From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Bean golden mosaic geminivirus type II coat protein (AR1) gene
Date: 12 Sep 92 10:02:50 GMT
Distribution: bionet
Checksum: 27292     7

LOCUS       MBGCOAREPA   2647 bp ds-DNA             VRL       12-SEP-1992
DEFINITION  Bean golden mosaic geminivirus type II coat protein (AR1) gene
            complete cds, (AL2 and AL3) genes, complete cds.
ACCESSION   L01635
KEYWORDS    coat protein.
SOURCE      Bean golden mosaic virus (individual_isolate BGMV-DR, strain type
            II) DNA.
  ORGANISM  Bean golden mosaic virus
            Viridae; ss-DNA nonenveloped viruses; Geminiviridae.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Gilbertson,R.L., Faria,J.C., Hanson,S.F., Morales,F.J.,
            Ahlquist,P.G., Maxwell,D.P. and Russell,D.R.
  TITLE     Cloning of the complete DNA genomes of four bean-infecting
            geminiviruses and determining their infectivity by electric
            discharge particle acceleration
  JOURNAL   Phytopathol. 81, 980-985 (1991)
  STANDARD  full staff_entry
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Faria,J.C., Gilbertson,R.L., Hanson,S.F., Morales,F.J.,
            Ahlquist,P.G. and Maxwell,D.P.
  TITLE     Bean golden mosaic geminivirus type II isolates from Guatemala and
            the Dominican Republic: Nucleotide sequence of infectious clones
            and pseudorecombinants between these clones
  JOURNAL   Unpublished (1992)
  STANDARD  full staff_entry
FEATURES             Location/Qualifiers
     misc_feature    1..209
                     /function="viral origin of replication"
                     /standard_name="Common Region"
                     /note="putative"
     CDS             344..1129
                     /product="coat protein"
                     /gene="AR1"
                     /note="putative"
                     /codon_start=1
                     /translation="MHAHSTCKSRMPKRDAPWRNNAGTYKVSRSGNYSPGGGMGSKSN
                     KANAWVNRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITR
                     GNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQV
                     FNMFDNEPSTATVKNDLRDRYQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNH
                     QEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN"
                     /citation=[1]
                     /citation=[2]
     CDS             complement(1126..1524)
                     /function="unknown"
                     /gene="AL3"
                     /note="putative"
                     /codon_start=1
                     /translation="MDSRTGENITAHQAENSVFIWEVPNPLYFKIMRVEDPAYTRTRI
                     YHIQVRFNHNLRKALDLHKAFLNFQVWTTSIQASGTTYLNRFRHLVLLYLHRLGVIGL
                     NNVNRAVQFATDKSYVNTVLENHEIKYKFY"
                     /citation=[1]
                     /citation=[2]
     CDS             complement(1271..1789)
                     /function="unknown"
                     /gene="AL2"
                     /note="putative"
                     /codon_start=1
                     /translation="MESRFKLKEEYHQSCCAIQVRVPVIKTSSTKKKTELYTTGLFIM
                     RSSSPSQPPSIKAQHRIAKRKAIRRRRIDLNCGCSIFYHIKCADHGFTHRGEHHCASG
                     REFRFYLGGTKSPLFQDHAGGRSSIHTDKDIPHPSQVQSQPQESTGSPQSIPELPSLD
                     DIDSSFWDDIFK"
                     /citation=[1]
                     /citation=[2]
