EMBO/SourceData huggingface dataset:
Figure legend: "D, E Relative expression of NCED2 and NCED3 in 14-day-old CDF4GR transgenic plants treated with 20 μM β-estradiol or mock treatment for 0, 2, or 4 h. The expression of the corresponding genes in mock-treated plants was set to 1.0. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"CDF4: 817975
NCED2: 827562
NCED3: 820667"
Figure legend: "F, G Relative expression level of NCED2 and NCED3 in 14-day-old CDF4GR transgenic plants treated with 20 μM DEX, 100μM CHX, DEX plus 100μM CHX, or mock. The gene expression in mock-treated plants was set to 1.0. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"CDF4: 817975
NCED2: 827562
NCED3: 820667"
Figure legend: "H Schematic diagram indicating the locations of six DOF motif clusters (D1 to D6) in the NCED2 and NCED3 gene promoters. I ChIP-qPCR analysis of the ability of CDF4 to bind to the promoters of NCED2 and NCED3. An anti-HA monoclonal antibody was used for DNA immunoprecipitation from three-week-old pER8::CDF4-HA transgenic plants. Black bars indicate the enrichment fold-changes normalized to that of ACT2. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t-test. Transient dual-luciferase reporter assay. The pGreenII-0800 LUC construct containing the CDF4 promoter and the p62-SK construct with or without the CDF4 coding region and CDF4-VP16 were transiently co-transformed into Col-0 protoplasts. Firefly luciferase (LUC) and Renilla luciferase (REN) activities were measured after culturing the protoplasts under low light conditions for 16 h. The ProNCED2/3:LUC /Pro35S:REN ratio represents the relative activities of NCED2 and NCED3 transcription. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t-test."
NCBI gene IDs:
"HA: 
LUC: 
luciferase: 
p62: 
ACT2: 821411
CDF4: 817975
NCED2: 827562
NCED3: 820667"
Figure legend: "K Transient dual-luciferase reporter assay. The pGreenII-0800 LUC construct containing the CDF4 promoter and the p62-SK construct with or without the CDF4 coding region and CDF4-VP16 were transiently co-transformed into Col-0 protoplasts. Firefly luciferase (LUC) and Renilla luciferase (REN) activities were measured after culturing the protoplasts under low light conditions for 16 h. The ProNCED2/3:LUC /Pro35S:REN ratio represents the relative activities of NCED2 and NCED3 transcription. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t-test."
NCBI gene IDs:
"LUC: 
luciferase: 
p62: 
CDF4: 817975
NCED2: 827562
NCED3: 820667"
Figure legend: "A-D Transcript levels were determined by qPCR and normalized to AtACT2. (A, C) Localized NCED2 and NCED3 expression in the wild-type senescing leaf. Half-senesced leaves were split into three parts, as shown in Fig. 1A, C. (B, D) NCED2 and NCED3 expression during leaf senescence in the vector control and CDF4- RNAi-1 plants. Transgenic plant leaves were analyzed from 7 to 56 d (d, days after planting). Four independent experiments were conducted. Values are given as mean ± SD, n=4. *p&lt;0.05 by Student's t-test."
NCBI gene IDs:
"ACT2: 821411
CDF4: 817975
NCED2: 827562
NCED3: 820667"
Figure legend: "E Observation of rosette leaf longevity from the 26-day-old vector control, pER8::CDF4, pER8::CDF4 &amp; nced2, pER8::CDF4 &amp; nced3 and pER8::CDF4 &amp; nced2nced3 transgenic plants after 20 μM estradiol induction for two weeks. Phenotype of detached rosette leaves arranged from oldest to youngest. Scale bars indicate 1.5 cm."
NCBI gene IDs:
"CDF4: 817975
nced2: 827562
nced3: 820667"
Figure legend: "(F) SAG12 expression level in rosette leaves at various development stages. Three independent experiments were conducted. Values are given as mean ± SD, n=4. *p&lt;0.05 by Student's t-test."
