2006-04-24 20:43  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	make it possible to toggle between the 12 and 15 parameter fits for
	FindZBeamWeight and FindSKZPWeight

2006-04-24 18:20  Ed Larty <lartey@hepr0.physics.tamu.edu>

	* setup/packages-R1.22-tmp:

	# new tmp file for next release

2006-04-24 17:11  Brett Viren <bv@bnl.gov>

	* CVSROOT/: check_access, modules:

	Add package for Rustem

2006-04-24 17:09  Brett Viren <bv@bnl.gov>

	* PhysicsNtuple/.cvsignore:

	Initial revision

2006-04-24 17:09  Brett Viren <bv@bnl.gov>

	* PhysicsNtuple/.cvsignore:

	Start of package

2006-04-24 17:05  chapman

	* AtNuReco/AlgAtmosShowerList.cxx:

	change to cvsid in debug message

2006-04-24 17:03  chapman

	* AtNuOutput/: AtmosCalculator.cxx, AtmosCalculator.h,
	  NtpMaker.cxx:

	Added protection against a couple of failure modes.

2006-04-24 15:41  blake

	* Filtration/macros/dataqualityfilter.C:

	[no log message]

2006-04-24 15:39  blake

	* AtNuOutput/: reco_MC.C, reco_data.C:

	updating scripts to accommodate new dependency of CandMorgue on DcsUser

2006-04-24 15:36  blake

	* CandMorgue/: FillHvFromSingles.cxx, FillHvFromSingles.h,
	  GNUmakefile, LinkDef.h, RawReadout.cxx, dataquality.C,
	  dumpbadelectronics.C, fillhvfromsingles.C:

	adding a module to fill the DbuHvFromSingles database

2006-04-24 15:33  habig

	* DcsUser/: CoilStatus.cxx, CoilStatus.h:

	Added kUnknown state to CoilStatus

2006-04-24 15:07  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* SpillTiming/: SpillTimeFinder.cxx, SpillTimeFinder.h:

	Remove unneccesary and confusing time-window optimization in order to clean up code.
	Attempt at removing the Heisenbug: occasionally the STF would get corrupted and start returning
	bad values. This behaviour was not repeatable, and I believe is due to a dangling pointer.
	Change to copying the SpillTimeND objects, rather than copies of pointers.. it would appear that
	a DbiResultPtr's data can move under some conditions.

2006-04-21 20:28  Robert Hatcher <rhatcher@fnal.gov>

	* RerootExodus/: RerootToTruthModule.cxx, RerootToTruthModule.h:

	Make what to dump in Ana() configurable via module's registry.
	New option to dump REROOT_StdHepHead entries (if gMINFast is available)

2006-04-21 20:27  Robert Hatcher <rhatcher@fnal.gov>

	* RerootExodus/: RerootExodus.cxx, RerootExodus.h:

	interface to retrieve TClonesArray of REROOT_StdHepHead entries from gMINFast.

2006-04-21 17:51  blake

	* AtNuUtils/: FarDetCandStripDump.cxx, FarDetCandStripDump.h,
	  GNUmakefile, LinkDef.h, my_muon_analysis.C:

	making room for atmos ntuple analysis code

2006-04-21 17:40  blake

	* FarDetDataQuality/: AlgFarDetDataQuality.cxx,
	  AlgFarDetDeadChip.cxx, DBtxt_AlgFarDetDataQuality_default.C,
	  DBtxt_AlgFarDetDeadChip_default.C, FarDetDataQuality.cxx,
	  FarDetDataQuality.h, FarDetDataQualityHandle.cxx,
	  FarDetDataQualityHandle.h, FarDetDataQualityModule.cxx,
	  FarDetDataQualityModule.h, FarDetDeadChipHandle.cxx,
	  FarDetDeadChipModule.cxx, FarDetDeadChipModule.h,
	  FarDetRawDigitDump.cxx, FarDetRawDigitDump.h,
	  FarDetRawRateDump.cxx, FarDetTpSinglesDump.cxx,
	  FarDetTpSinglesDump.h, FarDetVarcErrorsDump.cxx,
	  FarDetVarcErrorsDump.h, GNUmakefile, LinkDef.h, SnarlHeader.cxx,
	  SnarlHeader.h, SpillServHeader.cxx, SpillServHeader.h,
	  VarcErrHeader.cxx, VarcErrHeader.h, fardet_diagnostic.C,
	  fardet_quality_MC.C, fardet_rawdigits.C, fardet_rawdigits_MC.C,
	  fardet_singles.C, fardet_tpsingles.C, fardet_varcerrors.C:

	Changes to FarDetDataQuality:
	  spill server blocks and varc error blocks processed
	  number of crates in readout recorded
	  cold chips divided up by supermodule
	  a few small bug fixes
	(N.B: This package has now been superseded by CandMorgue)

2006-04-21 17:23  cbs

	* CandShowerSR/AlgShowerSSList.cxx:

	Fix to prevent out of bounds array member access

2006-04-21 17:21  chapman

	* AtNuOutput/: DBtxt_AlgFarDetEventList_default.C,
	  DBtxt_AlgFarDetEvent_default.C:

	DB text files will contain constants for atmospheric shower calibration - currently placeholders

2006-04-21 17:19  chapman

	* AtNuReco/: AlgAtmosShowerList.cxx, AlgAtmosShowerList.h,
	  AlgShowerCam.cxx, AlgShowerCam.h, AtmosShowerListModule.cxx,
	  AtmosShowerListModule.h, ClusterCam.cxx, ClusterCam.h,
	  DBtxt_AlgAtmosShowerList_default.C, DBtxt_AlgShowerCam_default.C,
	  HitCam.cxx, HitCam.h, LinkDef.h, ShowerCam.cxx, ShowerCam.h,
	  ShowerSegmentCam.cxx, ShowerSegmentCam.h, TrackCam.cxx,
	  TrackCam.h, TrackSegmentCam.cxx, TrackSegmentCam.h:

	Separate shower finder for use with new track finding package

2006-04-21 17:15  chapman

	* AtNuOutput/reco_MC.C:

	new reco MC script

2006-04-21 17:13  chapman

	* AtNuOutput/reco_data.C:

	new script for data

2006-04-21 16:59  chapman

	* AtNuOutput/LinkDef.h:

	added new classes

2006-04-21 16:58  chapman

	* AtNuOutput/: FarDetEvent.cxx, FarDetEvent.h,
	  FarDetEventHandle.cxx, FarDetEventHandle.h,
	  FarDetEventModule.cxx, FarDetEventModule.h,
	  FarDetShieldPlank.cxx, FarDetShieldPlank.h,
	  FarDetShieldPlankHandle.cxx, FarDetShieldPlankHandle.h,
	  FarDetShieldPlankListModule.cxx, FarDetShieldPlankListModule.h,
	  FarDetSliceListModule.cxx, FarDetStrip.cxx, FarDetStrip.h,
	  FarDetStripHandle.cxx, FarDetStripHandle.h,
	  FarDetStripListModule.cxx, FarDetStripListModule.h:

	various updates

2006-04-21 16:57  chapman

	* AtNuOutput/AlgFarDetStrip.cxx:

	ph calibration chain added

2006-04-21 16:54  chapman

	* AtNuOutput/AlgFarDetShieldPlank.cxx:

	now uses shield timing calibration

2006-04-21 16:48  chapman

	* AtNuOutput/: NtpMaker.cxx, NtpMaker.h:

	NtpMaker is now pretty much reconstruction package independent

2006-04-21 16:38  chapman

	* AtNuOutput/: AlgFarDetEvent.h, AlgFarDetEvent.cxx:

	changed algorithm to allow for future shower energy calibration for Enu calculation

2006-04-21 16:34  chapman

	* AtNuOutput/: AlgFarDetEventList.h, AlgFarDetEventList.cxx,
	  FarDetEventList.h, FarDetEventList.cxx, FarDetEventListHandle.h,
	  FarDetEventListHandle.cxx:

	Added to make access to FarDetEventHandles the same as for SR counterparts.

2006-04-21 16:31  chapman

	* AtNuOutput/: AtmosCalculator.h, AtmosCalculator.cxx:

	Calculates atmospheric analysis variables for inclusion in ntuples
	makes ntuple filling independent of the reconstruction packages used.

2006-04-21 16:27  chapman

	* AtNuEvent/LinkDef.h:

	add AtmosSpill to list of classes

2006-04-21 16:26  chapman

	* AtNuEvent/: AtmosTrack.h, AtmosTrack.cxx:

	changed variable names + added variables used in upward muon analysis by Brian

2006-04-21 16:24  chapman

	* AtNuEvent/: AtmosStrip.h, AtmosStrip.cxx:

	added PH calibration chain variables

2006-04-21 16:22  chapman

	* AtNuEvent/: AtmosShower.h, AtmosShower.cxx:

	changed variable names

2006-04-21 16:21  chapman

	* AtNuEvent/: AtmosShieldPlank.h, AtmosShieldPlank.cxx:

	Tcorr -> Traw

2006-04-21 16:19  chapman

	* AtNuEvent/: AtmosScintHit.h, AtmosScintHit.cxx:

	positions now given as 2 element arrays showing where the particle entered/exited the strip

2006-04-21 16:17  chapman

	* AtNuEvent/: AtmosMC.h, AtmosMC.cxx, AtmosReco.h, AtmosReco.cxx:

	removed unnecessary TObject inheritance + new variables

2006-04-21 16:15  chapman

	* AtNuEvent/: AtmosFilter.h, AtmosFilter.cxx:

	removed unnecessary TObject inheritance

2006-04-21 16:14  chapman

	* AtNuEvent/AtmosEvent.cxx:

	added AtmosSpill member variable

2006-04-21 16:13  chapman

	* AtNuEvent/AtmosEvent.h:

	removed unnecessary TObject inheritance + added AtmosSpill member variable

2006-04-21 16:12  marshall

	* CandTrackCam/: AlgTrackCam.cxx, AlgTrackCamList.cxx,
	  AlgTrackCamList.h, ClusterCam.cxx, TrackCam.cxx, TrackCam.h,
	  TrackCamListModule.cxx, TrackSegmentCam.cxx:

	First set of refinements made to the initial track finding algorithm.

2006-04-21 16:12  chapman

	* AtNuEvent/: AtmosDeadChip.h, AtmosDeadChip.cxx:

	changed variables to reflect info available in new DataQuality Module.

2006-04-21 16:12  marshall

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	Made change to trace calculation, so that traces are negative if the track vertex is reconstructed outside detector.

2006-04-21 16:11  chapman

	* AtNuEvent/: AtmosData.h, AtmosData.cxx:

	changed member variables to make them clearer and added some new ones so all the relevant information from
	Andy B's DataQuality Module in the CandMorgue package can be accessed in ntuples

2006-04-21 16:07  chapman

	* AtNuEvent/AtmosSpill.cxx:

	new class containing spill info for use in vetoing beam events

2006-04-21 16:06  chapman

	* AtNuEvent/AtmosSpill.h:

	AtmosSpill contains information on spills - which can be used to veto beam events in the atmospheric analyses.

2006-04-21 13:26  vahle

	* BeamMegaFit/: FitPTRW.cxx, macros/MakeDataHists.C,
	  macros/MakeFilterTrees.C:

	Adding macros dir and two macros to make the data and mc histograms used in the fitting

2006-04-20 20:47  boehm

	* NueAna/: AngClusterFitAna.cxx, AngClusterFitAna.h,
	  NueBeamMonModule.cxx, NueBeamMonModule.h, ShwfitAna.cxx,
	  ShwfitAna.h, macros/MakeAnaNueTree.C:

	With the PotTree working there is no need for the potlog files so they have been removed from the output options.

	Also in response to the changes in root 5 that cause segfaults in Shower fitting, I have imported the old GetMaximum and GetMaximumX code from root 4 into the AngClusterFitAna and ShwfitAna classes to allow them to run as before without crashing.

2006-04-20 19:51  Robert Hatcher <rhatcher@fnal.gov>

	* Plex/: Plexus.cxx, Plexus.h:

	Provide a means for forcing PlexSEIdAltL when initially created (i.e.
	before it has weights) to be ordered by PlexStripEndId as opposed to
	whatever order happened to be returned from the DB in building a map.
	For now this option is off by default; one can turn it on via:
	   Plexus::SetAltLInitiallySortedBySEId(true);
	Not the most elegant approach, but it will do for now.  I don't have a
	sense of how much overhead turning this on would introduce but it remains
	an option for future DB tests.

2006-04-20 18:56  mdier

	* WebDocs/database_inventory/: dbuhvfromsingles.cfg,
	  hvdbifromsingles.cfg:

	Renaming of Alec's new hv status table

2006-04-20 18:25  habig

	* DcsUser/: DbuHvFromSingles.cxx, DbuHvFromSingles.h,
	  DbuHvFromSingles_Example.C, HvDbiFromSingles.cxx,
	  HvDbiFromSingles.h, HvDbiFromSingles_Example.C, LinkDef.h:

	Renamed HvDbiFromSingles to DbuHvFromSingles as requested by Nick.

2006-04-20 15:03  Robert Hatcher <rhatcher@fnal.gov>

	* TriD/TridGLFrame.cxx:

	semi-colons springing up in weird places, gcc doesn't like "#endif;".

2006-04-20 12:23  vahle

	* NueAna/macros/RunNueDisplay.C:

	Updating RunNueDisplay to change the order of loading StandardNtuple and TruthHelperNtuple libraries

2006-04-20 11:46  Nick West <n.west1@physics.oxford.ac.uk>

	* UserManualDoc/doc/ChangeLog:

	Record tag version: V01-01-14

2006-04-20 11:43  Nick West <n.west1@physics.oxford.ac.uk>

	* UserManualDoc/src/UserManual.tex:

	Prepare for release R1.22

2006-04-20 11:36  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/doc/ChangeLog:

	Record tag version: V01-06-02

2006-04-20 11:29  Nick West <n.west1@physics.oxford.ac.uk>

	* WebDocs/Companion/overview/macros/loon_reco_job.C:

	StandardNtuple needs TruthHelperNtuple

2006-04-20 11:21  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/doc/ChangeLog:

	Record tag version: V01-10-00

2006-04-20 11:09  Nick West <n.west1@physics.oxford.ac.uk>

	* EventDisplay/EVD.C:

	CandFitTrackSA requires NtpFitSA

2006-04-20 08:59  hartnell

	* MeuCal/: MeuAnalysis.cxx, MeuCuts.cxx, MeuPlots.cxx, MeuReco.cxx,
	  MeuSummaryWriter.cxx, macros/nearValidate/mResponseDrift.C:

	Got rid of DetectorType

2006-04-20 00:37  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* TriD/: GNUmakefile, TridAnimator.cxx, TridAnimator.h,
	  TridCratePage.cxx, TridCratePage.h, TridGLFrame.cxx,
	  TridGLFrame.h, TridHistoPage.h, TridModel.cxx,
	  TridModelMaker.cxx, TridPage.cxx, TridPage.h,
	  TridPageDetector.cxx, TridPageDetector.h, TridPageSlice.h,
	  TridPmtPage.cxx, TridPmtPage.h, TridUVPage.cxx, TridUVPage.h:

	Fix up DetectorType -> Detector (though I don't know why it's changing).
	Fix compile-time warnings about operator=.
	Fix animation time; use default Munits everywhere but user interface.
	Animation now works well.
	Change to yet another printing scheme; this one works at the OpenGL level and simply dumps the data to a file, then uses the ImageMagick "convert" to change it.

2006-04-20 00:17  culling

	* RecoBase/CandShowerHandle.h:

	Added DeDx method to account for muon energy in trk chg removal for CC shws

2006-04-20 00:16  culling

	* RecoBase/CandShowerHandle.cxx:

	Added DeDx method and edited CalibrateEnergy to account for muon energy in trk chg removal from CC shws

2006-04-19 23:28  George Irwin <gmieg@slac.stanford.edu>

	* setup/: setup_minossoft_lawin.csh, setup_minossoft_lawin.sh:

	Update lawin configuration.

2006-04-19 21:30  Brett Viren <bv@bnl.gov>

	* CVSROOT/check_access:

	Add Andy to RecoBase

2006-04-19 20:58  Robert Hatcher <rhatcher@fnal.gov>

	* BeamDataDbi/: BMFileSummaryFiller.cxx, BMSpillFiller.cxx,
	  BeamMonSwicPedsDbuModule.cxx:

	convert DetectorType:: to Detector:: everywhere.

2006-04-19 20:36  Robert Hatcher <rhatcher@fnal.gov>

	* TriD/: TestDemuxModule.cxx, TridCratePage.cxx, TridModel.cxx,
	  TridModel.h, TridModelMaker.cxx, TridModelStrip.cxx,
	  TridModelStrip.h, TridPageDetector.cxx, TridPageSlice.cxx,
	  TridPmtPage.cxx, TridUVPage.cxx:

	convert DetectorType:: to Detector:: everywhere.

2006-04-19 20:34  Robert Hatcher <rhatcher@fnal.gov>

	* TriD/stat/GNUmakefile:

	StandardNtuple now depends on TruthHelperNtuple library-wise.

2006-04-19 20:00  Robert Hatcher <rhatcher@fnal.gov>

	* PulserCalibration/: MakeLin.cxx, Plotter.cxx, PulserDriftPin.cxx,
	  PulserFromRawFilterModule.cxx, PulserFromRawModule.cxx,
	  PulserGainFit.cxx, PulserGainFit.h, PulserGainPin.cxx,
	  PulserRawDriftPin.cxx, PulserRawGainPin.cxx,
	  PulserRefDriftPin.cxx, PulserSummaryList.cxx,
	  PulserTimeDrift.cxx, PulserTimePlotter.cxx, ndQuadFit.C:

	convert DetectorType:: to Detector:: everywhere.

2006-04-19 19:59  vahle

	* NueAna/: macros/MakeAnaNueTree.C, scripts/qsubLotsNueTreesRAL.sh:

	Mistyped NueBeamMon configuration string name in MakeAnaNueTree macro

2006-04-19 19:57  Robert Hatcher <rhatcher@fnal.gov>

	* PulserCalibration/: PmtDrift/PhotonStatSummarizer.cxx,
	  PmtDrift/Summarizer.cxx, PmtDrift/Summarizer.h,
	  PmtDrift/check_pmt_drift.C, PmtDrift/pmt_plot.C,
	  PmtDrift/pmt_plot.cxx, CheckGC/CheckGC.cxx, CheckGC/CheckGC.h,
	  CheckGC/FitGC.cxx, CheckGC/FitGC.h,
	  CheckGC/write_calpulserfits.C:

	convert DetectorType:: to Detector:: everywhere.

2006-04-19 19:56  Robert Hatcher <rhatcher@fnal.gov>

	* PulserCalibration/macros/: make_pulsertimedrift_table.C,
	  write_calpulserfits.C:

	convert from DetectorType:: to Detector:: everywhere.

2006-04-19 19:35  vahle

	* NueAna/: LinkDef.h, MCFluxInfoAna.cxx, NueBeamMonModule.cxx,
	  NueBeamMonModule.h, NuePOT.cxx, NuePOT.h,
	  macros/MakeAnaNueTree.C, scripts/qsubLotsNueTreesRAL.sh:

	Added code to write total pot in a file to another tree in the AnaNue file.  Works on data and MC, but the MC is dependent on hard coded constants that will probably change every mc production round

2006-04-19 19:09  boehm

	* NueAna/macros/MakeAnaNueTree.C:

	Adding the alternative path for using the new flux files when running at fnal

2006-04-19 18:50  Robert Hatcher <rhatcher@fnal.gov>

	* Calibrator/: CalTimeJump.cxx, CalVaLinearity.cxx, Calibrator.cxx,
	  MuonDriftCalScheme.cxx, PEGainCalScheme.cxx,
	  PmtDriftCalScheme.cxx, PulserDriftCalScheme.cxx,
	  PulserLinearityCalScheme.cxx, PulserSigLinCalScheme.cxx,
	  PulserTimeCalScheme.cxx, QuadLinearityCalScheme.cxx,
	  SimpleCalScheme.cxx, StripAttenCalScheme.cxx,
	  TemperatureCalScheme.cxx:

	Change DetectorType:: to Detector:: everywhere.

2006-04-19 17:41  hartnell

	* MeuCal/: MeuPlots.cxx, MeuPlots.h, macros/FileListSpecial.C,
	  macros/meuPlots.C, macros/nearValidate/mLPos.C,
	  macros/nearValidate/mResponseDrift.C:

	Added plots to test drift calibration without having to rerun over the
	ntuples - can do it using MeuSummary objects.

2006-04-19 17:01  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx,
	  NCAnalysisUtils.h:

	redo the FindRecoWeight function to take the shower and track energy by
	reference.  realize that there is an easy way to alter the value of
	the shower and track energy as well.

2006-04-19 16:33  Robert Hatcher <rhatcher@fnal.gov>

	* setup/setup_minossoft_FNALU_parser.sh:

	clarify that the -R <root-version> option is no longer supported (it was
	always a dangerous thing to do).

2006-04-19 15:45  mdier

	* WebDocs/database_inventory/hvdbifromsingles.cfg:

	Description of the hv status database table in development by Alec H.

2006-04-19 15:33  blake

	* CandMorgue/DataQualityModule.cxx:

	suppressing one more debug message...

2006-04-19 15:24  blake

	* CandMorgue/DataQualityModule.cxx:

	suppress some more debug messages...

2006-04-19 15:08  blake

	* Filtration/DataQualityFilter.cxx:

	suppress some debug messages...

2006-04-19 14:55  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/cvs-rep.html:

	commit small uncommitted change that I found at FNAL.

2006-04-19 14:53  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/database_inventory/dbusubrunsummary.cfg:

	commit partial documentation (better than nothing).

2006-04-19 14:47  habig

	* DcsUser/: HvDbiFromSingles.cxx, HvDbiFromSingles.h,
	  HvDbiFromSingles_Example.C, LinkDef.h:

	Add a first pass at DBifying Andy's single's monitoring HV table

2006-04-19 14:46  habig

	* DcsUser/BfldDbiCoilState_Example.C:

	Get rid of useless index getting.

2006-04-19 14:16  Nick West <n.west1@physics.oxford.ac.uk>

	* WebDocs/: SnapshotRel.html, WebDocs.html:

	Document Snapshot Releases

2006-04-19 10:44  Nick West <n.west1@physics.oxford.ac.uk>

	* CandNtupleSR/Module/NtpSRModule.cxx:

	Pedro Ochoa: When writing hit planks in FillNtpShieldStrip subroutine
	now filter them through GetAssociatedPlank method from ShieldGeom
	class in CandShield package. This is to ensure that plank calling is
	not dependent in order of strips in PlexSeidAltL.

2006-04-19 10:19  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/test/DbiValidate.cc:

	If ENV_NO_CLEAN_DB_TEST set, don't clean even if Db preparation fails

2006-04-19 05:39  ochoa

	* CandShield/: ShieldGeom.cxx, ShieldGeom.h:

	Added AssociatedPlank methods to make package more robust, especially when using ORACLE instead of Mysql.

2006-04-19 04:52  Sue Kasahara <schubert@hep.umn.edu>

	* StandardNtuple/macro/readntp.C:

	Macro to test Get methods to be compiled with ACLIC.  Needs clean-up.

2006-04-19 04:50  Sue Kasahara <schubert@hep.umn.edu>

	* StandardNtuple/: NtpStRecord.cxx, NtpStRecord.h:

	Change access method definitions from:
	   const std::vector<const NtpSRStrip *>  GetEventStrips(int event_index) const;   const std::vector<const NtpSRTrack *>  GetEventTracks(int event_index) const;   const std::vector<const NtpSRShower *> GetEventShowers(int event_index) const;

	to:

	   // If event index is negative (default) then return all showers,
	   // tracks or strips in a record
	   std::vector<const NtpSRStrip *>  GetStrips(int event_index = -1) const;
	   std::vector<const NtpSRTrack *>  GetTracks(int event_index = -1) const;
	   std::vector<const NtpSRShower *> GetShowers(int event_index = -1) const;

	and clean up code a bit.

2006-04-19 04:37  zarko

	* BeamMegaFit/DoTheFit.C:

	Number of POTs were not stored correctly.

2006-04-19 00:36  Sue Kasahara <schubert@hep.umn.edu>

	* IoModules/IoInputModule.cxx:

	Add a few Verbose level message statements.

2006-04-18 22:35  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h:

	Backport incompatibility with root 5.10/00 fix to R1.21.

2006-04-18 22:29  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h:

	Backport latest fix to ROOT v5.10/00 incompatibility problem to R1.20.

2006-04-18 22:14  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* PhotonTransport/macros/: mc.C, simple.C:

	Update documentation scripts for the new nonlinearity.

2006-04-18 22:07  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h:

	Backport collision with ROOT v5.10/00 fix to R1.18.

2006-04-18 22:06  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DetSim/SimDetector.cxx:

	Change the default mode for dealing with nonlinearity.
	DetSim now uses the Calibrator to introduce nonlinearity.

	To return to the old mode, do:
	detsim.Set("pmtDoNonlinearity=1")
	detsim.Set("doLookupNonlinearity=0");

2006-04-18 22:04  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/QuadLinearityCalScheme.cxx:

	Add some error messaging.  Fix up error statistics for the case of no table.

2006-04-18 21:47  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h,
	  test/TestRec.cc:

	Modify RecArrayAllocator once again for compatibility with 5.10/00.
	The use of kIsFree = BIT(28) of the TObject::fBits data member did not
	collide with any ROOT use of this bit, however TObject::Set/TestBit(UInt_t f)
	apparently doesn't work out in the bit range 28-31.
	I've now rid the RecArrayAllocator of any use of the TObject::fBits data
	member by using a map to keep track of which TClonesArrays are available.
	This should fix the problem and avoid any future conflict - really!
	  Also modify TestRec validation program to allow a command line option to
	control the verbosity of the log messages:
	usage: TestRec -l<loglevel>
	 -l: loglevel at which to print messages (default=Info).
	     valid arguments are: Verbose, Debug, Synopsis, Info, Warning, Error, Fatal
	 -h: print this message

2006-04-18 17:03  vahle

	* BeamMegaFit/: DoTheFit.C, FitBeam.cxx, FitBeam.h, FitData.h,
	  FitPTRW.cxx, FitPTRW.h, GNUmakefile, LinkDef.h, runaparamfit.C,
	  data/fluka05ptxf.root, data/truehists-reclaim.root:

	Initial commit of Hadron Production Fitting code.  Will make it more configurable in subsequent commits

2006-04-18 16:18  vahle

	* NueAna/scripts/: qsubLotsNueTreesRAL.sh, qsubOneNueTreeRAL.sh,
	  runNueTreesRAL.sh:

	Adding scripts directory and scripts for submitting NueTrees to farm at ral

2006-04-18 16:03  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_offline/: S06-02-02-R1-21.table,
	  S06-02-16-R1-21.table, S06-03-02-R1-21.table,
	  S06-03-02-R1-21.version, S06-03-17-R1-21.table,
	  S06-03-17-R1-21.version, S06-04-15-R1-21.table,
	  S06-04-15-R1-21.version, development.table:

	update (or add) latest tables and version files

2006-04-18 15:48  vahle

	* NueAna/: ANtpAnalysisInfoAna.cxx, ANtpEventInfoAna.cxx,
	  ANtpShowerInfoAna.cxx, ANtpTrackInfoAna.cxx, FracVarAna.cxx,
	  LinkDef.h, MCFluxInfoAna.cxx, MCFluxInfoAna.h,
	  NueFluxWeights.cxx, NueFluxWeights.h, NueFluxWeightsAna.cxx,
	  NueFluxWeightsAna.h, NueModule.cxx, NueModule.h, NueRecord.cxx,
	  NueRecord.h, NueRecordAna.cxx, NueRecordAna.h, ShwfitAna.cxx,
	  macros/MakeAnaNueTree.C:

	Updating NueAna package to include flux information and flux reweighting.  Additionally, I have made a few changes to other code to get rid of memory leaks.  Comprehensive list of changes is as follows:

	MCFluxInfoAna.cxx--new class to fill flux information.  Just makes a copy of NtpMCFluxInfo and writes it to the ana_nue tree

	NueFluxWeights.cxx--new class to hold flux weights.  Has three weights, fluxweight, the weight from hadron production tuning; beamsysweight, the weight from the beam systematics; totbeamweight, the product of the above two.  Also holds the parameters that were used to reweight the flux in variable length arrays.

	NueFluxWeightsAna.cxx--new class to fill NueFluxWeights objects.  Default tuning is to 12 parameter SKZPII fit.  Has methods to change the parameters, but I have not propagated these changes up the chain to be settable in the macro yet.  For the time being if the parameters change, the code will need to be recompiled.

	ANtpAnalysisInfoAna.cxx--delete filla object at end of analyze routine to plug memory leak

	ANtpEventInfoAna.cxx--delete fInfoFiller and ntpManipulator at end of analyze routine to plug memory leak

	ANtpShowerInfoAna.cxx--delete fInfoFiller at end of analyze
	ANtpTrackInfoAna.cxx--delete fInfoFiller at end of analyze

	FracVarAna.cxx--delete display and fneuralNet to plug memory leaks

	NueModule.cxx
	NueRecord.cxx
	NueRecord.h
	NueRecordAna.cxx
	NueRecordAna.h
	added code to all of the above to configure and fill MCFluxInfo and NueFluxWeights

	ShwfitAna.cxx--changed range on TF1::GetMaximumX to avoid fpe that comes in root version 5

	macros/MakeAnaNueTree.C--added configuration information needed to fill flux information and weights.  Added code to figure out which beam and to set the path to the MuPi trees.  If you don't have the MuPi trees, but want to make the ana_nue trees anyways, change FixMuParents=1 to FixMuparents=0 (line 196).  It will complain once that it can't find the tree, but then run without trying to fix the muparent information.

	M LinkDef.h--added new classes

2006-04-18 14:47  blake

	* CandMorgue/DQSpillServer.cxx:

	bug fix: need to initialise the member variables.

2006-04-18 13:21  cpw1

	* Calibrator/: PulserTimeCalScheme.h, PulserTimeCalScheme.cxx:

	Include task number for jumps in configuration

2006-04-18 12:18  Nick West <n.west1@physics.oxford.ac.uk>

	* StandardNtuple/NtpStRecord.cxx:

	Fix typos (index instead of event_index)

2006-04-18 09:58  cpw1

	* PulserCalibration/macros/create_calpulserfits.mysql:

	add keys to vld table

2006-04-18 09:43  cpw1

	* PulserCalibration/PulserTimeDrift.cxx:

	Fix channel index

2006-04-18 09:40  cpw1

	* Calibrator/CalTimeJump.cxx:

	Fix channel index

2006-04-17 21:06  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/macros/systematic.C:

	fix a typo, remove some unnecessary configuration calls

2006-04-17 21:04  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/SystematicModule.cxx:

	fix bug where array index was out of bounds

2006-04-17 20:58  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/macros/systematic.C:

	minor bug fix

2006-04-17 20:52  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/macros/: hessian.C, systematic.C:

	add macros for running HessianModule and SystematicModule

2006-04-17 20:28  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianModule.h,
	  SystematicModule.cxx, SystematicModule.h:

	remove some unnecessary data members from HessianModule.  add a couple to
	SystematicModule

2006-04-17 19:47  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianModule.h, LinkDef.h,
	  SystematicModule.cxx, SystematicModule.h:

	add the module that calls SystematicParameter for each of the sources
	of uncertainty.  also make cosmetic changes to HessianModule while i am at it.

2006-04-17 14:43  boehm

	* NueAna/macros/: MakeAnaNueTree.C, MakeTrimmedAna.C:

	After some changes made in StandardNtuples it is important that

	gSystem->Load("libTruthHelperNtuple.so");

	preceeds the loading of the StandardNtuple library.

2006-04-17 07:40  Nick West <n.west1@physics.oxford.ac.uk>

	* setup/packages-S06-04-15-R1-21:

	SoftRelTools version is HEAD not S06-04-15-R1-21

2006-04-17 05:37  Nick West <n.west1@physics.oxford.ac.uk>

	* WebDocs/Companion/coding_convention/: hot_list.html, index.html:

	Add rule about not using generic names

2006-04-17 02:45  rustem

	* StandardNtuple/NtpStRecord.cxx:

	Add few more consistency checks. Hopefully, any calls with an invalid index or calls that fail to
	find data which is expected to exist should produce a warning: if evt does not exist, then it is an
	error but if trk does not exist this just could mean that there are no tracks in all events in this
	record. Failures to find MC truth information only produce kDebug messages.

2006-04-17 02:16  rustem

	* StandardNtuple/: NtpStRecord.cxx, NtpStRecord.h:

	First pass at access functions that help to extract events and other info from a record. The code
	is self documenting and it should be clear how to use these functions from a header file alone. No
	new data members are added and old ones are not modified so there is no need to change version
	number.

2006-04-16 02:10  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h:

	Backport bit usage fix to R1-20 so that R1-20 will be compatible with
	ROOT version 5.10/00.

2006-04-16 02:04  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h:

	Backport bit usage fix to R1-21 so that R1-21 will be compatible with
	ROOT version 5.10/00.

2006-04-16 01:36  Sue Kasahara <schubert@hep.umn.edu>

	* setup/packages-S06-04-15-R1-21:

	First commit

2006-04-16 00:13  Sue Kasahara <schubert@hep.umn.edu>

	* Record/: RecArrayAllocator.cxx, RecArrayAllocator.h:

	Change kIsFree once again from BIT(24) to BIT(28) to avoid collision with
	TObject use of bits in range 24-27.  RecArrayAllocator will now print fatal
	message and abort if it recognizes (tests TClonesArray bits on creation) that
	it has collided with ROOT use of fBits, but it won't catch collision of use
	of it occurs after TClonesArray ctor.

2006-04-15 18:10  tjyang

	* NueAna/Display/NueDisplayModule.cxx:

	reset histogram maximum/minimum to fix a problem seen after switching to root5

2006-04-15 15:09  habig

	* DcsUser/: BfldDbiCoilStateHelpers.cxx, BfldDbiCoilStateHelpers.h,
	  BfldDbiCoilState_Example.C, CoilTools.cxx, CoilTools.h,
	  LinkDef.h, ManualGaps.C:

	Move all the helpers into CoilTools class.

2006-04-15 04:28  zarko

	* MCReweight/Zbeam.cxx:

	Last commit contained one unintendend change, so this is correcting for that.

2006-04-14 23:36  habig

	* DcsUser/: BfldDbiCoilStateHelpers.cxx, BfldDbiCoilStateHelpers.h:

	Added helper for field reversal checking.

2006-04-14 23:02  habig

	* DcsUser/CoilTools.cxx:

	Added some message control stuff in preparation for making logs to
	process for manual gaps.

2006-04-14 22:38  habig

	* DcsUser/: BfldDbiCoilStateHelpers.cxx, BfldDbiCoilStateHelpers.h,
	  BfldDbiCoilState_Example.C, CoilTools.cxx, CoilTools.h,
	  LinkDef.h, ManualGaps.C:

	Added detection of reverse field.

	Generalized things to Near Det (untested yet).

2006-04-14 20:03  tjyang

	* MiniBooNEAna/CountPot.cxx:

	fix a bug found by Simona

2006-04-14 20:01  tjyang

	* MiniBooNEAna/CountPot.cxx:

	forgot to include TFile.h

2006-04-14 19:02  habig

	* DcsUser/: BfldDbiCoilStateHelpers.h, CoilTools.cxx, CoilTools.h,
	  LinkDef.h:

	Moved distillation code to DcsUser instead of the loon script, to enable
	its use by the regular DCS database stuffer.

2006-04-14 14:28  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianParameter.cxx,
	  HessianParameter.h, LinkDef.h, MqfType.h,
	  SystematicParameter.cxx, SystematicParameter.h:

	remove unnecessary stuff from the HessianParameter and HessianModule classes.

	add a new class, SystematicParameter to do the systematic uncertainty
	analysis.  this class makes a bunch of histograms for each systematic
	uncertainty for the near and far detectors that can be fit by different
	fitting algorithms.

2006-04-14 02:37  zarko

	* MCReweight/Zfluk.cxx:

	Zfluk now looks into SRT_PUBLIC_CONTEXT if the data cannot be found in SRT_PRIVATE_CONTEXT

2006-04-14 02:36  zarko

	* MCReweight/Zbeam.cxx:

	Zbeam now looks into SRT_PUBLIC_CONTEXT if the data cannot be found in SRT_PRIVATE_CONTEXT

2006-04-13 23:23  arms

	* MCMonitor/MCMonitorHistograms.cxx:

	Add descriptive bin labels for iresonance and iaction plots.

2006-04-13 21:21  zarko

	* MCReweight/data/: err_hadrprod_le010_far.vec,
	  err_hadrprod_le010_farovernear.vec,
	  err_hadrprod_le010_lowint_far.vec,
	  err_hadrprod_le010_lowint_farovernear.vec,
	  err_hadrprod_le010_lowint_near.vec, err_hadrprod_le010_near.vec,
	  err_hadrprod_le010z170i_far.vec,
	  err_hadrprod_le010z170i_farovernear.vec,
	  err_hadrprod_le010z170i_near.vec,
	  err_hadrprod_le010z200i_far.vec,
	  err_hadrprod_le010z200i_farovernear.vec,
	  err_hadrprod_le010z200i_near.vec, err_hadrprod_le100_far.vec,
	  err_hadrprod_le100_farovernear.vec, err_hadrprod_le100_near.vec,
	  err_hadrprod_le250_far.vec, err_hadrprod_le250_farovernear.vec,
	  err_hadrprod_le250_near.vec, err_hadrprod_le_far.vec,
	  err_hadrprod_le_farovernear.vec, err_hadrprod_le_near.vec:

	These error vectors were defined only below 30GeV.
	Modified Files:
	 	err_hadrprod_le010_far.vec err_hadrprod_le010_farovernear.vec
	 	err_hadrprod_le010_lowint_far.vec
	 	err_hadrprod_le010_lowint_farovernear.vec
	 	err_hadrprod_le010_lowint_near.vec err_hadrprod_le010_near.vec
	 	err_hadrprod_le010z170i_far.vec
	 	err_hadrprod_le010z170i_farovernear.vec
	 	err_hadrprod_le010z170i_near.vec
	 	err_hadrprod_le010z200i_far.vec
	 	err_hadrprod_le010z200i_farovernear.vec
	 	err_hadrprod_le010z200i_near.vec err_hadrprod_le100_far.vec
	 	err_hadrprod_le100_farovernear.vec err_hadrprod_le100_near.vec
	 	err_hadrprod_le250_far.vec err_hadrprod_le250_farovernear.vec
	 	err_hadrprod_le250_near.vec err_hadrprod_le_far.vec
	 	err_hadrprod_le_farovernear.vec err_hadrprod_le_near.vec

2006-04-13 18:12  habig

	* DcsUser/: BfldDbiCoilStateHelpers.cxx, BfldDbiCoilStateHelpers.h,
	  BfldDbiCoilState_Example.C, LinkDef.h, ManualGaps.C:

	Added some helper functions for the coil state DB access.

