indexpath= "./wiki-index/knn.index" wiki_sentence_path="wikipedia-en-sentences.parquet" #wiki_fulltext_path="wikipedia-en.parquet" import faiss import glob import numpy as np import pandas as pd pd.set_option("display.max_colwidth", 1000) import nltk.data import numpy as np import time import os import torch from transformers import AutoTokenizer, AutoModel tokenizer = AutoTokenizer.from_pretrained('facebook/contriever-msmarco') contriever = AutoModel.from_pretrained('facebook/contriever-msmarco') device = 'cuda' if torch.cuda.is_available() else 'cpu' contriever.to(device) def cos_sim_2d(x, y): norm_x = x / np.linalg.norm(x, axis=1, keepdims=True) norm_y = y / np.linalg.norm(y, axis=1, keepdims=True) return np.matmul(norm_x, norm_y.T) print(device) # Mean pooling def mean_pooling(token_embeddings, mask): token_embeddings = token_embeddings.masked_fill(~mask[..., None].bool(), 0.) sentence_embeddings = token_embeddings.sum(dim=1) / mask.sum(dim=1)[..., None] return sentence_embeddings print("loading df") df_sententces = pd.read_parquet( wiki_sentence_path , engine='fastparquet') #df_fulltext = pd.read_parquet( wiki_fulltext_path , engine='fastparquet') my_index = faiss.read_index(indexpath, faiss.IO_FLAG_MMAP | faiss.IO_FLAG_READ_ONLY) query ="" while query != "q": query=input("Type in your query: ") print("Query Text: ", query) inputs = tokenizer([query], padding=True, truncation=True, return_tensors="pt").to(device) outputs = contriever(**inputs) embeddings = mean_pooling(outputs[0], inputs['attention_mask']) query_vector = np.asarray(embeddings .cpu().detach().numpy()).reshape(1, 768) #print(query_vector.shape) k = 5 distances, indices = my_index.search(query_vector, k) print(f"Top {k} elements in the dataset for max inner product search:") for i, (dist, indice) in enumerate(zip(distances[0], indices[0])): print(f"{i+1}: Vector number {indice:4} with distance {dist}") text = str( df_sententces.iloc[[indice]]['text_snippet'] ) # get embedding of neighboring 3-sentence segments try: inputs = tokenizer([str( df_sententces.iloc[[indice-1]]['text_snippet'] ), str( df_sententces.iloc[[indice]]['text_snippet']), str( df_sententces.iloc[[indice+1]]['text_snippet'] ) ], padding=True, truncation=True, return_tensors="pt").to(device) outputs = contriever(**inputs) embeddings = mean_pooling(outputs[0], inputs['attention_mask']) embeddings = np.asarray(embeddings .cpu().detach().numpy()) #print(embeddings.shape ) #print(cos_sim_2d(embeddings[0].reshape(1, 768), embeddings[1].reshape(1, 768))) if cos_sim_2d(embeddings[0].reshape(1, 768), embeddings[1].reshape(1, 768)) > 0.7: text = str( df_sententces.iloc[[indice-1]]['text_snippet'] ) +" "+ str( df_sententces.iloc[[indice]]['text_snippet'] ) #print(cos_sim_2d(embeddings[1].reshape(1, 768), embeddings[2].reshape(1, 768))) if cos_sim_2d(embeddings[0].reshape(1, 768), embeddings[1].reshape(1, 768)) > 0.7: text += str( df_sententces.iloc[[indice+1]]['text_snippet'] ) except: pass print(text)