GenAI4ELab/papercli-papers huggingface dataset:
KCLNet: Electrically Equivalence-Oriented Graph Representation Learning for Analog Circuits
Authors: Peng Xu; Yapeng Li; Tinghuan Chen; Tsung-Yi Ho; Bei Yu
Venue: AAAI 2026 (main)

Abstract: Digital circuit representation learning has made remarkable progress in electronic design automation, effectively supporting critical tasks such as testability analysis and logic reasoning. However, representation learning for analog circuits remains challenging due to their continuous electrical characteristics compared to the discrete states of digital circuits. This paper presents a direct current (DC) electrically equivalent-oriented analog representation learning framework, named KCLNet. We will open-source the dataset and code upon publication. It comprises an asynchronous graph neural network structure with electrically-simulated message passing and a representation learning method inspired by Kirchhoff's Current Law (KCL). This method maintains the orderliness of the circuit embedding space by enforcing the equality of the sum of outgoing and incoming current embeddings at each node, which significantly enhances the generalization ability of circuit embeddings. KCLNet offers a novel and effective solution for analog circuit representation learning with electrical constraints preserved. Experimental results demonstrate that our method achieves significant performance in a variety of downstream tasks, e.g., analog circuit classification, subcircuit detection, and circuit edit distance prediction.
scCluBench: Comprehensive Benchmarking of Clustering Algorithms for Single-Cell RNA Sequencing
Authors: Ping Xu; Zaitian Wang; Zhirui Wang; Pengjiang Li; Jiajia Wang; Ran Zhang; Pengfei Wang; Yuanchun Zhou
Venue: AAAI 2026 (main)

Abstract: Cell clustering is crucial for uncovering cellular heterogeneity in single-cell RNA sequencing (scRNA-seq) data by identifying cell types and marker genes. Despite its importance, existing benchmarks for scRNA-seq clustering remain fragmented, lacking standardized protocols and often omitting recent advances in artificial intelligence.To fill these gaps, we present scCluBench, a comprehensive benchmark of clustering algorithms for scRNA-seq data. scCluBench provides 36 scRNA-seq datasets collected from diverse public sources, covering multiple tissues, which are uniformly processed to ensure consistency for systematic evaluation and downstream analyses. To assess performance, we collect and reproduce a range of scRNA-seq clustering methods, including traditional, deep learning-based, graph-based, and biological foundation models. We comprehensively evaluate each method both quantitatively and qualitatively, using core performance metrics and visualization analyses. Furthermore, we construct representative downstream biological tasks, such as marker gene identification and cell type annotation, to further assess the practical utility. scCluBench then investigates the performance differences and applicability boundaries of various clustering models across diverse analytical tasks, systematically assessing their robustness and scalability in real-world scenarios. Overall, scCluBench offers a standardized and user-friendly benchmark for scRNA-seq clustering, with standardized datasets, unified evaluation protocols, and transparent analyses, facilitating informed method selection and providing valuable insights into model generalizability and application scope.
GeoGen: A Two-stage Coarse-to-Fine Framework for Fine-grained Synthetic Location-based Social Network Trajectory Generation
Authors: Rongchao Xu; Kunlin Cai; Lin Jiang; Zhiqing Hong; Yuan Tian; Guang Wang
Venue: AAAI 2026 (main)

Abstract: Location-Based Social Network (LBSN) check-in trajectory data are important for many practical applications like POI recommendation, advertising, and pandemic intervention. However, the high collection costs and ever-increasing privacy concerns prevent us from accessing large-scale LBSN trajectory data. The recent advances in synthetic data generation provide us with a new opportunity to achieve this, which utilizes generative AI to generate synthetic data that preserves the characteristics of real data while ensuring privacy protection. However, generating synthetic LBSN check-in trajectories remains challenging due to their spatially discrete, temporally irregular nature and the complex spatio-temporal patterns caused by sparse activities and uncertain human mobility. To address this challenge, we propose GeoGen, a two-stage coarse-to-fine framework for large-scale LBSN check-in trajectory generation. In the first stage, we reconstruct spatially continuous, temporally regular latent movement sequences from the original LBSN check-in trajectories and then design a Sparsity-aware Spatio-temporal Diffusion model (S^2TDiff) with an efficient denosing network to learn their underlying behavioral patterns. In the second stage, we design Coarse2FineNet, a Transformer-based Seq2Seq architecture equipped with a dynamic context fusion mechanism in the encoder and a multi-task hybrid-head decoder, which generates fine-grained LBSN trajectories based on coarse-grained latent movement sequences by modeling semantic relevance and behavioral uncertainty. Extensive experiments on four real-world datasets show that GeoGen excels state-of-the-art models for both fidelity and utility evaluation, e.g., it increases over 69% and 55% in distance and radius metrics on the FS-TKY dataset.
Learning to Curate Context: Jointly Optimizing Retrieval and Prediction for Multimodal Social Media Popularity
Authors: Xovee Xu; Shuojun Lin; Fan Zhou; Jingkuan Song
Venue: AAAI 2026 (main)

