From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: M.musculus/R.norvegicus hybrid sequence for RVL-3 VL30 element
Date: 22 Jul 92 10:03:47 GMT
Distribution: bionet
Checksum: 34032     5

LOCUS       SYNTVL30     2362 bp ds-DNA             SYN       22-JUL-1992
DEFINITION  M.musculus/R.norvegicus hybrid sequence for RVL-3 VL30 element
ACCESSION   X53994
KEYWORDS    LTR; U5 small nuclear RNA; VL30 element; u3 small nuclear rna.
SOURCE      Artificial gene DNA.
  ORGANISM  Artificial gene
            Artificial sequences; Genes.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Rodland,K.D., Lenormand,P., Theodor,L., Pribnow,D. and Magun,B.E.
  TITLE     Unique features of a transcriptionally active VL30 element
  JOURNAL   Unpublished (1992)
  STANDARD  full automatic
COMMENT     *source: tissue=fibroblast; *source: cell_line=Rat-1 derivative
            cell line RVL-3; *source: clone_library=genomic in EMBL-3; *source:
            clone=pRVL-3;
            From EMBL    entry ARTVL30;  dated 30-APR-1992.
FEATURES             Location/Qualifiers
     misc_feature    1040..1057
                     /note="polypurine tract"
     snRNA           1057..1406
                     /product="U3 snRNA"
     LTR             1057..1710
     repeat_unit     1191..1225
                     /note="AP-1 site containing"
     misc_signal     1214..1229
                     /note="SRE/CArG box"
     repeat_unit     1225..1260
                     /note="AP-1 site containing"
     misc_signal     1249..1264
                     /note="SRE/CArG box"
     repeat_unit     1261..1296
                     /note="AP-1 site containing"
     CAAT_signal     1352..1356
     TATA_signal     1378..1384
     snRNA           1407..1601
                     /product="R snRNA"
     polyA_signal    1532..1537
     snRNA           1602..1710
                     /product="U5 snRNA"
BASE COUNT      624 a    546 c    485 g    707 t
ORIGIN
        1 ccgcctgttc tgcctgccgt ttcatcaggg cgagatgctc aatgcgctgc agagaaagac
       61 ctaagatgct gtggctaaaa gaaatcagat ggcaaatcta accgcccagg catcctaaag
      121 agcaatgatc ctgacagtct gaagactatc aagttataga caaattaaga ctggtaaaaa
      181 aaaccctgta taaaatagta aaaactgaaa aaagaaaact agtcctctca tgagaagaca
      241 gacctgacat ctactgaaaa atagacttta ctggaaaaaa tatgtgtatg aataccttct
      301 agtttttgtg aacgttctca agatggataa aagcttttcc ttgtaaaact gagactgatc
      361 agatagtcat caagaagatt gttaaagaaa attttccaag gttcggagtg ccaaaagcaa
      421 tagtgtcaga taatggtcct gcctttgttg cccaggtaag tcagggtgtg gccaagtatt
      481 tagaggtcaa ataaaaattc cattgtgtgt acagacctca gagctcagaa aagataaaaa
      541 agaataaata aaactctaaa cagaccttga caaaattaat cctggagact ggcacaggct
      601 tacttggtgc cccttcccct tgccctattt aaaactgaga atactccctc ttgattcggt
      661 tttactcttt tcaagatcct ttatggggct cctatgccat cactgtctta aatgatgtgt
      721 ttaaacctat gttgttataa taatgatctg tatactaagt taaaaggctt acaggtggtg
      781 cagaaaaaag tctggtcaca actggctaca gcgaacgagc tgggtacccc aaggacatct
      841 taccagttcc agccagagat ctgatctacg tacacctgcg tcatgctgag accctcaagc
      901 ctcactaaaa gggtccctgc ctagttctgt ttactaatct gccttattct gtttctgttc
      961 ccatgttaaa gatagagtaa atgcagtatt ctccacatag agatatagac ttctgaaatt
     1021 ctaagattag aattacttac aagaagaagt ggggaatgaa gaatgaaaaa ttactggcct
     1081 cttgtgagaa catgaacttt cacctcggag cccaccccct cccatctaga aaacattttt
     1141 gagataaagg cctcctggaa caacctcaaa atgacattgc caaatgataa gacatgactc
     1201 cttagttacg taggttcctt gataggacat gactccttag ttacgtaggt tccttgatag
     1261 gacatgactc cttagttacg tagaatcctt tggcagaacc ccttgtccct tggcagaact
     1321 ccctagtgat gtaaacttgt actttccctg cccagttctc ccccctttga gttttactat
     1381 ataagcctgt gaaaaatttt ggctggtcgt cgagactcct ctaccctgtg caaaggtgta
     1441 tgagtttcga ccccagagct ctgtgtgctt tctgttgctg ctttatttcg accccagagc
     1501 tctggtctgt gtgctttcat gtcgctgctt tattaaatct taccttctac attttatgta
     1561 tggtctcagt gtcttcttgg gtacgcggct gtcccgggac ttgagtgtct gagtgagggt
     1621 cttccctcga gggtctttca tttggtacat gggccgggaa ttcgagaatc tttcatttgg
     1681 tgcattggcc gggaattcga aaatctttca ggagtggtgg ttagggaggc acgtgcacac
     1741 acagtacagt acatatgtga atgtcagagg gcaaattgca gacactgtgt gagtgctggg
     1801 attgaactca ggtcatcagg cttggcaaca agtgtatgtg ctagatgagc cgtctttcca
     1861 gccctcactg tttcttttct aatggcacta atcttttttt tgttgttatt taattaattt
     1921 atttatttat ttatttattt acatttcaaa tgttatcccc tttcccagtt tctcctcaac
     1981 aaatccccta tcccctcccc ctccccctgc ttctatgacg gtgctcactc attcaccaac
     2041 ccattcctcc ctcaccacct tagcattcct ctactctggg acattgagcc ttcacaggac
     2101 caagggcctc tcctcccact gatgcctaac aaggccatcc tctgatacat atacagctgg
     2161 agccatggtc tctctgtgtg tactctttgg ttggtggttt agtccctggg atctccgggg
     2221 taggggggtg gggtctggtt ggttgctatt gttgttcttc ctatggggat gcaaaccccc
     2281 tcagctcctt cagttcttcc cctaactcct tgactgggga ccccatgctc agtctgatga
     2341 cctaagaatc tcctcaaagc tt
//