* Information Content of E. coli promoters
* 2006 Oct 14
*
* Supplementary Material for
* 
* Anatomy of Escherichia coli sigma70 promoters
* Ryan K. Shultzaberger, Zehua Chen, Karen A. Lewis and Thomas D. Schneider
*
* Contact:
*
* Dr. Thomas D. Schneider
* National Institutes of Health
* National Cancer Institute
* Center for Cancer Research Nanobiology Program
* Molecular Information Theory Group
* Frederick, Maryland  21702-1201
* toms@ncifcrf.gov
* permanent email: toms@alum.mit.edu (use only if first address fails)
* http://www.ccrnp.ncifcrf.gov/~toms/
* 
* Coordinates are in bases on
* GenBank Accesssion number: U00096
*
* Individual information and gap surprisals are given in bits.
*
*-35_Coord -10_Coord Dist Orient Ri(-35) Ri(-10) GS Ri(total) Gene_Start Gene_name
  12015   12039 -24  1 4.69053 1.97328 2.41864  4.25416   12163 dnaK 
  12090   12112 -22  1 6.43266 2.78504 2.32553  6.90117   12163 dnaK 
  17423   17446 -23  1 4.66174 7.60767 1.42829 10.85012   17489 nhaA 
  28309   28332 -23  1 1.24002 4.51863 1.42829  4.33936   28374 dapB 
  29517   29540 -23  1 6.52602 3.68834 1.42829  8.79506   29651 carA 
  29586   29610 -24  1 5.70052 6.30282 2.41864  9.59369   29651 carA 
  42292   42314 -22  1 0.31701 5.10288 2.32553  3.10336   42367 fixA 
  70187   70210 -23  1 4.41517 1.76764 1.42829  4.76351   70387 araC 
  83770   83746 -24 -1 6.41220 0.73842 2.41864  4.74097   83708 leuL 
  85359   85381 -22  1 3.92959 5.95806 2.32553  7.57111   85540 ilvI 
  85382   85408 -26  1 0.36174 4.63297 3.69326  1.31044   85540 ilvI 
  85502   85526 -24  1 4.46725 5.95806 2.41864  8.01566   85540 ilvI 
  85564   85587 -23  1 5.34270 3.79803 1.42829  7.72143   87357 ilvH 
  89554   89578 -24  1 6.41220 6.49334 2.41864 10.49589   89634 yabB 
 104658  104682 -24  1 2.82480 5.33003 2.41864  5.74518  105305 ftsZ 
 105013  105036 -23  1 5.17868 2.43625 1.42829  6.19564  105305 ftsZ 
 122000  122023 -23  1 4.30135 3.75161 1.42829  6.63367  122092 pdhR 
 122936  122962 -26  1 2.35640 3.03865 3.69326  1.71078  123017 aceE 
 127683  127706 -23  1 5.55721 7.60767 1.42829 11.74559  127912 lpdA 
 131485  131508 -23  1 2.65139 5.95806 1.42829  7.19015  131615 acnB 
 156251  156227 -24 -1 4.35343 4.47807 2.41864  6.42185  156201 ecpD 
 156273  156247 -26 -1 3.45096 5.19103 3.69326  4.95772  156201 ecpD 
 186012  185991 -21 -1 6.41220 1.22472 3.28991  4.35600  185947 dapD 
 208377  208400 -23  1 5.22888 2.84880 1.42829  6.65839  208621 accA 
 218868  218847 -21 -1 6.41220 6.49334 3.28991  9.62463  218775 proS 
 223450  223472 -22  1 5.63055 8.37724 2.32553 11.69126  229167 yafB 
 223560  223582 -22  1 6.52602 6.30282 2.32553 10.51230  229167 yafB 
 235904  235926 -22  1 4.75509 7.60767 2.32553 10.04623  236067 dnaQ 
 236875  236899 -24  1 5.51603 2.71567 2.41864  5.82206  237335 CDS_237335-238120 
 259414  259392 -22 -1 0.35640 2.71312 2.32553  0.75299  259324 phoE 
 289599  289576 -23 -1 6.07485 5.10288 1.42829  9.75844  289529 argF 
 328619  328596 -23 -1 5.01043 4.47807 1.42829  8.06920  328558 betI 
 328611  328635 -24  1 3.40519 1.82714 2.41864  2.82269  328687 betT 
 354075  354097 -22  1 5.34270 6.56585 2.32553  9.59202  354146 codB 
 357962  357985 -23  1 4.11451 4.14667 1.42829  6.84188  358023 cynT 
 365602  365578 -24 -1 5.53674 4.56300 2.41864  7.69010  365529 lacZ 
 366799  366774 -25 -1 0.71395 3.56684 4.00360  0.28619  366734 lacI 
 384396  384419 -23  1 5.67103 3.48269 1.42829  7.73442  385431 CDS_385431-386198 
 405468  405490 -22  1 0.35474 5.87245 2.32553  3.91066  405629 aroL 
 411795  411771 -24 -1 1.86974 5.22109 2.41864  4.68118  411705 araJ 
