GenAI4ELab/papercli-papers huggingface dataset:
Buffer layers for Test-Time Adaptation
Authors: Hyeongyu Kim; GeonHui Han; Dosik Hwang
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: In recent advancements in Test Time Adaptation (TTA), most existing methodologies focus on updating normalization layers to adapt to the test domain. However, the reliance on normalization-based adaptation presents key challenges. First, normalization layers such as Batch Normalization (BN) are highly sensitive to small batch sizes, leading to unstable and inaccurate statistics. Moreover, normalization-based adaptation is inherently constrained by the structure of the pre-trained model, as it relies on training-time statistics that may not generalize well to unseen domains. These issues limit the effectiveness of normalization-based TTA approaches, especially under significant domain shift. In this paper, we introduce a novel paradigm based on the concept of a \textit{Buffer} layer, which addresses the fundamental limitations of normalization layer updates. Unlike existing methods that modify the core parameters of the model, our approach preserves the integrity of the pre-trained backbone, inherently mitigating the risk of catastrophic forgetting during online adaptation. Through comprehensive experimentation, we demonstrate that our approach not only outperforms traditional methods in mitigating domain shift and enhancing model robustness, but also exhibits strong resilience to forgetting. Furthermore, our \textit{Buffer} layer is modular and can be seamlessly integrated into nearly all existing TTA frameworks, resulting in consistent performance improvements across various architectures. These findings validate the effectiveness and versatility of the proposed solution in real-world domain adaptation scenarios. The code is available at https://github.com/hyeongyu-kim/Buffer_TTA.
Non-exchangeable Conformal Prediction with Optimal Transport: Tackling Distribution Shift with Unlabeled Data
Authors: Alvaro Correia; Christos Louizos
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Conformal prediction is a distribution-free uncertainty quantification method that has gained popularity in the machine learning community due to its finite-sample guarantees and ease of use. Its most common variant, dubbed split conformal prediction, is also computationally efficient as it boils down to collecting statistics of the model predictions on some calibration data not yet seen by the model. Nonetheless, these guarantees only hold if the calibration and test data are exchangeable, a condition that is difficult to verify and often violated in practice due to so-called distribution shifts. The literature is rife with methods to mitigate the loss in coverage in this non-exchangeable setting, but these methods require some prior information on the type of distribution shift to be expected at test time. In this work, we study this problem via a new perspective, through the lens of optimal transport, and show that it is possible to estimate the loss in coverage and mitigate arbitrary distribution shifts, offering a principled and broadly applicable solution.
Learnable Burst-Encodable Time-of-Flight Imaging for High-Fidelity Long-Distance Depth Sensing
Authors: Manchao Bao; Shengjiang Fang; Tao Yue; Xuemei Hu
Venue: NeurIPS 2025 (NeurIPS 2025 spotlight)

Abstract: Long-distance depth imaging holds great promise for applications such as autonomous driving and robotics. Direct time-of-flight (dToF) imaging offers high-precision, long-distance depth sensing, yet demands ultra-short pulse light sources and high-resolution time-to-digital converters. In contrast, indirect time-of-flight (iToF) imaging often suffers from phase wrapping and low signal-to-noise ratio (SNR) as the sensing distance increases. In this paper, we introduce a novel ToF imaging paradigm, termed Burst-Encodable Time-of-Flight (BE-ToF), which facilitates high-fidelity, long-distance depth imaging. Specifically, the BE-ToF system emits light pulses in burst mode and estimates the phase delay of the reflected signal over the entire burst period, thereby effectively avoiding the phase wrapping inherent to conventional iToF systems. Moreover, to address the low SNR caused by light attenuation over increasing distances, we propose an end-to-end learnable framework that jointly optimizes the coding functions and the depth reconstruction network. A specialized double well function and first-order difference term are incorporated into the framework to ensure the hardware implementability of the coding functions. The proposed approach is rigorously validated through comprehensive simulations and real-world prototype experiments, demonstrating its effectiveness and practical applicability. The code is available at: https://github.com/ComputationalPerceptionLab/BE-ToF.
