2007-11-28 04:49  Robert Hatcher <rhatcher@fnal.gov>

	* DcsUser/: CoilTools.cxx, CoilTools.h:

	New interface static function CoilCurrent(vldc), similar to IsOK()
	and IsReverse(), that returns a pair of floats representing the coil
	current(s).  For the Near, both elements are the same (in case one
	treats the calorimeter and spectrometer portions as different
	supermodules).  For the Far use .first is SM1 and .second is SM2.

2007-11-28 04:21  George Irwin <gmieg@slac.stanford.edu>

	* CVSROOT/: framework.list, users:

	Fix email address for Ed

2007-11-28 04:14  George Irwin <gmieg@slac.stanford.edu>

	* setup/packages-R1.27-tmp:

	Add this for Ed

2007-11-27 20:20  scavan

	* NueAna/NueAnaTools/NueConvention.cxx:

	fixed some comments in the code to make their content more accurate

2007-11-27 16:55  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/Module/ANtpInfoObjectFiller.cxx:


	use more of coil tools

2007-11-27 16:54  ahimmel

	* NuMuBar/tools/RunConcatenation.sh:



	Script to automatically concatenate a group of small files into ~1.5 GB files.

2007-11-27 16:36  rmehdi

	* NuMuBar/macros/ptsim/ptsim_G3_eggplant.C:

	ptsim_G3_eggplantSAM.C

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/sei_init.pm:

	Add "globus" service.

	Add 2 new SEI lookup tables:
	  <se_name>;<request> -> <authentication method>
	  <command>           -> <local file prefix>

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/sei_get_remote_catalogues.pm:

	Cosmetic: Force number of hours to be integral.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/sei_assemble_command.pm:

	Handle local file prefix.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/: main.pm,
	  sei_check_authentication.pm, sei_get_server_cmd.pm:

	Check for command authentication.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/init.pm:

	Add 2 new SEI lookup tables:
	  <se_name>;<request> -> <authentication method>
	  <command>           -> <local file prefix>

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/: frs_collect_file_list.pm,
	  minos/frs_locate_file.pm:

	Cosmetic change to stdout to avoid long lines that tend to wrap and
	reduce readability.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/docs/dcm.html:

	Document case where command requires local prefix.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/dcm_frs_job.pm:

	If not command available to check file size, just warn and hope for
	the best.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/config/:
	  minos.site_oxford_t2_ui.se_access,
	  minos.site_ral_t1_ui.se_access:

	Record those requests which require authentication.

2007-11-27 16:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/config/minos.se_servers:

	Add "globus" service.

2007-11-27 14:04  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder-impl.cxx,
	  NCContourFinder.cxx, NCContourFinder.h:

	Add a function to evaluate the chisq surface over a low-res grid in all the parameters.

2007-11-27 11:14  bckhouse

	*
	  Production/Cedar_phy/MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C:

	Correct name of the path is "Reco1" not "Spill" - now muonremoval path should successfully attach...

2007-11-27 07:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/data_lfc_lcg.html:

	Add not about work to decouple lcg-utils from LFC

2007-11-27 07:46  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/links.html:

	Add some more Glite/WMS links

2007-11-27 07:46  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/problems.html:

	Update section 'Monitoring and Debugging Jobs'

2007-11-26 19:26  Robert Hatcher <rhatcher@fnal.gov>

	*
	  Contrib/rhatcher/gminos_jobs/gminos_cfg_L250200_bhcurv_overlay.py:

	The real overlay numbers for L250200 under daikon_04 (w/ NDBEDROCK).

2007-11-26 19:24  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/gminos_site_minos12.py:

	prepare to use minos12 just like minos13.

2007-11-26 19:23  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/gminos_site_minos13.py:

	pull out the bfld 'rev' (or not) flag before tacking on special name
	info to work directory (or every run ending with 2 is flagged reversed).

2007-11-26 17:41  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolationJK_fit.cxx,
	  NCExtrapolationMQ.cxx:

	Change function arguments back to old names - eliminating last trace of dmsq hack.

2007-11-26 17:34  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/: NCExtrapolation.cxx,
	  NCExtrapolationJK_fit.cxx, NCExtrapolationMQ.cxx:

	scale the value of the delta m^2 in the Coords vector by 1.e-3 in
	NCExtrapolation::SetParametersForOscillationFit().  remove hacks to do this
	in the derived classes.

2007-11-26 17:11  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/framework.list:

	remove tom o. from spam list at his request.

2007-11-26 16:39  nwest

	* GridTools/docs/problems.html:

	Add Jobs abort when short term proxy expires despite long term MyProxy

2007-11-26 16:27  asousa

	* NCUtils/Extrapolation/NCEnergyBin.cxx:

	Removing arithmetic exceptions due to sqrt of negative number.

2007-11-26 15:24  scavan

	*
	  Production/Cedar_phy/MRCC/reco_MC_daikon_near_MRCCOnly_cedar_phy.C:

	added script to make a ntupleMRNT file from an existing Cand file

2007-11-26 15:20  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:


	In ls("v") use TGeoManager list of "unique" volumes instead of full
	volume list to avoid repetitive printing of multi-volumes.

2007-11-26 15:16  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.h:

	Remove obsolete constructor from GetChiSqrFromDerived

2007-11-26 14:34  bckhouse

	* Production/Dogwood/headers/far_mc/far_mc_set_msg_levels.h:

	Minor tidying.

2007-11-26 13:44  bckhouse

	* NCUtils/Extrapolation/NCContourFinder.h:

	Remove a ClassImp accidentally left in.

2007-11-26 09:27  nwest

	* GridTools/docs/ChangeLog:

	Scripts: Add support for Test Releases.

2007-11-26 09:27  nwest

	* GridTools/Scripts/setup/install_test_release_from_tar.perl:

	Script to install a Test Release from a tar file (either from the
	input sandbox or from the web).

2007-11-26 09:27  nwest

	* GridTools/Scripts/setup/create_test_release_tar.perl:

	Change tar file name and organisation.
	Insure it contains .base_release

2007-11-26 09:26  nwest

	* GridTools/Scripts/jobs/run_test_job.perl:

	Don"t delete work directory, user probably hasn"t finished with it.

2007-11-26 09:26  nwest

	* GridTools/Scripts/jobs/: demo_test_release_setup_job.sh,
	  demo_test_release_setup_job.tar.gz,
	  demo_test_release_setup_job_sbox.jdl,
	  demo_test_release_setup_job_url.jdl:

	Demo files for Test Release installation.

2007-11-26 09:26  nwest

	* GridTools/Scripts/jobs/demo_loon_job_nfs.sh:

	Fix typo in comments.

2007-11-26 09:26  nwest

	* GridTools/Scripts/docs/Scripts.html:

	Add section: Installing a Test Release on a Worker Node

2007-11-26 09:26  nwest

	* GridTools/: DataCacheManager/init.pm,
	  DataCacheManager/docs/dcm.html, Ganga/GBS/docs/gbs_design.html,
	  Ganga/GBS/docs/gbs_index.html,
	  Ganga/GBS/docs/gbs_programmer.html, Ganga/GBS/docs/gbs_user.html,
	  Ganga/GBS/python/bootstrap.py,
	  RemoteSoftwareDeployment/doc/rsd.html,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  Scripts/maintenance/version_number:

	Update version number to V01-01-00

2007-11-26 01:14  Robert Hatcher <rhatcher@fnal.gov>

	* GeoGeometry/GeoMediumMap.cxx:

	under gcc 4.1 assert() isn't brought in implicitly by some other header;
	add an explicit #include <cassert>.

2007-11-25 17:26  Brett Viren <bv@bnl.gov>

	* BeamDataDbi/scripts/: data-to-dbu.sh, dbu.C, dbu_peds.C,
	  run_bdbu.sh:

	Minor minos-beamdata mods made many moments mago.

2007-11-25 14:17  hartnell

	* NuMuBar/: NuDSTAna.cxx, NuDSTAna.h:


	Pulled out my hacks to deal with the lack of beam data in the ntuple
	and put them in separte functions:

	void NuDSTAna::OverwriteSntpBeamDataInNtuple(NuEvent& nu)
	void NuDSTAna::OverwriteCoilDataInNtuple(NuEvent& nu)

	Also, now use the NuCounter to count up the POTs in the ntuple when
	making vs time plots.

	One advantage of doing all this is that now there is a cross-check
	that the beam data from the database and the sntp files agree.

2007-11-25 13:57  hartnell

	* NuMuBar/NuAnalysis.cxx:


	Fill the new potSinceLastEventGood/BadDB variables.

2007-11-25 13:54  hartnell

	* NtupleUtils/: NuEvent.cxx, NuEvent.h:


	Added:
	  potSinceLastEvtGoodDB=0;
	  potSinceLastEvtBadDB=0;

2007-11-25 12:43  hartnell

	* NtupleUtils/: NuCounter.cxx, NuCounter.h:


	Added a variable to count the number of good pots from the database.

2007-11-25 12:01  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/setup/create_test_release_tar.perl:

	Add utility to assemble a tar file from the current Test Release

2007-11-25 11:52  hartnell

	* NuMuBar/NuBase.cxx:


	Can't test the existence of a file in dcache with
	ifstream fileOpenOk((*file).c_str());
	so don't try.

2007-11-25 11:31  hartnell

	* NuMuBar/NuDSTAna.h:


	and here

2007-11-25 11:31  hartnell

	* NuMuBar/NuDSTAna.cxx:


	Pull sanity check on all concatenated files using the same analysis
	version in to its own function.

2007-11-25 10:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/problems.html:

	Extend section on external data access to ask about best protocols.

2007-11-25 10:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/: glossary.html, index.html:

	Add entry: Pools Accounts.

2007-11-25 10:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/: data_castor.html, data_tutorial.html:

	Move section on File Ownership from Castor to Accessing Storage
	Elements Tutorial and expand it.

2007-11-25 10:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/data_advice.html:

	Add link to Accessing Storage Elements Tutorial: File Ownership

2007-11-25 08:46  hartnell

	* NuMuBar/: NuDSTAna.cxx, NuDSTAna.h:


	Moved IsInFidVolTrueEvt over to NuCuts.cxx

2007-11-25 08:45  hartnell

	* NtupleUtils/: NuCuts.cxx, NuCuts.h:


	Added: IsInFidVolTrueEvt(const NuMCEvent& mc). It was in NuMuBar
	previously.

2007-11-25 06:11  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: testGeoDraw.C, testGeoDrawCalDet.C,
	  testGeoDrawNearDet.C:


	Modify testGeoDraw.C to illustrate use of UgliLoanPool configuration
	parameter SwimMethodLowField to activate swimming through the low
	field media.

2007-11-25 05:51  Sue Kasahara <schubert@hep.umn.edu>

	* UgliGeometry/UgliLoanPool.cxx:


	Add new configuration parameters with default settings:
	  r.Set("SwimMethodHighField",   Geo::kRungeKutta);
	  r.Set("SwimMethodLowField",    Geo::kNoSwim);
	to allow user configuration of swim method associated with detector
	components designated as "low field" (scint pln, mdl, strips and air gaps)
	or "high field" (steel and coil region) regions.

2007-11-25 04:14  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoGeometry.cxx, GeoGeometry.h,
	  GeoScintMdlVolume.cxx, GeoScintPlnVolume.cxx, GeoShieldGroup.cxx,
	  GeoSteelPlnVolume.cxx, GeoStripVolume.cxx:


	Modify GeoGeometry class to:
	1)Add GeoMediumMap data member.  GeoGeometry constructs GeoMediumMap
	for its vldcontext.
	2)Remove BuildMaterials method since constructions of mediums/materials
	is now handled by GeoMediumMap.
	3)Make use of GeoMediumMap for assigning of mediums for mars,hall,linr,
	plane pair bounding boxes & air gaps, and coil region in the air gaps.
	4)Add new options 'd' and 'v' to GeoGeometry::ls(Option_t* option) method:
	  // Argument: option string is a concatenated list of char options, where:
	  //           "m" => print list materials
	  //           "M" => print list of mediums
	  //           "d" => print MediumMap detector components and associated
	  //                  mediums and swim methods
	  //           "v" => print list of volume names and associated mediums

2007-11-25 03:54  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoScintMdlVolume.cxx, GeoScintMdlVolume.h,
	  GeoScintPlnVolume.h:


	Use GeoMediumMap to determine mediums to be assigned to scint module
	components.

2007-11-25 03:51  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoScintPlnVolume.cxx, GeoScintPlnVolume.h:


	Use GeoMediumMap to determine medium to be assigned to scint planes
	and scint plane coil region components.

2007-11-25 03:45  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoSteelPlnVolume.cxx, GeoSteelPlnVolume.h:


	Use GeoMediumMap to determine medium to be assigned to steel plane
	and steel plane coil region components.

2007-11-25 03:40  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoShieldGroup.cxx:


	Make use of GeoMediumMap to assign medium for shield group boxes.

2007-11-25 03:37  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoStripVolume.cxx, GeoStripVolume.h:


	Make use of GeoMediumMap to determine medium assigned to volume.

2007-11-25 03:26  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/LinkDef.h:


	New class GeoMediumMap.

2007-11-25 03:25  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoMediumMap.cxx, GeoMediumMap.h:


	New class to build medium and material definitions, and to manage
	associations between detector components and mediums.
	Three mediums are created for every material:
	   1)medbasename_B0 =>No field
	   2)medbasename_B1 =>Swim with Runge-Kutta method (high gradient field)
	   3)medbasename_B2 =>Swim with Stepwise-Helix method (low gradient field)
	A map is built with a default set of detector component,
	medium pairs.  The assigned medium for a detector component has
	an appropriate swim method for the field strength in that detector component,
	where the field strength assigned to a component is none,low, or high.
	The swim method to be used for a given field strength is configurable.

2007-11-25 02:36  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: Geo.cxx, Geo.h:


	New enumerated type ESwimMethod:
	  enum ESwimMethod {
	    // Bfield swim method.  Assigned to medium and used to determine
	    // transport model used to swim particles through that medium in VMC.
	    kNoSwim,  // no b-field
	    // Runge-Kutta method recommended for fields with a strong gradient.
	    kRungeKutta,
	    // Step-wise helix method recommended for fields with a small gradient.
	    // Tracking is performed along helix for each step, assuming a
	    // constant B-field with the value of the step mid-point.
	    // Better performance than kRungeKutta.
	    kStepHelix,
	    kUnknownSwimMethod
	  };
	Remove EBFieldType.
	Add additional detcomponents to EDetComponent to cover veto shield.

2007-11-24 23:17  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/problems.html:

	Add Retrieving data from the GRID

2007-11-24 23:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/jobs_advice.html:

	Add How do I direct my job to a specific queue?

2007-11-24 23:15  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/docs/dcm.html:

	Document propagation of master catalogue to slaves via the web

2007-11-24 18:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/ChangeLog:

	Minor RSD updates

2007-11-24 18:20  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/jobs/: cp_nfs_to_se_in_transit.jdl,
	  rm_from_se_in_transit.jdl:

	Example JDL files to copy RAL NFS files to external UI

2007-11-24 18:18  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/jobs_advice.html:

	Populate section on job submission

2007-11-24 18:17  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/jobs_edg.html:

	Add link to GRID Job Status table

2007-11-24 18:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/: fixed_problems.html, problems.html:

	Expire existing problems (not looked at for long time), to make way for a fresh crop

2007-11-24 18:14  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/jobs/run_test_job.perl:

	Don't clear work dir if job failed.  Return output to work directory

2007-11-24 18:12  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/docs/ganga.html:

	Add note about --all-deps --force to remove dependencies on local libraries

2007-11-24 14:57  hartnell

	* NuMuBar/: NuDSTAna.cxx, NuDSTAna.h:


	Make sure that the correct analysisVersion is used in all the
	functions. There is now a sanity check on this throughout.

	The loops over the truth weren't doing the right thing until today but I
	don't think that has mattered.

2007-11-24 13:56  hartnell

	* NuMuBar/: NuAnalysis.cxx, NuDSTAna.cxx, NuPlots.cxx:


	Adapt to API change in IsInFidVol().

2007-11-24 13:55  hartnell

	* NtupleUtils/: NuCuts.cxx, NuCuts.h:


	Finally bite the bullet and remove the use of NuEvent entirely from
	IsInFidVol(). This makes it more easily used.

2007-11-24 12:18  hartnell

	* NuMuBar/: NuAnalysis.cxx, NuDSTAna.cxx, NuDSTAna.h:


	Now call the same TrueEvtInTrueFidVol() function for all the loops over
	the truth events.

2007-11-24 11:55  hartnell

	* NtupleUtils/NuCuts.cxx:


	Rationalise IsInFidVolTrk() so that it calls IsInFidVol(). Should have
	done this ages ago... it is much safer now, different functions can't
	get out of sync and the cuts on the true FV also use the same cuts.

2007-11-24 11:28  hartnell

	* NtupleUtils/: NuCuts.cxx, NuCuts.h:


	Remove fid vol cuts that are no longer used:

	Bool_t IsInFidVol(const NtpSRTrack& trk,const NuEvent& event) const;
	Bool_t IsInFidVol(const NtpSREvent& evt,const NuEvent& event) const;

2007-11-24 11:26  hartnell

	* NtupleUtils/NuDemoModule.cxx:


	Adapt to change of API in cuts

2007-11-24 10:11  hartnell

	* NuMuBar/: NuAnalysis.cxx, NuDSTAna.cxx:


	Minor mods

2007-11-24 09:33  hartnell

	* NtupleUtils/NuCuts.cxx:


	Use the new FD NuMuBar fiducial volume that Justin set up. It is the
	same as the CC 2.5e20 one except that it has an additional coil hole cut
	of r>0.4m.

2007-11-24 09:11  hartnell

	* NuMuBar/: NuDSTAna.cxx, NuDSTAna.h:


	In the process of adding potSinceLastEvtDB I pulled out the
	"potSinceLastEvt*" counters from several places and put them in a
	function.

2007-11-23 23:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/driver/survey_and_clean_up.pm:

	Add --max_safe_purge_frac=<f> to override safe limit.
	Cosmetic tidy up of survey output.

2007-11-23 23:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/driver/cmd_install.pm:

	Bug fix: missing }.

2007-11-23 23:36  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/: doc/rsd.html,
	  driver/help.txt, driver/initialise_globals.pm,
	  driver/parse_command.pm:

	Add --max_safe_purge_frac=<f> to override safe limit.

2007-11-23 19:27  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Minor renaming.

2007-11-23 19:13  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder-impl.cxx,
	  NCContourFinder.cxx, NCContourFinder.h, NCExtrapolation.cxx,
	  NCExtrapolation.h:

	Merge minuit contour finder into the same function.

2007-11-23 18:36  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Merge the simple and hybrid methods into one function.

2007-11-23 18:35  hartnell

	* NtupleUtils/doc/runTheCode.html:


	More mutterings...

2007-11-23 18:19  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/driver/cmd_install.pm:

	Improve diagnostic printout when skipping validation step

2007-11-23 18:12  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/: doc/rsd.html,
	  driver/cmd_install.pm:

	--soft_link option bypasses install entirely if application exists and not --force.

2007-11-23 18:12  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Move simple and hybrid 1D and 2D projections into seperate functions.

2007-11-23 18:03  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolationNS.cxx,
	  NCExtrapolationRS.cxx:

	Comment out unused variables to avoid warnings.

2007-11-23 17:57  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Split out Hybrid and Simple minimum- and contour-finding into their own functions.

2007-11-23 17:45  hartnell

	* NuMuBar/macros/microDstCSS.C:


	Add a macro specifically to make the CSS micro DSTs.

2007-11-23 17:31  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Remove the old-style no-minuit contours and various cruft associated with it.

2007-11-23 17:15  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.cxx, NCContourFinder.h,
	  NCExtrapolation.cxx:

	Add 1D and 2D projections to the simple contour finder.

2007-11-23 16:09  asousa

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  macros/nearFarExtrapolationSystExtMC.C:

	Fixes due to name changes needed for the systematics study.

2007-11-23 16:01  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_neugen3.sh:

	Run make_table from current directory (thanks Brett). Actually do validation check on log file.

2007-11-23 15:44  bckhouse

	* NCUtils/Extrapolation/NCContourFinder.cxx:

	Simple method: remember previous best-fit point and start from there - speeds up contours considerably.

2007-11-23 15:24  vahle

	* CalDetDST/UberRecord.cxx:

	Be quiet!

2007-11-23 15:22  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder-impl.cxx,
	  NCContourFinder.cxx, NCContourFinder.h, NCExtrapolation.cxx:

	Add contours to the simple method.

2007-11-23 14:01  hartnell

	* NuMuBar/NuAnalysis.cxx:


	Can now handle any old MC file name. Just assume that it's L010185 and
	print an error message.

2007-11-23 12:26  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Factor out the logic of which 1D projections to make into a new function GetUniqueAxes()

2007-11-23 12:20  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.cxx, NCContourFinder.h,
	  NCExtrapolation.cxx, NCExtrapolation.h:

	Renable the no minuit fitting (rebranded as Simple fitting) using a new algorithm. Currently only finds minima, not contours.

2007-11-23 10:10  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/docs/ganga.html:

	Fix broken link to home page

2007-11-23 10:09  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/glossary.html:

	Record our LFC server, so that when IS looses it (as it has now) we can still set LFC_HOST

2007-11-23 10:08  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/jobs_advice.html:

	More advice from Philip about splitting/merging stdout/stderr

2007-11-23 10:07  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/data_srm.html:

	Record minor progress with srmcp

2007-11-23 10:06  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/DataCacheManager/config/minos.site_oxford_t2_ui.se_access:

	Re-order: RAL SE, RAL NFS disk, FNAL so that DCM tries RAL before FNAL

2007-11-23 08:38  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/: DataCacheManager/get_site_info.pm,
	  RemoteSoftwareDeployment/driver/get_site_info.pm:

	Add t2ui as Oxford T2 UI

2007-11-22 20:50  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/config/:
	  minos.site_ralppd_ui.local_disks, minos.site_ralppd_ui.se_access:

	Add Tobi's config files for RAL PPD

2007-11-22 18:22  asousa

	* NCUtils/macros/nearFarExtrapolationSystExtMC.C:

	Updates to macro to run withe the latest code.

2007-11-22 16:58  bckhouse

	* NCUtils/Extrapolation/NCContourFinder.h:

	Remove the ClassDef again - it was just causing trouble.

2007-11-22 16:34  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/ChangeLog:

	Report minor changes to all GridTools.

2007-11-22 16:34  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Remove /afs/fnal.gov/files/code/e875/general/minossoft from list of
	candidate s/w stack tops, it only serves to confuse.

2007-11-22 16:34  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/docs/Scripts.html:

	Add section "Installing GridTools and supporting applications"

2007-11-22 16:34  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/docs/dcm.html:

	Merge Installation and Configuration sections.

	Give full worked example for MINOS.

2007-11-22 15:56  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder-impl.cxx,
	  NCContourFinder.cxx, NCContourFinder.h, NCExtrapolation.cxx:

	Really commit declarations.

2007-11-22 15:27  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.cxx, NCExtrapolation.cxx:

	Tidy up logic in NCExtrapolation.
	More declarations.

2007-11-22 14:59  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.cxx, NCContourFinder.h,
	  NCExtrapolation.cxx, NCExtrapolation.h:

	Include more template declarations.

2007-11-22 14:21  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Use the same Minuit derived class for the full-Minuit fit as for the hybrid.

2007-11-22 14:12  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Reenable the full-Minuit contours.

2007-11-22 13:37  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder-impl.cxx,
	  NCContourFinder-impl.h:

	Have to explicitly declare all template instantiations for the code to succesfullly link. Sometimes I hate C++.

2007-11-22 11:21  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/cmd_survey.pm:

	Whoops - remove a debug hack!

2007-11-22 10:33  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Add  $MOG_TOOLS/../GridApps to list of possible software stack tops

2007-11-22 10:31  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/config/example.config:

	Remove Rutherford bias

2007-11-22 10:30  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/DataCacheManager/cmd_survey.pm:

	Don't survey any SE that provides a catalogue service to this site.

2007-11-21 22:10  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Temporarily disable the full-Minuit contours, to get the code to compile.

2007-11-21 18:45  hartnell

	* NuMuBar/macros/FileListSpecial.C:


	Nothing important

2007-11-21 18:40  hartnell

	* NuMuBar/macros/FileListSpecial.C:


	Use SRT_PRIVATE_CONTEXT to find the NuMuBar directory and assume that
	the files are in there

2007-11-21 18:39  hartnell

	* NuMuBar/macros/mEnergy.C:


	A few updates

2007-11-21 18:38  hartnell

	* NuMuBar/macros/mVsTime.C:


	Updates

2007-11-21 17:01  arms

	* Contrib/rhatcher/gminos_jobs/: umn_clean_flux_nfs.sh,
	  umn_clean_wrkdirs.sh, umn_copy_flux_nfs.sh, umn_mkfluxln.sh:

	Update umn scripts for nfs manipulation of flux seeding to/from farm nodes

2007-11-21 15:51  hartnell

	* NuMuBar/macros/vsTime.C:


	Macro to make histograms of many quantities vs time.

2007-11-21 15:48  hartnell

	* NuMuBar/macros/mVsTime.C:


	Added certain checks that the histograms exist.

2007-11-21 15:48  hartnell

	* NuMuBar/tools/farm.pl:


	Added code to process cedar_phy_oldbhcurv

2007-11-21 15:47  hartnell

	* NuMuBar/tools/sam.pl:


	Add some functions to get FD spill data from SAM.

2007-11-21 15:46  hartnell

	* NuMuBar/tools/timeLine.pm:


	Added start time for RunIII

2007-11-21 15:45  hartnell

	* NtupleUtils/NuExtraction.cxx:


	Extract the beam pot value from the database:
	nu.potDB=bs->fTortgt;

2007-11-21 15:41  hartnell

	* NtupleUtils/NuCuts.cxx:


	Remove the assert on IsGoodBeam, just be very noisy instead.

2007-11-21 15:37  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.cxx, NCContourFinder.h,
	  NCExtrapolation.cxx:

	Rename NCExtrapolationMinuit to MinuitForCallable.

2007-11-21 15:19  hartnell

	* NtupleUtils/: NuEvent.cxx, NuEvent.h:


	Added two new variables:

	Float_t potDB;//pot in current spill from database
	Float_t potSinceLastEvtDB;//uses database version of pots

	Also, changed the majority curvature variables to be stored as floats
	rather than doubles to save space. I hope ROOT's schema evolution can
	handle this...

2007-11-21 15:13  hartnell

	* NuMuBar/: NuConfig.cxx, NuConfig.h:


	Added new variable: overrideBeamDataConfigExtraction to deal with the
	case of no beam data in the sntp files.

2007-11-21 15:11  hartnell

	* NuMuBar/NuAnalysis.cxx:


	Added the ability to override the use of beam data to determine the
	configuration (e.g. naming the output file and determining the PDFs to
	use in PIDs).

	Also, now extracting the pot info from the database and filling
	potDB. This is then used to fill another new variable called
	potSinceLastEvtDB. Need this in order to get the pot counting right
	when the beam data info is not in the sntp files.

2007-11-21 15:10  bckhouse

	* NCUtils/Extrapolation/NCContourFinder.cxx:

	Switch MSG macros to NCContourFinder.