	Added the script for manually filling the gaps found by the distiller.

2006-04-13 15:50  Robert Hatcher <rhatcher@fnal.gov>

	* DatabaseUpdater/: DbuRunSummary.cxx, DbuRunSummary.h:

	new static string DbuRunSummary::kUnfilled.

2006-04-13 15:47  Robert Hatcher <rhatcher@fnal.gov>

	* DatabaseUpdater/DbuDaqFileModule.cxx:

	If fAuxConfigText is the special string DbuRunSummary::kUnfilled
	when it is time to write it, clear it first.

2006-04-13 15:43  Robert Hatcher <rhatcher@fnal.gov>

	* DatabaseUpdater/: DbuDaqMonitorModule.cxx, DbuDaqMonitorModule.h:

	Add CheckForRowCounterColumn() method; explicitly set ROW_COUNTER column
	value when writing data.  Change COMMENT references to RUN_COMMENT.

2006-04-13 15:25  Robert Hatcher <rhatcher@fnal.gov>

	* DatabaseUpdater/DbuSubRunSummary.cxx:

	Take note of addition of ROW_COUNTER and change of COMMENT to RUN_COMMENT

2006-04-13 14:41  vahle

	* FDSpecWErrs/RunFDSpecConfig.C:

	Changed RunFDSpecConfig.C macro so it looks for hadronerror files in $SRT_PUBLIC_CONTEXT/FDSpecWErrs/data

2006-04-13 14:29  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: ComparisonPlotModule.cxx,
	  DataQualityModule.cxx, DataQualityModule.h, RecoMonitoringNC.cxx,
	  RecoMonitoringNC.h, macros/dataQualityCheck.C:

	make changes to allow selection of fiducial volume algorithm with beam events

2006-04-13 14:25  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MarquardtFitModule.h:

	commit changes for making the contour plots

2006-04-13 14:24  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h, NCType.h:

	add in a method for picking out rock muons instead of contained events

2006-04-13 14:14  vahle

	* FDSpecWErrs/data/: err_hadronprod_all_farovernear.vec,
	  toterr_farovernear_le10.vec:

	Adding files that FDSpec needs for historical reasons

2006-04-13 13:43  vahle

	* FDSpecWErrs/: FDSpecWErrs.cxx, FDSpecWErrs.h, reallyrunConfig.C:

	Commented out all references to mysteryweights that was needed for systematic mdc

2006-04-13 13:06  vahle

	* FDSpecWErrs/FDSpecWErrs.cxx:

	Changed FDSpecWErrs back to using SKZPII after tests with SKZPI

2006-04-13 12:16  cbs

	* CandSubShowerSR/SubShowerSRListModule.cxx:

	Changed line in Module that demanded the tracklist be reconstructed with SR.

2006-04-12 22:21  arms

	* MCMonitor/: MCMonitor.cxx, MCMonitor.h, MCMonitorHistograms.cxx,
	  MCMonitorHistograms.h, mcmon_hist_list.txt:

	Add lots of DigiScintHit plots, almost doubling the number of monitored quantities, and yielding access to additional relevant truth-level quantities. Warning: the digihit code hasn't been tested yet, but previous functionality seems okay.

2006-04-12 19:55  habig

	* DcsUser/: BfldDbiCoilState.cxx, BfldDbiCoilState.h,
	  BfldDbiCoilState_Example.C, CoilStatus.cxx, CoilStatus.h,
	  LinkDef.h:

	Added stuff for the distilled coil table BfldDbiCoilState

2006-04-12 19:32  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/infid.h:

	Supply some missing semicolons.
	Spell "octagon" correctly.
	Tweak beam angle to match beam sheet angle.

2006-04-12 00:06  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/test/: GeoValidate.cc, TestGeo.cc:

	Clean up command line options to allow user to specify detector type
	and simflag.

2006-04-11 23:50  George Irwin <gmieg@slac.stanford.edu>

	* WebDocs/macosx_instructions.txt:

	Modify advice about replacing Hepevt.h for ROOT versions after 6April2006.
	ROOT has fixed Hepevt.h for MacOSX now, and my altered version conflicts
	with ROOT's new one.

2006-04-11 23:01  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoScintMdlVolume.cxx, GeoStripVolume.cxx:

	Change module Al skin color to grey, and strip pstyrene insert color to
	cyan.

2006-04-11 22:56  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: drawF001AVtcoilviewalongbeam.C,
	  drawF001AVtcoilviewalongbeamRaytrace.C,
	  drawF001BVtviewfromabove.C:

	scripts to draw far detector coil region in scint plane from view along beam,
	and coil in scint/steel plane pair viewed from above.

2006-04-11 22:31  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: drawF001PVtcoilviewalongbeam.C,
	  drawF001PVtcoilviewalongbeamRaytrace.C:

	Scripts to draw far detector coil in a steel plane.

2006-04-11 22:20  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: drawN001BUfviewfromabove.C,
	  drawN001PUfcoilviewalongbeam.C,
	  drawN001PUfcoilviewalongbeamRaytrace.C:

	Scripts to draw coil implementation in near detector steel.

2006-04-11 22:05  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MarquardtFitModule.h,
	  MqfBeamInfo.cxx, MqfType.cxx, MqfType.h,
	  NumRec/MinosMinimization.cxx, macros/marquardtFit.C:

	set the condition for the fitter to stop to be a difference in chi^2 < 0.01

	few other changes to make things look better in plots

2006-04-11 21:55  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: drawN001AUfcoilviewalongbeam.C,
	  drawN001AUfcoilviewalongbeamRaytrace.C,
	  drawN002AVpcoilviewalongbeamRaytrace.C:

	scripts to draw near detector coil from view along the beam for full
	coverage plane w and w/o raytrace, and for partial coverage plane w/raytrace.

2006-04-11 21:50  Mayly Sanchez <msanchez@tuhepi.phy.tufts.edu>

	* NueAna/: Trimmer.cxx, Trimmer.h, macros/MakeTrimmedAna.C:

	Modifications for pre-selection cuts to Trimmer, this will be replaced by Josh's cuts class.

2006-04-11 20:24  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/drawN002AVpcoilviewalongbeam.C:

	// Script for drawing the coil region of a near detector partial
	// coverage V-view scint plane from a view looking along the beam direction.

2006-04-11 20:10  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/drawN002BVpviewfromabove.C:

	Script for drawing near detector partial coverage V-view plane pair
	(scint, steel, airgaps & coil) from a view looking down at the detector
	from above.

2006-04-11 20:00  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/drawN001BUfviewfromabove.C:

	Script for drawing near detector full coverage U-view plane pair
	(scint, steel, airgaps & coil) from a view looking down at the detector
	from above.

2006-04-11 19:36  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:

	Add some comments to the material definitions.

2006-04-11 12:13  vahle

	* FDSpecWErrs/README:

	Running instructions

2006-04-11 12:13  vahle

	* FDSpecWErrs/fitcode/generate11x_batch.C:

	other code for systematics

2006-04-11 11:38  vahle

	* FDSpecWErrs/fitcode/: makemulti, multi.C:

	Added code to make oscillated histograms for systematic studies

2006-04-11 11:36  vahle

	* FDSpecWErrs/: FDSpecWErrs.cxx, FDSpecWErrs.h, RunFDSpecConfig.C,
	  RunFDSpecSystMockData.C, qsubsysterrs.sh, reallyrunConfig.C,
	  reallyrunSystMDC.C, fitcode/MakePrettyFinalResults.C,
	  fitcode/MakePrettyFinalResults_C.d, fitcode/test_gen_mncont,
	  fitcode/test_gen_mncont.C:

	Added new systematics to FDSpecWErrs and updated associated macros

2006-04-11 05:24  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/DbiWriter.tpl:

	BFLDDBICOILSTATE does not need a log entry.  Fix bug testing SPILLTIMEND that also needs no entry

2006-04-11 05:09  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/scripts/cs_set_refresh_intervals.pm:

	Add BFLDDBICOILSTATE

2006-04-11 02:36  jpochoa

	* NuBarPID/: GNUmakefile, LinkDef.h, LoadPDF.cxx, LoadPDF.h,
	  PIDCalculator.cxx, PIDCalculator.h:

	1st version of NuBarPID

2006-04-11 02:17  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/check_access:

	fix misspelling of jochoa to jpochoa.

2006-04-11 01:02  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	start NuBarPID package for Pedro Ochoa

2006-04-11 00:59  Robert Hatcher <rhatcher@fnal.gov>

	* NuBarPID/.cvsignore:

	Initial revision

2006-04-11 00:59  Robert Hatcher <rhatcher@fnal.gov>

	* NuBarPID/.cvsignore:

	start NuBarPID for Pedro Ochoa

2006-04-10 17:04  marshall

	* CandTrackCam/: GNUmakefile, HitCam.cxx, HitCam.h, LinkDef.h,
	  TrackCam.cxx, TrackCam.h, TrackCamListModule.cxx,
	  TrackCamListModule.h, TrackSegmentCam.cxx, TrackSegmentCam.h:

	A New Track Finding Package.

2006-04-10 17:04  marshall

	* CandTrackCam/example_script.C:

	Example script for using new Track Finding Package with FD Beam MC.

2006-04-10 17:00  marshall

	* CandTrackCam/: AlgTrackCam.cxx, AlgTrackCam.h,
	  AlgTrackCamList.cxx, AlgTrackCamList.h, CandTrackCam.cxx,
	  CandTrackCam.h, CandTrackCamHandle.cxx, CandTrackCamHandle.h,
	  CandTrackCamList.cxx, CandTrackCamList.h,
	  CandTrackCamListHandle.cxx, CandTrackCamListHandle.h,
	  ClusterCam.cxx, ClusterCam.h:

	A New Track Finding Package.

2006-04-10 16:59  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/Calibrator.cxx:

	Make Justin's muon drift the hardwired default.

2006-04-10 16:58  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/QuadLinearityCalScheme.cxx:

	Expand on the "this is not ND data" message. Make it MAXMSG'ed.

2006-04-10 16:56  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/PulserLinearityCalScheme.cxx:

	Change a lot of error messages from MSG to MAXMSG to cut down on verbiage.

2006-04-10 16:47  boehm

	* WebDocs/: WebDocs.html, BatchDocs/Calibration.html,
	  BatchDocs/CandChop.html, BatchDocs/CandEvent.html,
	  BatchDocs/CandFitTrackCam.html, BatchDocs/FilterDigit.html,
	  BatchDocs/Input.html, BatchDocs/Output.html,
	  BatchDocs/PreCedarTestScripts.html, BatchDocs/ProdNames.html,
	  BatchDocs/Release1-18-2.html, BatchDocs/Release1-18.html,
	  BatchDocs/ReleaseNotes.html, BatchDocs/ScriptDesign.html,
	  BatchDocs/ScriptTypes.html, BatchDocs/index.html,
	  BatchDocs/Templates/menu.dwt:

	Modifying some of the new batch pages and adding links to the documentation into the Main WebDocs page

2006-04-10 16:28  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx:

	add more mc information in the ntuple

2006-04-10 16:25  cbs

	* CandEventSR/AlgEventSSList.cxx:

	Updated the shower/track z vertex match criterion used during event building
	to determine whether a shower is at the vertex. U and V beg planes are now
	compared independently and if either matches to better than pShwTrkDz/2
	(see DBtxt file), then the shower is considered to be a vertex shower.

2006-04-10 16:17  cbs

	* CandShowerSR/: AlgShowerSS.cxx, AlgShowerSSList.cxx,
	  CandShowerSRHandle.cxx:

	AlgShowerSS: Added a sanity check to U/V vertex determination - check average
	ph weighted transverse position of shower and compare to:
	1) ph weighted tpos in the vertex plane
	2) vertex determined by largest subshower
	If 1) & 2) disagree by more than 50cm use average tpos for whole shower
	to decide which one to use.
	AlgShowerSSList: The algorithm attempts to match up U/V views using transverse
	ph structure. In the case that there is a U/V mismatch in number of expected
	showers, the lowest ph subshowers may not be included in shower formation.
	This has now been fixed - transverse ph regions are merged until U and V
	expect the same number of showers.
	CandShowerSRHandle: Updated the function to match showers with other
	showers in a during event building (BelongsWithShower). Looser timing
	criteria for matching neutron showers with vertex showers have been
	introduced.

2006-04-10 14:40  Brett Viren <bv@bnl.gov>

	* CandTrackCam/.cvsignore:

	Initial revision

2006-04-10 14:40  Brett Viren <bv@bnl.gov>

	* CandTrackCam/.cvsignore:

	new package

2006-04-10 14:14  Brett Viren <bv@bnl.gov>

	* CVSROOT/: check_access, modules:

	Setup for John Marshall's new  CandTrackCam

2006-04-10 09:37  Nick West <n.west1@physics.oxford.ac.uk>

	* UserManualDoc/src/database_interface.tex:

	Document correctly how to generalise Extended Context queries including those w/o a where condition

2006-04-09 16:48  evansj

	* Calibrator/MuonDriftCalScheme.cxx:

	Removing another cout debugging statement.

2006-04-09 16:46  evansj

	* Calibrator/MuonDriftCalScheme.cxx:

	Removing a cout debugging statement.

2006-04-09 16:38  evansj

	* Calibrator/MuonDriftCalScheme.cxx:

	Updating the DoReset() method to include the version shear factor.
	Now all drift correction factors are corrected to be consistent with R1_18 reconstruction.

2006-04-07 22:07  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Registry/RegistryItemXxx.cxx:

	Fix up #define to cover GCC>=4 as well as GCC>3.3

2006-04-07 22:04  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* MessageService/MsgService.cxx:

	One more semicolon survived the hunt.

2006-04-07 22:02  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* JobControl/JobCFloatXImp.cxx:

	Turn off the MacOSX ppc floating point exception code if we're running on an intel box.

2006-04-07 22:02  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* PulserCalibration/: PulserGainFit.cxx, PulserTimeDrift.cxx:

	Add <math.h> to make gcc 4.0 happy

2006-04-07 22:01  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/CalLinearity.cxx, Calibrator/MuonDriftCalScheme.cxx,
	  Calibrator/PmtDriftCalScheme.cxx,
	  Calibrator/PulserLinearityCalScheme.cxx,
	  Validity/VldTimeStamp.cxx:

	Add <math.h> to make gcc 4.0 happy.

2006-04-07 18:29  boehm

	* JobControl/: JobCModule.cxx, JobCPath.cxx, JobCPathModule.cxx:

	Minor changes regarding Message Service in JobControl:

	1) All of the calls to Report (node and path) now write under the stream
	JobCReport instead of JobC, if it is ever necessary to surpress JobC Info or Warnings the Reports will still be seen.

	2) Everytime a warning is sent from a package it is not necessary to have JobControl report that a warning was sent from the package as the package should always track that itself.  This warning was removed

2006-04-07 18:23  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Candidate/CandBase.h:

	Fix so that it compiles on gcc4.0 on macosx
	(i.e. fix Intel macs so they compile).  Compilation tested on intel mac and ppc mac.

2006-04-07 18:15  kordosky

	* CandDigit/: CandDeMuxDigit.h, CandDeMuxDigitList.h, CandDigit.h,
	  CandDigitList.h:

	class XXX" declaration or include anotherheader.  without the includes the code does not compile under gcc 4.0.2. Have checked that the changes compile under gcc 3.2

2006-04-07 18:03  kordosky

	* UgliGeometry/: UgliPlnNode.h, UgliStripHandle.h, UgliStripNode.h:

	headers modified to add an additional "class XXX" declaration or include another header.  without the includes the code does not compile under gcc 4.0.2. Actually, from a cursory look at the code I do not understand how it compiles anyway since, for example, the previous version of UgliPlnNode.h refers to an UgliGeometry* but never declares what UgliGeometry is. Hmmmm. Have checked that the changes compile under gcc 3.2

2006-04-07 17:32  kordosky

	* GeoGeometry/GeoShield.h:

	add
	class GeoGeometry;
	which is apparently wanted by gcc4, in addition to the existing

	friend class GeoGeometry;

2006-04-07 17:06  kordosky

	* MessageService/: MsgFileOStream.h, MsgFormat.h:

	add #elif __GNUC__ == 4 clause to support definition of fmtflags and openmode under gcc v4 .

2006-04-07 16:58  evansj

	* Calibrator/: CalDrift.cxx, CalDrift.h, MuonDriftCalScheme.cxx,
	  MuonDriftCalScheme.h:

	Adding a RecoVersion flag to CalDrift.
	Minor change to a warning message in MuonDriftCalScheme.
	Making CalDrift copy constructor public for now (will change back at some point).

2006-04-07 16:33  cpw1

	* Calibrator/PulserLinearityCalScheme.cxx:

	Remove debug cout statement

2006-04-07 16:28  evansj

	* Contrib/evans/ScintCal/ScintCalTimePeriod.h:

	Minor changes to make drift code more readable.

2006-04-07 14:35  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx:

	make sure to check that the beam is good in IsGoodBeamSnarlBR

	use the right weights for the 15 parameter fit to mock data

2006-04-07 10:47  marshall

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	Small changes and improvements to ND spectrometer DeMuxing.

2006-04-06 22:43  cbs

	* CandEventSR/EventSRListModule.cxx:

	Fix to check for empty, as well as null, slicelist in EventSRListModule
	before event list is made. This was causing seg faults in AlgEventSSList:
	empty slicelists are caught by track and shower modules, so track- and
	showerlists were not being made. However the event algs are not checking
	thoroughly for null lists.

2006-04-06 22:01  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: ComparisonPlotModule.cxx,
	  ComparisonPlotModule.h:

	module to draw comparisons between different time periods of data running.

2006-04-06 22:00  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: BeamMonitoring.cxx,
	  DataQualityModule.cxx, DataQualityModule.h, DataTimeUnit.cxx,
	  DataTimeUnit.h, DirectCompareModule.cxx, DqmType.h,
	  EfficiencyPurityModule.cxx, EventRatePlotModule.cxx, LinkDef.h,
	  RecoMonitoring.cxx, RecoMonitoring.h, RecoMonitoringCR.cxx,
	  RecoMonitoringCR.h, RecoMonitoringNC.cxx, RecoMonitoringNC.h,
	  macros/dataQualityCheck.C:

	restructure the way the data is handled.  now RecoMonitoring ctr takes a
	range of times in julian dates.  RecoMonitoringNC(CR) know how to fill them
	selves using a chain, rather than being filled externally.  this allows me
	to make a different object for each period of time i want to monitor, and
	not have too much data to read in for any one period of time.

	RecoMonitoringNC now has BeamMonitoring as a data member.

	removed a lot of parameters from DataQualityModule as they are no longer
	needed in the new scheme.

2006-04-06 17:59  kreymer

	* setup/msrt:

	changed obsolete node srtcvs to cdcvs

2006-04-06 17:57  kreymer

	* CVSROOT/check_access:

	added kreymer to core_grp

2006-04-06 17:07  arms

	* MCMonitor/: MCMonitor.cxx, MCMonitor.h, MCMonitorHistograms.cxx,
	  MCMonitorHistograms.h, mcmon_hist_list.txt,
	  macro/makeMCMonitorPlots.C, macro/outputMCMonitorPlots.C:

	Several upgrades:

	- Add truth PhotonTransport & DetSim plots as
	  well as Reco Strip & Shower plots.
	- Add an additional possible setting to only
	  write out truth CC/NC event quantities and
	  modify makeMCMonitorPlots macro with
	  commented-out line to adjust this setting.
	- Modify the output macro to handle any number
	  of additional plots (expand the index page to
	  multiple pages as necessary).

2006-04-06 14:58  kreymer

	* WebDocs/readmeroot:

	corrected gauranteed typo

2006-04-06 06:21  Nick West <n.west1@physics.oxford.ac.uk>

	* CVSROOT/check_access:

	perl is now in /usr/bin not /usr/local/bin

2006-04-06 06:18  Nick West <n.west1@physics.oxford.ac.uk>

	* WebDocs/Errors/running.html:

	Add Re-initialization enforced macro G__CINTVERSION FILE

2006-04-05 04:42  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/scripts/cs_set_refresh_intervals.pm:

	Add CALPULSERFITS

2006-04-05 03:15  Sue Kasahara <schubert@hep.umn.edu>

	* Record/RecArrayAllocator.h:

	Modify kIsFree bit used to keep track of which TClonesArrays are free for reuse
	from bit 14 to bit 24 to avoid collision with root use:
	      // From TObject.h: "Bits 0-13 are reserved as global bits. Bits 14-23
	      // can be used in different class hierarchies."
	      // Bit 24 as used here should be safely out of ROOT use range.
	      kIsFree = BIT(24)  // indicates TClonesArray is available for reuse

2006-04-04 22:13  mdier

	* NueAna/ANtpShowerInfoAna.cxx:

	Determine the primary shower as the shower with the largest ph within 0.5m of the primary track vertex, if any track is present. Otherwise just take the shower with the largest ph. The primary track is determined in the same way as in ANtpTrackInfoAna.

2006-04-04 19:22  cbs

	* MCReweight/MuParentHelper.cxx:

	Muon parent PID now returned to be a PDG code rather than a GEANT code.

2006-04-04 15:57  cbs

	* MCReweight/LinkDef.h:

	Updated Linkdef.h file

2006-04-04 15:56  cbs

	* MCReweight/: MuParentHelper.cxx, MuParentHelper.h:

	First pass code for getting pion parent info based on muon parent info in
	the sntp files. Requires a new set of trees made from the flux files with
	the macro: MCReweight/macros/muonInfo.C

2006-04-04 14:01  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataTimeUnit.cxx, DataTimeUnit.h:

	add more guts to the new object

2006-04-04 00:03  arms

	* MCMonitor/MCMonitorHistograms.h:

	[no log message]

2006-04-03 22:18  niki

	* Contrib/niki/beam_matrix/matrix_fit.C:

	[no log message]

2006-04-03 22:04  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataQualityModule.cxx, DataTimeUnit.cxx,
	  DataTimeUnit.h, EfficiencyPurityModule.cxx,
	  EfficiencyPurityModule.h, EventRatePlotModule.cxx, LinkDef.h,
	  macros/dataQualityCheck.C:

	make a new object to hold the data for a given unit of time.

	make various other changes for bugs, etc

2006-04-03 21:59  niki

	* Contrib/niki/beam_matrix/matrix_fit.C:

	fit

2006-04-03 20:59  niki

	* Contrib/niki/beam_matrix/Beam_ref_fin_neut.C:

	oops previous was without  skzpIII...

2006-04-03 20:41  boehm

	* NueAna/: Trimmer.cxx, Trimmer.h, macros/MakeTrimmedAna.C:

	Modification to the trimmer to allow for beam cuts and to reweight based on the oscillation probability

2006-04-03 18:05  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx:

	dont do the beam spot correction for mock data, do it for real data only.

2006-04-03 15:20  admarino

	* Contrib/admarino/ncbkg_doc/Data_MC_weighting_effect.eps:

	First version of plot from Andy

2006-04-03 15:20  admarino

	* Contrib/admarino/ncbkg_doc/: CCshw_NC_bckgrnd.eps,
	  CCshw_NC_pid_vars.eps, CCshw_NC_prob_E.eps,
	  CCshw_data_bckgrnd.eps, CCshw_data_pid.eps, CCshws_NCbkg.tex,
	  CCshws_data_mc_01.eps, CCshws_data_mc_12.eps,
	  CCshws_data_mc_1230.eps, CCshws_data_mc_24.eps,
	  CCshws_data_mc_46.eps, CCshws_data_mc_612.eps,
	  CCshws_data_mc_overall.eps:

	Adding the plots and text from Andy Culling.

2006-04-03 14:11  cpw1

	* Calibrator/: PulserLinearityCalScheme.h,
	  PulserLinearityCalScheme.cxx:

	Add DecalLinFar

2006-04-01 23:55  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/infid.h:

	first try at common macro for definitions of fiducial volume cuts.

2006-04-01 20:51  asousa

	* Contrib/admarino/tufts/: gminos_jobs.pm, run_near.perl,
	  run_rock.perl:

	Updating scripts to be used in Tufts MC generation.

2006-04-01 14:39  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Filtration/Blinder.cxx:

	Add a new blinding epoch starting April 15th.
	Data taken after that date will be blinded with a different function than data
	taken before that date.

	---Nathaniel

2006-04-01 05:08  George Irwin <gmieg@slac.stanford.edu>

	* CVSROOT/check_access:

	Give Caius general commit privilege.

2006-03-31 16:04  cbs

	* NueAna/macros/SetAnaNueAlias.C:

	Helper function to set short alias names for the AnaNue tree branches.

2006-03-30 18:27  avva

	* Contrib/sergei/ProcessFitSA/: FitHists.h, PlotFitSA.C:

	Added histogram of SA/SR ratio of (Prange/Pfit)data/(Prange/Pfit)mc double ratios.

2006-03-30 17:31  chapman

	* AtNuOutput/NtpMaker.cxx:

	Hmm Should actually compile now...
	(This version is really just a stop gap so the package builds until we're ready to commit the version being
	destruction tested at Cambridge.)

2006-03-30 17:25  chapman

	* AtNuOutput/NtpMaker.cxx:

	Change a couple of lines so that the code should compile with latest version of AtNuReco / RecoBase

2006-03-30 17:08  ishi

	* Contrib/ishi/CCAnalysis/: fast_fit_fd.C, fast_fit_fd.h,
	  fast_fit_ndfd.C, fast_fit_ndfd.h:

	Code used for W&C.

2006-03-29 22:53  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	fix a typo - it does beg the question as to how we were reweighting for
	MODBYRS3....perhaps that is the default in MCReweight now...

2006-03-29 20:38  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	add in the spot size for Zbeam

2006-03-29 20:29  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	make the beamType parameter what is actually passed to Zbeam.  user has
	to be careful that s/he is using Zarko's conventions now

2006-03-29 12:41  cpw1

	* Calibrator/: CalPulserFits.cxx, PulserLinearityCalScheme.h,
	  PulserLinearityCalScheme.cxx:

	Mods for 60-point gain curve

2006-03-29 11:25  cpw1

	* PulserCalibration/macros/write_calpulserfits.C:

	Updates for 60-point gain curve

2006-03-29 11:21  cpw1

	* PulserCalibration/: PulserGainFit.h, PulserGainFit.cxx:

	Updates for 60-point gain curve

2006-03-28 23:55  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx, NCType.h:

	fix a typo.

	add a line to the FindRecoWeight method to return the weight for the
	NC background parameter

2006-03-28 23:47  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianParameter.cxx,
	  MarquardtFitModule.cxx, MqfBeamInfo.cxx, MqfBeamInfo.h,
	  MqfEnergyBinInfo.cxx, MqfEnergyBinInfo.h, MqfType.cxx, MqfType.h,
	  NumRec/MinosMinimization.cxx, NumRec/MinosMinimization.h,
	  macros/marquardtFit.C:

	all sorts of changes to handle things like

	1.  making y distributions for each energy bin
	2.  more reconstruction systematic parameters (nc background, near far
	miscalibration)
	3.  fitting the far detector with a guess from the near

2006-03-28 22:22  boehm

	* WebDocs/BatchDocs/: Calibration.html, CandChop.html,
	  CandEvent.html, FilterDigit.html, Input.html, Output.html,
	  PreCedarTestScripts.html, ProdNames.html, Release1-18-2.html,
	  Release1-18.html, ReleaseNotes.html, ScriptDesign.html,
	  ScriptTypes.html, index.html, styles.css, Templates/menu.dwt,
	  images/MinosBatch.jpg, images/MinosTrans.gif,
	  images/batchBanner.jpg, images/hdrosc.jpg, images/logo.psd,
	  images/mainbg.gif:

	Adding general Batch Documentation into its hopefully permanent home in WebDocs

2006-03-28 21:36  Liz Buckley-Geer <buckley@fnal.gov>

	* CVSROOT/check_access:

	Add boehm to WebDocs

2006-03-28 17:14  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx,
	  NCAnalysisUtils.h:

	take the beamInfo->protonIntensity < 0.5 back out - i think it is redundant
	the cuts from the BMSpillAna

	add in a flag to select the MEGA (or whatever you want to call it) weight
	for either data or the 1700 series MDC.  put in the default values based
	on which you are using.

2006-03-28 17:06  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	add BeamMegaFit package for vahle (+zarko).

2006-03-28 17:03  Robert Hatcher <rhatcher@fnal.gov>

	* BeamMegaFit/.cvsignore:

	Initial revision

2006-03-28 17:03  Robert Hatcher <rhatcher@fnal.gov>

	* BeamMegaFit/.cvsignore:

	start BeamMegaFit package for vahle.

2006-03-28 15:58  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx:

	add code to determine if a track exists the detector

2006-03-28 13:54  blake

	* AtNuReco/: AlgAtNuReco.cxx, AlgAtNuRecoMCTruth.cxx,
	  AlgFitTrackAtNu.cxx, AlgShowerAtNu.cxx, AlgTrackAtNu.cxx,
	  AtNuFindModule.cxx, AtNuFitModule.cxx, AtNuTreeModule.cxx,
	  AtNuTreeModule.h, CandTrackAtNu.cxx, CandTrackAtNu.h,
	  CandTrackAtNuHandle.cxx, CandTrackAtNuHandle.h,
	  DBtxt_AlgFitTrackAtNuList_default.C,
	  DBtxt_AlgShowerAtNuList_default.C, DBtxt_AlgShowerAtNu_default.C,
	  DBtxt_AlgTrackAtNuList_default.C, DBtxt_AlgTrackAtNu_default.C,
	  GNUmakefile, README, TrackSegmentAtNu.cxx, atnureco.C:

	28/3/06
	=======
	(1) Fixed some bugs in AlgAtNuReco.cxx and TrackSegmentAtNu.cxx
	(2) The tracking window across the coil hole is now larger.
	(3) Code uses "Detector" enum rather than "DetectorType".
	(4) Calibrator is used to calculate MIPS for track/shower strips.
	(5) The new timing parameters in RecoBase are now set.
	(6) The track range is now defined from the END of the track
	    in order to be consistent with the SR reconstruction.

2006-03-27 23:54  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* SpillTiming/: SpillTimeFinder.cxx, SpillTimeFinder.h:

	Another STF optimization.

	This one caches the results of the last call. If the next call asks for a similar
	context (i.e. between the Next and Prev spills of the last call) then it just
	returns the same result as before.

	This should largely mitigate the long searches.

2006-03-27 22:56  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* SpillTiming/: SpillTimeFinder.cxx, SpillTimeFinder.h:

	API and code update: optional optimization

	The last major update allowed 'unlimited' searching of database tables to find the next and previous
	spills.  Although correct, this process is extremely slow when the DB is empty (i.e. lots of VLDs but
	no spills) like we get during the shutdown.

	By default, the original behaviour (i.e. the right answer) is done.

	Optionally, the user may call:
	 SpillTimeFinder::Instance().GetTimeOfNearestSpill(cx, 10);
	which will not attempt to search for spills more than 10 seconds
	away from 'cx'.  (The answer returned may be correct if the data is already
	cached; otherwise it will return 1970 or 2037 for 'next' and 'previous' respectively.)

2006-03-27 19:25  niki

	* Contrib/niki/beam_matrix/: Beam_ref_fin_neut.C,
	  fn_extrapolationb_corr.C:

	code

2006-03-27 05:09  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:

	Turn off field in all mediums but FEPL because BField package doesn't
	support field outside of steel planes yet.

2006-03-27 04:49  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoScintPlnVolume.cxx, GeoSteelPlnVolume.cxx:

	Use fixed z-thickness coil volumes instead of multi-volumes for scint
	planes since all scint planes have the same thickness, unlike airgaps
	& steel planes.  This is to try to help performance, since the addition
	of detailed coil has slowed the build-time.  Much optimization still to
	do...

2006-03-27 02:45  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/test/: GeoValidate.cc, GeoValidate.h, TestGeo.cc:

	Add ability to select detector type to validate on command line, e.g.
	  TestGeo -d Calib
	This needs to be cleaned up, later...

2006-03-27 02:37  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoGeometry.cxx, GeoGeometry.h,
	  GeoScintPlnVolume.cxx:

	Finish implementation of detailed coil geometry by implementing coil
	in air gap regions between scint & steel.  For the far detector, this
	is implemented in the same way as for the far detector scint planes.
	For the near detector, this is implemented in the same way as for the
	near detector full coverage scint planes.
	Fix to GeoScintPlnVolume coil implementation for far detector to
	account for rotation of scintpln by +/- 45 degrees when placed.

2006-03-26 21:23  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoScintPlnVolume.cxx, GeoScintPlnVolume.h,
	  GeoSteelPlnVolume.cxx:

	Include build of detailed coil segment implementation as part of scint
	plane.
	  The thickness in z of the coil segment volumes are set to be -1 when
	defining the shapes, and built as TGeoVolumeMulti volumes.  When placed
	as a node in the scint plane, the volumemulti shape will take on the
	thickness of its parent.
	  As a consequence of the coil segment insertion directly into the scint
	plane, the coil hole cut-out has been removed from the scint plane shapes.
	  Add patches to protect against previous assumption that all daughter
	nodes of scint pln volumes are scint modules.

	New methods:
	1) BuildFarCoilVolume()
	  // Build far scint coil region.  This is built in the following
	  // way, per instruction from R. Hatcher:
	  //   1)Insert a "bypass" (r=Geo::kFarBypassRad) region (not to be confused
	  //     with the bypass plastic insert).  This is constructed of magnetized
	  //     air.
	  //   2)Insert into the "bypass" a "flange" (r=Geo::kFlangeRad) of magnetized
	  //     iron.
	  //   3)Insert into the "flange" a "throat" (r=Geo::kThroatRad) of magnetized
	  //     air.
	  //   4)Insert into the "throat" a "coil segment" (r=Geo::kCoilRad) of
	  //     magnetized FARCOIL medium.  The coil segment is set to rest on the
	  //     throat (off-center in y).

	2) BuildNearCoilVolume()
	  // Build near scint coil region for full coverage planes.  This is built
	  // in the following way, per instruction from R. Hatcher:
	  //   1)For full coverage planes, insert a "bypass" tube
	  //     (r=Geo::kNearFullBypassRad) region (not to be confused with the
	  //     bypass plastic insert).  This is constructed of magnetized air,
	  //     else...
	  //     For partial coverage planes, insert a "bypass" box
	  //     (halfx/y = Geo::kNearPartialBypassRad) region.  This is constructed
	  //     of magnetized air.
	  //   2)Insert into the "bypass" a "flange" (box of halfx/y = Geo::kFlangeRad)
	  //     of  magnetized iron.
	  //   3)Insert into the "flange" a "throat" (box of halfx/y = Geo::kThroatRad)
	  //     of  magnetized air.
	  //   4)Insert into the "throat" a "coil segment" (box of halfx/y
	  //     = Geo::kCoilRad) of magnetized aluminum.  The coil segment is set
	  ///    to rest on the throat
	  //   5)Insert into the "coil segment" tubes (r=Geo::kNearCoolRad) of
	  //     magnetized water in an array of 6 columns x 8 rows.

	3) AddCoilNode()
	  // Build scint coil volume and insert it as node in this scint plane.

	Fix comments in GeoSteelPlnVolume.

2006-03-26 19:51  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoScintPlnNode.cxx:

	Test for MdlNode type when looping over scintpln daughters.

2006-03-26 19:43  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoSteelPlnVolume.cxx, GeoSteelPlnVolume.h:

	Include build of detailed coil segment implementation as part of steel plane.
	  The thickness in z of the coil segment volumes are set to be -1 when
	defining the shapes, and built as TGeoMultiVolumes.  When placed as a node
	in the steel plane, the multivolume shape will take on the thickness of
	its parent.  This allows for variable thickness of the steel plane in
	a non-perfect geometry, without the build of a separate coil segment volume
	for every steel plane in the detector.
	  As a consequence of the coil segment insertion directly into the steel
	plane, the use of TGeoCompositeShape is no longer necessary to build the
	steel planes as a TGeoXtru with a TGeoTube coil hole cut-out, and its
	use has been removed.