Abstract: Predicting the popularity of user-generated content (UGC) is a crucial but challenging task in social media analysis. While existing retrieval-augmented models enhance predictions by supplying rich contextual information, they remain limited by a fundamental precision-recall dilemma: enlarging the retrieval set increases coverage but introduces noisy, irrelevant context that harms prediction. In this work, we propose a unified framework that learns to retrieve, filter, and predict. Central to our approach is a Mixture-of-Logits-based retrieval module that replaces static similarity metrics with a dynamic, multi-faceted scoring function, enabling the retriever to be directly optimized by the prediction objective. Then an uncertainty-aware filter is designed to perform differentiable subset selection and refine the selected representations using the information bottleneck principle. At last, to enhance predictive robustness, we introduce a confidence-weighted test-time perturbation strategy. By learning to retrieve UGCs that are beneficial for prediction and filtering out uncertainty, our framework provides more relevant and reliable context. Extensive experiments demonstrate that the proposed framework achieves state-of-the-art performance, consistently outperforming strong baselines.
SoMe: A Realistic Benchmark for LLM-based Social Media Agents
Authors: Dizhan Xue; Jing Cui; Shengsheng Qian; Chuanrui Hu; Changsheng Xu
Venue: AAAI 2026 (main)

Abstract: Intelligent agents powered by large language models (LLMs) have recently demonstrated impressive capabilities and gained increasing popularity on social media platforms. While LLM agents are reshaping the ecology of social media, there exists a current gap in conducting a comprehensive evaluation of their ability to comprehend media content, understand user behaviors, and make intricate decisions. To address this challenge, we introduce SoMe, a pioneering benchmark designed to evaluate social media agents equipped with various agent tools for accessing and analyzing social media data. SoMe comprises a diverse collection of 8 social media agent tasks, 9,164,284 posts, 6,591 user profiles, and 25,686 reports from various social media platforms and external websites, with 17,869 meticulously annotated task queries. Compared with the existing datasets and benchmarks for social media tasks, SoMe is the first to provide a versatile and realistic platform for LLM-based social media agents to handle diverse social media tasks. By extensive quantitative and qualitative analysis, we provide the first overview insight into the performance of mainstream agentic LLMs in realistic social media environments and identify several limitations. Our evaluation reveals that both the current closed-source and open-source LLMs cannot handle social media agent tasks satisfactorily. SoMe provides a challenging yet meaningful testbed for future social media agents.
GenePheno: Interpretable Gene Knockout-Induced Phenotype Abnormality Prediction from Gene Sequences
Authors: Jingquan Yan; Yuwei Miao; Lei Yu; Yuzhi Guo; Xue Xiao; Lin Xu; Junzhou Huang
Venue: AAAI 2026 (main)