2007-11-21 15:04  hartnell

	* NuMuBar/macros/dstAnaCC.C:


	This was running the NuMuBar analysis not the CC analysis... correct now.

2007-11-21 14:42  rodriges

	* Contrib/pidtf/DataMCPlots/: runDataMC_AB.C, runDataMC_NS.C,
	  runDataMC_RO.C, wrapper_AB.C, wrapper_NS.C, wrapper_RO.C:

	Remove some obsolete files

2007-11-21 14:39  rodriges

	* Contrib/pidtf/DataMCPlots/: HistMaker.cxx, HistMaker.h,
	  POTCounter.C, README, runDataMC.C, wrapper.C:

	Code tidy up and documentation update

2007-11-21 14:38  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.h, NCExtrapolation.h,
	  NCParameter.h:

	Move NCParameter out into its own file (it is used by both NCExtrapolation and NCContourFinder).

2007-11-21 14:36  rodriges

	* Contrib/pidtf/DataMCPlots/unbinnedKS/: ksSpecialCase.C,
	  ksSpecialCaseWrapper.C, ksWrapper.C, runKSTest.C:

	Some code to do unbinned KS tests

2007-11-21 14:23  bckhouse

	* NCUtils/Extrapolation/: NCContourFinder.cxx, NCContourFinder.h,
	  NCExtrapolation.cxx, NCExtrapolation.h:

	Move the majority of the contour finding code out into its own file (and namespace).

2007-11-21 12:37  nwest

	* GridTools/RemoteSoftwareDeployment/driver/set_local_config.pm:

	Check that work directory exists.

2007-11-21 12:37  nwest

	* GridTools/RemoteSoftwareDeployment/doc/rsd.html:

	Document the config/<experiment>.site_name as a way of setting a local
	host name

2007-11-21 12:37  nwest

	* GridTools/RemoteSoftwareDeployment/config/.cvsignore:

	Add *.site_name

2007-11-21 08:53  hartnell

	* NtupleUtils/NuXMLConfig.cxx:

	Changed from the deprecated iostream.h to:

	#include <iostream>

	then also needed:

	using std::cout;
	using std::cerr;
	using std::endl;

2007-11-21 06:32  Robert Hatcher <rhatcher@fnal.gov>

	*
	  Contrib/rhatcher/gminos_jobs/gminos_cfg_L250200_bhcurv_overlay.py:

	preliminary L250200_bhcurv_overlay, needs nDetPerSnarl, nRockPerSnarl
	updated (especially the last since we've changed from DOLOMITE to NDBEDROCK).

2007-11-21 05:55  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: Geo.cxx, Geo.h:


	Add enumerated type EBFieldType and EDetComponent:
	  enum EBFieldType {
	    // Bfield strength.  Assigned to medium and used to determine
	    // transport model used to swim particles through that medium in VMC.
	    kNoField,  // no bfield in medium
	    // kStronglyInhomogeneous should be used for fields with a strong
	    // gradient.  Tracking performed with Runge-Kutta method.
	    kStronglyInhomogeneous,
	    // kInhomogeneous should be used for fields with a small gradient.
	    // Tracking is performed along helix for each step, using the B-field
	    // calculated at the middle of the step (along a straight-line). It
	    // assumes the field is constant at that mid-point value for the step.
	    kInhomogeneous
	  };

	  enum EDetComponent {
	    // Detector components
	    kMars,         // rock
	    kLinr,         // cavern liner
	    kHall,         // cavern hall
	    kStpScint,     // strip scintillator
	    kStpTiO2,      // strip TiO2 coex coating
	    kMdlAlSkin,    // scint module Al skin
	    ...

	to help with association of medium definition, including bfield strength,
	with detector components.

2007-11-20 19:49  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Add and use a function AddSystematicParameter. Like AddParameter but it takes its min and max from the one-sigma values in NCType.

2007-11-20 19:46  nwest

	* GridTools/Ganga/GBS/python/GBSIOHelper.py:

	Replace any '\n' by ' ' before storing strings

2007-11-20 19:40  ahimmel

	* NtupleUtils/: LinkDef.h, NuXMLConfig.cxx, NuXMLConfig.h:



	Adding a new NuXMLConfig class.  It reads in a simple .xml file and stores a short and long name of the systematic to be studied and the amount of the shift (5% -> 1.05).  It inherits from TObject and so can be stored in root files.

2007-11-20 19:05  vahle

	* FDSpecWErrs/newfitcode/: FNFit.cxx, FNFit.h:

	Cleaning up compiler warnings

2007-11-20 19:01  vahle

	* FDSpecWErrs/: FDSpecWErrs.h, FDSpecWErrs.cxx:

	Cleaning up compiler warnings

2007-11-20 18:48  vahle

	* FDSpecWErrs/newfitcode/GNUmakefile:

	adding a missing makefile

2007-11-20 18:27  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Add (and use) a convenience function NCExtrapolation::AddParameter(shortName, latexName, min, max, prec (defaults to 1% max-min))

2007-11-20 18:16  hartnell

	* NtupleUtils/doc/runTheCode.html:


	Updated. Still a work in progress.

2007-11-20 18:15  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h,
	  NCExtrapolationJK_fit.cxx, NCExtrapolationMQ.cxx:

	Rename fExtraVars to fFitParams.

2007-11-20 18:11  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h,
	  NCExtrapolationJK_fit.cxx, NCExtrapolationMQ.cxx:

	Combine all the fExtraVars... variables into one NCParameter fExtraVars.

2007-11-20 17:56  bspeak

	* AtNuOutput/: NtpMaker.cxx, NtpMaker.h:

	Add tags WriteStrips and WriteScintHits to option the slimming of ntuples

2007-11-20 17:33  nwest

	* GridTools/RemoteSoftwareDeployment/libs_and_builds/:
	  build_config_table.dat, install_daikon_scripts.sh:

	Support daikon_04

2007-11-20 17:26  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h,
	  NCExtrapolationJK_fit.cxx, NCExtrapolationMQ.cxx:

	Obsolete the variables
	  vector<TString> fParNames; //names of parameters - shorthand
	  vector<TString> fAxisLabels; //latex for axis labels of parameters
	  vector<double> fStartValues; //start values of parameters to fit and plot
	  vector<double> fEndValues;   //end values of parameters to fit and plot

	in favour of using fExtraVars... for everything. ie we insert the oscillation parameters into the start of these vectors, renumbering the rest.

	This is the first step in moving towards using NCParameter for everything.

	Also stop special-casing the first 3 oscillation parameters. One effect of this is that the extrapolations now get passed a dmsq measured in units of 1e-3eV^2 not eV^2 as previously.

2007-11-20 16:47  nwest

	* GridTools/docs/glossary.html:

	Add RAL T2 UI

2007-11-20 16:39  nwest

	* GridTools/: Scripts/docs/Scripts.html,
	  Scripts/setup/setup_minos_lcg_grid.sh, docs/ChangeLog:

	Have the setup script set up GridTools even if unable to locate main
	s/w install, so long as MOG_TOOLS predefined.

2007-11-20 16:38  evans

	* NtupleUtils/macros/ReadMMOutput.C:

	An example macro of how to read the UK MM modular fitter output.

2007-11-20 16:37  evans

	* NtupleUtils/macros/RunModularMMFitter.C:

	An example macro of how to run the modular MM fitter.

2007-11-20 16:36  evans

	* NtupleUtils/: NuMatrixFitter.cxx, NuMatrixOutput.cxx,
	  NuMatrixOutput.h:

	Updating the NuMatrixOutput object to hold a no oscillation FD prediction.

2007-11-20 15:57  evans

	* NtupleUtils/NuMatrixFitter.cxx:

	Fixing the grid search as it was missing out the bins at the dm2 maximum.

2007-11-20 15:40  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat:

	Add Application:minossoft:R1.26-build_1

2007-11-20 15:17  scavan

	* Production/Cedar_phy/MRCC/srsafitter/:
	  reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_srsafitter_cedar_phy.C:

	found a problem in the MRCC path of these 3 far files - was using NearBeam confi
	g - it has been corrected to FarBeam

2007-11-20 14:44  Sue Kasahara <schubert@hep.umn.edu>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_minossoft.sh:


	Add umn site database environment

2007-11-20 13:20  scavan

	*
	  Production/Cedar_phy/MRCC/srsafitter/reco_far_spill_MRCC_srsafitter_cedar_phy.C:

	new script for far spill

	does mrcc, srsafitter, and blinding on all output files

2007-11-20 13:07  hartnell

	* NtupleUtils/doc/NuDST.html:


	Add a link to runTheCode.html

2007-11-20 13:06  hartnell

	* NtupleUtils/doc/runTheCode.html:


	A blow by blow account of how to run the various parts of the code.

	Work in progress...

2007-11-20 12:41  evans

	* NtupleUtils/: NuMatrixFitter.cxx, NuMatrixMethod.cxx:

	Debugging the modular MM fitter.

2007-11-20 12:22  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Fix off-by-0.5 error in the 1D projections.

2007-11-20 12:18  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Bugfix: continue making 2D projections after the first one.

2007-11-20 11:53  bckhouse

	* NCUtils/Extrapolation/NCExtrapolationJK_fit.cxx:

	Add a CVSID macro so that MSG calls compile.

2007-11-20 11:24  evans

	* NtupleUtils/: NuMatrixFitterMinuit.cxx, NuMatrixFitterMinuit.h:

	The Minuit version of the FD fit using the UK matrix method.

2007-11-20 11:11  hartnell

	* NuMuBar/macros/: dstAnaCC.C, dstAnaNMB.C:


	Macros to run the standard job to make plots with NuMuBar cuts/reco and
	with CC cuts/reco

2007-11-20 11:00  nwest

	* GridTools/docs/jobs_advice.html:

	Add sections of Job queue resources and loading

2007-11-20 00:31  kreymer

	* CVSROOT/check_access:

	added rmehdi to NTupleUtils and NuMuBar

2007-11-19 22:42  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCOscProb.cxx, NCOscProb.h,
	  NCType.h, Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationDP.cxx,
	  Extrapolation/NCExtrapolationJK.cxx,
	  Extrapolation/NCExtrapolationJK_fit.cxx,
	  Extrapolation/NCExtrapolationMQ.cxx,
	  Extrapolation/NCExtrapolationModule.cxx,
	  Extrapolation/NCExtrapolationModule.h,
	  Extrapolation/NCExtrapolationNS.cxx,
	  Extrapolation/NCExtrapolationRS.cxx,
	  macros/nearFarExtrapolation.C, macros/nearFarExtrapolationData.C,
	  macros/nearFarExtrapolationMC.C,
	  macros/nearFarExtrapolationSystExtMC.C:


	change the fitting from using w_e, w_s, w_mu to be |U_e3|^2, |U_s3|^2,
	and |U_mu4|^2 because w_e and w_s are functions of |U_mu3|^2.  previously
	we fit them as being independent, but in fact they are not.  the independent
	quantities are the elements of the mixing matrix.

	make the necessary changes throughout the package to conform to the new
	fitting parameters.

	these changes have been tested for all oscillation models and they work.

	also fixed bug in calculation of nu_mu -> nu_tau for case where Delta_43 = 0.

2007-11-19 22:15  Sue Kasahara <schubert@hep.umn.edu>

	* CandFitTrackCam/CandFitTrackCam.cxx:


	Initialize data member "fQP_rangebiased" to zero
	in default constructor.

2007-11-19 21:48  Sue Kasahara <schubert@hep.umn.edu>

	* GridTools/RemoteSoftwareDeployment/driver/get_site_info.pm:


	Add umn to site list

2007-11-19 21:20  bspeak

	* ControlRoomSoftware/evd/TRID_FAR_FILE.C:

	Run the trid event display on a file rather than the dispatcher

2007-11-19 19:46  hartnell

	* NtupleUtils/doc/cssSystematicsDSTs.html:


	Added FD MC

2007-11-19 17:35  nwest

	* GridTools/docs/: data_advice.html, index.html, jobs_advice.html:

	Create sections that hopefully will eventually have practical advice of
	job submission and data access.

2007-11-19 17:35  nwest

	* GridTools/docs/ChangeLog:

	DCM: Basic catalogue globalisation implemented.

2007-11-19 17:35  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Add Phil"s patch to import the right modules for the Ganga GUI.

2007-11-19 17:35  nwest

	* GridTools/Ganga/docs/ganga.html:

	Update Hints and Tips: Writing little scripts
	Update GUI - use $GANGA_BIN --no-rexec --gui

2007-11-19 17:35  nwest

	* GridTools/DataCacheManager/terminate.pm:

	Fix typo in error message.

2007-11-19 17:35  nwest

	* GridTools/DataCacheManager/: main.pm,
	  sei_get_remote_catalogues.pm, sei_init.pm:

	Basic catalogue globalisation implemented. The SE catalogues at RAL
	are published on the web.  DCM running on external UIs update their
	local copy if more than a few hours old.

2007-11-19 17:35  nwest

	* GridTools/: DataCacheManager/get_site_info.pm,
	  DataCacheManager/config/.cvsignore,
	  RemoteSoftwareDeployment/driver/get_site_info.pm:

	Extend local site configuration: allow site to store its name in the
	local file: minos.site_name.

2007-11-19 17:35  nwest

	* GridTools/DataCacheManager/docs/dcm.html:

	Describe how to install DCM, setting up local disk and SE access.

2007-11-19 17:35  nwest

	*
	  GridTools/DataCacheManager/config/minos.site_oxford_t2_ui.se_access:

	The Oxford UI can see the RAL catalogue services.

2007-11-19 17:35  nwest

	* GridTools/DataCacheManager/config/minos.se_servers:

	All SEs at RAL and the local NFS disk there now provide a catalogue
	service.

2007-11-19 16:27  evans

	* NtupleUtils/: NuMatrixFitter.cxx, NuMatrixFitter.h,
	  NuMatrixMethod.cxx, NuMatrixMethod.h:

	Writing a function to do a nubar CPT modular MM fit for systematics
	studies.

2007-11-19 16:26  evans

	* NtupleUtils/LinkDef.h:

	Adding new classes to the LinkDef file.

2007-11-19 16:25  evans

	* NtupleUtils/: NuMatrixOutput.cxx, NuMatrixOutput.h:

	A class to hold the output files from modular UK MM fitting.

2007-11-19 16:25  evans

	* NtupleUtils/: NuMatrixInput.cxx, NuMatrixInput.h:

	A class to hold the required input histograms for modular UK MM fitting.

2007-11-19 16:07  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Add a new type

	struct NCParameter
	{
	  std::string shortName;
	  std::string latexName;
	  double min;
	  double max;
	  double prec;
	};

	and use it internally in the contour finding code.

	Also reorders the header file quite a bit.

2007-11-19 16:02  scavan

	* Production/Cedar_phy/reco_MC_daikon_far_cedar_phy.C:

	updating gevpermip number to reflect usage on the farm

	all files in cvs should now have the proper gevpermip number as used in farm processing

2007-11-19 15:45  ahimmel

	* NuMuBar/NuPlots.cxx:



	Added new TrkEnd variables for studying the acceptance dip.

2007-11-19 14:22  scavan

	*
	  Production/Cedar_phy/MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_apshw_cedar_phy_bhcurv.C:

	script for Cedar_phy near spill MRCC srsafitter that can remove bad channels based on a text file

2007-11-19 12:15  bckhouse

	* NCUtils/Extrapolation/NCExtrapolationJK_fit.h:

	Clutching at straws: make sure to do the whole calculation in double precision.

2007-11-19 11:06  hartnell

	* NuMuBar/tools/timeLine.pm:


	Added the RunII info from minos-doc-3831.

2007-11-18 20:38  asousa

	* NCUtils/macros/nearFarExtrapolationSystExtMC.C:

	Fix to make macro work again.

2007-11-18 19:59  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoGeometry.cxx, GeoGeometry.h:


	Implement ls(Option_t* option) method:
	    // Public. list components of this geometry
	    // Argument: option string is a concatenated list of char options, where:
	    //           "m" => print list materials
	    //           "M" => print list of mediums
	    // Example: An option argument to specify listing of materials and mediums
	    //          is "mM"
	So far only supports print of materials and media associated with geometry.
	Can invoke through UgliGeomHandle, e.g.:
	loon[0] VldContext vldc(Detector::kFar,SimFlag::kData,VldTimeStamp());
	loon[1] UgliGeomHandle geo(vldc);
	loon[2] geo.ls("M");
	GeoGeometry {   Far|  Data|2007-11-18 19:56:36.778312000Z} a MINOS geometry
	Has 1 reference VldRange:|Far|Data|2006-06-30 17:27:30 2019-12-31 23:59:59
	Medium                        Material            isvol  ifield fieldm tmaxfd stemax deemax epsil  stmin
	ALUM                          ALUMINIUM           0      0      0      -1     -1     -1     1e-04  -1
	ALUM_B                        ALUMINIUM           0      1      6      -1     -1     -1     0.01   -1
	IRON                          IRON                0      0      0      -1     -1     -1     1e-04  -1
	IRON_B                        IRON                0      1      20     -1     -1     -1     0.01   -1
	AIR                           AIR                 0      0      0      -1     -1     -1     1e-04  -1
	AIR_B                         AIR                 0      1      6      -1     -1     -1     0.01   -1
	CONCRETE                      CONCRETE            0      0      0      -1     -1     -1     1e-04  -1
	ROCK                          ROCK                0      0      0      -1     -1     -1     1e-04  -1
	PSTYRENE SCINT                PSTYRENE SCINT      2      0      0      -1     -1     -1     1e-04  -1
	COEX TIO2 PSTYRENE            COEX TIO2 PSTYRENE  0      0      0      -1     -1     -1     1e-04  -1
	FARCOIL                       FARCOIL             0      0      0      -1     -1     -1     1e-04  -1
	FARCOIL_B                     FARCOIL             0      1      6      -1     -1     -1     0.01   -1
	DOLOMITE                      DOLOMITE            0      0      0      -1     -1     -1     1e-04  -1
	FEPL                          FEPL                0      0      0      -1     -1     -1     1e-04  -1
	FEPL_B                        FEPL                0      1      20     -1     -1     -1     0.01   -1
	WATER                         WATER               0      0      0      -1     -1     -1     1e-04  -1
	WATER_B                       WATER               0      1      6      -1     -1     -1     0.01   -1
	GREENSTONE                    GREENSTONE          0      0      0      -1     -1     -1     1e-04  -1
	NEARBEDROCK                   NEARBEDROCK         0      0      0      -1     -1     -1     1e-04  -1
	ALUM_SWIM                     ALUMINIUM           0      0      0      -1     -1     -1     0.01   -1
	ALUM_B_SWIM                   ALUMINIUM           0      1      6      -1     -1     -1     0.01   -1
	IRON_SWIM                     IRON                0      0      0      -1     -1     -1     0.01   -1
	IRON_B_SWIM                   IRON                0      1      20     -1     -1     -1     0.01   -1
	AIR_SWIM                      AIR                 0      0      0      -1     -1     -1     0.01   -1
	AIR_B_SWIM                    AIR                 0      1      6      -1     -1     -1     0.01   -1
	CONCRETE_SWIM                 CONCRETE            0      0      0      -1     -1     -1     0.01   -1
	ROCK_SWIM                     ROCK                0      0      0      -1     -1     -1     0.01   -1
	PSTYRENE SCINT_SWIM           PSTYRENE SCINT      2      0      0      -1     -1     -1     0.01   -1
	COEX TIO2 PSTYRENE_SWIM       COEX TIO2 PSTYRENE  0      0      0      -1     -1     -1     0.01   -1
	FARCOIL_SWIM                  FARCOIL             0      0      0      -1     -1     -1     0.01   -1
	FARCOIL_B_SWIM                FARCOIL             0      1      6      -1     -1     -1     0.01   -1
	DOLOMITE_SWIM                 DOLOMITE            0      0      0      -1     -1     -1     0.01   -1
	FEPL_SWIM                     FEPL                0      0      0      -1     -1     -1     0.01   -1
	FEPL_B_SWIM                   FEPL                0      1      20     -1     -1     -1     0.01   -1
	WATER_SWIM                    WATER               0      0      0      -1     -1     -1     0.01   -1
	WATER_B_SWIM                  WATER               0      1      6      -1     -1     -1     0.01   -1
	GREENSTONE_SWIM               GREENSTONE          0      0      0      -1     -1     -1     0.01   -1
	NEARBEDROCK_SWIM              NEARBEDROCK         0      0      0      -1     -1     -1     0.01   -1

2007-11-18 16:50  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/macro/PTSim_g3Config.C:


	Add description of use to top of script

2007-11-18 16:45  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Add another verbose message.
	This one prints out the values of all the oscillation parameters of the Minuit best fit for each point that is evaluated for the contour finding.
	Unfortunately at this point in the code I have no access to the names of the parameters, so the numbers are unlabeled.

2007-11-18 16:40  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/macro/PTSim_decayConfig.C:


	Add description of use to top of script

2007-11-18 03:08  tjyang

	* MuonRemoval/: NtpMREvent.cxx, NtpMREvent.h,
	  Module/NtpMRModule.cxx:

	add MRM information to NtpMREvent

2007-11-17 22:44  musser

	* RecoBase/CandShowerHandle.cxx:

	use ShowerEnergyConversionDogwood for shower energy corrections

2007-11-17 22:21  tjyang

	* MuonRemoval/MergeEvent.cxx:

	fixing another bug

2007-11-17 21:53  tjyang

	* NueAna/: MuonRemovalInfo.cxx, MuonRemovalInfo.h,
	  MuonRemovalInfoAna.cxx:

	add MRM information

2007-11-17 21:40  tjyang

	* MuonRemoval/MergeEvent.cxx:

	fix a bug

2007-11-17 19:59  tjyang

	* MuonRemoval/GenerateElec/: gen_reco_sntp.py,
	  makeReroot/gminos_elecfrommu_near.ffr:

	gen_reco_sntp.py
	   Use gminos_daikon_00 as the default gminos binary
	   Simplify the reroot command
	gminos_elecfrommu_near.ffr
	   WGAF 0: record everything
	   N3XSC FALSE: do not recalculate neugen xsec every time

2007-11-17 19:46  tjyang

	* MuonRemoval/MergeEvent.cxx:

	Save MRM information to the summary tree - mrminfo

2007-11-17 08:11  tjyang

	* MuonRemoval/: CandRmMu.cxx, CandRmMu.h, CandRmMuHandle.cxx,
	  CandRmMuHandle.h, MergeEvent.cxx, MergeEvent.h:

	add additional variables to save MRM information: pmu, Q2 and Eshw

2007-11-17 07:20  tjyang

	* MuonRemoval/GenerateElec/makeHepEvt/gen_uf_evt.F:

	update gen_uf_evt.F to generate stdhep file

2007-11-17 07:03  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/find_and_build_overlays.py:

	find_and_build_overlays.py: new overlay script finds the .tar.gz files
	in /minos/data/mcimport/STAGE/ rather than the old "fetch" script
	which had to rummage through the .index files to discover what .tar.gz
	files existed, retrieve the particular files from .tar of random .tar.gz
	files gathered together and put in PNFS/dCache.

2007-11-17 04:33  tjyang

	* MuonRemoval/GenerateElec/makeAscii/: LoadLibs.C, muonFromMRCC.C:

	add script to generate MRM muon ascii files in the format:
	pmux pmuy pmz pmu vtxx vtxy vtxz 0.0 pmux0 pmuy0 pmuz0 emu Q2 Eshw

2007-11-17 03:46  tjyang

	* MuonRemoval/MergeEvent.cxx:

	check if the MC electron/muon digit list is empty
	This might not be a problem for electrons. But sometimes the muon event has no hits since the MC muon momentum is independent of the original muon momentum and can be very small.

2007-11-16 22:01  boehm

	* MuonRemoval/: MergeEvent.cxx, NtpMREvent.cxx, NtpMREvent.h,
	  Module/NtpMRModule.cxx, Module/NtpMRModule.h:

	Adding in some modifications:

	Tracking the combined completeness in MR+Lepton events
	Tracking the best combined and best electron quantities

	Also setting up a cap to prevent Muons of greater than 500 GeV from doing anything to the system.

2007-11-16 20:53  rustem

	* GMinosInterface/: GMinosWrapper.cxx, GMinosWrapper.h:



	Tweak interface function to better match Fortran version.

2007-11-16 20:33  bckhouse

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationModule.cxx,
	  macros/nearFarExtrapolationMC.C:

	Fix binning of chisq surface plots.

	Add option Want2DProjections to control their creation (off by default).

2007-11-16 20:14  boehm

	* CVSROOT/check_access:

	Giving Greg and Tingjun access to MuonRemoval and all NueAna

2007-11-16 19:27  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Fix bug placing points in grid.

2007-11-16 19:24  rustem

	* GMinosInterface/: GMinosWrapper.cxx, GMinosWrapper.h,
	  macros/test.C:



	Add option to convert pdg codes to geant codes.

2007-11-16 19:03  arms

	* Contrib/rhatcher/gminos_jobs/gminos_cfg_L010185_nue_near.py:

	Fix an order-of-magnitude error in the POTs

2007-11-16 18:58  hartnell

	* NtupleUtils/doc/matrixMethod.html:


	A work in progress on how to run the "UK" Matrix Method... there are a
	lot of steps.

2007-11-16 18:42  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Create coarse (20x20) projections of the chisq surface for each plane a contour is drawn in. This behaviour is always on.

2007-11-16 18:36  hartnell

	* NuMuBar/: NuDSTAna.cxx, NuDSTAna.h:


	Clean up functions to make files for the matrix method:

	MMRereco()
	MMAna()

	and allow specification of output file.

2007-11-16 18:33  hartnell

	* NuMuBar/: NuBase.cxx, NuBase.h:


	Add a new wrapper for opening files. This one takes the whole output
	file name and RECREATEs it.

2007-11-16 18:31  hartnell

	* NtupleUtils/: NuMatrixFitter.cxx, NuMatrixFitter.h:


	Allow output file to be specified when writing histograms for the fitter

2007-11-16 17:52  Robert Hatcher <rhatcher@fnal.gov>

	* BField/BField.cxx:

	split long line in Print() output.

2007-11-16 17:33  nwest

	* GridTools/docs/jobs_tutorial.html:

	Clarify existence of .vomses file.
	Point of the voms-proxy-init -hours option.

2007-11-16 17:33  nwest

	* GridTools/docs/data_lfc_lcg.html:

	Add:    Account, Group and User Names
	Remove: Site Specific

2007-11-16 17:33  nwest

	* GridTools/docs/admin_procedures.html:

	Explain how to convert *.pem -> *.pk12

2007-11-16 17:28  nwest

	* GridTools/Ganga/docs/ganga.html:

	Hints and tips: .gangarc - how to change data directories

2007-11-16 16:52  pawloski

	* DataUtil/MasterGeVPerMip.cxx:

	Added a generic Cedar MC, CalB MC, and Cear_phy MC GeVPerMip number. Removed GeVPerMip numbers for data tags.

2007-11-16 16:46  pawloski

	* DataUtil/MasterGeVPerMip.cxx:

	Added a Generic Dogwood MC GeVPerMip Number

2007-11-16 16:42  ahimmel

	* NuMuBar/NuDSTAna.cxx:



	Minor bug fix.

2007-11-16 16:39  ahimmel

	* NuMuBar/NuDSTAna.cxx:



	Added two new sets of plots TrueTrkPass and TrueTrkFail to see if the acceptance bump is the same affect of tracking efficiency seen by Jim Musser in Doc 3356.