BASE COUNT      706 a    530 c    591 g    820 t
ORIGIN
        1 gtgatggcat atttgtaaat atgcgagtgt cttccgaatg ggtttgcgag tgtctccaat
       61 tgaggctcct caaactctcg cattcaattg gagactggag tacaatatat actagaaccc
      121 tcaatctcgt gaattacgag attcacacac gtggcggcca tccgatataa tattaccgga
      181 tggccgcgcg ccccccttta tttccgtact tctccacgtg gcgctttaat ttaaattaaa
      241 gatgtctatt tttgactgac caatgctttt gcatgtgagg agcttagtta tttgtgtaaa
      301 acttggcgac taagttttac cctcgtttat aaatttaaat taaatgcatg cccattccac
      361 gtgtaagtcc agaatgccta agcgtgatgc gccttggcgt aataatgcgg gaacctacaa
      421 ggtttcccgt tctggcaatt attctccagg cggtggaatg ggctcaaaat ccaacaaggc
      481 caatgcatgg gttaacaggc ccatgtatag aaagccaagg atatatcgga tgtacagaag
      541 cccagacgtg cccaagggat gtgaaggacc ttgcaaggtc caatcatatg aacaacgcca
      601 tgatatatct catgttggta aggttatgtg tatatccgat atcacacgtg ggaatggtat
      661 tacccaccgt gttggtaaac gtttttgtgt gaagtctgtg tacattttag ggaagatatg
      721 gatggatgaa aatatcaagc ttaagaacca tactaatagt gttatatttt ggttggtccg
      781 tgaccgtaga ccatatggaa cccctatgga ttttggtcaa gtttttaata tgtttgacaa
      841 tgaacccagt actgctacgg tcaagaacga tcttcgtgat cgttatcaag ttatgcatag
      901 gttcaatgca aaggtgactg gtggtcaata tgcaagcaac gagcaagcct tggtaaggcg
      961 attttggaag gtgaacaacc atgtcgtcta taaccaccag gaagcaggaa aatacgagaa
     1021 tcatacggag aatgcgttat tgttatatat ggcatgtaca catgcctcta atcctgtata
     1081 tgcgacattg aaaattcgga tctatttcta tgattcgata accaattaat aaaatttata
     1141 ttttatttca tgattctcaa gtacagtatt tacatatgat ttgtctgttg cgaactgaac
     1201 agctcgattg acattgttta atcctattac gcctaaccta tgtaaataca ataaaaccaa
     1261 atgtctaaat ctatttaaat atgtcgtccc agaagcttga atcgatgtcg tccagacttg
     1321 gaagttcagg aatgctttgt ggagatccag tgctttcctg aggttgtgat tgaacctgac
     1381 ttggatgtgg tatatccttg tccgtgtgta tgctggatct tccacccgca tgatcttgaa
     1441 ataaagggga tttggtacct cccaaataaa aacggaattc tctgcctgat gcgcagtgat
     1501 gttctcccct gtgcgtgaat ccatgatctg cgcacttgat atggtaaaat atggaacagc
     1561 cgcagttcag gtcaatgcgt cgtcgacgaa tggctttacg tttggcaatc ctgtgctgtg
     1621 ctttgataga ggggggctgt gagggtgacg aagatcgcat tatgaatagt ccagttgtgt
     1681 aaagctcggt tttcttcttt gtcgaggaag tctttataac tggaaccctc acctggattg
     1741 cacagcacga ttgatggtat tcctccttta atttgaaccg gctttccata tttacagttt
     1801 gattgccagt ccttttgtgc cccaattagt tctttccagt gctttaactt caaataattg
     1861 gggcttatgt catcaatgac gttgtattcc acctcgttgg aatagacacg tgaattaaag
     1921 tccaagtgac cgctcaaata attatgtggt cctaatgcac gagcccacat tgtttttcct
     1981 gttcgtgaat caccttcgac gatgatacta ataggtctct ccggccgcgc agcggaaccc
     2041 cttccgaaat agtcgtcaac ccattcttgc ataacaaccg gaacattgat gaatgatgac
     2101 aacggaaatg gaggaaccca tggttccggc actttgaaga agatccgttc gagattagaa
     2161 cggatgttgt gattttgaag gacgtaatct ttcggttgtt cttcctttaa tatcgtcaag
     2221 gcagattcaa ttgaatctgc gtttaatgcc tttgcatatg agtcgttggc agtctgctga
     2281 ccccctcttg cagatctgcc gtcgacttga aattgtcccc attcgattgt gtctccatct
     2341 ttgtcgatgt atgctttgac gtctgaactt gatttagctc cctgaatgtt cggatggaaa
     2401 tgtgctgacc tggttgagga taccaggtcg aacaatcttt tatttgtgca gacgaattta
     2461 ccttcgaact gaataagcgc atgaagatgg ggttcaccat tctcgtgacg ttcctcacag
     2521 actttgatga attttttatt cgtcgctgta tgaatcttct gaagttgcga aagagcttct
     2581 tctttcggta tagagcaatg aggataagtg aggaaatagt ttttggactg aactctaaat
     2641 ctatgag
//