 424175  424198 -23  1 5.17868 5.45152 1.42829  9.21091  424235 queA 
 431347  431326 -21 -1 0.83407 8.37724 3.28991  5.93040  431237 tsx 
 450911  450888 -23 -1 5.53674 7.60767 1.42829 11.72512  450834 cyoA 
 455765  455790 -25  1 1.65473 5.33003 4.00360  2.99015  455901 clpP 
 455832  455856 -24  1 0.22187 6.93782 2.41864  4.75005  455901 clpP 
 460521  460544 -23  1 6.05438 3.79343 1.42829  8.42852  460675 hupB 
 460585  460608 -23  1 5.53719 4.08990 1.42829  8.20779  460675 hupB 
 519205  519184 -21 -1 4.63215 7.07239 3.28991  8.42363  518989 tesA 
 552399  552377 -22 -1 5.29275 5.95806 2.32553  8.93427  552323 purE 
 563888  563912 -24  1 6.52602 0.13412 2.41864  4.25049  565195 CDS_565195-565755 
 611925  611901 -24 -1 5.70052 7.07239 2.41864 10.36326  611717 fepA 
 611876  611902 -26  1 6.07485 7.07239 3.69326  9.46297  612038 fes 
 623985  623962 -23 -1 6.18867 3.55182 1.42829  8.32119  623733 fepB 
 624019  624042 -23  1 6.41220 2.75161 1.42829  7.74451  624108 entC 
 638109  638132 -23  1 1.04737 3.01465 1.42829  2.64273  638168 ahpC 
 698480  698457 -23 -1 2.82480 2.31352 1.42829  3.71902  698400 asnB 
 699610  699587 -23 -1 4.33272 5.87245 1.42829  8.78588  699549 nagD 
 702879  702858 -21 -1 3.07268 5.05647 3.28991  4.84824  702834 nagB 
 702983  702960 -23 -1 0.66471 2.20599 1.42829  1.45141  702834 nagB 
 703040  703065 -25  1 2.78567 2.38850 4.00360  1.17957  703167 nagE 
 709973  709951 -22 -1 5.31321 8.37724 2.32553 11.37392  709869 fur 
 728109  728083 -26 -1 4.24703 3.78167 3.69326  4.34443  727955 kdpA 
 753918  753897 -21 -1 0.93041 4.59703 3.28991  2.24653  753691 gltA 
 754022  753998 -24 -1 2.29357 2.53183 2.41864  2.41576  753691 gltA 
 754144  754167 -23  1 5.53719 7.26291 1.42829 11.38081  754400 sdhC 
 754590  754616 -26  1 0.71955 6.33542 3.69326  3.37071  754783 sdhD 
 757774  757795 -21  1 5.55721 1.38744 3.28991  3.66373  757929 sucA 
 765184  765160 -24 -1 6.43266 7.07239 2.41864 11.09541  765098 farR 
 770359  770382 -23  1 4.32182 5.72632 1.42829  8.62884  770678 cydA 
 770475  770498 -23  1 4.82506 6.30282 1.42829  9.70858  770678 cydA 
 784781  784804 -23  1 5.53674 4.68450 1.42829  8.80194  784856 aroG 
 808546  808525 -21 -1 3.92959 5.45152 3.28991  6.10020  808480 bioA 
 808489  808512 -23  1 5.53719 2.75161 1.42829  6.86951  808567 bioB 
 812340  812364 -24  1 2.19723 4.06106 2.41864  3.84864  812749 uvrB 
 812653  812674 -21  1 1.91491 8.37724 3.28991  7.01124  812749 uvrB 
 847305  847280 -25 -1 6.07485 1.42005 4.00360  3.50029  847227 glnH 
 847453  847430 -23 -1 3.92959 4.59703 1.42829  7.10732  847227 glnH 
 921934  921912 -22 -1 5.51603 5.72632 2.32553  8.92582  921813 cspD 
 922267  922293 -26  1 5.51603 6.44436 3.69326  8.27612  922487 clpA 
 925265  925242 -23 -1 4.98996 5.87245 1.42829  9.44312  921813 cspD 
 931517  931542 -25  1 6.41220 1.78564 4.00360  4.20322  931818 lrp 
 940015  940040 -25  1 2.55504 3.75161 4.00360  2.31204  940269 dmsA 
 953180  953156 -24 -1 3.96400 2.38348 2.41864  3.93784  952777 pflB 
 953748  953726 -22 -1 2.93120 5.26100 2.32553  5.87566  953689 focA 
 954071  954049 -22 -1 0.13634 6.49589 2.32553  4.31569  953689 focA 
 956785  956808 -23  1 2.49117 4.59703 1.42829  5.66890  956876 serC 
 960351  960375 -24  1 1.75522 8.37724 2.41864  7.72282  960424 cmk 
 961050  961074 -24  1 3.18261 6.93782 2.41864  7.71079  961218 rpsA 
 962939  962962 -23  1 6.41220 1.41918 1.42829  6.41208  963051 himD 
 985000  984978 -22 -1 4.43564 3.78167 2.32553  5.90077  984932 aspC 
 986349  986326 -23 -1 0.13619 1.89457 1.42829  0.61146  986205 ompF 
 989670  989648 -22 -1 1.20071 7.26291 2.32553  6.14708  989579 pncB 