Abstract: Exploring how genetic sequences shape phenotypes is a fundamental challenge in biology and a key step toward scalable, hypothesis-driven experimentation. The task is complicated by the large modality gap between sequences and phenotypes, as well as the pleiotropic nature of gene–phenotype relationships. Existing sequence-based efforts focus on the degree to which variants of specific genes alter a limited set of phenotypes, while general gene knockout-induced phenotype abnormality prediction methods heavily rely on curated genetic information as inputs, which limits scalability and generalizability. As a result, the task of broadly predicting the presence of multiple phenotype abnormalities under gene knockout directly from gene sequences remains underexplored. We introduce GenePheno, the first interpretable multi-label prediction framework that predicts knockout-induced phenotypic abnormalities from gene sequences. GenePheno employs a contrastive multi-label learning objective that captures inter-phenotype correlations, complemented by an exclusive regularization that enforces biological consistency. It further incorporates a gene function bottleneck layer, offering human-interpretable concepts that reflect functional mechanisms behind phenotype formation. To support progress in this area, we curate four datasets with canonical gene sequences as input and multi-label phenotypic abnormalities induced by gene knockouts as targets. Across these datasets, GenePheno achieves state-of-the-art gene-centric Fmax and phenotype-centric AUC, and case studies demonstrate its ability to reveal gene functional mechanisms.
Sentient: Detecting APTs via Capturing Indirect Dependencies and Behavioral Logic
Authors: Wenhao Yan; Ning An; Wei Qiao; Weiheng Wu; Zhigang Lu; Bo Jiang; Baoxu Liu; Junrong Liu
Venue: AAAI 2026 (main)

Abstract: Advanced Persistent Threats (APTs) are difficult to detect due to their complexity and stealthiness. To mitigate such attacks, many approaches model entities and their relationship using provenance graphs to detect the stealthy and persistent characteristics of APTs. However, existing detection methods suffer from the flaws of missing indirect dependencies, noisy complex scenarios, and missing behavioral logical associations, which make it difficult to detect complex scenarios and effectively identify stealthy threats.
In this paper, we propose Sentient, an APT detection method that combines pre-training and intent analysis. It employs a graph transformer to learn structural and semantic information from provenance graphs to avoid missing indirect dependencies. We mitigate scenario noise by combining global and local information. Additionally, we design an Intent Analysis Module (IAM) to associate logical relationships between behaviors. Sentient is trained solely on easily obtainable benign data to detect malicious behaviors that deviate from benign behavioral patterns.
We evaluated Sentient on three widely-used datasets covering real-world attacks and simulated attacks. Notably, compared to six state-of-the-art methods, Sentient achieved an average reduction of 44% in false positive rate(FPR) for detection.
An LLM-based Quantitative Framework for Evaluating High-Stealthy Backdoor Risks in OSS Supply Chains
Authors: Zihe Yan; Kai Luo; Haoyu Yang; Yang Yu; Zhuosheng Zhang; Guancheng Li
Venue: AAAI 2026 (main)

Abstract: In modern software development workflows, the open-source software supply chain significantly contributes to efficient and convenient engineering practices. With increasing system complexity, it has become a common practice to use open-source software as third-party dependencies. However, due to the lack of maintenance for underlying dependencies and insufficient community auditing, ensuring the security of source code and the legitimacy of repository maintainers has become a challenge, particularly in the context of high-stealth backdoor attacks such as the XZ-Util incident. To address these problems, we propose a fine-grained project evaluation framework for backdoor risk assessment in open-source software. Our evaluation framework models highly stealthy backdoor attacks from the attacker’s perspective and defines targeted metrics for each attack stage. Moreover, to overcome the limitations of static analysis in assessing the reliability of repository maintenance activities, such as irregular committer privilege escalation and insufficient review participation, we employ large language models (LLMs) to perform semantic evaluation of code repositories while avoiding reliance on manually crafted patterns. The effectiveness of our framework is validated on 66 high-priority packages in the Debian ecosystem, and the experimental results reveal that the current open-source software supply chain is exposed to a series of security risks.
Authority Backdoor: A Certifiable Backdoor Mechanism for Authoring DNNs
Authors: Han Yang; Shaofeng Li; Tian Dong; Xiangyu Xu; Guangchi Liu; Zhen Ling
Venue: AAAI 2026 (main)

