Taxon	Scaffold	Gene1	Gene2	Consecutive	Sep	Code	Strand1	Strand2	GNScore	GNWithin	GNAll	GNMinus	CAI	CAI.Alm	CBI	COG	COGanno	COGfun	Annotation	nCAI	nCAI.Alm	nCBI	nCOG	nCOGanno	nCOGfun	nAnnotation	MI	HK	CAIdsqr	CAIdxdy	CAIlogpratio	CAIdxdyR	CAIdsqrR	COGsim	N1	N2	forward	forwardplus	sumBias	same	bbfGNScore	bbfGNMinus	bbfGNWithin	bbfGNAll	bbfHK	bbfMI	bbfCAIdxdyR	bbfCAIdsqrR	COGsimClass	cfCOG	pSame
13773	129	181994	181995	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.07232066	1.335192	2.921130	1.0080980	2419	Uncharacterized conserved protein	S	conserved hypothetical protein	1.442419	3.054999	1.0304610	-	-	-	paREP1	 5.285113e-02	 1	1.149767e-02	 1.042750e-03	-1.155778e-03	-9.842096e-03	7.507564e-01		 2	 1	FALSE	FALSE	  1	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.8555544	0.5187177	0.4596276	U	0.4686274	0.5573725
13773	129	181995	181996	1	  44	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.442419	3.054999	1.0304610	-	-	-	paREP1	1.377219	3.027830	1.0338433	2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	E	peptidase, putative	 2.630109e-02	 1	4.251110e-03	 6.656162e-04	 4.228767e-02	-7.006088e-03	3.845332e-01		 1	11	 TRUE	FALSE	  0	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.7172240	0.5194147	0.5154995	U	0.4686274	0.5573725
13773	129	181996	181997	1	 243	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.377219	3.027830	1.0338433	2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	E	peptidase, putative	1.564707	3.533702	1.1559862	4938	Uncharacterized conserved protein	S	conserved within P. aerophilum	 0.000000e+00	 0	3.515206e-02	-8.405023e-03	-5.890030e-02	-4.820189e-01	1.961719e+00		11	 0	 TRUE	FALSE	 -1	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4082009	0.4087037	U	0.4686274	0.6162291
13773	129	181997	181998	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.564707	3.533702	1.1559862	4938	Uncharacterized conserved protein	S	conserved within P. aerophilum	1.672620	3.548649	0.9656766	-	-	-	hypothetical protein	 0.000000e+00	 0	1.164519e-02	 2.506830e-02	 4.055232e-01	 7.555479e-01	2.622262e-02		 0	 0	FALSE	FALSE	  0	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7685196	0.6348800	U	0.4686274	0.6162291
13773	129	181998	181999	1	 173	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.672620	3.548649	0.9656766	-	-	-	hypothetical protein	1.536064	3.277354	1.1431629	-	-	-	hypothetical protein	 0.000000e+00	 0	1.864766e-02	 1.873157e-02	 1.336710e-01	 6.669614e-01	6.492132e-02		 0	 0	FALSE	FALSE	  1	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7426382	0.6191240	U	0.4686274	0.6162291
13773	129	181999	182000	1	  27	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.536064	3.277354	1.1431629	-	-	-	hypothetical protein	1.317406	2.858902	1.0053560	602	Organic radical activating enzymes	O	coenzyme PQQ synthesis protein, conjectural	 0.000000e+00	 0	4.781143e-02	-1.134484e-02	-8.452485e-02	-6.304743e-01	2.562948e+00		 0	27	 TRUE	FALSE	  0	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3914780	0.4029661	U	0.4686274	0.6162291
13773	129	182000	182001	1	   1	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.317406	2.858902	1.0053560	602	Organic radical activating enzymes	O	coenzyme PQQ synthesis protein, conjectural	1.511417	3.219537	1.0516370	-	-	-	conserved hypothetical protein	 1.054642e-03	 2	3.764022e-02	-8.042404e-03	-1.097376e-01	-5.162830e-01	2.173531e+00		27	 2	 TRUE	FALSE	 -1	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6838149	0.4709759	0.4034779	0.4062445	U	0.4686274	0.5573725
13773	129	182001	182002	1	 173	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511417	3.219537	1.0516370	-	-	-	conserved hypothetical protein	1.429631	3.236087	1.1069659	1695	Predicted transcriptional regulators	K	conserved hypothetical protein	 7.508473e-04	 2	6.688830e-03	-1.306211e-03	-2.481713e-03	-6.898420e-02	4.802713e-01		 2	 2	 TRUE	FALSE	 -2	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4618072	0.5014305	0.4966064	U	0.4686274	0.6162291
13773	129	182002	182003	1	 216	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.429631	3.236087	1.1069659	1695	Predicted transcriptional regulators	K	conserved hypothetical protein	1.473642	3.148229	1.0704629	-	-	-	hypothetical protein	 0.000000e+00	 0	1.936975e-03	-4.841842e-04	 1.513100e-02	-3.652649e-02	1.794690e-01		 2	 0	 TRUE	FALSE	 -3	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5102899	0.5852468	U	0.4686274	0.6162291
13773	129	182003	182004	1	 365	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.473642	3.148229	1.0704629	-	-	-	hypothetical protein	1.425040	3.500694	1.1367223	-	-	-	hypothetical protein	 0.000000e+00	 0	2.362142e-03	-5.863271e-04	 1.438859e-02	-5.234688e-02	2.264094e-01		 0	 0	 TRUE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5060667	0.5722463	U	0.4686274	0.6162291
13773	129	182004	182005	1	  60	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.425040	3.500694	1.1367223	-	-	-	hypothetical protein	1.514153	3.334057	1.1582241	-	-	-	hypothetical protein	 0.000000e+00	 0	7.941025e-03	-1.653877e-03	 9.639221e-03	-1.012481e-01	5.761078e-01		 0	 0	 TRUE	FALSE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4906905	0.4804678	U	0.4686274	0.6162291
13773	129	182005	182006	1	 147	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.514153	3.334057	1.1582241	-	-	-	hypothetical protein	1.383252	3.176541	1.0465540	4933	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.713510e-02	-4.276537e-03	-2.747599e-02	-3.280440e-01	1.312897e+00		 0	 2	 TRUE	FALSE	 -6	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4337780	0.4237791	U	0.4686274	0.6162291
13773	129	182006	182007	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.383252	3.176541	1.0465540	4933	Uncharacterized conserved protein	S	conserved hypothetical protein	1.397745	3.047043	1.0664146	2005	N-terminal domain of molybdenum-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	2.100493e-04	 3.655632e-03	 5.899788e-02	 2.477505e-01	1.360813e-02		 2	 0	FALSE	FALSE	 -5	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5684653	0.6412444	U	0.4686274	0.6162291
13773	129	182007	182008	1	  35	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.397745	3.047043	1.0664146	2005	N-terminal domain of molybdenum-binding protein	R	conserved hypothetical protein	1.414741	3.210785	1.1059589	2998	ABC-type tungstate transport system, permease component	H	binding protein, putative	 0.000000e+00	 0	2.888809e-04	 1.966280e-03	 3.983041e-02	 1.158888e-01	3.280463e-02		 0	 6	 TRUE	FALSE	 -6	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5212696	0.6312229	U	0.4686274	0.6162291
13773	129	182008	182009	1	 -13	Same	+	+	10.538476	0	 14.932925	 14.93292497	1.414741	3.210785	1.1059589	2998	ABC-type tungstate transport system, permease component	H	binding protein, putative	1.424693	3.482375	1.2069153	4662	ABC-type tungstate transport system, periplasmic component	H	sulfate transport system, permease protein, putative	 1.078599e-01	 6	9.903783e-05	 9.785852e-04	 3.057853e-02	 4.579314e-02	7.520870e-03	H	 6	 6	FALSE	FALSE	 -5	 TRUE	2.6653753	1.8759625	0.5480306	2.6799517	0.7537284	1.0372045	0.5185987	0.6441287	Y	1.4497162	0.9163005
13773	129	182009	182010	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.424693	3.482375	1.2069153	4662	ABC-type tungstate transport system, periplasmic component	H	sulfate transport system, permease protein, putative	1.300110	2.908756	0.9731358	3839	ABC-type sugar transport systems, ATPase components	G	sulfate transport system, ATP-binding protein, putative	 0.000000e+00	 0	1.552083e-02	 4.039198e-03	 1.242749e-01	 1.654462e-01	5.937158e-01	0	 6	 0	FALSE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5367822	0.4775886	N	0.5492530	0.6245624