2007-11-16 15:39  bckhouse

	*
	  Production/Dogwood/headers/near_cosmic_mc/near_cosmic_mc_set_msg_levels.h:

	Supress more warnings.

2007-11-16 11:43  rjn

	* DataUtil/: EnergyCorrections.cxx, EnergyCorrections.h,
	  macros/testEnergyCorrection.C:

	Added ShowerEnergyConversionDogwood which is the function to be called by CandShowerHandle to apply ourbest knowledge of the conversion from MEU to GeV for the dogwood reconstruction, such that to first order the GeV number in the tree is correct (until we know more at least).

2007-11-16 11:41  nwest

	* setup/setup_minossoft_oxford.csh:

	As a precaution, define CVS_RSH. Pick up SAM for SL3 only.  Do define MOG_TOOLS if already defined.

2007-11-16 11:27  nwest

	* GridTools/Scripts/setup/: setup_minos_lcg_grid.sh,
	  setup_minos_oxford.csh:

	Remove patch: t2ui02 (SL3) where data disk is /datadisk not /data now that it has been renamed

2007-11-16 10:35  asousa

	* NCUtils/macros/nearFarExtrapolationSystExtMC.C:

	Missing TString declaration.

2007-11-16 06:23  Robert Hatcher <rhatcher@fnal.gov>

	* DcsUser/CoilTools.cxx:

	Was a problem for FarDet MC in a DB gap (ie. no acceptable entry, which to
	date there isn't) gave IsOK=true, but IsReverse=true.  What now happens
	when there is a DB gap is:
	                  IsOK   IsReverse
	  Near/Far Data   false  true      -- assume the worst
	  Near/Far MC     true   false     -- assume the best

2007-11-15 22:06  arms

	* Contrib/rhatcher/gminos_jobs/gminos_cfg_L010185_nue_near.py:

	Increase POTs/file for special set

2007-11-15 21:58  arms

	* Contrib/rhatcher/gminos_jobs/gminos_cfg_L010185_near_nue.py:

	Remove duplicate

2007-11-15 21:55  arms

	* Contrib/rhatcher/gminos_jobs/umn_list_wrkdirs.sh:

	Tweak to avoid a bad node

2007-11-15 21:16  rustem

	* PhysicsNtuple/: RunFinder.cxx, RunFinder.h, Store/FillHeader.cxx,
	  macros/draw.C:



	Change FillHeader so that it does not look for coil status and coil current for Monte-Carlo snarls.

2007-11-15 20:44  rustem

	* GMinosInterface/GMinosWrapper.cxx:



	Fix a first bug: forgot to add ";" at the end of a line.

2007-11-15 20:42  rustem

	* GMinosInterface/macros/test.C:



	Test macro.

2007-11-15 20:41  rustem

	* GMinosInterface/: GMinosWrapper.cxx, GMinosWrapper.h,
	  GNUmakefile, LinkDef.h:



	Initial commit of GMinosInterface code. So far it has 4 functions that are linked to Fotran code:

	   void nu_rewgt_(float*, float*, float*, float*, float*, int*);
	   void dump_neutrino_common_();
	   int geant2lund_(int *);
	   int lund2geant_(int *);

2007-11-15 19:22  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	New module GMinosInterface for linkage to GMINOS fortran routines --
	initially the flux "xy" nu_rewgt.F and the lund<->geant particle numbering.

2007-11-15 19:12  Robert Hatcher <rhatcher@fnal.gov>

	* GMinosInterface/.cvsignore:

	Add a .cvsignore so the GMinosInterface module isn't completely empty.

2007-11-15 18:38  bckhouse

	*
	  Production/Dogwood/MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	Don't prescale.

2007-11-15 18:35  bckhouse

	*
	  Production/Dogwood/MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	Supress both MRCC and srsafitter errors.

2007-11-15 18:22  bckhouse

	* Production/Dogwood/MRCC/reco_far_all_MRCC_cedar_phy.C:

	Supress RmMu errors, don't prescale.

2007-11-15 18:17  bckhouse

	* Production/Dogwood/MRCC/reco_near_cosmic_MRCC_cedar_phy.C:

	Use correct path name, don't prescale.

2007-11-15 18:11  bckhouse

	* Production/Dogwood/MRCC/reco_far_spill_MRCC_cedar_phy.C:

	Actually attach the MRCC path - oops.

2007-11-15 18:03  bckhouse

	* Production/Dogwood/: MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  headers/attach_mrcc_path.h:

	Don't prescale.

2007-11-15 17:57  bckhouse

	* Production/Dogwood/: MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  headers/mrcc/mrcc_set_msg_levels.h:

	Supress RmMu and AlgRmMu Errors.

2007-11-15 17:37  bckhouse

	* Production/Dogwood/: headers/far_all/far_all_set_msg_levels.h,
	  headers/far_all/far_all_set_msg_levels_srsafitter.h,
	  headers/near/near_set_msg_levels_srsafitter.h,
	  headers/near_cosmic_mc/near_cosmic_mc_set_msg_levels.h,
	  headers/srsafitter/srsafitter_set_msg_levels.h,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	More general solution to supressing FitTrackSA warning messages for srsafitter scripts.

2007-11-15 17:12  bckhouse

	* Production/Dogwood/:
	  headers/far_all/far_all_set_msg_levels_srsafitter.h,
	  headers/near/near_set_msg_levels_srsafitter.h,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C:

	Supress FitTrackSA warnings.

2007-11-15 17:00  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/: gminos_cfg_L010185_nue_near.py,
	  gminos_cfg_L010185_nue_overlay.py,
	  gminos_cfg_L010185_nue_rock.py:

	files necessary for overlay of nue enhanced neardet daikon 00 files.
	the gminos_cfg_L010185_nue_near.py duplicates gminos_cfg_L010185_near_nue.py
	... but this is what's necessary for the overlay code.  The file
	gminos_cfg_L010185_nue_rock is an exact duplicate gminos_cfg_L010185_rock.py
	but again the overlay code needs this naming.  Perhaps I can someday fix
	this...

2007-11-15 16:58  bckhouse

	* Production/Dogwood/:
	  headers/near/near_set_msg_levels_srsafitter.h,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Supress FitTrackSA warnings.

2007-11-15 16:53  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/gminos_ffr.py:

	Allow for case of overlay of enhanced flavor changed neardet fiducial
	events -- should be generated with SpecialName so that the resulting
	file is distinguishable from the standard overlay.

2007-11-15 16:43  bckhouse

	* Contrib/bckhouse/ProductionDogwoodClasses/macros/: add_to_path.C,
	  load_libs.C:

	macros copied from refactored scripts.

2007-11-15 16:33  bckhouse

	* Contrib/bckhouse/ProductionDogwoodClasses/: Makefile, README,
	  RecoFar.cxx, RecoFarAll.cxx, RecoFarAllSRSAFitter.cxx,
	  RecoJob.cxx, RecoJob.h, SRSAFitterMixin.cxx, reco_far_spill.C:

	Draft of a (possibly misguided) design of reco scripts as classes.

2007-11-15 15:54  boehm

	* NueAna/: ANtpShowerInfoAna.cxx, ANtpTrackInfoAna.cxx,
	  AnalysisInfoAna.cxx, NueAnalysisCuts.cxx,
	  NueAnaTools/SntpHelpers.cxx, NueAnaTools/SntpHelpers.h:

	Added GetPrimary Track function to the SntpHelpers which chooses the longest track based on Track end plane - track beg plane.

	Force ANtpShower, ANtpTrack, And Analysis Info to all adopt this standard for choosing the track

2007-11-15 15:37  evans

	* NtupleUtils/NuMatrixFitter.cxx:

	Making the grid searches a little more configurable. Making a chi2 surface.

2007-11-15 14:21  bckhouse

	* NCUtils/: NCOscProb.cxx, Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolationJK_fit.cxx,
	  Extrapolation/NCExtrapolationMQ.cxx,
	  macros/nearFarExtrapolationMC.C:

	Don't let number of expected events in chisq below some minimum value (1e-6).
	Add various Verbose messages when this kind of thing happens - for debugging the contours.

	Required a hack to define __CVSID__ in JK_fit so the MSG macro will work.

2007-11-15 14:21  scavan

	* NueAna/NueAnaTools/NueConvention.cxx:

	fixed NueConvention::NueEnergyCorrection(NueRecord *r ) to work with

	cedar_phy and cedar data

2007-11-15 14:01  evans

	* NtupleUtils/LinkDef.h:

	Correcting the name of a class in the LinkDef file.

2007-11-15 13:58  evans

	* NtupleUtils/: NuCrossSectionFitter.cxx, NuCrossSectionFitter.h:

	Removing three unused parameters.

2007-11-15 13:54  evans

	* NtupleUtils/LinkDef.h:

	Adding new classes to the LinkDef file.

2007-11-15 13:46  evans

	* NtupleUtils/: NuXFitAnalysis.cxx, NuXFitAnalysis.h:

	The class to apply my ND XSec weights to the far detector data and do
	an FD CPT fit (using Minuit2).

2007-11-15 13:45  evans

	* NtupleUtils/: NuCrossSectionFitter.cxx, NuCrossSectionFitter.h:

	The class to do the NDFit part of my cross-section fitting extrapolation.

2007-11-15 13:44  evans

	* NtupleUtils/: NuTreeWrapper.cxx, NuTreeWrapper.h:

	NuTreeWrapper is a wrapper to a the tree of NuEvents found in the DSTs
	to give the right interface to my cross-section fitting extrapolation.

2007-11-15 03:53  arms

	* Contrib/rhatcher/gminos_jobs/umn_copy_flux.sh:

	Fix a minor bug in excluding host machines

2007-11-15 01:42  asousa

	* NCUtils/macros/nearFarExtrapolationSystExtMC.C:

	Make systematic study macro compatible with latest modifications to osc models in the code.

2007-11-15 01:06  George Irwin <gmieg@slac.stanford.edu>

	* NueAna/Trimmer.cxx:

	Move "bool ret" declarations above case statements for GCC 3.2.3 and 3.3.4.

2007-11-14 21:14  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolationModule.cxx,
	  macros/nearFarExtrapolationMC.C:

	protect against survival probability going slightly negative for certain
	values of parameters in the 3 flavor case.

	make it possible to pass value of delta for 3 flavor case into the macro,
	and grab that from the extrapolation objects.

2007-11-14 20:45  arms

	* Contrib/rhatcher/gminos_jobs/run_umn.sh:

	Add command-line option to turn off reroot of MC output for UMN

2007-11-14 20:09  arms

	* Contrib/rhatcher/gminos_jobs/gminos_cfg_L010185_near_bhcurv.py:

	Updated test settings (commented out)

2007-11-14 18:15  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h, NCOscProb.cxx,
	  NCOscProb.h, NCType.h, Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolationModule.cxx,
	  macros/concatenate_contours.C, macros/nearFarExtrapolation.C,
	  macros/nearFarExtrapolationData.C,
	  macros/nearFarExtrapolationMC.C:


	refine the oscillation probability calculations.  make specific cases for
	models with Delta_{43} = 0 and Delta_{41} = 0.  the latter is the same as
	w_{mu} = 0.

	make necessary changes to be able to use these from the code.

2007-11-14 17:37  hartnell

	* NtupleUtils/NuHistos.cxx:


	The titles for the "PQ" and "All" histos claimed to be NuMu when they
	are NuMuBar and All respectively.

2007-11-14 17:31  hartnell

	* NtupleUtils/NuInputEvents.cxx:


	If there is no TTree in the first file then return and don't try to make
	a chain.

	Previously it assumed that there would always be a TTree present.

2007-11-14 17:29  bckhouse

	* Production/Dogwood/headers/far_all_mc/THIS_DIRECTORY_IS_OBSOLETE:

	CVS can't delete directories...

2007-11-14 17:29  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  headers/far_all_mc/far_all_mc_configure.h,
	  headers/far_all_mc/far_all_mc_create_path.h,
	  headers/far_all_mc/far_all_mc_set_msg_levels.h,
	  headers/far_cosmic_mc/far_cosmic_mc_configure.h,
	  headers/far_cosmic_mc/far_cosmic_mc_create_path.h,
	  headers/far_cosmic_mc/far_cosmic_mc_set_msg_levels.h,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C:

	Rename far_all_mc to far_cosmic_mc.

2007-11-14 16:52  nwest

	* GridTools/docs/ChangeLog:

	  GBS is now a working system

2007-11-14 16:52  nwest

	* GridTools/Ganga/GBS/python/GBSTask.py:

	Add method:-
	  GetJobs(job_name_pattern = ".*")

2007-11-14 16:52  nwest

	* GridTools/Ganga/GBS/python/GBSModelRegistry.py:

	Add method:-
	  GetRegistry()

2007-11-14 16:52  nwest

	* GridTools/Ganga/GBS/python/GBSModel.py:

	Add methods:-
	  GetDescription()
	  GetTitle()

2007-11-14 16:52  nwest

	* GridTools/Ganga/GBS/python/GBSManager.py:

	Update method:-
	  AddTask(task_name,model_name="default") - Check model is valid.

2007-11-14 16:52  nwest

	* GridTools/Ganga/GBS/minos/MinosDCMTask.py:

	Update method:-
	  AddProtoJob() - List existing jobs that are not part of the query.

2007-11-14 16:52  nwest

	* GridTools/Ganga/GBS/docs/gbs_user.html:

	Document the first MINOS Extension: DCMQuery.

2007-11-14 16:52  nwest

	* GridTools/: DataCacheManager/init.pm,
	  DataCacheManager/docs/dcm.html, Ganga/GBS/docs/gbs_design.html,
	  Ganga/GBS/docs/gbs_index.html,
	  Ganga/GBS/docs/gbs_programmer.html,
	  Ganga/GBS/python/bootstrap.py,
	  RemoteSoftwareDeployment/doc/rsd.html,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  Scripts/maintenance/version_number:

	Move version number onto V01-00-00

2007-11-14 16:29  bckhouse

	* Production/Dogwood/MRCC/srsafitter/:
	  reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	Port bugfixes to MRCC/srsafitter scripts.

2007-11-14 15:36  bckhouse

	* Production/Dogwood/MRCC/: reco_MC_daikon_far_MRCC_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_cedar_phy.C,
	  reco_far_all_MRCC_cedar_phy.C, reco_far_spill_MRCC_cedar_phy.C,
	  reco_near_cosmic_MRCC_cedar_phy.C,
	  reco_near_spill_MRCC_cedar_phy.C:

	Port bugfixes to MRCC scripts.

2007-11-14 15:11  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/setup_fnal_bundle.csh:

	sometimes setup_labyrinth.csh appears to get passed the args from the
	setup_fnal_bundle.csh invocation, which it doesn't understand.  Use "shift"
	to make it go away.

2007-11-14 15:07  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/: setup_subbundle.csh,
	  setup_subbundle.sh:

	Make neugen3 v3_5_5 the version for daikon_04 (and beyond).

2007-11-14 15:04  rustem

	* PhysicsNtuple/: Default.cxx, RunAlgSnarl.cxx, RunAlgSnarl.h,
	  macros/study.C:



	Add an example macro study.C, that uses PhysicsNtuple as input. Add a new
	function AddSet() to RunAlgSnarl that add ntuple files from afs based on
	configuration and beam type.

2007-11-14 14:55  asousa

	* NCUtils/: NCAnalysisUtils.cxx, NCType.h,
	  macros/nearFarExtrapolationSystExtMC.C:

	Adding Tobi's parametrization of the Near Detector Cleaning systematics to NCUtils.

2007-11-14 14:44  bckhouse

	* Production/Dogwood/: reco_far_spill_cedar_phy.C,
	  headers/io/attach_output_srsafitter.h,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_spill_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Port bugfixes to srsafitter scripts.

2007-11-14 14:23  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_pythia6.sh:

	Replace hardwired use of curl, by fetchit variable that allows either wget or curl (but not both) to be missing

2007-11-14 14:13  bckhouse

	* Production/Dogwood/headers/near_mc/near_mc_set_msg_levels.h:

	Bring message levels in line with Cedar_phy scripts.

2007-11-14 14:08  bspeak

	* RunSummary/: FilterRunType.cxx, FilterRunType.h:

	Add hook to catch FakeSpill types

2007-11-14 13:48  evans

	* NtupleUtils/macros/CombineMMHelpers.C:

	Updates to the macro to combine all matrix method histograms.

2007-11-14 13:44  evans

	* NtupleUtils/macros/MakeMMFluxHelpersConfig.C:

	Macro that calls the code to make beam matrices.

2007-11-14 13:26  evans

	* NuMuBar/macros/MMAna.C:

	Macro to run DoIO for MM histograms. Does a lot of the necessary
	normalisations.

2007-11-14 12:41  nwest

	* GridTools/Scripts/setup/setup_minos_oxford.csh:

	Only clean PYTHONPATH and LD_LIBRARY_PATH if they exist. Support t2ui02 (SL3) where data disk is /datadisk not /data

2007-11-14 12:40  nwest

	* GridTools/Scripts/setup/setup_minos_oxford.sh:

	Only clean PYTHONPATH and LD_LIBRARY_PATH if they exist

2007-11-14 12:25  hartnell

	* CandDigit/DBtxt_AlgFilterDigitList_NearDet.C:


	Changed the default AlgFilterDigitList setting to use the new
	CANDDIGITBADCHANNELS database table. Bad channels listed in this
	database table will now automatically be removed.

	If your database doesn't have the table then any ND job using
	CandDigit will crash. A temporary work around is to add these lines to
	your macro:

	    AlgFactory &af = AlgFactory::GetInstance();
	    AlgHandle alh = af.GetAlgHandle("AlgFilterDigitList","NearDet");
	    AlgConfig &alg = alh.GetAlgConfig();
	    alg.UnLockValues();
	    alg.UnLockKeys();
	    alg.Set("FilterStrategy",1);
	    alg.LockValues();
	    alg.LockKeys();
	    alg.Print();

2007-11-14 11:44  hartnell

	* NuMuBar/: NuDSTAna.cxx, NuDSTAna.h:


	Minor mods

2007-11-14 10:13  hartnell

	* NuMuBar/tools/timeLine.pm:


	Added times for when the beam actually changed configuration (as opposed
	to when runs stopped and started independently at the two detectors).

	Thanks to Mary Bishai for pointing out her table in minos-doc-1491,
	page 95.

2007-11-14 04:36  asousa

	* NCUtils/: NCType.h, Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationModule.cxx,
	  Extrapolation/NCExtrapolationModule.h,
	  macros/nearFarExtrapolationSystExtMC.C:

	Adding option to configure path for systematics study output file. Fixes to get the best fit parameters properly written to the output file. Setting 1-sigma shift for CC background syst. to 15%.

2007-11-13 23:20  rustem

	* PhysicsNtuple/: Factory.h, Hist1d.h, LinkDef.h, TrueNu.cxx,
	  TrueNu.h, Store/FillHeader.cxx:



	A development snapshot:

	1) Add Remove function to the factory,
	2) Add true/reco comparison operator to TrueNu.h,
	3) Fix some minor bugs in Hist1d template,
	4) Per Robert's request remove direct access to database for dcs info and use
	CoilTools instanton class instead.

2007-11-13 23:18  arms

	* Contrib/rhatcher/gminos_jobs/gminos_cfg_L010185_near_nue.py:

	Preliminary cfg for offsite production of ND nue CC (oscillated) events to be overlayed in "enhanced" samples

2007-11-13 22:47  nwest

	* GridTools/Ganga/GBS/python/register_models.py:

	If the config option UserModelsPath is set load experiment specific
	extension.

2007-11-13 22:47  nwest

	* GridTools/Ganga/GBS/minos/: .cvsignore, MinosDCMTask.py,
	  __init__.py, register_user_models.py:

	Add first MINOS specific model.  It is the same as the default except
	that its Task holds a DCM query (which could be a SAM query) and from
	which it can generate a set of jobs each having a DCM URL as its
	application script input arg.  If the DCM query grows with time the
	Task can be instructed to add additional jobs for the new data.

2007-11-13 22:47  nwest

	* GridTools/Ganga/GBS/: docs/gbs_user.html, python/.gbsrc:

	Add the config option UserModelsPath

2007-11-13 22:47  nwest

	* GridTools/Ganga/GBS/docs/gbs_programmer.html:

	Set out the rules whereby an experiment can extend the set of models.

2007-11-13 22:04  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_far_all_cedar_phy.C,
	  headers/far/far_set_calibrator.h,
	  headers/far/far_set_msg_levels.h,
	  headers/far_all/far_all_set_msg_levels.h,
	  headers/far_all_mc/far_all_mc_set_msg_levels.h,
	  headers/far_mc/far_mc_set_calibrator.h,
	  headers/far_mc/far_mc_set_msg_levels.h,
	  headers/io/set_cand_output_bntp.h, headers/near/near_configure.h,
	  headers/near/near_configure_filter.h,
	  headers/near/near_configure_shower.h,
	  headers/near/near_create_path.h, headers/near/near_do_report.h,
	  headers/near/near_set_calibrator.h,
	  headers/near/near_set_msg_levels.h,
	  headers/near_cosmic/near_cosmic_set_msg_levels.h,
	  headers/near_cosmic_mc/near_cosmic_mc_configure.h,
	  headers/near_cosmic_mc/near_cosmic_mc_configure_shower.h,
	  headers/near_cosmic_mc/near_cosmic_mc_create_path.h,
	  headers/near_cosmic_mc/near_cosmic_mc_set_msg_levels.h,
	  headers/near_mc/near_mc_set_calibrator.h,
	  headers/near_mc/near_mc_set_msg_levels.h:

	Fixes for multiple stupid renaming mistakes.

2007-11-13 21:57  scavan

	* NueAna/NueAnaTools/: NueConvention.cxx, NueConvention.h:

	added nueana calibrations for

	cedar carrot
	cedar daikon
	cedar_phy daikon  (different calibrations here for near and far)

	to update a NueRecord do

	NueConvention::NueEnergyCalibration(NueRecord *nr)

	to just update a meu value do

	float NueConvention::NueEnergyCalibration(float meu, int releasttype, int detector=2){return gev;}

2007-11-13 21:40  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_far_all_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, reco_near_cosmic_cedar_phy.C,
	  reco_near_spill_cedar_phy.C:

	Fix include paths.

2007-11-13 20:38  boehm

	* VertexFinder/NtpVtxFinder/NtpVtxFinder.cxx:

	Changing the function which finds the primary track in the event to choose the primary track as track.plane.end - track.plane.beg instead of plane.n.

	This seems to be a more reasonable approach for the near detector

2007-11-13 18:09  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Improve error message when unable to find application

2007-11-13 18:07  nwest

	* GridTools/Ganga/GBS/python/GBSTask.py:

	Update methods
	  SetMaxSubmitJobs   Add (n=0)
	  PromoteProtoJobs   Provide default for job_name_pattern = ".*"
	  RemoveProtoJobs    Provide default for job_name_pattern = ".*"

2007-11-13 18:07  nwest

	* GridTools/Ganga/GBS/docs/gbs_user.html:

	Complete documentation of the existing system  Must be time to write more code!

2007-11-13 18:07  nwest

	* GridTools/Ganga/GBS/docs/: gbs_design.html, gbs_programmer.html:

	Cosmetic reorganisation of the top of the document.

2007-11-13 16:52  hartnell

	* NuMuBar/tools/timeLine.pm:


	Updated with horn off runs from Trish.

2007-11-13 14:47  hartnell

	* NtupleUtils/doc/cssSystematicsDSTs.html:


	New datasets

2007-11-13 10:26  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_far_all_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, reco_near_cosmic_cedar_phy.C,
	  reco_near_spill_cedar_phy.C,
	  MRCC/reco_MC_daikon_far_MRCC_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/reco_far_all_MRCC_cedar_phy.C,
	  MRCC/reco_far_spill_MRCC_cedar_phy.C,
	  MRCC/reco_near_cosmic_MRCC_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/set_calibrator_far.h, headers/set_calibrator_far_mc.h,
	  headers/set_calibrator_near.h, headers/set_calibrator_near_mc.h,
	  headers/far/far_set_calibrator.h,
	  headers/far_mc/far_mc_set_calibrator.h,
	  headers/near/near_set_calibrator.h,
	  headers/near_mc/near_mc_set_calibrator.h,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_spill_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Move set_calibrator headers inside the script specific directories.

2007-11-13 07:16  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_daikon_scripts.sh:

	Deliberately break support for daikon_04 to ensure script checked when daikon_04 re-released

2007-11-12 18:04  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Update for Oxford UI.  If Ganga present, also set up GBS.

2007-11-12 18:04  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_far_all_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, reco_near_cosmic_cedar_phy.C,
	  reco_near_spill_cedar_phy.C,
	  MRCC/reco_MC_daikon_far_MRCC_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/reco_far_all_MRCC_cedar_phy.C,
	  MRCC/reco_far_spill_MRCC_cedar_phy.C,
	  MRCC/reco_near_cosmic_MRCC_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/set_msg_levels_far.h, headers/set_msg_levels_far_all.h,
	  headers/set_msg_levels_far_all_mc.h,
	  headers/set_msg_levels_far_mc.h, headers/set_msg_levels_near.h,
	  headers/set_msg_levels_near_cosmic.h,
	  headers/set_msg_levels_near_cosmic_mc.h,
	  headers/set_msg_levels_near_mc.h,
	  headers/far/far_set_msg_levels.h,
	  headers/far_all/far_all_set_msg_levels.h,
	  headers/far_all_mc/far_all_mc_set_msg_levels.h,
	  headers/far_mc/far_mc_set_msg_levels.h,
	  headers/near/near_set_msg_levels.h,
	  headers/near_cosmic/near_cosmic_set_msg_levels.h,
	  headers/near_cosmic_mc/near_cosmic_mc_set_msg_levels.h,
	  headers/near_mc/near_mc_set_msg_levels.h,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_spill_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Move script specific set_msg_level headers into the relevant directories.

2007-11-12 18:03  nwest

	* GridTools/: Scripts/docs/Scripts.html, docs/glossary.html,
	  docs/jobs_tutorial.html:

	Update for Oxford UI.

2007-11-12 18:03  nwest

	* GridTools/Ganga/GBS/python/GBSJob.py:

	Cosmetic change to output.  Include status "completing".

2007-11-12 17:47  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	write out tgraph of 1d chi^2 plots.  change best fit spectrum legend to
	have mc as line rather than fill.

