAB1*01-G2"
                     /note="putative"
                     /citation=[1]
BASE COUNT       70 a     49 c     53 g     57 t
ORIGIN      
        1 tgcaggctga aggtaaacat ccagctatgc tgctgtgcga tgcatatgag ttctacccta
       61 aaaaaattaa aatgtcttgg ctgagagatg ataaagtggt gacctcagat gtgacctcca
      121 ctatagagat ggctaatggt aactggtact atcagattca ctctcacctt gaatacactc
      181 ccaaatctgg agagaagatc caatgtgtgg tggagcacgc cagctcaac
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: TCR J alpha (J alpha FR12.1)=T cell receptor alpha-chain [human,
Date: 5 Nov 92 23:13:24 GMT
Distribution: bionet
Checksum: 28864 2

LOCUS       S111009        67 bp    mRNA            NLM       26-OCT-1992
DEFINITION  TCR J alpha  (J alpha  FR12.1)=T cell receptor alpha-chain [human,
            synovial fluid lymphocytes, mRNA Partial,  nt]
ACCESSION   S42426
KEYWORDS    .
SOURCE      human synovial fluid lymphocytes
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 67)
  AUTHORS   Ricken,G., Pluschke,G. and Krawinkel,U.
  TITLE     T cell receptor alpha-chain germ line transcripts from activated
            lymphocytes.
  JOURNAL   Immunol. Lett. 32, 97-98 (1992)
  STANDARD  full automatic
COMMENT     This entry incorporates information provided by the National
            Library of Medicine's GenInfo Backbone as NCBI gibbsq 111009.
            This sequence comes from Fig. 1.
FEATURES             Location/Qualifiers
     misc_feature    1..67
                     /partial
                     /note="This feature applies to a gene which lacks a coding
                     region feature. Description: T cell receptor alpha-chain;
                     Allele: J<alpha> FR12.1."
                     /gene="TCR J<alpha>"
BASE COUNT       21 a     13 c     20 g     13 t
ORIGIN      
        1 acacagtgtg actatgggaa caacagactc gcttttggga aggggaacca agtggtggtc
       61 ataccaa
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Nocardiopsis dassonvillei 23S rRNA gene insertion sequence.
Date: 6 Nov 92 18:32:52 GMT
Distribution: bionet
Checksum: 01293 2

LOCUS       NOP23RRNAA    106 bp ds-DNA             BCT       02-NOV-1992
DEFINITION  Nocardiopsis dassonvillei 23S rRNA gene insertion sequence.
ACCESSION   M85125
KEYWORDS    23S ribosomal RNA; insertion.
SOURCE      Nocardiopsis dassonvillei (library: DSM 43111) DNA.
  ORGANISM  Nocardiopsis dassonvillei
            Prokaryotae; Firmicutes; Nocardioform actinomycetes;
            Nocardiodaceae.
REFERENCE   1  (bases 1 to 106)
  AUTHORS   Roller,C., Ludwig,W. and Schleifer,K.H.
  TITLE     Gram-positive bacteria with a high DNA G+C content are
            characterized by a common insertion within their 23S rRNA genes
  JOURNAL   J. Gen. Microbiol. 138, 1167-1175 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1..106
                     /standard_name="23S rRNA insertion"
                     /note="this span absent in E. coli; located between
                     helices 54 and 55"
                     /product="23S ribosomal RNA"
BASE COUNT       20 a     22 c     34 g     30 t
ORIGIN      
        1 cgtccagtac tgaatcaggt gatgctaacc acgctggtgg tcttgggtcc cttcggggag
       61 ctttgactta ctggtctggg aaccgagctt gtagtaggta agtgat
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Mus caroli beta-2-microglobulin gene, partial cds.
Date: 6 Nov 92 18:31:16 GMT
Distribution: bionet
Checksum: 02992 2