 996818  996796 -22 -1 4.43564 2.57401 2.32553  4.69311  996735 CDS_996735-996160 
1010849 1010872 -23  1 3.44636 4.56046 1.42829  6.58752 1011224 pqiA 
1015754 1015731 -23 -1 3.26899 5.22109 1.42829  7.07079 1015693 fabA 
1019443 1019421 -22 -1 5.53719 5.45152 2.32553  8.67218 1019276 ompA 
1020199 1020178 -21 -1 3.79506 0.76912 3.28991  1.28327 1020142 sulA 
1036897 1036919 -22  1 4.30323 4.89600 2.32553  6.88270 1036963 appC 
1039787 1039809 -22  1 2.07782 3.79803 2.32553  3.55931 1039840 appA 
1063089 1063067 -22 -1 4.07782 3.78167 2.32553  5.54296 1062998 cbpA 
1078180 1078157 -23 -1 4.65262 2.44003 1.42829  5.67335 1078105 putA 
1078400 1078423 -23  1 3.70937 1.75545 1.42829  4.04553 1078528 putP 
1078479 1078504 -25  1 0.02413 4.32139 4.00360  0.35091 1078528 putP 
1103048 1103070 -22  1 0.93041 4.38540 2.32553  2.99927 1103174 csgB 
1108465 1108489 -24  1 4.62056 7.60767 2.41864  9.81859 1108558 mdoG 
1145838 1145861 -23  1 0.25000 6.49334 1.42829  5.32405 1146017 yceD 
1145980 1146003 -23  1 6.52602 6.30282 1.42829 11.40954 1146017 yceD 
1165176 1165202 -26  1 3.54017 5.95806 3.69326  5.81396 1165308 ndh 
1194150 1194173 -23  1 4.64127 4.19487 1.42829  7.41685 1194346 icdA 
1194197 1194220 -23  1 5.31321 5.26100 1.42829  9.15492 1194346 icdA 
1229929 1229952 -23  1 4.16446 3.12818 1.42829  5.87334 1229990 umuD 
1236714 1236740 -26  1 6.54648 2.79727 3.69326  5.65949 1236794 dadA 
1246679 1246656 -23 -1 2.08316 3.17000 1.42829  3.83386 1246599 treA 
1261435 1261411 -24 -1 4.69053 6.56585 2.41864  8.84674 1261098 prsA 
1262772 1262795 -23  1 0.25000 4.56300 1.42829  3.39371 1262937 hemA 
1262864 1262887 -23  1 4.77556 6.44436 1.42829  9.80062 1262937 hemA 
1267042 1267068 -26  1 4.77556 5.56585 3.69326  6.65714 1267388 kdsA 
1292215 1292192 -23 -1 4.65262 7.07239 1.42829 10.30571 1292145 hns 
1297673 1297647 -26 -1 2.13336 6.93782 3.69326  5.38692 1297344 adhE 
1298660 1298683 -23  1 4.33272 7.07239 1.42829  9.98581 1299206 oppA 
1309046 1309070 -24  1 6.54648 7.60767 2.41864 11.74451 1309113 tonB 
1321167 1321144 -23 -1 6.41220 2.59417 1.42829  7.58707 1321106 trpL 
1328810 1328832 -22  1 4.36085 4.43303 2.32553  6.47734 1329072 topA 
1328876 1328899 -23  1 0.27605 1.58510 1.42829  0.44186 1329072 topA 
1331779 1331801 -22  1 2.58038 7.07239 2.32553  7.33624 1331879 cysB 
1337293 1337269 -24 -1 6.41220 1.22472 2.41864  5.22727 1337184 ribA 
1339859 1339882 -23  1 2.55089 6.56585 1.42829  7.69745 1339945 pyrF 
1341428 1341406 -22 -1 3.77716 7.07239 2.32553  8.53302 1341352 osmB 
1347000 1346977 -23 -1 5.15822 3.32033 1.42829  7.05925 1346936 rnb 
1347187 1347163 -24 -1 3.18261 6.93782 2.41864  7.71079 1346936 rnb 
1386903 1386879 -24 -1 4.33272 6.49334 2.41864  8.41642 1386835 tpx 
1397610 1397587 -23 -1 1.58189 7.60767 1.42829  7.77027 1397550 fnr 
1451857 1451881 -24  1 3.70937 3.68450 2.41864  4.98423 1451951 CDS_1451951-1452880 
1486180 1486204 -24  1 1.18724 1.82714 2.41864  0.60474 1486256 aldA 
1496734 1496756 -22  1 3.18190 6.49334 2.32553  7.35871 1496962 rimL 
1554588 1554610 -22  1 1.18190 4.14667 2.32553  3.01204 1554649 osmC 
1617082 1617105 -23  1 6.52602 7.07239 1.42829 12.17911 1617201 marR 
1666648 1666623 -25 -1 5.53650 3.01654 4.00360  4.55843 1666588 mlc 
1676035 1676010 -25 -1 4.69123 5.56585 4.00360  6.26247 1675927 pntA 
1686498 1686477 -21 -1 4.69123 4.56760 3.28991  5.97791 1686401 fumA 
1697287 1697265 -22 -1 1.54506 3.30140 2.32553  2.52992 1697204 malI 
1697252 1697273 -21  1 4.77556 7.07239 3.28991  8.56704 1697379 malX 
1733317 1733338 -21  1 5.63055 3.78167 3.28991  6.13131 1733402 sodB 