2007-11-12 17:41  bckhouse

	* Production/Dogwood/: reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  headers/near_mc/near_mc_configure.h,
	  headers/near_mc/near_mc_create_path.h,
	  headers/near_mc/near_mc_do_report.h,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	near_mc/ - previously mc_reco/

2007-11-12 17:35  bckhouse

	* Production/Dogwood/: reco_MC_daikon_near_cosmic_cedar_phy.C,
	  headers/near_cosmic_mc/near_cosmic_mc_configure.h,
	  headers/near_cosmic_mc/near_cosmic_mc_configure_shower.h,
	  headers/near_cosmic_mc/near_cosmic_mc_create_path.h:

	near_cosmic_mc/ - previously mc_reco_cosmic/

2007-11-12 17:30  bckhouse

	* Production/Dogwood/: reco_near_cosmic_cedar_phy.C,
	  MRCC/reco_near_cosmic_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  headers/near_cosmic/near_cosmic_configure.h,
	  headers/near_cosmic/near_cosmic_create_path.h,
	  headers/near_cosmic/near_cosmic_do_report.h,
	  headers/near_cosmic/near_cosmic_set_filter.h,
	  headers/near_cosmic/near_cosmic_set_prescaling.h,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C:

	near_cosmic/ - previously cosmic/

2007-11-12 17:23  bckhouse

	* Production/Dogwood/: reco_MC_daikon_near_cedar_phy.C,
	  reco_near_spill_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/near/near_configure.h,
	  headers/near/near_configure_filter.h,
	  headers/near/near_configure_shower.h,
	  headers/near/near_create_path.h, headers/near/near_do_report.h,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	near/ - previously spill/

2007-11-12 17:11  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  MRCC/reco_MC_daikon_far_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  headers/far_mc/far_mc_configure.h,
	  headers/far_mc/far_mc_create_path.h,
	  headers/far_mc/far_mc_do_report.h,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C:

	far_mc/ previously mc_reco_far/

2007-11-12 17:05  bckhouse

	* Production/Dogwood/headers/far_all_mc/: far_all_mc_configure.h,
	  far_all_mc_create_path.h:

	far_all_mc/ - name unchanged.

2007-11-12 17:03  bckhouse

	* Production/Dogwood/headers/far_all/: far_all_configure.h,
	  far_all_configure_filters.h, far_all_create_path.h:

	far_all - name unchanged.

2007-11-12 17:02  bckhouse

	* Production/Dogwood/: reco_far_spill_cedar_phy.C,
	  MRCC/reco_far_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/far/far_configure.h, headers/far/far_configure_filters.h,
	  headers/far/far_create_path.h, headers/far/far_do_report.h,
	  srsafitter/reco_far_spill_cedar_phy_srsafitter.C:

	Previously far_spill.

2007-11-12 16:55  bckhouse

	* Production/Dogwood/headers/: io/attach_blinded_output.h,
	  io/attach_output.h, io/attach_output_mc.h,
	  io/attach_output_mc_srsafitter.h, io/attach_output_srsafitter.h,
	  io/set_cand_output_bntp.h, io/set_input_data.h,
	  io/set_input_mc.h, io/set_ntpst_output_bntp.h,
	  io/set_ntpst_output_bntpsa.h, reroot/reroot_configure.h,
	  reroot/reroot_create_path.h, reroot/reroot_do_report.h,
	  util/get_record_title.h, util/get_run_number.h, util/run.h:

	First commit - headers not subject to renaming.

2007-11-12 16:42  bckhouse

	* Production/Dogwood/: MRCC/reco_MC_daikon_far_MRCC_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/reco_far_all_MRCC_cedar_phy.C,
	  MRCC/reco_far_spill_MRCC_cedar_phy.C,
	  MRCC/reco_near_cosmic_MRCC_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/aclic.h, headers/apply_spectrometer_fudge.h,
	  headers/attach_mrcc_path.h, headers/configure_ugli.h,
	  headers/set_calibrator_far.h, headers/set_calibrator_far_mc.h,
	  headers/set_calibrator_near.h, headers/set_calibrator_near_mc.h,
	  headers/set_msg_levels_far.h, headers/set_msg_levels_far_all.h,
	  headers/set_msg_levels_far_all_mc.h,
	  headers/set_msg_levels_far_mc.h, headers/set_msg_levels_near.h,
	  headers/set_msg_levels_near_cosmic.h,
	  headers/set_msg_levels_near_cosmic_mc.h,
	  headers/set_msg_levels_near_mc.h, headers/set_sm2_bfield.h,
	  headers/use_new_hv_table.h, macros/add_to_path.C,
	  macros/load_libs.C,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_spill_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	First commit of the remainder of the Dogwood scripts and the toplevel contents of headers/ copied from Cedar_phy/restructure-chris

2007-11-12 16:35  bckhouse

	* Production/Dogwood/: reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_far_all_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, reco_near_cosmic_cedar_phy.C,
	  reco_near_spill_cedar_phy.C:

	First commit of Dogwood scripts (copied from Cedar_phy/restructure-chris).

	I plan to take advantage of this move to make changes to the naming scheme which affect directory names.

2007-11-12 15:49  boehm

	* NueAna/: Trimmer.cxx, Trimmer.h:

	Snazzy new interface for setting the Trimmer cuts to make use of the NueStandard trimming options

2007-11-12 15:23  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/:
	  set_msg_levels_near.h, set_msg_levels_near_cosmic.h,
	  set_msg_levels_near_cosmic_mc.h, set_msg_levels_near_mc.h:

	Change these function names too.

2007-11-12 15:22  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/:
	  set_calibrator_far_mc.h, set_calibrator_near.h,
	  set_calibrator_near_mc.h:

	Forgot to change the function names when the files were moved.

2007-11-12 15:20  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/:
	  io/attach_blinded_output.h, io/attach_output.h,
	  io/attach_output_mc.h, io/attach_output_mc_srsafitter.h,
	  io/attach_output_srsafitter.h, io/set_cand_output_bntp.h,
	  io/set_ntpst_output_bntp.h, io/set_ntpst_output_bntpsa.h,
	  util/set_cand_output_bntp.h, util/set_ntpst_output_bntp.h,
	  util/set_ntpst_output_bntpsa.h:

	Move IO related files to io/ directory where they belong.

2007-11-12 14:57  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  headers/set_calibrator_simple.h,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Remove obsolete file.

2007-11-12 14:42  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_near_cosmic_cedar_phy.C, reco_near_spill_cedar_phy.C,
	  MRCC/reco_near_cosmic_MRCC_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/set_calibrator.h, headers/set_calibrator_near.h,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Naming convention.

2007-11-12 14:36  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  MRCC/reco_MC_daikon_far_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  headers/set_calibrator_daikon_far.h,
	  headers/set_calibrator_far_mc.h,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C:

	Naming scheme.

2007-11-12 14:29  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  headers/set_calibrator_daikon.h,
	  headers/set_calibrator_near_mc.h,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C:

	Naming convention.

2007-11-12 14:19  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  headers/set_msg_levels_mc_cosmic.h,
	  headers/set_msg_levels_near_cosmic_mc.h,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Naming scheme.

2007-11-12 14:11  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/set_msg_levels_cosmic.h:

	Remove old header.

2007-11-12 14:11  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_near_cosmic_cedar_phy.C,
	  MRCC/reco_near_cosmic_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  headers/set_msg_levels_near_cosmic.h,
	  srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C:

	Naming scheme.

2007-11-12 14:04  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  headers/set_msg_levels.h, headers/set_msg_levels_mc.h,
	  headers/set_msg_levels_near_mc.h,
	  headers/mc_reco/mc_reco_create_path.h,
	  headers/spill/spill_configure_shower.h,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Tidy up naming scheme plus some changes that got missed.

2007-11-12 11:58  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_near_spill_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_near_spill_MRCC_srsafitter_cedar_phy.C,
	  headers/set_msg_levels_near.h,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Tidy up naming convention.

2007-11-12 11:47  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/srsafitter/:
	  reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	Port bugfixes to MRCC srsafitter scripts.

2007-11-12 11:23  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat:

	Add S07-11-10-R1-26

2007-11-12 11:16  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/:
	  reco_MC_daikon_near_MRCC_cedar_phy.C,
	  reco_far_all_MRCC_cedar_phy.C, reco_far_spill_MRCC_cedar_phy.C:

	Port bugfixes to MRCC scripts.

2007-11-12 11:08  bckhouse

	* Production/Cedar_phy/restructure-chris/srsafitter/:
	  reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  reco_far_all_cedar_phy_srsafitter.C,
	  reco_near_cosmic_cedar_phy_srsafitter.C:

	Port bugfixes to srsafitter scripts.

2007-11-12 10:46  nwest

	* WebDocs/SnapshotRel.html:

	Add S07-11-10-R1-26

2007-11-12 10:41  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C:

	Fix swapping of nRun and nSkip.

2007-11-12 06:22  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/vld/FarBeamDetOnly_D00/:
	  reco_MC_daikon_far_dogwood.C, reco_MC_eggplant_far_dogwood.C:


	Add dogwood versions of the daikon & eggplant reconstruction scripts.
	The settings are based on those of a script circulated by J. Musser
	on 11/7/2007.

2007-11-12 04:03  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/vld/FarBeamDetOnly_D00/:
	  PTSim_decayConfig.C, PTSim_g3Config.C, ptsim_G3_eggplant.C,
	  reco_MC_daikon_far_cedar_phy.C, reco_MC_eggplant_far_cedar_phy.C:


	Add new validation directory to store far det beam detector vtx only
	scripts for processing Daikon_00 produced reroot files.

2007-11-12 03:56  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/vld/CosmicLE/: PTSim_decayConfig.C,
	  PTSim_g3Config.C, reco_MC_eggplant_far_cosmic_cedar_phy.C:


	Add missing libraries to reco_MC_eggplant_far_cosmic_cedar_phy.C LoadLibs()
	Add configuration scripts used in Daikon_02 CosmicLE processing. These
	are identical to the default configuration scripts provided in
	ParticleTransportSim/macro, but are included here for completeness.

2007-11-12 00:17  Sue Kasahara <schubert@hep.umn.edu>

	* SRT_MINOS/special/pre_standard.mk:


	Add:
	-lMCNtuple -lTruthHelperNtuple -lCandNtupleSR -lStandardNtuple
	to the definition of MINOSLIBS so that these ntuple libraries
	become part of the standard minossoft library list built into loon.
	It's therefore no longer required to Load these libraries at the start of a
	loon job when reading an ntuple file.

2007-11-12 00:03  asousa

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  macros/nearFarExtrapolationSystExtMC.C:

	Updates needed for NC systematics studies using new oscillation models and new fitting routine. Adding new macro to be used in running the study at RAL.

2007-11-11 23:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTask.py:

	Remove duplicated comment.

2007-11-11 23:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobAnalyser.py:

	Include Ganga status "killed".

2007-11-11 23:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJob.py:

	Give up using os.tmpnam() to avoid warnings about security.

2007-11-11 23:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_user.html:

	Start to write a tutorial on how to use GBS.  About half written so far.

2007-11-11 23:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/: gbs_index.html, gbs_programmer.html:

	Reorganise the published URL so that it can include the documentation
	as well as the code.

2007-11-11 23:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_design.html:

	Warn that RETRY commands need to return non-empty data.

2007-11-11 21:09  hartnell

	* NuMuBar/tools/: sam.pl, timeLine.pm:


	Implemented a function to get files from SAM with run_number
	constraints.

	Added functions to run cedar_phy_bhcurv jobs and PTSim jobs.

2007-11-11 21:07  hartnell

	* NuMuBar/macros/ptsim/ptsim_G3_eggplant.C:


	A macro from Sue to run PTSim. I have modified it to use SAM to get
	the input reroot files.

2007-11-11 20:44  Sue Kasahara <schubert@hep.umn.edu>

	* RawData/RawRecord.cxx:


	Add job history print to RawRecord::Print method

2007-11-11 20:43  Sue Kasahara <schubert@hep.umn.edu>

	* CandData/CandRecord.cxx:


	Add job history print to CandRecord::Print method.

2007-11-11 20:43  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecJobHistory.cxx, RecJobRecord.cxx, RecJobRecord.h,
	  RecMinos.cxx, RecRecordImp.cxx:


	Adjust print methods.  Add job history print to RecMinos::Print and
	RecRecordImp::Print.

2007-11-11 19:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTimeStamp.py:

	A standard time stamp for GLF.

2007-11-11 19:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSManager.py:

	Update methods:-

	  AddTask(task_name,model="default")  Check for legal task_name.

2007-11-11 19:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobAnalyser.py:

	Update methods:-
	  __repr__()    Tidy up
	  Apply()       Write own analysis to GLF.

2007-11-11 19:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJob.py:

	Update methods:-
	  AsString(level = "Full") List output of current try directory and its GLF.
	  CanSubmit()              Fail if no application script.
	  Submit()                 Use GBSTimeStamp.  Trap fails to Ganga.GPI.jobs
	  _GetTryOutputDir         Add arg try_req = 0
	  _GetGbsLogFileName       Add arg try_req = 0

2007-11-11 19:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSIdCodes.py:

	Add GID_JSC_UNKNOWN

2007-11-11 14:02  hartnell

	* NuMuBar/tools/: sam.pl, timeLine.pm:


	Pulled out all the time line variables in to their own module

2007-11-11 13:11  hartnell

	* NuMuBar/tools/sam.pl:


	More work on getting run period times set up.

2007-11-11 11:07  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/: docs/gbs_design.html, docs/gbs_index.html,
	  docs/gbs_programmer.html, docs/gbs_user.html,
	  python/bootstrap.py:

	Stop calling GBS vapourware given that it has run its first batch of
	jobs, albeit the internal dummy application, on the LCG GRID.  Move
	GridTools version onto V00-08-00 to record this little victory.

2007-11-11 10:43  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/jobs_edg.html:

	Document edg-job-get-logging-info

2007-11-11 10:43  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/setup/: setup_minos_oxford.csh,
	  setup_minos_oxford.sh:

	If run on SL3 revert to old scripts.

2007-11-11 10:43  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/: Scripts/docs/Scripts.html, docs/status_minos.html:

	The RAL T1 s/w disk now has space, but we will continue to use the SL4 disk.

2007-11-11 09:18  Robert Hatcher <rhatcher@fnal.gov>

	* DataQualityMonitoring/: ComparisonPlotModule.h,
	  DataQualityModule.h, DataQualityPlotModule.h,
	  DirectCompareModule.cxx, EfficiencyPurityModule.cxx,
	  EventRatePlotModule.h, RecoMonitoring.cxx, RecoMonitoringCR.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 09:13  Robert Hatcher <rhatcher@fnal.gov>

	* CalDetTracker/macros/: load_mc_tables.C, mcTracker.C,
	  writeMuCalibConstantsToDB.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 09:10  Robert Hatcher <rhatcher@fnal.gov>

	* CalDetDBUtils/LoadBeamErrors.cxx, CalDetDBUtils/LoadECuts.cxx,
	  CalDetDBUtils/LoadSuperCycle.cxx,
	  CalDetDBUtils/macros/TempvsTime.C, CalDetDST/BetterMCTables.cxx,
	  CalDetDST/LoadCalDetFilterChannels.cxx,
	  CalDetDST/LoadCalDetFilterChannels.h, CalDetDST/UberModule.cxx,
	  CalDetDST/UberModuleLite.cxx,
	  CalDetDST/macros/better_mc_tables.C, CalDetPID/AlgCalDetPID.cxx,
	  CalDetPID/AutoPIDMaker.cxx, CalDetPID/LoadCalDetPIDDB.cxx,
	  CalDetPID/bin/MakeBeamMomentumTable.cc,
	  CalDetPID/bin/MakeCERRangeTable.cc,
	  CalDetPID/bin/MakeCERTimeWinTable.cc,
	  CalDetPID/bin/MakeCERWinTable.cc,
	  CalDetPID/bin/MakeOverlapWinTable.cc,
	  CalDetPID/bin/MakeTOFRangeTable.cc,
	  CalDetPID/bin/ScanDbuSubRunSummary.cc,
	  CalDetPID/test/TestBeamMomentum.cc,
	  CalDetPID/test/TestCERRange.cc, CalDetPID/test/TestOverlapWin.cc,
	  CalDetPID/test/TestTOFRange.cc, CalDetSI/AlgCalDetSI.cxx,
	  CalDetSI/Cutter.cxx, CalDetSI/Helpers.cxx, CalDetSI/Helpers.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:58  Robert Hatcher <rhatcher@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, SKZPTestModule.cxx,
	  SystematicModule.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:55  Robert Hatcher <rhatcher@fnal.gov>

	* Mad/: MadTVAnalysis.cxx, MadTVAnalysis.h, macros/MakeDpHists.C,
	  macros/MakePanTest.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:47  Robert Hatcher <rhatcher@fnal.gov>

	* CandStripSR/StripSRListModule.cxx, CandTrackCam/AlgTrackCam.cxx,
	  CandTrackCam/AlgTrackCamList.cxx, Caryatid/CaryatidReco.cxx,
	  Caryatid/CaryatidReco.h, Cluster3D/AlgCluster3DList.cxx,
	  ControlRoomSoftware/TaggTicker/DispatchListener.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:44  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitTrackSR/AlgFitTrackSR.cxx, CandFitTrackSR/AlgFitTrackSR.h,
	  CandFitTrackSR/BFieldSR.cxx, CandFitTrackSR/SwimObjSR.cxx,
	  CandShield/ShieldGeom.cxx,
	  CandShield/macros/VetoEfficienciesDoubleEnd.C,
	  CandSliceSR/AlgSliceSRList.cxx, CandStripSR/AlgStripSRList.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:43  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitTrackCam/: AlgFitTrackCam.cxx, AlgFitTrackCamList.cxx,
	  FitTrackCamAnalysisModule.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...).  Also it's probably not
	an optimal choice to name a local variable the same as the namespace
	(both name and case) of its type.  The compiler seems to handle this
	okay, but it looks weird.

2007-11-11 08:37  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitTrack3/: AlgFitTrack3.cxx, SwimObj3.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:30  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitShowerEM/: AlgFitShowerEM.cxx, AlgFitShowerEM.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:26  Robert Hatcher <rhatcher@fnal.gov>

	* CandChop/AlgChopListGeneric.cxx, CandChop/AlgChopListMitre.cxx,
	  CandChop/AlgChopListPerfectMC.cxx, CandChop/AlgChopListSharp.cxx,
	  CandChop/AlgChopListSharp2.cxx,
	  CandChop/AlgStripListFromSliceList.cxx, CandChop/ChopHelper.cxx,
	  CandChop/ChopModule.cxx, CandClusterSR/AlgClusterSRList.cxx,
	  CandDigit/AlgFilterDigitList.cxx, CandDigit/AlgFilterDigitList.h,
	  CandEventSR/AlgEventSRList.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:23  Robert Hatcher <rhatcher@fnal.gov>

	* Calibrator/macros/: CompareSchemes.C, GenerateNdAttenConstants.C,
	  GenerateStripToStrip.C, demoAttenCalib.C, testDrift.C,
	  testLinearity.C, testMIPCalSchemeConfig.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:18  Robert Hatcher <rhatcher@fnal.gov>

	* BeamDataUtil/test/BDCheckDB.cxx,
	  BeamDataUtil/test/BDLivePlot.cxx, BeamDataUtil/test/BMS_STND.cxx,
	  BeamDataUtil/test/FileGap.cxx, BeamDataUtil/test/STND_BMS.cxx,
	  BeamDataUtil/test/StndBmsSpin.cxx, BubbleSpeak/cbatch.C,
	  BubbleSpeak/cbatch_mc.C, BubbleSpeak/cdisp.C,
	  BubbleSpeak/cdisp_mc.C, BubbleSpeak/cosmic.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:15  Robert Hatcher <rhatcher@fnal.gov>

	* BeamDataDbi/scripts/load_1084.C,
	  BeamDataDbi/test/PlotAllPeds.cxx, BeamDataDbi/test/PlotPeds.cxx,
	  BeamDataDbi/test/dump_peds.cxx,
	  BeamDataMonitoring/BDataQualityModule.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:11  Robert Hatcher <rhatcher@fnal.gov>

	* AtNuReco/AlgAtmosShowerList.cxx, AtNuReco/AlgShowerCam.cxx,
	  AtNuUtils/FarLayout.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:07  Robert Hatcher <rhatcher@fnal.gov>

	* AltReco/AltAlgSliceList.cxx, AltReco/AltAlgStpPatternRecList.cxx,
	  AtNuOutput/NtpMaker.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:04  Robert Hatcher <rhatcher@fnal.gov>

	* Alignment/DetectorAlignment/MakeAlignmentModule.cxx,
	  Alignment/DetectorAlignment/WriteAlignment.C,
	  AnalysisNtuples/Module/ANtpInfoObjectFillerBeam.cxx,
	  AnalysisNtuples/Module/ANtpInfoObjectFillerBeam.h,
	  AnalysisNtuples/Module/CondensedNtpModuleAtm.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 08:00  Robert Hatcher <rhatcher@fnal.gov>

	* LISummary/LIAnalysis.cxx, LISummary/LIGainCurve.cxx,
	  LISummary/LILookup.cxx, LISummary/LILookup.h, LISummary/LIPlex.C,
	  LISummary/LIPlexMaps.cxx, LISummary/LIPlexMaps.h,
	  LISummary/LIRun.cxx, LISummary/LIRun.h,
	  LISummary/LISummaryModule.cxx, LISummary/LISummarySorter.cxx,
	  LISummary/LISummarySorter.h, LISummary/LITuning.cxx,
	  LISummary/LITuning.h, LISummary/macros/DriftWithTime.C,
	  LISummary/macros/MakeCalAdcToPe.C,
	  LISummary/macros/MakeCalMIPCalibration.C,
	  LISummary/macros/MakeCalStripAtten.C,
	  LISummary/macros/MakeCalStripToStrip.C,
	  LISummary/macros/ReadDbGains.C,
	  LISummary/mskim/MakeCalAdcToPe2.C,
	  LISummary/mskim/ReadDbGains2.C,
	  DcsUser/scripts/ManualGaps_tail.C, BField/bfld_imap.C,
	  BField/bfld_slices.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:45  Robert Hatcher <rhatcher@fnal.gov>

	* DcsUser/: BfldDbiCoilState_Example.C, DbuHvFromSingles_Example.C,
	  macros/DrawDCS.C, macros/checkdcsext.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:41  Robert Hatcher <rhatcher@fnal.gov>

	* DatabaseMaintenance/DbmModule.cxx,
	  DatabaseInterface/test/DbiDemo.C,
	  DatabaseInterface/test/DbiDemo2.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:34  Robert Hatcher <rhatcher@fnal.gov>

	* DetSim/SimDetector.cxx, DetSim/macros/mc_li.C,
	  DetSim/tables/neargains.C, DetSim/tables/nearplex.C,
	  DetSim/tables/testplex.C, DeMux/AlgDeMuxBeam.cxx,
	  DeMux/DmxMuonPlane.cxx, DeMux/DmxShowerPlane.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:28  Robert Hatcher <rhatcher@fnal.gov>

	* GeoGeometry/GeoStripNode.cxx, GeoGeometry/macro/drawF001AVt.C,
	  GeoGeometry/macro/drawN001AUf.C, GeoGeometry/macro/drawN002AVp.C,
	  GeoGeometry/macro/drawN003AUp.C, GeoGeometry/macro/drawN006AVf.C,
	  GeoGeometry/macro/geoCalDetMCExport.C,
	  GeoGeometry/macro/geoFarMCExport.C,
	  GeoGeometry/macro/geoNearMCExport.C,
	  GeoGeometry/macro/testGeoDraw.C,
	  GeoGeometry/macro/testGeoDrawCalDet.C,
	  GeoGeometry/macro/testGeoDrawInCM.C,
	  GeoGeometry/macro/testGeoDrawNearDet.C,
	  GeoGeometry/macro/testGeoMultiple.C, Filtration/Blinder.cxx,
	  Filtration/StopMuFinderFactory.cxx, EventDisplay/EVD.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:23  Robert Hatcher <rhatcher@fnal.gov>

	* GeoSwimmer/GeoSwimmer.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:19  Robert Hatcher <rhatcher@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx, NCUtils/NCType.cxx,
	  NCUtils/NCType.h, MCReweight/Zbeam.cxx,
	  MCReweight/macros/test_beam_weight.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:17  Robert Hatcher <rhatcher@fnal.gov>

	* MINF_Classes/: MINFDetGeom.cxx, MINFOutline.cxx, MINFOutline.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(here not related to the Conventions namespace, but change it anyway)

2007-11-11 07:13  Robert Hatcher <rhatcher@fnal.gov>

	* Midad/: Base/Mint.cxx, Base/Mint.h, Base/PageDisplay.cxx,
	  Base/PmtPixels.cxx, Base/PmtPixels.h, Base/SteelOutline.cxx,
	  Base/SteelOutline.h, MultiPage/MultiPage.cxx,
	  UserDisplay/UserDisplayModule.cxx, macros/pixeldump.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 07:01  Robert Hatcher <rhatcher@fnal.gov>

	* MiniBooNEAna/CountPot.cxx, MiniBooNEAna/Fill_MBSpill.cxx,
	  MiniBooNEAna/MNtpModule.h, MeuCal/MeuCuts.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:55  Robert Hatcher <rhatcher@fnal.gov>

	* Morgue/macros/badHardwareExample.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:51  Robert Hatcher <rhatcher@fnal.gov>

	* NCUtils/: Cuts/NCAnalysisCuts.cxx, Cuts/NCAnalysisCutsCR.cxx,
	  Cuts/NCAnalysisCutsTO.cxx, Extraction/NCAnalysisReader.cxx,
	  Extraction/NCExtractionDP.cxx, Extraction/NCExtractionNS.cxx,
	  Extraction/NCExtractionPL.cxx, Extraction/NCExtractionRPann.cxx,
	  Extraction/NCExtractionResultsADM.cxx,
	  Extraction/NCExtractionResultsADM.h,
	  Extraction/NCExtractionTO.cxx, Extraction/NCExtractionTR.cxx,
	  Extraction/NCExtractionTRann.cxx,
	  Extrapolation/NCExtrapolation.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:41  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/EnergyCorrections.cxx, DataUtil/EnergyCorrections.h,
	  DataUtil/GetDetector.cxx, DataUtil/GetDetector.h,
	  DataUtil/GetDetectorType.cxx, DataUtil/GetDetectorType.h,
	  DataUtil/MCInfo.cxx, DataUtil/MCInfo.h,
	  NtupleUtils/NuFluxHelper.cxx, NtupleUtils/NuReco.cxx,
	  NtupleUtils/SRMom.cxx, NtupleUtils/SRMom.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:19  Robert Hatcher <rhatcher@fnal.gov>

	* PhotonTransport/macros/test/blue.C,
	  PhotonTransport/macros/test/blue_ends.C,
	  PhotonTransport/macros/test/blue_pdf.C,
	  PhotonTransport/macros/test/green.C,
	  PhotonTransport/macros/test/photons.C,
	  ParticleTransportSim/macro/PTSim_GUI.C,
	  ParticleTransportSim/vld/CosmicLE/genCosmicVtxHist.C,
	  PEGain/macros/writeGainsToDb.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:13  Robert Hatcher <rhatcher@fnal.gov>

	* Plex/scripts/test_unique.C, Plex/scripts/validate_plpio.C,
	  PhotonTransport/toyMC/ToyMCModule.cxx,
	  PhotonTransport/toyMC/toymc.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:09  Robert Hatcher <rhatcher@fnal.gov>

	* SpillTiming/macros/insert_bounds.C,
	  SpillTiming/macros/lootSpillTimes.C,
	  SpillTiming/macros/lootTimeWatcher.C,
	  SpillTiming/macros/potAdder.C, RunSummary/macros/runtype.C,
	  PulserCalibration/CheckNdNonlinQuad.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:05  Robert Hatcher <rhatcher@fnal.gov>

	* UgliGeometry/scripts/ugli_iter.C,
	  UgliGeometry/scripts/veto_dbi_check2.C,
	  UgliGeometry/scripts/veto_dbi_draw.C,
	  UgliGeometry/scripts/veto_dbi_place2.C,
	  UgliGeometry/scripts/veto_dbi_placements.C,
	  TriD/macros/saveplex.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 06:00  Robert Hatcher <rhatcher@fnal.gov>

	* Morgue/Coroner.cxx,
	  WebDocs/ntuple_examples/makeproxy/printheader.C,
	  Validation/macros/pixeldump.C:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:56  Robert Hatcher <rhatcher@fnal.gov>

	* PulserCalibration/ndQuadFit.C, NoiseFilter/NoiseFilterModule.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:51  Robert Hatcher <rhatcher@fnal.gov>

	* SpillTiming/: FillSpillServerMon.cxx, NDSgateTimeLooter.cxx,
	  SpillFunctions.cxx, SpillTimeFinder.cxx,
	  looter/lootSpillFiles.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:44  Robert Hatcher <rhatcher@fnal.gov>

	* PEGain/PEGainModule.cxx, PhotonTransport/PhotonInjector.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:27  Robert Hatcher <rhatcher@fnal.gov>

	* SexyPedestal/SexyPedReco.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:26  Robert Hatcher <rhatcher@fnal.gov>

	* RecoBase/AlgTrack.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...).  Also local variables probably
	shouldn't have the same name/case as the namespace of their type -- the
	compiler apparently can deal with it but it looks weird.