	New methods:
	1)BuildFarCoilVolume()
	  //
	  // Build far steel "detail coil disk".  This is built in the
	  // following way, per instruction from R. Hatcher:
	  //  1)Insert a "detail disk" (r=Geo::kDetailRad) into the steel plane, made
	  //    of the same material as the plane.  This defines the region
	  //    in which the detailed b-field map is used.
	  //  2)Insert into the "detail disk" a "hole" (r=Geo::kFeHoleRad) of
	  //    magnetized air.
	  //  3)Insert into the "hole" a "neck" (r=Geo::kNeckRad) of magnetized iron.
	  //  4)Insert into the "neck" a "throat" (r=Geo::kThroatRad) made of
	  //    magnetized air.
	  //  5)Insert into the "throat" a "coil" (r=Geo::kCoilRad) of
	  //    magnetized FARCOIL medium.  The coil is set to rest on
	  //    the throat (off-center in y).
	  //

	2)BuildNearCoilVolume()
	  //
	  // Build near steel "detail coil disk".  This is built in the
	  // following way, per instruction from R. Hatcher:
	  //  1)Insert a "detail disk" (r=Geo::kDetailRad) into the steel plane, made
	  //    of the same material as the plane.  This defines the region
	  //    in which the detailed b-field map is used.
	  //  2)Insert into the "detail disk" a "hole" (box of halfx/y
	  //    = Geo::kFeHoleRad) of magnetized air.
	  //  3)Insert into the "hole" a "neck" (box of halfx/y = Geo::kNeckRad) of
	  //    magnetized iron.
	  //  4)Insert into the "neck" a "throat" (box of halfx/y =Geo::kThroatRad)
	  //    made of magnetized air.
	  //  5)Insert into the "throat" a "coil" (box of halfx/y=Geo::kCoilRad) of
	  //    magnetized aluminum.  The coil segment is set to rest on
	  //    the throat.
	  //  6)Insert into the "coil" cooling tubes (r=Geo::kNearCoolRad) of
	  //    magnetized water, arranged in an array of 6 columns x 8 rows.
	  //

	3)AddCoilNode()
	 // Build steel coil volume and insert it as node in this steel plane.

2006-03-26 19:29  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: Geo.h, GeoGeometry.cxx:

	New coil hole parameters to use with detailed coil geometry.  Parameters
	are adopted from: $GMINOSPATH/inc/coil_info.inc.

2006-03-25 20:08  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:

	Add mediums for magnetized aluminum and magnetized water for use
	in simulation of near detector coil.

2006-03-24 20:24  hartnell

	* NtupleUtils/: NuCuts.cxx, NuCuts.h, NuDemoModule.cxx, NuEvent.h,
	  NuReco.cxx:

	One API change.

2006-03-23 23:05  hartnell

	* MeuCal/: MeuAnalysis.cxx, MeuPlots.cxx:

	New plots.

	Change to Recalibrate() method to perform drift+linearity and pe
	calibrations.

2006-03-23 23:04  hartnell

	* MeuCal/macros/: FileListSpecial.C, makeSummaryTree.C:

	Change config to calibrator to allow it to pull in the drift and pe
	calibrations.

2006-03-23 23:03  hartnell

	* MeuCal/macros/nearValidate/mLPos.C:

	Make a blessed plot version

2006-03-23 12:36  weber

	* CandDigit/AlgDigit.cxx:

	Undo Nathaniel's change (see below).

	The crate T0 off-set sub-traction is needed as the counter-reset
	can be held of in the ND, if it occurs during the spill.
	So it does not always occur at the start of the second.

	   Alfons

	========================================
	Wed Mar 22 20:32:10 CST 2006
	Commit to minossoft/CandDigit AlgDigit.cxx by tagg
	Update of /cvs/minoscvs/rep1/minossoft/CandDigit
	In directory minos01.fnal.gov:/var/tmp/cvs-serv5484

	Modified Files:
		AlgDigit.cxx
	Log Message:
	Fix a timing bug, going from raw digits to CandDigits.

	The sub-second NTP time from the ROP was being added to the raw digits. I can
	only assume this comes from some ancient model of how the timing system was
	supposed to work. The CVS log shows this was put in around 2001.

	The timing system at both detectors fixes the sub-second t0 in hardware, not in the data;
	the TDC count is set to be zero at the start of the second (local GPS time). If you have read
	this far into this CVS commit message, you are way too committed.

	---Nathaniel

2006-03-23 12:10  asousa

	* NCUtils/: NCAnalysisReader.cxx, NCAnalysisReader.h,
	  macros/ncccReader.C:

	A few mods to improve functionality.

2006-03-23 04:19  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:

	Steel planes are now made of FEPL, and not IRON.  This is how things
	are done in gminos, but was overlooked until now.  FEPL is slightly
	less dense, and only 90% iron.

2006-03-23 03:38  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:

	Add additional material/medium definitions required by build of
	detailed far detector coil geometry.

2006-03-23 02:53  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GeoGeometry.cxx:

	Set the default values of appropriate TGeoMedium parameters negative
	to make it obvious that these values will be automatically computed
	by Geant3.

2006-03-23 02:32  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* CandDigit/AlgDigit.cxx:

	Fix a timing bug, going from raw digits to CandDigits.

	The sub-second NTP time from the ROP was being added to the raw digits. I can
	only assume this comes from some ancient model of how the timing system was
	supposed to work. The CVS log shows this was put in around 2001.

	The timing system at both detectors fixes the sub-second t0 in hardware, not in the data;
	the TDC count is set to be zero at the start of the second (local GPS time). If you have read
	this far into this CVS commit message, you are way too committed.

	---Nathaniel

2006-03-23 00:56  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gtrak/gtreveroot.F:

	Modify to print warning when primary vertex is outside of MARS volume.

2006-03-22 20:24  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianParameter.cxx,
	  MarquardtFitModule.cxx, MarquardtFitModule.h, MqfBeamInfo.cxx,
	  MqfType.cxx, MqfType.h, macros/marquardtFit.C:

	lots of changes including

	1.  only do the first 75k events in the fid volume when finding hessian
	elements
	2.  add in another couple of parameters to fit
	3.  some formatting of plots
	4.  getting the weighting right for the mc

2006-03-22 20:11  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	add in a method to find the default values of the zbeam weighting

	also add in code to gang some kno parameters together in neugen

2006-03-22 19:52  tjyang

	* MiniBooNEAna/: CountPot.cxx, CountPot.h:

	fix a few bugs, the runtype was not treated correctly

2006-03-22 19:43  asousa

	* NCUtils/macros/: IncVariables.txt, ncccReader.C:

	Example macro to run the NCAnalysisReader code and example of an inclusion
	list of variables.

2006-03-22 19:41  asousa

	* NCUtils/: ClassType.h, LinkDef.h, NCAnalysisReader.cxx,
	  NCAnalysisReader.h:

	Adding new module to read analysis ntuples into output formats used by
	external packages that perform Multivariate Discriminant or decision tree
	analyses. Output format and inclusion or exclusion lists of variables can
	be specified from the job macro. Like NCAnalysisModule, it can use all the
	cuts in NCUtils for event selection.

2006-03-22 16:34  mdier

	* WebDocs/database_inventory/bflddbicoilstate.cfg:

	New cfg file for renamed coil status database table

2006-03-22 00:09  ishi

	* Contrib/ishi/CCAnalysis/fast_fit_ndfd.h:

	Configurations used in the ND fit.

2006-03-21 21:19  kordosky

	* Mad/: MadDpID.cxx, MadMKAnalysis.cxx:

	forgot to commit these!

2006-03-21 12:04  blake

	* Filtration/macros/dataqualityfilter.C:

	an example macro for DataQualityFilter module

2006-03-21 11:58  blake

	* Filtration/: DataQualityFilter.cxx, DataQualityFilter.h:

	DataQualityFilter modified to make output file configurable.

2006-03-21 09:44  cbs

	* Contrib/cbs/PlotOrg/: PlotMaker.cxx, PlotMaker.h:

	Added code for making CC plots with new cuts

2006-03-21 00:00  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gtrak/gekbin.F:

	Modified to protect against taking the log of a number <= 0.  Print
	warning if this protection is used, since it appears that it's redundant
	with a previous check, so it may signal a bug.

2006-03-20 21:47  Robert Hatcher <rhatcher@fnal.gov>

	* setup/setup_minossoft_FNALU_parser.sh:

	Don't rely on gnu extensions to "egrep" use "| head -n".
	Handle snapshot lookup in a more generic fashion.  One can now use
	  -r snapshot      [ -r snapshot-1 ] to get the latest
	  -r snapshot-prev [ -r snapshot-2 ] to get the penultimate
	  -r snapshot-<N>                    to get older versions

2006-03-20 21:25  tjyang

	* NueAna/data/fvann031506.root:

	change the ann structure from 14:12:1 to 14:10:1
	the old structure doesn't seem to be stable

2006-03-20 20:57  Robert Hatcher <rhatcher@fnal.gov>

	* setup/setup_minossoft_FNALU_parser.sh:

	Select flavor based on UPS_FLAVOR_2.  If that isn't set, set it.

2006-03-20 20:29  Robert Hatcher <rhatcher@fnal.gov>

	* Filtration/LinkDef.h:

	Andy's addition of DataQualityInterface and DataQualityLookup classes
	include ClassDef()'s so they need explicit entries in the LinkDef.h.
	For some reason, the reference to them from DataQualityFilter (a JobCModule
	that doesn't have a ClassDef()) also requires it to be explicitly named.

2006-03-20 19:46  ishi

	* Contrib/ishi/CCAnalysis/: fast_fit_ndfd.C, make_table.C:

	Added comments, removed unnecessary lines.

2006-03-20 19:37  avva

	* Filtration/: StopMuFilterModule.cxx, StopMuFinderFar.cxx,
	  StopMuFinderFar.h:

	Made name of the candtrack list configurable in StopMuFilter.

2006-03-20 17:35  admarino

	* WebDocs/WebDocs.html:

	fixed wrong link to Francisco's MC on enstore summary.

2006-03-20 17:09  Mayly Sanchez <msanchez@tuhepi.phy.tufts.edu>

	* NueAna/macros/MakeAnaNueTree.C:

	Small change to dplanecut

2006-03-20 17:06  Mayly Sanchez <msanchez@tuhepi.phy.tufts.edu>

	* NueAna/: Shwfit.cxx, Shwfit.h, ShwfitAna.cxx,
	  macros/MakeAnaNueTree.C:

	Added more phstrip and phplane count variabls. Changed default parameters.

2006-03-20 17:04  marshall

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	More tuning of ND spectrometer DeMuxing.

2006-03-20 16:19  ishi

	* Contrib/ishi/CCAnalysis/: fast_fit_fd.C, fast_fit_fd.h:

	Update: Add norm. error in FD fit.

2006-03-20 15:40  boehm

	* NueAna/: NueBeamMonModule.cxx, NueBeamMonModule.h,
	  macros/MakeAnaNueTree.C:

	Added code to write out POT information during processing as well as minor modification to the MakeAna macro to write out the whole file name for easy tracking.

2006-03-20 13:12  marshall

	* CandFitTrackCam/AlgFitTrackCam.h:

	Tidied the ND DeMuxing code, ensuring that spectrometer hits are associated
	with the true track, not a XTalk track.

2006-03-20 13:12  marshall

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	Tidied the ND DeMuxing code, ensuring that spectrometer hits are associated
	with the true track, not a XTalk track. Also removed DOS end of line tags,
	which crept into v1.21 of AlgFitTrackCam.cxx

2006-03-20 12:09  blake

	* Filtration/: DataQualityFilter.cxx, DataQualityFilter.h,
	  DataQualityInterface.cxx, DataQualityInterface.h,
	  DataQualityLookup.cxx, DataQualityLookup.h:

	My attempt at a global filter module for MINOS data.
	Can be configured to filter out data where the beam
	and/or the detector is known to be in a bad state.

2006-03-20 11:18  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixMethod.cxx,
	  macros/DataDoMM.C, macros/DrawMMOut.C, macros/MakeMMFile_FLUX.C,
	  macros/MakeMMFile_PAN.C, macros/MakeMMFile_SNTP.C:

	Updates

2006-03-20 10:37  asousa

	* StandardNtuple/NtpStRecord.h:

	Incrementing ClassDef to account for the new shield related members.
	Problem reported by Justin.

2006-03-20 06:59  Mayly Sanchez <msanchez@tuhepi.phy.tufts.edu>

	* NueAna/: LinkDef.h, NueRecord.cxx, NueRecord.h, NueRecordAna.cxx,
	  NueRecordAna.h, TreePID.cxx, TreePID.h, TreePIDAna.cxx,
	  TreePIDAna.h, macros/MakeAnaNueTree.C:

	Adding first version of Cut PID.

2006-03-19 18:13  George Irwin <gmieg@slac.stanford.edu>

	* CVSROOT/check_access:

	Add blake to Filtration package.

2006-03-19 17:48  blake

	* FilterDigitSR/: AlgFilterDigitListAB.cxx, AlgFilterDigitListAB.h:

	Digit filter algorithm for Far Detector data
	 Re-applies gap+4/5 plane trigger and removes any hits
	 that are out of time/space with this main body of hits.
	 This version contains better treatment of small events,
	 Light Injection events and beam spills.

2006-03-19 17:37  blake

	* CandMorgue/GNUmakefile:

	[no log message]

2006-03-19 17:24  blake

	* CandMorgue/: AlgDataQuality.cxx, AlgDataQuality.h,
	  AlgDeadChip.cxx, AlgDeadChip.h, CandDataQuality.cxx,
	  CandDataQuality.h, CandDataQualityHandle.cxx,
	  CandDataQualityHandle.h, CandDeadChip.cxx, CandDeadChip.h,
	  CandDeadChipHandle.cxx, CandDeadChipHandle.h,
	  DBtxt_AlgDataQuality_default.C, DBtxt_AlgDeadChip_default.C,
	  DQHeader.cxx, DQHeader.h, DQHotColdElectronics.cxx,
	  DQHotColdElectronics.h, DQLightInjection.cxx, DQLightInjection.h,
	  DQRawDigits.cxx, DQRawDigits.h, DQSpillServer.cxx,
	  DQSpillServer.h, DataQualityModule.cxx, DataQualityModule.h,
	  DumpBadElectronics.cxx, DumpBadElectronics.h, LinkDef.h, README,
	  RawChip.cxx, RawChip.h, RawReadout.cxx, RawReadout.h,
	  dataquality.C, dumpbadelectronics.C:

	First verion of "CandMorgue" software.

2006-03-19 05:11  avva

	* CandFitTrackSA/TrackFilterBFCalibFD.cxx:

	Added missing 'abs'.

2006-03-18 02:40  George Irwin <gmieg@slac.stanford.edu>

	* setup/packages-S06-03-17-R1-21:

	First commit

2006-03-18 02:23  George Irwin <gmieg@slac.stanford.edu>

	* setup/setup_minossoft_SLAC:

	Switch TSQL host from medfly to costello.

2006-03-17 23:38  arms

	* MCMonitor/: MCMonitor.cxx, MCMonitor.h, MCMonitorHistograms.cxx,
	  mcmon_hist_list.txt, macro/makeMCMonitorPlots.C:

	Increase truth and truth-reco Evt vtx plot ranges well into the rock region in front of the detectors.

2006-03-17 21:27  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	move code to select beam events based on timing out of the IsGoodBeamCC
	method into its own method.  call that from other selection methods

2006-03-17 21:12  musser

	* CandNtupleSR/: NtpSRRecord.h, NtpSRShieldSummary.h:

	increment class versions

2006-03-17 20:13  cbs

	* Contrib/cbs/MatrixMethod/MatrixHelper.cxx:

	bug fix

2006-03-17 20:06  cbs

	* Contrib/cbs/MatrixMethod/mcinfo.C:

	helper functions for extracting mc info from sntp files

2006-03-17 20:03  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixHelper.h,
	  MatrixMethod.cxx, macros/DataDoMM.C, macros/DoMDCFit.C,
	  macros/DrawContours.C, macros/MakeDataFile.C,
	  macros/MakeMMFile_FLUX.C, macros/MakeMMFile_PAN.C,
	  macros/MakeMMFile_SNTP.C, macros/MakeRealDataFile.C:

	Updated to add skzp2 and modbyrs3

2006-03-17 19:31  musser

	* StandardNtuple/: NtpStRecord.cxx, NtpStRecord.h:

	modified for latest shield additions

2006-03-17 19:30  musser

	* CandNtupleSR/: NtpSRShieldExpected.cxx, NtpSRShieldExpected.h:

	add ShieldExpected

2006-03-17 19:28  musser

	* CandNtupleSR/: LinkDef.h, NtpSRRecord.cxx, NtpSRRecord.h,
	  NtpSRShieldSummary.cxx, NtpSRShieldSummary.h,
	  Module/NtpSRModule.cxx, Module/NtpSRModule.h:

	[no log message]

2006-03-17 18:58  boehm

	* Production/Dev/PreCedar/MC/reco_MC_far_Dev.C:

	Minor corrective tweaks

2006-03-17 18:56  boehm

	* Production/Dev/PreCedar/MC/: reco_MC_far_Cosmic_Dev.C,
	  reco_MC_far_Dev.C:

	Adding in adjustment settings for PhotonTransport and DetSim as requested by Nathaniel

2006-03-17 18:25  musser

	* CandFitTrackCam/: AlgFitTrackCam.cxx, AlgFitTrackCam.h:

	add spectrometer track finding

2006-03-17 18:01  admarino

	* WebDocs/WebDocs.html:

	Made some small updates to the MC section by adding links for the MC
	Naming Scheme page and the MC on Ensotre summary page.

2006-03-17 16:47  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: GNUmakefile, LinkDef.h, MarquardtFitModule.cxx,
	  MarquardtFitModule.h, MinosMinimization.cxx, MinosMinimization.h,
	  MqfBeamInfo.cxx, MqfBeamInfo.h, MqfEnergyBinInfo.cxx,
	  MqfEnergyBinInfo.h, nr.cxx, nr.h, nrtypes.h, nrtypes_lib.h,
	  nrtypes_nr.h, nrutil.h, nrutil_mtl.h, nrutil_nr.h, nrutil_tnt.h,
	  nrutil_val.h, NumRec/GNUmakefile, NumRec/LinkDef.h,
	  NumRec/MinosMinimization.cxx, NumRec/MinosMinimization.h,
	  NumRec/nr.cxx, NumRec/nr.h, NumRec/nrtypes.h,
	  NumRec/nrtypes_lib.h, NumRec/nrtypes_nr.h, NumRec/nrutil.h,
	  NumRec/nrutil_mtl.h, NumRec/nrutil_nr.h, NumRec/nrutil_tnt.h,
	  NumRec/nrutil_val.h, macros/marquardtFit.C:

	make a new directory to hold the numerical recipes and MinosMinimization
	code.  other changes made to try and write out the MqfBeamInfo objects to a
	root file

2006-03-17 16:39  tjyang

	* NueAna/FracVarAna.cxx:

	forgot to include the header file "TFile.h"

2006-03-17 15:22  boehm

	* Production/Dev/PreCedar/MC/: reco_MC_far_Cosmic_Dev.C,
	  reco_MC_far_Dev.C, reco_MC_near_Dev.C:

	Fixed a few of the comment fields and added lines to handle the change to GeoGeometry, they are currently commented out but available for later usage.

	Also it appears the reco_MC_near_Dev file mistakenly had the SimSnarl in the Candidate with BeamNtp output path, instead of the Candidate without BeamNtp path.  This was corrected.

2006-03-16 21:06  admarino

	* NCUtils/NCAnalysisModule.cxx:

	DataSelection plots include run numbers.

	Now calculate the MEGAweight.

	The CorrectMomentumFromRange now includes the detector type since
	the corrections are slightly different between the near and far.

2006-03-16 19:02  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	fix the near detector track recovery cut

2006-03-16 16:59  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	if the track q/p == 0 (ie ANtpTrackInfo::fitMomentum == -9999.) then
	use the track range in GetTrackEnergy

2006-03-16 15:01  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixHelper.h,
	  MatrixMethod.cxx, MatrixMethod.h, macros/CombineHelpers.C,
	  macros/DataDoMM.C, macros/DoMDCFit.C, macros/DoMM.C,
	  macros/DrawContours.C, macros/DrawMMOut.C, macros/MakeDataFile.C,
	  macros/MakeMMFile_FLUX.C, macros/MakeMMFile_PAN.C:

	Swtiched all floats to doubles.
	Updated fid volume.

2006-03-16 04:03  tjyang

	* NueAna/SubShowerVarAna.cxx:

	update SubShowerVarAna for Hai:

	 the not necessarily improved version of code is ready, at least it
	produces less confusing result, with a requirement of phys clusters in
	both views (result of combining PHFracRMS in both views)

2006-03-16 01:09  tjyang

	* MiniBooNEAna/Fill_MBSpill.cxx:

	fix a bug

2006-03-15 23:00  tjyang

	* NueAna/: FracVar.cxx, FracVar.h, FracVarAna.cxx, FracVarAna.h,
	  mlpANN.cxx, mlpANN.h, data/fvann031506.root:

	keep the old fracvars.pid in case it's needed somewhere, add a new one fracvars.pid1

2006-03-15 22:33  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MinosMinimization.cxx,
	  MqfBeamInfo.cxx, macros/marquardtFit.C:

	several changes for stupid things like counting background twice, etc.

2006-03-15 21:50  ishi

	* Contrib/ishi/CCAnalysis/: fast_fit_fd.C, fast_fit_fd.h,
	  fast_fit_ndfd.C, fast_fit_ndfd.h:

	Latest version of analysis code.

2006-03-15 19:50  vahle

	* FDSpecWErrs/: DrawFDPredictHists.C, FDSpecWErrs.cxx,
	  FDSpecWErrs.h, RunFDSpecConfig.C, qsubsysterrs.sh,
	  fitcode/MakePrettyFinalResults.C,
	  fitcode/MakePrettyFinalResults_C.d, fitcode/test_gen_mncont,
	  fitcode/test_gen_mncont.C, fitcode/undork:

	cosmetic changes to drawing code, added batch submission script for syst err runs

2006-03-15 18:33  admarino

	* NCUtils/NCAnalysisUtils.cxx:

	Adding the det type to the GetTrack energy from range.

2006-03-15 17:09  tjyang

	* NueAna/: SubShowerNN.cxx, SubShowerNN.h, SubShowerVar.cxx,
	  SubShowerVar.h, SubShowerVarAna.cxx, mlpANN.cxx, mlpANN.h:

	add Hai and Chris' neural network based on the subshower variables (coded by Hai):
	SubShowerNN.h SubShowerNN.cxx SubShowerVar.h(.cxx) SubShowerVarAna.h(.cxx)
	update my ann as well.

	Tingjun

2006-03-15 02:33  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoGeometry.cxx, GeoGeometry.h:

	Add "DOLOMITE" medium to be used for modeling rock surrounding near
	detector cavern. The densities for DOLOMITE and "ROCK" (the medium used for
	the far detector rock) have been taken "as is" from those used in the gminos
	simulation, although the values 2.85 and 2.5 g/cm^3 respectively seem to be
	flipped from what they should be.
	  Increase the dimensions of the rock surrounding
	the near detector to halfx,y,z = (85,30,200) m.  The far detector halfz has
	also been updated to 200 m.

2006-03-15 02:23  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: drawFarMARS.C, drawFarMARSNoTop.C,
	  drawMARS.C, drawMARSNoTop.C:

	Remove "Far" from name of scripts since they can be used to draw
	MARS view of near detector as well.

2006-03-15 01:42  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianParameter.cxx, MarquardtFitModule.cxx,
	  MarquardtFitModule.h, MinosMinimization.cxx, MqfBeamInfo.cxx,
	  MqfBeamInfo.h, macros/marquardtFit.C:

	fix the way the energy scale variables are called.  use the reco values
	to determine cc and nc in HessianParameter.  include background events
	when weighting the mc values in the fit.  add poisson statistics chi^2
	to the fitter.  make plots of the gradients for each parameter to fit.

2006-03-15 01:38  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	one more shot at getting the energy scale weights correct

2006-03-15 00:48  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/GNUmakefile:

	Add "test" subdirectory to list of subdirs

2006-03-15 00:47  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/macro/: drawFarMARS.C, drawFarMARSNoTop.C:

	macros to draw geometry from MARS level to show layout of hall,tunnel,
	shaft, and s2 hall within rock.  drawFarMARS.C draws outline of MARS (rock)
	box. drawFarMARSNoTop.C draws the contents only.

2006-03-15 00:36  Sue Kasahara <schubert@hep.umn.edu>

	* GeoGeometry/: GeoGeometry.cxx, GeoGeometry.h, GeoShieldGroup.cxx:

	Modify far detector rock dimensions to more closely model that of gminos.
	The rock is now modeled as a box of half-width
	dimensions (halfx,halfy,halfz) = (85 m,30 m,150 m), and the tunnel, shaft,
	S2 cavern and MINOS cavern are modeled within this in the same
	manner as in gminos.

2006-03-14 23:26  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/WebDocs.html:

	linkage to Hugh's NEUGEN3 pages.

2006-03-14 21:59  vahle

	* FDSpecWErrs/: FDSpecWErrs.cxx, FDSpecWErrs.h:

	Added histograms for non weighted mc

2006-03-14 18:39  tjyang

	* NueAna/: AnnAna.cxx, NueRecordAna.cxx:

	turned on AnnAna

2006-03-14 16:22  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianParameter.cxx, MarquardtFitModule.cxx,
	  MinosMinimization.cxx, MqfBeamInfo.cxx, MqfType.cxx:

	changes to use the proper reco energy weighting, get the right bins for the
	energy spectrum and add some print statements

2006-03-14 16:18  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	do the reco energy adjustments correctly

2006-03-14 15:39  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	put in the correct values for the SKZP2 fit and also fix the way the
	FindRecoWeight method works.  it now takes the event energy as an
	argument by reference to give back the adjusted energy and returns the
	adjusted weight (for normalization)

2006-03-14 08:22  Minos CVS group account.  Do not commit from here!

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixHelper.h,
	  MatrixMethod.cxx, MatrixMethod.h, macros/MakeMMFile_FLUX.C:

	bug fixes

2006-03-14 03:39  hartnell

	* NtupleUtils/macros/nuDemo.C:

	Add a macro that shows how to run the NuDemoModule

2006-03-14 03:35  hartnell

	* NtupleUtils/NuDemoModule.cxx:

	Actually get it to compile...

	Still a work in progress.

2006-03-14 03:24  hartnell

	* NtupleUtils/: LinkDef.h, NuDemoModule.cxx, NuDemoModule.h:

	Add a new module to demonstrate how to use the other classes.

2006-03-13 23:58  zarko

	* MCReweight/: Zfluk.cxx, Zfluk.h:

	Updated SKZP parameterization. Now using 7 parameters.
	One for kaons and 6 to parameterize pt-xf weights.

2006-03-13 23:26  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	put in new SKZP2 fit parameters

2006-03-13 23:23  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MinosMinimization.cxx,
	  MqfBeamInfo.cxx, MqfBeamInfo.h, MqfEnergyBinInfo.cxx,
	  MqfType.cxx, macros/marquardtFit.C:

	lots of fixes for the fitting.  add some code to do the poisson chi^2, make
	only the energy bins you want in the beam objects - ie nc, cc, or both.

	other print statements etc

2006-03-13 20:20  admarino

	* Contrib/admarino/run_rock.perl:

	Setting the number of triggers to something more reasonable.

2006-03-13 19:38  mdier

	* WebDocs/database_inventory/dcs_coil_state.cfg:

	corrected version

2006-03-13 19:33  mdier

	* WebDocs/database_inventory/dcs_coil_state.cfg:

	Information about the DCS_COIL_STATE database table

2006-03-13 19:28  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixHelper.h,
	  MatrixMethod.cxx, MatrixMethod.h, macros/CombineHelpers.C,
	  macros/DataDoMM.C, macros/DoMDCFit.C, macros/DoMM.C,
	  macros/DrawContours.C, macros/DrawDataMMOut.C,
	  macros/DrawFitTestContours.C, macros/DrawMMOut.C,
	  macros/LookAtMDCVals.C, macros/MakeDataFile.C,
	  macros/MakeMMFile.C, macros/MakeMMFile_FLUX.C,
	  macros/MakeMMFile_PAN.C, macros/MakeMMFile_SNTP.C,
	  macros/MakeRealDataFile.C, macros/TestFitMechanics.C:

	Lots of changes...
	All histos: TH1F/TH2F -> TH1D/TH2D
	ND neutrino smearing now proceeds by generating a 3D random coord in the
	detector fiducial volume and then rotating to beam coords to calculate the
	weight. Each neutrino is used 10 times.

2006-03-13 17:23  ishi

	* Contrib/ishi/CCAnalysis/fast_fit_ndfd.C:

	Bug in treatment of MC statistical error.

2006-03-13 17:20  rustem

	* RootUtil/: FileFinder.cxx, FileFinder.h, LinkDef.h,
	  test/search.C:

	Utility for searching files using keywords and/or run number range.

2006-03-13 16:38  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	remove spills that are fake triggers in the far detector

2006-03-13 02:02  tjyang

	* NueAna/Display/NueDisplayModule.cxx:

	increase the string length

2006-03-13 01:35  ishi

	* Contrib/ishi/CCAnalysis/make_table.C:

	Add make_table.C which include selection criteria.

2006-03-13 01:34  ishi

	* Contrib/ishi/CCAnalysis/fast_fit_ndfd.C:

	Minor change.

2006-03-12 23:23  ishi

	* Contrib/ishi/CCAnalysis/fast_fit_ndfd.h:

	Set definitions for FD analysis.

2006-03-12 23:20  ishi

	* Contrib/ishi/CCAnalysis/: fast_fit_ndfd.C, fast_fit_ndfd.h,
	  run_fast_fit_nd.sh, run_fast_fit_ndfd.sh:

	Add MODBYRS3 and MEGA fit 10 parameters weight.

2006-03-12 16:55  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx:

	make sure to test that you are using the target position you want to
	IsGoodSpillCC

2006-03-12 15:08  admarino

	* NCUtils/: NCAnalysisModule.cxx, NCAnalysisModule.h:

	Been updated to allow for the PID to be calculated both internally and
	from external histograms.

	A  few varaibles have been added to the AnalysisInfo ouput object:
	-number of event in snarl
	-IsGoodShower - does the shower pass the cuts suggested by Niki on
	2/9/2006
	- separationParameterPAN  this is the PID that is caculated from the
	external PAN histograms, not the ones that are filled by NCAnalysisModule.
	Note that right now the decision for isCC is decided by this PAN
	separation parameter, not the one that is calculated with the PDFs
	generated here.

2006-03-12 15:04  admarino

	* NCUtils/: NCExtractionDP.cxx, NCExtractionDP.h:

	Added a method to resd in the PID PDF histograms from an external file
	(so that one can use the exact same histograms as someone else).  This
	means that now there are two sets of histograms, one that is read in from
	an external file, and one that is filled in NCAnalysisModule.  There is
	now one method to calcualte the PID from the NCAnalysis histos, and one
	that operates on the external histos.

	Also the 1.8% "time dependent" correction was added to the PID calculation
	for the PID for far data, as was suggested on 3/10/2006

2006-03-11 23:31  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, MarquardtFitModule.cxx,
	  MarquardtFitModule.h, MqfBeamInfo.cxx, MqfBeamInfo.h,
	  MqfEnergyBinInfo.cxx, MqfType.cxx, macros/marquardtFit.C:

	make it possible to give the fitter a path to a bunch of data files, still
	only use one mc file.  also change some ttrees to tchains.

	finally add some code to draw near and far spectra at the same time when
	fitting over both data sets

2006-03-11 21:18  tjyang

	* MiniBooNEAna/MNtpModule.cxx:

	use strip time instead of track time in calculating chi2

2006-03-11 21:16  tjyang

	* NueAna/Display/NueDisplayModule.cxx:

	using strip time instead of track time to calculate chi2

2006-03-11 00:52  kordosky

	* Mad/MadDpAnalysis.cxx:

	revers is data and shw_correction_mode commands in RecoShwEnergy() calls of MadDpAnalysis

2006-03-11 00:17  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx:

	add total shower energy

2006-03-10 23:44  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpAnalysisInfo.cxx, ANtpAnalysisInfo.h:

	add flag for whether to use the shower in the energy calculation or not

2006-03-10 23:40  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	correct the track fit momentum using Jim's correction

2006-03-10 23:29  tjyang

	* MiniBooNEAna/macros/fill_mbspill.C:

	load the correct library

2006-03-10 22:58  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx, MNtpModule.h:

	add mc true energy information

2006-03-10 21:06  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	make sure to call the shower energy correction thing correctly

2006-03-10 20:57  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianParameter.cxx,
	  MqfType.cxx, macros/marquardtFit.C:

	fix some values of neugen sigmas, and change a few things to calculate
	slopes

2006-03-10 20:17  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpAnalysisInfo.cxx, ANtpAnalysisInfo.h:

	add variables to hold PAN PID value and event number in snarl

2006-03-10 19:23  kordosky

	* Mad/: MadDpID.cxx, MadDpID.h, MadMKAnalysis.cxx, MadMKAnalysis.h:

	a bunch of updates for the jan-06a branch of Mad. Accounting for trk.fit.pass==0, 1.8% correction to pid, etc.

2006-03-10 19:08  kordosky

	* Mad/fddataquality.h:

	add Daves fddataquality.h file

2006-03-10 19:06  kordosky

	* Mad/: data/dp_pdf_far_le.root, data/dp_pdf_near_le.root,
	  fddataquality.h:

	a bunch of updates for the jan-06a branch of Mad. Accounting for trk.fit.pass==0, 1.8% correction to pid, etc.

2006-03-10 18:57  kordosky

	* Mad/: MadDpID.cxx, MadDpID.h, MadMKAnalysis.cxx:

	correct MadDpID and MadMKAnalysis to account for 1.8% shift in pulseheight related PID quantities

2006-03-10 17:24  tjyang

	* MiniBooNEAna/MNtpModule.cxx:

	modify the way to fill shower information

2006-03-10 15:39  Minos CVS group account.  Do not commit from here!

	* Contrib/yumiceva/notes/beam_na49/: note.tex,
	  figures/binning_piP.eps, figures/binpt_corr.eps,
	  figures/binxf_corr.eps, figures/cross_piP.eps, figures/na49.eps,
	  figures/na49.ps, figures/na49_bincorrections.eps,
	  figures/na49_bincorrections.ps, figures/na49_binning.eps,
	  figures/na49_binning.ps, figures/na49_semilog_f_pt.eps,
	  figures/na49_semilog_f_pt.ps:

	Draft of the draft of the simple NA49 simulation with
	the best MC software.

2006-03-10 15:34  Minos CVS group account.  Do not commit from here!

	* Contrib/yumiceva/notes/bfieldmaps/note.tex:

	Update documentation about the d.. bfield maps

2006-03-10 15:04  vahle

	* FDSpecWErrs/reallyrunData.C:

	commiting little macro for queue submission

2006-03-10 15:04  vahle

	* FDSpecWErrs/RunFDSpecConfigFinalRealThing.C:

	updating run macro with new paths to files

2006-03-10 15:03  vahle

	* FDSpecWErrs/DrawFDPredictHists.C:

	Adding macro to make pretty plots

2006-03-10 12:31  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixMethod.cxx,
	  MatrixMethod.h:

	Added SKZP reweighting

2006-03-10 12:10  asousa

	* NueAna/AngClusterFitAna.cxx:

	Preventing potential memory leaks due to histogram replacement when using
	AddFile in the job script.

2006-03-10 05:31  Robert Hatcher <rhatcher@fnal.gov>

	* AnalysisNtuples/Module/ANtpInfoObjectFillerNC.cxx:

	useda "->" where "." was appropriate; GetSnarlEventSummary() apparently
	returns an object not a pointer (nor a reference).

2006-03-10 01:42  tjyang

	* MiniBooNEAna/MNtpModule.cxx:

	fix a bug in filling track end v position

2006-03-09 23:41  dap56

	* Mad/macros/CCSTD.C:

	Cleaned up CCSTD.C - now points to the "standard" PDF files for
	LE-10 ND and FD data/MC

2006-03-09 22:00  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpEventInfoNC.cxx, ANtpEventInfoNC.h,
	  Module/ANtpInfoObjectFillerNC.cxx:

	add a variable to ANtpEventInfoNC::eventSummaryPlanes to keep track of the
	number of planes hit according to NtpEventSummary->plane.n - used to
	calculate the PID in the CC analysis

2006-03-09 19:33  kordosky

	* Mad/MadDpAnalysis.cxx:

	grrrrr...

2006-03-09 19:33  kordosky

	* Mad/: MadMKAnalysis.cxx, MadMKAnalysis.h, MadQuantities.cxx,
	  MadQuantities.h:

	Properly do energy corrections in MK and DpAnalysis

2006-03-09 19:32  kordosky

	* Mad/data/: dp_pdf_far_le.root, dp_pdf_near_le.root:

	PID PDFs now match what David uses

2006-03-09 18:51  vahle

	* FDSpecWErrs/RunFDSpecConfigFinalRealThing.C:

	Added track reclaimation to cuts macro

2006-03-09 11:44  raufer

	* AnalysisNtuples/Module/ANtpInfoObjectFillerNC.cxx:

	Bug fix in ANtpInfoObjectFillerNC::FillInformation(event,...)

	After looping over all events in the snarl to find the largest event, call
	SetEventInSnarl(event) again. Without this change the track and shower branches
	for each event in the snarl are filled with the values from the largest event.

	All AnalysisNtuples which have been processed after largestEventInSnarl went in
	will have to be reprocessed.

2006-03-09 11:09  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, MatrixHelper.h:

	[no log message]

2006-03-09 10:01  cbs

	* Contrib/cbs/MatrixMethod/MatrixHelper.cxx:

	update error calculation for histogram bins

2006-03-09 09:19  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, macros/MakeMMFile.C:

	updates

2006-03-09 08:18  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/scripts/cs_set_refresh_intervals.pm:

	Reduce SPILLTIMEND 20 -> 1

2006-03-09 07:47  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/doc/dbmauto_status.html:

	FNAL is exporting DCS_MAG_NEAR because BFIELDCOILCURRENT doesn't yet have ND data

2006-03-09 04:54  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* SpillTiming/SpillTimeFinder.cxx:

	Add idiot warning for MC context.