1739191 1739214 -23  1 5.65101 7.26291 1.42829 11.49463 1739437 cfa 
1744405 1744428 -23  1 6.05438 6.30282 1.42829 10.93791 1744724 CDS_1744724-1745029 
1753457 1753481 -24  1 5.29275 8.37724 2.41864 11.26035 1753722 pykF 
1755370 1755393 -23  1 0.64425 1.41918 1.42829  0.64413 1755445 lpp 
1785219 1785196 -23 -1 3.92959 1.89457 1.42829  4.40486 1785136 ppsA 
1793778 1793755 -23 -1 2.25000 6.49334 1.42829  7.32405 1793576 himA 
1797360 1797337 -23 -1 6.52602 3.03865 1.42829  8.14537 1797294 pheM 
1797820 1797798 -22 -1 1.75522 6.56585 2.32553  6.00454 1797773 rplT 
1799404 1799381 -23 -1 1.75522 6.44436 1.42829  6.78028 1798662 infC 
1804342 1804365 -23  1 1.18024 2.57401 1.42829  2.33495 1804394 pfkB 
1820341 1820318 -23 -1 6.43266 0.64112 1.42829  5.65449 1820280 osmE 
1830071 1830050 -21 -1 0.14398 7.07239 3.28991  3.93546 1830006 CDS_1830006-1828786 
1840294 1840319 -25  1 5.34270 5.87245 4.00360  7.22055 1840395 gdhA 
1860588 1860609 -21  1 0.83407 7.60767 3.28991  5.16083 1860795 gapA 
1860725 1860747 -22  1 5.51603 4.42146 2.32553  7.62096 1860795 gapA 
1910675 1910653 -22 -1 6.43266 5.00494 2.32553  9.12106 1910600 htpX 
1930856 1930835 -21 -1 2.17192 1.57401 3.28991  0.46501 1930780 eda 
1932771 1932747 -24 -1 0.68164 5.82349 2.41864  4.09548 1932628 edd 
1934433 1934410 -23 -1 3.74511 4.43303 1.42829  6.75884 1934338 zwf 
1976432 1976410 -22 -1 0.33037 3.82746 2.32553  1.84129 1976230 flhD 
1976453 1976430 -23 -1 5.65101 4.43303 1.42829  8.66475 1976230 flhD 
1987631 1987654 -23  1 5.51603 4.45152 1.42829  8.54826 1987704 tyrP 
1990907 1990884 -23 -1 6.43266 2.68834 1.42829  7.70170 1990840 pgsA 
1992934 1992911 -23 -1 5.63055 5.33003 1.42829  9.54128 1992663 uvrC 
1993461 1993437 -24 -1 5.19939 6.30282 2.41864  9.09257 1993382 uvrY 
1999874 1999853 -21 -1 2.46169 4.32139 3.28991  3.50216 1999812 fliA 
2021824 2021848 -24  1 5.65056 3.29217 2.41864  6.53309 2021990 rcsA 
2042525 2042549 -24  1 6.41220 2.71567 2.41864  6.71822 2042885 CDS_2042885-2050036 
2053021 2053042 -21  1 4.80505 5.63297 3.28991  7.15710 2053083 amn 
2058996 2058972 -24 -1 4.69123 3.15760 2.41864  5.43919 2058936 cbl 
2060236 2060262 -26  1 6.41220 0.25418 3.69326  2.98211 2066630 CDS_2066630-2067049 
2087797 2087773 -24 -1 2.57551 3.45791 2.41864  3.62377 2087762 yefM 
2091351 2091374 -23  1 5.55721 4.19487 1.42829  8.33278 2091487 hisB 
2099381 2099358 -23 -1 4.71124 7.26291 1.42829 10.55486 2099290 gnd 
2135640 2135618 -22 -1 6.16821 1.27851 2.32553  5.13018 2135265 CDS_2135265-2134126 
2229806 2229827 -21  1 1.44636 6.49334 3.28991  4.65879 2229864 cdd 
2244985 2244962 -23 -1 5.58670 3.83063 1.42829  7.99803 2244789 cirA 
2253305 2253283 -22 -1 2.30715 5.67479 2.32553  5.66541 2253206 yeiK 
2284190 2284215 -25  1 6.07485 1.99655 4.00360  4.07679 2286925 CDS_2286925-2287047 
2308481 2308459 -22 -1 2.91961 0.53219 2.32553  1.13526 2308425 ada 
2310881 2310859 -22 -1 3.58967 2.51000 2.32553  3.78314 2310769 ompC 
2337514 2337489 -25 -1 4.11451 8.37724 4.00360  8.49715 2337440 gyrA 
2337526 2337548 -22  1 4.82506 7.26291 2.32553  9.77144 2337587 ubiG 
2342744 2342767 -23  1 6.07485 4.45407 1.42829  9.10962 2342885 nrdA 
2350503 2350482 -21 -1 5.67103 5.56585 3.28991  7.95597 2350394 glpT 
2350572 2350593 -21  1 3.77716 2.24697 3.28991  2.74322 2350667 glpA 
2432071 2432046 -25 -1 1.06808 4.47807 4.00360  1.55155 2431946 accD 
2435936 2435914 -22 -1 3.07268 2.94597 2.32553  3.70212 2435871 pdxB 
2439695 2439672 -23 -1 3.26899 4.56760 1.42829  6.41729 2439625 fabB 
2459189 2459214 -25  1 6.07485 7.26291 4.00360  9.34315 2459320 fadL 
2475806 2475832 -26  1 5.51673 3.42530 3.69326  5.25776 2475867 dsdX 