13773	129	182010	182011	1	   8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.300110	2.908756	0.9731358	3839	ABC-type sugar transport systems, ATPase components	G	sulfate transport system, ATP-binding protein, putative	1.354465	3.003846	1.0204928	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase	 0.000000e+00	 0	2.954441e-03	 1.466343e-02	 1.579251e-01	 7.111283e-01	3.740350e-02		 0	 8	FALSE	FALSE	 -3	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7576591	0.6288792	U	0.4686274	0.6162291
13773	129	182011	182012	1	  34	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.354465	3.003846	1.0204928	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase	1.466907	3.009005	1.0500426	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.264306e-02	-1.503715e-03	-2.009154e-02	-1.806681e-01	9.847097e-01		 8	 0	 TRUE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4700975	0.4408238	U	0.4686274	0.6162291
13773	129	182012	182013	1	 103	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.466907	3.009005	1.0500426	-	-	-	conserved hypothetical protein	1.482881	3.262711	1.1043710	1708	Predicted nucleotidyltransferases	R	paREP11	 0.000000e+00	 0	2.551909e-04	 4.885061e-04	 2.835622e-02	 9.254633e-02	2.103947e-02		 0	 0	 TRUE	FALSE	 -5	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179098	0.6370483	U	0.4686274	0.6162291
13773	129	182013	182014	1	  22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.482881	3.262711	1.1043710	1708	Predicted nucleotidyltransferases	R	paREP11	1.354620	2.938037	1.0101300	1530	Ribonucleases G and E	J	conserved hypothetical protein	 0.000000e+00	 0	1.645106e-02	-3.047242e-03	 6.373125e-03	-2.894660e-01	1.291877e+00		 0	 5	FALSE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4429392	0.4242983	U	0.4686274	0.6162291
13773	129	182014	182015	1	  29	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.354620	2.938037	1.0101300	1530	Ribonucleases G and E	J	conserved hypothetical protein	1.364532	3.083277	1.0663114	-	-	-	hypothetical protein	 0.000000e+00	 0	9.824485e-05	 8.405847e-03	 1.143989e-01	 5.253059e-01	2.723510e-03		 5	 0	FALSE	FALSE	 -3	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6862988	0.6489041	U	0.4686274	0.6162291
13773	129	182015	182016	1	  14	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.364532	3.083277	1.0663114	-	-	-	hypothetical protein	1.428800	3.234002	1.0423831	1487	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 0.000000e+00	 0	4.130468e-03	 1.962424e-03	 2.581882e-02	 9.229071e-02	3.216622e-01		 0	 5	FALSE	FALSE	 -2	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178794	0.5343942	U	0.4686274	0.6162291
13773	129	182016	182017	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	 -0.33174076	1.428800	3.234002	1.0423831	1487	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.466663	3.209332	1.0815779	83	Homoserine kinase	E	homoserine kinase	 6.125049e-02	 5	1.433575e-03	-3.449885e-04	 1.599990e-02	-3.130387e-02	1.362703e-01		 5	15	FALSE	FALSE	 -1	FALSE	0.4469764	0.2502545	0.5480306	0.4469764	0.7448207	0.8869692	0.5118079	0.5967973	U	0.4686274	0.5414575
13773	129	182017	182018	1	 -43	Same	-	-	 0.000000	0	  0.000000	 -0.77438996	1.466663	3.209332	1.0815779	83	Homoserine kinase	E	homoserine kinase	1.376838	2.990896	1.0123534	1878	Predicted metal-dependent hydrolase	R	conserved hypothetical protein	-3.027093e-02	15	8.068472e-03	-1.138448e-03	 2.095011e-02	-1.454174e-01	7.230872e-01		15	29	 TRUE	FALSE	 -2	 TRUE	0.4469764	0.2193655	0.5480306	0.4469764	0.7783720	0.5246684	0.4782875	0.4626259	U	0.4686274	0.5316714
13773	129	182018	182019	1	 295	Same	-	-	 0.000000	0	  0.000000	 -0.31560878	1.376838	2.990896	1.0123534	1878	Predicted metal-dependent hydrolase	R	conserved hypothetical protein	1.494937	3.618437	1.2134142	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	 3.931725e-02	 3	1.394740e-02	-3.246440e-03	-2.652101e-02	-2.898936e-01	1.179299e+00		29	 3	 TRUE	FALSE	 -3	 TRUE	0.4469764	0.2518128	0.5480306	0.4469764	0.7136133	0.8022192	0.4427597	0.4292263	U	0.4686274	0.5419504
13773	129	182019	182020	1	 -19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.494937	3.618437	1.2134142	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	1.451804	3.301686	1.1585958	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.860460e-03	 1.791175e-05	 1.613235e-02	 4.716667e-02	1.391181e-01		 3	 0	 TRUE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186837	0.5960694	U	0.4686274	0.6162291
13773	129	182020	182021	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.451804	3.301686	1.1585958	-	-	-	conserved within P. aerophilum	1.425844	3.431074	1.1845175	-	-	-	hypothetical protein	 0.000000e+00	 0	6.739136e-04	-1.050924e-05	 2.227199e-02	-1.638582e-02	6.969924e-02		 0	 0	 TRUE	FALSE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5165375	0.6179109	U	0.4686274	0.6162291
13773	129	182021	182022	1	  72	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.425844	3.431074	1.1845175	-	-	-	hypothetical protein	1.334789	3.008826	1.0466275	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	egghead homolog	 0.000000e+00	 0	8.291103e-03	 2.979057e-03	 8.844047e-02	 1.407920e-01	4.802713e-01		 0	 0	 TRUE	FALSE	 -6	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5280253	0.4966064	U	0.4686274	0.6162291
13773	129	182022	182023	1	 150	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.334789	3.008826	1.0466275	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	egghead homolog	1.454367	3.117971	1.0428534	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	1.429901e-02	-3.468372e-04	-1.782357e-02	-1.072388e-01	9.650084e-01		 0	 1	FALSE	FALSE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4887314	0.4419241	U	0.4686274	0.6162291
13773	129	182023	182024	1	 -28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.454367	3.117971	1.0428534	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.490593	3.203013	1.0832090	1708	Predicted nucleotidyltransferases	R	hypothetical protein	 0.000000e+00	 0	1.312328e-03	 1.166016e-04	 2.598098e-02	 5.577954e-02	1.029115e-01		 1	 0	FALSE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187068	0.6052131	U	0.4686274	0.6162291
13773	129	182024	182025	1	  38	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.490593	3.203013	1.0832090	1708	Predicted nucleotidyltransferases	R	hypothetical protein	1.586574	3.316826	1.0399624	-	-	-	hypothetical protein	 0.000000e+00	 0	9.212265e-03	 5.299175e-03	 1.252015e-01	 3.747153e-01	1.556100e-01		 0	 0	FALSE	FALSE	 -3	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6226910	0.5912363	U	0.4686274	0.6162291
13773	129	182025	182026	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.586574	3.316826	1.0399624	-	-	-	hypothetical protein	1.405064	3.104771	1.0671192	-	-	-	hypothetical protein	 0.000000e+00	 0	3.294583e-02	-6.262774e-03	-9.344454e-02	-3.044159e-01	1.446269e+00		 0	 0	FALSE	FALSE	 -2	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4392887	0.4186719	U	0.4686274	0.6162291
13773	129	182026	182027	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.405064	3.104771	1.0671192	-	-	-	hypothetical protein	1.436330	3.108750	1.0671967	4826	Serine protease inhibitor	O	serine protease inhibitor (serpin)	 0.000000e+00	 0	9.775817e-04	 6.978255e-04	 2.402233e-02	 1.807035e-02	9.756633e-02		 0	 5	FALSE	FALSE	 -1	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178198	0.6075710	U	0.4686274	0.6162291
13773	129	182027	182028	1	 -67	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.436330	3.108750	1.0671967	4826	Serine protease inhibitor	O	serine protease inhibitor (serpin)	1.524755	3.435518	1.1404117	-	-	-	hypothetical protein	 0.000000e+00	 0	7.818835e-03	-1.105008e-03	 2.090895e-02	-3.227395e-02	4.856047e-01		 5	 0	 TRUE	FALSE	 -2	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5114782	0.4950121	U	0.4686274	0.6162291