Abstract: Deep Neural Networks (DNNs), as valuable intellectual property, face unauthorized use. Existing protections, such as digital watermarking, are largely passive; they provide only post-hoc ownership verification and cannot actively prevent the illicit use of a stolen model. This work proposes a proactive protection scheme, dubbed ``Authority Backdoor," which embeds access constraints directly into the model. In particular, the scheme utilizes a backdoor learning framework to intrinsically lock a model's utility, such that it performs normally only in the presence of a specific trigger (e.g., a hardware fingerprint). But in its absence, the DNN's performance degrades to be useless. To further enhance the security of the proposed authority scheme, the certifiable robustness is integrated to prevent an adaptive attacker from removing the implanted backdoor. The resulting framework establishes a secure authority mechanism for DNNs, combining access control with certifiable robustness against adversarial attacks. Extensive experiments on diverse architectures and datasets validate the effectiveness and certifiable robustness of the proposed framework.
HogVul: Black-box Adversarial Code Generation Framework Against LM-based Vulnerability Detectors
Authors: Jingxiao Yang; Ping He; Tianyu Du; Sun Bing; Xuhong Zhang
Venue: AAAI 2026 (main)

Abstract: Recent advances in software vulnerability detection have been driven by Language Model (LM)-based approaches. However, these models remain vulnerable to adversarial attacks that exploit lexical and syntax perturbations, allowing critical flaws to evade detection. Existing black-box attacks on LM-based vulnerability detectors primarily rely on isolated perturbation strategies, limiting their ability to efficiently explore the adversarial code space for optimal perturbations. To bridge this gap, we propose HogVul, a black-box adversarial code generation framework that integrates both lexical and syntax perturbations under a unified dual-channel optimization strategy driven by Particle Swarm Optimization (PSO). By systematically coordinating two-level perturbations, HogVul effectively expands the search space for adversarial examples, enhancing the attack efficacy. Extensive experiments on four benchmark datasets demonstrate that HogVul achieves an average attack success rate improvement of 26.05% over state-of-the-art baseline methods. These findings highlight the potential of hybrid optimization strategies in exposing model vulnerabilities.
Poisoned Distillation: Injecting Backdoors into Distilled Datasets Without Raw Data Access
Authors: Ziyuan Yang; Ming Yan; Yi Zhang; Joey Tianyi Zhou
Venue: AAAI 2026 (main)

Abstract: Dataset distillation (DD) condenses large datasets into smaller synthetic ones to enhance training efficiency and reducing bandwidth. DD enables models to achieve comparable performance to those trained on the raw full dataset, making it popular for data sharing. Existing work shows that injecting backdoors during the distillation process can threaten downstream models. However, these studies assume attackers can have access to the raw dataset and interfere with the entire distillation process, which is unrealistic. In contrast, this work is the first to address a more realistic and concerning threat: attackers may intercept the dataset distribution process, inject backdoors into the distilled datasets, and redistribute them to users. While distilled datasets were previously considered resistant to backdoor attacks, we demonstrate that they remain vulnerable to such attacks. Furthermore, we show that attackers do not even require access to any raw data to inject the backdoors successfully within one minute. Specifically, our approach reconstructs conceptual archetypes for each class from the model trained on the distilled dataset. Backdoors are then injected into these archetypes to update the distilled dataset. Moreover, we ensure the updated dataset not only retains the backdoor but also preserves the original optimization trajectory, thus maintaining the knowledge of the raw dataset. To achieve this, a hybrid loss is designed to integrate backdoor information along the benign optimization trajectory, ensuring that previously learned information is not forgotten. Extensive experiments demonstrate that distilled datasets are highly vulnerable to our attack, with risks pervasive across various raw datasets, distillation methods, and downstream training strategies.
PDE-Driven Spatiotemporal Generative Modeling for Multilead ECG Synthesis
Authors: Yakir Yehuda; Kira Radinsky
Venue: AAAI 2026 (main)

Abstract: Synthesizing realistic 12-lead electrocardiogram (ECG) data is a complex task due to the intricate spatial and temporal dynamics of cardiac electrophysiology. Traditional generative models often struggle to capture the nuanced interdependencies among ECG leads, which are essential for accurate medical analysis. 
In this paper, we propose Physics-Inspired Partial Differential Equation GAN for Multilead ECG Synthesis (PhysioPDE-GAN), a generative framework designed to model the spatiotemporal structure of multilead ECG signals by incorporating physiological priors and spatial constraints directly into the generative process.
By embedding PDE-based representations directly into the generative process, our approach effectively captures both the temporal evolution and spatial relationships between ECG leads. 
We conduct extensive experiments to evaluate the performance of various base classifiers trained on the synthetic 12-lead ECG data generated by PhysioPDE-GAN. These classifiers outperform those trained on data produced by other conventional methods, achieving statistically significant improvements in detecting cardiac abnormalities. Our work highlights the potential of combining PDE-driven cardiac models with advanced generative techniques to enhance the quality and utility of synthetic biomedical datasets.
CrystalDiT: Simple Diffusion Transformers for Crystal Generation
Authors: Xiaohan Yi; Guikun Xu; Zhong Zhang; Liu Liu; Yatao Bian; Xi Xiao; Peilin Zhao
Venue: AAAI 2026 (main)