Unleashing Foundation Vision Models: Adaptive Transfer for Diverse Data-Limited Scientific Domains
Authors: Qiankun Li; Feng He; Huabao Chen; Xin Ning; Kun Wang; Zengfu Wang
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: In the big data era, the computer vision field benefits from large-scale datasets such as LAION-2B, LAION-400M, and ImageNet-21K, Kinetics, on which popular models like the ViT and ConvNeXt series have been pre-trained, acquiring substantial knowledge. 
However, numerous downstream tasks in specialized and data-limited scientific domains continue to pose significant challenges. 
In this paper, we propose a novel Cluster Attention Adapter (CLAdapter), which refines and adapts the rich representations learned from large-scale data to various data-limited downstream tasks. Specifically, CLAdapter introduces attention mechanisms and cluster centers to personalize the enhancement of transformed features through distribution correlation and transformation matrices. This enables models fine-tuned with CLAdapter to learn distinct representations tailored to different feature sets, facilitating the models' adaptation from rich pre-trained features to various downstream scenarios effectively. In addition, CLAdapter's unified interface design allows for seamless integration with multiple model architectures, including CNNs and Transformers, in both 2D and 3D contexts.
Through extensive experiments on 10 datasets spanning domains such as generic, multimedia, biological, medical, industrial, agricultural, environmental, geographical, materials science, out-of-distribution (OOD), and 3D analysis, CLAdapter achieves state-of-the-art performance across diverse data-limited scientific domains, demonstrating its effectiveness in unleashing the potential of foundation vision models via adaptive transfer.
Code is available at https://github.com/qklee-lz/CLAdapter.
DualOptim: Enhancing Efficacy and Stability in Machine Unlearning with Dual Optimizers
Authors: Xuyang Zhong; Haochen Luo; Chen Liu
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Existing machine unlearning (MU) approaches exhibit significant sensitivity to hyperparameters, requiring meticulous tuning that limits practical deployment. In this work, we first empirically demonstrate the instability and suboptimal performance of existing popular MU methods when deployed in different scenarios. To address this issue, we propose Dual Optimizer (DualOptim), which incorporates adaptive learning rate and decoupled momentum factors. Empirical and theoretical evidence demonstrates that DualOptim contributes to effective and stable unlearning. Through extensive experiments, we show that DualOptim can significantly boost MU efficacy and stability across diverse tasks, including image classification, image generation, and large language models, making it a versatile approach to empower existing MU algorithms.
D$^2$GS: Dense Depth Regularization for LiDAR-free Urban Scene Reconstruction
Authors: Kejing Xia; Jidong Jia; Ke Jin; Yucai Bai; Li Sun; Dacheng Tao; Youjian Zhang
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Recently, Gaussian Splatting (GS) has shown great potential for urban scene reconstruction in the field of autonomous driving. However, current urban scene reconstruction methods often depend on multimodal sensors as inputs, $\textit{i.e.}$ LiDAR and images. Though the geometry prior provided by LiDAR point clouds can largely mitigate ill-posedness in reconstruction, acquiring such accurate LiDAR data is still challenging in practice: i) precise spatiotemporal calibration between LiDAR and other sensors is required, as they may not capture data simultaneously; ii) reprojection errors arise from spatial misalignment when LiDAR and cameras are mounted at different locations. To avoid the difficulty of acquiring accurate LiDAR depth, we propose ${D}^2GS$, a LiDAR-free urban scene reconstruction framework. In this work, we obtain geometry priors that are as effective as LiDAR while being denser and more accurate. $\textbf{First}$, we initialize a dense point cloud by back-projecting multi-view metric depth predictions. This point cloud is then optimized by a Progressive Pruning strategy to improve the global consistency. $\textbf{Second}$, we jointly refine Gaussian geometry and predicted dense metric depth via a Depth Enhancer. Specifically, we leverage diffusion priors from a depth foundation model to enhance the depth maps rendered by Gaussians. In turn, the enhanced depths provide stronger geometric constraints during Gaussian training. $\textbf{Finally}$, we improve the accuracy of ground geometry by constraining the shape and normal attributes of Gaussians within road regions. Extensive experiments on the Waymo dataset demonstrate that our method consistently outperforms state-of-the-art methods, producing more accurate geometry even when compared with those using ground-truth LiDAR data.