2518784 2518762 -22 -1 3.70868 6.56585 2.32553  7.95800 2518692 gltX 
2518829 2518806 -23 -1 5.51673 3.17000 1.42829  7.26743 2518692 gltX 
2520559 2520538 -21 -1 1.59853 4.32139 3.28991  2.63901 2520497 xapR 
2520618 2520595 -23 -1 2.00366 7.07239 1.42829  7.65676 2520497 xapR 
2530328 2530352 -24  1 3.75670 1.43897 2.41864  2.78602 2530429 cysK 
2530359 2530385 -26  1 1.58189 5.33003 3.69326  3.22765 2530429 cysK 
2531485 2531510 -25  1 5.70052 0.19072 4.00360  1.89663 2531784 ptsH 
2531586 2531609 -23  1 1.15815 5.49973 1.42829  5.23858 2531784 ptsH 
2533468 2533490 -22  1 3.06784 6.44436 2.32553  7.19566 2533854 crr 
2541615 2541590 -25 -1 0.04584 6.44436 4.00360  2.49559 2541548 cysP 
2595838 2595812 -26 -1 4.43564 6.44436 3.69326  7.19573 2595638 purC 
2597839 2597815 -24 -1 5.34270 4.89600 2.41864  7.82906 2597780 dapA 
2597864 2597887 -23  1 5.65101 1.32192 1.42829  5.55363 2598498 bcp 
2598422 2598445 -23  1 3.42590 2.38348 1.42829  4.39008 2598498 bcp 
2618961 2618939 -22 -1 5.15822 8.37724 2.32553 11.21893 2618919 upp 
2632161 2632138 -23 -1 0.57969 8.37724 1.42829  7.53763 2632090 guaB 
2632184 2632206 -22  1 5.22888 5.63297 2.32553  8.54532 2632252 xseA 
2663388 2663410 -22  1 0.82243 3.61583 2.32553  2.12172 2663434 csiE 
2683625 2683603 -22 -1 2.66471 7.26291 2.32553  7.61109 2683527 glyA 
2683782 2683806 -24  1 5.53674 5.67479 2.41864  8.80189 2683855 hmpA 
2685495 2685472 -23 -1 1.34011 3.12358 1.42829  3.04440 2685428 glnB 
2693644 2693621 -23 -1 3.48540 8.37724 1.42829 10.44334 2693563 purL 
2705248 2705227 -21 -1 4.64103 1.73379 3.28991  3.09391 2705144 lepA 
2729503 2729481 -22 -1 5.51673 8.37724 2.32553 11.57744 2723766 kgtP 
2732258 2732234 -24 -1 6.54648 4.47807 2.41864  8.61491 2732193 clpB 
2735565 2735589 -24  1 6.41220 3.12818 2.41864  7.13073 2735619 pheL 
2739254 2739232 -22 -1 6.43266 3.83063 2.32553  7.94676 2739170 aroF 
2748801 2748779 -22 -1 6.43266 5.49973 2.32553  9.61585 2748729 grpE 
2796593 2796570 -23 -1 4.32182 5.82349 1.42829  8.72601 2796516 stpA 
2796613 2796587 -26 -1 3.44636 8.37724 3.69326  8.13934 2796516 stpA 
2802742 2802764 -22  1 6.16821 2.12818 2.32553  5.97985 2802836 proV 
2808733 2808756 -23  1 5.65056 5.63297 1.42829  9.86424 2808791 emrR 
2820147 2820123 -24 -1 4.11451 4.45407 2.41864  6.15893 2820033 alaS 
2821874 2821852 -22 -1 5.58670 8.37724 2.32553 11.64740 2821792 recA 
2823783 2823804 -21  1 4.66174 4.68450 3.28991  6.06532 2823855 srlA_1 
2866174 2866151 -23 -1 4.36085 5.95806 1.42829  8.89961 2865574 rpoS 
2866842 2866817 -25 -1 2.53043 3.29217 4.00360  1.82799 2866776 nlpD 
2866887 2866863 -24 -1 2.58038 3.83063 2.41864  4.00137 2866776 nlpD 
2874428 2874404 -24 -1 5.31321 5.87245 2.41864  8.77602 2874352 cysD 
2890021 2889997 -24 -1 5.67103 4.45152 2.41864  7.71290 2889921 cysJ 
2907771 2907748 -23 -1 2.81321 7.26291 1.42829  8.65682 2907688 pyrG 
2911886 2911862 -24 -1 2.89958 5.22109 2.41864  5.71103 2911673 relA 
2932109 2932130 -21  1 2.44122 3.55182 3.28991  2.71213 2932257 fucP 
2940695 2940672 -23 -1 2.53018 8.37724 1.42829  9.48813 2940589 gcvA 
2957066 2957043 -23 -1 2.82480 6.44436 1.42829  7.84986 2956906 ptr 
2974557 2974579 -22  1 5.01043 1.27851 2.32553  3.97240 2974621 galR 
3048828 3048805 -23 -1 2.58038 3.79343 1.42829  4.95452 3048687 gcvT 
3071878 3071854 -24 -1 2.19723 5.22109 2.41864  5.00867 3071711 epd 
3088262 3088283 -21  1 4.24703 1.25958 3.28991  2.22570 3088366 endA 
3088310 3088333 -23  1 6.18867 3.12358 1.42829  7.89295 3088366 endA 
3098803 3098782 -21 -1 0.12352 4.32139 3.28991  1.16400 3098747 ansB 
3098847 3098821 -26 -1 0.05362 5.72632 3.69326  2.09567 3098747 ansB 