NCBI gene IDs:
"SAG12: 834629"
Figure legend: "A The senescence phenotype of the vector control, pER8::CDF4 and pER8::CDF4::RNAi detached leaves treated with H2O2 and incubated in the dark for three days. The third leaf in rosettes of 3-week-old plants was detached and incubated in MES buffer (2 mM MES, pH 5.8) treated with 2 mM H2O2 and 20 μM β-estradiol under dark conditions for three days. Picture shows the leaves before and after treatment. Scale bars indicate 1 cm."
NCBI gene IDs:
"CDF4: 817975"
Figure legend: "A Measurement of catalase activity in vector control and CDF4RNAi plants. Ten-day-old green seedlings (&quot;Young&quot;) and the third and fourth rosette leaves from 36-day-old plants (&quot;Old&quot;) were used, respectively. Three independent experiments were conducted. Data are represented as means ± SD, n=3. Student's t test, *p&lt;0.05."
NCBI gene IDs:
"CDF4: 817975"
Figure legend: "D ChIP-qPCR analysis of the relative binding of CDF4 to the promoter of CAT2. An anti-HA monoclonal antibody was used for DNA immunoprecipitation from 32-d-old pER8::CDF4-HA transgenic plants. Black columns indicate the enrichment fold-changes normalized to that of ACT2. Three independent experiments were conducted. Data are represented as means ± SD, n=3. Student's t test, *p&lt;0.05."
NCBI gene IDs:
"HA: 
ACT2: 821411
CDF4: 817975
CAT2: 829661"
Figure legend: "E Transient dual-luciferase reporter assay. The pGreenII-0800 LUC construct containing the CAT2 promoter and the p62-SK construct with or without CDF4 were transiently co-transformed into Col-0 protoplasts. Firefly luciferase (LUC) and Renilla luciferase (REN) activity were measured after culturing the protoplasts under low light conditions for 16 h. six independent experiments were conducted. Values are given as mean ± SD, n=6. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"LUC: 
luciferase: 
p62: 
CDF4: 817975
CAT2: 829661"
Figure legend: "A The senescence phenotypes of five-week-old vector control, proSAG12::CDF4 and proSAG12::CDF4 &amp; 35S::CAT2 plants, from old to young. Scale bars indicate 1.5 cm."
NCBI gene IDs:
"CDF4: 817975
CAT2: 829661
SAG12: 834629"
Figure legend: "B qPCR analysis of the expression of CDF4 and CAT2 in the leaves Four independent experiments were conducted. Values are given as mean ± SD, n=4. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"CDF4: 817975
CAT2: 829661"
Figure legend: "qPCR analysis of the expression of CAT2 in the leaves Four independent experiments were conducted. Values are given as mean ± SD, n=4. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"CAT2: 829661"
Figure legend: "(A) Observation of inflorescences of 7-week-old wild-type (WT) Arabidopsis and the CDF4 transgenic plants. The asterisk represents the flower organ attached along the inflorescence. Scale bar indicates 1.5 cm."
NCBI gene IDs:
"CDF4: 817975"
Figure legend: "Selected abscission-related gene expression levels in (B) WT and proIDA::CDF4 lines by using qPCR analysis. The expression of these selected genes in the wild-type plant is given as 1. The relative expression level represents only the level of expression of the gene relative to the wild type. ACTIN2 was used as the internal control. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"ACTIN2: 821411
CDF4: 817975
IDA: 843208"
Figure legend: "Selected abscission-related gene expression levels in (C) WT and proIDA::CDF4RNAi lines by using qPCR analysis. The expression of these selected genes in the wild-type plant is given as 1. The relative expression level represents only the level of expression of the gene relative to the wild type. ACTIN2 was used as the internal control. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"ACTIN2: 821411
CDF4: 817975
IDA: 843208"
Figure legend: "E Observation of GUS staining activity in the proPGAZAT::GUS and proPGAZAT::GUS &amp; proIDA::CDF4. Scale bar indicates 0.5 cm."