HyperMixup: Hypergraph-Augmented with Higher-order Information Mixup
Authors: Kaixuan Yao; Zhuo Li; Jianqing Liang; Jiye Liang; Ming Li; Feilong Cao
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Hypergraphs offer a natural paradigm for modeling complex systems with multi-way interactions. Hypergraph neural networks (HGNNs) have demonstrated remarkable success in learning from such higher-order relational data. While such higher-order modeling enhances relational reasoning, the effectiveness of hypergraph learning remains bottlenecked by two persistent challenges: the scarcity of labeled data inherent to complex systems, and the vulnerability to structural noise in real-world interaction patterns. Traditional data augmentation methods, though successful in Euclidean and graph-structured domains, struggle to preserve the intricate balance between node features and hyperedge semantics, often disrupting the very group-wise interactions that define hypergraph value. To bridge this gap, we present HyperMixup, a hypergraph-aware augmentation framework that preserves higher-order interaction patterns through structure-guided feature mixing. Specifically, HyperMixup contains three critical components: 1) Structure-aware node pairing guided by joint feature-hyperedge similarity metrics, 2) Context-enhanced hierarchical mixing that preserves hyperedge semantics through dual-level feature fusion, and 3) Adaptive topology reconstruction mechanisms that maintain hypergraph consistency while enabling controlled diversity expansion. Theoretically, we establish that our method induces hypergraph-specific regularization effects through gradient alignment with hyperedge covariance structures, while providing robustness guarantees against combined node-hyperedge perturbations. Comprehensive experiments across diverse hypergraph learning tasks demonstrate consistent performance improvements over state-of-the-art baselines, with particular effectiveness in low-label regimes. The proposed framework advances hypergraph representation learning by unifying data augmentation with higher-order topological constraints, offering both practical utility and theoretical insights for relational machine learning.
GVPO: Group Variance Policy Optimization for Large Language Model Post-Training
Authors: Kaichen Zhang; Yuzhong Hong; Junwei Bao; Hongfei Jiang; yang song; Hong Dingqian; Hui Xiong
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Post-training plays a crucial role in refining and aligning large language models to meet specific tasks and human preferences. While recent advancements in post-training techniques, such as Group Relative Policy Optimization (GRPO), leverage increased sampling with relative reward scoring to achieve superior performance, these methods often suffer from training instability that limits their practical adoption. As a next step, we present Group Variance Policy Optimization (GVPO). GVPO incorporates the analytical solution to KL-constrained reward maximization directly into its gradient weights, ensuring alignment with the optimal policy. The method provides intuitive physical interpretations: its gradient mirrors the mean squared error between the central distance of implicit rewards and that of actual rewards. GVPO offers two key advantages: (1) it guarantees a unique optimal solution, exactly the KL-constrained reward maximization objective, (2) it supports flexible sampling distributions that avoids on-policy and importance sampling limitations. By unifying theoretical guarantees with practical adaptability, GVPO establishes a new paradigm for reliable and versatile LLM post-training.
Uncertainty Estimation by Flexible Evidential Deep Learning
Authors: Taeseong Yoon; Heeyoung Kim
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Uncertainty quantification (UQ) is crucial for deploying machine learning models in high-stakes applications, where overconfident predictions can lead to serious consequences.  An effective UQ method must balance computational efficiency with the ability to generalize across diverse scenarios. Evidential deep learning (EDL) achieves efficiency by modeling uncertainty through the prediction of a Dirichlet distribution over class probabilities. However, the restrictive assumption of Dirichlet-distributed class probabilities limits EDL's robustness, particularly in complex or unforeseen situations. To address this, we propose *flexible evidential deep learning* ($\mathcal{F}$-EDL), which extends EDL by predicting a flexible Dirichlet distribution—a generalization of the Dirichlet distribution—over class probabilities. 