13773	129	182028	182029	1	 172	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.524755	3.435518	1.1404117	-	-	-	hypothetical protein	1.474866	3.435088	1.0800702	-	-	-	hypothetical protein	 0.000000e+00	 0	2.488873e-03	 1.722027e-03	 2.860386e-02	 2.035741e-01	1.104300e-01		 0	 0	 TRUE	FALSE	 -3	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5506266	0.6027963	U	0.4686274	0.6162291
13773	129	182029	182030	1	 418	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.474866	3.435088	1.0800702	-	-	-	hypothetical protein	1.357922	3.044823	1.0750385	1409	Predicted phosphohydrolases	R	hypothetical protein	 0.000000e+00	 0	1.367583e-02	-2.194045e-03	 1.587212e-02	-2.306208e-01	1.097429e+00		 0	 0	 TRUE	FALSE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4569294	0.4330324	U	0.4686274	0.6162291
13773	129	182030	182031	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.357922	3.044823	1.0750385	1409	Predicted phosphohydrolases	R	hypothetical protein	1.349385	3.101365	1.1438373	-	-	-	hypothetical protein	 0.000000e+00	 0	7.288218e-05	 9.534718e-03	 1.364583e-01	 5.731770e-01	2.412521e-03		 0	 0	 TRUE	FALSE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7095488	0.6495169	U	0.4686274	0.6162291
13773	129	182031	182032	1	 -12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.349385	3.101365	1.1438373	-	-	-	hypothetical protein	1.410312	3.187466	1.1073070	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	3.712105e-03	 4.190542e-03	 4.759537e-02	 2.436752e-01	2.213258e-01		 0	 0	 TRUE	FALSE	 -6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5670320	0.5739549	U	0.4686274	0.6162291
13773	129	182032	182033	1	  85	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.410312	3.187466	1.1073070	-	-	-	conserved hypothetical protein	1.338158	3.028581	1.0791584	1840	ABC-type Fe3+ transport system, periplasmic component	P	extracellular solute binding protein, conjectural	 0.000000e+00	 0	5.206242e-03	 4.651764e-03	 1.034037e-01	 2.630449e-01	2.836809e-01		 0	 1	 TRUE	FALSE	 -7	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5751306	0.5496363	U	0.4686274	0.6162291
13773	129	182033	182034	1	  17	Convergent	+	-	 2.079442	0	  2.079442	  2.07944154	1.338158	3.028581	1.0791584	1840	ABC-type Fe3+ transport system, periplasmic component	P	extracellular solute binding protein, conjectural	1.309813	3.156580	1.1122759	1178	ABC-type Fe3+ transport system, permease component	P	molybdenum transport system permease protein, putative	 2.193686e-02	 1	8.034346e-04	 1.603179e-02	 2.265280e-01	 7.800642e-01	6.370563e-03	P	 1	15	FALSE	FALSE	 -6	FALSE	2.9335626	1.6614134	0.5480306	2.9479804	0.6329203	0.6907986	0.7781878	0.6451734	Y	1.4497162	0.8895842
13773	129	182034	182035	1	  -3	Same	-	-	 4.317488	0	  6.189290	  5.79559002	1.309813	3.156580	1.1122759	1178	ABC-type Fe3+ transport system, permease component	P	molybdenum transport system permease protein, putative	1.376224	2.989944	1.0145561	3839	ABC-type sugar transport systems, ATPase components	G	transporter ATP-binding protein, putative	 1.633838e-02	10	4.410368e-03	 1.064245e-02	 1.086174e-01	 5.729926e-01	9.236375e-02	0	15	10	 TRUE	FALSE	 -7	 TRUE	2.8518134	1.8032037	0.5480306	2.8344026	0.7739415	0.6494466	0.7091474	0.6101085	N	0.5492530	0.8678508
13773	129	182035	182036	1	  84	Divergent	-	+	 0.000000	0	  0.000000	 -0.08004271	1.376224	2.989944	1.0145561	3839	ABC-type sugar transport systems, ATPase components	G	transporter ATP-binding protein, putative	1.322230	2.897438	0.9933358	5257	Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)	J	translation initiation factor aIF-2 gamma subunit, putative	 2.467265e-03	10	2.915345e-03	 9.709102e-03	 1.622769e-01	 5.515768e-01	7.256470e-02	0	10	12	 TRUE	FALSE	 -8	FALSE	0.4469764	0.2967290	0.5480306	0.4469764	0.7739415	0.5040782	0.6996520	0.6171587	N	0.5492530	0.5648358
13773	129	182036	182037	1	 149	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.322230	2.897438	0.9933358	5257	Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)	J	translation initiation factor aIF-2 gamma subunit, putative	1.299173	3.337201	1.1903911	-	-	-	hypothetical protein	 0.000000e+00	 0	5.316262e-04	 1.966125e-02	 2.670985e-01	 8.423833e-01	3.313094e-03		12	 0	FALSE	FALSE	 -7	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7927256	0.6480385	U	0.4686274	0.6162291
13773	129	182037	182038	1	  22	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.299173	3.337201	1.1903911	-	-	-	hypothetical protein	1.520479	3.641497	1.1437996	-	-	-	hypothetical protein	 0.000000e+00	 0	4.897639e-02	-1.051627e-02	-1.489437e-01	-5.923576e-01	2.472835e+00		 0	 0	 TRUE	FALSE	 -8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3952121	0.4035865	U	0.4686274	0.6162291
13773	129	182038	182039	1	 282	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.520479	3.641497	1.1437996	-	-	-	hypothetical protein	1.520223	3.362322	1.1049881	2254	Predicted HD superfamily hydrolase, possibly a nuclease	L	conserved hypothetical protein	 0.000000e+00	 0	6.540419e-08	 4.755190e-03	 7.624713e-02	 3.888247e-01	1.472486e-05		 0	 0	FALSE	FALSE	 -7	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6297054	0.6556702	U	0.4686274	0.6162291
13773	129	182039	182040	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.520223	3.362322	1.1049881	2254	Predicted HD superfamily hydrolase, possibly a nuclease	L	conserved hypothetical protein	1.529734	3.351054	1.1063138	1203	Predicted helicases	R	helicase, probable	 0.000000e+00	 0	9.046603e-05	 5.392255e-03	 8.734026e-02	 4.198352e-01	2.886073e-03		 0	 3	 TRUE	FALSE	 -8	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6437776	0.6487603	U	0.4686274	0.6162291
13773	129	182040	182041	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.529734	3.351054	1.1063138	1203	Predicted helicases	R	helicase, probable	1.579735	3.352593	1.0594224	-	-	-	hypothetical protein	 0.000000e+00	 0	2.500033e-03	 1.005449e-02	 1.645415e-01	 5.582253e-01	2.285828e-02		 3	 0	 TRUE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7023937	0.6363673	U	0.4686274	0.6162291
13773	129	182041	182042	1	 123	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.579735	3.352593	1.0594224	-	-	-	hypothetical protein	1.351635	2.812378	0.9560839	-	-	-	hypothetical protein	 0.000000e+00	 0	5.202940e-02	-1.280309e-02	-1.455173e-01	-6.349813e-01	2.543327e+00		 0	 0	 TRUE	FALSE	-10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3910089	0.4031382	U	0.4686274	0.6162291
13773	129	182042	182043	1	 213	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.351635	2.812378	0.9560839	-	-	-	hypothetical protein	1.291084	2.787502	1.0134974	-	-	-	hypothetical protein	 0.000000e+00	 0	3.666421e-03	 1.599203e-02	 2.477113e-01	 7.375688e-01	3.681215e-02		 0	 0	FALSE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7644228	0.6292170	U	0.4686274	0.6162291
13773	129	182043	182044	1	1176	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.291084	2.787502	1.0134974	-	-	-	hypothetical protein	1.356913	3.117865	1.0828814	5551	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.333466e-03	 1.514591e-02	 1.552340e-01	 7.103060e-01	4.851488e-02		 0	 1	FALSE	FALSE	 -8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7572110	0.6244084	U	0.4686274	0.6162291
13773	129	182044	182045	1	  29	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.356913	3.117865	1.0828814	5551	Uncharacterized conserved protein	S	conserved hypothetical protein	1.326907	3.023658	1.0162441	-	-	-	hypothetical protein	 0.000000e+00	 0	9.003584e-04	 1.176135e-02	 1.749400e-01	 6.506880e-01	1.950985e-02		 1	 0	 TRUE	FALSE	 -9	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7370137	0.6378952	U	0.4686274	0.6162291