NCBI gene IDs:
"GUS: 
CDF4: 817975
IDA: 843208"
Figure legend: "F ChIP-qPCR analysis of the relative binding of CDF4 to the promoter regions of PGAZAT. An anti-HA monoclonal antibody was used for DNA immunoprecipitation from 6-week-old pER8::CDF4-HA transgenic plants after estradiol induction. Black columns indicate the enrichment fold changes normalized to ACT2. Three independent experiments were conducted. Values are given as mean ± SD, n=3. *p&lt;0.05 by Student's t test."
NCBI gene IDs:
"HA: 
ACT2: 821411
CDF4: 817975
PGAZAT: 818785"
Figure legend: "A. Histograms of spindle angle of GFP-H2B U2OS cells transfected with either GAPDH or Spindly siRNA and filmed on rectangular micropatterns. Cells were filmed 48 hours post-transfection."
NCBI gene IDs:
"GAPDH: 2597
Spindly: 54908"
Figure legend: "B. Mitotic timing of control-depleted U2OS cells or CLIP-170-depleted cells. CLIP-170-depeleted cells are split in two categories; 'aligned' and 'misaligned', relating to the observed chromosome misalignment phenotype"
NCBI gene IDs:
"CLIP-170: 6249"
Figure legend: "C. The histograms of spindle angles for the two different categories of CLIP-170-depleted U2OS cells (Left graph with alignment defect, right graph without alignment defect)."
NCBI gene IDs:
"CLIP-170: 6249"
Figure legend: "D and E. Mitotic timing and spindle angle histograms of control (GAPDH)-depleted U2OS cells and CENP-E-depleted cells."
NCBI gene IDs:
"CENP-E: 1062
GAPDH: 2597"
Figure legend: "A. HeLa cell stably expressing GFP-LGN and transiently expressing RFP-H2B was treated with noscapine to induce chromosome misalignments. Cells were imaged every 5 minutes. The time is relative to NEB. The red arrows indicate cortical regions where the chromosomes are in close proximity to the cell boundaries, accompanied by the displacement of LGN from the cortex."
NCBI gene IDs:
"LGN: 29899
H2B: 8349"
Figure legend: "B. Similar assay as described in supplementary figure 2D was carried out in the presence of a small molecule inhibitor against Aurora-B (ZM447439) in combination with the proteasome inhibitor MG-132 to keep cells arrested in mitosis and in B. with an inhibitor against Plk1 (BI2536). Drugs were added at the same timing as Hoechst, 30 minutes prior to imaging."
NCBI gene IDs:
"Plk1: 5347"
Figure legend: "A. Immunofluorescence images and quantifications of KT-localized Plk1 in U2OS cells after PBIP1 depletion. Cells were either Mock transfected or with PBIP1 siRNA for 72 hours. Cells were treated with nocodazole for 1 hour and fixed. Cells were stained with the centromere marker ACA, Plk1 and DAPI."
NCBI gene IDs:
"PBIP1: 79682"
Figure legend: "B. Representative images and histograms showing the effect of chromosome position on cortical LGN enrichment after 72 hours of Mock and PBIP1 depletion."
NCBI gene IDs:
"PBIP1: 79682"
Figure legend: "C. Live cellimages and histograms of GFP-H2B U2OS cells Mock transfected or with siPBIP1 filmed on rectangular micropatterns in the presence of a CENP-E inhibitor. The spindle angles for both conditions were scored at 32 minutes after NEB."
NCBI gene IDs:
"CENP-E: 1062
PBIP1: 79682
H2B: 8349"
Figure legend: "E) Barplots showing qRT-PCR gene expression levels (mean +/- S.D.) of PTEN, FNDC3B, and STAM genes in control, 4hr and 24hr actinomycin D treated K562 cells. p-value: two-tailed t-test, (*** p &lt; 0.05). The results represent data from 3 technical replicates from 3 independent biological preparations."
