From: GenBank-Updates@net.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: polyprotein {3' region} [papaya ringspot virus PRSV, severe HA
Date: 27 Jan 93 06:01:30 GMT
Distribution: bionet
Checksum: 46706 6

LOCUS       S119977      2561 bp    mRNA            VRL       21-JAN-1993
DEFINITION  polyprotein {3' region} [papaya ringspot virus PRSV, severe HA
            strain, mRNA, 2561 nt]
ACCESSION   S49774
KEYWORDS    .
SOURCE      papaya ringspot virus PRSV severe HA strain
  ORGANISM  Unclassified.
            Unclassified.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Wang,C.H. and Yeh,S.D.
  TITLE     Nucleotide sequence comparison of the 3'-terminal regions of
            severe, mild, and non-papaya infecting strains of papaya ringspot
            virus.
  JOURNAL   Arch. Virol. 127, 345-354 (1992)
  STANDARD  full automatic
COMMENT     This entry [NCBI gibbsq 119977] was created by the journal scanning
            component of NCBI/GenBank at the National Library of Medicine.
            This sequence comes from Fig. 1.
FEATURES             Location/Qualifiers
     CDS             1..2355
                     /partial
                     /note="For the protein sequence (NCBI gibbsq 119979):
                     Method: conceptual translation supplied by author.  This
                     sequence comes from Fig. 1."
                     /product="polyprotein"
                     /codon_start=1
                     /translation="LECDEEAKAFFSPLMGHYMKSVLSKEAYIKDLLKYSSDIVVGEV
                     NHDVFEDSVAQVIELLNDHECPELEYITDSEVIIQALNMDAAVGALYTGKKRKYFEGS
                     TVEHRQALVRKSCERLYEGRMGVWNGSLKAELRPAEKVLAKKTRSFTAAPLDTLLGAK
                     VCVDDFNNWFYSKNMECPWTVGMTKFYKGWDEFLKKFPDGWVYCDADGSQFDSSLTPY
                     LLNAVLSIRLWAMEDWDIGEQMLKNLYGEITYTPILTPDGTIVKKFKGNNSGQPSTVV
                     DNTLMVLITMYYALRKAGYDTKTQEDMCVFYINGDDLCIAIHPDHEHVLDSFSSSFAE
                     LGLKYDFAQRHRNKQNLWFMSHRGILIDDIYIPKLEPERIVAILEWDKSKLPEHRLEA
                     ITAAMIESWGYGDLTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVGLRRLYTSERGS
                     MDELEAYIDKYFERERGDSPELLVYHESRGTDDYQLVCSNNTHVFHQSKNEAVDAGLN
                     EKLKEKEKQKEKEKEKQKEKEKDGASDGNDVSTSTKTGERDRDVNVGTSGTFTVPRIK
                     SFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDISNTRATHSQFEKWYEGVRNDYGLNDN
                     EMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFS
                     NAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKA
                     AALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN"
BASE COUNT      790 a    451 c    641 g    679 t
ORIGIN      
        1 ctcgagtgtg atgaagaggc taaagctttc tttagtccac ttatgggtca ctacatgaag
       61 agtgttctga gcaaggaagc gtacattaag gatttattga aatattcaag tgatattgtc
      121 gttggagaag tcaaccatga tgtttttgag gatagtgttg cgcaagttat cgagctgtta
      181 aatgatcatg agtgtcccga acttgaatac ataacagaca gtgaagtgat tatacaagcc