13773	129	182045	182046	1	 -70	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.326907	3.023658	1.0162441	-	-	-	hypothetical protein	1.478232	3.447429	1.0830072	-	-	-	paREP9, associated with SRSRs	 0.000000e+00	 0	2.289921e-02	-3.341100e-03	-5.585199e-02	-3.098193e-01	1.517264e+00		 0	 0	FALSE	FALSE	 -8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4374168	0.4167010	U	0.4686274	0.6162291
13773	129	182046	182047	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.478232	3.447429	1.0830072	-	-	-	paREP9, associated with SRSRs	1.346565	2.927314	1.0008937	1468	RecB family exonuclease	L	conserved hypothetical protein	 0.000000e+00	 0	1.733629e-02	-2.813508e-03	 1.391853e-02	-2.827845e-01	1.334087e+00		 0	 0	 TRUE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4445399	0.4227586	U	0.4686274	0.6162291
13773	129	182047	182048	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.346565	2.927314	1.0008937	1468	RecB family exonuclease	L	conserved hypothetical protein	1.404625	3.118679	1.0647742	1343	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	 0.000000e+00	 0	3.370938e-03	 4.902635e-03	 5.570879e-02	 2.951062e-01	1.893552e-01	L	 0	 0	 TRUE	FALSE	-10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5908679	0.5830153	Y	1.4497162	0.7118045
13773	129	182048	182049	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.404625	3.118679	1.0647742	1343	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	1.343412	2.969981	1.0219731	1518	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	 0.000000e+00	 0	3.747033e-03	 5.050106e-03	 1.038409e-01	 3.004667e-01	2.022583e-01	L	 0	 6	 TRUE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5921148	0.5792906	Y	1.4497162	0.7118045
13773	129	182049	182050	1	 -16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.343412	2.969981	1.0219731	1518	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	1.440184	3.167706	1.0901257	4343	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 3.502625e-03	 3	9.364995e-03	 1.210301e-03	 5.597312e-03	 7.527348e-03	6.530823e-01		 6	 3	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5263810	0.5191516	0.4700463	U	0.4686274	0.6162291
13773	129	182050	182051	1	1464	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.440184	3.167706	1.0901257	4343	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.271334	2.843642	1.0427513	-	-	-	hypothetical protein	 0.000000e+00	 0	2.851060e-02	 2.018182e-03	 1.263501e-01	 9.004546e-03	9.380584e-01		 3	 0	 TRUE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5189422	0.4437091	U	0.4686274	0.6162291
13773	129	182051	182052	1	  67	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.271334	2.843642	1.0427513	-	-	-	hypothetical protein	1.244706	2.780541	0.9847719	-	-	-	hypothetical protein	 0.000000e+00	 0	7.090157e-04	 3.721583e-02	 4.820275e-01	 9.687391e-01	1.702194e-04		 0	 0	FALSE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8138624	0.6547351	U	0.4686274	0.6162291
13773	129	182052	182053	1	  41	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.244706	2.780541	0.9847719	-	-	-	hypothetical protein	1.480587	3.495655	1.1531062	-	-	-	hypothetical protein	 0.000000e+00	 0	5.563995e-02	-6.034137e-03	-1.561368e-01	-3.657484e-01	1.849433e+00		 0	 0	FALSE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4245530	0.4102757	U	0.4686274	0.6162291
13773	129	182053	182054	1	   6	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.480587	3.495655	1.1531062	-	-	-	hypothetical protein	1.372961	3.028462	1.0203953	3864	Uncharacterized protein conserved in bacteria	S	hypothetical protein	 0.000000e+00	 0	1.158355e-02	-2.289801e-03	 7.422306e-03	-2.359942e-01	1.016955e+00		 0	 0	FALSE	FALSE	-10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4547333	0.4380418	U	0.4686274	0.6162291
13773	129	182054	182055	1	  63	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.372961	3.028462	1.0203953	3864	Uncharacterized protein conserved in bacteria	S	hypothetical protein	1.495283	3.566515	1.1553330	-	-	-	hypothetical protein	 0.000000e+00	 0	1.496282e-02	-3.442419e-03	-3.024212e-02	-3.046827e-01	1.245202e+00		 0	 0	 TRUE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4391029	0.4262651	U	0.4686274	0.6162291
13773	129	182055	182056	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.495283	3.566515	1.1553330	-	-	-	hypothetical protein	1.312817	2.965511	1.0004835	714	MoxR-like ATPases	R	conserved hypothetical protein	 0.000000e+00	 0	3.329375e-02	-6.082122e-03	-6.501655e-03	-4.348952e-01	1.929605e+00		 0	 2	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4137159	0.4092599	U	0.4686274	0.6162291
13773	129	182056	182057	1	  92	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.312817	2.965511	1.0004835	714	MoxR-like ATPases	R	conserved hypothetical protein	1.376946	2.978809	1.0363653	-	-	-	hypothetical protein	 0.000000e+00	 0	4.112512e-03	 1.031646e-02	 1.066687e-01	 5.581505e-01	9.050724e-02		 2	 0	 TRUE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7020006	0.6107212	U	0.4686274	0.6162291
13773	129	182057	182058	1	 667	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.376946	2.978809	1.0363653	-	-	-	hypothetical protein	1.482439	3.371336	1.1076940	-	-	-	paREP1	 0.000000e+00	 0	1.112872e-02	-2.311284e-03	-1.791342e-02	-2.347143e-01	9.908117e-01		 0	 0	FALSE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4552081	0.4400938	U	0.4686274	0.6162291
13773	129	182058	182059	1	  43	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.482439	3.371336	1.1076940	-	-	-	paREP1	1.642247	3.599927	1.0243453	-	-	-	hypothetical protein	 0.000000e+00	 0	2.553851e-02	 5.925296e-03	 1.800724e-01	 3.545746e-01	2.919151e-01		 0	 0	FALSE	FALSE	-11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6144979	0.5460473	U	0.4686274	0.6162291
13773	129	182059	182060	1	 -22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.642247	3.599927	1.0243453	-	-	-	hypothetical protein	1.451408	3.276754	1.1254705	4938	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	3.641934e-02	 2.945562e-06	-7.173007e-02	 8.864366e-02	6.857314e-01		 0	 0	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177538	0.4659563	U	0.4686274	0.6162291
13773	129	182060	182061	1	 324	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.451408	3.276754	1.1254705	4938	Uncharacterized conserved protein	S	hypothetical protein	1.494283	3.033716	1.0015901	2002	Regulators of stationary/sporulation gene expression	K	conserved hypothetical protein	 0.000000e+00	 0	1.838263e-03	 6.619530e-07	 2.541708e-02	 4.483720e-02	1.379755e-01		 0	 0	 TRUE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185535	0.5962876	U	0.4686274	0.6162291
13773	129	182061	182062	1	 -25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.494283	3.033716	1.0015901	2002	Regulators of stationary/sporulation gene expression	K	conserved hypothetical protein	1.466362	3.170812	1.0578015	1848	Predicted nucleic acid-binding protein, contains PIN domain	R	hypothetical protein	 0.000000e+00	 0	7.795845e-04	 6.420419e-04	 2.414203e-02	 1.086854e-01	5.515108e-02		 0	 0	FALSE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197096	0.6221915	U	0.4686274	0.6162291
13773	129	182062	182063	1	 236	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.466362	3.170812	1.0578015	1848	Predicted nucleic acid-binding protein, contains PIN domain	R	hypothetical protein	1.433997	3.104458	1.0824354	-	-	-	hypothetical protein	 0.000000e+00	 0	1.047475e-03	-2.603975e-04	 1.789244e-02	-1.534802e-02	8.912722e-02		 0	 0	FALSE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5169628	0.6113614	U	0.4686274	0.6162291