NCBI gene IDs:
"FNDC3B: 64778
PTEN: 5728
STAM: 8027"
Figure legend: "F) Gene expression analysis by RT-qPCR of CrizR1 cells treated with the indicated concentrations of bemcentinib for 48h. LOX: P=0.03; SNAI2: P =0.02; VIM: P =0.03."
NCBI gene IDs:
"LOX: 4015
SNAI2: 6591
VIM: 7431"
Figure legend: "D) (Top) Western blot analysis of CrizR1 cells treated with siScrambled or siRNA for CDK7 or CDK9 for 72h. (Bottom) CrizR1 were treated as above, or with DMSO/alvocidib/THZ1 and cells were stained with Annexin V/PI and analysed by flow cytometry for Annexin V+ cells 72h post-transfection (n=2). Annexin siCDK7 P=0.2, siCDK9 P=0.015, alvocidib P=0.0001, THZ1 P =0.004."
NCBI gene IDs:
"CDK7: 1022
CDK9: 1025"
Figure legend: "E) H3122 parental and CrizR1 cells were treated with DMSO, 200nM alvocidib or 250ng/ml actinomycin D for 6 hours. RNA was extracted and the mRNA levels of the indicated genes were quantified by RT-qPCR. CDK1: DMSO vs H3122 DMSO P=0.002, Actinomycin vs DMSO P=0.0003, Alvocidib vs DMSO P=0.0005; CDK2: DMSO vs H3122 DMSO P =0.0001, Actinomycin vs DMSO P&lt;0.0001, Alvocidib vs DMSO P=0.0005; CDK6: DMSO vs H3122 DMSO P =0.0005, Actinomycin vs DMSO P =0.0004, Alvocidib vs DMSO P =0.0004; CDK9: DMSO vs H3122 DMSO P=0.0003, Actinomycin vs DMSO P =0.0002, Alvocidib vs DMSO P =0.0003; CCNB1: DMSO vs H3122 DMSO P=0.02, Actinomycin vs DMSO P=0.0002, Alvocidib vs DMSO P=0.0003; CCNE1: DMSO vs H3122 DMSO P =0.0004, Actinomycin vs DMSO P =0.0004, Alvocidib vs DMSO"
NCBI gene IDs:
"CCNB1: 891
CCNE1: 898
CDK1: 983
CDK2: 1017
CDK6: 1021
CDK9: 1025"
Figure legend: "F) RT-qPCR analysis of MCL-1 and Survivin expression after treatment of CrizR1 cells with 100nM alvocidib, 25nM dinaciclib and 50 nM THZ1. RNA was extracted after 24h of treatment. MCL-1 alvocidib vs control P=0.0001, dinaciclib vs control P=0.0001, THZ1 vs control P =0.0001; Survivin: alvocidib vs control P =0.01, dinaciclib vs control P=0.01, THZ1 vs control P =0.0001."
NCBI gene IDs:
"Survivin: 332
MCL-1: 4170"
Figure legend: "G) (Top) Western blot analysis of CrizR1 cells treated with siScrambled or with a pool of 4 different siRNAs targeting Survivin (siBIRC5). (Bottom) Cells were stained with Annexin V/PI and analysed by flow cytometry for Annexin V+ cells 72h post-transfection. Annexin: early apoptosis P =0.0003, late apoptosis P =0.5, alive P &lt;0.0001."
NCBI gene IDs:
"Survivin: 332
BIRC5: 332"
Figure legend: "H) The CCLE RNA-seq dataset was used and RPKM values were plotted for the Cyclin D1 and Survivn genes, indicating high expression in H3122 cells compared with other LUAD cells."
NCBI gene IDs:
"Survivn: 332
Cyclin D1: 595"
Figure legend: "D) Gene tracks of RNA polymerase II occupancy at the MCL1, BIRC5 (Survivin), CCND1 and MYC genes."
