DevLan/vispubs huggingface dataset:
CompositingVis: Exploring Interactions for Creating Composite Visualizations in Immersive Environments
Authors: Qian Zhu 0010, Tao Lu 0013, Shunan Guo, Xiaojuan Ma, Yalong Yang 0001
Published at Vis, 2024

Composite visualization represents a widely embraced design that combines multiple visual representations to create an integrated view. However, the traditional approach of creating composite visualizations in immersive environments typically occurs asynchronously outside of the immersive space and is carried out by experienced experts. In this work, we aim to empower users to participate in the creation of composite visualization within immersive environments through embodied interactions. This could provide a flexible and fluid experience with immersive visualization and has the potential to facilitate understanding of the relationship between visualization views. We begin with developing a design space of embodied interactions to create various types of composite visualizations with the consideration of data relationships. Drawing inspiration from people's natural experience of manipulating physical objects, we design interactions based on the combination of 3D manipulations in immersive environments. Building upon the design space, we present a series of case studies showcasing the interaction to create different kinds of composite visualizations in virtual reality. Subsequently, we conduct a user study to evaluate the usability of the derived interaction techniques and user experience of creating composite visualizations through embodied interactions. We find that empowering users to participate in composite visualizations through embodied interactions enables them to flexibly leverage different visualization views for understanding and communicating the relationships between different views, which underscores the potential of several future application scenarios
Compress and Compare: Interactively Evaluating Efficiency and Behavior Across ML Model Compression Experiments
Authors: Angie W. Boggust, Venkatesh Sivaraman, Yannick Assogba, Donghao Ren, Dominik Moritz, Fred Hohman
Published at Vis, 2024

To deploy machine learning models on-device, practitioners use compression algorithms to shrink and speed up models while maintaining their high-quality output. A critical aspect of compression in practice is model comparison, including tracking many compression experiments, identifying subtle changes in model behavior, and negotiating complex accuracy-efficiency trade-offs. However, existing compression tools poorly support comparison, leading to tedious and, sometimes, incomplete analyses spread across disjoint tools. To support real-world comparative workflows, we develop an interactive visual system called COMPRESS AND COMPARE. Within a single interface, COMPRESS AND COMPARE surfaces promising compression strategies by visualizing provenance relationships between compressed models and reveals compression-induced behavior changes by comparing models' predictions, weights, and activations. We demonstrate how COMPRESS AND COMPARE supports common compression analysis tasks through two case studies, debugging failed compression on generative language models and identifying compression artifacts in image classification models. We further evaluate COMPRESS AND COMPARE in a user study with eight compression experts, illustrating its potential to provide structure to compression workflows, help practitioners build intuition about compression, and encourage thorough analysis of compression's effect on model behavior. Through these evaluations, we identify compression-specific challenges that future visual analytics tools should consider and COMPRESS AND COMPARE visualizations that may generalize to broader model comparison tasks..
CSLens: Towards Better Deploying Charging Stations via Visual Analytics —— A Coupled Networks Perspective
Authors: Yutian Zhang, Liwen Xu, Shaocong Tao, Quanxue Guan, Quan Li 0002, Haipeng Zeng
Published at Vis, 2024