13773	129	182063	182064	1	 227	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.433997	3.104458	1.0824354	-	-	-	hypothetical protein	1.595470	3.490906	1.0550015	-	-	-	hypothetical protein	 0.000000e+00	 0	2.607344e-02	-2.506278e-03	 4.338098e-02	-5.678259e-02	8.580759e-01		 0	 0	FALSE	FALSE	-10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5048385	0.4495188	U	0.4686274	0.6162291
13773	129	182064	182065	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.595470	3.490906	1.0550015	-	-	-	hypothetical protein	1.576129	3.533128	0.9526352	-	-	-	hypothetical protein	 0.000000e+00	 0	3.740715e-04	 1.797169e-02	 2.176646e-01	 7.031798e-01	1.847086e-03		 0	 0	FALSE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7531957	0.6505622	U	0.4686274	0.6162291
13773	129	182065	182066	1	 105	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.576129	3.533128	0.9526352	-	-	-	hypothetical protein	1.360192	3.081132	1.0569825	-	-	-	hypothetical protein	 0.000000e+00	 0	4.662900e-02	-1.137609e-02	-1.306648e-01	-5.896423e-01	2.367772e+00		 0	 0	FALSE	FALSE	 -8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3954444	0.4042444	U	0.4686274	0.6162291
13773	129	182066	182067	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.360192	3.081132	1.0569825	-	-	-	hypothetical protein	1.397411	3.069720	1.0825219	1353	Predicted hydrolase of the HD superfamily (permuted catalytic motifs)	R	conserved hypothetical protein	 0.000000e+00	 0	1.385289e-03	 4.923179e-03	 6.457833e-02	 3.233344e-01	7.464679e-02		 0	 1	 TRUE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6015744	0.6164920	U	0.4686274	0.6162291
13773	129	182067	182068	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.397411	3.069720	1.0825219	1353	Predicted hydrolase of the HD superfamily (permuted catalytic motifs)	R	conserved hypothetical protein	1.412911	3.152547	1.0912486	-	-	-	hypothetical protein	 0.000000e+00	 0	2.402316e-04	 2.077330e-03	 4.138695e-02	 1.286458e-01	2.597465e-02		 1	 0	 TRUE	FALSE	-10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5238475	0.6350049	U	0.4686274	0.6162291
13773	129	182068	182069	1	 -12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.412911	3.152547	1.0912486	-	-	-	hypothetical protein	1.369291	3.038229	1.0231058	-	-	-	hypothetical protein	 0.000000e+00	 0	1.902666e-03	 3.159455e-03	 7.103628e-02	 1.905456e-01	1.419954e-01		 0	 0	 TRUE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5461636	0.5953411	U	0.4686274	0.6162291
13773	129	182069	182070	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.369291	3.038229	1.0231058	-	-	-	hypothetical protein	1.365827	3.020195	1.0301226	1337	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	conserved hypothetical protein	 0.000000e+00	 0	1.199841e-05	 7.025087e-03	 1.043519e-01	 4.575132e-01	6.414149e-04		 0	 1	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6590654	0.6527891	U	0.4686274	0.6162291
13773	129	182070	182071	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.365827	3.020195	1.0301226	1337	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	conserved hypothetical protein	1.454863	3.097881	1.0828116	-	-	-	hypothetical protein	 0.000000e+00	 0	7.927452e-03	-2.969658e-04	-1.296881e-03	-8.938697e-02	6.705636e-01		 1	 0	 TRUE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4953497	0.4684793	U	0.4686274	0.6162291
13773	129	182071	182072	1	  85	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.454863	3.097881	1.0828116	-	-	-	hypothetical protein	1.352588	2.931851	1.0035076	-	-	-	hypothetical protein	 0.000000e+00	 0	1.046025e-02	-3.429137e-04	 4.148930e-02	-9.904235e-02	7.980262e-01		 0	 0	 TRUE	FALSE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4914915	0.4555447	U	0.4686274	0.6162291
13773	129	182072	182073	1	 205	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.352588	2.931851	1.0035076	-	-	-	hypothetical protein	1.340636	2.972672	0.9944135	1517	Uncharacterized protein predicted to be involved in DNA repair	L	hypothetical protein	 0.000000e+00	 0	1.428544e-04	 1.094331e-02	 1.550506e-01	 6.329334e-01	4.255485e-03		 0	 0	FALSE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7306089	0.6470653	U	0.4686274	0.6162291
13773	129	182073	182074	1	  89	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.340636	2.972672	0.9944135	1517	Uncharacterized protein predicted to be involved in DNA repair	L	hypothetical protein	1.333819	2.773058	0.9955771	-	-	-	hypothetical protein	 0.000000e+00	 0	4.646986e-05	 1.302211e-02	 1.769486e-01	 7.124476e-01	9.423910e-04		 0	 0	 TRUE	FALSE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7585562	0.6519201	U	0.4686274	0.6162291
13773	129	182074	182075	1	  25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.333819	2.773058	0.9955771	-	-	-	hypothetical protein	1.376773	3.024801	1.0337349	1517	Uncharacterized protein predicted to be involved in DNA repair	L	hypothetical protein	 0.000000e+00	 0	1.845051e-03	 8.773323e-03	 1.023529e-01	 5.277390e-01	6.031303e-02		 0	 0	FALSE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6881694	0.6204913	U	0.4686274	0.6162291
13773	129	182075	182076	1	   4	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.376773	3.024801	1.0337349	1517	Uncharacterized protein predicted to be involved in DNA repair	L	hypothetical protein	1.367267	2.910238	0.9721223	-	-	-	hypothetical protein	 0.000000e+00	 0	9.036126e-05	 6.277427e-03	 9.796727e-02	 4.188928e-01	4.665425e-03		 0	 0	FALSE	FALSE	-12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6431479	0.6465894	U	0.4686274	0.6162291
13773	129	182076	182077	1	 132	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.367267	2.910238	0.9721223	-	-	-	hypothetical protein	1.497987	3.353226	1.1364624	1517	Uncharacterized protein predicted to be involved in DNA repair	L	hypothetical protein	 0.000000e+00	 0	1.708754e-02	-3.919726e-03	-3.755202e-02	-3.377323e-01	1.385996e+00		 0	 0	 TRUE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4306337	0.4202601	U	0.4686274	0.6162291
13773	129	182077	182078	1	 104	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.497987	3.353226	1.1364624	1517	Uncharacterized protein predicted to be involved in DNA repair	L	hypothetical protein	1.399525	3.133001	1.0334108	-	-	-	hypothetical protein	 0.000000e+00	 0	9.694636e-03	-2.416706e-03	-6.200420e-03	-2.112252e-01	8.495661e-01		 0	 0	 TRUE	FALSE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4613246	0.4506552	U	0.4686274	0.6162291
13773	129	182078	182079	1	 283	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.399525	3.133001	1.0334108	-	-	-	hypothetical protein	1.417134	3.036227	1.0025047	-	-	-	hypothetical protein	 0.000000e+00	 0	3.100829e-04	 1.776902e-03	 3.766229e-02	 1.044664e-01	3.308323e-02		 0	 0	FALSE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192400	0.6310514	U	0.4686274	0.6162291
13773	129	182079	182080	1	  11	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.417134	3.036227	1.0025047	-	-	-	hypothetical protein	1.379378	3.110083	1.0364624	4006	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	1.425527e-03	 2.467106e-03	 5.977346e-02	 1.437352e-01	1.171604e-01		 0	 0	FALSE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5286825	0.6014840	U	0.4686274	0.6162291
13773	129	182080	182081	1	  94	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.379378	3.110083	1.0364624	4006	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.348021	3.026395	1.0197298	433	Predicted ATPase	R	conserved hypothetical protein	 0.000000e+00	 0	9.832856e-04	 7.444288e-03	 1.217448e-01	 4.640981e-01	4.136213e-02		 0	 0	FALSE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6614252	0.6275054	U	0.4686274	0.6162291