NCBI gene IDs:
"BIRC5: 332
Survivin: 332
CCND1: 595
MCL1: 4170
MYC: 4609"
Figure legend: "E) qPCR of MYC and CCND1 upon treatment of CrizR1 cells with Alvocidib or THZ1 for 6h. The graph represents the mean fold change ± SD. MYC: alvocidib vs DMSO P =0.03, THZ1 vs DMSO P &lt;0.0001; CCND1: alvocidib vs DMSO P =0.001, THZ1 vs DMSO P =0.003."
NCBI gene IDs:
"CCND1: 595
MYC: 4609"
Figure legend: "F) BIM is upregulated upon MYC silencing in CrizR1 cells."
NCBI gene IDs:
"MYC: 4609"
Figure legend: "G) Annexin V assay showing the percentage of apoptotic CrizR1 cells upon MYC downregulation using siRNA. Early apoptosis P =0.002, late apoptosis P=0.04, alive P =0.0008."
NCBI gene IDs:
"MYC: 4609"
Figure legend: "F) qPCR of Survivin (P=0.0009), MCL-1 (P=0.04), MYC (P=0.007) and BIM (P=0.03) in Ste-1 AlectR cells xenografts treated with alvocidib (Control n=6; alvocidib n=4)."
NCBI gene IDs:
"BIM: 10018
Survivin: 332
MCL-1: 4170
MYC: 4609"
Figure legend: "(A) Schematic overview of FMR1, FXR1, FXR2, FMR2 and position of the 8 selected single nucleotide polymorphisms (SNPs). Line represents introns, grey box at the beginning and end of each gene stands for UTR region and red boxes represent exons. Gene structure plots generated using FancyGene (Rambaldi & Ciccarelli, 2009)"
NCBI gene IDs:
"FMR2: 2334
FMR1: 2332
FXR1: 8087
FXR2: 9513"
Figure legend: "(B) Distribution of repeat polymorphism lengths in FMR1 of male GRAS schizophrenia patients and healthy controls. (C) Distribution of repeat polymorphism lengths in FMR2 of male GRAS schizophrenia patients and healthy controls."
NCBI gene IDs:
"FMR2: 2334
FMR1: 2332"
Figure legend: "(A) FXR1 expression in PBMC of individuals carrying the rs2601 GG (low risk; N=16) versus AA genotype (high risk; N=27)."
NCBI gene IDs:
"rs2601: 
FXR1: 8087"
Figure legend: "(B) PBMC microRNA expression was normalized and data is plotted from all 4 miR-181-5p members (miR-181a, b, c, d-5p)."
NCBI gene IDs:
"miR-181: RF00076"
Figure legend: "(C) Sequence homology of all 4 human mature miR-181 species shown together with sequences in the broader fragile X gene family containing binding sites for the miR-181 family (seed matches identified using Target Scan Human and SFOLD). The red letters specify seed sequences and seed matches, respectively. Chromosome positions for each seed sequence and seed match are denoted (human genome assembly GRCh38/hg38)."
NCBI gene IDs:
"miR-181: RF00076"
Figure legend: "(D) Denoted are ΔΔG values for binding of each of the miR-181 family members to different 3'UTR positions. Positions were identified using Target Scan Human and SFOLD and then processed using PITA algorithm to yield the denoted ΔΔG values. ΔΔG is an energetic score, and the more negative its value, the stronger is the expected binding of the microRNA to the given site"
NCBI gene IDs:
"miR-181: RF00076"
Figure legend: "(A) Ventricular weight to tibia length ratio (VW/TL) of littermate control (LC) or cardiomyocyte-specific NCoR1 knockout (CMNKO) mice. n=10:9:12:7."