3108345 3108368 -23  1 5.51603 4.47807 1.42829  8.57481 3126287 glcC 
3126185 3126207 -22  1 2.76521 5.56585 2.32553  6.01452 3126287 glcC 
3208242 3208219 -23 -1 5.53674 5.82349 1.42829  9.94094 3208184 ygjD 
3208249 3208275 -26  1 1.63426 7.26291 3.69326  5.21291 3208422 rpsU 
3208341 3208365 -24  1 5.17868 0.64960 2.41864  3.41865 3208422 rpsU 
3210241 3210267 -26  1 0.18273 3.83063 3.69326  0.32909 3210688 rpoD 
3210295 3210320 -25  1 6.43266 1.58510 4.00360  4.02316 3210688 rpoD 
3213201 3213224 -23  1 3.58967 8.37724 1.42829 10.54762 3214420 CDS_3214420-3215043 
3264768 3264746 -22 -1 1.18190 5.82349 2.32553  4.68886 3264706 tdcA 
3303536 3303513 -23 -1 2.35640 4.43303 1.42829  5.37014 3303458 mtr 
3309461 3309438 -23 -1 4.24703 6.56585 1.42829  9.39359 3309325 rpsO 
3315973 3315950 -23 -1 6.18867 6.56585 1.42829 11.33523 3315653 yhbC 
3316051 3316027 -24 -1 6.41220 8.37724 2.41864 12.37980 3315653 yhbC 
3352112 3352135 -23  1 4.98996 3.79343 1.42829  7.36410 3352267 gltB 
3381983 3381960 -23 -1 5.53719 3.17000 1.42829  7.28789 3381903 mdh 
3382205 3382226 -21  1 2.93120 7.60767 3.28991  7.25796 3382338 argR 
3382278 3382304 -26  1 6.18867 4.59703 3.69326  7.10143 3382338 argR 
3402742 3402765 -23  1 5.70052 2.38348 1.42829  6.66470 3403073 accB 
3407850 3407873 -23  1 5.31321 6.30282 1.42829 10.19674 3407917 yhdG 
3426610 3426588 -22 -1 6.52602 6.30282 2.32553 10.51230 3411102 envR 
3426719 3426697 -22 -1 2.28714 8.37724 2.32553  8.34785 3411102 envR 
3451111 3451089 -22 -1 4.36085 8.37724 2.32553 10.42156 3450907 rpsJ 
3472291 3472268 -23 -1 6.41220 7.60767 1.42829 12.60058 3472189 rpsL 
3487894 3487869 -25 -1 6.05438 5.19103 4.00360  7.25081 3487817 argD 
3488525 3488499 -26 -1 3.42635 7.60767 3.69326  7.34975 3488466 pabA 
3490006 3489983 -23 -1 4.05736 6.56585 1.42829  9.20392 3489934 ppiA 
3490119 3490098 -21 -1 1.81875 5.72632 3.28991  4.26415 3489934 ppiA 
3513926 3513902 -24 -1 6.43266 5.82349 2.41864  9.84651 3513551 dam 
3515271 3515248 -23 -1 3.84321 7.07239 1.42829  9.49630 3514944 damX 
3516840 3516816 -24 -1 6.05438 4.32139 2.41864  7.96613 3516124 aroB 
3517053 3517030 -23 -1 5.51603 1.86198 1.42829  5.95872 3516903 aroK 
3534359 3534335 -24 -1 5.65101 5.33003 2.41864  8.57139 3534222 ompR 
3534429 3534406 -23 -1 0.80876 4.08990 1.42829  3.47936 3534222 ompR 
3544006 3544030 -24  1 0.17095 6.33542 2.41864  4.09673 3544195 gntT 
3550180 3550154 -26 -1 0.61316 3.61583 3.69326  0.54471 3550106 malP 
3555774 3555749 -25 -1 5.67103 3.29217 4.00360  4.96859 3555711 yhgL 
3559569 3559592 -23  1 2.40739 6.30282 1.42829  7.29092 3559646 glpD 
3575309 3575286 -23 -1 5.34270 2.88197 1.42829  6.80538 3575185 gntK 
3595395 3595370 -25 -1 4.75509 3.68834 4.00360  4.44882 3595191 livK 
3595417 3595395 -22 -1 4.77556 2.05888 2.32553  4.51790 3595191 livK 
3597426 3597403 -23 -1 2.08341 4.56300 1.42829  5.22712 3597346 livJ 
3598672 3598646 -26 -1 4.64058 7.26291 3.69326  8.21922 3598414 rpoH 
3604016 3604042 -26  1 6.52602 5.22109 3.69326  8.06284 3604082 CDS_3604082-3606280 
3637580 3637601 -21  1 5.51603 3.30140 3.28991  5.53652 3637741 uspA 
3646106 3646129 -23  1 6.52602 1.76764 1.42829  6.87436 3646158 arsR 
3651533 3651555 -22  1 3.33714 7.07239 2.32553  8.09299 3651558 slp 
3654455 3654432 -23 -1 3.31668 4.08990 1.42829  5.98728 3654370 hdeA 
3705534 3705511 -23 -1 5.51603 1.80698 1.42829  5.90372 3705334 dppA 
3717483 3717506 -23  1 6.18867 1.60055 1.42829  6.36993 3717678 cspA 
3735067 3735088 -21  1 2.94774 3.61583 3.28991  3.28265 3735126 malS 
3740267 3740290 -23  1 6.16821 6.49589 1.42829 11.24480 3740362 CDS_3740362-3741360 