This approach provides a more expressive and adaptive representation of uncertainty, significantly enhancing UQ generalization and reliability under challenging scenarios. We theoretically establish several advantages of $\mathcal{F}$-EDL and empirically demonstrate its state-of-the-art UQ performance across diverse evaluation settings, including classical, long-tailed, and noisy in-distribution scenarios.
MigGPT: Harnessing Large Language Models for Automated Migration of Out-of-Tree Linux Kernel Patches Across Versions
Authors: Pucheng Dang; Di Huang; Dong Li; Kang Chen; Yuanbo Wen; Qi Guo; Xing Hu
Venue: NeurIPS 2025 (NeurIPS 2025 spotlight)

Abstract: Out-of-tree kernel patches are essential for adapting the Linux kernel to new hardware or enabling specific functionalities. Maintaining and updating these patches across different kernel versions demands significant effort from experienced engineers. Large language models (LLMs) have shown remarkable progress across various domains, suggesting their potential for automating out-of-tree kernel patch migration. However, our findings reveal that LLMs, while promising, struggle with incomplete code context understanding and inaccurate migration point identification. In this work, we propose MigGPT, a framework that employs a novel code fingerprint structure to retain code snippet information and incorporates three meticulously designed modules to improve the migration accuracy and efficiency of out-of-tree kernel patches. Furthermore, we establish a robust benchmark using real-world out-of-tree kernel patch projects to evaluate LLM capabilities. Evaluations show that MigGPT significantly outperforms the direct application of vanilla LLMs, achieving an average completion rate of 72.59\% ($\uparrow 50.74\%$) for migration tasks.
Protein Inverse Folding From Structure Feedback
Authors: Junde Xu; Zijun Gao; Xinyi Zhou; hujie; Xingyi Cheng; Le Song; Guangyong Chen; Pheng-Ann Heng; Jiezhong Qiu
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: The inverse folding problem, aiming to design amino acid sequences that fold into desired three-dimensional structures, is pivotal for various biotechnological applications. 
Here, we introduce a novel approach leveraging Direct Preference Optimization (DPO) to fine-tune an inverse folding model using feedback from a protein folding model.
Given a target protein structure, we begin by sampling candidate sequences from the inverse‐folding model, then predict the three‐dimensional structure of each sequence with the folding model to generate pairwise structural‐preference labels. 
These labels are used to fine‐tune the inverse‐folding model under the DPO objective.  
Our results on the CATH 4.2 test set demonstrate that DPO fine-tuning not only improves sequence recovery of baseline models but also leads to a significant improvement in average TM-Score from 0.77 to 0.81, indicating enhanced structure similarity. 
Furthermore, iterative application of our DPO-based method on challenging protein structures yields substantial gains, with an average TM-Score increase of 79.5\% with regard to the baseline model.
This work establishes a promising direction for enhancing protein sequence design ability from structure feedback by effectively utilizing preference optimization.
Consistent Paths Lead to Truth: Self-Rewarding Reinforcement Learning for LLM Reasoning
Authors: Kongcheng Zhang; QI YAO; Shunyu Liu; Yingjie Wang; Baisheng Lai; Jieping Ye; Mingli Song; Dacheng Tao
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Recent advances of Reinforcement Learning (RL) have highlighted its potential in complex reasoning tasks, yet effective training often relies on external supervision, which limits the broader applicability. In this work, we propose a novel self-rewarding reinforcement learning framework to enhance Large Language Model (LLM) reasoning by leveraging the consistency of intermediate reasoning states across different reasoning trajectories. Our key insight is that correct responses often exhibit consistent trajectory patterns in terms of model likelihood: their intermediate reasoning states tend to converge toward their own final answers (*high consistency*) with minimal deviation toward other candidates (*low volatility*). Inspired by this observation, we introduce CoVo, an intrinsic reward mechanism that integrates ***Co***nsistency and ***Vo***latility via a robust vector-space aggregation strategy, complemented by a curiosity bonus to promote diverse exploration. CoVo enables LLMs to perform RL in a self-rewarding manner, offering a scalable pathway for learning to reason without external supervision. Extensive experiments on diverse reasoning benchmarks show that CoVo achieves performance comparable to or even surpassing supervised RL. Our code is available at https://github.com/sastpg/CoVo.