In recent years, the global adoption of electric vehicles (EVs) has surged, prompting a corresponding rise in the installation of charging stations. This proliferation has underscored the importance of expediting the deployment of charging infrastructure. Both academia and industry have thus devoted to addressing the charging station location problem (CSLP) to streamline this process. However, prevailing algorithms addressing CSLP are hampered by restrictive assumptions and computational overhead, leading to a dearth of comprehensive evaluations in the spatiotemporal dimensions. Consequently, their practical viability is restricted. Moreover, the placement of charging stations exerts a significant impact on both the road network and the power grid, which necessitates the evaluation of the potential post-deployment impacts on these interconnected networks holistically. In this study, we propose CSLens, a visual analytics system designed to inform charging station deployment decisions through the lens of coupled transportation and power networks. CSLens offers multiple visualizations and interactive features, empowering users to delve into the existing charging station layout, explore alternative deployment solutions, and assess the ensuring impact. To validate the efficacy of CSLens, we conducted two case studies and engaged in interviews with domain experts. Through these efforts, we substantiated the usability and practical utility of CSLens in enhancing the decision-making process surrounding charging station deployment. Our findings underscore CSLens's potential to serve as a valuable asset in navigating the complexities of charging infrastructure planning.
Curio: A Dataflow-Based Framework for Collaborative Urban Visual Analytics
Authors: Gustavo Moreira, Maryam Hosseini, Carolina Veiga, Lucas Alexandre, Nicola Colaninno, Daniel de Oliveira 0001, Nivan Ferreira, Marcos Lage, Fabio Miranda 0001
Published at Vis, 2024

Over the past decade, several urban visual analytics systems and tools have been proposed to tackle a host of challenges faced by cities, in areas as diverse as transportation, weather, and real estate. Many of these tools have been designed through collaborations with urban experts, aiming to distill intricate urban analysis workflows into interactive visualizations and interfaces. However, the design, implementation, and practical use of these tools still rely on siloed approaches, resulting in bespoke systems that are difficult to reproduce and extend. At the design level, these tools undervalue rich data workflows from urban experts, typically treating them only as data providers and evaluators. At the implementation level, they lack interoperability with other technical frameworks. At the practical use level, they tend to be narrowly focused on specific fields, inadvertently creating barriers to cross-domain collaboration. To address these gaps, we present Curio, a framework for collaborative urban visual analytics. Curio uses a dataflow model with multiple abstraction levels (code, grammar, GUI elements) to facilitate collaboration across the design and implementation of visual analytics components. The framework allows experts to intertwine data preprocessing, management, and visualization stages while tracking the provenance of code and visualizations. In collaboration with urban experts, we evaluate Curio through a diverse set of usage scenarios targeting urban accessibility, urban microclimate, and sunlight access. These scenarios use different types of data and domain methodologies to illustrate Curio's flexibility in tackling pressing societal challenges. Curio is available at urbantk.org/curio
D-Tour: Semi-Automatic Generation of Interactive Guided Tours for Visualization Dashboard Onboarding
Authors: Vaishali Dhanoa, Andreas P. Hinterreiter, Vanessa Fediuk, Niklas Elmqvist, Eduard Gröller, Marc Streit
Published at Vis, 2024

Onboarding a user to a visualization dashboard entails explaining its various components, including the chart types used, the data loaded, and the interactions available. Authoring such an onboarding experience is time-consuming and requires significant knowledge and little guidance on how best to complete this task. Depending on their levels of expertise, end users being onboarded to a new dashboard can be either confused and overwhelmed or disinterested and disengaged. We propose interactive dashboard tours (D-Tours) as semi-automated onboarding experiences that preserve the agency of users with various levels of expertise to keep them interested and engaged. Our interactive tours concept draws from open-world game design to give the user freedom in choosing their path through onboarding. We have implemented the concept in a tool called D-TOUR PROTOTYPE, which allows authors to craft custom interactive dashboard tours from scratch or using automatic templates. Automatically generated tours can still be customized to use different media (e.g., video, audio, and highlighting) or new narratives to produce an onboarding experience tailored to an individual user. We demonstrate the usefulness of interactive dashboard tours through use cases and expert interviews. Our evaluation shows that authors found the automation in the D-Tour Prototype helpful and time-saving, and users found the created tours engaging and intuitive. This paper and all supplemental materials are available at https://osf.io/6fbjp/.
DaedalusData: Exploration, Knowledge Externalization and Labeling of Particles in Medical Manufacturing — A Design Study
Authors: Alexander Wyss, Gabriela Morgenshtern, Amanda Hirsch-Hüsler, Jürgen Bernard
Published at Vis, 2024