3769781 3769804 -23  1 4.30135 1.80698 1.42829  4.68904 3769908 mtlA 
3780343 3780320 -23 -1 3.35087 1.64652 1.42829  3.57809 3780189 cysE 
3844859 3844836 -23 -1 0.96184 6.93782 1.42829  6.48036 3844794 uhpT 
3865178 3865156 -22 -1 6.43266 2.31352 2.32553  6.42964 3865049 hslT 
3879948 3879927 -21 -1 3.33714 0.46818 3.28991  0.52441 3878849 recF 
3880222 3880198 -24 -1 1.20771 1.86198 2.41864  0.66004 3879949 dnaN 
3880252 3880226 -26 -1 5.17868 3.42530 3.69326  4.91972 3879949 dnaN 
3880395 3880371 -24 -1 2.25000 5.00494 2.41864  4.84530 3879949 dnaN 
3881710 3881732 -22  1 2.82480 8.37724 2.32553  8.88551 3881965 rpmH 
3881835 3881858 -23  1 6.52602 6.93782 1.42829 12.04454 3881965 rpmH 
3909230 3909208 -22 -1 0.02413 5.19103 2.32553  2.89863 3909153 pstS 
3912881 3912860 -21 -1 3.92959 5.72632 3.28991  6.37500 3912828 glmU 
3920186 3920164 -22 -1 6.43266 8.37724 2.32553 12.49337 3920080 atpI 
3924691 3924669 -22 -1 5.70052 7.60767 2.32553 10.99165 3924631 asnC 
3924724 3924748 -24  1 6.18867 1.60055 2.41864  5.37958 3924783 asnA 
3930912 3930936 -24  1 2.69420 6.49334 2.41864  6.77790 3930941 rbsD 
3939104 3939126 -22  1 5.51673 8.37724 2.32553 11.57744 3945709 yifE 
3939223 3939245 -22  1 6.52602 7.07239 2.32553 11.28187 3945709 yifE 
3947806 3947830 -24  1 4.77556 6.49589 2.41864  8.86180 3947945 ilvL 
3947878 3947902 -24  1 3.53972 0.73842 2.41864  1.86849 3947945 ilvL 
3949976 3950000 -24  1 6.05438 3.12818 2.41864  6.77292 3950107 ilvE 
3955519 3955496 -23 -1 1.22629 6.49589 1.42829  6.30289 3955441 ilvY 
3963228 3963254 -26  1 2.78567 6.56585 3.69326  5.66726 3963322 trxA 
3963743 3963766 -23  1 3.40519 3.68450 1.42829  5.67039 3963846 rhoL 
3988578 3988601 -23  1 4.64058 5.72632 1.42829  8.94760 3988766 cyaA 
3995488 3995509 -21  1 4.07782 8.37724 3.28991  9.17416 3995596 uvrD 
3998770 3998793 -23  1 5.51603 5.56585 1.42829  9.66259 3999038 corA 
4028638 4028615 -23 -1 6.18867 2.94597 1.42829  7.71535 4028561 fadB 
4032793 4032815 -22  1 5.51673 8.37724 2.32553 11.57744 4039649 yihD 
4040923 4040946 -23  1 4.77556 1.86198 1.42829  5.21824 4040999 dsbA 
4047444 4047467 -23  1 3.45726 5.10288 1.42829  7.14085 4048927 yihI 
4049489 4049512 -23  1 2.66471 6.49334 1.42829  7.73876 4049619 hemN 
4055721 4055696 -25 -1 5.55721 1.28931 4.00360  2.85191 4055614 glnA 
4055835 4055811 -24 -1 4.65262 0.99683 2.41864  3.23980 4055614 glnA 
4095258 4095281 -23  1 0.33082 5.63297 1.42829  4.54450 4095317 rhaS 
4098308 4098329 -21  1 5.19939 8.37724 3.28991 10.29573 4098391 sodA 
4107452 4107475 -23  1 4.77556 3.78167 1.42829  7.13793 4107510 cdh 
4115776 4115752 -24 -1 2.93120 3.79343 2.41864  4.31498 4115670 glpF 
4118023 4117999 -24 -1 2.44097 8.37724 2.41864  8.40857 4117929 menA 
4126080 4126057 -23 -1 2.42121 6.49334 1.42829  7.49525 4125975 metJ 
4126144 4126121 -23 -1 3.18261 7.60767 1.42829  9.37099 4125975 metJ 
4126172 4126148 -24 -1 4.30135 4.68450 2.41864  6.57620 4125975 metJ 
4126181 4126204 -23  1 5.51603 4.51863 1.42829  8.61537 4126252 metB 
4130089 4130112 -23  1 3.74511 1.32192 1.42829  3.64773 4130196 metF 
4131356 4131380 -24  1 1.77638 3.83063 2.41864  3.19737 4131415 katG 
4150801 4150778 -23 -1 5.51603 0.29570 1.42829  4.39244 4150677 ppc 
4152430 4152451 -21  1 6.41220 5.26100 3.28991  8.39228 4152580 argC 
4152509 4152486 -23 -1 4.77556 5.19103 1.42829  8.54730 4152426 argE 
4152689 4152665 -24 -1 2.82480 4.56300 2.41864  4.97816 4152426 argE 
4156000 4156024 -24  1 5.58670 5.95806 2.41864  9.13511 4156069 oxyR 
4160907 4160885 -22 -1 4.30135 6.93782 2.32553  8.92264 4160849 trmA 
4160943 4160967 -24  1 4.30135 4.52403 2.41864  6.41574 4161218 btuB 