2006-03-09 01:55  hartnell

	* NtupleUtils/: NuCuts.cxx, NuCuts.h, NuEvent.cxx, NuEvent.h,
	  NuReco.cxx, NuReco.h:

	Commit some useful bits of my analysis code so others can see (and use)
	the cuts I make on NuMuBar for example.

	More to come... but it's time for dinner.

2006-03-08 23:27  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Digitization/: DigiSignal.cxx, DigiSignal.h:

	Version 3 of DigiSignal.

	NOTE: This will create a backward-incompatable change with old Candidate files! Truth information may break!

	If desired, I may be able to write a custom streamer to recover the old data, but since Candidate files are not heavily
	used, I'm hoping I don't have to.

	This version should cure memory leaks: all DigiScintHit pointers are now internally stored as TRefs.
	This code has been tested, and candidate files no longer show the memory leak Sergei found.

	--Nathaniel

2006-03-08 23:23  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DataUtil/Truthifier.cxx:

	Remove explict dependence on DigiSignal data format within the Truthifier.

2006-03-08 23:22  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DetSim/: SimQieElectronics.cxx, SimQieElectronics.h,
	  SimQiePerfectElectronics.cxx, SimQiePerfectElectronics.h,
	  SimVaElectronics.cxx, SimVaElectronics.h,
	  SimVaTimedElectronics.cxx:

	Introduce (untested) code to do inverse-calibration of PMT+electronics
	using the calibrator, rather than relying on hardcoded nonlinearity simulation.

2006-03-08 23:21  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DetSim/SimDetector.cxx:

	Fix up some printf statements

2006-03-08 23:20  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DetSim/GNUmakefile:

	Add SimCheck code to standard build.

2006-03-08 23:19  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DetSim/SimCheck/SimCheck.cxx:

	Old edit: remove PE list for compiler happiness.

2006-03-08 23:18  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* DetSim/DetSim.cxx:

	Remove explicit dependence on structure of DigiSignal

2006-03-08 19:32  kordosky

	* Mad/: MadDpAnalysis.cxx, MadMKAnalysis.cxx, MadQuantities.cxx,
	  MadQuantities.h, macros/EvDisplayList.C:

	Account for detector and data/mc dependent energy corrections in MadQuantities. Attempt to fix DpAnalysis to work with the new changes.

2006-03-08 18:44  cbs

	* Contrib/cbs/MatrixMethod/: MatrixHelper.cxx, reweight.C:

	re-use neutrinos when making the matrix

2006-03-08 17:57  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MqfType.cxx, MqfType.h:

	add the normalization parameter

2006-03-08 17:55  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianParameter.cxx, MarquardtFitModule.cxx:

	fix some array indicies and dont reweight to skzp or modbyrs3 when
	determining the gradients.  minor change in output to MarquardtFitModule

2006-03-08 15:57  admarino

	* NCUtils/NCExtractionDP.h:

	Added definition for FillPDFs method to only fill PDFs for numu CC events.

2006-03-08 15:56  admarino

	* NCUtils/NCAnalysisModule.cxx:

	Removed call to SetTrue for NCAnalysisADM

2006-03-08 13:39  musser

	* RecoBase/: CandRecoHandle.cxx, CandRecoHandle.h:

	add GetCandSliceWritable method, to allow access to writable version of CandSlice if 'Slushy' is disabled

2006-03-08 11:42  asousa

	* NueAna/: MdaDiscrimAna.cxx, MdaDiscrimAna.h:

	Making sure discriminant calculation fails gracefully if the SAS coefficient
	file is absent or is not defined.

2006-03-08 00:24  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	make the CC cuts be the same as the other analyses

2006-03-07 23:52  mdier

	* NueAna/NueBeamMonModule.cxx:

	Don't print out a warning message if one is running over MC and MOM contains NueAnaRecords. Note that the beam monitoring info is only filled when running over data.

2006-03-07 22:56  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/Module/ANtpInfoObjectFiller.cxx:

	make sure to include the proper header files

2006-03-07 22:51  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpHeaderInfo.cxx, ANtpHeaderInfo.h,
	  Module/ANtpInfoObjectFiller.cxx:

	add code to get the near detector coil current for each event.  get the
	far too while i am at it

2006-03-07 22:08  admarino

	* NCUtils/NCAnalysisCuts.cxx:

	Now uses 3 degrees in the far detector for the beam cut, since that is
	what David is using.

2006-03-07 22:01  admarino

	* NCUtils/NCAnalysisModule.cxx:

	By defualt it now creates an NCExtractionDP object, but this can easily be
	changedi nthe EndJob module.

	The following methods have been added to create the PID histos and Fill an
	NCExtractionDP object:

	void FillPDFs(TChain *chain, NCExtractionDP *dp);
	 void ExtractNC(TChain *chain, NCExtractionDP *dpMC, NCExtractionDP
	*dpData,  bool dataMC=false);

	The following methods have been added to make and draw some plots of the
	event selection and efficiencies.

	void FillEfficiencyPlots(TChain *chain);
	  void FillSelectionPlots(TChain *chain);
	  void FillDataSelectionPlots(TChain *chain);
	  void DrawEfficiencyPlots();
	  void DrawSelectionPlots();
	  void DrawDataSelectionPlots();

	Also a few registry keys have been added
	"MakeMCSelectionPlots"
	"MakeDataSelectionPlots"
	"TargetPosition"
	"FillMCNtuples"
	"MCFileName"

	If FillMCNtuples=false, the PID PDFs are read in from a file, specified by
	MCFilename.

2006-03-07 21:59  vahle

	* FDSpecWErrs/GNUmakefile:

	And the makefile

2006-03-07 21:58  vahle

	* FDSpecWErrs/: FDSpecWErrs.cxx, FDSpecWErrs.h, LinkDef.h,
	  RunFDSpecConfig.C, RunFDSpecConfigFinalRealThing.C,
	  RunFDSpecFakeIt.C, RunFDSpecNewMockData.C, reallyrunConfig.C,
	  reallyrunNewMDC.C, fitcode/DrawResults.C,
	  fitcode/MakePrettyFinalResults.C,
	  fitcode/MakePrettyFinalResults_C.d, fitcode/functions.C,
	  fitcode/functions2.h, fitcode/generate_mncont.C,
	  fitcode/makegenerate_mncont, fitcode/makeundork,
	  fitcode/prototypes.h, fitcode/qsubfits.sh, fitcode/runfits.sh,
	  fitcode/test_gen_mncont, fitcode/test_gen_mncont.C,
	  fitcode/undork, fitcode/undork.C:

	F/N ratio analysis

2006-03-07 21:31  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	FDSpecWerrs package for T. Vahle.

2006-03-07 21:29  Robert Hatcher <rhatcher@fnal.gov>

	* FDSpecWErrs/.cvsignore:

	Initial revision

2006-03-07 21:29  Robert Hatcher <rhatcher@fnal.gov>

	* FDSpecWErrs/.cvsignore:

	start FDSpecWErrs package for T. Vahle

2006-03-07 21:13  admarino

	* NCUtils/NCAnalysisModule.h:

	New histograms have been added as well as some subroutines to fill and
	plot these histograms.  Also there is now an ExtractNC method to fill and
	NCExtractionDP module.

	The following methods have been added:

	void FillPDFs(TChain *chain, NCExtractionDP *dp);
	 void ExtractNC(TChain *chain, NCExtractionDP *dpMC, NCExtractionDP
	*dpData,  bool dataMC=false);
	void FillEfficiencyPlots(TChain *chain);
	  void FillSelectionPlots(TChain *chain);
	  void FillDataSelectionPlots(TChain *chain);
	  void DrawEfficiencyPlots();
	  void DrawSelectionPlots();
	  void DrawDataSelectionPlots();

	The following objects have been added:

	 int fTargetPosition;  // target position for beam -
	0=unknown,1=LE,2=ME,3=HE,4=psME,5=psHE
	bool fFillMCNtuples;  // if FillNtuples=true, and FillMCNtuples are false,
	only data is filled
	  bool fUseMCAsData;
	  bool fMakeMCSelectionPlots;
	  bool fMakeDataSelectionPlots;

	 TH1F *hcctot;  // all events
	  TH1F *hcctrack;  //events with a track
	  TH1F *hccfid; // events with above +a track in Fiducial
	  TH1F *hccdir; // events with above +a direction cosine within 0.6 of
	beam
	  TH1F *hccli; // events with above + li topology
	  TH1F *hccfit; // events with above + trkfit pass
	  TH1F *hccpid; // events with above + pid

	  TH1F *hnctot;  // all events
	  TH1F *hnctrack;  //events with a track
	  TH1F *hncfid; // events with a track in Fiducial
	  TH1F *hncdir; // events with a direction cosine within 0.6 of beam
	  TH1F *hncli; // events with above + li topology
	  TH1F *hncfit; // events with above + trkfit pass
	  TH1F *hncpid; // events with above + pid

	  TH1F *hdtot;  // all events
	  TH1F *hdtrack;  //events with a track
	  TH1F *hdfid; // events with a track in Fiducial
	  TH1F *hdfit; // good events + trkfit pass
	  TH1F *hdbeam; // above + beam snarl quality cuts
	  TH1F *hdpid; // events with above + pid

2006-03-07 21:08  admarino

	* NCUtils/macros/ncccSeparation.C:

	Just addeda few more comments.  Also nore that the target position can now

2006-03-07 21:03  admarino

	* NCUtils/macros/ncccSeparation.C:

	Addeda few additional runkeys, a few to make plots and one to load the MC
	ntuples from another file without remaking them.

2006-03-07 20:54  admarino

	* NCUtils/NCExtractionDP.cxx:

	updating the binsto the latest ones David is using.

2006-03-07 20:47  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/check_access:

	add admarino to NCUtils.

2006-03-07 20:14  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianParameter.cxx, MarquardtFitModule.cxx,
	  MarquardtFitModule.h, MinosMinimization.cxx, MinosMinimization.h,
	  MqfType.cxx, MqfType.h:

	add in ability to do near and far fits separately

2006-03-07 15:34  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx,
	  NCExtractionDP.cxx:

	commit the latest round of changes

2006-03-07 15:34  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MqfBeamInfo.cxx, MqfType.cxx,
	  macros/marquardtFit.C:

	commit whatever the last changes were.  still a work in progress

2006-03-07 01:48  cbs

	* Contrib/cbs/MatrixMethod/MatrixHelper.cxx:

	[no log message]

2006-03-07 01:37  cbs

	* Contrib/cbs/MatrixMethod/: GNUmakefile, LinkDef.h,
	  MatrixHelper.cxx, MatrixHelper.h, MatrixMethod.cxx,
	  MatrixMethod.h, reweight.C, macros/DataDoMM.C, macros/DoMDCFit.C,
	  macros/DoMM.C, macros/DrawContours.C, macros/DrawDataMMOut.C,
	  macros/DrawFitTestContours.C, macros/DrawMMOut.C,
	  macros/LookAtMDCVals.C, macros/MakeDataFile.C,
	  macros/MakeMMFile.C, macros/MakeRealDataFile.C,
	  macros/TestFitMechanics.C:

	matrix method code

2006-03-06 17:22  cbs

	* Contrib/cbs/PlotOrg/macros/RecoFile_CC_ND.C:

	plotting macro for CC analysis Near Detector

2006-03-06 17:20  cbs

	* Contrib/cbs/PlotOrg/: PlotMaker.cxx, macros/RecoFile_CC.C:

	Updates

2006-03-06 15:44  asousa

	* ControlRoomSoftware/CRLForms/OmCheckListFar.htm:

	Fix typos.

2006-03-06 11:13  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/test/TestDbi.cc:

	Enclose RDBC commands within a try/catch construct

2006-03-06 07:05  Nick West <n.west1@physics.oxford.ac.uk>

	* setup/setup_minossoft_oxford.csh:

	Check that supplied release exists

2006-03-05 22:22  tjyang

	* NueAna/: FracVarAna.cxx, FracVarAna.h:

	modified the shower selection: the primary shower close to the track
	vertex or the biggest shower if there is no track, to be consistent
	with the CC analysis (code was taken from Mad).

2006-03-05 21:14  tjyang

	* MiniBooNEAna/: CountPot.cxx, CountPot.h:

	add a module to count MiniBooNE POTs based on our cosmic data.

2006-03-05 21:13  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx,
	  macros/countpot.C:

	add runtype in the ntuple, thanks Geoff and Caius.

2006-03-05 18:17  Robert Hatcher <rhatcher@fnal.gov>

	* IoModules/IoDummyStreamItr.cxx:

	comment out unused method argument to avoid compiler warning.

2006-03-05 17:08  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpEventInfoNC.cxx, ANtpEventInfoNC.h,
	  Module/ANtpInfoObjectFillerNC.cxx:

	add largestEventInSnarl flag to ANtpEventInfoNC object

2006-03-04 22:12  Minos CVS group account.  Do not commit from here!

	* Contrib/yumiceva/: .cvsignore, BeamTools/BTXsec.cc,
	  BeamTools/make_histograms.C, BeamTools/make_histograms_wfluk.C,
	  BeamTools/plot_histograms.C,
	  BeamTools/run_make_histograms_wfluk.C,
	  BeamTools/run_plot_histograms.C,
	  BeamTools/run_plot_histograms_w.C, notes/bfieldmaps/.cvsignore,
	  notes/bfieldmaps/note.tex, notes/bfieldmaps/figures/BHCurves.eps,
	  notes/bfieldmaps/figures/BHCurves_log.eps,
	  notes/bfieldmaps/figures/EOT_ND_iso_collar.eps,
	  notes/bfieldmaps/figures/EOT_bet_sideview.eps,
	  notes/bfieldmaps/figures/EOT_iso_mesh.eps,
	  notes/bfieldmaps/figures/EOT_mesh.eps,
	  notes/bfieldmaps/figures/FD_coil.eps,
	  notes/bfieldmaps/figures/FD_coil.jpg,
	  notes/bfieldmaps/figures/FD_cross_coil.eps,
	  notes/bfieldmaps/figures/ND_cross_coil.eps,
	  notes/bfieldmaps/figures/bfld_208_layer1.eps,
	  notes/bfieldmaps/figures/bfld_208_layer2.eps,
	  notes/bfieldmaps/figures/bfld_map_160.eps,
	  notes/bfieldmaps/figures/bfld_map_161.eps,
	  notes/bfieldmaps/figures/bfld_map_162.eps,
	  notes/bfieldmaps/figures/bfld_map_208.eps,
	  notes/bfieldmaps/figures/bfld_map_209.eps,
	  notes/bfieldmaps/figures/bfld_map_210.eps,
	  notes/bfieldmaps/figures/collar_FD_elements.eps,
	  notes/bfieldmaps/figures/collar_FD_iso.eps,
	  notes/bfieldmaps/figures/collar_FD_iso_cut.eps,
	  notes/bfieldmaps/figures/single_mesh.eps:

	upload my bfield map note and update some beam scripts.

2006-03-04 22:08  mdier

	* BeamDataUtil/test/StndBmsSpin.cxx:

	Save some changes I made recently

2006-03-04 20:13  arms

	* MCMonitor/macro/outputMCMonitorPlots.C:

	Set TH1::SetMinimum(0) for all output comparison plots so everything you want to see is displayed.

2006-03-04 17:39  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MqfEnergyBinInfo.cxx,
	  macros/marquardtFit.C:

	fix the filling of the beam weights in the MqfEnergyBinInfo object

2006-03-04 13:26  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MarquardtFitModule.h,
	  MqfBeamInfo.cxx, MqfBeamInfo.h, MqfEnergyBinInfo.cxx,
	  macros/marquardtFit.C:

	some last minute changes for doing the fits

2006-03-04 00:32  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	make a function to return the mega fit reweighting value with MODBYRS3

2006-03-03 20:49  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	3rd time lucky

2006-03-03 20:46  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	oops - compile then commit

2006-03-03 20:44  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCType.h:

	add a specifier for any target position, also cut on the new types

2006-03-03 20:42  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCType.h:

	add types for target positions

2006-03-03 19:59  ishi

	* Contrib/ishi/CCAnalysis/: fast_fit_ndfd.C, fast_fit_ndfd.h:

	Updates of analysis tools for Collaboration meeting at Fermilab.

2006-03-03 17:13  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/scripts/checksum_str_comp.pm:

	Further loosen tolerance 1.e-9 -> 1.e-6.  For reasons I don't
	understand the process

	  MySQL Db -> character representation -> ORACLE DB

	introduces more noise now that ORACLE uses IEEE floats.  Also when
	scaling tolerance to take account of the magnitude of the number,
	don't allow scale to be less than unity. If summing a mixture of
	numbers >1 and <1 that are within tolerance the sums can become become
	very small leading to a large fractional error.

2006-03-03 16:27  mdier

	* NueAna/BeamMon.h:

	some changes in the comments

2006-03-03 16:11  mdier

	* NueAna/: BeamMon.cxx, BeamMon.h, LinkDef.h, NueBeamMonModule.cxx,
	  NueBeamMonModule.h, NueModule.cxx, NueRecordAna.cxx,
	  NueRecordAna.h, macros/MakeAnaNueTree.C:

	Rewrite of how the beam monitoring info gets filled into the NueAna ntuples. Introduced a job module that fills the BeamMon branch of every NueRecord found in MOM with information from the database. Also introduced a variety of new members in the BeamMon class, like a flag that indicated if this is goof quality beam or not.

2006-03-03 03:30  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_extern/v03.table:

	MySQL libraries are in $INSTALLATION/lib/mysql, so we need to add that
	to the LD_LIBRARY_PATH as well.

2006-03-03 02:58  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/Module/ANtpEventManipulator.cxx:

	return the shower in the first entry of the tclones array for a snarl for
	now

2006-03-03 02:06  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianParameter.cxx, MarquardtFitModule.cxx,
	  MarquardtFitModule.h, MinosMinimization.cxx, MqfBeamInfo.cxx,
	  MqfBeamInfo.h, MqfEnergyBinInfo.cxx, MqfEnergyBinInfo.h,
	  MqfType.cxx, MqfType.h, macros/marquardtFit.C:

	all sorts of debugging

2006-03-03 01:55  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	still add in the shower energy even if it is from a brem

2006-03-03 01:24  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	still output an energy if using the fit momentum instead of range

2006-03-03 01:13  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisModule.cxx:

	change for the FindSurvivalProbability thing

2006-03-03 01:12  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.h:

	find survival probability now takes a baseline as an argument

2006-03-03 01:05  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	when the track isnt contained, return the fit momentum.  arg!

2006-03-02 22:57  Mayly Sanchez <msanchez@tuhepi.phy.tufts.edu>

	* NueAna/: NueRecord.h, Trimmer.cxx, Trimmer.h,
	  macros/MakeTrimmedAna.C:

	Trimmer fixes to use configurable cuts from the macro. Updated ClassDef in NueRecord to 4, since it had changed from the current produced files.

2006-03-02 22:41  arms

	* RootUtil/TPSTest/: TPSTest.cxx, TPSTest.h, htmldoc/TPSTest.h,
	  htmldoc/TPSTest.html, htmldoc/TPSTest_Tree.pdf,
	  htmldoc/src/TPSTest.cxx.html:

	Change some documentation to allow THtml to auto-generate html for this class. Add htmldoc contents.

2006-03-02 21:41  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_root/: table.template,
	  version.template:

	template table/version files for minos_root (one 'sed' away from usable
	for new root releases).

2006-03-02 21:40  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_root/: v5-10-00.table,
	  v5-10-00.version:

	v5-10-00 table/version files

2006-03-02 20:21  hartnell

	* MeuCal/MeuAnalysis.cxx:

	Jeff de Jong reported that trying to run on files using a file location
	of something like:
	dcap://fndca1.fnal.gov:2...
	didn't work.

	It turns out that

	TFile* f=new TFile("dcap://fndca1.fnal.gov:2...file.root")

	didn't work, but it seems that

	TFile* f=TFile::Open("dcap://fndca1.fnal.gov:2...file.root")

	does work, so I have switched to that! I think it's something to do with
	the "TFile pluggins", but haven't bothered to look in detail.

2006-03-02 19:46  Brett Viren <bv@bnl.gov>

	* setup/msrt:

	Add optional "-H" to msrt_snapshot to force it to tag the HEAD state
	instead of the state existing at the time implied by the tag label.
	Example: to do today's tagging including appending the most recent
	current frozen release label:

	  msrt snapshot -H -f R1-21 06-03-02

	W/out "-H" the behavior is unchanged.

2006-03-02 19:20  Robert Hatcher <rhatcher@fnal.gov>

	* setup/packages-S-R1-21:

	remove screwed up packages file.

2006-03-02 19:16  Robert Hatcher <rhatcher@fnal.gov>

	* setup/packages-S06-03-02-R1-21:

	First commit

2006-03-02 19:09  Robert Hatcher <rhatcher@fnal.gov>

	* setup/packages-S-R1-21:

	First commit

2006-03-02 18:18  arms

	* RootUtil/TPSTest/TPSTest.cxx:

	Revert TMath::CeilNint() and TMath::FloorNint() to std C++ math library functions ceil() and floor() to resolve compile problems with a version of ROOT that is **14 months old**.

2006-03-02 15:22  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/Calibrator.cxx:

	Duh.. default linearity calibrator should not be a drift cal scheme.

2006-03-01 23:09  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx:

	fix the cut on IsGoodBeamEvent that checks the time of the event
	relative to the spill.  also fix numbering in GetBeamWeight

2006-03-01 21:01  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx:

	add MiniBooNE pot and horn current information in the ntuple

2006-03-01 19:06  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/QuadLinearityCalScheme.cxx:

	Fix another divide-by-zero for the case beta is exactly zero.

2006-03-01 15:31  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisModule.cxx, NCAnalysisUtils.cxx,
	  NCAnalysisUtils.h, NCExtractionADM.cxx, macros/ncccSeparation.C:

	some minor changes to message formatting, make sure to weight everything
	by skzp off the top

2006-03-01 14:55  zarko

	* MCReweight/Zbeam.h:

	Corrected bug found by Masaki. onlyPos was declared with wrong dimension.

2006-03-01 14:40  asousa

	* NueAna/data/: Coeff_QEtrain_nconly_Thesis.dat,
	  Coeff_QEtrain_nconly_Thesis_single.dat,
	  Coeff_QEtrain_nconly_Thesis_twovar.dat:

	Adding SAS calibration files for use with MdaDiscrim. First one includes the
	discriminant obtained in the latest MDA analyis, whereas the other files
	are single and two variable discriminants useful for testing and debugging.

2006-03-01 14:37  asousa

	* NueAna/: MdaDiscrim.cxx, MdaDiscrim.h, MdaDiscrimAna.cxx,
	  MdaDiscrimAna.h, NueModule.cxx, NueModule.h, NueRecord.cxx,
	  NueRecord.h, NueRecordAna.cxx, NueRecordAna.h,
	  macros/MakeAnaNueTree.C:

	Filling MdaDiscrim classes. These allow for claculation of MDA PID for any
	event using a pre-determined SAS calibration data set. Configurable parameters
	consist of the path to the calibration file and value of the nue probability
	threshold, as illustrated in the macro MakeAnaNueTree.C.

2006-03-01 07:07  Nick West <n.west1@physics.oxford.ac.uk>

	* setup/setup_minossoft_oxford.csh:

	Use private utility to pick default Base Release

2006-03-01 02:32  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/doc/README:

	Remove instructions for additional env variables to be set when running
	FLUKA/MICAP.  All data files are now located using look4file to
	check cwd, $SRT_PRIVATE_CONTEXT/G3PTSim/data, and
	$SRT_PUBLIC_CONTEXT/G3PTSim/data, in that order.

2006-03-01 02:28  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gcalor/gcalor_unix.F:

	Clean up look4file usage.

2006-03-01 02:27  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/miface/gmorin.F:

	Modify to use look4file to search for xsneut95.dat.

2006-03-01 02:22  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/fluka/berttp.F:

	Modify to use look4file when searching for flukaaf.dat.

2006-03-01 01:37  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianModule.h,
	  HessianParameter.cxx, HessianParameter.h, MarquardtFitModule.cxx,
	  MinosMinimization.cxx, MinosMinimization.h, MqfBeamInfo.cxx,
	  MqfBeamInfo.h, MqfEnergyBinInfo.cxx, MqfEnergyBinInfo.h,
	  MqfType.cxx, MqfType.h, macros/marquardtFit.C:

	all sorts of changes to do the fitting.  too numerous to explain, but
	at least it handles the oscillation fits correctly.

2006-03-01 01:27  Sue Kasahara <schubert@hep.umn.edu>

	* setup/packages-development:

	Add NtupleUtils

2006-03-01 01:25  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gcalor/gcalor_unix.F:

	Add one more divide-by-zero patch after consultation with Robert.

2006-03-01 00:52  hartnell

	* NtupleUtils/LISieve.cxx:

	Quieten down

2006-03-01 00:44  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/GNUmakefile:

	Move "LinkDef.h :" target until after standard.mk include so that "all"
	is default target, i.e. package can be built with "gmake all" or "gmake".

2006-03-01 00:34  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/util/f77_isnan.c:

	From labyrinth utilities, used by gcalor_unix.F patch.

2006-03-01 00:19  hartnell

	* NtupleUtils/: LISieve.cxx, LISieve.h:

	Add the code to sieve the FD data for LI events. Authored by Phill
	Litchfield and myself with contributions from others.

	See the email I'm about to write to minossoft for details...

2006-02-28 23:58  hartnell

	* MeuCal/MeuPlots.h:

	Somehow the MeuPlots::Pct function never had an implementation but
	nothing complained...

2006-02-28 23:10  hartnell

	* NtupleUtils/: GNUmakefile, LinkDef.h:

	Add basic versions of these

2006-02-28 21:59  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/pythia6/: v6_319.table, v6_326.table:

	Genie expect env symbol PYTHIA6 rather than PYTHIA6PATH...make it so.

2006-02-28 21:57  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gcalor/gcalor_unix.F:

	Add M.Kordosky and R.Hatcher mods to protect against fpes, a la those in
	the gminos version of gcalor_unix.

2006-02-28 21:41  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/pythia6/: v6_319.table, v6_319.version,
	  v6_326.table, v6_326.version:

	UPS table and version files for v6_319 and v6_326.
	NOTE: these are built into libPythia6.so thin-wrapper libraries to make
	them accessible to ROOT.

2006-02-28 21:16  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/: genie/.cvsignore, pythia6/.cvsignore:

	stuff for CVS to ignore.

2006-02-28 20:34  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/macro/PTSim_g3Config.C:

	Modify comments to reflect gcalor option.

2006-02-28 20:32  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/TGeant3/TGeant3gu.cxx:

	Add gcalor call to guhadr, and calsig call to guphad.  Hadronic interaction
	codes are now defined such that:
	  ihadr < 4 => GHEISHA
	        = 4 => FLUKA
	        = 5 => MICAP(low E)/FLUKA(high E)
	        = 6 => GCALOR

2006-02-28 20:14  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/GNUmakefile:

	Add gcalor directory to src subdirectory list.  Build symbolic links from
	data directory to gcalor/*.dat targets as:
	        ln -sf ../gcalor/xsneut.dat data/xsneut.dat
	        ln -sf ../gcalor/chetc.dat data/chetc.dat
	This works, but implementation in GNUmakfile is a kludge (symbolic links
	created under LinkDef.h target).  Suggestions on how to do this right welcome!

2006-02-28 19:30  Sue Kasahara <schubert@hep.umn.edu>

	* CVSROOT/: check_access, modules:

	Add NtupleUtils to modules list, and hartnell to package author list.

2006-02-28 19:27  Sue Kasahara <schubert@hep.umn.edu>

	* NtupleUtils/.cvsignore:

	New package to store utilities used with the standard ntuples.

2006-02-28 19:27  Sue Kasahara <schubert@hep.umn.edu>

	* NtupleUtils/.cvsignore:

	Initial revision

2006-02-28 18:35  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/data/chetc.dat:

	Remove symbolic link, since apparently this doesn't work ( a cvs update
	draws down the whole data file, not just the link )

2006-02-28 16:58  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* SpillTiming/: SpillTimeFinder.cxx, macros/insert_bounds.C:

	Found a workaround for the 'nothing in the next seqno' problem.
	Program now loops forward, searching for a valid context with some rows.
	To keep it from just looping forever if you reach the end of the table, I will need
	to insert 'bounds' into the table: a single fake spill in 1970 and one in 2037.

2006-02-28 15:42  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/Calibrator.cxx:

	Muon calibrator was causing crashes if table didn't exist, so I reverted to the 'no calibration' scheme.
	---N

2006-02-28 14:58  zarko

	* MCReweight/data/: err_pot0.02_le010_farovernear.vec,
	  err_pot0.02_le010_lowint_farovernear.vec,
	  err_pot0.02_le010z170i_farovernear.vec,
	  err_pot0.02_le010z200i_farovernear.vec,
	  err_pot0.02_le100_farovernear.vec,
	  err_pot0.02_le250_farovernear.vec,
	  err_pot0.02_le_farovernear.vec:

	Set far/near error for pot to 0.

2006-02-28 14:43  evans

	* Calibrator/CalDrift.cxx:

	Debugging the test readout method CalDrift::CalibratedPH(...).

2006-02-28 05:50  zarko

	* MCReweight/: Zbeam.cxx, Zbeam.h:

	Calling GetWeight with nEffect=10 or nEffect=11 will now return the total
	error (all effects summed in quadrature). nEffect=10 includes hadron production
	error before hadron reweighting and nEffect=11 includes hadron production
	error after reweighting.

2006-02-28 05:45  zarko

	* MCReweight/data/: err_hadrprod_fitted_le010_far.vec,
	  err_hadrprod_fitted_le010_farovernear.vec,
	  err_hadrprod_fitted_le010_lowint_far.vec,
	  err_hadrprod_fitted_le010_lowint_farovernear.vec,
	  err_hadrprod_fitted_le010_lowint_near.vec,
	  err_hadrprod_fitted_le010_near.vec,
	  err_hadrprod_fitted_le010z170i_far.vec,
	  err_hadrprod_fitted_le010z170i_farovernear.vec,
	  err_hadrprod_fitted_le010z170i_near.vec,
	  err_hadrprod_fitted_le010z200i_far.vec,
	  err_hadrprod_fitted_le010z200i_farovernear.vec,
	  err_hadrprod_fitted_le010z200i_near.vec,
	  err_hadrprod_fitted_le100_far.vec,
	  err_hadrprod_fitted_le100_farovernear.vec,
	  err_hadrprod_fitted_le100_near.vec,
	  err_hadrprod_fitted_le250_far.vec,
	  err_hadrprod_fitted_le250_farovernear.vec,
	  err_hadrprod_fitted_le250_near.vec,
	  err_hadrprod_fitted_le_far.vec,
	  err_hadrprod_fitted_le_farovernear.vec,
	  err_hadrprod_fitted_le_near.vec:

	Updated hadron production errors after reweighting.

2006-02-28 05:34  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/log4cpp/: current.chain,
	  development.version:

	correct the PROD_DIR path.

2006-02-28 05:34  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/data/chetc.dat:

	Add a soft link back to the data file in the ../gcalor subdirectory.

2006-02-28 05:29  Sue Kasahara <schubert@hep.umn.edu>

	* CVSROOT/check_access:

	Add Jeff Hartnell to MCNtuple,TruthHelperNtuple,StandardNtuple and
	CandNtupleSR package author lists.

2006-02-28 05:27  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/log4cpp/: .cvsignore, current.chain,
	  development.table, development.version:

	start log4cpp setup.

2006-02-28 05:15  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/gcalor/: chetc.dat, gcalor_unix.F, readme.text,
	  xsneut.dat:

	Add GCALOR code and data files to new gcalor subdirectory. gcalor_unix.F
	has been modified from the original code downloaded from the gcalor
	web site in the following ways:
	 i)Subroutine names that are duplicates of those already in
	   geant321_vmc package have been prefaced with GC_.  Duplicates include
	   all routines in G3PTSim/neutron and G3PTSim/miguti.
	ii)Calls to geant3 routines have been modified to use the G3 prefix
	   associated with the geant321_vmc package version of geant3.
	iii)The searches for the required data files xsneut.dat and chetc.dat
	    have been modified to use look4file.

2006-02-28 04:33  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/GNUmakefile:

	Add "util" subdir to src directory list.

2006-02-28 04:30  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/util/: append_str.F, expand_env.F, lenocc1.F,
	  look4file.F:

	New directory to store routines used to locate data files.  The routines
	have been adopted "as is" from labyrinth/utilities, with the exception
	of look4file.F. look4file.F has been extended to search for the requested
	file in the following paths:
	  i)cwd
	 ii)auxpath_in
	iii)${SRT_PRIVATE_CONTEXT}/G3PTSim/data
	 iv)${SRT_PUBLIC_CONTEXT}/G3PTSim/data
	in the order stated.

2006-02-28 01:18  tjyang

	* MiniBooNEAna/: MNtp.cxx, MNtp.h, MNtpModule.cxx:

	modify the calculation of the earliest hit time

2006-02-27 21:45  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/framework.list:

	add Rustem to the unfortunate souls who receive commit messages
	(per his request, not pure spite on my part).

2006-02-27 20:45  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/Calibrator.cxx:

	Change the default drift to Justin's scheme.
	Change the default linearity to Simona/Tingjun's scheme.

2006-02-27 20:43  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/MuonDriftCalScheme.cxx:

	Dangit! Erased my last CVS commit message.
	Change the default reference date to Dec 01, 2005.

2006-02-27 20:40  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/: CalDrift.cxx, CalDrift.h:

	Added Get.. Set.. prefixes to calls. Inlined functions. Added leak detecection

2006-02-27 20:40  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/: MuonDriftCalScheme.cxx, MuonDriftCalScheme.h:

	First version of muon drift calibration.

2006-02-27 20:40  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/: LinkDef.h, macros/testDrift.C:

	[no log message]

2006-02-27 19:38  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* SpillTiming/macros/potAdder.C:

	Add a script for Mike: Uses the SpillTimeFinder and the BDSpillAccessor to add
	up POT for a given time range.

2006-02-27 19:36  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	fix the li topology crate boundary cut

2006-02-27 18:49  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	move message level down to debug

2006-02-27 17:54  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	fix cuts to not reject MC

2006-02-27 17:11  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/neugen3/: current.chain,
	  development.table, development.version, v3_3_6.table,
	  v3_3_6.version, v3_3_7.table, v3_3_7.version, v3_4_2.table,
	  v3_4_2.version:

	setups for development (current), v3_3_6/v3_3_7 (used for carrot) and
	v3_4_2 (used for current NeugenInterface/MCReweight).

2006-02-27 16:48  evans

	* Contrib/evans/ScintCal/: GNUmakefile, InfoChain.cxx, InfoChain.h,
	  LinkDef.h, ScintCalData.cxx, ScintCalData.h,
	  ScintCalDatabase.cxx, ScintCalDatabase.h, ScintCalEvent.cxx,
	  ScintCalEvent.h, ScintCalInfo.cxx, ScintCalInfo.h,
	  ScintCalModule.cxx, ScintCalModule.h, ScintCalPlane.cxx,
	  ScintCalPlane.h, ScintCalTimePeriod.cxx, ScintCalTimePeriod.h,
	  ScintCalTrack.cxx, ScintCalTrack.h, macros/AmalgInfoObjects.C,
	  macros/ChainInfoObjects.C, macros/DoStuff.C, macros/DrawGraphs.C,
	  macros/PutInDatabase.C, macros/TestDatabase.C:

	Adding the code I use to make the drift calibration numbers.

2006-02-27 16:31  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/neugen3/: .cvsignore, current.chain,
	  development.table, development.version:

	initial files for neugen UPS setup.

2006-02-27 16:16  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_root/.cvsignore:

	stuff for cvs to ignore.

2006-02-27 13:31  evans

	* Calibrator/macros/CreateCalDriftTable.C:

	Adding a macro to create the CALDRIFT database table.

2006-02-27 11:59  marshall

	* CandFitTrackCam/CandFitTrackCam.h:

	Removed two unused member variables

2006-02-27 11:58  marshall

	* CandFitTrackCam/: AlgFitTrackCam.cxx, AlgFitTrackCam.h:

	Now obtains range and dS measurements from the Swimmer, instead of using SetdS in AlgTrack

2006-02-27 09:35  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/scripts/cs_set_refresh_intervals.pm:

	Add CALDRIFT

2006-02-27 07:07  zarko

	* MCReweight/data/: err_hadrprod_fitted_le010_far.vec,
	  err_hadrprod_fitted_le010_farovernear.vec,
	  err_hadrprod_fitted_le010_lowint_far.vec,
	  err_hadrprod_fitted_le010_lowint_farovernear.vec,
	  err_hadrprod_fitted_le010_lowint_near.vec,
	  err_hadrprod_fitted_le010_near.vec,
	  err_hadrprod_fitted_le010z170i_far.vec,
	  err_hadrprod_fitted_le010z170i_farovernear.vec,
	  err_hadrprod_fitted_le010z170i_near.vec,
	  err_hadrprod_fitted_le010z200i_far.vec,
	  err_hadrprod_fitted_le010z200i_farovernear.vec,
	  err_hadrprod_fitted_le010z200i_near.vec,
	  err_hadrprod_fitted_le100_far.vec,
	  err_hadrprod_fitted_le100_farovernear.vec,
	  err_hadrprod_fitted_le100_near.vec,
	  err_hadrprod_fitted_le250_far.vec,
	  err_hadrprod_fitted_le250_farovernear.vec,
	  err_hadrprod_fitted_le250_near.vec:

	Updated hadrprod_fitted error vectors.

2006-02-26 21:28  tjyang

	* MiniBooNEAna/Fill_MBSpill.cxx:

	remove the duplicated database entry

2006-02-26 15:35  zarko

	* MCReweight/: Zbeam.cxx, Zbeam.h:

	Added hadron productin error after reweighting the MC as nEffect==8.
	Added le010z170i and le010z200i beams as iBeam==6 and iBeam==7.