2007-11-11 05:18  Robert Hatcher <rhatcher@fnal.gov>

	* DatabaseInterface/DbiValidityRecBuilder.cxx,
	  DatabaseInterface/test/DbiValidate.cc,
	  DatabaseInterface/test/TestDbi.cc, BField/test/BfldDebugData.cc,
	  BField/test/MakeGridUsingVor.cc, BField/test/Utils.cc:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:13  Robert Hatcher <rhatcher@fnal.gov>

	* GeoGeometry/test/: GeoCheckOverlaps.cc, GeoValidate.cc:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:07  Robert Hatcher <rhatcher@fnal.gov>

	* Rotorooter/rotorooter.cc, Record/test/RecValidate.cc,
	  Persistency/test/DemoDaq.cc:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 05:02  Robert Hatcher <rhatcher@fnal.gov>

	* BubbleSpeak/: AlgDigiPairList.cxx, SelectCherenkov.cxx,
	  SelectCosmic.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 04:58  Robert Hatcher <rhatcher@fnal.gov>

	* VertexFinder/Module/NtpVtxFinder.cxx,
	  VertexFinder/Module/ValVtxModule.cxx,
	  VertexFinder/Module/VtxFinderAna.cxx,
	  VertexFinder/NtpVtxFinder/NtpVtxFinder.cxx,
	  Swimmer/test/TestSwimmer.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 04:52  Robert Hatcher <rhatcher@fnal.gov>

	* VADynodeScan/AnaDynThrScan.cxx,
	  TimeCalibratorSR/TimeCalibratorSRModule.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 04:48  Robert Hatcher <rhatcher@fnal.gov>

	* VertexFinder/VertexFinder.cxx,
	  VALinCalibration/VALinCalibration.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 04:42  Robert Hatcher <rhatcher@fnal.gov>

	* StupidGeometry/: StupidGeomHandle.cxx, StupidGeomHandle.h,
	  StupidStripHandle.cxx, StupidStripHandle.h:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 04:37  Robert Hatcher <rhatcher@fnal.gov>

	* Swimmer/: SwimGeo.cxx, SwimGeo.h, SwimSwimmer.cxx:

	Part of the ongoing purge of "DetectorType" in favor of "Detector"
	(the former is a synonym of the latter ...)

2007-11-11 04:19  Robert Hatcher <rhatcher@fnal.gov>

	* NueAna/NueStandard.h:

	Fix syntax to avoid "error: explicit qualification in declaration of
	`bool NueStandard::PassesCCSelection(NueRecord*)'" -- the declaration
	within the namespace is sufficient, under gcc 4.x having it explicitly
	there is considered an error.

2007-11-11 04:15  Robert Hatcher <rhatcher@fnal.gov>

	* NueAna/: FracVarAna.cxx, HighHitVarsAna.cxx:

	A few variables were being declared "float_t" (vs. ROOT type "Float_t")
	which isn't a defined type on some systems.

2007-11-10 23:01  nwest

	* GridTools/Ganga/GBS/python/GBSTask.py:

	GBSTask can now submits sets of jobs incrementally up to a imposed
	limit.  It also has detailed job statistics reporting on the number
	of jobs in each major grouping.

	Add methods:-

	  GetMaxGangaJobs()
	  GetMaxSubmitJobs()
	  EnableSubmit(enable=True)
	  RefreshJobStats()
	  SetMaxGangaJobs(n)
	  SetMaxSubmitJobs()
	  SubmitJobs()
	  UpdateJobsStatus()

	Add permanent state:-

	  self.__submitEnabled
	  self.__maxGangaJobs
	  self.__maxSubmitJobs

	and volatile state:-

	   self.__jstatAll         Job stats: All
	   self.__jstatHeldAll     Job stats: Held - all
	   self.__jstatHeldOther   Job stats: Held - other than placed on hold
	   self.__jstatWaitAll     Job stats: Waiting to run - all
	   self.__jstatWaitRetry   Job stats: Waiting to run - retries
	   self.__jstatSubmitAll   Job stats: Submitted to Ganga - all
	   self.__jstatSubmitNRun  Job stats: Submitted to Ganga - but not running
	   self.__jstatDoneAll     Job stats: Done - all
	   self.__jstatDoneFail    Job stats: Done - Failed

2007-11-10 23:01  nwest

	* GridTools/Ganga/GBS/python/GBSLogger.py:

	Add method: GetLoggerThreshold()

2007-11-10 23:01  nwest

	* GridTools/Ganga/GBS/python/GBSJob.py:

	Only print submitted Ganga job if logger threshold at SYNOPSIS or lower.
	After each state change call parent task"s RefreshJobStats() method.

2007-11-10 23:01  nwest

	* GridTools/Ganga/GBS/: docs/gbs_user.html, python/.gbsrc:

	Define new configuration variables:-
	  DefaultMaxGangaJobs
	  DefaultMaxSubmitJobs

2007-11-10 20:11  George Irwin <gmieg@slac.stanford.edu>

	* setup/packages-S07-11-10-R1-26:

	First commit

2007-11-10 19:38  hartnell

	* NuMuBar/tools/sam.pl:


	Further progress on defining the times of various data sets to be
	declared to SAM.

2007-11-10 16:46  Sue Kasahara <schubert@hep.umn.edu>

	* Rotorooter/RotoObjectifier.cxx:


	Create a job history record for the Daq produced RawRecord.

2007-11-10 16:42  Sue Kasahara <schubert@hep.umn.edu>

	* StandardNtuple/Module/NtpStModule.cxx:


	Add job history to NtpStRecord.

2007-11-10 16:38  Sue Kasahara <schubert@hep.umn.edu>

	* TruthHelperNtuple/Module/NtpTHModule.cxx:


	Add job history to newly created NtpTHRecord.

2007-11-10 16:34  Sue Kasahara <schubert@hep.umn.edu>

	* CandNtupleSR/Module/NtpSRModule.cxx:


	Add job history to newly created NtpSRRecord.

2007-11-10 16:29  Sue Kasahara <schubert@hep.umn.edu>

	* MCNtuple/Module/NtpMCModule.cxx:


	Add job history to newly created NtpMCRecord.

2007-11-10 16:24  Sue Kasahara <schubert@hep.umn.edu>

	* CandData/RecordSetupModule.cxx:


	Add job history to newly created CandRecord.

2007-11-10 16:22  Sue Kasahara <schubert@hep.umn.edu>

	* DetSim/DetSim.cxx:


	Add job history to freshly created RawRecord.

2007-11-10 16:19  Sue Kasahara <schubert@hep.umn.edu>

	* PhotonTransport/PhotonTransport.cxx:


	Add PhotonTransport job history to SimSnarlRecord.

2007-11-10 16:15  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/PTSimModule.cxx:


	Add PTSim job history to SimSnarlRecord.

2007-11-10 16:08  Sue Kasahara <schubert@hep.umn.edu>

	* RerootExodus/RerootToTruthModule.cxx:


	Add the GMinos job history to the record.

2007-11-10 16:05  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecJobHistory.cxx, RecJobHistory.h, RecJobRecord.cxx,
	  RecJobRecord.h, RecMinos.h, RecRecordImp.h:


	Modify RecJobRecord to inherit from Registry.
	Add method & data member:
	   virtual const RecJobHistory& GetJobHistory() const { return fJobHistory; }
	   RecJobHistory      fJobHistory;   // info about jobs used to create/fill rec
	to record bases classes RecRecordImp(version upgrade 2->3) and
	RecMinos (version upgrade 1->2)

2007-11-10 13:02  hartnell

	* NuMuBar/tools/sam.pl:


	Added the dates of the april showers

2007-11-10 07:41  nwest

	* DatabaseInterface/DbiWriter.tpl:

	NeedsLogEntry(): Add CANDDIGITBADCHANNELS.  Probably pointless, but also harmless.  Fix to test on CAL

2007-11-10 07:27  nwest

	* DatabaseMaintenance/scripts/make_priming_set.pm:

	Add CANDDIGITBADCHANNELS

2007-11-09 19:46  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTask.py:

	Introduce the idea of "ProtoJobs"

	Protojobs allow users to create large numbers of jobs automatically
	using scripts or data files and review and correct them before
	"promoting" them into jobs.  As such they are easy to create and
	destroy, are not persisted and are consequently lost at program
	termination, unless promoted.

	Add class: GBSProtoJob

	Add methods:-

	  AddProtoJob(job_name,args_str)
	  PromoteProtoJobs(job_name_pattern)
	  RemoveProtoJobs(job_name_pattern)

	Revise method:-

	  ListJobs(job_name_pattern = ".*")
	   -  now takes a pattern matching arg and sorts list into order.

2007-11-09 19:39  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJob.py:

	Cosmetic changes to print out and order in which functions defined.

2007-11-09 18:09  hartnell

	* CandDigit/AlgFilterDigitList.cxx:


	Remove an excess line of printout

2007-11-09 17:45  hartnell

	* CandDigit/macros/writeBadChannelsToDB.C:


	Minor improvements

2007-11-09 17:29  hartnell

	* CandDigit/macros/writeBadChannelsToDB.C:


	Macro for adding bad channels into the database

2007-11-09 16:38  hartnell

	* CandDigit/AlgFilterDigitList.cxx:


	Remove a section of commented out code

2007-11-09 16:25  hartnell

	* CandDigit/: AlgFilterDigitList.cxx, AlgFilterDigitList.h,
	  CandDigitBadChannels.cxx, CandDigitBadChannels.h, GNUmakefile,
	  LinkDef.h:


	Added CandDigitBadChannels to read in the CANDDIGITBADCHANNELS
	database table.

	AlgFilterDigitList now has a new filter strategy = 3. This does
	strategy 1 plus it uses the database table to remove additional bad
	channels. This is currently not the default. I will give the database
	table a few days to propagate before making it the default (since the
	code crashes if it can't find the table).

	The GNUmakefile had to be told where to look for the Dbi template
	classes.

2007-11-09 15:57  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h, macros/nearFarExtrapolation.C,
	  macros/nearFarExtrapolationData.C,
	  macros/nearFarExtrapolationMC.C:


	change 1D projections from being histograms to graphs.  have macros take
	the ouput directory for the file as an argument

2007-11-09 15:52  nwest

	* GridTools/Ganga/GBS/: docs/gbs_design.html,
	  docs/gbs_programmer.html, python/GBSIdCodes.py, python/GBSJob.py,
	  python/GBSJobAnalyser.py, python/GBSJobManager.py,
	  python/GBSManager.py, python/GBSObject.py, python/GBSTask.py,
	  python/GBSTaskManager.py, python/GBSTaskMaster.py,
	  python/bootstrap.py, python/register_models.py:

	Wholesale rename (I got bored with the long names):-

	  JobManager  -> Job
	  TaskManager -> Task
	  TaskMaster  -> Manager

2007-11-09 15:50  hartnell

	* NuMuBar/macros/mContainment.C:


	Macro to make resolution plots

2007-11-09 15:00  nwest

	* GridTools/Ganga/GBS/python/: GBSJobManager.py, GBSTaskManager.py,
	  GBSTaskMaster.py:

	Improve object printout

2007-11-09 13:51  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	reco_MC() now points to the correct function.

2007-11-09 10:34  nwest

	* GridTools/Ganga/docs/ganga.html:

	Using Job.peek() method to look at output.

2007-11-09 10:34  nwest

	* GridTools/Ganga/GBS/python/gbs_test_application_script.sh:

	Improve the listing of the args passed in.

2007-11-09 10:34  nwest

	* GridTools/Ganga/GBS/python/GBSTaskManager.py:

	Add methods:-
	  GetScriptGlobalArgs()
	  SetScriptGlobalArgs(args_str)
	    plus associated state.

	Change:-
	  AddJobManager(job_name,script_local_args_str = "")  Now JobManagers named by caller

2007-11-09 10:34  nwest

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Add methods:-
	  GetScriptLocalArgs()
	  SetScriptLocalArgs(args_str)
	    plus associated state.

	Change:-
	  Submit()  Now compiles arg list from global (i.e. TaskMaster) and local set.

2007-11-08 21:06  Robert Hatcher <rhatcher@fnal.gov>

	* BField/BfldLoanPool.cxx:

	Make the default for ApplyBdotScale to be _off_ until we actually have
	some numbers and have validated that we actually want to use them.

2007-11-08 20:11  pawloski

	* DataUtil/MasterGeVPerMip.cxx:

	Updated GeVPerMip Numbers

2007-11-08 18:13  bckhouse

	* NCUtils/Extrapolation/NCExtrapolationModule.cxx:

	Fix typo - now TryPrevious minimum isn't always on.

2007-11-08 17:53  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_MC_daikon_near_cosmic_cedar_phy.C:

	Supress photon warnings.

2007-11-08 17:20  nwest

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Bug fixes: Use shutil.rmtree not os.rmdir to remove directory trees.
	           For LCG backend the attribute is 'CE' not 'queue'.

2007-11-08 17:17  nwest

	* GridTools/Ganga/GBS/python/GBSIOHelper.py:

	Fix bug that resulted in floats and integers being returned as strings.

2007-11-08 16:34  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/util/set_ntpst_output_bntp.h:

	Always set NtpSt stream.

2007-11-08 15:54  bckhouse

	* NCUtils/macros/: nearFarExtrapolation.C,
	  nearFarExtrapolationData.C, nearFarExtrapolationMC.C,
	  nearFarExtrapolationSyst.C:

	Add TryPreviousMinimum to macros.

2007-11-08 15:49  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h,
	  NCExtrapolationModule.cxx:

	Remove obsolete fWant variables.

	Add an option TryPreviousMinimum, off by default. Before each Minuit minimization, first test if we are already within prec of the minimum, if so, return the old value. Enabling this should slightly speed up the contour finding and projections, with a danger of introducing artifacts into the contours.

2007-11-08 14:38  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/: LinkDef.h, MasterGeVPerMip.cxx, MasterGeVPerMip.h:

	By request rename the syntactic sugar functions:
	   get_gevpermip(Detector::Detector_t)
	   choose_gevpermip_release(string|ReleaseType)
	   new_gevpermip_release(string|ReleaseType,near,far,caldet)

2007-11-08 14:38  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskManager.py:

	Add state: __backend and initialise to default value.
	Add methods: GetBackend() and SetBackend(backend)

2007-11-08 14:38  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Use Parents Backend setting to configure job.

2007-11-08 14:37  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/: docs/gbs_user.html, python/.gbsrc:

	Add configuration variable DefaultBackend

2007-11-08 13:53  musser

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	add code to support strip rotations.  New code is not currently activated as there are no rotations in the current geometry dB and so testing in not possible.

2007-11-08 13:50  musser

	* RecoBase/: CandStripHandle.cxx, CandStripHandle.h:

	add support for strip rotations through new GetTPos(orthopos) method

2007-11-08 13:25  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Supress Photon errors and (try to) supress TrackCam warnings.

2007-11-08 13:19  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Clean up script a little.

2007-11-08 12:34  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/: docs/gbs_programmer.html,
	  python/GBSIOHelper.py, python/GBSJobAnalyser.py,
	  python/GBSJobManager.py, python/GBSObject.py,
	  python/GBSTaskManager.py, python/GBSTaskMaster.py,
	  python/bootstrap.py:

	Formalise rules on public, "protected" and private data and members
	functions and implement in the code.

2007-11-08 10:22  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/: docs/gbs_programmer.html,
	  python/GBSIOHelper.py:

	Add support for a simple schema evolution system

2007-11-07 23:17  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_user.html:

	Document new configuration variables.

2007-11-07 22:48  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_programmer.html:

	Spell out what JobManager state changes when a job output is analysed

2007-11-07 22:47  dap56

	* Monitoring/DigitAnalysis.cxx:

	bug fix - new #planes distributions were not being reset at the end of each run.

2007-11-07 22:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_design.html:

	Minor refinement to job analysis model: now JobAnalyser does the update, not the JobManager

2007-11-07 22:42  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/gbs_test_application_script.sh:

	Extend dummy test application which signals back RETRY with different
	retry args until it gets the ones it wants and then signals back
	success. GBS managed to submit Ganga jobs (to local back end) and push
	this job through to completion.  Still a very long way to go but at
	last proof of principle.

2007-11-07 22:42  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Add state __retryArgs, needed in case job fails to return retry args
	from the application.

	Update Submit() so that it properly uses the retry args from one step
	when submitting the next.  The application script call args are still
	just hardwired though.

	Update UpdateStatus() method so that it it receives output back from
	Ganga it uses GBSJobAnalyser to analyse and update ready for next try.

2007-11-07 22:42  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobAnalyser.py:

	Flesh out the object so that it can analyse the GLF, decide what to do
	next and move job onto next phase.

2007-11-07 22:42  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSIdCodes.py:

	Add functions to returns strings for JSC, CLC and FCC codes.

2007-11-07 22:42  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/: GBSConfig.py, GBSLogger.py:

	Make GBSConfig depend on GBSLogger rather than the other way round so
	that GBSConfig can report requests for bad keys to the logger.

2007-11-07 22:42  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/.gbsrc:

	Add the configuration variables:-
	  MaxRetryEarlyFails
	  MaxRetryLateFailsHandled
	  MaxRetryLateFailsUnhandled
	  MaxTimeEarlyFails

2007-11-07 22:08  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/: nearFarExtrapolation.C,
	  nearFarExtrapolationData.C:

	make other macros handle the new input for the oscillation model

2007-11-07 21:50  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  macros/nearFarExtrapolationMC.C:

	fix bug in assignment of start and end values in MakeDeltaChiSqrMapsHybrid

	change macro to take oscillation model as a parameter and set things based
	on it.

2007-11-07 20:38  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	add vectors to hold the parameter names, axis labels, start and end values
	for each physics parameter being fit.  the idea is that with 3 different
	possible oscillation models there needs to be a way to smoothly switch
	these values for the output.  the vectors are filled in the prepare method
	based on the oscillation model being used. the vectors are used in the
	fitting and plotting methods.

2007-11-07 19:29  rodriges

	* Contrib/pidtf/PanCreationMacros/: countAllPOTs.sh,
	  countMCPOTs.sh, countPOTs.C, makeFidPan.C, mkFidPan.sh,
	  mkSKZPWeights.sh, skzpweight.C:

	Various updates and improvements to scripts

2007-11-07 19:25  rodriges

	* Contrib/pidtf/DataMCPlots/POTCounter.C:

	Add this for completeness - not actually used at the moment

2007-11-07 19:23  boehm

	* NueAna/Sensitivity/NueSensitivity.cxx:

	Out systematic errors should be calculated on the expected not the observed background.

2007-11-07 19:23  rodriges

	* Contrib/pidtf/DataMCPlots/: runDataMC_AB.C, runDataMC_NS.C,
	  runDataMC_RO.C, wrapper_AB.C, wrapper_NS.C, wrapper_RO.C:

	PID-specific wrapper scripts

2007-11-07 19:21  rodriges

	* Contrib/pidtf/DataMCPlots/: HistMaker.cxx, HistMaker.h:

	General changes and improvements:
	* Include MC errors, since the statistics are ~ the same as data
	* Compute L1 distance as a data/MC agreement statistic
	* Produce a histogram of normalized residuals

2007-11-07 19:17  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/set_msg_levels_mc_cosmic.h:

	Supress photon warnings.

2007-11-07 18:48  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/PTSimModule.cxx:


	Add call to:
	  mcapp.InitSnarl(vldc);
	in PTSimModule::Reco.

2007-11-07 18:47  Sue Kasahara <schubert@hep.umn.edu>

	* GeoSwimmer/GeoSwimmer.cxx:


	Add:
	 mcapp.InitSnarl(vldc);
	to GeoSwimmer::Initialize

2007-11-07 18:45  Sue Kasahara <schubert@hep.umn.edu>

	* MCApplication/: MCApplication.cxx, MCApplication.h:


	New method:
	virtual bool InitSnarl(const VldContext& vldc);
	To be invoked once per snarl.  The argument is used to reinitialize the
	BField and to check that the geometry with which the VMC was initialized
	has a compatible vldrange with the current vldcontext.

2007-11-07 18:43  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, Extrapolation/NCExtrapolation.cxx:

	bug fixes to be able to run the parke model special cases fit

2007-11-07 18:43  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_MC_daikon_near_cosmic_cedar_phy.C:

	Use correct CalSchemes

2007-11-07 18:34  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/mc_reco_cosmic/mc_reco_cosmic_create_path.h:

	Remember to return the path.

2007-11-07 18:31  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cosmic_cedar_phy.C,
	  headers/mc_reco_cosmic/mc_reco_cosmic_create_path.h:

	Cosmics also needed a different path.

2007-11-07 18:13  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/mc_reco_cosmic/mc_reco_cosmic_configure_shower.h:

	Pass path reference not pointer.

2007-11-07 18:09  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cosmic_cedar_phy.C,
	  headers/mc_reco_cosmic/mc_reco_cosmic_configure.h,
	  headers/mc_reco_cosmic/mc_reco_cosmic_configure_shower.h:

	Fix reco_MC_daikon_near_cosmic_cedar_phy to use cosmic configuration settings.

2007-11-07 17:56  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_MC_daikon_near_cosmic_cedar_phy.C:

	Set GetApplyRollback=1

2007-11-07 17:04  bckhouse

	* Production/Cedar_phy/restructure-chris/reco_far_all_cedar_phy.C:

	Unswap ntuple and cand filenames.

2007-11-07 16:49  asousa

	* CVSROOT/check_access:

	Giving Jeff H. write permissions to CandDigit and DatabaseUpdater. Had to insert a new "DatabaseUpdater" line. I'm guessing that package was only ever modified by core group members.

2007-11-07 16:37  bckhouse

	* Production/Cedar_phy/restructure-chris/reco_far_all_cedar_phy.C:

	Correct ntuple name.

2007-11-07 16:28  bckhouse

	* Production/Cedar_phy/restructure-chris/reco_far_all_cedar_phy.C:

	Specify ntuple filename.

2007-11-07 16:25  bckhouse

	* Production/Cedar_phy/restructure-chris/reco_far_all_cedar_phy.C:

	Call use_new_hv_table on correct path.

2007-11-07 15:30  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/concatenate_contours.C:

	commit code to overlay phi tests as well

2007-11-07 15:29  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_far_spill_cedar_phy.C:

	Name blinded ntuple correctly.

2007-11-07 14:31  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/util/set_ntpst_output_bntp.h:

	Don't define streams twice.

2007-11-07 10:15  nwest

	* GridTools/Scripts/setup/: setup_minos_oxford.csh,
	  setup_minos_oxford.sh:

	Keep copy of non-standard Oxford top level setup scripts for archival purposes

2007-11-07 09:18  nwest

	* GridTools/docs/ChangeLog:

	DCM Improve error reporting.

2007-11-07 09:18  nwest

	* GridTools/DataCacheManager/frs_run_jobs.pm:

	Remove "-" from "ps -h", it was never required and in SL4 causes a warning.

2007-11-07 09:18  nwest

	* GridTools/DataCacheManager/: frs_get_local_dest_dir.pm,
	  frs_put_all_files.pm, frs_retrieve_next_batch.pm, init.pm,
	  terminate.pm, docs/dcm.html, minos/frs_locate_file.pm:

	Accumulate a list of errors in $SYS::global_err_msgs and exit
	with error if not empty at termination.

2007-11-07 09:18  nwest

	* GridTools/DataCacheManager/dcm_frs_job.pm:

	Bug fix: If termination message doesn"t conform, add "?" to start.

2007-11-07 05:14  Robert Hatcher <rhatcher@fnal.gov>

	* BField/bfld_slices.C:

	some modifications that have been sitting on my laptop too long ...

2007-11-07 05:10  Robert Hatcher <rhatcher@fnal.gov>

	* BField/BField.cxx:

	Ooops, BFromLineSource calculation was missing a factor of "1/r".

2007-11-07 00:10  nwest

	* GridTools/Ganga/GBS/python/: GBSTaskManager.py, GBSTaskMaster.py:

	Strip out NameError handling as all it catches if compilation
	failures, which it also hides so make hard to fix!

2007-11-07 00:10  nwest

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Use revised Job Status Codes.
	Add method GetGbsLogFileName(self).
	Temporarily add method Analyse(self) to test out JobAnalyser.

2007-11-07 00:10  nwest

	* GridTools/Ganga/GBS/python/: GBSJobAnalyser.py,
	  register_models.py:

	Start work on the JobAnalyser.  Data collection partially done.

2007-11-07 00:09  nwest

	* GridTools/Ganga/GBS/python/GBSIdCodes.py:

	Develop Job Status Codes.
	Add Communication Level Codes and Failure Category Codes

2007-11-07 00:09  nwest

	* GridTools/Ganga/GBS/docs/gbs_design.html:

	Introduce the concept of a JobAnalyser and its purpose.
	Lay down convention for "communication level" analysis.

2007-11-06 23:05  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	center axis labels in output contours and chi^2 plots

2007-11-06 22:30  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/check_access:

	Add pawloski to DataUtil so that he can update GeVPerMip #'s.

2007-11-06 22:15  dap56

	* Monitoring/: DigitAnalysis.cxx, DigitAnalysis.h,
	  Producer_dispatcher.cc, SinglAnalysis.cxx:

	FD OM changes/additions:
	------------------------

	1) Number of planes distribution now plotted separately for cosmic, true spill trigger and fake spill trigger snarls. New checklist canvas, "Number of Planes" created to display these.

	2) Tweaks to singles plot ranges/scaling

	   - shield singles rates now scaled down by a factor of 40 (was 20) to improve uniformity of 1D and 2D singles rate plots

	   - range tweaked on min and mean/current singles rate plots

	   - ranges tweaked on singles rate frequency plots (both ND and FD)

2007-11-06 22:07  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/MasterGeVPerMip.cxx:

	Save, *then* commit...
	Oh, and at this stage NONE of the values should be assumed to be in
	the slightest way correct or official.  The code is there as a example
	placeholder not because the values have been validated.

2007-11-06 22:06  Brett Viren <bv@bnl.gov>

	* CVSROOT/check_access:

	Add Laura to some of the BeamData packages

2007-11-06 22:04  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/: LinkDef.h, MasterGeVPerMip.cxx, MasterGeVPerMip.h:

	A new class (MasterGeVPerMip) for managing sets of, well, GeV-per-MIP values.