In medical diagnostics of both early disease detection and routine patient care, particle-based contamination of in-vitro diagnostics consumables poses a significant threat to patients. Objective data-driven decision-making on the severity of contamination is key for reducing patient risk, while saving time and cost in quality assessment. Our collaborators introduced us to their quality control process, including particle data acquisition through image recognition, feature extraction, and attributes reflecting the production context of particles. Shortcomings in the current process are limitations in exploring thousands of images, data-driven decision making, and ineffective knowledge externalization. Following the design study methodology, our contributions are a characterization of the problem space and requirements, the development and validation of DaedalusData, a comprehensive discussion of our study's learnings, and a generalizable framework for knowledge externalization. DaedalusData is a visual analytics system that enables domain experts to explore particle contamination patterns, label particles in label alphabets, and externalize knowledge through semi-supervised label-informed data projections. The results of our case study and user study show high usability of DaedalusData and its efficient support of experts in generating comprehensive overviews of thousands of particles, labeling of large quantities of particles, and externalizing knowledge to augment the dataset further. Reflecting on our approach, we discuss insights on dataset augmentation via human knowledge externalization, and on the scalability and trade-offs that come with the adoption of this approach in practice.
DataGarden: Formalizing Personal Sketches into Structured Visualization Templates
Authors: Anna Offenwanger, Theophanis Tsandilas, Fanny Chevalier
Published at Vis, 2024

Sketching is a common practice among visualization designers and serves an approachable entry to data visualization for non-experts. However, moving from a sketch to a full fledged data visualization often requires throwing away the original sketch and recreating it from scratch. Our goal is to formalize these sketches, enabling them to support iteration and systematic data mapping through a visual-first templating workflow. In this workflow, authors sketch a representative visualization and structure it into an expressive template for an envisioned or partial dataset, capturing implicit style as well as explicit data mappings. To demonstrate our proposed workflow, we implement DataGarden and evaluate it through a reproduction and a freeform study. We investigate how DataGarden supports personal expression and delve into the variety of visualizations that authors can produce with it, identifying cases that demonstrate the limitations of our approach and discussing avenues for future work
Defogger: A Visual Analysis Approach for Data Exploration of Sensitive Data Protected by Differential Privacy
Authors: Xumeng Wang, Shuangcheng Jiao, Chris Bryan
Published at Vis, 2024

Differential privacy ensures the security of individual privacy but poses challenges to data exploration processes because the limited privacy budget incapacitates the flexibility of exploration and the noisy feedback of data requests leads to confusing uncertainty. In this study, we take the lead in describing corresponding exploration scenarios, including underlying requirements and available exploration strategies. To facilitate practical applications, we propose a visual analysis approach to the formulation of exploration strategies. Our approach applies a reinforcement learning model to provide diverse suggestions for exploration strategies according to the exploration intent of users. A novel visual design for representing uncertainty in correlation patterns is integrated into our prototype system to support the proposed approach. Finally, we implemented a user study and two case studies. The results of these studies verified that our approach can help develop strategies that satisfy the exploration intent of users.
DeLVE into Earth's Past: A Visualization-Based Exhibit Deployed Across Multiple Museum Contexts
Authors: Mara Solen, Nigar Sultana, Laura Lukes, Tamara Munzner
Published at Vis, 2024