NCBI gene IDs:
"NCoR1: 20185"
Figure legend: "(A) Western blotting analysis of NCoR1 in neonatal rat ventricular myocytes (NRVMs) transfected with siControl or siNCoR1 for 3 days. siControl indicates control siRNA; siNCoR1, NCoR1 siRNA."
NCBI gene IDs:
"NCoR1: 54299"
Figure legend: "(C) Quantification of the surface area of α-Actinin-positive NRVMs with or without NCoR1 knockdown. A total of 40 NRVMs was randomly chosen from 4 replicate coverslips for each group and used for statistical analysis."
NCBI gene IDs:
"NCoR1: 54299"
Figure legend: "(D) qRT-PCR analysis of Acta1 and Nppa in NRVMs with or without NCoR1 knockdown. n=4:4."
NCBI gene IDs:
"Acta1: 29437
NCoR1: 54299
Nppa: 24602"
Figure legend: "(E) Western blotting analysis of NCoR1-flag in NRVMs infected by control lentivirus (Control) or NCoR1-flag lentivirus (NCoR1-OV) for 4 days."
NCBI gene IDs:
"flag: 
NCoR1: 54299"
Figure legend: "(G) Quantification of the surface area of α-Actinin-positive NRVMs with or without NCoR1 overexpression. A total of 30 NRVMs was randomly chosen from 3 replicate coverslips for each group and used for statistical analysis."
NCBI gene IDs:
"NCoR1: 54299"
Figure legend: "(H) qRT-PCR analysis of Acta1 and Nppa in NRVMs with or without NCoR1 overexpression. n=4:3. Data represent three independent experiments. Two-way ANOVA followed by Bonferoni post-tests was used for statistical analysis."
NCBI gene IDs:
"Acta1: 29437
NCoR1: 54299
Nppa: 24602"
Figure legend: "(A) Representative immunofluorescence staining of α-Actinin in NRVMs transfected with siRNA for 48h and then treated with vehicle (H2O) or PE for another 48h. Scale bar: 50μm. siMEF2a indicates MEF2a siRNA."
NCBI gene IDs:
"MEF2a: 309957"
Figure legend: "(B) Quantification of the surface area of α-Actinin-positive NRVMs with or without knockdown of NCoR1 and/or MEF2a. A total of 15-20 NRVMs was randomly chosen from 3 replicate coverslips for each group and used for statistical analysis."
NCBI gene IDs:
"MEF2a: 309957
NCoR1: 54299"
Figure legend: "(C) Representative immunofluorescence staining of α-Actinin in NRVMs transfected with siRNA for 48h and then treated with vehicle or PE for another 48h. Scale bar: 50μm. siMEF2d indicates MEF2d siRNA."
NCBI gene IDs:
"MEF2d: 81518"
Figure legend: "(D) Quantification of the surface area of α-Actinin-positive NRVMs with or without knockdown of NCoR1 and/or MEF2d. A total of 15-19 NRVMs was randomly chosen from 3 replicate coverslips for each group and used for statistical analysis."
NCBI gene IDs:
"MEF2d: 81518
NCoR1: 54299"
Figure legend: "(E) qRT-PCR analysis of Acta1 and Nppa in NRVMs. n=4. Data represent three independent experiments. Student's t test was used for statistical analysis."
NCBI gene IDs:
"Acta1: 29437
Nppa: 24602"
Figure legend: "(A) Luciferase assays of Acta1 and Nppa promoters in HEK293FT cells transfected with NCoR1-Flag and/or MEF2a-HA or with empty plasmids. Student's t test was used for statistical analysis"
NCBI gene IDs:
"Flag: 
HA: 
MEF2a: 17258
NCoR1: 20185"
Figure legend: "(B) Co-immunoprecipitation (Co-IP) analysis of NCoR1 and MEF2a in HEK293FT cells transfected with full-length NCoR1-Flag and MEF2a-HA."