2007-11-06 21:14  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h, NCOscProb.cxx,
	  NCOscProb.h, NCType.h, Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationModule.cxx,
	  macros/nearFarExtrapolationMC.C:

	changes for using multiple oscillation models.

	NCExtrapolationModule::FindEventWeight - make sure to tell NCAnalysisUtils
	to actually use the oscillation probability functions.

	elsewhere - make sure to set the fOscillationModel data members where needed,
	add comments to make lists of parameters less opaque, setup special cases
	to parke model rather than calling them extended model 1, remove duplicated
	data members in NCExtrapolation, also make it print out to screen which
	oscillation model it is using.

2007-11-06 18:34  hartnell

	* NtupleUtils/: NuMatrixFitter.cxx, NuMatrixFitter.h,
	  NuMatrixMethod.cxx, NuMatrixMethod.h:


	Modified by Justin and I to output the set of files needed for an
	external fitter to fit for dm2bar, etc.

2007-11-06 18:14  bckhouse

	* Production/Cedar_phy/srsafitter/:
	  reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  reco_MC_daikon_near_cosmic_cedar_phy_srsafitter2.C:

	Use the new version of the script as it is apparently working.

2007-11-06 17:57  musser

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	remove diagnostic cout

2007-11-06 17:50  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter2.C:

	Fix name of macro function.
	Remove redundant sql override.

2007-11-06 15:55  boehm

	* NueAna/: NueStandard.cxx, NueStandard.h,
	  Extrapolation/Comparator.cxx, Extrapolation/NueExtrapHelper.cxx,
	  Extrapolation/NueExtrapolation.cxx,
	  Extrapolation/NueExtrapolation.h,
	  Extrapolation/NuePrediction.cxx, NueAnaTools/Selection.cxx,
	  NueAnaTools/Selection.h:

	A handful of random updates mostly geared toward the extrapolation code:

	Selection:
	Added kCC as a seleection type, this is meant to be the full numu CC selection (or at least a close equivalent of it)
	currently it takes our fiducial volume instead of theirs and is not at the moment making the track sign cut as part of the standard
	this is rationalized as we may not want to cut out the anti-nu flux when we use this spectrum for our purposes.

	NueStandard:
	There are now explicitly both PassesMRCC and PassesMRE functions, both give the same result but made be more
	intuitive to people depdning on their project.

	PassesCCSelection - see above comment for the modification to Selection

	Extrapolation - modified the ExtrapHelper to make use of CC groups energy, also removed an unnecessary arguement from the Extrapolation chain.

2007-11-06 14:50  Robert Hatcher <rhatcher@fnal.gov>

	* Production/asciidb/set_tsql_override.C:

	Prevent accidental duplication of catalogues in the ENV_TSQL_URL.

2007-11-06 13:57  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter2.C:

	3rd attempt to write this script...
	If it works will move to correct name.

2007-11-06 13:29  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_far_spill_cedar_phy.C:

	Apply new HV table to correct branch of the path.

2007-11-06 13:14  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Find a less noisy way to check for missing dccp

2007-11-06 13:12  nwest

	* GridTools/:
	  RemoteSoftwareDeployment/libs_and_builds/assemble_daikon_scripts.sh,
	  RemoteSoftwareDeployment/libs_and_builds/install_daikon_scripts.sh,
	  docs/ChangeLog:

	daikon_scripts tar now assembled from CVS as drop in replacement
	for those found on /afs/fnal.gov/files/code/e875/sim/daikon_versions.

2007-11-06 12:02  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h,
	  NCExtrapolationJK_fit.cxx, NCExtrapolationMQ.cxx:

	Remove all the arguments to MakeDeltaChiSqrMaps, use member variables instead. This is all the derived classes were passing in anyway.

2007-11-06 11:59  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_far_spill_cedar_phy.C:

	Typo.

2007-11-06 11:27  evans

	* NtupleUtils/macros/TestCCAnalysis.C:

	Adding the macro that runs the matrix method extrapolation and fit.

2007-11-06 11:20  bckhouse

	* NCUtils/Extrapolation/NCExtrapolationModule.cxx:

	Missed a file.

2007-11-06 11:10  bckhouse

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h, macros/nearFarExtrapolation.C,
	  macros/nearFarExtrapolationMC.C,
	  macros/nearFarExtrapolationSyst.C:

	Add options "WantMinimum" and "WantProjection".
	This allows the projections to be switched off, or conversly for them to be found without first finding the minimum.
	Requesting any contours implies WantMinimum.

2007-11-06 09:10  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/index.html:

	Fix broken link to GBS (now gbs_index.html).

2007-11-06 09:10  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/ChangeLog:

	GBS code development. RSD/Scripts support CedarDaikon04.

2007-11-06 09:10  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/docs/Scripts.html:

	Fix typos it"s not: MOG_SCRIPT/job/ but: MOG_SCRIPTS/jobs/

2007-11-06 09:10  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/: RemoteSoftwareDeployment/doc/rsd.html,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  Scripts/setup/setup_minos_lcg_grid.sh:

	Setup recognises any CedarDaikon* (now that current is CedarDaikon04).

2007-11-06 09:10  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/: Ganga/GBS/docs/gbs_design.html,
	  Ganga/GBS/docs/gbs_index.html,
	  Ganga/GBS/docs/gbs_programmer.html, Ganga/GBS/docs/gbs_user.html,
	  Ganga/GBS/python/bootstrap.py,
	  Scripts/maintenance/propagate_version_number.sh,
	  Scripts/maintenance/version_number:

	Add GridTools version number to GBS.

2007-11-06 00:00  nwest

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Begin work on UpdateStatus(self) method.  Handles all Ganga status
	conditions, and in the case of those that indicate job complete,
	retrieve output and remove Ganga job.  Next step is to analyse results
	and prepare job for retry if appropriate.

2007-11-05 23:42  ahimmel

	* NuMuBar/NuPlots.cxx:



	Update FillCounts to allow for different samples and updated FillBRev to
	separate the exiting sample into Upstream, Donwstream Side and End.

2007-11-05 22:38  nwest

	* GridTools/Ganga/GBS/python/: GBSTaskManager.py, GBSTaskMaster.py:

	Use revised GBSObject.GetStoreLocation call sequence.

2007-11-05 22:38  nwest

	* GridTools/Ganga/GBS/python/GBSObject.py:

	Improve method GetStoreLocation which can return parent directory,
	child directory or own state.

2007-11-05 22:38  nwest

	* GridTools/Ganga/GBS/python/: GBSLogger.py, bootstrap.py:

	Add SetLoggerThreshold method so user can change level.

2007-11-05 22:38  nwest

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Use GBSIdCodes.

	Move Ganga job creation on.  Still work in progress but at least the
	sandboxes, wrapper script, user application script with arguments and
	log file are being configured now.

2007-11-05 22:38  nwest

	* GridTools/Ganga/GBS/python/GBSIdCodes.py:

	Start a file in which to record mnemonics to codes rather use numbers in the code.

2007-11-05 22:02  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h, NCType.h,
	  Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationJK_fit.cxx,
	  Extrapolation/NCExtrapolationModule.cxx,
	  Extrapolation/NCExtrapolationModule.h,
	  macros/nearFarExtrapolationMC.C:

	fix up axis labels for new 1D plots.

	finish change of P to W in fLocPE-->fLocWE etc.

	add in ability to select oscillation model to test from macro and include
	comments in macro to explain the mapping of the variables from 4 flavor to
	3 flavor cases.

	make sure to only try to make contours if fitting both parameters for
	the contour.

2007-11-05 21:49  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Fix compiler warnings.

2007-11-05 21:46  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Decide what projections to make based on the contours requested.

2007-11-05 21:26  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Work out the number of bins correctly (round to nearest int, instead of towards zero).

2007-11-05 21:20  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Don't create pointless canvases. Don't write out the plots twice.

2007-11-05 21:08  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Fix calculation of position on axis.

2007-11-05 20:19  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Put the projections in canvases.

2007-11-05 19:40  musser

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	remove diagnostic couts

2007-11-05 19:02  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Make 1D projections of the chisq surface onto all parameters of the fit.

2007-11-05 18:43  bspeak

	* OnlineEventDisplay/OnlineEventDisplay.cxx:

	Plug a slow memory leak in the creation of a few TPolyLine objects.

2007-11-05 18:04  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/nearFarExtrapolationMC.C:

	default the isdata parameter to be mc instead of data as this is a macro
	to run over mc

2007-11-05 17:45  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_far_spill_cedar_phy.C:

	Typo.

2007-11-05 17:36  nwest

	* GridTools/Ganga/GBS/python/gbs_test_application_script.sh:

	Have a dummy application script for GBS to run

2007-11-05 17:30  nwest

	* GridTools/Ganga/GBS/docs/gbs_design.html:

	Revise environment provided to application script

2007-11-05 16:16  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/concatenate_contours.C:

	macro to concatenate contours from multiple files into one.

2007-11-05 16:15  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	set max value for w_e to 1. just to make the contours look ok.

2007-11-05 15:28  bckhouse

	* Production/Cedar_phy/restructure-chris/reco_far_all_cedar_phy.C:

	Fix misnamed output file.

2007-11-05 15:25  danche

	* Contrib/pidtf/PanMaker/: MadMCTuftsID.cxx, MadMCTuftsID.h,
	  PanMaker.cxx, PanMaker.h, PanObjects.cxx, PanObjects.h,
	  example.C:

	Updated MadMCTuftsID to include new varaibles (NC-like track extension, track/shower overlap)
	and fix a couple of bugs (track strip energy, etc). Updated PanMaker, PanOjects to include
	updates from MadMCTuftsID. Added files for processing to example.C

2007-11-05 15:23  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/: ncccSeparationNC.C, nearFarExtrapolationMC.C:

	commit the changes for the use of parke model variables in macros as well.

2007-11-05 15:03  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Short term hack for RAL T1 where dccp is no longer in the path on the back-end

2007-11-05 14:55  nwest

	* GridTools/Ganga/GBS/: docs/gbs_programmer.html,
	  python/GBSJobManager.py, python/GBSObject.py,
	  python/GBSTaskManager.py, python/GBSTaskMaster.py:

	Cosmetic change: indent comments so that doxygen doesn't skip material in Class Reference page

2007-11-05 11:40  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat:

	Fix up wildcarding on Application:CedarDaikon04

2007-11-05 11:30  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_daikon_scripts.sh:

	Update for daikon_04

2007-11-05 11:26  nwest

	* GridTools/docs/jobs_tutorial.html:

	Explain that voms-proxy-init w/o -voms gives old style GRID certificate.

2007-11-05 02:43  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/vld/CosmicLE/ValidationLog:


	Further comment regarding the differences between geant321 as used in
	gminos and geant321 as used in geant3_vmc.

2007-11-04 22:08  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Add test code to submit a Ganga job

2007-11-04 22:07  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskManager.py:

	Fix misspelling of data member

2007-11-04 22:06  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_programmer.html:

	Rename __reload_children() to __ReloadChildren()

2007-11-04 22:05  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/gbs_job_wrapper.sh:

	Begin work on job wrapper for worker node

2007-11-04 19:15  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/macro/PTSim_GUI.C:


	Invoke LoadMinosPDG up front to make sure that we have all particles defined

2007-11-04 19:03  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/TGeant3/: TGeant3.cxx, TGeant3.h:


	Modify TGeant3::SetCUTS argument Float_t *gcuts to have default value 0
	for backward compatibility of the method.  gcuts was introduced with
	geant3_vmc version 1-8 to allow 5 user definable cuts a la Geant3.
	Method implementation updated to check for null gcuts ptr before use.

2007-11-04 18:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/: GBSJobManager.py, GBSObject.py,
	  GBSTaskManager.py, GBSTaskMaster.py:

	Move storing of model down into GBSObject, where it should have been from the start

2007-11-04 18:02  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskMaster.py:

	Cosmetic changes:-

	  Improve __doc__.
	  Rename __reload_children to __ReloadChildren

2007-11-04 18:02  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskManager.py:

	Improve __doc__.

	Can now add, list and access JobManagers through new methods:-

	  GetJobManager(name)
	  ListJobManagers()
	  AddJobManager()
	  __AddNamedJobManager(name)
	  __ReloadChildren()

2007-11-04 18:02  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSObject.py:

	When logging creation, don"t print object in full, just type and name.

2007-11-04 18:02  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSJobManager.py:

	Cosmetic change to__repr__() method.

2007-11-04 17:52  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: README_gcalor, README_geane, README_geane_more:


	Update to geant3_vmc version 1-8.  New README files.

2007-11-04 16:37  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/: GBSJobManager.py,
	  register_models.py:

	Create brain dead GBSJobManager

2007-11-04 14:11  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSObject.py:

	Adhere to coding convention

2007-11-04 13:00  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskManager.py:

	Adhere to coding convention

2007-11-04 12:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/: bootstrap.py, register_models.py:

	Respond to new standard ctor arg list.

2007-11-04 12:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskMaster.py:

	Adhere to the (now) standardised coding convention for role playing
	classes.

	The state __taskManagers and __taskManagersModels is now volatile (not written)
	and is instead reloaded by the new method: __reload_children().

	Respond to new standard ctor arg list.

2007-11-04 12:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSTaskManager.py:

	Respond to new standard ctor arg list.

	Add methods

	  GetScriptFileName(self)
	  SetScriptFileName(self,ext_file_spec)
	  SetScriptFileName(self,ext_file_spec)

	Add state

	  __script_file_name
	  external script file (not held in .state file).

2007-11-04 12:46  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSObject.py:

	Change from defining __str__(self) to __repr__(self) so that user
	can examine more easily.

	Add method MakeChildDirectory(self)

	When reporting I/O to GBSLogger only report GBSObject.__repr__(self)
	so that only a single line is written.

2007-11-04 12:46  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSModelRegistry.py:

	CreateObject method: Simplify calling sequence; pass in object ctors
	args as part of the sequence instead of an embedded list.

	Respond to GBSModel.CreateObject method arg change.

2007-11-04 12:46  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/GBSModel.py:

	CreateObject method: Simplify calling sequence; pass in object ctors
	args as part of the sequence instead of an embedded list.

	Passed model-specific dictionary to objects ctor.

2007-11-04 11:09  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs_programmer.html:

	Provide some rules for laying out role playing classes

2007-11-04 10:02  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/python/.cvsignore:

	Put stuff I will probably never need into obsolete

2007-11-04 09:59  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/: gbs.html, gbs_design.html,
	  gbs_index.html, gbs_programmer.html, gbs_user.html:

	Restructure into Design, Programmer and User Manuals (shame there's not code)

2007-11-04 09:56  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs.doxygen:

	Don't hardwire source directory; make it relative

2007-11-04 09:04  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Ganga/GBS/docs/gbs.html:

	Explain how objects are customised within models (so that I can remember it)

2007-11-03 09:45  nwest

	* GridTools/Ganga/GBS/: docs/gbs.html, python/.gbsrc,
	  python/GBSConfig.py:

	Improve configuration support, with internal and external config files

2007-11-03 09:44  nwest

	* GridTools/Ganga/GBS/docs/: .cvsignore, gbs.doxygen,
	  run_doxygen.sh:

	Add doxygen html code generation (with hardwired doxygen binary)

2007-11-02 21:14  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/TGeant3/: G3Node.cxx, TGeant3.cxx, TGeant3.h,
	  TGeant3TGeo.cxx, TGeant3gu.cxx, geant3LinkDef.h:


	Upgrade to geant3_vmc version1-8:
	1)Changes to support GEANE update.
	2)TGeant3::SetCUTS now allows user defined cuts
	3)New methods TGeant3::SetECut,SetClose,InitGEANE to be used with GEANE
	4)New method TGeant3::MediumId(const Text_t *name) to retrieve id by name
	5)TGeant3TGeo.cxx  Add call to TVirtualMCApplication::MisalignGeometry. To
	be implemented by user application in case misalignment needs to be applied
	to TGeo after ideal geometry was built.

2007-11-02 20:14  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gtrak/: ghelix.F, ghelx3.F, grkuta.F:


	Upgrade to geant3_vmc version 1-8:
	  Change speed of light to agree with current PDG value.

2007-11-02 20:11  mualem

	* Contrib/rhatcher/gminos_jobs/run_cit.sh:

	changed so that something useful might actual get printed after
	a core dump.

2007-11-02 20:06  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCOscProb.cxx, NCOscProb.h, NCType.h,
	  Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationDP.cxx,
	  Extrapolation/NCExtrapolationJK.cxx,
	  Extrapolation/NCExtrapolationJK_fit.cxx,
	  Extrapolation/NCExtrapolationMQ.cxx,
	  Extrapolation/NCExtrapolationModule.cxx,
	  Extrapolation/NCExtrapolationModule.h,
	  Extrapolation/NCExtrapolationNS.cxx,
	  Extrapolation/NCExtrapolationRS.cxx,
	  NumRec/MinosMinimization.cxx, NumRec/MinosMinimization.h,
	  macros/nearFarExtrapolation.C, macros/nearFarExtrapolationMC.C:


	make code complient with parke model nomenclature

2007-11-02 19:33  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gphys/: grayl.F, gvaviv.F:


	Upgrade to geant3_vmc version 1-8:
	  grayl.F: Protect against | COSTH | > 1.
	  gvaviv.F: Avoid use of non-initialized data.

2007-11-02 19:20  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/geant321/: gccuts.inc, gcmore.inc, gtcuts.inc,
	  gtmore.inc:


	Upgrade to geant3_vmc version 1-8:
	Changes to support GEANE update.

2007-11-02 18:45  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/examples/: alain.F, alain.dat, barrel-final_1_9.euclid,
	  bind_alain, bind_alaina, bind_alaina3, bind_gexam1, bind_gexam1a,
	  bind_gexam4, bind_gexam4a, bind_model, gphysi.dat, tarE01:


	Upgrade to geant3_vmc version 1-8

2007-11-02 18:39  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/erdecks/: erland.F, ermcsc.F, ertrch.F, eustep.F:


	Upgrade to geant3_vmc version 1-8.
	This includes a "major update" of GEANE.  See header comments in modified
	routines.

2007-11-02 18:31  boehm

	* MuonRemoval/: GenerateElec/makeAscii/elecFromMergedMRCC.C,
	  macros/run_mre_DATA_near_cand_cedar_phy.C,
	  macros/run_mre_MC_near_cand_cedar.C:

	Adding in three new macros for dealing with modern MRE generation

	elecFromMergedMRCC - handles the fact that we now have concatenated ntuples,
	but mre generation needs to eventually merge the files with candidate files.
	As such this script breaks apart the output into the separate subruns

	run_mre - updates to the reconstruction scripts to work in cedarPhy data
	and cedar Daikon

2007-11-02 18:28  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/config/: Makefile.linuxia64gcc, Makefile.linuxx8664gcc,
	  version_number:


	Upgrade to geant3_vmc version 1-8:
	  Makefile.linuxia64gcc: Add flag -fno-f2c to FOPT
	  Makefile.linuxx8664gcc: Add flag -fno-f2c to FOPT
	  version_number: 1.8

2007-11-02 18:22  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/comad/gcomad.F:


	Upgrade to geant3_vmc version 1-8:
	New GEANE configuration parameter GCALPHA.  Used to specify energy cut
	parameter for energy loss fluctuations.

2007-11-02 18:18  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/set_msg_levels_far_all_mc.h:

	Another missing file.

2007-11-02 18:16  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/far_all/:
	  far_all_configure.h, far_all_configure_filters.h,
	  far_all_create_path.h:

	Add entire directory that somehow never got committed.

2007-11-02 18:05  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_far_spill_cedar_phy.C, headers/io/attach_output.h:

	Use correct path name.

2007-11-02 17:53  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCOscProb.cxx:

	make sure to take sqrt in sterile probability equation

2007-11-02 17:44  arms

	* Contrib/rhatcher/gminos_jobs/umn_copy_flux.sh:

	Make the umn flux copy script a little smarter in figuring out if flux files need to be copied to a particular node

2007-11-02 17:41  nwest

	* GridTools/docs/data_tutorial.html:

	Mention dccp in dCache section.

2007-11-02 17:41  nwest

	* GridTools/docs/data_dcache.html:

	Remove historical note about ROOT 5.11/06.

2007-11-02 17:41  nwest

	* GridTools/docs/data_castor.html:

	Add waring: broken at RAL.

2007-11-02 17:41  nwest

	* GridTools/docs/ChangeLog:

	More on running loon.  RSD Current neugen3 version is v3_5_4

2007-11-02 17:41  nwest

	* GridTools/Scripts/: docs/Scripts.html, jobs/demo_loon_job.sh,
	  jobs/demo_loon_job_nfs.jdl, jobs/demo_loon_job_nfs.sh,
	  jobs/demo_loon_job_se.sh:

	Add a second, less demanding, example of running loon using NFS disk
	and without Ganga.

2007-11-02 17:41  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat:

	Current neugen3 version is v3_5_4

2007-11-02 17:41  nwest

	* GridTools/: DataCacheManager/init.pm,
	  DataCacheManager/docs/dcm.html,
	  RemoteSoftwareDeployment/doc/rsd.html,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  Scripts/maintenance/version_number:

	Update to version no V00-07-44

2007-11-02 17:07  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_MC_daikon_near_cosmic_cedar_phy.C:

	Fix output filename.

2007-11-02 16:52  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/reco_MC_daikon_near_cedar_phy.C:

	Fix name of output candidate file.

2007-11-02 15:53  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Fix verbose output typo.

2007-11-02 15:45  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Switch the direction the contour is traced in.
	This shouldn't make any difference but will be interesting to see for current debugging.

2007-11-02 08:54  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Change name of internal variable 'setup_script' to someting less likely to conflict with caller's shell variables

2007-11-02 04:58  Minos CVS group account.  Do not commit from here!

	* Contrib/rhatcher/gminos_jobs/submit_cit_blades.sh:

	separate file for running simulations on blade portion
	of the caltech farm

2007-11-02 04:46  Minos CVS group account.  Do not commit from here!

	* Contrib/rhatcher/gminos_jobs/submit_cit.sh:

	latest working version

2007-11-02 04:39  Minos CVS group account.  Do not commit from here!

	* Contrib/rhatcher/gminos_jobs/run_cit.sh:

	Many modification, using new version number in setup bundle,
	added a line to record which machine it ran on for tracking,
	commented on the log file checks, automatically uses the
	correct number of checks for cosmic and neutrino files.

2007-11-02 04:34  Minos CVS group account.  Do not commit from here!

	* Contrib/rhatcher/gminos_jobs/setup_cit_bundle.sh:

	modified to use new flux file location

2007-11-02 04:31  Minos CVS group account.  Do not commit from here!

	* Contrib/rhatcher/gminos_jobs/cit_bulk_copy.sh:

	modified to figure out the proper destinations automatically.

2007-11-01 23:22  rustem

	* PhysicsNtuple/: TrueNu.cxx, TrueNu.h:



	Reverse hasty changes to TrueNu.

2007-11-01 22:33  rustem

	* PhysicsNtuple/: TrueNu.cxx, TrueNu.h:



	Trim down TrueNu class by few int size variables.

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/primer.html:

	Add Grid Scripts to the beginners reading list.

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/glossary.html:

	In UI remove section about glite and last year"s unification of
	front-ends with UIs

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/data_castor.html:

	Add section explaining Account, Group and User names seen in Castor
	file listing.

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/admin_user.html:

	Remove "Under Construction" notice.

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/admin_procedures.html:

	Remove paragraph about last year"s CA transition.

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/: admin_install_software.html,
	  environmental_variables.html, sites.html:

	Switch new VO name.

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/Scripts/docs/Scripts.html:

	Bring documentation up to date with new setup scripts and new VO.
	Describe the executables the setup scripts make available.
	Remove section of software tags for now. (our s/w isn"t on the CE)

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat:

	Switch to new CedarDaikon name CedarDaikon04 and require daikon_scripts:071012

2007-11-01 22:28  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/: Ganga/GangaMinos.ini, Ganga/docs/ganga.html,
	  Scripts/jobs/demo_loon_job.sh:

	Switch to CEs that support minos.vo.gridpp.ac.uk

2007-11-01 20:48  hartnell

	* NtupleUtils/doc/NuDST.html:


	updated

2007-11-01 20:03  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	make it possible to fix w_e in the fitting

2007-11-01 19:40  rustem

	* PhysicsNtuple/Select/SelectFlux.h:



	Add stuff.

2007-11-01 19:35  rustem

	* PhysicsNtuple/: LocalFit.cxx, Select/SelectFlux.h:



	Add #include <cassert>

2007-11-01 19:28  rustem

	* PhysicsNtuple/: Hist1d.h, LocalFit.cxx, LocalFit.h:



	Add configuration functions to LocalFit, fix few minor bugs in Hist1d<T>.

2007-11-01 19:11  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/set_calibrator.h:

	Recreate accidentally deleted file.

2007-11-01 19:03  bckhouse

	* Production/Cedar_phy/restructure-chris/: reco_MC_far_cedar_phy.C,
	  reco_MC_near_cedar_phy.C, headers/set_calibrator.h:

	Remove pre-daikon MC scripts

2007-11-01 18:32  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_MC_far_cedar_phy.C,
	  reco_MC_near_cedar_phy.C,
	  MRCC/reco_MC_daikon_far_MRCC_cedar_phy.C,
	  MRCC/reco_MC_daikon_near_MRCC_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  MRCC/srsafitter/reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Use correct GeVPerMip numbers everywhere:

	Near Detector: 0.001792
	Far Detector: 0.001786

	According to minos-doc-3322

2007-11-01 17:46  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/srsafitter/:
	  reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	MRCC_srsafitter ACLiC

2007-11-01 17:41  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/:
	  reco_MC_daikon_far_MRCC_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_cedar_phy.C,
	  reco_far_all_MRCC_cedar_phy.C, reco_far_spill_MRCC_cedar_phy.C,
	  reco_near_cosmic_MRCC_cedar_phy.C,
	  reco_near_spill_MRCC_cedar_phy.C:

	MRCC scripts now work with ACLiC.

2007-11-01 17:39  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/:
	  attach_mrcc_path.h, util/get_record_title.h,
	  util/set_ntpst_output_bntp.h:

	Correct fix: add include guards.

2007-11-01 17:32  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/attach_mrcc_path.h:

	Remove superfluous #include

2007-11-01 17:26  bckhouse

	* Production/Cedar_phy/restructure-chris/srsafitter/:
	  reco_MC_daikon_far_cedar_phy_srsafitter.C,
	  reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C,
	  reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C,
	  reco_far_all_cedar_phy_srsafitter.C,
	  reco_far_spill_cedar_phy_srsafitter.C,
	  reco_near_cosmic_cedar_phy_srsafitter.C,
	  reco_near_spill_cedar_phy_srsafitter.C:

	ACLiCification of the srsafitter scripts.

2007-11-01 17:26  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/io/:
	  attach_blinded_output.h, attach_output_mc_srsafitter.h,
	  attach_output_srsafitter.h:

	Make function signatures more consistent.

2007-11-01 17:04  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_far_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_MC_far_cedar_phy.C,
	  reco_MC_near_cedar_phy.C, reco_far_all_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, reco_near_cosmic_cedar_phy.C,
	  reco_near_spill_cedar_phy.C:

	Fix small problems - scripts now compile with ACLiC.