4172925 4172948 -23  1 6.18867 6.56585 1.42829 11.33523 4173523 tufB 
4174722 4174746 -24  1 5.51603 3.45791 2.41864  6.56430 4174937 secE 
4175900 4175923 -23  1 4.65262 6.93782 1.42829 10.17114 4176025 rplK 
4177167 4177190 -23  1 4.64058 6.93782 1.42829 10.15911 4177574 rplJ 
4178608 4178629 -21  1 6.52602 1.54981 3.28991  4.79491 4178823 rpoB 
4205406 4205428 -22  1 3.35087 8.37724 2.32553  9.41157 4210813 yjaA 
4212949 4212971 -22  1 5.70052 4.14667 2.32553  7.53065 4213057 aceB 
4221331 4221356 -25  1 4.11451 3.93957 4.00360  4.05947 4221407 metH 
4231152 4231130 -22 -1 6.41220 2.59671 2.32553  6.69238 4230812 lysC 
4244077 4244055 -22 -1 4.32182 2.43749 2.32553  4.44277 4243998 malE 
4244282 4244304 -22  1 4.66104 2.99494 2.32553  5.33944 4244363 malK 
4254632 4254655 -23  1 0.72908 7.26291 1.42829  6.57269 4254694 lexA 
4271544 4271522 -22 -1 2.21769 5.49973 2.32553  5.40088 4271450 uvrA 
4271628 4271652 -24  1 1.42635 6.93782 2.41864  5.95453 4271704 ssb 
4275039 4275014 -25 -1 4.11451 7.26291 4.00360  7.38281 4274962 soxS 
4322818 4322795 -23 -1 1.65473 0.05041 1.42829  0.28585 4322743 phnC 
4327864 4327887 -23  1 4.16446 2.12818 1.42829  4.87334 4328080 proP 
4338167 4338144 -23 -1 5.53674 3.20706 1.42829  7.32451 4338102 adi 
4339261 4339239 -22 -1 0.10685 5.49973 2.32553  3.29004 4339206 melR 
4352413 4352389 -24 -1 0.33082 6.49334 2.41864  4.41452 4352295 lysU 
4357722 4357696 -26 -1 2.83322 5.18849 3.69326  4.33744 4357609 cadB 
4359572 4359549 -23 -1 3.42635 6.33542 1.42829  8.34248 4359512 cadC 
4360242 4360219 -23 -1 5.51603 4.47807 1.42829  8.57481 4359512 cadC 
4366047 4366021 -26 -1 1.54506 6.44436 3.69326  4.30515 4365950 aspA 
4368159 4368185 -26  1 5.53650 0.61946 3.69326  2.47169 4368266 mopB 
4376615 4376593 -22 -1 5.51673 6.93782 2.32553 10.13802 4376522 ampC 
4380027 4380004 -23 -1 4.30323 3.12818 1.42829  6.01211 4379896 frdA 
4396592 4396618 -26  1 5.53674 3.51864 3.69326  5.37111 4396830 miaA 
4397345 4397367 -22  1 3.42565 3.32033 2.32553  4.42944 4397866 hfq 
4397763 4397787 -24  1 0.17630 6.93782 2.41864  4.70447 4397866 hfq 
4402208 4402230 -22  1 2.02413 6.56585 2.32553  6.27345 4402265 purA 
4411793 4411816 -23  1 3.20237 4.38540 1.42829  6.16847 4411838 aidB 
4434240 4434219 -21 -1 5.19939 3.08054 3.28991  4.99902 4434143 cpdB 
4445946 4445969 -23  1 4.07782 3.32033 1.42829  5.97885 4446018 chpS 
4453300 4453324 -24  1 2.93120 7.60767 2.41864  8.12922 4453359 yjfG 
4463818 4463797 -21 -1 3.81577 6.49589 3.28991  7.03075 4463754 treB 
4464881 4464859 -22 -1 4.33272 3.51864 2.32553  5.53482 4464820 treR 
4470159 4470137 -22 -1 2.82480 8.37724 2.32553  8.88551 4470107 pyrL 
4475942 4475919 -23 -1 6.07485 5.72632 1.42829 10.38187 4475874 argI 
4493917 4493941 -24  1 6.18867 0.90114 2.41864  4.68016 4494318 intB 
4515887 4515862 -25 -1 4.32182 2.66414 4.00360  2.99135 4515803 fecI 
4538343 4538366 -23  1 5.65101 0.49001 1.42829  4.72173 4538525 fimB 
4539406 4539429 -23  1 4.69123 3.55182 1.42829  6.82375 4539605 fimE 
4549055 4549076 -21  1 6.41220 2.27851 3.28991  5.40979 4549205 uxuA 
4614211 4614237 -26  1 0.27605 6.56585 3.69326  3.15764 4614892 deoC 
4622401 4622378 -23 -1 5.34270 2.84880 1.42829  6.77221 4622358 smp 
4633012 4633034 -22  1 4.60484 4.56300 2.32553  6.85131 4633090 creA 
4638112 4638089 -23 -1 2.66471 4.63297 1.42829  5.87838 4637875 arcA 
4638141 4638117 -24 -1 4.77556 3.40970 2.41864  5.77561 4637875 arcA 
4638198 4638176 -22 -1 5.31321 6.93782 2.32553  9.93450 4637875 arcA 
4638284 4638260 -24 -1 3.58967 6.44436 2.41864  7.62438 4637875 arcA 
4638405 4638384 -21 -1 5.65056 6.49334 3.28991  8.86299 4637875 arcA