      241 ttgaacatgg atgcagctgt cggagcctta tatacgggaa agaaaaggaa atattttgag
      301 ggatcaacag tggagcatag acaagctctt gtacggaaaa gctgtgagcg tctctacgaa
      361 gggagaatgg gcgtctggaa cggttcgctg aaggcagaac tgagaccagc tgagaaagtg
      421 ctcgcgaaaa agacaaggtc atttacagca gcccctcttg acacactatt aggagccaaa
      481 gtctgcgttg atgatttcaa caactggttt tacagtaaga atatggagtg cccatggacc
      541 gtcgggatga caaaatttta caaaggctgg gatgagttcc tgaagaaatt tcctgacggc
      601 tgggtgtact gtgatgcaga tggttcccag ttcgatagct cattaacacc atacttgttg
      661 aatgctgtgc tatcaattcg gttatgggcg atggaggatt gggatattgg agagcaaatg
      721 cttaagaact tgtacgggga aatcacttac acgccaatac tgacgccaga tggaacaatt
      781 gtcaagaaat tcaagggcaa taatagtggc caaccttcga cagttgttga taatacattg
      841 atggttttaa tcacaatgta ttacgcacta cggaaggctg gttacgatac gaagactcaa
      901 gaagatatgt gtgtatttta tatcaatggt gatgatctct gtattgccat tcacccggat
      961 catgagcatg ttcttgactc attctctagt tcatttgctg agcttgggct taagtatgat
     1021 ttcgcacaaa ggcatcggaa taaacagaat ttgtggttta tgtcgcatcg aggtattctg
     1081 attgatgaca tttacattcc aaaacttgaa cctgagcgaa ttgtcgcaat tcttgaatgg
     1141 gacaaatcta agcttccgga gcatcgattg gaggcaatca cagcggcaat gatagagtca
     1201 tggggttatg gtgatctaac acaccagatt cgtagatttt accaatgggt tcttgagcaa
     1261 gctccattca atgagttggc gaaacaagga agggccccat acgtctcgga agttggatta
     1321 agaagattgt acacaagtga acgtggatca atggacgaat tagaagcgta tatagataaa
     1381 tactttgagc gtgagagagg agactcgccc gaattactag tgtaccatga atcaaggggc
     1441 actgatgatt atcaacttgt ttgtagcaac aatacgcatg tgtttcatca gtccaagaat
     1501 gaagctgtgg atgctggttt gaatgaaaaa ctcaaagaga aggaaaaaca gaaagaaaaa
     1561 gaaaaagaaa aacaaaaaga gaaagaaaaa gacggtgcta gtgacggaaa tgatgtgtca
     1621 actagcacaa aaactggaga gagagataga gatgtcaatg ttgggaccag tggaactttc
     1681 actgttccga gaattaaatc atttactgat aagatggttc taccgagaat taaggggaag
     1741 actgtcctta atttaaatca tcttcttcag tacaatccgc aacaaattga catttctaac
     1801 actcgtgcca ctcattcaca atttgagaag tggtatgagg gagtgaggaa tgattatggc
     1861 cttaatgata atgaaatgca agtgatgcta aatggtttga tggtttggtg tatcgagaat
     1921 ggtacatctc cagacatatc tggtgtctgg gttatgatgg atggggaaac ccaagttgat
     1981 tatccaatca agcctttgat tgagcatgct actccgtcat ttaggcaaat tatggctcac
     2041 tttagtaacg cggcagaagc atacattgcg aagagaaatg ctactgagag gtacatgccg
     2101 cggtatggaa tcaagagaaa tttgactgac attagcctcg ctagatacgc tttcgacttc
     2161 tatgaggtga attcgaaaac acctgatagg gctcgcgaag ctcacatgca gatgaaggct
     2221 gcagcgctgc gaaacaccag tcgcagaatg tttggtatgg acggcagtgt tagtaacaag
     2281 gaagaaaaca cggagagaca cacagtggaa gatgtcaata gagacatgca ctctctcctg
     2341 ggtatgcgca actaaatacc tgcgcttgtg tgtttgttga gtctgactcg accctgtttc
     2401 accttatggt actatataag cattagaata cagagtggct gcgccaccgc ttctatttta
     2461 cagtgagggt agccctccgt gcttttagta ttattcgagt tctctgagtc tccatacagt
     2521 gtgggtggcc cacgtgatat tcgagcctct tagaatgaga g
//