2007-11-01 17:04  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/aclic.h:

	Include for some files to allow the scripts to build with ACLiC

2007-11-01 16:55  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/set_sm2_bfield.h:

	Remove unused variable.

2007-11-01 16:38  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/spill/spill_create_path.h:

	Remove testing code committed by accident.

2007-11-01 16:13  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/srsafitter/:
	  reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  reco_near_cosmic_MRCC_srsafitter_cedar_phy.C:

	Add nSkip and nRun to MRCC_srsafitter scripts.

2007-11-01 16:11  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/:
	  reco_far_all_MRCC_cedar_phy.C, reco_far_spill_MRCC_cedar_phy.C,
	  reco_near_cosmic_MRCC_cedar_phy.C,
	  reco_near_spill_MRCC_cedar_phy.C:

	Add nSkip and nRun to MRCC scripts.

2007-11-01 16:09  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_far_spill_cedar_phy_srsafitter.C:

	Add nSkip and nRun.

2007-11-01 16:08  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cosmic_cedar_phy.C, reco_MC_far_cedar_phy.C,
	  reco_MC_near_cedar_phy.C, reco_far_all_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, reco_near_cosmic_cedar_phy.C,
	  reco_near_spill_cedar_phy.C:

	Make sure all the base scripts have nSkip and nRun

2007-11-01 15:54  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Add cacheing at the contour level (ie in integer coordinates). This should be more robust, and possibly reduce overhead.

	Will likely change the symptoms of, but not fix, the problems with contours when the chi^2 function returns inconsistent results.

2007-11-01 15:45  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/srsafitter/:
	  reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_far_MRCC_srsafitter_cosmic_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  reco_far_spill_MRCC_srsafitter_cedar_phy.C,
	  reco_near_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	MRCC_srsafitter scripts.

2007-11-01 15:33  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Fix reco_MC redirect

2007-11-01 15:27  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C:

	More #include fixes

2007-11-01 15:24  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C:

	Fix up #includes

2007-11-01 09:50  nwest

	* GridTools/Ganga/docs/ganga.html:

	Explain how to fix the 'No module named subprocess' problem

2007-11-01 09:18  rodriges

	* Contrib/pidtf/README:

	Update README to reflect DataMCPlots

2007-11-01 06:23  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/: setup_subbundle.csh,
	  setup_subbundle.sh:

	Daikon_04 should be setup against neugen3 3_5_*4* now.

2007-11-01 06:21  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/gminos_jobs/: setup_fnal_bundle.csh,
	  setup_fnal_bundle.sh:

	Tweak FNAL setup so that some env variables needed by *build* process
	don't accidentally get left pointing at "development".  This shouldn't
	be necessary for simple users of the bundles.

2007-10-31 21:21  boehm

	* NueAna/Extrapolation/Comparator.cxx:

	Removing Chris's implicit 6 GeV cut and making a copy instead of modifying the actual histogram in one use case

2007-10-31 21:19  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCOscProb.cxx:

	new protection for sqrt(<0) in oscillation probabilities

2007-10-31 21:18  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	remove old protection for sqrt(<0) and update names for axes and
	output canvases/graphs to reflect variables in parke model

2007-10-31 21:02  boehm

	* NueAna/: ANtpEventInfoNue.h, BeamMon.cxx, BeamMon.h,
	  NueStandard.cxx, Module/NueBeamMonModule.cxx:

	Minor tweak to ANtpEventInfoNue because apparently there is a way to make a variable not written out to the root file and I accidentally stumbled across it

	Added a new variable goodDataQual to the beam monitoring block which will store NueStandard::PassesDataQuality on the tree

	Also change pot counting to just use the NueStandard DataQuality function to ensure consistency.

2007-10-31 20:40  rustem

	* PhysicsNtuple/: FitPoint.cxx, FitPoint.h, LocalFit.cxx,
	  LocalFit.h:



	Implementation of robust locally weighted regression algorithm:

	Cleveland, W.S., 1979, Journal of the American Statistical Association, 74, 829

	This is a almost unbiased local regression method that allows nonparametric data
	estimation with a significant reduction of the statistical fluctuations in the fitted
	data.

2007-10-31 20:36  rustem

	* PhysicsNtuple/: TrueNu.cxx, TrueNu.h:



	A new data class TrueNu. This is a lightweight copy of Truth class, stores just enough
	truth information to run a fit for the near detector or unfold the near detector spectrum.
	It allows factor of 3 reduction of file size used in the fit and unfolding.

2007-10-31 20:33  rustem

	* PhysicsNtuple/: AlgAdapt.h, Default.cxx, LinkDef.h,
	  RunAlgEvent.cxx, Truth.cxx, Truth.h, Vertex.cxx, Vertex.h,
	  Config/FiducialCut.txt, Config/FiducialCutR080.txt,
	  Config/PlotVtx.xml, Hist/HistMan.h, Plot/PlotVtx.cxx,
	  Plot/PlotVtx.h, Select/FiducialCut.cxx, Select/FiducialCut.h,
	  Select/SelectFiducial.cxx, Select/SelectFiducial.h,
	  Select/SelectFlux.cxx, Select/SelectNeutrino.cxx:



	A development snapshot:

	1) Significant upgrade to SelectFiducial algorithm: allow passing of all
	reconstructed and true objects with fiducial flag set, improve reading of the
	configuration file for FiducialCut.

	2) Modify AlgAdapt and SelectFlux to use new class TrueNu.

	3) HistMan by defaults now creates TH1D instead of TH1F

2007-10-31 19:16  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C:

	reco_MC_daikon_far_cosmic_cedar_phy_srsafitter.C

2007-10-31 19:12  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C

2007-10-31 19:02  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Set AlgConfig to NearCosmic

2007-10-31 18:47  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C:

	Fix #include

2007-10-31 18:46  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/io/attach_output_mc_srsafitter.h:

	Add SAFitter to record title.

2007-10-31 18:45  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_MC_daikon_far_cedar_phy_srsafitter.C:

	reco_MC_daikon_far_cedar_phy_srsafitter.C

2007-10-31 18:31  bckhouse

	* Production/Cedar_phy/restructure-chris/MRCC/:
	  reco_MC_daikon_far_MRCC_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_cedar_phy.C:

	more MRCC scripts.

2007-10-31 18:19  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/MRCC/reco_far_all_MRCC_cedar_phy.C:

	reco_far_all_MRCC_cedar_phy.C

2007-10-31 18:09  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/MRCC/reco_near_cosmic_MRCC_cedar_phy.C:

	reco_near_cosmic_MRCC_cedar_phy.C

2007-10-31 18:03  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/MRCC/reco_far_spill_MRCC_cedar_phy.C:

	reco_far_spill_MRCC_cedar_phy.C

2007-10-31 17:28  scavan

	* NueAna/NueAnaTools/: NueConvention.cxx, NueConvention.h:

	Added two functions for computing NueEnergyCorrection.

	This function should be called at the start of analysis for every NueRecord to make sure that the energy calibration is up to date.

	//for converting a meu value to gev
	float energy_in_gev NueConvention::NueEnergyCorrection(float energy_in_meu);

	//for updating srevent.gev, srshower.gev, and srtrack.gev
	//from srevent.meu, srshower.meu, and srtrack.meu in a given NueRecord
	void NueConvention::NueEnergyCorrection(NueRecord *r);

2007-10-31 17:24  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Include SAFitter in the RecordTitle

2007-10-31 17:01  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Remember the word cosmic in the function name and various other places.

2007-10-31 16:56  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	New attempt at near MC cosmics srsafitter script.

2007-10-31 16:26  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_far_spill_cedar_phy_srsafitter.C:

	reco_far_spill_cedar_phy_srsafitter.C

2007-10-31 15:51  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_near_cosmic_cedar_phy_srsafitter.C:

	reco_near_cosmic_cedar_phy_srsafitter.C

2007-10-31 15:51  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/io/attach_output_srsafitter.h:

	Add switches to match non srsa version.

2007-10-31 15:30  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Fix double declaration of JobC

2007-10-31 15:01  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  reco_far_all_cedar_phy_srsafitter.C,
	  reco_near_spill_cedar_phy_srsafitter.C,
	  srsafitter/reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  srsafitter/reco_far_all_cedar_phy_srsafitter.C,
	  srsafitter/reco_near_spill_cedar_phy_srsafitter.C:

	Move srsafitter scripts to their own directory for consistency with existing structure.

2007-10-31 14:56  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/MRCC/reco_near_spill_MRCC_cedar_phy.C:

	Rewrite #includes for new directory structure.

2007-10-31 14:55  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_near_spill_MRCC_cedar_phy.C,
	  MRCC/reco_near_spill_MRCC_cedar_phy.C,
	  headers/spill/spill_create_path.h:

	Move MRCC scripts to their own directory for consistency with existing scripts.

	Plus miscellaneous changes that never got committed.

2007-10-31 14:36  bckhouse

	*
	  Production/Cedar_phy/srsafitter/reco_MC_daikon_near_cosmic_cedar_phy_srsafitter.C:

	Add previously non-existent near cosmic MC srsa script.

2007-10-31 11:16  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/: admin_install_software.html,
	  environmental_variables.html, fixed_problems.html,
	  glue_schema.html, jobs_globus.html, jobs_tutorial.html,
	  sites.html, status_lcg-ManageVOTag.html, status_ldapsearch.html:

	Global rename lcgce01->lcgce02, our new CE at RAL T1

2007-10-31 11:14  nwest

	* GridTools/docs/links.html:

	Add RAL Tier1 Grid Team Actions

2007-10-31 11:14  nwest

	* GridTools/docs/status_minos.html:

	Cannot install s/w on the GRID - the disk /stage/sl3-lcg-exp is full!

2007-10-30 23:06  boehm

	* NueAna/: ANtpEventInfoAna.cxx, ANtpEventInfoNue.cxx,
	  ANtpEventInfoNue.h, AnalysisInfoAna.cxx, NueStandard.cxx,
	  Module/NueModule.cxx:

	Adding in some additional flags to track the coil information also extending NueStandard to handle it correctly and cleaning up a warning message in analysisinfoana

2007-10-30 19:32  danche

	* Contrib/pidtf/: MCTuftsID/MadMCTuftsID.cxx,
	  MCTuftsID/MadPIDAnalysisTUFTS.cxx,
	  MCTuftsID/MadPIDAnalysisTUFTS.h, PanMaker/LinkDef.h,
	  PanMaker/MadMCTuftsID.cxx, PanMaker/MadMCTuftsID.h,
	  PanMaker/PanMaker.cxx, PanMaker/PanMaker.h,
	  PanMaker/PanObjects.cxx, PanMaker/PanObjects.h:


	Creates variables and PID for identifacation of short (<14 planes) muon tracks

2007-10-30 16:46  nwest

	* GridTools/: RemoteSoftwareDeployment/config/example.config,
	  RemoteSoftwareDeployment/config/minos-oxford_t2_ui.config,
	  RemoteSoftwareDeployment/config/minos-ral_t1_ui.config,
	  RemoteSoftwareDeployment/config/minos-ral_t1_wn.config,
	  RemoteSoftwareDeployment/config/minos-ral_t2_wn.config,
	  RemoteSoftwareDeployment/driver/cmd_launch.pm,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  RemoteSoftwareDeployment/driver/job_make_jdl_file.pm,
	  RemoteSoftwareDeployment/driver/parse_command.pm,
	  RemoteSoftwareDeployment/driver/replace_sw_tag.pm,
	  RemoteSoftwareDeployment/driver/set_local_config.pm,
	  docs/ChangeLog:

	Define VO_NAME as distinct from the EXPT name for those poor
	experiments that are saddle with having them different i.e. MINOS and
	use the VO name for GRID operations i.e. determining top software
	directory, software tags and job submission.

2007-10-30 16:38  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Add kVerbose debug output to contour finder.

2007-10-30 16:25  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Don't report failure to setup Ganga

2007-10-30 14:59  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/nearFarExtrapolationMC.C:

	put a string in for the contour name so i dont have to look up the # all the
	time

2007-10-30 14:18  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:


	make sure to use the preset value of phi_43 in the fits if it exists and
	is not being fit for

2007-10-30 11:27  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Plot dmsq axes in units of 1e-3 eV^2

2007-10-30 11:12  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_sam_web_client.sh:

	When preparing setup script add check to see if PYTHONPATH appears to
	already have been updated and skip if so.  This to ensure repeated
	invocations don't end up with a very long path.

2007-10-30 11:09  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_minossoft.sh:

	When preparing srt_envrc define SRT_CXX.

	When preparing setup_minossoft.* scripts hardwire SRT_BASE_RELEASE so
	that users can switch between different stacks with different versions
	without having to specify release.

2007-10-30 08:19  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Add --silent option

2007-10-29 21:59  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.csh:

	If SRT_DIST defined, set up alias for srt_setup

2007-10-29 21:40  danche

	* Contrib/pidtf/MCTuftsID/: CCPID_exampleTUFTS.C,
	  CCPID_exampleTUFTS.C~, MadMCTuftsID.cxx, MadMCTuftsID.cxx~,
	  MadMCTuftsID.h, MadMCTuftsID.h~, MadPIDAnalysisTUFTS.cxx,
	  MadPIDAnalysisTUFTS.cxx~, MadPIDAnalysisTUFTS.h,
	  MadPIDAnalysisTUFTS.h~:

	MadMCTuftsID is a class that calculates and records variabels useful in finding short (<15 planes) muon tracks, for use in the Mad framework.
	The other (*TUFTS*) files are versions of the * files which have been edited to include the MadMCTufts class.

2007-10-29 19:39  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Switch to new home for RSD installed code at Oxford

2007-10-29 18:30  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  macros/nearFarExtrapolationMC.C:


	make sure to only draw specified contours in all of the different methods,
	not just the hybrid one.

	fix up the macro to take phase as an argument.

2007-10-29 18:23  rodriges

	* Contrib/pidtf/DataMCPlots/: mypainter.cxx, mypainter.h:

	Should have committed this with the other files

2007-10-29 18:20  rodriges

	* Contrib/pidtf/DataMCPlots/: HistMaker.cxx, HistMaker.h, README,
	  RecoVar.cxx, RecoVar.h, runDataMC.C, wrapper.C:

	Initial import of some data/MC comparison code. It's mostly there, just needs the
	actual variables added, and a way to do SKZP weighting (if we decide to do that)

2007-10-29 17:01  arms

	* Contrib/rhatcher/gminos_jobs/: run_umn.sh, umn_copy_flux.sh:

	Update local scripts for FD beam running

2007-10-29 16:50  nwest

	* GridTools/docs/ChangeLog:

	More work on setup scripts.

2007-10-29 16:50  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Modify list of directories to try looking for top level directory:-
	  Remove $SRT_DIST and /data/minos/west/rsd_test
	  Add    /data/minos/west/rsd (where Oxford SL4 installed)

	Look for any version of Ganga to set up, instead of hardwiring.
	Check for Oxford Ganga install.

	If either of SamWebClient or Subversion installed source their setup
	files.

2007-10-29 16:50  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.csh:

	If Subversion has been installed source its setup file.

2007-10-29 16:50  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_subversion.sh:

	Fix bug in the setup script that creates bash routine "svn".

2007-10-29 16:50  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_GridTools.sh:

	Rework the top level setup scripts set up.  Instead of making copies
	of the setup_minos_lcg_grid.* scripts create site-specific ones that
	simply source the installed ones.

2007-10-29 16:50  nwest

	* GridTools/: DataCacheManager/init.pm,
	  DataCacheManager/docs/dcm.html,
	  RemoteSoftwareDeployment/doc/rsd.html,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  Scripts/maintenance/version_number:

	Update to version V00-07-43

2007-10-29 16:49  nwest

	*
	  GridTools/DataCacheManager/config/minos.site_ral_t1_ui.local_disks:

	Exclude s/w directory tree and DCM cache.

2007-10-29 15:31  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/util/get_record_title.h:

	Work around CINT's apparently broken implementation of default arguments.

2007-10-29 15:14  kordosky

	* Contrib/rhatcher/gminos_jobs/ral_bulk_copy.sh:

	new script to do bulk copies of archived jobs from ral. this version allows for multiple simultaneous copies.

2007-10-29 15:05  bckhouse

	*
	  Production/Cedar_phy/restructure-chris/headers/util/get_record_title.h:

	Handle case of unspecified release correctly.

2007-10-29 15:00  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/vld/CosmicLE/ValidationLog:


	Update with latest information.

2007-10-29 11:56  evans

	* NtupleUtils/: NuCuts.cxx, NuCuts.h:

	Adding an FD NuMuBar fiducial cut function: the CC0250 cut plus a 40 cm
	coil hole cut.

2007-10-28 23:44  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	fix where the axes get filled

2007-10-28 17:34  koskinen

	* NCUtils/Extrapolation/NCExtrapolation.cxx:


	Updating the NCUtils package to produce only specified contours had a bug
	where only the xaxes vector was getting filled properly, while the
	yaxes vector for the contours was staying at the max allowed. So the
	previous version

	  if(fUseWEWMuContour){
	    fXAxes.push_back(fLocPE);             fYAxes.push_back(fLocPMu);

	was changed to

	  if(fUseWEWMuContour){
	    fXAxes.push_back(fLocPE);
	    fYAxes.push_back(fLocPMu);
	  }

2007-10-27 06:14  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecMinos.cxx, RecMinos.h, RecRecordImp.cxx,
	  RecRecordImp.h:


	Remove RecJobHistory data member from record base classes until the
	addition is given time for review.

2007-10-27 06:05  Sue Kasahara <schubert@hep.umn.edu>

	* PhotonTransport/PhotonTransport.cxx:


	Comment out change to fill in PhotonTransport/DetSim job history in
	SimSnarlRecord.  Since this scheme differs from that discussed in the
	last sw meeting, should give it time for review first.

2007-10-27 06:02  Sue Kasahara <schubert@hep.umn.edu>

	* RerootExodus/RerootToTruthModule.cxx:


	Comment out change to fill JobRecHistory with GMinos history in SimSnarlRecord.
	Since this scheme differs from that discussed in the last sw meeting,
	should give it time for review first.

2007-10-27 06:00  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/PTSimModule.cxx:


	Comment out change to fill JobRecHistory in SimSnarlRecord.  Since
	this scheme differs from that discussed in the last sw meeting,
	should give it time for review first.

2007-10-27 05:57  Sue Kasahara <schubert@hep.umn.edu>

	* CandData/RecordSetupModule.cxx:


	Comment out change to fill JobRecHistory in CandRecord.  Since
	this scheme differs from that discussed in the last sw meeting,
	should give it time for review first.

2007-10-27 04:49  Sue Kasahara <schubert@hep.umn.edu>

	* CandData/RecordSetupModule.cxx:


	Create job record with key "Cand" and store it in CandRecord job history.

2007-10-27 04:47  Sue Kasahara <schubert@hep.umn.edu>

	* PhotonTransport/PhotonTransport.cxx:


	Create job record with key "PhotonTransport" and add it to SimSnarlRecord
	job history.

2007-10-27 04:42  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/PTSimModule.cxx:


	Add PTSim job environment to SimSnarlRecord job history.

2007-10-27 04:38  Sue Kasahara <schubert@hep.umn.edu>

	* RerootExodus/RerootToTruthModule.cxx:


	Record GMinos production information in SimSnarlRecord job history.

2007-10-27 02:46  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: LinkDef.h, RecJobHistory.cxx, RecJobHistory.h,
	  RecJobRecord.cxx, RecJobRecord.h, RecMinos.cxx, RecMinos.h,
	  RecRecordImp.cxx, RecRecordImp.h:


	New classes:
	1)RecJobRecord to hold information about the production/fill of a record.
	  Data members:
	   std::string  fProdName;  // production name (e.g. Cedar_phy)
	   std::string  fCodeName;  // code name (e.g. minossoft:<version> root:<vsn>)
	   std::string  fHostName;  // host on which job ran
	   VldTimeStamp fTimeStamp; // time when this job record was created
	  This is printed as (for example):
	[minossoft:S07-09-06-R1-26 root:v5.17/02 minos-pc8.spa.umn.edu 2007-10-27 02:31:53]

	  By default, the codename,hostname, and timestamp variables are filled from
	  the job environment. The prodname is optionally set as a global parameter
	  using:
	  RecJobRecord::SetGlobalProdName("production version");
	  e.g.
	  RecJobRecord::SetGlobalProdName("Cedar_phy");

	2)RecJobHistory stores a map of <std::string jobtype,RecJobRecord*> pairs.
	  Each entry corresponds to a section of job processing, e.g. "GMinos",
	  "PTSim","Cand",etc.  An enumerated list of possible job types is
	  is defined in the class, although the user is not limited to this
	  enumerated list.
	  This is printed as, for example:
	RecJobHistory:
	GMinos  [daikon_00 lcg0626.gridpp.rl.ac.uk 2006-12-17 01:01:00]
	PTSim   [Cedar_phy minossoft:S07-09-06-R1-26 root:v5.17/02 minos-pc8.spa.umn.edu 2007-10-26 19:14:20]
	NtpMC   [Cedar_phy minossoft:S07-09-06-R1-26 root:v5.17/02 minos-pc8.spa.umn.edu 2007-10-26 19:17:01]

	The record base classes RecMinos & RecRecordImp have new data member:
	    RecJobHistory      fJobHistory;   // info about jobs used to create/fill rec

2007-10-26 20:21  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolation.h,
	  Extrapolation/NCExtrapolationJK_fit.cxx,
	  Extrapolation/NCExtrapolationMQ.cxx,
	  Extrapolation/NCExtrapolationModule.cxx,
	  macros/nearFarExtrapolation.C, macros/nearFarExtrapolationData.C,
	  macros/nearFarExtrapolationMC.C:


	make it possible to select which contours to draw from the macros.

	also set the contours to draw in the NCExtrapolation::Prepare method
	and make the axis vectors data members

2007-10-26 18:26  boehm

	* NueAna/Module/NueModule.cxx:

	Updating the BeamType lookup function to have dates for Run2b

2007-10-26 18:12  Brian Rebel <brebel@fnal.gov>

	* NCUtils/macros/: nearFarExtrapolationData.C,
	  nearFarExtrapolationMC.C:

	specific scripts for running over data vs mc

2007-10-26 18:11  Brian Rebel <brebel@fnal.gov>

	* NCUtils/Extrapolation/: NCExtrapolation.cxx,
	  NCExtrapolationJK_fit.cxx:

	make sure parameters cant go negative when they are really small and
	make a bunch of contours

2007-10-26 17:45  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Contrib/pidtf/PanMaker/: PanMaker.cxx, PanMaker.h, example.C:

	Pick ReleaseType out from the data, instead of feeding it in remotely.
	Explicitly use FNAL database in example script.
	Default to correct EnergyCorrections.

2007-10-26 14:48  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/docs/ChangeLog:

	Minor RSD updates for SamWebClient, minossoft and CedarDaikon

2007-10-26 14:47  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/libs_and_builds/:
	  assemble_sam_web_client.sh, install_sam_web_client.sh:

	Support SamWebClient.

2007-10-26 14:46  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_minossoft.sh:

	Build and validate both unoptimised and optimised versions of minossoft.

2007-10-26 14:45  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat:

	Define new SamWebClient, Snapshot Release and CedarDaikon stacks

2007-10-26 14:44  kordosky

	* Contrib/rhatcher/gminos_jobs/run_ral.sh:

	try to make job resistant to kdc dropouts

2007-10-26 13:24  kordosky

	* Contrib/rhatcher/gminos_jobs/: check_mc_run_ral.sh,
	  submit_ral.sh, submit_ral_stdin.sh:

	modified production scripts for RAL

2007-10-26 11:46  scavan

	*
	  Production/Cedar_phy/MRCC/srsafitter/reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C:

	fixed bug in script so that muonremoval is attaced to Reco1 and not to Spill(which is not used in this script)

2007-10-26 10:08  Minos CVS group account.  Do not commit from here!

	* Contrib/pidtf/PanCreationMacros/: MCPOT.C, README,
	  countAllPOTs.sh, countMCPOTs.sh, countPOTs.C,
	  create_MC_PAN_template.sh, create_data_PAN_template.sh,
	  makeFidPan.C, mkFidPan.sh, mkSKZPWeights.sh, skzpweight.C,
	  splitfiles.sh, submit_MC_batch_jobs.sh, submit_batch_jobs.sh,
	  whatsmissing_MC.sh, whatsmissing_data.sh:

	Commit my PAN creation and mangling scripts

2007-10-26 10:06  Minos CVS group account.  Do not commit from here!

	* Contrib/pidtf/README:

	Import my Pan creation  and mangling macros and scripts

2007-10-26 06:28  nwest

	* GridTools/docs/: data_dcache.html, data_tutorial.html:

	Give example accessing dCache file directly ftom ROOT

2007-10-26 05:12  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_GridTools.sh:

	On top of software directory tree make setup_minos_lcg_grid.csh as a
	wrapper to invoke true script so that there is no need to set
	MOG_SCRIPTS.

2007-10-26 05:07  nwest

	* DatabaseMaintenance/tools/load_tables.sh:

	Enable the locking/unlocking of tables when reloading in full

2007-10-25 22:51  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Contrib/pidtf/: README, PanMaker/GNUmakefile, PanMaker/LinkDef.h,
	  PanMaker/PanMaker.cxx, PanMaker/PanMaker.h,
	  PanMaker/PanObjects.cxx, PanMaker/PanObjects.h,
	  PanMaker/example.C:

	Work in progress: Make a new standardized code for generating PANs.
	First commit: Pull all the branch() operations out and make a few generic objects to hold data structure instead.

2007-10-25 21:31  rustem

	* PhysicsNtuple/: Factory.h, Draw/DrawSnarl.cxx, Draw/DrawSnarl.h,
	  Select/SelectFiducial.cxx, Select/SelectFiducial.h,
	  macros/draw.C:



	Add more counting variables to SelectNeutrino. Also, add option to
	DrawSnarl for not storing empty snarls.

2007-10-25 20:46  kreymer

	* CVSROOT/check_access:

	AtNuOutput - added bspeak

2007-10-25 18:04  bckhouse

	* Production/Cedar_phy/restructure-chris/macros/add_to_path.C:

	add_to_path.C now accepts absolute paths, as well as release names.

2007-10-25 17:21  bckhouse

	* JobControl/: JobCPath.cxx, JobCPath.h:

	Add a function

	JobCNode* JobCPath::AddBetween(const char *moduleName, const char *methodName, const char *afterNodeName, const char *beforeNodeName)

	Similar to AddAt except it works out where to insert the new Node based on the names of the Nodes it should go after and before.

2007-10-25 15:54  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Contrib/pidtf/README:

	Create Contrib/pidtf area for CC PID task force to communicate code and files.

2007-10-25 15:21  nwest

	* GridTools/docs/sites.html:

	Document how to get SE capacity

2007-10-25 10:27  vahle

	* FDSpecWErrs/: RunFDSpec2007BoxOpen.C, reallyrunData.C,
	  newfitcode/DrawStuff.C, newfitcode/FNFit.cxx, newfitcode/FNFit.h,
	  newfitcode/justMakeTrees.C, newfitcode/justRunIT.C,
	  newfitcode/runFNFit.C:

	updating f/n code for stephen

2007-10-24 21:23  George Irwin <gmieg@slac.stanford.edu>

	* CVSROOT/check_access:

	Add Chris Backhouse to JobControl.