2006-02-26 14:45  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/Calibrator.h:

	Make custom c'tor static.

2006-02-26 14:32  zarko

	* MCReweight/data/: err_bafflescr0.25_le010z170i_far.vec,
	  err_bafflescr0.25_le010z170i_farovernear.vec,
	  err_bafflescr0.25_le010z170i_near.vec,
	  err_bafflescr0.25_le010z200i_far.vec,
	  err_bafflescr0.25_le010z200i_farovernear.vec,
	  err_bafflescr0.25_le010z200i_near.vec,
	  err_beamwidth_le010z170i_far.vec,
	  err_beamwidth_le010z170i_farovernear.vec,
	  err_beamwidth_le010z170i_near.vec,
	  err_beamwidth_le010z200i_far.vec,
	  err_beamwidth_le010z200i_farovernear.vec,
	  err_beamwidth_le010z200i_near.vec,
	  err_hadrprod_fitted_le010_far.vec,
	  err_hadrprod_fitted_le010_farovernear.vec,
	  err_hadrprod_fitted_le010_lowint_far.vec,
	  err_hadrprod_fitted_le010_lowint_farovernear.vec,
	  err_hadrprod_fitted_le010_lowint_near.vec,
	  err_hadrprod_fitted_le010_near.vec,
	  err_hadrprod_fitted_le010z170i_far.vec,
	  err_hadrprod_fitted_le010z170i_farovernear.vec,
	  err_hadrprod_fitted_le010z170i_near.vec,
	  err_hadrprod_fitted_le010z200i_far.vec,
	  err_hadrprod_fitted_le010z200i_farovernear.vec,
	  err_hadrprod_fitted_le010z200i_near.vec,
	  err_hadrprod_fitted_le100_far.vec,
	  err_hadrprod_fitted_le100_farovernear.vec,
	  err_hadrprod_fitted_le100_near.vec,
	  err_hadrprod_fitted_le250_far.vec,
	  err_hadrprod_fitted_le250_farovernear.vec,
	  err_hadrprod_fitted_le250_near.vec,
	  err_hadrprod_fitted_le_far.vec,
	  err_hadrprod_fitted_le_farovernear.vec,
	  err_hadrprod_fitted_le_near.vec, err_hadrprod_le010z170i_far.vec,
	  err_hadrprod_le010z170i_farovernear.vec,
	  err_hadrprod_le010z170i_near.vec,
	  err_hadrprod_le010z200i_far.vec,
	  err_hadrprod_le010z200i_farovernear.vec,
	  err_hadrprod_le010z200i_near.vec,
	  err_horn1offset1mm_le010z170i_far.vec,
	  err_horn1offset1mm_le010z170i_farovernear.vec,
	  err_horn1offset1mm_le010z170i_near.vec,
	  err_horn1offset1mm_le010z200i_far.vec,
	  err_horn1offset1mm_le010z200i_farovernear.vec,
	  err_horn1offset1mm_le010z200i_near.vec,
	  err_horncurrcal2.ka_le010z170i_far.vec,
	  err_horncurrcal2.ka_le010z170i_farovernear.vec,
	  err_horncurrcal2.ka_le010z170i_near.vec,
	  err_horncurrcal2.ka_le010z200i_far.vec,
	  err_horncurrcal2.ka_le010z200i_farovernear.vec,
	  err_horncurrcal2.ka_le010z200i_near.vec,
	  err_horncurrdist_le010z170i_far.vec,
	  err_horncurrdist_le010z170i_farovernear.vec,
	  err_horncurrdist_le010z170i_near.vec,
	  err_horncurrdist_le010z200i_far.vec,
	  err_horncurrdist_le010z200i_farovernear.vec,
	  err_horncurrdist_le010z200i_near.vec,
	  err_pot0.02_le010z170i_far.vec,
	  err_pot0.02_le010z170i_farovernear.vec,
	  err_pot0.02_le010z170i_near.vec, err_pot0.02_le010z200i_far.vec,
	  err_pot0.02_le010z200i_farovernear.vec,
	  err_pot0.02_le010z200i_near.vec:

	Added error vectors for hadron production after hadron reweighting.
	Added error vectors for le010z170i and le010z200i beams.

2006-02-25 00:53  tjyang

	* MiniBooNEAna/: Fill_MBSpill.h, MBSpill.h, MBSpillAccessor.h,
	  MNtp.h:

	add some information

2006-02-25 00:48  tjyang

	* MiniBooNEAna/: LinkDef.h, MNtp.cxx, MNtp.h, MNtpModule.cxx,
	  MNtpModule.h, macros/makemntp.C:

	MNtp: a class to hold variables for MiniBooNE neutrino study
	MNtpModule: a job module to generate MNtp ntuples
	makemntp.C: a working job script

2006-02-25 00:47  George Irwin <gmieg@slac.stanford.edu>

	* AnalysisNtuples/Module/AnalysisModule.cxx:

	Change '#include "AnalysisNtuples/AnalysisModule.h"'
	to     '#include "AnalysisNtuples/Module/AnalysisModule.h"'

2006-02-24 23:02  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/WebDocs.html:

	Make note that "Run search" now works via SAM.  Restore link to old
	DbuSubRunSummary search which returns useful extra bits such as
	"RunComment".  Eventually we should have a page that interfaces to
	the new DbuDaqFileSummary/DbuRunSummary/DbuDaqConfigFilesText tables
	for these (and more) extras.

2006-02-24 22:26  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianModule.h,
	  HessianParameter.cxx, MarquardtFitModule.cxx,
	  MinosMinimization.cxx, MqfBeamInfo.cxx, MqfType.cxx:

	make sure you do the weighting right and take care of the neugen weighting
	for MODBYRS3 correctly. the weighting for SKZP too.

2006-02-24 22:25  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisModule.cxx,
	  macros/ncccSeparation.C:

	fix a few things to prevent core dumps and empty histograms - most noteably
	make sure that the IsGoodSpill is what checks the number of pot > 0.5e12
	as it has a flag in there to pass all mc events on through.  mc always has
	good beam

2006-02-24 21:21  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/QuadLinearityCalScheme.cxx:

	Fix divide-by-zero when beta is exactly zero.

2006-02-24 21:16  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx:

	fix a couple of typos

2006-02-24 21:11  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisUtils.cxx,
	  NCAnalysisUtils.h:

	finish adding cuts on LI in the far detector.

	also add methods to reweight to MODBYRS 3 and SKZP with default values

2006-02-24 20:55  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* JobControl/JobCFloatXImp.cxx:

	Add a floating point exception controller for Mac OSX.

	This may be PPC-specific; intel users will have to report on it's efficacy.
	It has to use a custom handler (don't know why, but only this works).  The handler
	reports the SIGFPE and does an immediate exit(1).

	GDB on Mac OSX does the right thing and shows you the error if it's running.

	As usual, my backdoor remains in place: to turn of FPEs (on Mac or Linux) just put the following in your
	.rootrc file:
	  Loon.fpe off

2006-02-24 17:57  evans

	* Calibrator/: CalDrift.cxx, CalDrift.h:

	Fixed a few references in CalDrift header file.

2006-02-24 17:40  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: AnalysisModule.cxx, AnalysisModule.h,
	  LinkDef.h:

	move AnalysisModule into the Module directory

2006-02-24 17:39  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/Module/: AnalysisModule.cxx, AnalysisModule.h,
	  LinkDef.h:

	move AnalysisModule into the Module directory where it belongs

2006-02-24 17:17  boehm

	* VertexFinder/: GNUmakefile, LinkDef.h, VertexFinder.cxx,
	  VertexFinder.h, VtxCluster.cxx, VtxCluster.h, VtxClusterList.cxx,
	  VtxClusterList.h, Module/GNUmakefile, Module/LinkDef.h,
	  Module/NtpVtxFinder.cxx, Module/NtpVtxFinder.h,
	  Module/ValVtxModule.cxx, Module/ValVtxModule.h,
	  Module/VtxFinderAna.cxx, Module/VtxFinderAna.h,
	  Module/VtxFinderData.cxx, Module/VtxFinderData.h,
	  Module/VtxModule.cxx, Module/VtxModule.h, Module/VtxRecord.cxx,
	  Module/VtxRecord.h, Module/VtxRecordAna.cxx,
	  Module/VtxRecordAna.h, macros/MakeVtxTree.C, macros/RunVtxAna.C:

	Updated version of VertexFinder and installing a set of new code that allows for testing and
	adjustment of vertexfinder settings.  By default the GNUmakefile will not descend into this
	directory as it will not be interesting to the average Minosian.

2006-02-24 16:14  mdier

	* BeamDataDbi/BMSpillFiller.cxx:

	The status bit for the horn off or on was filled with 0 when horn current is below 175kA. Changed this to 150kA

2006-02-24 11:34  evans

	* Calibrator/: CalDrift.cxx, CalDrift.h:

	Making VldContext a reference in CalibratedPH(...).

2006-02-23 23:36  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	use the right variables to do the xf-pt reweighting

2006-02-23 23:30  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpTruthInfoBeam.cxx, ANtpTruthInfoBeam.h,
	  Module/ANtpInfoObjectFillerBeam.cxx:

	add in the relevant information for doing the beam reweighting

2006-02-23 23:17  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MarquardtFitModule.h,
	  MinosMinimization.cxx, MinosMinimization.h, MqfBeamInfo.cxx,
	  MqfBeamInfo.h, MqfEnergyBinInfo.cxx, MqfEnergyBinInfo.h,
	  MqfType.cxx, MqfType.h:

	whew - finished adapting the code to handle multiple beam configurations
	and still keep all the functionality it had before.  i dont have the heart
	to test it just yet.

2006-02-23 18:25  arms

	* RootUtil/TPSTest/TPSTest.cxx:

	Add some extra protection against crashes in TMath::PoissonI() from large values of n and/or mu.

2006-02-23 18:07  litchfld

	* AnalysisNtuples/Module/ANtpInfoObjectFillerNC.cxx:

	make definition of shower.totalStrips consistent between basic and NC Analysis Ntuples

2006-02-23 15:57  evans

	* Calibrator/: CalDrift.cxx, CalDrift.h:

	An improved verion of the CalibratedPH() function.

2006-02-23 15:55  arms

	* MCMonitor/: MCMonitor.cxx, MCMonitorHistograms.cxx,
	  MCMonitorHistograms.h:

	Add nslice plot; reduce the range on nevent/nslice plot.

2006-02-23 15:51  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	forgot to make IsStoppingBeamMuonCC a member function in .h file - syntax
	error fix in .cxx file

2006-02-23 15:48  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h,
	  NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	some more cuts for doing the cross check of the simultaneous fit to near
	and far data

2006-02-23 15:45  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCType.h:

	add variable to flag with NC/CC extraction to use

2006-02-23 15:22  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MqfBeamInfo.cxx, MqfBeamInfo.h:

	add objects that describe different beam configurations.  each one holds
	a vector of MqfEnergyBinInfo objects.  the MqfBeamInfo objects are passed
	to the MinosMinimization object for it to fill an internal vector of
	MqfEnergyBinInfo objects.  hopefully this change makes the book keeping
	much easier.

2006-02-23 15:20  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianModule.h,
	  HessianParameter.cxx, HessianParameter.h, LinkDef.h,
	  MarquardtFitModule.cxx, MarquardtFitModule.h,
	  MinosMinimization.cxx, MinosMinimization.h, MqfEnergyBinInfo.cxx,
	  MqfEnergyBinInfo.h, MqfType.cxx, MqfType.h:

	rework the package to all for multiple beam configurations, different
	NC/CC extraction methods

2006-02-22 23:52  George Irwin <gmieg@slac.stanford.edu>

	* Filtration/FiltMBSpillModule.cxx:

	Fix compilation errors and warnings.

2006-02-22 22:38  tjyang

	* NueAna/Display/: NueDisplayModule.cxx, NueDisplayModule.h:

	add Mike's PlaneOutline, this is really nice!

2006-02-22 21:27  tjyang

	* MiniBooNEAna/: Fill_MBSpill.cxx, MBSpillAccessor.h,
	  macros/create_mbspill.mysql, macros/fill_mbspill.C:

	add the macros

2006-02-22 21:23  tjyang

	* MiniBooNEAna/: Fill_MBSpill.cxx~, Fill_MBSpill.h~, GNUmakefile~,
	  LinkDef.h~, MBSpill.cxx~, MBSpill.h~, MBSpillAccessor.cxx~,
	  MBSpillAccessor.h~:

	remove *~

2006-02-22 21:23  boehm

	* Production/Dev/PreCedar/:
	  CandChopTests/reco_MC_far_Chopped_R1_18_2.C,
	  CandChopTests/reco_MC_near_Chopped_R1_18_3.C,
	  CandChopTests/reco_far_All_Chopped_R1_18_2.C,
	  CandChopTests/reco_far_Alt_CandSub_Spill_Blind_Chopped_R1_18_2.C,
	  CandChopTests/reco_near_Cosmic_Scaled_Chopped_R1_18_3.C,
	  CandChopTests/reco_near_Spill_Chopped_R1_18_3.C,
	  CandEventTests/reco_MC_far_CandEvent_Dev.C,
	  CandEventTests/reco_MC_near_CandEvent_Dev.C,
	  CandFitTrackCamTests/reco_MC_far_CamFit_Dev.C,
	  CandFitTrackCamTests/reco_MC_near_CamFit_Dev.C,
	  CandFitTrackCamTests/reco_far_Alt_All_CamFit_Dev.C,
	  CandFitTrackCamTests/reco_far_Alt_All_CamFit_R1_21.C,
	  CandFitTrackCamTests/reco_far_Alt_CandSub_Spill_Blind_CamFit_Dev.C,
	  CandFitTrackCamTests/reco_near_Cosmic_Scaled_CamFit_Dev.C,
	  CandFitTrackCamTests/reco_near_Spill_CamFit_Dev.C,
	  MC/reco_MC_far_Cosmic_Dev.C, MC/reco_MC_far_Dev.C,
	  MC/reco_MC_near_Dev.C:

	In order to make all of the testing scripts available to collaboration and in order to provide record keeping of the scripts as they are developed a new directory has been created to house those scripts not strictly tied to a Production release.

	Scripts used in the CandChop, Cambridge Fitter are located here as well as scripts noting expected code changed for the Cedar release.

2006-02-22 21:21  tjyang

	* MiniBooNEAna/: Fill_MBSpill.cxx, Fill_MBSpill.cxx~,
	  Fill_MBSpill.h, Fill_MBSpill.h~, GNUmakefile, GNUmakefile~,
	  LinkDef.h, LinkDef.h~, MBSpill.cxx, MBSpill.cxx~, MBSpill.h,
	  MBSpill.h~, MBSpillAccessor.cxx, MBSpillAccessor.cxx~,
	  MBSpillAccessor.h, MBSpillAccessor.h~:

	MBSpill.h MBSpill.cxx: Database table for saving MiniBooNE spill information.
	Fill_MBSpill.h Fill_MBSpill.cxx: Function to fill the table MBSPILL based on
	the text files from Steve Brice.
	MBSpillAccessor.h MBSpillAccessor.cxx: Facility to get spill information based
	on a give time stamp, this is a copy of BDSpillAccessor with the simple
	replacement BD->MB.
	thanks Mark Dierckxsens for useful discussion.

2006-02-22 21:01  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	start MiniBooNEAna package for murgia/tjyang/hjkang.

2006-02-22 20:57  Robert Hatcher <rhatcher@fnal.gov>

	* MiniBooNEAna/.cvsignore:

	Initial revision

2006-02-22 20:57  Robert Hatcher <rhatcher@fnal.gov>

	* MiniBooNEAna/.cvsignore:

	start new package for murgia

2006-02-22 19:29  arms

	* RootUtil/TPSTest/TPSTest.cxx:

	Fix a div by zero bug.

2006-02-22 19:07  evans

	* Calibrator/: CalDrift.cxx, CalDrift.h:

	Modified CalibratedPH(...) to allow detector to be specified.

2006-02-22 18:59  mdier

	* BeamDataUtil/: BMSpillAna.cxx, BMSpillAna.h,
	  test/bmspillana_db_test.C:

	Now you can just give the snarl time, instead of giving the time difference. Hope this will reduce the confusion about all the different 'spill' times.

2006-02-22 18:02  mdier

	* NueAna/: ANtpEventInfoAna.cxx, CompareMD.cxx:

	Port Brian's changes to ANtpEventInfo class into NueAna package (event --> index)

2006-02-22 17:54  musser

	* CandNtupleSR/Module/NtpSRModule.cxx:

	fix CandShield interface issue

2006-02-22 17:43  evans

	* Calibrator/: CalDrift.cxx, CalDrift.h:

	Adding DbiTableRow class 'CalDrift' that reads out the drift calibration database.

2006-02-22 17:39  evans

	* Calibrator/LinkDef.h:

	Adding the DbiTableRow class 'CalDrift' that reads out the drift calibration database.

2006-02-22 17:35  Nick West <n.west1@physics.oxford.ac.uk>

	* CandNtupleSR/Module/NtpSRModule.cxx:

	Commit Pedro Ochoa's update: Respond to change in API:-
	ShieldGeom now takes a VldContext instead of a VldTimeStamp.

2006-02-22 17:32  asousa

	* CVSROOT/framework.list:

	Fix typo in e-mail address.

2006-02-22 17:31  asousa

	* CVSROOT/check_access:

	Giving Justin write permissions to Calibrator.

2006-02-22 17:15  Brian Rebel <brebel@fnal.gov>

	* Mad/MadAnalysis.cxx:

	fix the code to account for the ANtpEventInfo::event -> index change

2006-02-22 16:31  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/Module/CondensedNtpModule.cxx:

	adjust for ANtpEventInfo::event -> index change

2006-02-22 16:07  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpEventInfo.cxx, ANtpEventInfo.h,
	  Module/ANtpInfoObjectFiller.cxx:

	change ANtpEventInfo::event to ANtpEventInfo::index

2006-02-22 13:53  raufer

	* NCUtils/NCAnalysisCuts.cxx:

	Found bug in InBeamFiducialVolumeOx():

	Was doing FD fiducial cuts on Near Detector and vice versa. Changed two occurences of != to ==. This must have happened when combining the originally separate methods into one.

2006-02-22 12:12  asousa

	* CVSROOT/framework.list:

	Adding Justin to the minossoft cvs mailing list.

2006-02-22 09:24  Nick West <n.west1@physics.oxford.ac.uk>

	* setup/setup_minossoft_oxford.csh:

	Dismantle RedHat/Scientific Linux dual support

2006-02-22 05:07  jpochoa

	* CandShield/: ShieldGeom.cxx, ShieldGeom.h:

	ShieldGeom now takes a VldContext instead of a VldTimeStamp.

2006-02-22 03:55  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/macro/ptsim_MC_far_R1_20.C:

	Demo macro to just run MC portion of job.

2006-02-22 03:54  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/: PTSimApplication.cxx, PTSimApplication.h,
	  PTSimModule.cxx, macro/PTSim_testG3.C,
	  macro/ptsim_reco_MC_far_R1_20.C:

	Add configuration flag "UseGeoAll" to allow user to configure whether
	GeoGeometry will be used only for PTSim, with Ugli used for all
	other processing including BField (UseGeoAll=0), or if GeoGeometry
	will be used throughout processing (UseGeoAll=1).  UseGeoAll=1
	is the default, but the demo scripts have been altered to set UseGeoAll to
	0 for now.

2006-02-22 01:22  zarko

	* MCReweight/: Zbeam.cxx, Zbeam.h:

	Added the reweighting for low intensity LE10 (Ibeam=5)
	During this run beam was narrower than in current MC,
	so as for ME and HE setting ns=0 for beamwidth will
	reweight to narrower beam.

2006-02-22 00:52  admarino

	* Contrib/admarino/ncbkg_doc/: main_ncbkg.tex, nc_bkg.tex,
	  nc_norm.tex, nc_summary.tex, pan_data_pid_ebins_1.eps,
	  pan_data_pid_ebins_6.eps, pan_data_pid_scales_1.eps,
	  pan_data_pid_scales_6.eps:

	added preliminary numbers for the estimated background.

	updated numbers for normalization uncertainties to those obtained with the
	CC track-removed corrections to the pdf shape.

2006-02-22 00:28  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.h:

	default to beamType =0 for FindBeamWeight - corresponds to LE beam

2006-02-22 00:26  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	handle different beam configurations when doing the beam reweighting for
	horn current uncertainties, etc

2006-02-21 23:45  zarko

	* MCReweight/data/: err_bafflescr0.25_le010_lowint_far.vec,
	  err_bafflescr0.25_le010_lowint_farovernear.vec,
	  err_bafflescr0.25_le010_lowint_near.vec,
	  err_beamwidth_le010_lowint_far.vec,
	  err_beamwidth_le010_lowint_farovernear.vec,
	  err_beamwidth_le010_lowint_near.vec,
	  err_hadrprod_le010_lowint_far.vec,
	  err_hadrprod_le010_lowint_farovernear.vec,
	  err_hadrprod_le010_lowint_near.vec,
	  err_horn1offset1mm_le010_lowint_far.vec,
	  err_horn1offset1mm_le010_lowint_farovernear.vec,
	  err_horn1offset1mm_le010_lowint_near.vec,
	  err_horncurrcal2.ka_le010_lowint_far.vec,
	  err_horncurrcal2.ka_le010_lowint_farovernear.vec,
	  err_horncurrcal2.ka_le010_lowint_near.vec,
	  err_horncurrdist_le010_lowint_far.vec,
	  err_horncurrdist_le010_lowint_farovernear.vec,
	  err_horncurrdist_le010_lowint_near.vec,
	  err_pot0.02_le010_lowint_far.vec,
	  err_pot0.02_le010_lowint_farovernear.vec,
	  err_pot0.02_le010_lowint_near.vec:

	Added errors for le010 low intensity run. Beam width during that run was
	narrower than it is in current MC. As for ME and HE this function will
	reweight to narrower beam with choice of ns=0. Choosing ns>0 will reweight to
	even narrower beam.

2006-02-21 23:13  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisUtils.cxx:

	make sure the shower you are finding the energy for is a good one.

	return 0. for the energy if it isnt

2006-02-21 23:12  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/: LinkDef.h, QuadLinearityCalScheme.cxx,
	  QuadLinearityCalScheme.h:

	Add the QuadLinearity scheme, which will do the ND nonlinearity correction by using the quadratic fit.
	First version.

2006-02-21 22:10  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	fix the IsGoodBeamEventCC method to also include the criteria for
	recovering events in the ND where trk.fit.pass < 1

2006-02-21 22:02  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpTrackInfo.cxx, ANtpTrackInfo.h,
	  Module/ANtpInfoObjectFiller.cxx:

	add some variables to the base class:

	begPlaneU(V)
	endPlaneU(V)

	in order to be able to match david's cuts

	also fill these in the filler

2006-02-21 21:25  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h,
	  NCAnalysisModule.cxx, NCAnalysisUtils.cxx, NCAnalysisUtils.h,
	  NCType.h:

	add a couple more methods to select events/snarls/spills the way the CC
	analysis does as documented in MINOS-doc-1342

	also add a method to set the algorithms to the CC ones

2006-02-21 21:18  arms

	* RootUtil/GNUmakefile:

	Add SUBDIRS = TPSTest, so libTPSTest is built with along with libRootUtil.

2006-02-21 20:59  arms

	* RootUtil/GNUmakefile:

	Need to fix a bug....

2006-02-21 20:56  arms

	* RootUtil/GNUmakefile:

	Add TPSTest to build structure on a gmake RootUtil.all command

2006-02-21 20:47  admarino

	* WebDocs/gminos_jobs.html:

	first version

2006-02-21 19:42  Robert Hatcher <rhatcher@fnal.gov>

	* setup/setup_minossoft_FNALU_parser.sh:

	clean up old kruft.  no longer depend on $UPS_FLAVOR_2 being set (apparently
	not set by setup of ups itself as I thought, but "setup login" which not
	everyone does).

2006-02-21 19:12  tjyang

	* NueAna/Display/NueDisplayModule.cxx:

	change vector<float> to vector<double> for the timing.

2006-02-21 19:06  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* PulserCalibration/ndQuadFit.C:

	Add my script for generating quadratic fits to the ND nonlinearity data. Code is crude but workable.

2006-02-21 18:51  Robert Hatcher <rhatcher@fnal.gov>

	* EventKinematics/doc/: nu_evt_module.ppt.pdf,
	  nu_evt_module.ppt.sxi:

	RWH talk from Jan'06 collaboration meeting.

2006-02-21 17:52  Robert Hatcher <rhatcher@fnal.gov>

	* setup/: setup_minossoft_FNALU.csh, setup_minossoft_FNALU.sh,
	  setup_minossoft_FNALU_parser.sh:

	New FNALU setup scripts.

2006-02-21 17:47  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_config/v01.table:

	under tcsh (but not bash) the unsetup of a local temp env variable
	would cause problems on the second setup ... just make it a non-temp.

2006-02-21 17:44  mdier

	* NueAna/BeamMonAna.cxx:

	Use tortgt as a primary source for pot counting instead of trtgtd, since the former one has calibration applied.

2006-02-21 17:21  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_offline/: R1.10.table,
	  R1.11.table, R1.12.table, R1.13.table, R1.14.table, R1.15.table,
	  R1.16.table, R1.17.table, R1.18.1.table, R1.18.2.table,
	  R1.18.table, R1.20.table, R1.21.table, R1.6.table, R1.7.table,
	  R1.8.table, R1.9.table, S06-02-02-R1-21.table,
	  S06-02-16-R1-21.table, development.table:

	somehow SetupRequired(sam) got lost ...

2006-02-21 16:20  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_config/v01.table:

	fix up $SCRATCH setting on minos cluster (I'm sure it worked last night!)

2006-02-21 14:32  cbs

	* Contrib/cbs/PlotOrg/: Plot1DHistogram.cxx, Plot1DHistogram.h,
	  Plot2DHistogram.cxx, PlotDirectory.cxx, PlotDirectory.h,
	  PlotMaker.cxx, PlotManager.cxx, PlotManager.h,
	  macros/RecoFile_CC.C:

	updates

2006-02-21 05:51  boehm

	* NueAna/MdaDiscrimAna.h:

	Functionless declarations cause library linking errors, so dummy functions have been added.

2006-02-21 03:11  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_offline/: R1.15.table,
	  R1.15.version:

	R1.15 was built with both GCC_3_4 and GCC_3_3 (which also use different
	versions of minos_extern as well).

2006-02-21 03:07  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_offline/: R1.10.table,
	  R1.10.version, R1.11.table, R1.11.version, R1.12.table,
	  R1.12.version, R1.13.table, R1.13.version, R1.14.table,
	  R1.14.version, R1.15.table, R1.15.version, R1.16.table,
	  R1.16.version, R1.17.table, R1.17.version, R1.18.1.table,
	  R1.18.1.version, R1.18.2.table, R1.18.2.version, R1.18.table,
	  R1.18.version, R1.20.table, R1.20.version, R1.21.table,
	  R1.21.version, R1.6.table, R1.6.version, R1.7.table,
	  R1.7.version, R1.8.table, R1.8.version, R1.9.table, R1.9.version,
	  S06-02-02-R1-21.table, S06-02-02-R1-21.version,
	  S06-02-16-R1-21.table, S06-02-16-R1-21.version,
	  development.table, development.version:

	initial version/table files for all currently known FNALU builds
	(hopefully some are even right).

2006-02-21 03:06  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_offline/.cvsignore:

	initial .cvsignore

2006-02-21 03:04  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_config/v01.table:

	some cleanup and reordering.

2006-02-21 03:04  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_extern/: bleeding-edge.table,
	  v01.table, v02.table, v03.table:

	all tables now set UNIXODBC_DIR and SIGC_DIR.

2006-02-21 03:03  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_root/v4-01-04.table:

	typo in the dcap requiredfor v4-01-04

2006-02-21 01:47  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_config/v01.table:

	flush out with addition env variables

2006-02-21 01:12  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_config/: .cvsignore,
	  current.chain, v01.table, v01.version:

	global offline config "product"

2006-02-21 00:04  zarko

	* MCReweight/: Zfluk.cxx, Zfluk.h:

	Modified Files:
	 	Zfluk.cxx Zfluk.h

	Added function GetPTshift(par). This uses the fluka05ptxf.root file that should
	be in MCReweight/data. This function returns shift in mean pT for a given set
	of parameters, for a parameterization that was set with UseParameterization.

2006-02-20 23:54  zarko

	* MCReweight/data/fluka05ptxf.root:

	Added Files:
	 	data/fluka05ptxf.root

	This file is used by Zfluk to calculate the mean pT

2006-02-20 23:38  mdier

	* BeamDataMonitoring/scripts/run_bdq_link.sh:

	small bug fixes

2006-02-20 23:38  mdier

	* BeamDataMonitoring/scripts/run_bdq_fnal_cron.sh:

	adding a cron script to run the Beam Data Quality Histogram maker on minos-acnet

2006-02-20 22:52  admarino

	* Contrib/admarino/ncbkg_doc/: bibliography.tex, main_ncbkg.tex,
	  nc_bkg.tex, nc_intro.tex, nc_norm.tex, nc_summary.tex:

	Updated tex files with some grmmatical tweaks.
	Also updated some of the references and put in updated numbers for the
	beam weighting parameters.

2006-02-20 22:41  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/minos_root/: v5-08-00-tspectrum.table,
	  v5-08-00-tspectrum.version, v5-08-00b-tspectrum.table,
	  v5-08-00b-tspectrum.version:

	v5-08-00-tspectrum should have been v5-08-00b-tspectrum

2006-02-20 18:16  hartnell

	* MeuCal/macros/nearValidate/mXY.C:

	Fix bug that plotted the u-view plot twice...

2006-02-20 18:00  hartnell

	* MeuCal/macros/: FileListSpecial.C, nearValidate/mPlanes.C,
	  nearValidate/mXY.C:

	More blessed plot tinkering... now makes smaller versions and dumps all
	the different formats to disk.

2006-02-20 17:32  litchfld

	* AnalysisNtuples/Module/ANtpInfoObjectFillerNC.cxx:

	Fix typo in ANtpInfoObjectFillerNC::FillShowerInfoNC()
	(variable transverseRMSU was not being filled)

2006-02-20 16:55  admarino

	* Contrib/admarino/ncbkg_doc/main_ncbkg.tex:

	first version

2006-02-20 16:45  admarino

	* Contrib/admarino/ncbkg_doc/: bibliography.tex, nc_bkg.tex,
	  nc_intro.tex, nc_norm.tex, nc_summary.tex,
	  pan_data_pid_ebins_1.eps, pan_data_pid_ebins_6.eps,
	  pan_data_pid_scales_1.eps, pan_data_pid_scales_6.eps,
	  pan_mctest_ebins_6.eps, pan_mctest_scales_6.eps, pid_ccnc_mc.eps,
	  unsmeared.eps:

	first version of NC background position paper

2006-02-20 08:02  tjyang

	* NueAna/Display/: NueDisplayModule.cxx, NueDisplayModule.h:

	add dt vs ds information for tracks

2006-02-19 21:39  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/: GNUmakefile, doc/README,
	  macro/PTSim_g3libs.C, test/PTSimValidateInit.C:

	Update ParticleTransportSim package to reflect use of minossoft
	library libG3PTSim in place of external geant321+_vmc package.

2006-02-19 21:34  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/fluka/berttp.F:

	Modify Fluka search path for flukaaf.dat to use ${CERN_ROOT}/lib if G3SYS
	has not been set.  This is to be consistent with MICAP search path for
	xsneut95.dat, and avoids the need for the additional env variable.

2006-02-19 20:20  mdier

	* BeamDataMonitoring/scripts/: run_bdata_quality.sh,
	  run_bdq_link.sh:

	Adding scripts to run the Beam Data Quality histogram maker on minos-acnet.

2006-02-18 22:56  Minos CVS group account.  Do not commit from here!

	* Contrib/Documents/CalibBoxOpenDoc/calib.tex:

	Changed the emphasis on how we use the MEU number in sections 5.2, 7.2, 7.3 and 7.4

2006-02-18 22:55  Minos CVS group account.  Do not commit from here!

	* Contrib/Documents/CalibBoxOpenDoc/:
	  Far1stAug037thDec05DriftCropped.eps, BlessedDriftNDonly.eps:

	[no log message]

2006-02-17 17:26  cbs

	* Contrib/cbs/PlotOrg/PlotMaker.cxx:

	bug fix

2006-02-17 17:02  admarino

	* WebDocs/WebDocs.html:

	Updated gnumi link.
	Added gminos_jobs link.

2006-02-17 16:57  Liz Buckley-Geer <buckley@fnal.gov>

	* CVSROOT/check_access:

	Add admarino to WebDocs

2006-02-17 16:35  asousa

	* NueAna/: LinkDef.h, MdaDiscrim.cxx, MdaDiscrim.h,
	  MdaDiscrimAna.cxx, MdaDiscrimAna.h, NueRecord.cxx, NueRecord.h,
	  NueRecordAna.cxx, NueRecordAna.h:

	Adding skeleton for a class that computes posterior event nue PIDs and classifies those events using MDA discriminators obtained via SAS.

2006-02-17 16:17  Nick West <n.west1@physics.oxford.ac.uk>

	* JobControl/JobCEnv.cxx:

	Stop frightening users with messages about exception handling by
	directly calling the exception setting routine

	  G__SetCatchException(int)

	rather than using the CINT API

	  .exception

	which prints the new value set.

2006-02-17 15:11  cbs

	* Contrib/cbs/PlotOrg/PlotMaker.cxx:

	updates

2006-02-17 06:23  cbs

	* Contrib/cbs/PlotOrg/macros/RecoFile_CC.C:

	plot making code for CC cuts

2006-02-17 05:58  cbs

	* Contrib/cbs/PlotOrg/: Plot1DHistogram.cxx, Plot2DHistogram.cxx,
	  Plot2DHistogram.h, PlotDirectory.cxx, PlotMaker.cxx, PlotMaker.h,
	  PlotManager.cxx, PlotManager.h:

	[no log message]

2006-02-16 20:56  murgia

	* Filtration/FiltMBSpillModule.h:

	[no log message]

2006-02-16 20:56  murgia

	* Filtration/FiltMBSpillModule.cxx:

	Select ND snarls consistent with MiniBooNE spills.

2006-02-16 19:26  kordosky

	* Mad/: MadMKAnalysis.cxx, MadMKAnalysis.h:

	upgrades

2006-02-16 18:34  arms

	* MCMonitor/macro/outputMCMonitorPlots.C:

	Add summary output to the end of the macro.

2006-02-16 18:19  asousa

	* ControlRoomSoftware/CRLForms/OmCheckListFar.htm:

	Adding 4 new checks to the Crate Monitor section related to VARC and
	TRC monitoring. The corresponding "ideal" plots were added to the OM Gallery.

2006-02-16 17:33  George Irwin <gmieg@slac.stanford.edu>

	* setup/packages-S06-02-16-R1-21:

	First commit

2006-02-16 17:33  kordosky

	* Mad/macros/MakePanMK.C:

	use new QE pdfs by default

2006-02-16 17:32  kordosky

	* Mad/data/QEpdfs_R1_18_2.root:

	new pdfs for the QE pid

2006-02-16 08:04  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/: minos_root/bleeding-edge.table,
	  minos_root/v3-05-05.table, minos_root/v3-05-07.table,
	  minos_root/v3-10-01.table, minos_root/v3-10-02.table,
	  minos_root/v4-00-02.table, minos_root/v4-00-03A.table,
	  minos_root/v4-00-04.table, minos_root/v4-00-08.table,
	  minos_root/v4-00-08f.table, minos_root/v4-01-02.table,
	  minos_root/v4-01-04.table, minos_root/v4-02-00.table,
	  minos_root/v4-04-02b.table, minos_root/v4-04-02f.table,
	  minos_root/v5-08-00-tspectrum.table,
	  minos_extern/bleeding-edge.table, minos_extern/v01.table,
	  minos_extern/v02.table, minos_extern/v03.table:

	When setting up gcc use -j to avoid setting up (ancient) "gdb".

2006-02-16 03:48  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/check_access:

	add murgia to Filtration package so she can commit miniboone spill fiter.

2006-02-15 20:39  kordosky

	* Mad/: MadMKAnalysis.cxx, MadMKAnalysis.h:

	move a bunch of trunk changes onto the new branch

2006-02-15 20:16  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	New packages EventMerge and MuonRemoval for Caius.  Do my bit at
	improving the alphabetization of the list.

2006-02-15 20:13  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: EfficiencyPurityModule.cxx,
	  EfficiencyPurityModule.h:

	add method to draw single efficiency plots

2006-02-15 19:59  kordosky

	* Mad/MadDpID.cxx:

	remove fiducial requirement to match jan-06 branch.

2006-02-15 19:52  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	fix the fiducial volume algorithm for BR near detector events

2006-02-15 18:53  Robert Hatcher <rhatcher@fnal.gov>

	* EventMerge/.cvsignore:

	New EventMerge package for Caius.

2006-02-15 18:52  Robert Hatcher <rhatcher@fnal.gov>

	* MuonRemoval/.cvsignore, EventMerge/.cvsignore:

	Initial revision

2006-02-15 18:52  Robert Hatcher <rhatcher@fnal.gov>

	* MuonRemoval/.cvsignore:

	Second try at new MuonRemoval package for Caius.