Boundary-to-Region Supervision for Offline Safe Reinforcement Learning
Authors: Huikang Su; Dengyun Peng; Zifeng Zhuang; YuHan Liu; Qiguang Chen; Donglin Wang; Qinghe Liu
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: Offline safe reinforcement learning aims to learn policies that satisfy predefined safety constraints from static datasets. Existing sequence-model-based methods condition action generation on symmetric input tokens for return-to-go and cost-to-go, neglecting their intrinsic asymmetry: RTG serves as a flexible performance target, while CTG should represent a rigid safety boundary. This symmetric conditioning leads to unreliable constraint satisfaction, especially when encountering out-of-distribution cost trajectories. To address this, we propose Boundary-to-Region (B2R), a framework that enables asymmetric conditioning through cost signal realignment . B2R redefines CTG as a boundary constraint under a fixed safety budget, unifying the cost distribution of all feasible trajectories while preserving reward structures. Combined with rotary positional embeddings , it enhances exploration within the safe region. Experimental results show that B2R satisfies safety constraints in 35 out of 38 safety-critical tasks while achieving superior reward performance over baseline methods. This work highlights the limitations of symmetric token conditioning and establishes a new theoretical and practical approach for applying sequence models to safe RL.
FP4 All the Way: Fully Quantized Training of Large Language Models
Authors: Brian Chmiel; Maxim Fishman; Ron Banner; Daniel Soudry
Venue: NeurIPS 2025 (NeurIPS 2025 spotlight)

Abstract: We demonstrate, for the first time, fully quantized training (FQT) of large language models (LLMs) using predominantly 4-bit floating-point (FP4) precision for weights, activations, and gradients on datasets up to 200 billion tokens. We extensively investigate key design choices for FP4, including block sizes, scaling formats, and rounding methods. Our analysis shows that the NVFP4 format, where each block of 16 FP4 values (E2M1) shares a scale represented in E4M3, provides optimal results. We use stochastic rounding for backward and update passes and round-to-nearest for the forward pass to enhance stability. Additionally, we identify a theoretical and empirical threshold for effective quantized training: when the gradient norm falls below approximately $\sqrt{3}$ times the quantization noise, quantized training becomes less effective. Leveraging these insights, we successfully train a 7-billion-parameter model on 256 Intel Gaudi2 accelerators. The resulting FP4-trained model achieves downstream task performance comparable to a standard BF16 baseline, confirming that FP4 training is a practical and highly efficient approach for large-scale LLM training. A reference implementation is supplied in https://github.com/Anonymous1252022/fp4-all-the-way.
Beyond Benign Overfitting in Nadaraya-Watson Interpolators
Authors: Daniel Barzilai; Guy Kornowski; Ohad Shamir
Venue: NeurIPS 2025 (NeurIPS 2025 poster)

Abstract: In recent years, there has been much interest in understanding the generalization behavior of interpolating predictors, which overfit on noisy training data. Whereas standard analyses are concerned with whether a method is consistent or not, recent observations have shown that even inconsistent predictors can generalize well. In this work, we revisit the classic interpolating Nadaraya-Watson (NW) estimator (also known as Shepard's method), and study its generalization capabilities  through this modern viewpoint. In particular, by varying a single bandwidth-like hyperparameter, we prove the existence of multiple overfitting behaviors, ranging non-monotonically from catastrophic, through benign, to tempered.
Our results highlight how even classical interpolating methods can exhibit intricate generalization behaviors. In addition, for the purpose of tuning the hyperparameter, the results suggest that over-estimating the intrinsic dimension of the data is less harmful than under-estimating it. Numerical experiments complement our theory, demonstrating the same phenomena.