2007-10-24 19:17  rustem

	* PhysicsNtuple/: Handle.h, Truth.h, Select/BeamCut.cxx,
	  Select/BeamCut.h, Select/FiducialCut.cxx, Select/FiducialCut.h,
	  Select/SelectFiducial.cxx, Select/SelectFiducial.h,
	  macros/draw.C:



	A development snapshot.

2007-10-24 17:42  nwest

	* GridTools/docs/: data_tutorial.html, status_minos.html:

	Castor for Minos expected to be broken until end of November

2007-10-24 16:17  ishi

	* BeamMegaFit/: DoTheFit.C, FitData.h, FitPTRW.cxx, FitPTRW.h,
	  runaparamfit.C, input/fit_cedarphy_ro_tgtz_det.inp:

	More detector parameters are added.

2007-10-24 06:13  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_root.sh:

	Enable roofit.

2007-10-24 06:13  Nick West <n.west1@physics.oxford.ac.uk>

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/assemble_root.sh:

	Use SVN to check out files.

2007-10-24 06:13  Nick West <n.west1@physics.oxford.ac.uk>

	* GridTools/RemoteSoftwareDeployment/driver/terminate.pm:

	Enable write access before wiping work directory (some SVN files are
	write protected).

2007-10-24 00:32  rustem

	* UnfoldingData/: AlgReview.h, AlgUnfold.cxx, AlgUnfold.h,
	  CellVec.cxx, LinkDef.h, UnfoldModule.cxx, Review/PlotUnfold.cxx,
	  Review/PlotUnfold.h, Review/ReviewUnfold.cxx,
	  Review/ReviewUnfold.h, Test/AlgAssignTest.cxx,
	  Test/AlgAssignTest.h, Unfold/RunUnfoldEM.cxx,
	  Unfold/RunUnfoldEM.h, Unfold/SmoothEMS.cxx, macros/unfold_test.C:



	More polishing of UnfoldingData.

2007-10-24 00:16  George Irwin <gmieg@slac.stanford.edu>

	* NueAna/NueStandard.cxx:

	Move var1 declaration outside of case statement for GCC 3.2.3 and 3.3.4.

2007-10-23 22:47  rustem

	* PhysicsNtuple/macros/draw.C:



	Add a macro for drawing event displays.

2007-10-23 22:46  rustem

	* PhysicsNtuple/Hist1d.cxx:



	Remove hastily committed file.

2007-10-23 22:45  rustem

	* PhysicsNtuple/: Hist1d.cxx, LinkDef.h:



	For now, do not create CINT dictionary for Hist1d<T>.

2007-10-23 22:42  rustem

	* PhysicsNtuple/: Hist1d.h, LinkDef.h, kNNAlg/Event.cxx,
	  kNNAlg/Event.h, kNNAlg/FillkNN.cxx, kNNAlg/LikeModule.cxx,
	  kNNAlg/Node.cxx, kNNAlg/Node.h, kNNAlg/Result.cxx,
	  kNNAlg/Result.h, macros/make_ntuple.C:



	Add functionality to search k-nearest neighbors based on weight. Few other incremental changes.

2007-10-23 21:30  Sue Kasahara <schubert@hep.umn.edu>

	* MCNtuple/: NtpMCStdHep.cxx, NtpMCStdHep.h,
	  Module/NtpMCModule.cxx:


	Add new data member to NtpMCStdHep class:
	 Int_t ndethit;              // number of det digihits produced by this track
	to record the number of detector (non veto shield) hits produced by the
	track.
	Modify NtpMCModule to fill this variable and the new momentum variables
	in NtpMCStdHepHit.  The momentum variables are filled at the point of
	entry to the first and last detector energy deposition strip hits
	deposited by the given track. They are currently only filled using
	PTSim produced MC data.

	A print of the stdhep array now looks like this:

	=D= NtpMC [13011401|0] NtpMCModule.cxx:556>
	Print stdhep array of NtpMCStdHep w/912 entries:
	[0]-14/nu_mu_bar s: 0/Initial v: -0.249 -0.665 5.65 mc: 0
	   t(ns): 2.74e+03 p: -0.0224 -0.794 13.5 P: -1 -1 C: 4 4 ndethit: 0
	   [4]-13/mu+ s: 1/Final v: -0.249 -0.665 5.65 mc: 0
	      t(ns): 2.74e+03 p: 0.557 -0.759 5.59 P: 0 0 C: -1 -1 ndethit: 15
	      First Hit: 0096Vt056 v:-0.245,-0.67,5.69 t(ns):2.74e+03 p:0,0,0 E:5.66
	      Last  Hit: 0171Ut005 v:0.232,-1.79,10.1 t(ns):2.76e+03 p:0,0,0 E:3.02
	...

	for GMINOS produced data, and like this:

	[0]-14/nu_mu_bar s: 0/Initial v: -0.249 -0.665 5.65 mc: 0
	   t(ns): 2.74e+03 p: -0.0224 -0.794 13.5 P: -1 -1 C: 4 4 ndethit: 0
	   [4]-13/mu+ s: 1/Final v: -0.249 -0.665 5.65 mc: 0
	      t(ns): 2.74e+03 p: 0.557 -0.759 5.59 P: 0 -1 C: 160 161 ndethit: 16
	      First Hit: 0096Vt056 v:-0.245,-0.671,5.69 t(ns):2.74e+03 p:0.54,-0.821,5.56 E:5.65
	      Last  Hit: 0171Ut005 v:0.241,-1.79,10.1 t(ns):2.75e+03 p:0.354,-1.09,2.57 E:2.82
	...

	for PTSim produced data, the difference being that the momentum variables of
	the parent particle associated with the energy deposition first/last hits are
	filled in the PTSim case.

	This information is especially useful in the case of rock or cosmic ray
	muon events for which one wishes to know the parent particle energy at
	the point of entry (defined here as the first hit strip) to the detector.

2007-10-23 21:04  Sue Kasahara <schubert@hep.umn.edu>

	* MCNtuple/: NtpMCStdHepHit.cxx, NtpMCStdHepHit.h:


	Add parent particle momentum to stored data at first/last detector
	hit associated with track.

2007-10-23 21:02  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/PTSimHit.cxx:


	Add fill of parent particle momentum at entry to hit strip to creation
	of DigiScintHit.

2007-10-23 20:59  Sue Kasahara <schubert@hep.umn.edu>

	* Digitization/: DigiScintHit.cxx, DigiScintHit.h:


	Add parent particle momentum at point of entry to hit strip.

2007-10-23 20:48  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/TGeant3/TGeant3.cxx:


	Modified TGeant3::G3toVMC method to:
	1)translate G3 hollerith "ECOH" to TMCProcess::kPHElastic instead of
	  TMCProcess::kPUnknown.
	2)print error message when fail to find matching VMC TMCProcess for input
	  G3 process code.

2007-10-23 20:11  boehm

	* Contrib/boehm/AnaNuePlot/: AnaNuePlotMaker.cxx,
	  AnaNuePlotMaker.h, RunSample.C:

	A few random updates to keep comparison code alive in the repository

2007-10-23 18:54  ahimmel

	* NuMuBar/: NuDSTAna.cxx, NuPlots.cxx, NuPlots.h:



	Modified FillCounts and assosciated files to perform background-subtracted
	selection studies.

2007-10-23 17:19  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_far_cosmic_cedar_phy.C,
	  reco_far_spill_cedar_phy.C, headers/set_msg_levels_far_all.h,
	  headers/far_all_mc/far_all_mc_configure.h,
	  headers/far_all_mc/far_all_mc_create_path.h,
	  headers/io/attach_output.h:

	reco_MC_daikon_far_cosmic_cedar_phy.C and minor changes

2007-10-23 12:44  musser

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	improved calculation of range for tracks ending in coil

2007-10-23 12:38  scavan

	* Production/Cedar_phy/MRCC/srsafitter/:
	  reco_MC_daikon_far_MRCC_cedar_phy_srsafitter.C,
	  reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_MRCC_cedar_phy_srsafitter.C,
	  reco_MC_daikon_far_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_cedar_phy_srsafitter.C,
	  reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_cedar_phy_srsafitter.C,
	  reco_near_spill_MRCC_cedar_phy_srsafitter.C,
	  reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	removed all set_tsql..... from the scripts (the script set_tsql_override.C is run before these scripts now)

	removed old files (which have been renamed to the new files)

2007-10-23 12:27  scavan

	* Production/Cedar_phy/MRCC/srsafitter/:
	  reco_MC_daikon_far_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_far_cosmic_MRCC_srsafitter_cedar_phy.C,
	  reco_MC_daikon_near_MRCC_srsafitter_cedar_phy.C,
	  reco_far_all_MRCC_srsafitter_cedar_phy.C,
	  reco_near_spill_MRCC_srsafitter_cedar_phy.C:

	renamed scripts so that they work better with farm scripts

	suffix was MRCC_cedar_phy_srsafitter
	and now is
	MRCC_srsafitter_cedar_phy

2007-10-23 09:41  nwest

	* GridTools/docs/: index.html, status_minos.html:

	Start a 'Status' section 'Minos' to hold items specific to Minos

2007-10-23 05:21  nwest

	* GridTools/:
	  RemoteSoftwareDeployment/libs_and_builds/build_config_table.dat,
	  docs/ChangeLog:

	Support Subversion installation. Add  Snapshot Release S07-10-22-R1-26

2007-10-23 05:21  nwest

	* GridTools/RemoteSoftwareDeployment/libs_and_builds/:
	  assemble_subversion.sh, install_subversion.sh:

	Support Subversion installation

2007-10-23 04:42  nwest

	* WebDocs/SnapshotRel.html:

	Add S07-10-22-R1-26

2007-10-23 04:40  nwest

	* setup/packages-S07-10-22-R1-26:

	First commit

2007-10-22 22:42  bspeak

	* RunSummary/rate_plot.cc:

	Add a few lines of output to denote the run time, and force the process to
	not read the overflow bin.

2007-10-22 21:59  rustem

	* UnfoldingData/: FcnSmooth.h, Smooth/AlgMinuitFit.cxx,
	  Smooth/AlgMinuitFit.h, Smooth/FitFcn.cxx, Smooth/FitFcn.h,
	  Smooth/GNUmakefile, Smooth/LinkDef.h, Smooth/PolNFcn.cxx,
	  Smooth/PolNFcn.h:



	It is bad idea to try to smooth distributions using MINUIT fit, so remove all MINUIT2
	hooks.

2007-10-22 21:48  rustem

	* UnfoldingData/Unfold/: SmoothEMS.cxx, SmoothEMS.h:



	Add smoothing algorithm, as described in:

	B. W. Silverman et al, J. R. Statist. Soc. B (1990), 52 (2), 271-324

	Bins are smooothed using binomial weights of nearby bins.

2007-10-22 21:47  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCOscProb.cxx, NCType.h,
	  Extrapolation/NCExtrapolation.cxx,
	  Extrapolation/NCExtrapolationJK_fit.cxx,
	  Extrapolation/NCExtrapolationMQ.cxx,
	  Extrapolation/NCExtrapolationModule.cxx:

	changes to make use of the parke model

2007-10-22 21:46  rustem

	* UnfoldingData/: AlgSmooth.h, GNUmakefile, UnfoldModule.cxx,
	  Unfold/RunUnfoldEM.cxx, Unfold/RunUnfoldEM.h,
	  macros/unfold_test.C:



	Commit minor changes.

2007-10-22 21:34  bspeak

	* RunSummary/rate_plot.cc:

	Add local time axis on top of plot when using UTC X-Axis
	This functionality may break compilation on MacOS, sorry if it does.

2007-10-22 21:20  boehm

	* NueAna/NueStandard.cxx:

	making sure the far det also gets the goodbeammon cut and spilltype cut

2007-10-22 20:59  ishi

	* CVSROOT/check_access:

	Add the write access to BeamMegaFit by ishi and rearmstr with
	permission by original authers.

2007-10-22 19:43  boehm

	* NueAna/NueStandard.cxx:

	Adjusting the pid value for MCNN

2007-10-22 18:25  boehm

	* MuonRemoval/: RemoveMuon.cxx, RemoveMuon.h:

	Same update as to R1-24

	Updating MuonRemoval so it can handle running with two track finding algorithms going at the same time.

2007-10-22 18:24  boehm

	* MuonRemoval/: RemoveMuon.cxx, RemoveMuon.h:

	Updating MuonRemoval so it can handle running with two track finding algorithms going at the same time.

2007-10-22 16:34  scavan

	* MuonRemoval/SelectEvent.cxx:

	cleaner fix to satrack-srtrack compare bug by replacing IsEquivilent with IsEqual

2007-10-22 16:28  scavan

	* MuonRemoval/SelectEvent.cxx:

	on line 63 replaced IsEquivilent with IsEqual which seems to fix a problem that occurs when satracks are compared to srtracks

2007-10-22 15:59  boehm

	* NueAna/: BagTree.cxx, BagTree.h, BagTreeAna.cxx, BagTreeAna.h:

	Neglected to actually add the new files

2007-10-22 15:51  boehm

	* NueAna/: LinkDef.h, NueRecord.cxx, NueRecord.h, NueRecordAna.cxx,
	  NueRecordAna.h:

	Adding a dummy branch that can hold bag tree information for use with the bagged decision tree's I've been working on.  Not currently activated since not useful for most people and will just slow things down.

2007-10-22 15:44  zarko

	* BeamMegaFit/: DoTheFit.C, FitPTRW.cxx, runaparamfit.C,
	  data/data_hist_cedarphy_ro_scaled.root, data/na49.root,
	  input/fit_cedarphy_ro_tgtz.inp:

	Added fitting for target z. Changed to NA49 data as central value for pi+/pi-.
	Fixed penalty term bug (add penalty terms only once).

2007-10-22 15:32  boehm

	* NueAna/: ANtpEventInfoAna.cxx, NueStandard.cxx, NueStandard.h,
	  Module/NueBeamMonModule.cxx:

	Adjusting a few parameters to allow for making the more complicated
	FarDet data quality cuts

2007-10-22 15:21  rustem

	* UnfoldingData/Unfold/: AlgUnfoldEM.cxx, AlgUnfoldEM.h:



	Rename unfolding algorithm from AlgUnfoldEM to RunUnfoldEM, "Alg" preffix is usually
	reserved for ABC algorithm classes.

2007-10-22 15:20  rustem

	* UnfoldingData/Review/: ReviewUnfold.cxx, ReviewUnfold.h:



	The main plotting engine:

	1) Make histogram of observed (data) and hidden (true) distributions for each unfolding
	step

	2) Plot chi2 and loglikelihood (to do) for distributions from 1 with each iteration
	step

	3) No longer attepmt to plot distributions in user's coordinate,  just use cell (bin)
	number for X axis

	4) Store results of each test in smart handle to PlotUnfold, in destructor of
	ReviewUnfold, make summary plots for all tests: chi2 vs iteration number, chi2 at last
	iteration, etc.

2007-10-22 15:17  rustem

	* UnfoldingData/Unfold/: RunUnfoldEM.cxx, RunUnfoldEM.h:



	This is a main unfolding allgorithm that implements the classical EM unfolding
	algorithm, as proposed by Y. Vardi, L.A. Shepp and L. Kaufman.

2007-10-22 15:14  rustem

	* UnfoldingData/Near/: AlgAssignNear2d.cxx, AlgAssignNear2d.h:



	For now, give up on unfolding 2d histograms.

2007-10-22 15:13  rustem

	* UnfoldingData/: AlgFactory.cxx, AlgFactory.h, AlgSmooth.cxx,
	  Base.cxx, Base.h, Bin.cxx, Bin.h, Event.cxx, Event.h,
	  FcnSmooth.cxx, Handle.h, Review/AlgFile.cxx, Review/AlgFile.h,
	  Review/ComplexKey.cxx, Review/ComplexKey.h, Review/PlotTest.cxx,
	  Review/PlotTest.h, Review/PlotVector.cxx, Review/PlotVector.h:



	Remove old files for redundant classes.

2007-10-22 15:12  rustem

	* UnfoldingData/: AlgAssign.cxx, AlgAssign.h, AlgReview.h,
	  AlgSmooth.h, AlgUnfold.cxx, AlgUnfold.h, Cell.cxx, Cell.h,
	  CellVec.cxx, CellVec.h, FcnSmooth.h, GNUmakefile, LinkDef.h,
	  Matrix.cxx, Matrix.h, UnfoldModule.cxx, UnfoldModule.h,
	  Near/AlgAssignNear.cxx, Near/AlgAssignNear.h, Near/LinkDef.h,
	  Review/LinkDef.h, Review/PlotUnfold.cxx, Review/PlotUnfold.h,
	  Smooth/AlgMinuitFit.cxx, Smooth/AlgMinuitFit.h,
	  Smooth/FitFcn.cxx, Smooth/FitFcn.h, Smooth/LinkDef.h,
	  Smooth/PolNFcn.cxx, Smooth/PolNFcn.h, Test/AlgAssignTest.cxx,
	  Test/AlgAssignTest.h, Test/LinkDef.h, Unfold/LinkDef.h,
	  macros/unfold_test.C:



	A major upgrade/rewrite to UnfoldingData package:

	1) Switch to Anp namespace (was Unp)

	2) Switch to using Factory and Handle from PhysicsNtuple

	3) Remove redundant classes: Bin, Event, etc

	4) Upgrade plotting code, no longer attempt to make plots in user's coordinates (it is
	just too complicated). Streamline and modernize all plotting routines.

	5) Prepare for an addition of EMS algorithm that implements smoothing with binomial
	distribution.

	6) Prepare for an addition of the near detector unfolding.

2007-10-22 11:02  nwest

	* WebDocs/SnapshotRel.html:

	Belatedly update for S07-09-20-R1-26

2007-10-22 11:00  nwest

	* WebDocs/subversion.html:

	Fix minor typo in installation instructions

2007-10-22 05:14  nwest

	* GridTools/docs/ChangeLog:

	RSD and Script bug fixes.

2007-10-22 05:14  nwest

	* GridTools/Scripts/setup/setup_minos_lcg_grid.sh:

	Bug fix: Define DCM_HOME before using run_get_site_info.perl.
	         Check the application version exist before defining MOG_APP_DIR

2007-10-22 05:14  nwest

	*
	  GridTools/RemoteSoftwareDeployment/libs_and_builds/install_minossoft.sh:

	Bug fix: when setting BMAPPATH, include host platform suffix in soft link to pro.

2007-10-22 05:13  nwest

	* GridTools/: DataCacheManager/init.pm,
	  DataCacheManager/docs/dcm.html,
	  RemoteSoftwareDeployment/doc/rsd.html,
	  RemoteSoftwareDeployment/driver/initialise_globals.pm,
	  Scripts/maintenance/version_number:

	Update to version V00-07-42

2007-10-20 19:49  annah1

	* NueAna/: SubShowerVar.h, SubShowerVarAna.cxx, SubShowerVar.cxx:

	Adding newly trained pid - Anna H. 20 Oct 07

2007-10-20 19:46  annah1

	* NueAna/: HighHitVars.cxx, HighHitVars.h, HighHitVarsAna.h,
	  HighHitVarsAna.cxx, LinkDef.h, NueRecord.h, NueRecord.cxx,
	  NueRecordAna.cxx, NueRecordAna.h, SubShowerNN_Ent.cxx,
	  SubShowerNN_Ent.h:

	Adding new set of Variables HighHitVars - Anna H. 20 Oct 07

2007-10-20 11:24  Minos CVS group account.  Do not commit from here!

	* Contrib/rhatcher/gminos_jobs/: run_tufts.sh,
	  setup_tufts_bundle.sh:

	updating tufts scripts

2007-10-19 22:49  George Irwin <gmieg@slac.stanford.edu>

	* NueAna/NueAnaTools/: DecisionTreeReader.cxx, NueConvention.cxx:

	Add ' #include <cassert> ' to DecisionTreeReader. Comment out declaration
	of unused variable isMC in NueConvention to quiet compiler warnings.

2007-10-19 22:48  tjyang

	* NueAna/: FracVar.cxx, FracVar.h, FracVarAna.cxx:

	change back to use shower strips instead of event strips

2007-10-19 20:51  jpochoa

	* NueAna/: MCNNBestMatch.cxx, MCNNBestMatch.h:

	Added TClonesArray of stdhep to each best match object MCNNBestMatch, although by default it will not be filled.

2007-10-19 19:17  ahimmel

	* NuMuBar/tools/sam.pl:


	Brought my function (now called runJobRunII) up to date with the new changes to the code.

2007-10-19 18:08  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/external_products.html:

	add minuit2 and roofit as additional packages that should be enabled.

2007-10-19 16:48  bckhouse

	* Production/Cedar_phy/restructure-chris/reco_far_all_cedar_phy.C:

	Missing line.

2007-10-19 16:47  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_far_all_cedar_phy_srsafitter.C,
	  headers/io/attach_output_srsafitter.h:

	reco_far_all_cedar_phy_srsafitter.C

2007-10-19 14:52  rodriges

	* Contrib/rodriges/HistPainter/: README, mypainter.cxx,
	  mypainter.h, testmypainter.C:

	A geeky way to stop stats boxes overlapping, resize histogram y axes automatically, and other minor niceties

2007-10-19 13:57  hartnell

	* NtupleUtils/doc/cssSystematicsDSTs.html:


	Add details of version 2 of the NuDSTs: they have NC-PID variabls and
	Justin's majority curvature is now included as standard.

2007-10-19 13:13  vahle

	* NueAna/NueFluxWeights.cxx:

	Clearing vectors when deleting NueFluxWeight object

2007-10-18 22:08  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/subversion.html:

	commit what I've got so far about using subversion.

2007-10-18 21:35  boehm

	* NueAna/NueAnaTools/: DecisionTreeReader.cxx,
	  DecisionTreeReader.h, LinkDef.h:

	Added a class that allows for reading decision tree files into the framework

2007-10-18 20:58  boehm

	* NueAna/: NueFluxWeightsAna.cxx, Module/NueModule.cxx:

	Ironing out some version sheer between Trish and my committing frenzy

2007-10-18 20:23  boehm

	* NueAna/: NueFluxWeightsAna.cxx, NueFluxWeightsAna.h:

	Tweaking the beam parameters to make sure its all smooth

2007-10-18 20:23  vahle

	* NueAna/Module/: NueModule.h, NueModule.cxx:

	Chaning NueModule so that SKZPBeamWeightCalculator gets the Zarko beam type it wants, not the beam type from conventions

2007-10-18 20:13  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/external_products.html:

	a bit more clarification about the relationship between cvs and subversion.

2007-10-18 20:10  kordosky

	* Contrib/rhatcher/gminos_jobs/: run_ral.sh, setup_ral_bundle.sh:

	default now to daikon_04

2007-10-18 19:58  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/: external_products.html, subversion.html:

	spin "subversion" info off to separate page.

2007-10-18 19:42  kordosky

	* Contrib/rhatcher/gminos_jobs/copy_to_stage.sh:

	now try to copy a file multiple times if the md5check fails

2007-10-18 18:51  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/install.html:

	mention that the "external products" includes sigc++, pythia6, ROOT
	and subversion -- just so people follow the links for help.

2007-10-18 18:47  kordosky

	* Contrib/rhatcher/gminos_jobs/: check_mc_run_ral.sh,
	  jobstatscript_ral.sh:

	new (to CVS) scripts for checking mc output at RAL

2007-10-18 18:35  boehm

	* NueAna/: AnalysisInfoAna.cxx, AnalysisInfoAna.h,
	  MuonRemovalInfoAna.cxx, NueAnaBase.h, NueFluxWeightsAna.h,
	  NueRecordAna.cxx, NueRecordAna.h, NueStandard.h,
	  Module/NueBeamMonModule.cxx, Module/NueModule.cxx,
	  Module/NueModule.h, macros/MakeAnaNueTree.C:

	Additional Changes to NueAna in preparation for Ent:

	AnalysisInfo cleaned up a little to move the building files for the CCPIDs out of the way

	Gave NueAnaBAse a BeamType variable so everyone now gets to know what type of beam they are processing.  This simplifies making the PIDs behave correctly and other things looking for beamtype

	This made the MakeAnaNueTree macro need less lines of code.

	Removed from NueModule/NueBeamModule no longer needed registry settings

2007-10-18 17:24  bckhouse

	* Production/Cedar_phy/restructure-chris/headers/:
	  set_calibrator_simple.h, set_msg_levels_mc.h, set_sm2_bfield.h,
	  io/set_input_mc.h:

	Files I somehow missed.

2007-10-18 17:15  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cedar_phy_srsafitter.C,
	  headers/io/attach_output_mc_srsafitter.h,
	  headers/util/set_ntpst_output_bntpsa.h:

	reco_MC_daikon_near_cedar_phy_srsafitter.C

2007-10-18 16:49  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_MC_daikon_near_cosmic_cedar_phy.C,
	  headers/io/attach_output_mc.h:

	reco_MC_daikon_near_cosmic_cedar_phy.C

2007-10-18 16:11  vahle

	* NueAna/NueFluxWeightsAna.cxx:

	fixing NueFluxWeightsAna, it compiles now

2007-10-18 16:04  vahle

	* MCReweight/SKZPWeightCalculator.h:

	Update SKZPWeightCalc to figure out runperiod if given an int

2007-10-18 15:52  scavan

	*
	  Production/Cedar_phy/MRCC/srsafitter/reco_near_spill_MRCC_cedar_phy_srsafitter.C:

	added message settings to script

	      jc.Msg.SetLevel("RmMu","Fatal");
	      jc.Msg.SetLevel("AlgRmMu","Fatal");

2007-10-18 15:52  vahle

	* NueAna/NueFluxWeights.cxx:

	adding run period weights to nuefluxweights. untested, as of yet

2007-10-18 15:40  bckhouse

	* Production/Cedar_phy/restructure-chris/:
	  reco_near_spill_cedar_phy_srsafitter.C,
	  headers/io/attach_output_srsafitter.h,
	  headers/util/get_record_title.h,
	  headers/util/set_ntpst_output_bntpsa.h, macros/load_libs.C:

	Make a start on the srsafitter macros.

2007-10-18 15:22  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Typo fix. Now actually plot the significance levels that were asked for.

2007-10-18 15:18  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Maybe I should have checked it compiled first.

2007-10-18 15:16  bckhouse

	* NCUtils/Extrapolation/NCExtrapolation.cxx:

	Fix canvas axes.

2007-10-18 15:00  vahle

	* NueAna/: NueFluxWeights.h, NueFluxWeights.cxx,
	  NueFluxWeightsAna.cxx:

	adding run period weights to nuefluxweights. untested, as of yet

2007-10-18 14:19  hartnell

	* NtupleUtils/: NuReco.cxx, NuReco.h:


	Added:
	void CapTrackMomentum(Double_t& trkMom) const;

	This caps the track momentum at 1000 GeV. A value of 1e19 caused an fpe
	when trying to square it.

	Also now more consistently use Doubles rather than Floats.

2007-10-18 13:57  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h,
	  NCExtrapolationJK_fit.cxx, NCExtrapolationMQ.cxx:

	Generalize contour finding:
	The set of variables to plot against each other is now specified as arguments to the MakeDeltaChiSqrMaps call, making the LazyContoursWantFSterSinsq etc options in the macro useless.

	Not heavily tested...

2007-10-18 12:41  bckhouse

	* NCUtils/Extrapolation/: NCExtrapolation.cxx, NCExtrapolation.h:

	Minor tidying in preparation for generalization of contour finding.