2006-02-15 18:41  Brett Viren <bv@bnl.gov>

	* BeamDataMonitoring/: BDataQualityModule.cxx,
	  CDFMonitoringModule.cxx, GNUmakefile,
	  scripts/bdata_quality_libs.C, scripts/bdata_quality_plot.C:

	Old additions never committed

2006-02-15 18:36  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/fnal_ups/: minos_extern/bleeding-edge.table,
	  minos_extern/bleeding-edge.version, minos_extern/v01.table,
	  minos_extern/v01.version, minos_extern/v02.table,
	  minos_extern/v02.version, minos_extern/v03.table,
	  minos_extern/v03.version, minos_root/bleeding-edge.table,
	  minos_root/bleeding-edge.version, minos_root/v3-05-05.table,
	  minos_root/v3-05-05.version, minos_root/v3-05-07.table,
	  minos_root/v3-05-07.version, minos_root/v3-10-01.table,
	  minos_root/v3-10-01.version, minos_root/v3-10-02.table,
	  minos_root/v3-10-02.version, minos_root/v4-00-02.table,
	  minos_root/v4-00-02.version, minos_root/v4-00-03A.table,
	  minos_root/v4-00-03A.version, minos_root/v4-00-04.table,
	  minos_root/v4-00-04.version, minos_root/v4-00-08.table,
	  minos_root/v4-00-08.version, minos_root/v4-00-08f.table,
	  minos_root/v4-00-08f.version, minos_root/v4-01-02.table,
	  minos_root/v4-01-02.version, minos_root/v4-01-04.table,
	  minos_root/v4-01-04.version, minos_root/v4-02-00.table,
	  minos_root/v4-02-00.version, minos_root/v4-04-02b.table,
	  minos_root/v4-04-02b.version, minos_root/v4-04-02f.table,
	  minos_root/v4-04-02f.version,
	  minos_root/v5-08-00-tspectrum.table,
	  minos_root/v5-08-00-tspectrum.version:

	Attempt to "rationalize" FNALU setup by using UPS.

2006-02-15 18:30  Robert Hatcher <rhatcher@fnal.gov>

	* Contrib/rhatcher/.cvsignore:

	stuff to ignore.

2006-02-15 16:39  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: EventRatePlotModule.cxx,
	  EventRatePlotModule.h:

	make the boundaries for the months and the labels into data member vectors

2006-02-15 15:57  kordosky

	* DataUtil/: EnergyCorrections.cxx, EnergyCorrections.h:

	add correction from for momentum via curvature as advocated in 1430-v2. Only modifies momenta of positively charged tracks.

2006-02-14 23:28  Liz Buckley-Geer <buckley@fnal.gov>

	* WebDocs/WebDocs.html:

	try again - replace run search with SAM run search

2006-02-14 23:26  Liz Buckley-Geer <buckley@fnal.gov>

	* WebDocs/WebDocs.html:

	replace run search with SAM run search

2006-02-14 16:03  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* CVSROOT/check_access:

	Add Pedro to the Calibrator so he can do shield stuff.

2006-02-14 16:00  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/PulserTimeCalScheme.cxx:

	Turn walk correction on by default.

2006-02-14 13:04  Nick West <n.west1@physics.oxford.ac.uk>

	* RDBC/rdbc/TSQLUrl.cxx:

	Document my own indolence.

2006-02-14 12:49  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/doc/ChangeLog:

	Global Exception Log + DbiExceptionLog with each DbiResult.

2006-02-14 12:48  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/DbiTableProxyRegistry.cxx:

	Print out Global Exception Log before terminating.

2006-02-14 12:48  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/DbiTableProxy.cxx:

	After building DbiResult, set up its DbiExceptionLog.

2006-02-14 12:47  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: Dbi.cxx, DbiStatement.cxx:

	When printing warnings at Msg::kWarning and above, add
	to the Global Exception Log.

2006-02-14 12:47  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: DbiResult.cxx, DbiResult.h:

	API Change:
	  Add   const DbiExceptionLog& GetExceptionLog() const;
	        void CaptureExceptionLog(UInt_t startFrom);
	        DbiExceptionLog fExceptionLog;
	A DbiResult now has an exception log which is built using the
	latest entries of the Global Exception Log.

2006-02-14 12:47  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: DbiExceptionLog.cxx, DbiExceptionLog.h:

	API Change:
	  Add  void Print() const;
	       UInt_t Size() const;
	       void Copy(DbiExceptionLog& that, UInt_t start=0) const;
	       void AddEntry(const char* errMsg);
	       static DbiExceptionLog& GetGELog()
	       static DbiExceptionLog fgGELog;
	Extend to allow adding of error messages and other DbiExceptionLogs
	Add a Global Exception Log to record all exceptions.

2006-02-14 12:43  Nick West <n.west1@physics.oxford.ac.uk>

	* UserManualDoc/: doc/ChangeLog, src/database_interface.tex:

	DatabaseInterface: Add sections: Error Logging, Going Native

2006-02-14 04:48  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/GNUmakefile:

	Clean up SRT compatible GNUmakefile.  GNUmakefile is based on
	geant321+_vmc Makefile provided with package.  It builds a
	minossoft library "libG3PTSim.so" which can be loaded in place
	of external package library when running PTSim with Geant3 option.
	  This GNUmakefile, my first venture into attempting to understand
	SRT make, could benefit from expert eyes.

2006-02-14 03:23  arms

	* MCMonitor/macro/outputMCMonitorPlots.C:

	Added fail directory to root output file, fail output ps file, and an index to the normal output ps file, all highlighting comparisons that are statistically different (fail).

2006-02-14 01:53  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/doc/: gedoc, update97a.txt, cmze/Versions/v3_15,
	  cmze/Versions/v3_16, cmze/Versions/v3_21, cmzf/Versions/v3_16,
	  cmzf/Versions/v3_21, cmzg/Versions/v3_12, cmzg/Versions/v3_13,
	  cmzg/Versions/v3_14, cmzg/Versions/v3_15, cmzg/Versions/v3_16,
	  cmzg/Versions/v3_21, cmzh/Versions/v3_14, cmzh/Versions/v3_15,
	  cmzh/Versions/v3_16, cmzh/Versions/v3_21, cmzm/Versions/v3_16,
	  cmzm/Versions/v3_21, cmzt/Versions/v3_13, cmzt/Versions/v3_14,
	  cmzt/Versions/v3_15, cmzt/Versions/v3_16, cmzt/Versions/v3_21,
	  cmzx/Versions/v3_14, cmzx/Versions/v3_15, cmzx/Versions/v3_16,
	  cmzx/Versions/v3_21, ghdoc/blank.doc, ghdoc/consts.doc,
	  ghdoc/curpar.doc, ghdoc/errcom.doc, ghdoc/event.doc,
	  ghdoc/masind.doc, ghdoc/masses.doc, ghdoc/mat.doc,
	  ghdoc/result.doc, history/geane321, history/geanx321,
	  history/h_v_314.F, history/v_313.F, history/v_314.F,
	  history/v_315.F, history/v_316.F, include_specials/incbeg.inc,
	  include_specials/incend.inc, include_specials/incseq.cra:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:46  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/minicern/: allgs/kerngt.F, allgs/lnblnk.c, allgs/ublow.F,
	  allgs/ubunch.F, gen/def128.inc, gen/def64.inc, gen/defc64.inc,
	  gen/imp128.inc, gen/imp64.inc, gen/impc64.inc, gen/pilot.h,
	  hpxgs/kerngt.F, hpxgs/lnblnk.c, hpxgs/traceq.F, hpxgs/traceqc.c,
	  kerngen/cf_clos.h, kerngen/cf_open.h, kerngen/cf_reaw.h,
	  kerngen/cf_seek.h, kerngen/cf_xaft.h, kerngen/fortchar.h,
	  kerngen/fortranc.h, kerngen/iall1s.inc, kerngen/iallbl.inc,
	  kerngen/kalph.h, kerngen/kdecwnt.h, kerngen/kdos.h,
	  kerngen/khpx.h, kerngen/kirt.h, kerngen/kirtd.h, kerngen/klnx.h,
	  kerngen/kmpw.h, kerngen/kos9.h, kerngen/ksgi.h, kerngen/ksun.h,
	  kerngen/kvaos.h, kerngen/kvax.h, kerngen/kvmi.h, kerngen/kwnt.h,
	  kerngen/pilot.h, kerngen/q_andor.inc, kerngen/q_cbyt.inc,
	  kerngen/q_isabit.inc, kerngen/q_jbit.inc, kerngen/q_jbytet.inc,
	  kerngen/q_sbit.inc, kerngen/q_sbyt.inc, kerngen/q_shift.inc,
	  kerngen/qf_f2c.h, kerngen/qnatch.inc, kerngen/qnatchdata.inc,
	  kerngen/ublowx1.inc, kerngen/ubnchx1.inc, kerngen/wordsizc.h,
	  kerngen/wordsize.inc, kernnum/pilot.h, lnxgs/ibits.F,
	  lnxgs/ishftr.c, lnxgs/kerngt.F, lnxgs/rdmin.F, lnxgs/ublow.F,
	  lnxgs/ubunch.F, lnxgs/utrans.F, lnxppcgs/ublow.F,
	  lnxppcgs/ubunch.F, qutyinv/izbcd.F, qutyinv/izbcdt.F,
	  qutyinv/izbcdv.F, qutyinv/izhnum.F, qutyinv/zhtoi.F,
	  qutyinv/zitoh.F, qutyz32/izbcd.F, qutyz32/izbcdt.F,
	  qutyz32/izbcdv.F, qutyz32/izchav.F, qutyz32/izhnum.F,
	  qutyz32/zhtoi.F, qutyz32/zitoh.F, sungs/datimh.F, sungs/intrac.F,
	  sungs/iumode.F, sungs/jbit.F, sungs/jbyt.F, sungs/jrsbyt.F,
	  sungs/kerngt.F, sungs/qnexte.c, sungs/sbit0.F, sungs/sbit1.F,
	  sungs/sbyt.F, sungs/ublow.F, sungs/ubunch.F, sungs/upkbyt.F,
	  zebra/bankparq.inc, zebra/bkfoparq.inc, zebra/bknmparq.inc,
	  zebra/cqbkc.inc, zebra/debugvf1.inc, zebra/debugvf2.inc,
	  zebra/divparq.inc, zebra/dzc1.inc, zebra/eqlqf.inc,
	  zebra/eqlqform.inc, zebra/eqlqmrf.inc, zebra/eqlqmst.inc,
	  zebra/eqlqr.inc, zebra/eqlqrrf.inc, zebra/eqlqt.inc,
	  zebra/eqlqzep.inc, zebra/fzcf.inc, zebra/fzci.inc,
	  zebra/fzcocc.inc, zebra/fzcseg.inc, zebra/fzcx.inc,
	  zebra/fzstat.inc, zebra/hzc.inc, zebra/jzc.inc,
	  zebra/jztimed.inc, zebra/jztimin.inc, zebra/jztimout.inc,
	  zebra/jzuc.inc, zebra/mqsys.inc, zebra/mqsysh.inc,
	  zebra/mzbits.inc, zebra/mzca.inc, zebra/mzcb.inc, zebra/mzcc.inc,
	  zebra/mzcl.inc, zebra/mzcn.inc, zebra/mzct.inc, zebra/mzcwk.inc,
	  zebra/mzioc.inc, zebra/pilot.h, zebra/pilot.h.ori, zebra/q.inc,
	  zebra/q_and.inc, zebra/q_andor.inc, zebra/q_jbit.inc,
	  zebra/q_jbyt.inc, zebra/q_jbytet.inc, zebra/q_jbytor.inc,
	  zebra/q_locf.inc, zebra/q_mbytet.inc, zebra/q_mbytor.inc,
	  zebra/q_not.inc, zebra/q_or.inc, zebra/q_sbit.inc,
	  zebra/q_sbit0.inc, zebra/q_sbit1.inc, zebra/q_sbyt.inc,
	  zebra/q_shift.inc, zebra/q_shiftl.inc, zebra/q_shiftr.inc,
	  zebra/q_xor.inc, zebra/qcardl.inc, zebra/qequ.inc,
	  zebra/qstore.inc, zebra/qstorjz.inc, zebra/qtoabend.inc,
	  zebra/qtofatal.inc, zebra/qtrace.inc, zebra/qtrace99.inc,
	  zebra/qtraceq.inc, zebra/quest.inc, zebra/questparq.inc,
	  zebra/qversion.inc, zebra/rzbmap.inc, zebra/rzbuff.inc,
	  zebra/rzch.inc, zebra/rzckey.inc, zebra/rzcl.inc,
	  zebra/rzclun.inc, zebra/rzclxx.inc, zebra/rzcount.inc,
	  zebra/rzcout.inc, zebra/rzcstr.inc, zebra/rzcycle.inc,
	  zebra/rzdir.inc, zebra/rzk.inc, zebra/rzover.inc,
	  zebra/storparq.inc, zebra/tzc1.inc, zebra/tzread1.inc,
	  zebra/tzread2.inc, zebra/tzuc.inc, zebra/zbcd.inc,
	  zebra/zbcdch.inc, zebra/zbcdk.inc, zebra/zceta.inc,
	  zebra/zebq.inc, zebra/zfatalch.inc, zebra/zfatalre.inc,
	  zebra/zheadp.inc, zebra/zkrakc.inc, zebra/zkrakcc.inc,
	  zebra/zkrakqu.inc, zebra/zlimit.inc, zebra/zmach.inc,
	  zebra/zmachfix.inc, zebra/znatur.inc, zebra/zstate.inc,
	  zebra/zunit.inc, zebra/zvfaut.inc, zebra/zvfwkc.inc:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:42  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/minicern/: abend.c, atg.F, cfclos.c, cfget.c, cfill.F,
	  cfopei.c, cfopen.F, cfput.c, cfseek.c, cfstat.F, cfstati.c,
	  cleft.F, cltou.F, cross.F, cutol.F, datime.c, datimh.F, dzare1.F,
	  dzbkdv.F, dzbkhd.F, dzbkup.F, dzbkxr.F, dzdata.F, dziopd.F,
	  dzioph.F, dziopr.F, dzmap.F, dzopt.F, dzshpr.F, dzsnap.F,
	  dzswap.F, dztext.F, dztyp.F, f010pr.F, fact.inc, fchput.c,
	  fchtak.c, fint.F, finv.inc, flpsor.F, fzdummies.F, gamma.F,
	  gamma128.F, gamma64.F, gauss.F, gauss128.F, gauss64.F,
	  gausscod.inc, geteni.c, getenvf.F, gshowf.F, hbcdf.F, icluns.F,
	  intrac.F, iucomp.F, iufind.F, iumode.F, iusame.F, izbcd.F,
	  izbcdt.F, izhnum.F, jbit.F, jbyt.F, jrsbyt.F, jumptn.c, jumpxn.c,
	  kerngt.F, kerset.F, lenocc.F, lnblnk.c, locatf.F, locf.c,
	  lorenf.F, mtlprt.F, mtlset.F, mzbook.F, mzchln.F, mzchls.F,
	  mzchnb.F, mzdiv.F, mzdrop.F, mzdvac.F, mzebra.F, mzend.F,
	  mzeunit.inc, mzeunit2.inc, mzfdiv.F, mzfgap.F, mzflag.F,
	  mzform.F, mzgar1.F, mzgarb.F, mzgsta.F, mzinco.F, mzinqd.F,
	  mzinqs.F, mziocf.F, mzioch.F, mziocr.F, mzixco.F, mzlift.F,
	  mzlink.F, mzlint.F, mzlogl.F, mzmaps.F, mzmove.F, mzneed.F,
	  mzpudx.F, mzpush.F, mzrelb.F, mzrell.F, mzrelx.F, mzresv.F,
	  mzsdiv.F, mzstor.F, mztabc.F, mztabf.F, mztabh.F, mztabm.F,
	  mztabr.F, mztabs.F, mztabx.F, mzvers.F, mzwipe.F, mzwork.F,
	  mzxref.F, mzxrup.F, nzleft.F, prob.F, qnext.F, qnexte.c,
	  ranlux.F, ranmar.F, rfact.F, rfinv.F, rinv.F, rnorml.F, rnormx.F,
	  rnpssn.F, sbit0.F, sbit1.F, sbyt.F, sortzv.F, timed.F, timel.F,
	  tmprnt.F, traceq.F, ubits.F, ublow.F, ubunch.F, ucopiv.F,
	  ucopy.F, ucopy2.F, uctoh.F, uctoh1.F, ufill.F, uhtoc.F, uoptc.F,
	  upkbyt.F, uset.F, utrans.F, vblank.F, vfill.F, vmax.F, vmod.F,
	  vscale.F, vunit.F, vxinvb.c, vzero.F, zabend.F, zend.F, zfatal.F,
	  zfatam.F, zhtoi.F, zitoh.F, zpage.F, zphase.F, zpostm.F,
	  zshunt.F, ztell.F, ztelus.F, zvautx.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:33  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/TGeant3/: G3GUI.C, G3GUISliders.cxx, G3GUISliders.h,
	  G3GeometryGUI.cxx, G3GeometryGUI.h, G3GuiGeomDialog.cxx,
	  G3GuiGeomDialog.h, G3GuiGeomMain.cxx, G3GuiGeomMain.h,
	  G3Material.cxx, G3Material.h, G3Medium.cxx, G3Medium.h,
	  G3Node.cxx, G3Node.h, G3Volume.cxx, G3Volume.h, G3toRoot.cxx,
	  G3toRoot.h, TCallf77.h, TG3Application.cxx, TG3Application.h,
	  TGeant3.cxx, TGeant3.h, TGeant3TGeo.cxx, TGeant3TGeo.h,
	  TGeant3f77.cxx, TGeant3f77.h, TGeant3gu.cxx, TGeant3gu.h,
	  THIGZ.cxx, THIGZ.h, TPaveTree.cxx, TPaveTree.h, galicef.F,
	  geant3LinkDef.h, rdummies.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:30  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: miguti/azirn.F, miguti/exprnf.F, miguti/gtiso.F,
	  miguti/randc.F, miguti/sflraf.F, miguti/sigmor.F,
	  neutron/angcdf.F, neutron/bankr.F, neutron/barier.F,
	  neutron/cadig.F, neutron/cangle.F, neutron/cevap.F,
	  neutron/cevap1.F, neutron/chkzeb.F, neutron/clear.F,
	  neutron/cmlabe.F, neutron/cmlabi.F, neutron/colisn.F,
	  neutron/cterp.F, neutron/evaplr.F, neutron/fisrnf.F,
	  neutron/fltrnf.F, neutron/getene.F, neutron/getnu.F,
	  neutron/getpar.F, neutron/grndst.F, neutron/gtmed.F,
	  neutron/interp.F, neutron/intsch.F, neutron/isotpe.F,
	  neutron/labnf.F, neutron/lr2bod.F, neutron/lrnorm.F,
	  neutron/matiso.F, neutron/micset.F, neutron/moxsec.F,
	  neutron/n2nn3n.F, neutron/nghevy.F, neutron/nn2bod.F,
	  neutron/nsigta.F, neutron/partxs.F, neutron/photon.F,
	  neutron/rnmaxf.F, neutron/secegy.F, neutron/secl11.F,
	  neutron/seclf1.F, neutron/seclf5.F, neutron/seclf7.F,
	  neutron/seclf9.F, neutron/stopar.F, neutron/tbsplt.F,
	  neutron/thrmsc.F, neutron/thrsel.F, neutron/trebod.F,
	  neutron/twobod.F, neutron/xsecn1.F, neutron/xsecn2.F,
	  neutron/xsecn3.F, neutron/xsecn5.F, neutron/xsecnu.F,
	  peanut/bimsel.F, peanut/cosleg.F, peanut/fekfnc.F,
	  peanut/fpfrnc.F, peanut/fradnc.F, peanut/frhinc.F,
	  peanut/frhonc.F, peanut/nclvin.F, peanut/nclvst.F,
	  peanut/nucnuc.F, peanut/nwisel.F, peanut/peanut.F,
	  peanut/pfnclv.F, peanut/phdset.F, peanut/phdwll.F,
	  peanut/pioabs.F, peanut/prepre.F, peanut/rstsel.F,
	  peanut/sbcomp.F, peanut/sigfer.F, peanut/umofin.F,
	  peanut/xinneu.F, peanut/xinpro.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:26  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: gxint/gdrmat.F, gxint/gidrop.F, gxint/gintri.F,
	  gxint/goptim.F, gxint/gpaw.F, gxint/gpawpp.F, gxint/gpawpp.F.ori,
	  gxint/gxclos.F, gxint/gxcont.F, gxint/gxcs.F, gxint/gxdraw.F,
	  gxint/gxdz.F, gxint/gxfca.F, gxint/gxfort.F, gxint/gxfz.F,
	  gxint/gxgcon.F, gxint/gxgeom.F, gxint/gxint.F.ori,
	  gxint/gxlist.F, gxint/gxlunf.F, gxint/gxobj.F, gxint/gxphys.F,
	  gxint/gxpick.F, gxint/gxrz.F, gxint/gxscah.F, gxint/gxscal.F,
	  gxint/gxscan.F, gxuser/gukine.F, gxuser/guout.F, gxuser/gustep.F,
	  gxuser/uginit.F, gxuser/uglast.F, matx55/dcross.F, matx55/ddot.F,
	  matx55/dmm55.F, matx55/dnorm.F, matx55/dsmt5t.F, matx55/rmm55.F,
	  matx55/rsmt5t.F, matx55/ssmt5t.F, matx55/xmm55.F,
	  miface/gfmdis.F, miface/gfmfin.F, miface/gmicap.F,
	  miface/gmiset.F, miface/gmorin.F, miface/gmplxs.F,
	  miface/gmxsec.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:21  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: gscan/gscani.F, gscan/gscank.F, gscan/gscano.F,
	  gscan/gscanu.F, gscan/gsscan.F, gstrag/gasho.F, gstrag/gdifmg.F,
	  gstrag/giasho.F, gstrag/gkokri.F, gstrag/goscin.F,
	  gstrag/goscmg.F, gstrag/gpscin.F, gstrag/gstcor.F,
	  gstrag/gstdn.F, gstrag/gstini.F, gstrag/gstint.F,
	  gstrag/gstren.F, gstrag/gsttab.F, gstrag/gstxin.F,
	  gstrag/gxgint.F, gtrak/garndm.F, gtrak/gdebug.F, gtrak/gekbin.F,
	  gtrak/gfinds.F, gtrak/ggckov.F, gtrak/ghelix.F, gtrak/ghelx3.F,
	  gtrak/ginvol.F, gtrak/gltrac.F, gtrak/gnckov.F, gtrak/gpcxyz.F,
	  gtrak/gpgkin.F, gtrak/gpjxyz.F, gtrak/granor.F, gtrak/grkuta.F,
	  gtrak/grndm.F, gtrak/grndmq.F, gtrak/gsking.F, gtrak/gskpho.F,
	  gtrak/gsstak.F, gtrak/gstord.F, gtrak/gstrac.F, gtrak/gsxyz.F,
	  gtrak/gtckov.F, gtrak/gtelec.F, gtrak/gtgama.F, gtrak/gthadr.F,
	  gtrak/gthion.F, gtrak/gtmany.F, gtrak/gtmedi.F, gtrak/gtmuon.F,
	  gtrak/gtneut.F, gtrak/gtnext.F, gtrak/gtnino.F, gtrak/gtrack.F,
	  gtrak/gtrak.doc, gtrak/gtreve.F, gtrak/gtreveroot.F,
	  guser/gudcay.F, guser/gudigi.F, guser/gudtim.F, guser/gufld.F,
	  guser/guhadr.F, guser/guiget.F, guser/guinme.F, guser/guinti.F,
	  guser/gukine.F, guser/gunear.F, guser/guout.F, guser/gupara.F,
	  guser/guphad.F, guser/guplsh.F, guser/guskip.F, guser/gustep.F,
	  guser/guswim.F, guser/gutrak.F, guser/gutrev.F, guser/guview.F,
	  guser/guxcs.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:18  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: gkine/gfkine.F, gkine/gfvert.F, gkine/gkine.doc,
	  gkine/gludky.F, gkine/glund.F, gkine/glundi.F, gkine/gpkine.F,
	  gkine/gpkinx.F, gkine/gpvert.F, gkine/gskine.F, gkine/gskinu.F,
	  gkine/gsvert.F, gkine/gsveru.F, gkine/gtau.F, gparal/checkstr.F,
	  gparal/gpabort.F, gparal/gpdefrng.F, gparal/gpdynamic.F,
	  gparal/gpinit.F, gparal/gplast.F, gparal/gpmsgerr.F,
	  gparal/gpreadrng.F, gparal/gprocs.F, gparal/gprun.F,
	  gparal/gpsumhr.F, gparal/gpsumhr.F.ori, gparal/gptrig.F,
	  gparal/gptrigi.F, gparal/gpwriterng.F, gparal/pbarrier.F,
	  gphys/ganni.F, gphys/ganni2.F, gphys/gannii.F, gphys/gannir.F,
	  gphys/gavrl2.F, gphys/gavrl3.F, gphys/gbflos.F, gphys/gbfsig.F,
	  gphys/gbirk.F, gphys/gbrela.F, gphys/gbrele.F, gphys/gbrelm.F,
	  gphys/gbreme.F, gphys/gbremm.F, gphys/gbrsga.F, gphys/gbrsge.F,
	  gphys/gbrsgm.F, gphys/gbteth.F, gphys/gcbrem.F, gphys/gcoeff.F,
	  gphys/gcomp.F, gphys/gcompi.F, gphys/gdeca2.F, gphys/gdeca3.F,
	  gphys/gdecay.F, gphys/gdray.F, gphys/gdrela.F, gphys/gdrele.F,
	  gphys/gdreli.F, gphys/gdrelm.F, gphys/gdrelp.F, gphys/gdrelx.F,
	  gphys/gdrot.F, gphys/gdrprt.F, gphys/gdrsga.F, gphys/gefch2.F,
	  gphys/gfang.F, gphys/gfluct.F, gphys/gfnrdt.F, gphys/gfrdt.F,
	  gphys/gfsdpr.F, gphys/gfshdc.F, gphys/gfshls.F, gphys/ghsig.F,
	  gphys/ghsigm.F, gphys/glande.F, gphys/glandg.F, gphys/glando.F,
	  gphys/glandr.F, gphys/glands.F, gphys/glandz.F, gphys/glisur.F,
	  gphys/gloren.F, gphys/gmcoul.F, gphys/gmgaus.F, gphys/gmol4.F,
	  gphys/gmoli.F, gphys/gmoli1.F, gphys/gmoli2.F, gphys/gmolie.F,
	  gphys/gmolio.F, gphys/gmols.F, gphys/gmulof.F, gphys/gmults.F,
	  gphys/gpairg.F, gphys/gpairm.F, gphys/gphak.F, gphys/gphal2.F,
	  gphys/gphal3.F, gphys/gphini.F, gphys/gphot.F, gphys/gphoti.F,
	  gphys/gphrin.F, gphys/gphsg1.F, gphys/gphsg2.F, gphys/gphsgp.F,
	  gphys/gphsig.F, gphys/gphxin.F, gphys/gphxsi.F, gphys/gphys.doc,
	  gphys/gphysi.F, gphys/gpoiss.F, gphys/gprela.F, gphys/gprelm.F,
	  gphys/gprobi.F, gphys/gprsga.F, gphys/gprsgg.F, gphys/gprsgm.F,
	  gphys/grangi.F, gphys/grangi1.F, gphys/grayl.F, gphys/grayli.F,
	  gphys/gshlin.F, gphys/gsync.F, gphys/gsynge.F, gphys/gsynit.F,
	  gphys/gvaviv.F, gphys/gvrot.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:14  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: ghrout/cohert.F, ghrout/ghepec.F, ghrout/ghetun.F,
	  ghrout/higclu.F, ghrout/higclu.F.ori, ghrout/highab.F,
	  ghrout/higsel.F, ghrout/higxpt.F, ghrout/sverl2.F,
	  ghrout/svgam7.F, ghutils/minv.F, ghutils/pcsdat.F,
	  giface/compo.F, giface/gheini.F, giface/gheish.F,
	  giface/ghesig.F, giface/ghstop.F, giface/gmunu.F,
	  giface/gmunui.F, giface/gmusig.F, giface/gnslwd.F,
	  giface/gpfis.F, giface/gpfisi.F, giface/gpghei.F,
	  giface/gphmfi.F, giface/limdat.F, giopa/gclose.F, giopa/gfin.F,
	  giopa/gfout.F, giopa/gget.F, giopa/giopa.doc, giopa/gopen.F,
	  giopa/grend.F, giopa/grfile.F, giopa/grget.F, giopa/grin.F,
	  giopa/grleas.F, giopa/grmdir.F, giopa/grout.F, giopa/grout.F.ori,
	  giopa/grsave.F, giopa/gsave.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:11  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: ggeom/gbstat.F, ggeom/gcent.F, ggeom/gdtom.F,
	  ggeom/gfatt.F, ggeom/gfclim.F, ggeom/gfcoor.F, ggeom/gfcord.F,
	  ggeom/gfcvol.F, ggeom/gfipar.F, ggeom/gflcar.F, ggeom/gflphi.F,
	  ggeom/gflrad.F, ggeom/gflthe.F, ggeom/gfmoth.F, ggeom/gfpara.F,
	  ggeom/gfstat.F, ggeom/gfupar.F, ggeom/gfvolu.F, ggeom/ggcave.F,
	  ggeom/ggdpar.F, ggeom/ggdspe.F, ggeom/ggdvlp.F, ggeom/ggeom.doc,
	  ggeom/ggnlev.F, ggeom/ggord.F, ggeom/ggordq.F, ggeom/ggperp.F,
	  ggeom/ggperp.F.ori, ggeom/ggppar.F, ggeom/ggppar.F.ori,
	  ggeom/ggvchk.F, ggeom/ginctu.F, ggeom/gingtr.F, ggeom/ginme.F,
	  ggeom/ginpar.F, ggeom/ginpco.F, ggeom/ginpgo.F, ggeom/ginrot.F,
	  ggeom/gintco.F, ggeom/gintrp.F, ggeom/gitran.F, ggeom/glmoth.F,
	  ggeom/glvolu.F, ggeom/gmedi2.F, ggeom/gmedia.F,
	  ggeom/gmedia.F.ori, ggeom/gmedin.F, ggeom/gmediv.F,
	  ggeom/gmepos.F, ggeom/gmtod.F, ggeom/gnbox.F, ggeom/gncone.F,
	  ggeom/gnctub.F, ggeom/gneltu.F, ggeom/gnex2.F, ggeom/gnext.F,
	  ggeom/gnhype.F, ggeom/gnobox.F, ggeom/gnocon.F, ggeom/gnoctu.F,
	  ggeom/gnoelt.F, ggeom/gnohyp.F, ggeom/gnopar.F, ggeom/gnopco.F,
	  ggeom/gnopg1.F, ggeom/gnopgo.F, ggeom/gnosph.F, ggeom/gnotr1.F,
	  ggeom/gnotr2.F, ggeom/gnotr9.F, ggeom/gnotra.F, ggeom/gnotrp.F,
	  ggeom/gnotub.F, ggeom/gnpara.F, ggeom/gnpcon.F, ggeom/gnpgo1.F,
	  ggeom/gnpgon.F, ggeom/gnsphr.F, ggeom/gntrap.F, ggeom/gntrp.F,
	  ggeom/gntube.F, ggeom/gprotm.F, ggeom/gprotx.F, ggeom/gpstat.F,
	  ggeom/gpvolu.F, ggeom/gpvolx.F, ggeom/grmtd.F, ggeom/grmul.F,
	  ggeom/grot.F, ggeom/grpar.F, ggeom/gsagtr.F, ggeom/gsaphi.F,
	  ggeom/gsatt.F, ggeom/gschk.F, ggeom/gscvol.F, ggeom/gsdvn.F,
	  ggeom/gsdvn2.F, ggeom/gsdvs.F, ggeom/gsdvs2.F, ggeom/gsdvt.F,
	  ggeom/gsdvt2.F, ggeom/gsdvx.F, ggeom/gsipar.F, ggeom/gsnear.F,
	  ggeom/gsnext.F, ggeom/gsngtr.F, ggeom/gsord.F, ggeom/gspos.F,
	  ggeom/gsposp.F, ggeom/gsrotm.F, ggeom/gsunea.F, ggeom/gsvolu.F,
	  ggeom/gtrain.F, ggeom/gtrmul.F, ggeom/gtrnsf.F, ggeom/gvdcar.F,
	  ggeom/gvdlim.F, ggeom/gvdphi.F, ggeom/gvdrad.F, ggeom/gvdthe.F,
	  ggeom/gvgrad.F, ggeom/gvlong.F, ggeom/gvpsqr.F, ggeom/gvsafe.F,
	  ggeom/gvsign.F, ggeom/sxsrot.F, gheisha/add.F, gheisha/add3.F,
	  gheisha/ang.F, gheisha/atomas.F, gheisha/captur.F,
	  gheisha/casal0.F, gheisha/casaom.F, gheisha/casasm.F,
	  gheisha/casasp.F, gheisha/casax0.F, gheisha/casaxm.F,
	  gheisha/casfrg.F, gheisha/cask0.F, gheisha/cask0b.F,
	  gheisha/caskm.F, gheisha/caskp.F, gheisha/casl0.F,
	  gheisha/casn.F, gheisha/casnb.F, gheisha/casom.F, gheisha/casp.F,
	  gheisha/caspb.F, gheisha/caspim.F, gheisha/caspip.F,
	  gheisha/cassm.F, gheisha/cassp.F, gheisha/casx0.F,
	  gheisha/casxm.F, gheisha/cinema.F, gheisha/coranh.F,
	  gheisha/coscat.F, gheisha/cross3.F, gheisha/defs.F,
	  gheisha/defs1.F, gheisha/dlpnuc.F, gheisha/dlpsor.F,
	  gheisha/dotes2.F, gheisha/dotnuc.F, gheisha/dpdnuc.F,
	  gheisha/exnu.F, gheisha/fctcos.F, gheisha/fermi.F,
	  gheisha/fissio.F, gheisha/gdpdk.F, gheisha/genxpt.F,
	  gheisha/gpdk.F, gheisha/kmabs.F, gheisha/length.F, gheisha/lor.F,
	  gheisha/nbanh.F, gheisha/nfac.F, gheisha/normal.F,
	  gheisha/nucrec.F, gheisha/pbanh.F, gheisha/phasp.F,
	  gheisha/phpnuc.F, gheisha/pimabs.F, gheisha/pmltpc.F,
	  gheisha/poisso.F, gheisha/ranres.F, gheisha/rotes2.F,
	  gheisha/rtmi.F, gheisha/selfab.F, gheisha/setcur.F,
	  gheisha/settrk.F, gheisha/steep.F, gheisha/steeq.F,
	  gheisha/steer.F, gheisha/stees.F, gheisha/stpair.F,
	  gheisha/sub.F, gheisha/sub3.F, gheisha/tdelay.F, gheisha/trac.F,
	  gheisha/twob.F, gheisha/twoclu.F, ghits/gcderr.F, ghits/gcdrif.F,
	  ghits/gcmwpc.F, ghits/gcubs.F, ghits/gfdet.F, ghits/gfdeta.F,
	  ghits/gfdetd.F, ghits/gfdeth.F, ghits/gfdetu.F, ghits/gfdigi.F,
	  ghits/gfhits.F, ghits/gfndig.F, ghits/gfnhit.F, ghits/gfpath.F,
	  ghits/ggdetv.F, ghits/ghits.doc, ghits/gicyl.F, ghits/giplan.F,
	  ghits/gpdigi.F, ghits/gpdrif.F, ghits/gphits.F, ghits/gpmwpc.F,
	  ghits/gpsets.F, ghits/grhits.F, ghits/gsahit.F, ghits/gschit.F,
	  ghits/gsdet.F, ghits/gsdeta.F, ghits/gsdetd.F, ghits/gsdeth.F,
	  ghits/gsdetu.F, ghits/gsdetv.F, ghits/gsdigi.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:07  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: gdraw/gchnwk.F, gdraw/gd16v.F, gdraw/gd3d3d.F,
	  gdraw/gdahit.F, gdraw/gdarc.F, gdraw/gdarr.F, gdraw/gdaxis.F,
	  gdraw/gdbomb.F, gdraw/gdcgcl.F, gdraw/gdcgem.F, gdraw/gdcger.F,
	  gdraw/gdcghi.F, gdraw/gdcgob.F, gdraw/gdcgpr.F, gdraw/gdcgrs.F,
	  gdraw/gdcgsl.F, gdraw/gdcgvw.F, gdraw/gdcgwv.F, gdraw/gdchit.F,
	  gdraw/gdcirc.F, gdraw/gdcirr.F, gdraw/gdciry.F, gdraw/gdclos.F,
	  gdraw/gdcol.F, gdraw/gdcol1.F, gdraw/gdcota.F, gdraw/gdcurs.F,
	  gdraw/gdcut.F, gdraw/gdcxyz.F, gdraw/gdelet.F, gdraw/gdeltu.F,
	  gdraw/gdfr3d.F, gdraw/gdfspc.F, gdraw/gdhead.F, gdraw/gdhits.F,
	  gdraw/gdinit.F, gdraw/gdkine.F, gdraw/gdlcyl.F, gdraw/gdlens.F,
	  gdraw/gdline.F, gdraw/gdlumi.F, gdraw/gdlw.F, gdraw/gdlw1.F,
	  gdraw/gdman.F, gdraw/gdnino.F, gdraw/gdnson.F, gdraw/gdopen.F,
	  gdraw/gdopt.F, gdraw/gdpart.F, gdraw/gdplst.F, gdraw/gdprtr.F,
	  gdraw/gdrack.F, gdraw/gdraw.F, gdraw/gdraw.doc, gdraw/gdrawc.F,
	  gdraw/gdrawp.F, gdraw/gdraws.F, gdraw/gdrawt.F, gdraw/gdrawv.F,
	  gdraw/gdrawx.F, gdraw/gdrayt.F, gdraw/gdrect.F, gdraw/gdrvol.F,
	  gdraw/gdrwsc.F, gdraw/gdsarc.F, gdraw/gdscal.F, gdraw/gdshad.F,
	  gdraw/gdshif.F, gdraw/gdshow.F, gdraw/gdson.F, gdraw/gdspec.F,
	  gdraw/gdssur.F, gdraw/gdstep.F, gdraw/gdsurf.F, gdraw/gdthrz.F,
	  gdraw/gdtr0.F, gdraw/gdtr1.F, gdraw/gdtr10.F, gdraw/gdtr11.F,
	  gdraw/gdtr12.F, gdraw/gdtr2.F, gdraw/gdtr3.F, gdraw/gdtr4.F,
	  gdraw/gdtr5.F, gdraw/gdtr6.F, gdraw/gdtr8.F, gdraw/gdtr99.F,
	  gdraw/gdtrak.F, gdraw/gdtree.F, gdraw/gdwmn1.F, gdraw/gdwmn2.F,
	  gdraw/gdwmn3.F, gdraw/gdxyz.F, gdraw/gdxzoo.F, gdraw/gdzoom.F,
	  gdraw/geditv.F, gdraw/gfind.F, gdraw/gkhits.F, gdraw/gkxyz.F,
	  gdraw/glight.F, gdraw/gm3pol.F, gdraw/gmclos.F, gdraw/gmopen.F,
	  gdraw/greswk.F, gdraw/gspe3d.F, gdraw/gunliv.F, gdraw/gviewf.F,
	  geant321/aadat.inc, geant321/auxpar.inc, geant321/balanc.inc,
	  geant321/bamjcm.inc, geant321/blank.inc, geant321/camass.inc,
	  geant321/cerrcm.inc, geant321/cgcaan.inc, geant321/cgcedg.inc,
	  geant321/cgcfac.inc, geant321/cgctra.inc, geant321/cgdelt.inc,
	  geant321/cggpar.inc, geant321/cghpar.inc, geant321/cgxcom.inc,
	  geant321/cmagic.inc, geant321/cmass.inc, geant321/cmsres.inc,
	  geant321/comcon.inc, geant321/comcont.inc, geant321/corinc.inc,
	  geant321/crandm.inc, geant321/dblprc.inc, geant321/decayc.inc,
	  geant321/decayc2.inc, geant321/depnuc.inc, geant321/dimpar.inc,
	  geant321/eropts.inc, geant321/ertrio.inc, geant321/erwork.inc,
	  geant321/eva0.inc, geant321/eva1.inc, geant321/fheavy.inc,
	  geant321/fheavyt.inc, geant321/finlsp.inc, geant321/finlsp2.inc,
	  geant321/finlsp3.inc, geant321/finpar.inc, geant321/finpar2.inc,
	  geant321/finuc.inc, geant321/finuc2.inc, geant321/finuct.inc,
	  geant321/forcn.inc, geant321/gc10ev.inc, geant321/gcasho.inc,
	  geant321/gcbank.inc, geant321/gccurs.inc, geant321/gccuts.inc,
	  geant321/gcdlin.inc, geant321/gcdraw.inc, geant321/gcfdim.inc,
	  geant321/gcflag.inc, geant321/gcgobj.inc, geant321/gchil2.inc,
	  geant321/gchiln.inc, geant321/gchvir.inc, geant321/gcjloc.inc,
	  geant321/gcjump.inc, geant321/gckine.inc, geant321/gcking.inc,
	  geant321/gckmax.inc, geant321/gclink.inc, geant321/gclist.inc,
	  geant321/gclund.inc, geant321/gcmate.inc, geant321/gcmulo.inc,
	  geant321/gcmutr.inc, geant321/gcmzfo.inc, geant321/gcnmec.inc,
	  geant321/gcnum.inc, geant321/gcomis.inc, geant321/gconsp.inc,
	  geant321/gconst.inc, geant321/gcopti.inc, geant321/gcpara.inc,
	  geant321/gcparm.inc, geant321/gcphnr.inc, geant321/gcphpr.inc,
	  geant321/gcphrd.inc, geant321/gcphxs.inc, geant321/gcphys.inc,
	  geant321/gcpixe.inc, geant321/gcpmxz.inc, geant321/gcpoly.inc,
	  geant321/gcpotm.inc, geant321/gcpush.inc, geant321/gcrayt.inc,
	  geant321/gcrz.inc, geant321/gcscal.inc, geant321/gcscan.inc,
	  geant321/gcsetf.inc, geant321/gcsets.inc, geant321/gcshno.inc,
	  geant321/gcshpt.inc, geant321/gcspee.inc, geant321/gcstak.inc,
	  geant321/gcstra.inc, geant321/gctime.inc, geant321/gctmed.inc,
	  geant321/gctrak.inc, geant321/gcunit.inc, geant321/gcursb.inc,
	  geant321/gcvdma.inc, geant321/gcvol1.inc, geant321/gcvol2.inc,
	  geant321/gcvolu.inc, geant321/gcxlun.inc, geant321/gfkdis.inc,
	  geant321/gsecti.inc, geant321/gtasho.inc, geant321/gtbank.inc,
	  geant321/gtcons.inc, geant321/gtcurs.inc, geant321/gtcuts.inc,
	  geant321/gtdraw.inc, geant321/gtfdim.inc, geant321/gtflag.inc,
	  geant321/gthil2.inc, geant321/gthiln.inc, geant321/gthvir.inc,
	  geant321/gtjump.inc, geant321/gtkine.inc, geant321/gtlink.inc,
	  geant321/gtlist.inc, geant321/gtmutr.inc, geant321/gtnum.inc,
	  geant321/gtopti.inc, geant321/gtpara.inc, geant321/gtparm.inc,
	  geant321/gtphys.inc, geant321/gtpixe.inc, geant321/gtrayt.inc,
	  geant321/gtscal.inc, geant321/gtscan.inc, geant321/gtsets.inc,
	  geant321/gtspee.inc, geant321/gtstak.inc, geant321/gttmed.inc,
	  geant321/gttrak.inc, geant321/gtursb.inc, geant321/gtvdma.inc,
	  geant321/gtvol1.inc, geant321/gtvolu.inc, geant321/gversc.inc,
	  geant321/hadflg.inc, geant321/hadpar.inc, geant321/hetc5.inc,
	  geant321/hetc7.inc, geant321/hettp.inc, geant321/higfis.inc,
	  geant321/incdek.inc, geant321/inpdat.inc, geant321/inpdat2.inc,
	  geant321/inpflg.inc, geant321/iounit.inc, geant321/isotop.inc,
	  geant321/labcos.inc, geant321/limits.inc, geant321/ludat1.inc,
	  geant321/ludat3.inc, geant321/lujets.inc, geant321/mapa.inc,
	  geant321/mapat.inc, geant321/mapoll.inc, geant321/mconst.inc,
	  geant321/mcreco.inc, geant321/mcross.inc, geant321/metlsp.inc,
	  geant321/mgamma.inc, geant321/minput.inc, geant321/mmass.inc,
	  geant321/mmicab.inc, geant321/mmicap.inc, geant321/mnutrn.inc,
	  geant321/mparam.inc, geant321/mpifinc.inc, geant321/mpoint.inc,
	  geant321/mpstor.inc, geant321/mrecoi.inc, geant321/multiprox.inc,
	  geant321/multseeds.inc, geant321/mupsca.inc, geant321/mxgkgh.inc,
	  geant321/nucdat.inc, geant321/nucgeo.inc, geant321/nuciod.inc,
	  geant321/nuclev.inc, geant321/nucpar.inc, geant321/nucstf.inc,
	  geant321/paprop.inc, geant321/papropt.inc, geant321/parevt.inc,
	  geant321/parnuc.inc, geant321/part.inc, geant321/part2.inc,
	  geant321/part2t.inc, geant321/part3.inc, geant321/partt.inc,
	  geant321/pawc.inc, geant321/pawct.inc, geant321/pcodat.inc,
	  geant321/pcodim.inc, geant321/pilot.h, geant321/pilot.h.ori,
	  geant321/qquark.inc, geant321/reac.inc, geant321/redver.inc,
	  geant321/resnuc.inc, geant321/s_blank.inc, geant321/s_blankp.inc,
	  geant321/s_consts.inc, geant321/s_coscom.inc,
	  geant321/s_csdat.inc, geant321/s_csdim.inc,
	  geant321/s_curpar.inc, geant321/s_defcom.inc,
	  geant321/s_errcom.inc, geant321/s_event.inc,
	  geant321/s_genio.inc, geant321/s_kginit.inc, geant321/s_mat.inc,
	  geant321/s_nucio.inc, geant321/s_prntfl.inc,
	  geant321/s_result.inc, geant321/sckine.inc, geant321/split.inc,
	  geant321/trcom3.inc, geant321/xsepar.inc, geocad/gboset.F,
	  geocad/gckmat.F, geocad/gckpar.F, geocad/gcoset.F,
	  geocad/gcsetc.F, geocad/gctset.F, geocad/gdexca.F,
	  geocad/gelset.F, geocad/genset.F, geocad/getshp.F,
	  geocad/gjwrit.F, geocad/gpaset.F, geocad/gpcset.F,
	  geocad/gpgset.F, geocad/gposi.F, geocad/gptset.F,
	  geocad/greucl.F, geocad/gspset.F, geocad/gstmat.F,
	  geocad/gstset.F, geocad/gtrase.F, geocad/gtrdse.F,
	  geocad/gtrset.F, geocad/gtuset.F, geocad/gtxset.F,
	  geocad/gweucl.F, geocad/gwrtre.F, geocad/history.F,
	  geocad/readme.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:03  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: fiface/fldist.F, fiface/flinit.F, fiface/flufin.F,
	  fiface/flufin.F.ori, fluka/abbrch.F, fluka/ainel.F,
	  fluka/akeka.F, fluka/altra.F, fluka/altraf.F, fluka/amga.F,
	  fluka/ankeka.F, fluka/bamjev.F, fluka/beexi.F, fluka/bekeka.F,
	  fluka/berttp.F, fluka/beta.F, fluka/betarn.F, fluka/betrst.F,
	  fluka/bkeka.F, fluka/bklass.F, fluka/bnkeka.F, fluka/calumo.F,
	  fluka/calumv.F, fluka/chanwt.F, fluka/corevt.F, fluka/corrin.F,
	  fluka/datar3.F, fluka/decaux.F, fluka/decay.F, fluka/difevv.F,
	  fluka/dost.F, fluka/drelab.F, fluka/dres.F, fluka/eexi.F,
	  fluka/eexlvl.F, fluka/ekeka.F, fluka/energi.F, fluka/energy.F,
	  fluka/enrg.F, fluka/erup.F, fluka/evdeex.F, fluka/eventv.F,
	  fluka/evevap.F, fluka/evvini.F, fluka/ferevv.F, fluka/ferhav.F,
	  fluka/fisfra.F, fluka/fkdeca.F, fluka/fkdres.F, fluka/fkener.F,
	  fluka/fkerup.F, fluka/fkflav.F, fluka/fkimpu.F, fluka/fksigi.F,
	  fluka/fkvert.F, fluka/fkzero.F, fluka/flavor.F, fluka/fpower.F,
	  fluka/fprob.F, fluka/gamrn.F, fluka/geta.F, fluka/hadden.F,
	  fluka/hadevv.F, fluka/hadrin.F, fluka/hadriv.F, fluka/hevhin.F,
	  fluka/hinhev.F, fluka/hklass.F, fluka/hypero.F, fluka/iefun.F,
	  fluka/impuls.F, fluka/incini.F, fluka/index2.F, fluka/kinpar.F,
	  fluka/kpois.F, fluka/lortra.F, fluka/nizl.F, fluka/nizlnw.F,
	  fluka/nucevv.F, fluka/nucrel.F, fluka/nucriv.F, fluka/nudisv.F,
	  fluka/nuprel.F, fluka/parjet.F, fluka/pmprab.F, fluka/poli.F,
	  fluka/qnrg.F, fluka/raco.F, fluka/rakekv.F, fluka/rbkekv.F,
	  fluka/rchanv.F, fluka/rotat.F, fluka/samcst.F, fluka/sfecfe.F,
	  fluka/shptot.F, fluka/sigel.F, fluka/sigint.F, fluka/sihael.F,
	  fluka/sitsao.F, fluka/stalin.F, fluka/tchoic.F, fluka/threpd.F,
	  fluka/trafo.F, fluka/trahad.F, fluka/trans.F, fluka/ttrans.F,
	  fluka/twopad.F, fluka/twopar.F, fluka/verein.F, fluka/vertex.F,
	  fluka/xlamb.F, fluka/xseneu.F, fluka/xsepro.F, fluka/zeroin.F,
	  gbase/gbase.doc, gbase/gbhsta.F, gbase/geamon.F, gbase/getnum.F,
	  gbase/getver.F, gbase/gffgo.F, gbase/gfhead.F, gbase/gfhsta.F,
	  gbase/gfrung.F, gbase/ggclo2.F, gbase/ggclos.F, gbase/ghclos.F,
	  gbase/ginit.F, gbase/glast.F, gbase/glook.F, gbase/gmail.F,
	  gbase/gphead.F, gbase/gprint.F, gbase/gprung.F, gbase/grun.F,
	  gbase/gshead.F, gbase/gsrung.F, gbase/gtrig.F, gbase/gtrigc.F,
	  gbase/gtrigi.F, gbase/gwork.F, gbase/gzebra.F, gbase/gzinit.F,
	  gcons/gcons.doc, gcons/gevkev.F, gcons/gfcoul.F, gcons/gfmate.F,
	  gcons/gfpart.F, gcons/gftmat.F, gcons/gftmed.F, gcons/ghmix.F,
	  gcons/gmate.F, gcons/gpart.F, gcons/gpions.F, gcons/gplmat.F,
	  gcons/gpmate.F, gcons/gpmatx.F, gcons/gppart.F, gcons/gpparx.F,
	  gcons/gprmat.F, gcons/gptmed.F, gcons/gptmex.F, gcons/gsckov.F,
	  gcons/gsdk.F, gcons/gsmate.F, gcons/gsmate.F.ori, gcons/gsmixt.F,
	  gcons/gspart.F, gcons/gstmed.F, gcons/gstpar.F, gcons/gxsi.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 01:00  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: erdecks/erbcer.F, erdecks/erbctr.F, erdecks/erland.F,
	  erdecks/ermcsc.F, erdecks/erpini.F, erdecks/erprop.F,
	  erdecks/erstor.F, erdecks/ertrak.F, erdecks/ertrch.F,
	  erdecks/ertrgo.F, erdecks/ertrnt.F, erdecks/erxyzc.F,
	  erdecks/eufill.F, erdecks/eufilp.F, erdecks/eufilv.F,
	  erdecks/eustep.F, erdecks/evolio.F, erpremc/trprfn.F,
	  erpremc/trprop.F, erpremc/trptsc.F, erpremc/trptsd.F,
	  erpremc/trs1s2.F, erpremc/trscpt.F, erpremc/trscsd.F,
	  erpremc/trscsp.F, erpremc/trsdpt.F, erpremc/trsdsc.F,
	  erpremc/trspsc.F, examples/E01.C, examples/E01_g3Config.C,
	  examples/E02.C, examples/E02_g3Config.C, examples/E03.C,
	  examples/E03_g3Config.C, examples/Makefile, examples/flukaaf.dat,
	  examples/flukaerr.dat, examples/galicef.F, examples/gcbank.inc,
	  examples/gccuts.inc, examples/gcflag.inc, examples/gckine.inc,
	  examples/gcking.inc, examples/gclist.inc, examples/gcmate.inc,
	  examples/gcnum.inc, examples/gconsp.inc, examples/gconst.inc,
	  examples/gcphys.inc, examples/gcscan.inc, examples/gctmed.inc,
	  examples/gctrak.inc, examples/gcunit.inc, examples/gcvolu.inc,
	  examples/gexam1.F, examples/gexam1.dat, examples/gexam3.F,
	  examples/gexam3.dat, examples/gexam4.F, examples/gexam4.dat,
	  examples/gmain.cxx, examples/gphysi.dat, examples/model.F,
	  examples/model.dat, examples/model.inc, examples/rootlogon.C:

	First commit. geant321+_vmc Version 1.3

2006-02-14 00:56  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: comad/gcadd.cxx, comad/gcomad.F, config/MakeExe,
	  config/MakeMacros, config/MakeRules, config/Makedepend,
	  config/Makefile.alphacxx6, config/Makefile.hpuxacc,
	  config/Makefile.linux, config/Makefile.linuxia64ecc,
	  config/Makefile.linuxia64gcc, config/Makefile.linuxicc,
	  config/Makefile.linuxx8664gcc, config/Makefile.macosx,
	  config/Makefile.macosxxlc, config/Makefile.solarisCC5,
	  config/makedist.sh, config/version_number, data/flukaaf.dat,
	  data/xsneut95.dat:

	First commit. geant321+_vmc Version 1.3

2006-02-14 00:53  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: block/fdevap.F, block/fdnopt.F, block/fdpree.F,
	  block/flkdt1.F, block/flkdt2.F, block/flkdt3.F, block/flkdt4.F,
	  block/flkdt5.F, block/flkdt6.F, block/flkdt7.F, cdf/g321m.c,
	  cdf/g321m.cdf, cdf/g321x.c, cdf/g321x.cdf, cgpack/cgaffi.F,
	  cgpack/cgbfit.F, cgpack/cgbint.F, cgpack/cgbmmt.F,
	  cgpack/cgbool.F, cgpack/cgbox.F, cgpack/cgbrik.F,
	  cgpack/cgbsea.F, cgpack/cgbsec.F, cgpack/cgbsor.F,
	  cgpack/cgbsub.F, cgpack/cgbtef.F, cgpack/cgbtfp.F,
	  cgpack/cgbttt.F, cgpack/cgcev.F, cgpack/cgcopy.F,
	  cgpack/cgelli.F, cgpack/cgfac2.F, cgpack/cgfaco.F,
	  cgpack/cgfare.F, cgpack/cgfvis.F, cgpack/cghcre.F,
	  cgpack/cghdfa.F, cgpack/cghend.F, cgpack/cgheva.F,
	  cgpack/cghins.F, cgpack/cghmov.F, cgpack/cghpla.F,
	  cgpack/cghpla.F.ori, cgpack/cghren.F, cgpack/cghshi.F,
	  cgpack/cghsiz.F, cgpack/cghtre.F, cgpack/cginve.F,
	  cgpack/cgmnmx.F, cgpack/cgpers.F, cgpack/cgrifl.F,
	  cgpack/cgsaan.F, cgpack/cgscop.F, cgpack/cgshel.F,
	  cgpack/cgshif.F, cgpack/cgsize.F, cgpack/cgslic.F,
	  cgpack/cgsnor.F, cgpack/cgsphe.F, cgpack/cgsub.F,
	  cgpack/cgtset.F, cgpack/cgtstr.F, cgpack/cgvedg.F,
	  cgpack/cgvhed.F, cgpack/cgvtef.F, cgpack/cgvtin.F,
	  cgpack/cgwire.F, cgpack/cgwsor.F, cgpack/cgzre.F,
	  cgpack/cgzrev.F:

	First commit. geant321+_vmc Version 1.3

2006-02-14 00:50  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/added/: dummies.c, dummies2.c, loadmod.F:

	First commit.  geant321+_vmc Version 1.3

2006-02-13 23:32  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	include the check on target position to be in the IsGoodSpill method so
	that if the event is MC, the target position is not checked after all -
	it aint filled, why check it.

2006-02-13 23:18  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/: GNUmakefile, Makefile, README, gcinit.F:

	New package to house MINOS customized Geant3 concrete vmc implementation

2006-02-13 22:53  arms

	* MCMonitor/macro/outputMCMonitorPlots.C:

	Add the ability to write comparison failures to a separate ps file on output (outputMCMonitorPlots.C). Meant to put this in before the initial commit, but oh well...

2006-02-13 22:28  arms

	* MCMonitor/: GNUmakefile, LinkDef.h, MCMonitor.cxx, MCMonitor.h,
	  MCMonitorHistograms.cxx, MCMonitorHistograms.h,
	  mcmon_hist_list.txt, macro/MCMonitorStyle.C,
	  macro/makeMCMonitorPlots.C, macro/outputMCMonitorPlots.C:

	MCMonitor : Produce and compare characteristic truth and truth vs.
	            reconstruction Monte Carlo quantities for validation and
	            monitoring.

	- Compares *ANY* two input Monte Carlo samples, so one can investigate
	  the effect of any differences leading to ntuple output (i.e.
	  particle transport, reconstruction, beam flux, etc.)
	- Main forseen uses:
	  (1) MC generator validation (i.e. ParticleTransportSim)
	  (2) Farm MC production monitoring
	  (3) Minossoft release validation
	- Reads from input NtpSt (or NtpSR, NtpMC, NtpTH) produced by
	  standard reconstruction
	- The most important part of the package is the macros:
	  makeMCMonitorPlots.C    -- generate a root file w/standard plots
	  outputMCMonitorPlots.C  -- produce output comparison plots
	  MCMonitorStyle.C        -- TStyle for MCMonitor
	- See MINOS docDB documents 1390 and 1507
	  https://minos-docdb.fnal.gov:440/cgi-bin/ShowDocument?docid=1390
	  and:
	  https://minos-docdb.fnal.gov:440/cgi-bin/ShowDocument?docid=1507

2006-02-13 22:28  Sue Kasahara <schubert@hep.umn.edu>

	* CVSROOT/: check_access, modules:

	[no log message]

2006-02-13 22:23  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/.cvsignore:

	New package to house Geant3 concrete vmc implementation (TGeant3), customized
	for MINOS purposes.

2006-02-13 22:23  Sue Kasahara <schubert@hep.umn.edu>

	* G3PTSim/.cvsignore:

	Initial revision

2006-02-13 22:08  Sue Kasahara <schubert@hep.umn.edu>

	* CVSROOT/framework.list:

	Add Masaki to cvs update e-mail list.

2006-02-13 21:13  arms

	* RootUtil/TPSTest/: TPSTest.cxx, TPSTest.h:

	Fix some documentation.

2006-02-13 19:39  Brett Viren <bv@bnl.gov>

	* BeamDataUtil/test/: BDTestData.cxx, run_bdtd.C:

	Updated scale for latest integrated (pushing 1.4e20)

2006-02-13 19:03  Liz Buckley-Geer <buckley@fnal.gov>

	* WebDocs/cvs-rep.html:

	Second attempt to fix broken link

2006-02-13 19:00  Liz Buckley-Geer <buckley@fnal.gov>

	* WebDocs/cvs-rep.html:

	Fix broken link

2006-02-13 18:40  Minos CVS group account.  Do not commit from here!

	* RootUtil/TPSTest/: TPSTest.cxx, TPSTest.h:

	Add method GetInt() that returns the integral of bin contents within the specified range.

2006-02-13 17:14  Ed Larty <lartey@hepr0.physics.tamu.edu>

	* setup/packages-R1.18.3:

	#new frozen tag for R1.18

2006-02-13 17:09  Robert Hatcher <rhatcher@fnal.gov>

	* AnalysisNtuples/Module/: ANtpInfoObjectFillerBeam.cxx,
	  ANtpInfoObjectFillerBeam.h:

	Convert from DetectorType:: to Detector:: (last case in this package).

2006-02-13 13:29  asousa

	* Monitoring/: SinglAnalysis.cxx, SinglAnalysis.h:

	Clone the new checklist plots into the Monitoring Blocks TRC plots. A few
	cosmetic changes.

2006-02-13 10:25  asousa

	* CVSROOT/check_access:

	Adding Jeff H. to DataUtil so he can commit his LI Filter.

2006-02-13 06:30  avva

	* CandFitTrackSA/: README, reco.C:

	Updated sample job script.

2006-02-13 05:06  avva

	* CandFitTrackSA/: AlgFitTrackSA.h, AlgFitTrackSAList.cxx,
	  ConstFT.h, ConvergenceMaster.cxx, ConvergenceMaster.h,
	  MatrixCalculator.cxx, TrackContext.cxx,
	  TrackSegmentMakerDummy.cxx:

	Added some comments, fixed compiler warnings.

2006-02-13 03:50  avva

	* CandFitTrackSA/: DBtxt_AlgFitTrackSA_default.C, FitResult.cxx,
	  FitResult.h, FitStateConverged.cxx, FitTrackSAListModule.cxx,
	  FitTrackSAListModule.h, MatrixCalculator.cxx, MatrixCalculator.h,
	  TrackFilterBFCalibFD.cxx, TrackFilterBFCalibFD.h,
	  TrackFilterBFCalibND.cxx, TrackFilterBFCalibND.h:

	Fixed calculation of the ndf written into NtpFitSA the ntuple. Added TrackFilterBFCalibFD class to select stopping track candidates in the Far det.

2006-02-13 00:35  niki

	* Mad/data/: weights_nearle18_2.dat, weights_nearphe18_2.dat,
	  weights_nearpme18_2.dat:

	 18_2 ANN weight files for near

2006-02-13 00:34  niki

	* Mad/MadNsID.cxx:

	update my ANN weight files to version 18_2

2006-02-13 00:32  niki

	* Mad/MadDpAnalysis.cxx:

	Fixed shower selection there as well

2006-02-13 00:32  niki

	* Mad/MadBase.h:

	.h file

2006-02-13 00:32  niki

	* Mad/MadBase.cxx:

	Added MadBase::LoadShower_Jim(Int_t ievt,Int_t &ishw, Int_t detector) that calculated primary shower of events according
	to the prescription shown in Reconstruction meeting of 02-09-06

2006-02-13 00:20  kordosky

	* DataUtil/: EnergyCorrections.cxx, EnergyCorrections.h:

	correction of +1.8% to FD data shower energy

2006-02-12 22:09  kordosky

	* DataUtil/: EnergyCorrections.cxx, EnergyCorrections.h:

	Update momentum correction to account for new density and thickness measurements.

2006-02-12 20:37  boehm

	* CandChop/: DBtxt_AlgChopListSharp2_NearBeam.C,
	  DBtxt_AlgChopListSharp2_default.C, SliceFromChopModule.cxx,
	  SliceFromChopModule.h:

	Backporting changes to the CandChopper for compatibility with the Near Detector. Also adding an empty DBtxt file so there is no error message when AlgChopListSharp2_default points to a configuration that doesn't exist (NearBeam).

2006-02-12 18:33  hartnell

	* MeuCal/MeuAnalysis.cxx:

	Fix a bug spotted by Phill L. The pulser box boundaries were not quite
	right when running on Cam ntuples... I changed one but not the other
	before.

2006-02-12 15:38  cbs

	* MCReweight/macros/muonInfo.C:

	Updates

2006-02-12 05:20  asousa

	* Monitoring/: ErrorBlockAnalysis.cxx, ErrorBlockAnalysis.h,
	  Producer_dispatcher.cc, SinglAnalysis.cxx, SinglAnalysis.h:

	Filled the TRC monitoring block histograms and created a new PPS time monitoring histogram based on the RawVATimingMonitor block. More modifications to VARC
	Etc and Sparsification monitoring plots. 4 new histograms added to
	"Checklist plots/Crate Monitor". FarDet OM shift form will have to be modified
	to reflect the change.

2006-02-11 16:19  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/PulserTimeCalScheme.cxx:

	Apply Pedro's suggested bugfixes.
	Pull Andy's walk explicitly into the shield computation, for clarity
	Apply the magic 60/90 gain ratio to andy's walk
	Use the other sign for the t0 correction

2006-02-11 15:44  cbs

	* MCReweight/macros/muonInfo.C:

	Function for ripping the pion/kaon parent info out of the flux files for
	neutrinos where the immediate parent is a muon.

2006-02-11 00:12  Minos CVS group account.  Do not commit from here!

	* RootUtil/TPSTest/TPSTest.cxx:

	Fix a typo in the documentation. Cleanup some long lines.

2006-02-10 23:57  Minos CVS group account.  Do not commit from here!

	* RootUtil/TPSTest/TPSTest.cxx:

	Fix a typo in the documentation

2006-02-10 23:05  Minos CVS group account.  Do not commit from here!

	* RootUtil/TPSTest/: GNUmakefile, LinkDef.h, TPSTest.cxx,
	  TPSTest.h, macro/Contrast.C, macro/MakeContrastPlots.C,
	  macro/MakeValidationPlots.C, macro/Validation.C,
	  macro/compTests.C:

	Add the sub-package TPSTest.

	TPSTest

	"Point Significance Test"

	Hypothesis test of the assumption that two TH1 objects were filled
	from the same probability distribution. A maximum likelihood method
	is used to find the most likely source PDF bin-by-bin. The resulting
	probability is the confidence level of the hypothesis that the input
	TH1 objects are the result of Poisson distributed fluctuations about
	the maximum likelihood fit distribution.

	The returned significance is more stable and potentially more powerful
	over repeated trials than the TH1::Chi2Test or TH1::KolmogorovTest.

	macros directory contains example scripts including comparisons of the
	performance of this test against the TH1::Chi2Test and
	TH1::KolmogorovTest tests.

2006-02-10 22:57  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataQualityModule.cxx,
	  DirectCompareModule.cxx, EfficiencyPurityModule.cxx, LinkDef.h,
	  RecoMonitoring.cxx, macros/dataQualityCheck.C,
	  macros/weeklyCheck.C:

	make changes to correspond to the changes in the NCUtils package and
	AnalysisNtuples package

2006-02-10 21:46  George Irwin <gmieg@slac.stanford.edu>

	* CVSROOT/check_access:

	Add blake to CandMorgue.

2006-02-10 21:36  boehm

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	Backporting division by zero error protection into the R1-21 version to finish up the validation processing.

2006-02-10 21:07  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/Module/CondensedNtpModuleNC.cxx:

	set the criteria for determining the primary shower to be 0,0 - ie the
	primary shower will be the one in the shw[0] position as agreed at the
	reco meeting on 2/9/06.  other cuts still apply, but they can be made
	at the analysis level rather than the ntuple making level

2006-02-10 20:47  Robert Hatcher <rhatcher@fnal.gov>

	* WebDocs/doxygen/package_index.pl:

	Catch and classify a few more .h files.  Doxygen has some funky naming
	scheme in the case of .h files that aren't classes (e.g. function prototypes
	or structures) and if the file name contains underscores.  Attempt to handle
	those two cases when building the ByPackage.html index.  Also just skip
	LinkDef.h files at this time (their .html naming is stranger yet, apparently
	<package>_2LinkDef_8h.html)

2006-02-10 20:37  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisModule.cxx,
	  NCAnalysisUtils.cxx, NCAnalysisUtils.h:

	now the ANtpHeaderInfo object carries around whether the event is MC or Data,
	so use that when determining how to correct the momentum from range or
	whether a spill is good or not

2006-02-10 20:26  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/: PulserTimeCalScheme.cxx, PulserTimeCalScheme.h:

	Change default to NOT applying pulser time calibrations, since we know it's buggy anyway.
	Change default to Andy's calibrations, which are currently industry-standard.

	Add Pedro's shield calibrations.  Untested.

2006-02-10 20:15  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpHeaderInfo.cxx, ANtpHeaderInfo.h,
	  Module/ANtpInfoObjectFiller.cxx:

	add data member to ANtpHeaderInfo that records the sim flag for the event -
	(int)SimFlag::kData/kMC

	that way can adjust cuts accordingly.

2006-02-10 20:08  litchfld

	* MeuCal/MeuAnalysis.cxx:

	Modifications to the FilterLI method(s).

	The time-window (to filter singles) has been debugged so that it dosen't throw away single ended hits.
	The asymmetry requirement is waived for very large LI snarls, (because the VAs on the flashed side saturate.)

2006-02-10 18:02  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h, NCType.h:

	merge the IsGoodBeamEvent and IsGoodBeamSnarl methods to select the different
	algorithms, but users only ever need call the generic method.

2006-02-10 17:34  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: LinkDef.h, NCAnalysisCuts.cxx, NCAnalysisCuts.h,
	  NCAnalysisModule.cxx, NCAnalysisUtils.cxx, NCAnalysisUtils.h,
	  NCExtractionADM.cxx, NCExtractionBR.cxx, NCExtractionDP.cxx,
	  NCExtractionDP.h, NCType.h, macros/ncccSeparation.C:

	add extraction algorithm based on the CC PID analysis

	change the structure of NCAnalysisCuts to set data members holding info
	objects and remove the arguements to the different methods.  make the
	default beam fiducial volume determination be the oxford algorithm.

2006-02-10 14:47  Nick West <n.west1@physics.oxford.ac.uk>

	* DocBuilder/GNUmakefile:

	RDBC's dependency on RDBCodbc is now exposed

2006-02-10 14:42  marshall

	* CandFitTrackCam/AlgFitTrackCam.cxx:

	Made improvements to the checks that guard against division by zero.

2006-02-10 14:15  Nick West <n.west1@physics.oxford.ac.uk>

	* JobControl/JobCEnv.cxx:

	Downgrade the object caught in the "last chance saloon" from a
	TSQLException* to a TObject*, so as not to couple JobControl to RDBC
	and hence complicate the building of special applications such as
	Rotorooter.

2006-02-10 12:31  Nick West <n.west1@physics.oxford.ac.uk>

	* RDBC/rdbc/TSQLDriverManager.cxx:

	For backward compatibility (when ProcessLineFast was used) treat the p/wd \0 as a null string.

2006-02-10 09:09  Nick West <n.west1@physics.oxford.ac.uk>

	* JobControl/JobCEnv.cxx:

	Catch any TSQLException*. It's too late to recover, but does at least
	provide some diagnostic to help fix the missed catch.

2006-02-10 09:08  Nick West <n.west1@physics.oxford.ac.uk>

	* RDBC/rdbc/TSQLDriverManager.cxx:

	Directly call ODBC implementation instead of calling TROOT:ProcessLineFast.
	which was loosing C++ exceptions.  Philippe subsequently explained that
	standard C++ exception handling can be enabled/disabled using:-
	   gROOT->ProcessLine(".exception");
	but by then I had changed to code and made it more transparent e.g

	 con = new ODBCConnection(dsn.Data(),user.Data(),pswd.Data());

	is clearer than:-

	 con = (TSQLConnection*) gROOT->ProcessLineFast(Form(
	    "new ODBCConnection(\"%s\",\"%s\",\"%s\")",dsn.Data(),user.Data(),pswd.Data()));

2006-02-10 09:08  Nick West <n.west1@physics.oxford.ac.uk>

	* RDBC/rdbc/TSQL.cxx:

	Throw TSQLException*  C++ exception instead of Emitting a TSQLException*
	ROOT signal which was getting lost.

2006-02-10 09:08  Nick West <n.west1@physics.oxford.ac.uk>

	* RDBC/rdbc/Makefile.SRT:

	Allow RDBC to directly access odbc.

2006-02-10 09:07  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/DbmValidate.cxx:

	Avoid handling exceptions by using DbiStatement instead of TSQLStatement.

2006-02-10 09:07  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/DbmModule.cxx:

	Respond to new DbiStatement API.
	Protect against RDBC exceptions.

2006-02-10 09:06  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseUpdater/: DbuDaqConfigFilesText.cxx,
	  DbuDaqMonitorModule.cxx:

	Protect against RDBC exceptions.

2006-02-10 09:05  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/doc/ChangeLog:

	Major reworking of error handling between DBI and RDBC.

2006-02-10 09:05  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/test/TestDbi.cc:

	Respond to new Dbi and DbiStatement API.
	Create a TApplication.  It should always have done this but
	omission was benign while RDBC called TROOT:ProcessLineFast(...)

2006-02-10 09:05  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: DbiExceptionLog.cxx, DbiExceptionLog.h,
	  LinkDef.h:

	Add class to hold a record of database exceptions.

2006-02-10 09:05  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: DbiStatement.cxx, DbiStatement.h:

	API change:
	  Rename PrintWarnings(Int_t) to PrintExceptions(Int_t)
	         AppendWarnings()     to AppendExceptionLog(TSQLException*)
	         ClearWarnings()      to ClearExceptionLog()
	  Replace  const TList* GetWarnings()
	       by  const DbiExceptionLog& GetExceptionLog()
	State change:
	  Replace  TList fWarnings;
	       by  DbiExceptionLog fExceptionLog;
	Protect against RDBC exceptions and record in owned DbiExceptionLog.

2006-02-10 09:04  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/DbiSqlValPacket.cxx,
	  DatabaseInterface/test/DbiValidate.cc,
	  DatabaseUpdater/DbuDaqFileSummary.cxx,
	  DatabaseUpdater/DbuRunSummary.cxx:

	Respond to new DbiStatement API.

2006-02-10 09:04  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: DbiDBProxy.cxx, DbiResultSet.cxx:

	Respond to new DbiStatement API.
	Protect against RDBC exceptions.

2006-02-10 09:04  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: DbiConnection.cxx, DbiConnection.h:

	API change: rename (no change in functionality)
	   PrintWarnings(...) to PrintExceptions(...)
	Protect against RDBC exceptions.

2006-02-10 09:03  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/DbiCascader.cxx:

	Respond to new Dbi and DbiStatement API.

2006-02-10 09:03  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/: Dbi.cxx, Dbi.h:

	API change: rename (no change in functionality)
	   PrintWarnings(...) to PrintExceptions(...)

2006-02-10 00:03  avva

	* Contrib/sergei/ProcessFitSA/: FitHists.h, PlotFitSA.C,
	  ProcessFitSAModule.cxx:

	Added prange histogram, fixed ndf bug.

2006-02-09 22:44  avva

	* Contrib/sergei/ProcessFitSA/: PlotFitSA.C,
	  ProcessFitSAModule.cxx:

	Changed hbegin binning, added more plots.

2006-02-09 22:22  Liz Buckley-Geer <buckley@fnal.gov>

	* WebDocs/cvs-rep.html:

	modified instructions on whom to send your ssh key file to

2006-02-09 20:04  Robert Hatcher <rhatcher@fnal.gov>

	* CVSROOT/: check_access, modules:

	create new package "MCMonitor" for Kregg Arms.

2006-02-09 20:02  Robert Hatcher <rhatcher@fnal.gov>

	* MCMonitor/.cvsignore:

	Initial revision

2006-02-09 20:02  Robert Hatcher <rhatcher@fnal.gov>

	* MCMonitor/.cvsignore:

	create package for Kregg Arms.