NCBI gene IDs:
"Flag: 
HA: 
MEF2a: 17258
NCoR1: 20185"
Figure legend: "(E) Luciferase assays of Acta1 and Nppa promoters in HEK293FT cells transfected with full-length MEF2a and domain-specific NCoR1. Student's t test was used for statistical analysis"
NCBI gene IDs:
"MEF2a: 17258
NCoR1: 20185"
Figure legend: "(F) Western blotting analysis of NCoR1-flag in NRVMs infected by control lentivirus (Control) or NCoR1 (1939-2453)-flag lentivirus [NCoR1(1939-2453)-OV] for 4 days."
NCBI gene IDs:
"flag: 
NCoR1: 20185"
Figure legend: "(I) qRT-PCR analysis of Acta1 and Nppa in NRVMs. n=4:4. Data represent three independent experiments. Two-way ANOVA followed by Bonferoni post-tests was used for statistical analysis"
NCBI gene IDs:
"Acta1: 29437
Nppa: 24602"
Figure legend: "(A) ChIP analysis showing enrichment of NCoR1 in MEF2 binding regions on the promoters of Acta1 and Nppa in ventricular samples."
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "(B) ChIP analysis of enrichment of MEF2a on promoters of Acta1 and Nppa in ventricular samples. n=3:3."
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "ChIP analysis of enrichment of HDAC4 (C) on promoters of Acta1 and Nppa in ventricular samples. n=4:4 for (C)"
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "ChIP analysis of enrichment of HDAC5 (D) on promoters of Acta1 and Nppa in ventricular samples. n=3:3 for (D"
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "ChIP analysis of enrichment of , acetylated-Histone 4 (ac-H4) (E) on promoters of Acta1 and Nppa in ventricular samples. , n=3:3"
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "ChIP analysis of enrichment of ac-H3 (F) on promoters of Acta1 and Nppa in ventricular samples. n=3:3"
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "(G) ChIP analysis of RNA Polymerase II enrichment on the transcriptional regions of Acta1 and Nppa in ventricular samples. n=3:3."
NCBI gene IDs:
"Acta1: 11459
Nppa: 230899"
Figure legend: "(A) Western blotting analysis of RIDs of NCoR1 in left ventricular samples from mice infected with AAV9 GFP or AAV9 NCoR1-RIDs (1939-2453)-Flag."
NCBI gene IDs:
"Flag: 
GFP: 
NCoR1: 20185"
Figure legend: "Adult wings from Dl∆β1-2 flies. No defects are detected in wings from Dl∆β1-2/+ (B), Homozygous Dl∆β1-2/ Dl∆β1-2 have extra vein tissue near L5 and uneven L2 veins (arrowheads; C)."
NCBI gene IDs:
"Dl: 42313"
Figure legend: "Microchaetae are arranged in rows on the thorax of control (yw) flies; these become disordered and more dense in Dl∆β1-2/Dl∆β1-2. White rectangle indicates area scored for E Number of microchaetes per central area (white rectangle in D) in the indicated genotypes."
NCBI gene IDs:
"Dl: 42313"
Figure legend: "Representative images of adult females wings in combinations of Dl∆β1-2 with loss of function Delta alleles. In combinations with Dlrev10 (A), Dl∆Exon2 (B), or Df(3R)DlFx3 (C), vein thickening is strongly enhanced (right panels) compared to heterozygous mutants alone (left panels). Vertical square brackets indicate the regions used for vein thickness quantification. Quantification of wing-vein thickness in females of the indicated genotypes. Representative images of adult female wings demonstrate that Dl∆β1-2 rescues the wing notching phenotype, caused by a Notch loss of function allele (N55e11). Horizontal square bracket indicates the L5 vein &quot;delta&quot; at the intersection with the wing margin analyzed in EV2E. Quantification of wing notching in females of the indicated genotypes, Dl∆β1-2 rescues notching in a similar manner to Dlrev10."
NCBI gene IDs:
"Df: 248315
Dl: 42313
Delta: 42313
delta: 42313
Notch: 31293"