Abstract: We present CrystalDiT, a diffusion transformer for crystal structure generation that achieves state-of-the-art performance by challenging the trend of architectural complexity. Instead of intricate, multi-stream designs, CrystalDiT employs a unified transformer that imposes a powerful inductive bias: treating lattice and atomic properties as a single, interdependent system. Combined with a periodic table-based atomic representation and a balanced training strategy, our approach achieves 8.78% SUN (Stable, Unique, Novel) rate on MP-20, substantially outperforming recent methods including FlowMM (4.21%) and MatterGen (3.66%). Notably, CrystalDiT generates 63.28% unique and novel structures while maintaining comparable stability rates, demonstrating that architectural simplicity can be more effective than complexity for materials discovery. Our results suggest that in data-limited scientific domains, carefully designed simple architectures outperform sophisticated alternatives that are prone to overfitting.
Frequency Mining Empowered by Text Aggregation: A New Perspective on Document Image Tampering Detection
Authors: Ziqi Yi; Guitao Xu; Shihang Wu; Peirong Zhang; Lianwen Jin
Venue: AAAI 2026 (main)

Abstract: Document image tampering detection faces significant challenges due to the subtle and spatially dispersed nature of tampering traces, which are often confined to localized regions within tampered text. While existing methods leverage frequency domain information to reveal hidden artifacts, they fail to fully exploit the rich frequency spectrum and lack effective mechanisms for aggregating scattered tampering evidence across extended text regions. To overcome these limitations, we propose the Text Aggregation and multi-Frequency Enhancement Network (TAFE-Net). Specifically, to capture more subtle tampering traces, we design a Multi-Frequency Feature Extractor that comprehensively utilizes various proven effective frequency information. In addition, the Visual-Frequency Integration Module and Direction-aware Frequency Decoupling Enhancement module are introduced to aggregate text features in both horizontal and vertical directions within the frequency domain, from coarse to fine granularity, addressing the incomplete detection of tampered text caused by dispersed tampering traces. Experiments on the DocTamper and RTM datasets demonstrate that our approach establishes new state-of-the-art results and maintains superior robustness against various degradations.
MicLog: Towards Accurate and Efficient LLM-based Log Parsing via Progressive Meta In-Context Learning
Authors: Jianbo Yu; Yixuan Li; Hai Xu; Kang Xu; Junjielong Xu; Zhijing Li; Pinjia He; Wanyuan Wang
Venue: AAAI 2026 (main)

Abstract: Log parsing converts semi-structured logs into structured templates, forming a critical foundation for downstream analysis. Traditional syntax and semantic-based parsers often struggle with semantic variations in evolving logs and data scarcity stemming from their limited domain coverage. Recent large language model (LLM)-based parsers leverage in-context learning (ICL) to extract semantics from examples, demonstrating superior accuracy. However, LLM-based parsers face two main challenges: 1) underutilization of ICL capabilities, particularly in dynamic example selection and cross-domain generalization, leading to inconsistent performance; 2) time-consuming and costly LLM querying. To address these challenges, we present MicLog, the first progressive meta in-context learning (ProgMeta-ICL) log parsing framework that combines meta-learning with ICL on small open-source LLMs (i.e., Qwen-2.5-3B). Specifically, MicLog: i) enhances LLMs' ICL capability through a zero-shot to k-shot ProgMeta-ICL paradigm, employing weighted DBSCAN candidate sampling and enhanced BM25 demonstration selection; ii) accelerates parsing via a multi-level pre-query cache that dynamically matches and refines recently parsed templates. Evaluated on Loghub-2.0, MicLog achieves 10.3% higher parsing accuracy than the state-of-the-art parser while reducing parsing time by 42.4%.