2006-02-09 06:06  avva

	* Contrib/sergei/ProcessFitSA/ProcessMCSpectrometer.C:

	Fixed a typo.

2006-02-09 05:31  avva

	* Contrib/sergei/ProcessFitSA/: ProcessDataSpectormeter.C,
	  ProcessDataSpectrometer.C, ProcessMCSpectormeter.C,
	  ProcessMCSpectrometer.C:

	Typo - renamed spectrometer scripts.

2006-02-09 05:05  avva

	* Contrib/sergei/ProcessFitSA/ProcessFitSAModule.cxx:

	Added periodic printing of # records processed.

2006-02-09 04:58  avva

	* Contrib/sergei/ProcessFitSA/: FitCuts.h, FitHists.h, PlotFitSA.C,
	  ProcessDataCalorimeter.C, ProcessDataSpectormeter.C,
	  ProcessFitSAModule.cxx, ProcessFitSAModule.h,
	  ProcessMCCalorimeter.C, ProcessMCSpectormeter.C:

	Added histograms for SR fitter comaprisons.

2006-02-09 00:29  avva

	* Contrib/sergei/ProcessFitSA/: PlotFitSA.C, ProcessData.C,
	  ProcessFitSAModule.cxx, ProcessFitSAModule.h, ProcessMC.C:

	Added a script to plot histograms.

2006-02-08 22:51  bspeak

	* setup/: setup_minossoft_umn.csh, setup_minossoft_umn.sh:

	A rewrite of the setup scripts to allow for multiple root builds for a
	single minossoft release.

2006-02-08 18:47  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* CandChop/DBtxt_AlgChopListSharp2_default.C:

	fix the labelling of this algorithm config.

2006-02-08 18:25  asousa

	* CVSROOT/check_access:

	Giving Phill write access to MeuCal so he can do some committing.

2006-02-08 18:15  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseInterface/DbiStatement.cxx:

	Downgrade appending of error message to Debug; if it's a problem it will shout later

2006-02-08 17:30  avva

	* Contrib/sergei/ProcessFitSA/: GNUmakefile, LinkDef.h,
	  ProcessFitSA.C, ProcessFitSAModule.cxx, ProcessFitSAModule.h:

	A simple module to process NtpFitSARecord ntuples and fill histograms.

2006-02-08 15:50  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: EfficiencyPurityModule.cxx,
	  EfficiencyPurityModule.h:

	change to the calling of how to select the tracks for the efficiency module

2006-02-08 15:44  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	add in a fiducial volume cut based on the CC analysis

2006-02-08 14:53  raufer

	* AnalysisNtuples/ANtpEventInfoNC.cxx:

	Set variables to ANtpDefVal defaults rather than 0. at construction. Should have been like that in the first place.

2006-02-08 13:15  cbs

	* Contrib/cbs/PlotOrg/: GNUmakefile, LinkDef.h,
	  Plot1DHistogram.cxx, Plot1DHistogram.h, Plot2DHistogram.cxx,
	  Plot2DHistogram.h, PlotDirectory.cxx, PlotDirectory.h,
	  PlotHistType.cxx, PlotHistType.h, PlotMaker.cxx, PlotMaker.h,
	  PlotManager.cxx, PlotManager.h, macros/RecoFile.C,
	  macros/RunComp.C:

	Package for organizing plots.

2006-02-08 12:45  Minos CVS group account.  Do not commit from here!

	* Contrib/Documents/CalibBoxOpenDoc/calib.tex:

	Update on drift estimate, taking Justin's study into account

2006-02-08 05:18  avva

	* CandFitTrackSA/Ntp/NtpFitSARecord.cxx:

	Removed use of Tracer object, otherwise NtpFitSA library can not be loaded by itself.

2006-02-08 00:16  boehm

	* AnalysisNtuples/Module/ANtpInfoObjectFiller.cxx:

	Adding some error protection in case the reconstructed lepton energy is ever less than the lepton mass.

2006-02-07 23:04  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitTrackSA/: FitContext.cxx, PlaneData.h,
	  TrackEstimatorFixed.cxx, TrackEstimatorFixed.h,
	  TrackEstimatorRange.cxx, TrackEstimatorRange.h:

	Convert DOS format files (extra \r's) to unix format.

2006-02-07 23:03  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitTrackSA/TrackEstimator.h:

	For ROOT versions >= 5.08/00 use #include "TMatrixDfwd.h" rather than
	"class TMatrixD;" to avoid conflict.
	Also convert DOS format file (extra \r's) to unix format.

2006-02-07 23:02  Robert Hatcher <rhatcher@fnal.gov>

	* CandFitTrackSA/GNUmakefile:

	add ROTOCINTFLAGS -p to handle ROOT_VERSION macro in TrackEstimator.h

2006-02-07 22:49  avva

	* CandFitTrackSA/DataFT.cxx:

	Protect against dividing by zero.

2006-02-07 18:01  kordosky

	* Mad/: MadDpID.cxx, MadMKAnalysis.cxx:

	why didn't these commit before?

2006-02-07 17:59  kordosky

	* Mad/macros/MakePanMK.C:

	remove fiducial in pid code. implement Mark D suggestion for associating beam monitoring data with given event. lower Dbi loglevel in macro.

2006-02-07 16:26  boehm

	* NueAna/ANtpAnalysisInfoAna.cxx:

	Modifying the warning message when the 3d hits aren't set and giving it a cutoff

2006-02-07 12:02  Nick West <n.west1@physics.oxford.ac.uk>

	* MessageService/MsgTripWire.cxx:

	Use getenv not gSystem->Getenv to make MessageService independent of ROOT

2006-02-06 23:03  tjyang

	* Calibrator/PulserLinearityCalScheme.cxx:

	correct an error in the message printing

2006-02-06 22:25  bishai

	* BeamData/java/NuMIMon/: swicConstants.txt, pedConstants.txt:

	New pedestals

2006-02-06 16:03  Brett Viren <bv@bnl.gov>

	* setup/: msrt, usepackage/config.h:

	Fix bad comment/blank line removal from packages file as found by Nick

2006-02-06 15:56  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* RootUtil/: ValueErr.cxx, ValueErr.h:

	Copy over the ValueErr classes, which ARE of general utility and maybe could be
	promoted into ROOT.

	The orignal copies remain in Calibrator, and will continue to do so until
	RootUtil becomes part of the standard Loon build.

	For those who haven't used them: the ValueErr template (with the concrete
	implimentations FloatErr and DoubleErr) provide a seamless way of manipulating
	numbers that have uncorrelated gaussian errors; basically, what we all learned
	how to do handle errors in undergraduate physics lab. Automatic
	promotion/demotion, all the usual overloaded operators are in place,
	it's lightweight and intuitive. Not well documented yet, though.

2006-02-06 10:27  asousa

	* Monitoring/ErrorBlockAnalysis.cxx:

	Modified the Etc error map to explicitly display vmm location and changed the
	filling of the Etc vs time frame and Etc vs crate number plots so that the
	displayed number of entries is consistent throughout.

2006-02-04 21:47  avva

	* CandFitTrackSA/: AlgFitTrackSA.cxx, AlgFitTrackSA.h,
	  ConvergenceMaster.cxx, DBtxt_AlgFitTrackSA_default.C,
	  FitResult.h, FitStateConverged.cxx, FitStateDiverged.cxx,
	  FitStateFinal.cxx, FitStateInitial.cxx, TrackFilterBFCalibND.cxx,
	  TrackFilterFactory.cxx, TrackFilterFactory.h:

	Added TrackFilterFactory, choice of track filter is made in alg config.
	Added $$ around Id: to in several files where I forgot them.

2006-02-04 21:16  cbs

	* Mad/MadQuantities.cxx:

	Expanded the definitions for valid nucleus codes.

2006-02-04 18:50  vahle

	* MCReweight/macros/ExamplePanReweighting.C:

	An example macro showing how to use MCReweight on pans, also useful in testing new versions of reweighting softwar

2006-02-04 08:29  avva

	* CandFitTrackSA/DataFT.cxx:

	Uncomment a line that was producing a semicolon related error.

2006-02-04 08:23  avva

	* CandFitTrackSA/: AlgFitTrackSA.cxx, AlgFitTrackSA.h,
	  AlgFitTrackSAList.h, CandFitTrackSA.h, CandFitTrackSAHandle.h,
	  DBtxt_AlgFitTrackSA_default.C, DataFT.cxx, DataFT.h,
	  FitContext.cxx, TrackEstimatorFixed.cxx,
	  TrackFilterBFCalibND.cxx:

	Removed obsolete config parameters from DBtxt_AlgFitTrackSA_default.C.
	Removed some stray semicolons (gcc 3.3 does not complain about them,
	but 3.4 won't compile).

2006-02-04 08:08  Nick West <n.west1@physics.oxford.ac.uk>

	* setup/packages-S06-02-02-R1-21:

	SoftRelTools version is HEAD not S06-02-02-R1-21

2006-02-04 07:14  avva

	* CandFitTrackSA/: AlgFitTrackSA.cxx, AlgFitTrackSA.h,
	  AlgFitTrackSAList.cxx, AlgFitTrackSAList.h, BFieldFT.cxx,
	  BFieldFT.h, CandFitTrackSA.cxx, CandFitTrackSAHandle.cxx,
	  CandFitTrackSAList.cxx, CandFitTrackSAList.h,
	  CandFitTrackSAListHandle.cxx, CandFitTrackSAListHandle.h,
	  ConstFT.h, ConvergenceMaster.cxx, ConvergenceMaster.h,
	  DBtxt_AlgFitTrackSA_default.C, DataFT.cxx, DataFT.h,
	  FitContext.cxx, FitContext.h, FitResult.cxx, FitResult.h,
	  FitState.cxx, FitState.h, FitStateConverged.cxx,
	  FitStateConverged.h, FitStateDiverged.cxx, FitStateDiverged.h,
	  FitStateFactory.cxx, FitStateFactory.h, FitStateFinal.cxx,
	  FitStateFinal.h, FitStateInitial.cxx, FitStateInitial.h,
	  FitStateIterating.cxx, FitStateIterating.h,
	  FitTrackSAListModule.cxx, FitTrackSAListModule.h, GeoFT.cxx,
	  GeoFT.h, GeometryHelper.cxx, GeometryHelper.h, GridBuilder.cxx,
	  GridBuilder.h, GridBuilderTH2.cxx, GridBuilderTH2.h,
	  Interval.cxx, Interval.h, IterationState.cxx, IterationState.h,
	  LinkDef.h, MatrixCalculator.cxx, MatrixCalculator.h, PlaneData.h,
	  SuperIterationState.cxx, SuperIterationState.h, TracerSA.cxx,
	  TracerSA.h, TrackContext.cxx, TrackContext.h, TrackEstimator.h,
	  TrackEstimatorFixed.cxx, TrackEstimatorFixed.h,
	  TrackEstimatorRange.cxx, TrackEstimatorRange.h, TrackFilter.h,
	  TrackFilterBFCalibND.cxx, TrackFilterBFCalibND.h,
	  TrackSegment.cxx, TrackSegment.h, TrackSegmentMaker.h,
	  TrackSegmentMakerDummy.cxx, TrackSegmentMakerDummy.h,
	  Ntp/LinkDef.h, Ntp/NtpFitSA.cxx, Ntp/NtpFitSA.h,
	  Ntp/NtpFitSABFieldCalib.cxx, Ntp/NtpFitSABFieldCalib.h,
	  Ntp/NtpFitSAFit.cxx, Ntp/NtpFitSAFit.h, Ntp/NtpFitSAFitSR.cxx,
	  Ntp/NtpFitSAFitSR.h, Ntp/NtpFitSAPlane.cxx, Ntp/NtpFitSAPlane.h,
	  Ntp/NtpFitSARecord.cxx, Ntp/NtpFitSAVtx.cxx, Ntp/NtpFitSAVtx.h,
	  NtpModule/NtpFitSAModule.cxx:

	Massively updated version of the SA fitter. Functionality is geared towards
	verifying/calibrating magnetic field in the ND and (possibly) FD.

2006-02-03 23:03  tjyang

	* Calibrator/: PulserLinearityCalScheme.cxx,
	  PulserLinearityCalScheme.h, macros/testLinearity.C:

	add PulserLinearityCalScheme::DecalLinearity() to decalibrate the MC

2006-02-03 22:17  tjyang

	* NueAna/Display/NueDisplayModule.cxx:

	added support for NtpSR
	modified the zooming feature

2006-02-03 21:07  jpochoa

	* CandShield/: CandShieldSR.cxx, ShieldGeom.cxx, ShieldProj.cxx:

	Added warning and debug messages all around. Also added protection so that code does not try to sample an array with a weird index (namely -1).

2006-02-03 20:39  Robert Hatcher <rhatcher@fnal.gov>

	* GeoGeometry/: GeoGeometry.cxx, GeoGeometry.h:

	For GetSteelPlnNodeMap() enforce "in main body of detector" by explicitly
	requiring IsVetoShield() to be false (cuts FarDet shield + CalDet floor plns).

	In GetNearestSteelPlnNode(z) don't determine distances by doing two
	coordinate transforms, but rather use the z0 info stored in the
	map returned by GetSteelPlnNodeMap().  This is a huge time savings.
	The empirical differences between the two methods showed up never more
	than 1.5 micrometer differences in the plane to choose.  Even this
	small difference probably arises from the map being key'ed off a Float_t
	rather than a Double_t.

	Make several "logical const" methods "const".  These methods don't
	actually change the geometry, but were non-const because they fill
	caches.  This can be overcome by making the cache member data "mutable".

2006-02-03 11:58  litchfld

	* AnalysisNtuples/Module/: ANtpInfoObjectFiller.cxx,
	  ANtpInfoObjectFiller.h:

	Remove (comment out) depriciated FillHeaderInfo() method.
	If you are making hybridised AnalysisNtuples and the module stops working you could uncomment the code, but switching to the newer version is better.

	Some reformatting of code. (Less long lines makes it easier to follow on the sort of low-cost, low-res display a grad student might have at home.)

2006-02-03 04:18  dap56

	* Mad/MadDpAnalysis.cxx:

	Changed conditions for calculating PID in FD

2006-02-03 04:12  dap56

	* Monitoring/: DigitAnalysis.cxx, FileMain.h, MonState.cxx,
	  MonState.h, Producer_dispatcher.cc, SinglAnalysis.cxx,
	  killmon.csh, near.config:

	Use Dispatcher selection cuts for ND Physics data to keep up with 4/5 plane trigger rate

	Added new pedestal checking plots (differences between raw and truncated means, rms)

	changed the range on FD singles rate frequency plot

2006-02-02 23:19  niki

	* Mad/AnnInputBlock.h:

	.h

2006-02-02 23:19  niki

	* Mad/AnnInputBlock.cxx:

	Added variable

2006-02-02 21:19  niki

	* Mad/MadCluAnalysis.cxx:

	Fixed the way is was using SpillInfo class

2006-02-02 21:19  niki

	* Mad/MadTestAnalysis.h:

	.h file

2006-02-02 21:19  niki

	* Mad/MadTestAnalysis.cxx:

	 Since MadTestAnalysis is a copy (do we need it?) of MadDpAnalysis I made the changes there as well...

2006-02-02 21:18  niki

	* Mad/SpillInfo.cxx:

	Re-implement my code (to make is fast, as it was at the beggining...)

2006-02-02 21:18  niki

	* Mad/: MadDpAnalysis.h, SpillInfo.h:

	.h

2006-02-02 21:17  niki

	* Mad/MadDpAnalysis.cxx:

	Changes to that speed up code.

2006-02-02 20:07  dbox

	* DatabaseTables/scripts/cp_table_minosdb.pl:

	had to add new data type (-4)

2006-02-02 19:15  hartnell

	* MeuCal/macros/nearValidate/: mPlanes.C, mXY.C:

	Changes to improve blessed plots.

2006-02-02 19:14  hartnell

	* MeuCal/MeuPlots.cxx:

	More plots

2006-02-02 18:13  George Irwin <gmieg@slac.stanford.edu>

	* setup/packages-S06-02-02-R1-21:

	First commit

2006-02-01 20:44  niki

	* Mad/MadDpAnalysis.h:

	.h of the updates

2006-02-01 20:44  niki

	* Mad/MadDpAnalysis.cxx:

	Updates...

2006-02-01 20:17  kordosky

	* Mad/MadMKAnalysis.cxx:

	add shower truth/ completeness.

2006-02-01 20:04  Robert Hatcher <rhatcher@fnal.gov>

	* RunSummary/: FarmListModule.cxx, FarmListModule.h,
	  FilterRunType.cxx, RunFileModule.cxx, RunFileModule.h,
	  RunSummary.cxx, RunSummary.h, UtilRSM.cxx, rundmc.cc:

	Convert from DetectorType:: to Detector::.

2006-02-01 19:22  Robert Hatcher <rhatcher@fnal.gov>

	* OfflineTrigger/: OltBlockScan.h, OltDataIntegrity.h, OltEnds.h,
	  OltNewModule.cxx, OltNewModule.h, OltRawLI.h, OltTimePlot.cxx,
	  OltTimePlot.h, OltTimeScan.h:

	Convert from DetectorType:: to Detector::.  Also remove some unnecessary
	#include lines (especially Conventions/DetectorType.h).

2006-02-01 18:13  Robert Hatcher <rhatcher@fnal.gov>

	* AtNuReco/: AlgAtNuReco.cxx, AlgAtNuRecoMCTruth.cxx,
	  AlgFitTrackAtNu.cxx, AlgShowerAtNu.cxx, AlgTrackAtNu.cxx,
	  AtNuFindModule.cxx:

	Convert from DetectorType:: to Detector::.  Also remove a few unnecessary
	#include "Conventions/DetectorType.h" (Detector.h is pulled via VldContext.h).

2006-02-01 14:57  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	remove dependence on derived classes when the methods only make use of
	variables in the base classes

2006-02-01 14:56  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: EfficiencyPurityModule.cxx,
	  EventRatePlotModule.cxx, RecoMonitoring.cxx:

	lots of changes for cosmetic reasons

2006-01-31 23:49  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/EfficiencyPurityModule.cxx:

	do the configuration correctly

2006-01-31 23:45  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/EfficiencyPurityModule.cxx:

	write the correct histograms to file

2006-01-31 23:40  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/EventRatePlotModule.h:

	helps to commit the .h file too

2006-01-31 23:33  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/EventRatePlotModule.cxx:

	calculate the mean rate as stan requested it.

2006-01-31 23:01  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/EfficiencyPurityModule.cxx:

	final commit to be able to draw the efficiency plots

2006-01-31 22:26  Sue Kasahara <schubert@hep.umn.edu>

	* ParticleTransportSim/: PTSimModule.cxx, PTSimParticle.cxx:

	Bug fix to PTSimModule::ClearStdHepSecondaries() method responsible
	for removing secondaries from input particle stack received from gminos.
	Modify PTSimParticle::Print method.

2006-01-31 22:23  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: EfficiencyPurityModule.cxx,
	  EfficiencyPurityModule.h, EventRatePlotModule.cxx,
	  EventRatePlotModule.h, RecoMonitoring.cxx:

	fill and draw the Efficiency plots, protect against a funky seg fault in
	RecoMonitoring.  minor changes to EventRatePlotModule

2006-01-31 21:18  cbs

	* CandEventSR/: AlgEventSRList.cxx, AlgEventSSList.cxx:

	Updated AlgEventSSList to fix AddStripAtEvent() bug that meant some strips
	would be added to a shower but not to one of it's daughter subshowers.
	Updated AlgEventSRList to reflect R1.18.2 version but with some bugs fixed.

2006-01-31 20:29  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	add in method to select FD tracks based on info in docdb #1466

2006-01-31 18:06  tjyang

	* Calibrator/macros/testLinearity.C:

	add a macro to demonstrate the linearity calibration

2006-01-31 16:07  cbs

	* CandShowerSR/AlgShowerSSList.cxx:

	Fix to reset histograms each slice.
	Also, added check to ensure that peak positions returned by TSpectrum are
	in ascending order.

2006-01-31 08:00  Nick West <n.west1@physics.oxford.ac.uk>

	* DatabaseMaintenance/scripts/get_standard_data_type.pm:

	Add ORACLE SQL_TYPE_TIMESTAMP 93

2006-01-30 20:57  zarko

	* MCReweight/: Zfluk.cxx, Zfluk.h:

	Removed one parameter from SKZP (par[2])
	Redefined par[3] (low pT) and par[4] (kaons) in SKZP,
	and par[5] (kaons) in TV, so that they are just numbers.
	They are not multiplicative factors of sigma distortions any more.

2006-01-30 20:53  zarko

	* MCReweight/: Zbeam.cxx, Zbeam.h:

	Updated beam width error vectors for ME and HE
	Put back hadron production error as nEffect=7

2006-01-30 20:51  zarko

	* MCReweight/data/: err_beamwidth_le100_far.vec,
	  err_beamwidth_le100_farovernear.vec,
	  err_beamwidth_le100_farovernear.vec~,
	  err_beamwidth_le100_near.vec, err_beamwidth_le250_far.vec,
	  err_beamwidth_le250_farovernear.vec,
	  err_beamwidth_le250_near.vec:

	[no log message]

2006-01-30 20:17  Robert Hatcher <rhatcher@fnal.gov>

	* NueAna/NueModule.cxx, ParticleTransportSim/PTSimApplication.cxx,
	  ParticleTransportSim/PTSimModule.cxx:

	TFile.h used to be picked up via complicated dependency; recent change to
	ROOT has made this a simple forward declaration, so we need to explicitly
	include TFile.h.

2006-01-30 20:16  Robert Hatcher <rhatcher@fnal.gov>

	* NueAna/NueSensitivity.cxx:

	Recent change to ROOT meant TClonesArray.h was not longer being included
	(only a forward declaration).  Explicitly include it now.  Also change
	a couple references to DetectorType:: to Detector::.

2006-01-30 20:07  Robert Hatcher <rhatcher@fnal.gov>

	* DataUtil/: GetUgliGeomHandle.h, GetDetectorBins.cxx:

	Convert from using DetectorType:: to Detector::.

2006-01-30 20:04  Robert Hatcher <rhatcher@fnal.gov>

	* BeamDataUtil/BeamMonFileSummary.cxx, DataUtil/RawRecCounts.cxx:

	TFile.h used to be picked up via complicated dependency; recent change to
	ROOT has made this a simple forward declaration, so we need to explicitly
	include TFile.h.

2006-01-30 20:01  Robert Hatcher <rhatcher@fnal.gov>

	* BeamDataUtil/BMSpillAna.cxx:

	It's Munits::mm not Munits:mm (two colons delineate a namespace).

2006-01-30 17:16  mdier

	* BeamDataUtil/: BMSpillAna.cxx, BMSpillAna.h:

	Never select spills that have a fit failure in the gaussian fit to the last profile monitor before the target (occurs for less than 0.04% of the spills). In such cases, the database gets filled by a large negative value (-999). The code now rejects spills with a beam width <-0.1mm. Beam widths of zero means that the profile monitor is taken out of the beam pipe.

2006-01-30 16:52  litchfld

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	Change InBeamFiducialVolume() and InBeamFiducialVolumeOx() methods to use a detector based fiducal cut in the ND (50cm from a UV-averaged partial plane edge).

	InBeamFiducialVolume() can be configured using the method SetFiducialEdgeCut(double), but InBeamFiducialVolumeOx() is fixed (as a record of what we in Oxford currently think is sensible.)

2006-01-30 11:38  raufer

	* AnalysisNtuples/Module/ANtpInfoObjectFillerNC.cxx:

	Make sure, emFrac is set to a non-physical value in case of cluster array failure mode.

2006-01-30 11:22  raufer

	* AnalysisNtuples/Module/ANtpInfoObjectFillerNC.cxx:

	Protect against very rare failure mode:

	Sometimes, the shw.clu variable seems to give -1, event though the shw.ncluster variable is non-zero. This caused a crash when doing "fClusterArray->At(..)".
	The condition is now caught and an error message printed.

2006-01-29 19:17  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/ANtpHeaderInfo.h:

	oops - increment the class def number

2006-01-29 19:09  Brian Rebel <brebel@fnal.gov>

	* AnalysisNtuples/: ANtpHeaderInfo.cxx, ANtpHeaderInfo.h,
	  Module/ANtpInfoObjectFiller.cxx:

	add the snarl trigger time to the ANtpHeaderInfo object

2006-01-29 15:44  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: MarquardtFitModule.cxx, MqfType.cxx, MqfType.h:

	change the order of neugen variables in MqfType.  Draw the gradients in a
	nice way in the module

2006-01-29 14:55  kordosky

	* Mad/MadMKAnalysis.cxx:

	remove beam reweighting. every so often (1/1000) it cannot seem to read the reweighting files, upon which the code asserts... must be afs/nfs related.

2006-01-29 14:24  kordosky

	* Mad/MadMKAnalysis.cxx:

	guessed wrong

2006-01-29 12:42  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	remove check on good spill from IsGoodBeamSnarlBR for the near det

2006-01-29 12:40  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: EfficiencyPurityModule.cxx,
	  EfficiencyPurityModule.h, EventRatePlotModule.cxx,
	  RecoMonitoring.cxx:

	add module for finding tracking efficiencies.  also make cosmetic changes
	to other files

2006-01-29 00:47  zarko

	* MCReweight/: Zfluk.cxx, Zfluk.h,
	  data/err_beamwidth_le010_far.vec,
	  data/err_beamwidth_le010_farovernear.vec,
	  data/err_beamwidth_le010_near.vec,
	  data/err_beamwidth_le100_far.vec,
	  data/err_beamwidth_le100_far.vec~,
	  data/err_beamwidth_le100_farovernear.vec,
	  data/err_beamwidth_le100_farovernear.vec~,
	  data/err_beamwidth_le100_near.vec,
	  data/err_beamwidth_le100_near.vec~,
	  data/err_beamwidth_le250_far.vec,
	  data/err_beamwidth_le250_far.vec~,
	  data/err_beamwidth_le250_farovernear.vec,
	  data/err_beamwidth_le250_farovernear.vec~,
	  data/err_beamwidth_le250_near.vec,
	  data/err_beamwidth_le250_near.vec~,
	  data/err_beamwidth_le_far.vec,
	  data/err_beamwidth_le_farovernear.vec,
	  data/err_beamwidth_le_near.vec:

	Added Zfluk function that reweighs the hadrons depending
	on their pt-xf.
	Added beamwidth error vectors needed by Zbeam.

2006-01-29 00:44  zarko

	* MCReweight/: LinkDef.h, Zbeam.cxx, Zbeam.h:

	Added beam width effect for ME and HE.
	Removed hadron production from Zbeam.

2006-01-28 20:14  kordosky

	* Mad/: MadMKAnalysis.cxx, MadMKAnalysis.h:

	Oh no.  MadMKAnalysis has been branched. May god help us.

2006-01-28 19:42  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/MarquardtFitModule.cxx:

	implement the method to draw overlays of the different hessian matrix
	elements

2006-01-28 17:37  niki

	* Mad/MadDpAnalysis.cxx:

	Energy corrections are picked up with this version of MadDpAnalysis

2006-01-28 17:37  niki

	* Mad/MadQuantities.h:

	commit .h file

2006-01-28 17:36  niki

	* Mad/MadQuantities.cxx:

	Added code (for 18_2 only I guess) to take into account energy corrections
	in shower and muon energy.
	This code will be modified in next releases that persumably (hopefuly)
	won;t need these corrections

2006-01-28 00:59  dap56

	* Mad/MadDpAnalysis.cxx:

	Added mc flux info tpx,tpy,tpz,tptype to PAN ntuple for use in xf,pt
	reweighting

2006-01-27 19:58  kordosky

	* Mad/data/: README, dp_pdf_far_le.root, dp_pdf_far_le_R1.16.root,
	  dp_pdf_near_he.root, dp_pdf_near_le.root, dp_pdf_near_me.root:

	[no log message]

2006-01-27 17:19  kordosky

	* Mad/data/: dp_pdf_near_he_R1.16.root, dp_pdf_near_le_R1.16.root,
	  dp_pdf_near_me_R1.16.root:

	archival commit

2006-01-27 17:04  vahle

	* Mad/MadMKAnalysis.cxx:

	Adding flux information to MadMKAnalysis code

2006-01-27 15:38  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/: PEGainCalScheme.cxx, PEGainCalScheme.h:

	Add a tuning handle to the gain calibration:
	  Calibrator::PeCalibrator.Set("TuneGainFactor=1.1");
	will now artifically increase all PMT gains by 10%.

2006-01-27 15:37  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* Calibrator/StripAttenCalScheme.cxx:

	Allow hits outside the strip when decalibrating, so that simulated LI can put
	light into the pigtails.

2006-01-27 15:30  webera

	* Contrib/weber/Validate/: Validate.cxx, Validate.h, ValidateFD.C:

	the latest update

2006-01-27 13:38  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/DataQualityModule.cxx:

	make sure to set all the variables that the IsGoodSpill tests on for the
	MC

2006-01-27 13:38  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	fix one of the beam cuts

2006-01-27 11:18  kordosky

	* Mad/MadMKAnalysis.cxx:

	upgrades

2006-01-27 09:19  cpw1

	* PulserCalibration/PulserGainFit.cxx:

	Fix bug in loop index in FarMeans

2006-01-27 02:51  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/DataQualityModule.cxx:

	start the baseline in may 2005

2006-01-27 02:45  Brian Rebel <brebel@fnal.gov>

	* NCUtils/: NCAnalysisCuts.cxx, NCAnalysisCuts.h:

	add a method to determine the quality of a beam spill.  this is just a
	pirated version of the BMSpillAna code, but allows me to avoid having to
	remake my ntuples just now.  eventually it will just return the
	ANtpBeamInfo->goodSpill value which is filled by the BMSpillAna::SelectSpill
	return value

2006-01-26 23:41  kordosky

	* Mad/: MadMKAnalysis.cxx, MadMKAnalysis.h, macros/EvDisplayList.C:

	upgrades.

2006-01-26 19:26  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/DataQualityModule.cxx:

	a quick change that i may back out again.

2006-01-26 18:38  cbs

	* Mad/MadEvDisplay.cxx:

	Fix for overlapping entries in InteractionDiagram

2006-01-26 16:08  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/DataQualityModule.cxx:

	start beam data with may 2005

2006-01-26 15:48  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/DataQualityModule.cxx:

	final corrections to filling one day event rate plot

2006-01-26 14:13  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataQualityModule.cxx,
	  DirectCompareModule.cxx, RecoMonitoring.cxx:

	more work to fill the hour by hour event rate plot in DataQualityModule.

	make sure you get the right number of momentum bins for cosmic rays when
	doing the direct comparison

	change cut value on TrackStripUseFraction in DirectCompareModule

2006-01-26 10:28  cpw1

	* Calibrator/PulserDriftCalScheme.cxx:

	Fix for new CALPULSERFITS

2006-01-26 00:58  ishi

	* Contrib/ishi/: GeoSwimmer/GeoSwimMCApplication.cxx,
	  TGeoSwimmer/GNUmakefile, TGeoSwimmer/LinkDef.h,
	  TGeoSwimmer/TGeoSwimCondition.h,
	  TGeoSwimmer/TGeoSwimMCApplication.cxx,
	  TGeoSwimmer/TGeoSwimMCApplication.h,
	  TGeoSwimmer/TGeoSwimMCStack.cxx, TGeoSwimmer/TGeoSwimMCStack.h,
	  TGeoSwimmer/TGeoSwimParticle.cxx, TGeoSwimmer/TGeoSwimParticle.h,
	  TGeoSwimmer/TGeoSwimZCondition.cxx,
	  TGeoSwimmer/TGeoSwimZCondition.h, TGeoSwimmer/TGeoSwimmer.cxx,
	  TGeoSwimmer/TGeoSwimmer.h:

	Bug fix in GeoSwimmer/GeoSwimMCApplication.cxx and removal of obsolute
	codes (TGeoSwimmer).

2006-01-26 00:45  ishi

	* Contrib/ishi/TGeoSwimmer/macro/: GNUmakefile,
	  TGeoSwimmer_basiclibs.C, TGeoSwimmer_g3Config.C,
	  TGeoSwimmer_g3libs.C:

	Removed the obsolete version.

2006-01-26 00:40  ishi

	* Contrib/ishi/GeoSwimmer/: GNUmakefile, GeoSwimCondition.h,
	  GeoSwimMCApplication.cxx, GeoSwimMCApplication.h,
	  GeoSwimMCStack.cxx, GeoSwimMCStack.h, GeoSwimParticle.cxx,
	  GeoSwimParticle.h, GeoSwimZCondition.cxx, GeoSwimZCondition.h,
	  GeoSwimmer.cxx, GeoSwimmer.h, LinkDef.h, macro/GNUmakefile,
	  macro/GeoSwimmer_basiclibs.C, macro/GeoSwimmer_g3Config.C,
	  macro/GeoSwimmer_g3libs.C:

	Modifications in alternative Swimmer test programs.
	1. Change name to GeoSwimmer in order to distinguish from ROOT codes.
	2. Backword direction is considered by adding momentum in each step.

2006-01-25 23:16  mdier

	* BeamDataUtil/BDSpillAccessor.cxx:

	The horn current calibration got applied in the wrong direction. The values in the R1_18_2 ntuples are 3.4% lower than they should be. Same for any code dating before Jan 25, 2006 that uses this class to access the database. The horn current is very stable and the different running conditions are far enough apart that they don't mix up. There will be more information on this in a note that will appear soon.

2006-01-25 23:05  mdier

	* BeamDataUtil/: BMSpillAna.cxx, BMSpillAna.h:

	Change the default cut values so they coincide with Sacha's recommended cuts

2006-01-25 20:36  Robert Hatcher <rhatcher@fnal.gov>

	* setup/count_buildlog_warnings:

	weird quoting issue with grep ...

2006-01-25 20:26  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* PhotonTransport/: PhotonInjector.cxx, PhotonInjector.h,
	  macros/li.C:

	Add a simulated light injection package, with an associated macro.
	Seems to work perfectly.... the only problem is that it takes 8 seconds to simulate a single
	LED flash, so it's not very useful.

2006-01-25 19:35  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataQualityModule.cxx,
	  DataQualityModule.h:

	make it possible to plot the hour by hour event rate for a day

2006-01-25 18:32  Nathaniel Tagg <n.tagg1@physics.ox.ac.uk>

	* CandChop/test/GNUmakefile:

	Fix test binary build.

2006-01-25 17:31  Robert Hatcher <rhatcher@fnal.gov>

	* Calibrator/PulserDriftCalScheme.cxx:

	In FitIsOK() comment out line using CalPulserFit::GetNumPoints() because
	that method not longer exists for CalPulserFit.

2006-01-25 16:23  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/MarquardtFitModule.h:

	add in the declaration of the DrawGradientsOverlay method

2006-01-25 16:19  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/GNUmakefile:

	dont forget the makefile

2006-01-25 16:12  Brian Rebel <brebel@fnal.gov>

	* MarquardtFit/: HessianModule.cxx, HessianModule.h,
	  HessianParameter.cxx, HessianParameter.h, LinkDef.h,
	  MarquardtFitModule.cxx, MarquardtFitModule.h,
	  MinosMinimization.cxx, MinosMinimization.h, MqfEnergyBinInfo.cxx,
	  MqfEnergyBinInfo.h, MqfType.cxx, MqfType.h, nr.cxx, nr.h,
	  nrtypes.h, nrtypes_lib.h, nrtypes_nr.h, nrutil.h, nrutil_mtl.h,
	  nrutil_nr.h, nrutil_tnt.h, nrutil_val.h, print_array.h,
	  macros/marquardtFit.C:

	initial commit of Marquardt fitting package

2006-01-25 14:18  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataQualityModule.cxx,
	  DataQualityModule.h:

	move the using namespace AstUtil into the implementation file

2006-01-25 14:17  cpw1

	* PulserCalibration/CheckGC/FitGC.cxx:

	Mods for new definition of CalPulserFits

2006-01-25 14:17  Brian Rebel <brebel@fnal.gov>

	* NCUtils/NCAnalysisCuts.cxx:

	add code to IsGoodBeamSnarl to reject snarls where the pot value is < 0.5e12
	and the goodSpill flag is 0

	also check the julian date for the time when the pot accounting was messed
	up in june

2006-01-25 14:08  cpw1

	* PulserCalibration/macros/create_calpulserfits.mysql:

	Mods for new definition of CalPulserFits

2006-01-25 14:07  cpw1

	* PulserCalibration/PulserGainFit.cxx:

	Mods for new definition of CalPulserFits; split Run method into RunPinFits and RunNearFarFits and add code for near-far fits

2006-01-25 13:54  cpw1

	* PulserCalibration/PulserGainFit.h:

	Mods for new definition of CalPulserFits; split Run method into RunPinFits and RunNearFarFits and add code for near-far fits

2006-01-25 13:52  cpw1

	* PulserCalibration/: PulserGain.h, PulserGain.cxx:

	Make methods ZCMean and ZCError const

2006-01-25 13:48  cpw1

	* Calibrator/: PulserDriftCalScheme.h, PulserDriftCalScheme.cxx:

	Use zero-corrected values and implement checks on fits

2006-01-25 12:46  cpw1

	* Calibrator/: CalPulserFits.h, CalPulserFits.cxx:

	New definition of database table with more columns

2006-01-25 11:45  kordosky

	* Calibrator/LinkDef.h:

	Hopefully fix linker problem associated with the new PulserLinearityCalScheme

2006-01-25 02:22  Brian Rebel <brebel@fnal.gov>

	* DataQualityMonitoring/: DataQualityModule.cxx,
	  DataQualityModule.h:

	add a histogram to look at the event rate for a specific day.  also make
	sure to not set the goodSpill flag to true all the time.