13773	129	182081	182082	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.348021	3.026395	1.0197298	433	Predicted ATPase	R	conserved hypothetical protein	1.345393	3.002090	1.0065481	5551	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	6.907119e-06	 1.095744e-02	 1.502525e-01	 6.382108e-01	2.850733e-04		 0	 0	FALSE	FALSE	-10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7327336	0.6540676	U	0.4686274	0.6162291
13773	129	182082	182083	1	  80	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.345393	3.002090	1.0065481	5551	Uncharacterized conserved protein	S	conserved hypothetical protein	1.258508	2.783743	1.0040306	5551	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	7.548957e-03	 2.044581e-02	 3.257432e-01	 7.931163e-01	3.061829e-02		 0	 0	FALSE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7823766	0.6326945	U	0.4686274	0.6162291
13773	129	182083	182084	1	 382	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.258508	2.783743	1.0040306	5551	Uncharacterized conserved protein	S	hypothetical protein	1.476612	3.751579	1.1748057	-	-	-	hypothetical protein	 0.000000e+00	 0	4.756947e-02	-4.864444e-03	-1.290049e-01	-3.264443e-01	1.728327e+00		 0	 0	FALSE	FALSE	 -8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4343595	0.4118192	U	0.4686274	0.6162291
13773	129	182084	182085	1	 -24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.476612	3.751579	1.1748057	-	-	-	hypothetical protein	1.381519	3.284383	1.1400881	-	-	-	hypothetical protein	 0.000000e+00	 0	9.042703e-03	-1.762174e-03	 1.091741e-02	-1.902558e-01	8.187264e-01		 0	 0	 TRUE	FALSE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4674923	0.4531269	U	0.4686274	0.6162291
13773	129	182085	182086	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.381519	3.284383	1.1400881	-	-	-	hypothetical protein	1.432518	3.639107	1.1441816	-	-	-	hypothetical protein	 0.000000e+00	 0	2.600865e-03	 1.318868e-03	 2.466428e-02	 4.789349e-02	2.389957e-01		 0	 0	 TRUE	FALSE	-10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187278	0.5668045	U	0.4686274	0.6162291
13773	129	182086	182087	1	  76	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.432518	3.639107	1.1441816	-	-	-	hypothetical protein	1.497924	3.521082	1.1034645	-	-	-	hypothetical protein	 0.000000e+00	 0	4.277942e-03	-8.782731e-04	 1.506230e-02	-4.128085e-02	3.330787e-01		 0	 0	 TRUE	FALSE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5086893	0.5302713	U	0.4686274	0.6162291
13773	129	182087	182088	1	 422	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.497924	3.521082	1.1034645	-	-	-	hypothetical protein	1.629914	3.572136	1.0607534	-	-	-	hypothetical protein	 0.000000e+00	 0	1.742139e-02	 8.306753e-03	 1.932978e-01	 4.491660e-01	1.736644e-01		 0	 0	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6557322	0.5866463	U	0.4686274	0.6162291
13773	129	182088	182089	1	  50	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.629914	3.572136	1.0607534	-	-	-	hypothetical protein	1.588468	3.623836	1.1431609	-	-	-	hypothetical protein	 0.000000e+00	 0	1.717724e-03	 2.447088e-02	 2.736412e-01	 7.711963e-01	3.960398e-03		 0	 0	 TRUE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7735652	0.6473139	U	0.4686274	0.6162291
13773	129	182089	182090	1	  24	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.588468	3.623836	1.1431609	-	-	-	hypothetical protein	1.427006	3.242178	1.0796840	-	-	-	hypothetical protein	 0.000000e+00	 0	2.607023e-02	-3.342888e-03	-6.455463e-02	-1.293997e-01	1.000000e+00		 0	 0	FALSE	FALSE	-12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4818618	0.4392459	U	0.4686274	0.6162291
13773	129	182090	182091	1	   9	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.427006	3.242178	1.0796840	-	-	-	hypothetical protein	1.550854	3.498771	1.1209918	-	-	-	paREP5a	 0.000000e+00	 0	1.533833e-02	-2.425569e-03	 1.598890e-02	-1.138108e-01	8.062744e-01		 0	 0	 TRUE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4873356	0.4545258	U	0.4686274	0.6162291
13773	129	182091	182092	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.550854	3.498771	1.1209918	-	-	-	paREP5a	1.563780	3.421659	0.9726883	-	-	-	paREP5b	 0.000000e+00	 0	1.670792e-04	 1.117808e-02	 1.583889e-01	 5.867833e-01	1.781708e-03		 0	 0	FALSE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7160331	0.6506613	U	0.4686274	0.6162291
13773	129	182092	182093	1	 170	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.563780	3.421659	0.9726883	-	-	-	paREP5b	1.450557	2.956182	0.9775689	2105	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.281938e-02	-9.395069e-05	-1.243501e-02	 6.889114e-02	4.898926e-01		 0	 3	FALSE	FALSE	-11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181643	0.4941753	U	0.4686274	0.6162291
13773	129	182093	182094	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.450557	2.956182	0.9775689	2105	Uncharacterized conserved protein	S	conserved hypothetical protein	1.341966	3.120194	1.0612757	2512	Uncharacterized membrane-associated protein/domain	S	conserved protein	 0.000000e+00	 0	1.179200e-02	 9.147640e-05	 5.221420e-02	-7.197983e-02	8.284772e-01		 3	 0	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5007676	0.4521115	U	0.4686274	0.6162291
13773	129	182094	182095	1	  35	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.341966	3.120194	1.0612757	2512	Uncharacterized membrane-associated protein/domain	S	conserved protein	1.345662	2.893263	0.9877382	-	-	-	hypothetical protein	 0.000000e+00	 0	1.366161e-05	 1.156979e-02	 1.539954e-01	 6.623407e-01	3.115780e-04		 0	 0	 TRUE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7400339	0.6539188	U	0.4686274	0.6162291
13773	129	182095	182096	1	 435	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.345662	2.893263	0.9877382	-	-	-	hypothetical protein	1.484898	3.511938	1.1944881	-	-	-	hypothetical protein	 0.000000e+00	 0	1.938658e-02	-3.542502e-03	-4.622059e-02	-3.280811e-01	1.470366e+00		 0	 0	 TRUE	FALSE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4335835	0.4176750	U	0.4686274	0.6162291
13773	129	182096	182097	1	 128	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.484898	3.511938	1.1944881	-	-	-	hypothetical protein	1.359217	3.035841	1.0350597	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 0.000000e+00	 0	1.579573e-02	-3.088355e-03	 3.353756e-03	-2.964927e-01	1.288391e+00		 0	 5	FALSE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4413122	0.4246128	U	0.4686274	0.6162291
13773	129	182097	182098	1	 -16	Same	-	-	 2.662588	0	  2.662588	  2.66258783	1.359217	3.035841	1.0350597	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.449629	3.131574	1.0724042	-	-	-	conserved hypothetical protein	 3.777386e-02	 1	8.174411e-03	 1.625682e-04	 1.069606e-03	-5.807014e-02	6.518425e-01		 5	 1	 TRUE	FALSE	-14	 TRUE	2.9244472	1.7076796	0.5480306	2.9399224	0.6329203	0.7874252	0.5043947	0.4702527	U	0.4686274	0.8476113
13773	129	182098	182099	1	  64	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.449629	3.131574	1.0724042	-	-	-	conserved hypothetical protein	1.389557	3.065134	1.0633282	1192	ATPases involved in chromosome partitioning	D	hypothetical protein	 0.000000e+00	 0	3.608706e-03	 1.090586e-04	 3.171529e-02	-4.030607e-02	3.419961e-01		 1	 0	 TRUE	FALSE	-15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5090252	0.5271430	U	0.4686274	0.6162291
13773	129	182099	182100	1	  -9	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.389557	3.065134	1.0633282	1192	ATPases involved in chromosome partitioning	D	hypothetical protein	1.489627	3.096056	1.0527518	-	-	-	hypothetical protein	 0.000000e+00	 0	1.001412e-02	-2.364270e-03	-1.290394e-02	-2.232336e-01	8.968948e-01		 0	 0	 TRUE	FALSE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4586203	0.4466307	U	0.4686274	0.6162291