LOCUS       MUSKARB2MG    278 bp ds-DNA             ROD       02-NOV-1992
DEFINITION  Mus caroli beta-2-microglobulin gene, partial cds.
ACCESSION   L04989
KEYWORDS    b2 microglobulin; beta-2-microglobulin.
SOURCE      Mus caroli (strain KAR) DNA.
  ORGANISM  Mus caroli
            Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria;
            Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 278)
  AUTHORS   Hermel,E., She,J.-X.X. and Fischer Lindahl,K.
  TITLE     Divergent evolution of B2-microglobulin in wild Mus species
  JOURNAL   Unpublished (1993)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     CDS             1..278
                     /partial
                     /product="beta-2 microglobulin"
                     /codon_start=3
                     /translation="SPQIQVYTRHPPENGKPNILNCYVSQFHPPHIEIEMLKNGKKIP
                     EIEMSDLSFSKDWSFYILAHTEFTPTDSDTYSCRVTHVSMKEPKTVNW"
BASE COUNT       87 a     79 c     53 g     59 t
ORIGIN      
        1 aatcccctca aattcaagtg tacacacgcc acccaccgga gaatgggaag ccaaacatcc
       61 tcaactgcta cgtatcacag ttccacccgc ctcacattga aatcgaaatg ctgaagaacg
      121 ggaaaaaaat tcctgaaata gagatgtcag atctgtcctt cagcaaggac tggtctttct
      181 atatcctggc tcacactgaa ttcaccccca ctgacagtga tacatactcc tgcagagtta
      241 cgcatgtcag tatgaaggag cccaagaccg tcaactgg
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Oxytricha trifallax JRB310 micronucleus transposon TBE1 flanking
Date: 6 Nov 92 18:33:34 GMT
Distribution: bionet
Checksum: 59498 2

LOCUS       OFACJTBEQ     160 bp ds-DNA             INV       02-NOV-1992
DEFINITION  Oxytricha trifallax JRB310 micronucleus transposon TBE1 flanking
            sequence from primer 10, clone 14.
ACCESSION   L02861
KEYWORDS    target duplication; transposon; transposon TBE1.
SOURCE      Oxytricha trifallax DNA.
  ORGANISM  Oxytricha trifallax
            Eukaryota; Animalia; Protozoa; Ciliophora; Polyhymenophora;
            Spirotricha; Hypotrichida; Sporadotrichina; Oxytrichidae.
REFERENCE   1  (bases 1 to 160)
  AUTHORS   Williams,K., Doak,T.G. and Herrick,G.
  TITLE     Precise excision of Oxytricha trifallax telomere-bearing elements
            as circles closed by a copy of the flanking target duplication
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     repeat_region   <1..75
                     /rpt_type=other
                     /note="Inverted terminal repeat of TBE1-tri-14"
     misc_feature    76..>160
                     /note="flanking sequence of TBE1-tri-14"
BASE COUNT       55 a     27 c     16 g     62 t
ORIGIN      
        1 aataacctca acccctaaca aattccctac aaatcaaagc acttataaac ctcattaagg
       61 ggttttgggg ttttgaatct ctactctatt atgtttttct tttgatattt atagaaattg
      121 gcaacttgat aaattattta taaattttat aaataatcct
//
From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Arthobacter globiformis 23S rRNA gene insertion sequence.
Date: 6 Nov 92 18:14:32 GMT
Distribution: bionet
Checksum: 54366 2

LOCUS       ARG23RRNAC    112 bp ds-DNA             BCT       29-OCT-1992
DEFINITION  Arthobacter globiformis 23S rRNA gene insertion sequence.
ACCESSION   M85089
KEYWORDS    23S ribosomal RNA; insertion.
SOURCE      Arthrobacter globiformis (library: DSM 20124) DNA.
  ORGANISM  Arthrobacter globiformis
            Prokaryotae; Firmicutes; Irregular asporogenous rods.
REFERENCE   1  (bases 1 to 112)
  AUTHORS   Roller,C., Ludwig,W. and Schleifer,K.H.
  TITLE     Gram-positive bacteria with a high DNA G+C content are
            characterized by a common insertion within their 23S rRNA genes
  JOURNAL   J. Gen. Microbiol. 138, 1167-1175 (1992)
  STANDARD  full automatic
FEATURES             Location/Qualifiers
     rRNA            1..112
                     /standard_name="23S rRNA insertion"
                     /note="this span absent in E. coli; located between
                     helices 54 and 55"
                     /product="23S ribosomal RNA"
BASE COUNT       24 a     29 c     37 g     22 t
ORIGIN      
        1 cgcccatgtt gaacagggga tactaaccgc ccgagacctg cctgacaccc cttgtgggtg
       61 aagggttttg gtggagcgcg ggacctgatc ctgggaggca agcgtattaa ca
//