While previous work has found success in deploying visualizations as museum exhibits, it has not investigated whether museum context impacts visitor behaviour with these exhibits. We present an interactive Deep-time Literacy Visualization Exhibit (DeLVE) to help museum visitors understand deep time (lengths of extremely long geological processes) by improving proportional reasoning skills through comparison of different time periods. DeLVE uses a new visualization idiom, Connected Multi-Tier Ranges, to visualize curated datasets of past events across multiple scales of time, relating extreme scales with concrete scales that have more familiar magnitudes and units. Museum staff at three separate museums approved the deployment of DeLVE as a digital kiosk, and devoted time to curating a unique dataset in each of them. We collect data from two sources, an observational study and system trace logs. We discuss the importance of context: similar museum exhibits in different contexts were received very differently by visitors. We additionally discuss differences in our process from Sedlmair et al.'s design study methodology which is focused on design studies triggered by connection with collaborators rather than the discovery of a concept to communicate. Supplemental materials are available at: https://osf.io/z53dq/
DG Comics: Semi-Automatically Authoring Graph Comics for Dynamic Graphs
Authors: Joohee Kim, Hyunwook Lee, Duc M. Nguyen, Minjeong Shin, Bum Chul Kwon, Sungahn Ko, Niklas Elmqvist
Published at Vis, 2024

Comics are an effective method for sequential data-driven storytelling, especially for dynamic graphs—graphs whose vertices and edges change over time. However, manually creating such comics is currently time-consuming, complex, and error-prone. In this paper, we propose DG COMICS, a novel comic authoring tool for dynamic graphs that allows users to semi-automatically build and annotate comics. The tool uses a newly developed hierarchical clustering algorithm to segment consecutive snapshots of dynamic graphs while preserving their chronological order. It also presents rich information on both individuals and communities extracted from dynamic graphs in multiple views, where users can explore dynamic graphs and choose what to tell in comics. For evaluation, we provide an example and report the results of a user study and an expert review.
DiffFit: Visually-Guided Differentiable Fitting of Molecule Structures to a Cryo-EM Map
Authors: Deng Luo, Zainab Alsuwaykit, Dawar Khan, Ondrej Strnad, Tobias Isenberg 0001, Ivan Viola
Published at Vis, 2024

We introduce DiffFit, a differentiable algorithm for fitting protein atomistic structures into an experimental reconstructed Cryo-Electron Microscopy (cryo-EM) volume map. In structural biology, this process is necessary to semi-automatically composite large mesoscale models of complex protein assemblies and complete cellular structures that are based on measured cryo-EM data. The current approaches require manual fitting in three dimensions to start, resulting in approximately aligned structures followed by an automated fine-tuning of the alignment. The DiffFit approach enables domain scientists to fit new structures automatically and visualize the results for inspection and interactive revision. The fitting begins with differentiable three-dimensional (3D) rigid transformations of the protein atom coordinates followed by sampling the density values at the atom coordinates from the target cryo-EM volume. To ensure a meaningful correlation between the sampled densities and the protein structure, we proposed a novel loss function based on a multi-resolution volume-array approach and the exploitation of the negative space. This loss function serves as a critical metric for assessing the fitting quality, ensuring the fitting accuracy and an improved visualization of the results. We assessed the placement quality of DiffFit with several large, realistic datasets and found it to be superior to that of previous methods. We further evaluated our method in two use cases: automating the integration of known composite structures into larger protein complexes and facilitating the fitting of predicted protein domains into volume densities to aid researchers in identifying unknown proteins. We implemented our algorithm as an open-source plugin (github.com/nanovis/DiffFit) in ChimeraX, a leading visualization software in the field. All supplemental materials are available at osf.io/5tx4q.
DimBridge: Interactive Explanation of Visual Patterns in Dimensionality Reductions with Predicate Logic
Authors: Brian Montambault, Gabriel Appleby, Jen Rogers, Camelia D. Brumar, Mingwei Li, Remco Chang
Published at Vis, 2024

Dimensionality reduction techniques are widely used for visualizing high-dimensional data. However, support for interpreting patterns of dimension reduction results in the context of the original data space is often insufficient. Consequently, users may struggle to extract insights from the projections. In this paper, we introduce DimBridge, a visual analytics tool that allows users to interact with visual patterns in a projection and retrieve corresponding data patterns. DimBridge supports several interactions, allowing users to perform various analyses, from contrasting multiple clusters to explaining complex latent structures. Leveraging first-order predicate logic, DimBridge identifies subspaces in the original dimensions relevant to a queried pattern and provides an interface for users to visualize and interact with them. We demonstrate how DimBridge can help users overcome the challenges associated with interpreting visual patterns in projections
Discursive Patinas: Anchoring Discussions in Data Visualizations
Authors: Tobias Kauer, Derya Akbaba, Marian Dörk, Benjamin Bach
Published at Vis, 2024