13773	129	182100	182101	1	 230	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.489627	3.096056	1.0527518	-	-	-	hypothetical protein	1.302487	2.792072	1.1098149	-	-	-	hypothetical protein	 0.000000e+00	 0	3.502145e-02	-5.693325e-03	 6.765660e-03	-4.162730e-01	1.914708e+00		 0	 0	 TRUE	FALSE	-17	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4163181	0.4094465	U	0.4686274	0.6162291
13773	129	182101	182102	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.302487	2.792072	1.1098149	-	-	-	hypothetical protein	1.342541	3.064550	1.0435308	-	-	-	hypothetical protein	 0.000000e+00	 0	1.604327e-03	 1.620865e-02	 1.840353e-01	 7.718395e-01	1.489037e-02		 0	 0	FALSE	FALSE	-16	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7744870	0.6404563	U	0.4686274	0.6162291
13773	129	182102	182103	1	  16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.342541	3.064550	1.0435308	-	-	-	hypothetical protein	1.428632	3.320675	1.1023683	-	-	-	hypothetical protein	 0.000000e+00	 0	7.411562e-03	 2.477606e-03	 2.093234e-02	 1.100831e-01	4.696930e-01		 0	 0	 TRUE	FALSE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199426	0.4991754	U	0.4686274	0.6162291
13773	129	182103	182104	1	 426	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.428632	3.320675	1.1023683	-	-	-	hypothetical protein	1.322051	2.914105	1.0054700	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	mutT/nudix family protein	 0.000000e+00	 0	1.135941e-02	 2.943986e-03	 9.632816e-02	 1.195659e-01	5.714571e-01		 0	 3	 TRUE	FALSE	-18	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5220337	0.4812875	U	0.4686274	0.6162291
13773	129	182104	182105	1	  29	Same	+	+	 0.000000	0	  0.000000	 -0.28357905	1.322051	2.914105	1.0054700	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	mutT/nudix family protein	1.319153	2.837282	0.9486403	731	Fe-S oxidoreductases	C	conserved hypothetical protein	 7.846874e-02	 3	8.399987e-06	 1.710417e-02	 2.226498e-01	 8.014329e-01	9.954005e-05		 3	12	FALSE	FALSE	-17	 TRUE	0.4469764	0.2567499	0.5480306	0.4469764	0.7136133	0.9433797	0.7861221	0.6550803	U	0.4686274	0.5435116
13773	129	182105	182106	1	 157	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.319153	2.837282	0.9486403	731	Fe-S oxidoreductases	C	conserved hypothetical protein	1.253134	2.620533	1.1401827	-	-	-	hypothetical protein	 0.000000e+00	 0	4.358472e-03	 2.621776e-02	 3.826929e-01	 8.877942e-01	7.388346e-03		12	 0	FALSE	FALSE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8032236	0.6442479	U	0.4686274	0.6162291
13773	129	182106	182107	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.253134	2.620533	1.1401827	-	-	-	hypothetical protein	1.525278	3.592011	1.1721957	2445	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	7.406215e-02	-1.464831e-02	-2.364908e-01	-6.410586e-01	2.677229e+00		 0	 0	FALSE	FALSE	-15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3905393	0.4024852	U	0.4686274	0.6162291
13773	129	182107	182108	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.525278	3.592011	1.1721957	2445	Uncharacterized conserved protein	S	conserved hypothetical protein	1.371823	3.081781	1.0769192	1708	Predicted nucleotidyltransferases	R	paREP11	 0.000000e+00	 0	2.354845e-02	-5.879032e-03	-4.578598e-02	-4.195566e-01	1.678248e+00		 0	 0	FALSE	FALSE	-14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4154541	0.4125702	U	0.4686274	0.6162291
13773	129	182108	182109	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.371823	3.081781	1.0769192	1708	Predicted nucleotidyltransferases	R	paREP11	1.364070	2.895042	1.0274558	1708	Predicted nucleotidyltransferases	R	hypothetical protein	 0.000000e+00	 0	6.010976e-05	 6.948335e-03	 1.052655e-01	 4.527447e-01	3.138751e-03		 0	 0	FALSE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6577268	0.6484515	U	0.4686274	0.6162291
13773	129	182109	182110	1	 -30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.364070	2.895042	1.0274558	1708	Predicted nucleotidyltransferases	R	hypothetical protein	1.346838	3.013928	1.0334238	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	2.969339e-04	 9.130092e-03	 1.358859e-01	 5.609512e-01	9.650084e-03		 0	 0	 TRUE	FALSE	-14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7035757	0.6430012	U	0.4686274	0.6162291
13773	129	182110	182111	1	  59	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.346838	3.013928	1.0334238	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.326828	2.963686	0.9782251	819	Putative transcription activator	K	conserved protein (tenA homolog)	 0.000000e+00	 0	4.004108e-04	 1.302394e-02	 1.846602e-01	 7.039508e-01	6.493663e-03		 0	24	 TRUE	FALSE	-15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7540854	0.6450314	U	0.4686274	0.6162291
13773	129	182111	182112	1	 -13	Same	+	+	 0.000000	0	  0.000000	 -0.13150953	1.326828	2.963686	0.9782251	819	Putative transcription activator	K	conserved protein (tenA homolog)	1.334649	2.930500	1.0065902	-	-	-	conserved hypothetical protein	 3.122295e-02	 2	6.116821e-05	 1.454229e-02	 1.859775e-01	 7.552946e-01	4.953443e-04		24	 2	FALSE	FALSE	-14	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.7411783	0.7680630	0.6533218	U	0.4686274	0.5537552
13773	129	182112	182113	1	  56	Same	+	+	 0.000000	0	  0.000000	 -0.13150953	1.334649	2.930500	1.0065902	-	-	-	conserved hypothetical protein	1.356582	3.073122	1.0594863	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	 7.877708e-02	 2	4.810961e-04	 1.106858e-02	 1.383707e-01	 6.367654e-01	1.342966e-02		 2	 5	FALSE	FALSE	-13	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.9476794	0.7318825	0.6413060	U	0.4686274	0.5537552
13773	129	182113	182114	1	  15	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.356582	3.073122	1.0594863	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	1.299047	2.771566	1.0215941	-	-	-	ribosomal protein L24, conjectural	 0.000000e+00	 0	3.310344e-03	 1.444399e-02	 2.257334e-01	 7.034036e-01	4.230393e-02		 5	 0	FALSE	FALSE	-12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7536403	0.6271652	U	0.4686274	0.6162291
13773	129	182114	182115	1	 -16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.299047	2.771566	1.0215941	-	-	-	ribosomal protein L24, conjectural	1.408423	3.030923	1.0419023	1635	Flavoprotein involved in thiazole biosynthesis	H	thiamine biosynthetic enzyme (thi1)	 0.000000e+00	 0	1.196324e-02	 6.546215e-03	 4.302651e-02	 3.113307e-01	3.835820e-01		 0	12	 TRUE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5969203	0.5159995	U	0.4686274	0.6162291
13773	129	182115	182116	1	  87	Divergent	-	+	 0.000000	0	  0.000000	 -0.13150953	1.408423	3.030923	1.0419023	1635	Flavoprotein involved in thiazole biosynthesis	H	thiamine biosynthetic enzyme (thi1)	1.303872	3.110714	1.0452293	477	Permeases of the major facilitator superfamily	GEPR	metabolite transport protein	 2.741822e-02	 3	1.093092e-02	 6.338864e-03	 1.454301e-01	 3.072972e-01	3.685226e-01		12	 3	 TRUE	FALSE	-14	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7136133	0.7221790	0.5946306	0.5189918	U	0.4686274	0.5537552
13773	129	182116	182117	1	  92	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.303872	3.110714	1.0452293	477	Permeases of the major facilitator superfamily	GEPR	metabolite transport protein	1.347262	3.069932	1.0038248	-	-	-	P. aerophilum family 562 protein	 0.000000e+00	 0	1.882616e-03	 1.536150e-02	 1.726199e-01	 7.459856e-01	1.908342e-02		 3	 0	FALSE	FALSE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7662401	0.6380977	U	0.4686274	0.6162291
13773	129	182117	182118	1	 121	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.347262	3.069932	1.0038248	-	-	-	P. aerophilum family 562 protein	1.332650	2.858858	0.9511731	-	-	-	P. aerophilum family 577 protein	 0.000000e+00	 0	2.134954e-04	 1.236485e-02	 1.735809e-01	 6.878489e-01	4.255485e-03		 0	 0	FALSE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7492107	0.6470653	U	0.4686274	0.6162291
