From: GUNNELL@FCRFV2.NCIFCRF.GOV (Mark A. Gunnell)
Newsgroups: bionet.molbio.bio-matrix
Subject: GenPept Release 74.0 flat file format available via anonymous ftp
Date: 16 Dec 92 20:44:53 GMT
Distribution: bionet


Subject:   GenPept Release 74.0 flat file format available via anonymous ftp
From:      fconvx.ncifcrf.gov
Directory: pub/genpept
Files:     gprel74.txt.Z, gpdat74.seq.Z

     This is to announce the availability of the GenPept(R) (GenBank Gene
Products) Database in a format similar to that formerly distributed by
GenBank(R) under the administration of Intelligenetics Inc.  The last
official full release of GenPept was in June, 1992 (Release 72.0), with
incremental releases made available via ftp from ncbi.nlm.nih.gov.  NCBI
also continues to provide a GenPept datafile pre-formatted for use with the
Pearson & Lipman Fasta program.  This GenPept release IS _NOT_ AN OFFICIAL 
RELEASE FROM THE NCBI-GENBANK, but an attempt to provide a data file 
compatible with other existing software products.  This flat file format is 
shown below:


-------------------------------------------------------------------------------
LOCUS       ABCAARAA_1
DEFINITION  A.aceti acetic acid resistance protein (aarA) gene, complete
            cds. Acetic acid resistance protein; (aarA).
DATE        15-SEP-1990
ACCESSION   M34830
ORGANISM    Acetobacter aceti Prokaryotae; Gracilicutes; Scotobacteria;
            Aerobic rods and cocci; Azotobacteraceae.
COMMENT     Nucleic Acid Features translated to generate this entry:
            CDS 185..1495 /note="acetic acid resistance protein; (aarA)"
            /codon_start=1
WEIGHT      48196.10
LENGTH      436
ORIGIN      Translated using phase 1
        1 MSASQKEGKL STATISVDGK SAEMPVLSGT LGPDVIDIRK LPAQLGVFTF DPGYGETAAC
       61 NSKITFIDGD KGVLLHRGYP IAQLDENASY EEVIYLLLNG ELPNKVQYDT FTNTLTNHTL
      121 LHEQIRNFFN GFRRDAHPMA ILCGTVGALS AFYPDANDIA IPANRDLAAM RLIAKIPTIA
      181 AWAYKYTQGE AFIYPRNDLN YAENFLSMMF ARMSEPYKVN PVLARAMNRI LILHADHEQN
      241 ASTSTVRLAG STGANPFACI AAGIAALWGP AHGGANEAVL KMLARIGKKE NIPAFIAQVK
      301 DKNSGVKLMG FGHRVYKNFD PRAKIMQQTC HEVLTELGIK DDPLLDLAVE LEKIALSDDY
      361 FVQRKLYPNV DFYSGIILKA MGIPTSMFTV LFAVARTTGW VSQWKEMIEE PGQRISRPRQ
      421 LYIGAPQRDY VPLAKR
//
-------------------------------------------------------------------------------
                Sample entry from GenPept flat file.

This format of the data is suitable as an input data file for the GCG
program GenBankToGCG/GENPEPT.  Compatibility with other software has not
been tested.

If you have questions or comments concerning this data file, please contact:
-------------------------------------------------------------------------------
Mark A. Gunnell                   | Internet: gunnell@ncifcrf.gov
Sci. Applications Analyst         | Bitnet:   gunnell%ncifcrf.gov@cunyvm.bitnet
Biomedical Supercomputer Center   | Phone:   (301) 846-5779
PRI/DynCorp                       |
NCI-FCRDC                         |
PO Box B, Bldg 430                |
Frederick, MD 21702-1201  USA     |
===============================================================================

GenPept (R) is a registered trademark of the U.S. Department of Health and
Human Services for the GenBank Gene Products Data Bank.

GenBank (R) is a registered trademark of the U.S. Department of Health and
Human Services for the Genetic Sequence Data Bank.
Newsgroups: bionet.molbio.bio-matrix