This paper presents discursive patinas, a technique to visualize discussions onto data visualizations, inspired by how people leave traces in the physical world. While data visualizations are widely discussed in online communities and social media, comments tend to be displayed separately from the visualization and we lack ways to relate these discussions back to the content of the visualization, e.g., to situate comments, explain visual patterns, or question assumptions. In our visualization annotation interface, users can designate areas within the visualization. Discursive patinas are made of overlaid visual marks (anchors), attached to textual comments with category labels, likes, and replies. By coloring and styling the anchors, a meta visualization emerges, showing what and where people comment and annotate the visualization. These patinas show regions of heavy discussions, recent commenting activity, and the distribution of questions, suggestions, or personal stories. We ran workshops with 90 students, domain experts, and visualization researchers to study how people use anchors to discuss visualizations and how patinas influence people's understanding of the discussion. Our results show that discursive patinas improve the ability to navigate discussions and guide people to comments that help understand, contextualize, or scrutinize the visualization. We discuss the potential of anchors and patinas to support discursive engagements, including critical readings of visualizations, design feedback, and feminist approaches to data visualization
Distributed Augmentation, Hypersweeps, and Branch Decomposition of Contour Trees for Scientific Exploration
Authors: Mingzhe Li 0004, Hamish A. Carr, Oliver Rübel, Bei Wang 0001, Gunther H. Weber
Published at Vis, 2024

Contour trees describe the topology of level sets in scalar fields and are widely used in topological data analysis and visualization. A main challenge of utilizing contour trees for large-scale scientific data is their computation at scale using highperformance computing. To address this challenge, recent work has introduced distributed hierarchical contour trees for distributed computation and storage of contour trees. However, effective use of these distributed structures in analysis and visualization requires subsequent computation of geometric properties and branch decomposition to support contour extraction and exploration. In this work, we introduce distributed algorithms for augmentation, hypersweeps, and branch decomposition that enable parallel computation of geometric properties, and support the use of distributed contour trees as query structures for scientific exploration. We evaluate the parallel performance of these algorithms and apply them to identify and extract important contours for scientific visualization
DITTO: A Visual Digital Twin for Interventions and Temporal Treatment Outcomes in Head and Neck Cancer
Authors: Andrew Wentzel, Serageldin Attia, Xinhua Zhang, Guadalupe Canahuate, Clifton David Fuller, G. Elisabeta Marai
Published at Vis, 2024

Digital twin models are of high interest to Head and Neck Cancer (HNC) oncologists, who have to navigate a series of complex treatment decisions that weigh the efficacy of tumor control against toxicity and mortality risks. Evaluating individual risk profiles necessitates a deeper understanding of the interplay between different factors such as patient health, spatial tumor location and spread, and risk of subsequent toxicities that can not be adequately captured through simple heuristics. To support clinicians in better understanding tradeoffs when deciding on treatment courses, we developed DITTO, a digital-twin and visual computing system that allows clinicians to analyze detailed risk profiles for each patient, and decide on a treatment plan. DITTO relies on a sequential Deep Reinforcement Learning digital twin (DT) to deliver personalized risk of both long-term and short-term disease outcome and toxicity risk for HNC patients. Based on a participatory collaborative design alongside oncologists, we also implement several visual explainability methods to promote clinical trust and encourage healthy skepticism when using our system. We evaluate the efficacy of DITTO through quantitative evaluation of performance and case studies with qualitative feedback. Finally, we discuss design lessons for developing clinical visual XAI applications for clinical end users.