13773	129	182118	182119	1	  42	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.332650	2.858858	0.9511731	-	-	-	P. aerophilum family 577 protein	1.302669	3.067022	0.9890386	5551	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	8.988353e-04	 1.765983e-02	 2.475852e-01	 8.109864e-01	6.008332e-03		 0	 0	FALSE	FALSE	-11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7889446	0.6454790	U	0.4686274	0.6162291
13773	129	182119	182120	1	5876	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.302669	3.067022	0.9890386	5551	Uncharacterized conserved protein	S	conserved hypothetical protein	1.315799	2.785245	0.8751263	1468	RecB family exonuclease	L	conserved hypothetical protein	 0.000000e+00	 0	1.723899e-04	 2.016595e-02	 2.470436e-01	 8.506699e-01	1.246312e-03		 0	 1	 TRUE	FALSE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7946235	0.6515199	U	0.4686274	0.6162291
13773	129	182120	182121	1	 -16	Same	-	-	 2.197225	0	  2.197225	  2.19722458	1.315799	2.785245	0.8751263	1468	RecB family exonuclease	L	conserved hypothetical protein	1.449659	3.062475	1.0453462	1343	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	 4.578021e-02	 1	1.791838e-02	 2.351307e-04	-2.319595e-02	-7.291456e-02	9.710492e-01	L	 1	 3	 TRUE	FALSE	-13	 TRUE	2.9321590	1.6745314	0.5480306	2.9469979	0.6329203	0.8313457	0.5005150	0.4416178	Y	1.4497162	0.8912321
13773	129	182121	182122	1	 -12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.449659	3.062475	1.0453462	1343	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	1.305472	2.923756	1.0007464	1518	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	 5.631536e-04	 1	2.078969e-02	 2.530381e-04	 7.776180e-02	-7.501727e-02	1.023156e+00	L	 3	 1	 TRUE	FALSE	-14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.4997441	0.4376225	Y	1.4497162	0.7118045
13773	129	182122	182123	1	 -19	Same	-	-	 2.856470	0	  2.856470	  2.85647021	1.305472	2.923756	1.0007464	1518	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	1.397765	3.022693	1.0203698	4343	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 5.285113e-02	 1	8.517898e-03	 7.825407e-03	 6.546491e-02	 4.108089e-01	2.397466e-01		 1	 2	 TRUE	FALSE	-15	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6329203	0.8555544	0.6390953	0.5661218	U	0.4686274	0.8518227
13773	129	182123	182124	1	  79	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.397765	3.022693	1.0203698	4343	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.619439	3.720184	1.1963161	640	Predicted transcriptional regulators	K	conserved hypothetical protein	 3.728161e-04	 1	4.913950e-02	-9.011979e-03	-2.022172e-02	-3.942140e-01	1.781190e+00		 2	 1	 TRUE	FALSE	-16	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.4205852	0.4110414	U	0.4686274	0.6162291
13773	129	182124	182125	1	 570	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.619439	3.720184	1.1963161	640	Predicted transcriptional regulators	K	conserved hypothetical protein	1.632783	3.676946	1.1125379	-	-	-	hypothetical protein	 0.000000e+00	 0	1.780461e-04	 3.048189e-02	 3.889814e-01	 8.179083e-01	4.953443e-04		 1	 0	FALSE	FALSE	-15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7894161	0.6533218	U	0.4686274	0.6162291
13773	129	182125	182126	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.632783	3.676946	1.1125379	-	-	-	hypothetical protein	1.476107	3.301347	1.1032503	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	2.454724e-02	 4.482902e-03	-8.851408e-03	 3.014456e-01	3.437937e-01		 0	 0	 TRUE	FALSE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5923650	0.5261944	U	0.4686274	0.6162291
13773	129	182126	182127	1	  -6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.476107	3.301347	1.1032503	-	-	-	conserved hypothetical protein	1.506704	3.223569	1.0976056	2254	Predicted HD superfamily hydrolase, possibly a nuclease	L	conserved hypothetical protein	 0.000000e+00	 0	9.361976e-04	 1.366980e-03	 4.293898e-02	 1.804125e-01	4.784107e-02		 0	 1	 TRUE	FALSE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5422309	0.6247981	U	0.4686274	0.6162291
13773	129	182127	182128	1	  83	Same	-	-	 2.079442	0	  2.079442	  2.07944154	1.506704	3.223569	1.0976056	2254	Predicted HD superfamily hydrolase, possibly a nuclease	L	conserved hypothetical protein	1.553015	3.398913	1.1434635	1203	Predicted helicases	R	helicase, probable	 7.158483e-02	 1	2.144637e-03	 5.620856e-03	 1.049145e-01	 4.138133e-01	4.293769e-02		 1	 1	 TRUE	FALSE	-18	 TRUE	2.9335626	1.6614134	0.5480306	2.9479804	0.6329203	0.9205230	0.6412688	0.6268270	U	0.4686274	0.8396881
13773	129	182128	182129	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.553015	3.398913	1.1434635	1203	Predicted helicases	R	helicase, probable	1.509604	3.324866	1.1235690	1688	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	hypothetical protein	 0.000000e+00	 0	1.884446e-03	 5.915561e-03	 7.228396e-02	 4.248252e-01	3.710724e-02		 1	 0	 TRUE	FALSE	-19	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6459945	0.6290639	U	0.4686274	0.6162291
13773	129	182129	182130	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.509604	3.324866	1.1235690	1688	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	hypothetical protein	1.462549	3.136345	1.0732647	1857	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	 0.000000e+00	 0	2.214190e-03	 6.494300e-04	 2.004174e-02	 1.148410e-01	1.284532e-01	L	 0	 5	 TRUE	FALSE	-20	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5210348	0.5984864	Y	1.4497162	0.7118045
13773	129	182130	182131	1	   4	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.462549	3.136345	1.0732647	1857	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein	1.558314	3.351615	1.0897868	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	9.170905e-03	 1.192853e-03	 6.340083e-02	 1.569859e-01	3.190559e-01		 5	 0	 TRUE	FALSE	-21	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5333489	0.5354147	U	0.4686274	0.6162291
13773	129	182131	182132	1	 410	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.558314	3.351615	1.0897868	-	-	-	conserved hypothetical protein	1.480920	3.383929	1.1112134	5551	Uncharacterized conserved protein	S	conserved within P. aerophilum	 0.000000e+00	 0	5.989849e-03	 3.157074e-03	 3.083312e-02	 2.868238e-01	1.568233e-01		 0	 0	 TRUE	FALSE	-22	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5876594	0.5907175	U	0.4686274	0.6162291
13773	129	182132	182133	1	 167	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.480920	3.383929	1.1112134	5551	Uncharacterized conserved protein	S	conserved within P. aerophilum	1.378884	3.002907	1.0619950	1672	Predicted ATPase (AAA+ superfamily)	R	hypothetical protein	 0.000000e+00	 0	1.041134e-02	-2.140977e-03	 6.842275e-03	-2.204135e-01	9.291599e-01		 0	 0	FALSE	FALSE	-21	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4592279	0.4450104	U	0.4686274	0.6162291
13773	129	182133	182134	1	  73	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.378884	3.002907	1.0619950	1672	Predicted ATPase (AAA+ superfamily)	R	hypothetical protein	1.328012	3.170488	1.0572086	-	-	-	hypothetical protein	 0.000000e+00	 0	2.587978e-03	 8.946220e-03	 1.506465e-01	 5.165658e-01	8.019807e-02		 0	 0	 TRUE	FALSE	-22	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6814941	0.6143382	U	0.4686274	0.6162291
13773	129	182134	182135	1	 138	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.328012	3.170488	1.0572086	-	-	-	hypothetical protein	1.353986	2.877765	1.0122579	152	Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase	F	phosphoribosylaminoimidazole-succinocarboxamide synthase (purC)	 0.000000e+00	 0	6.746476e-04	 1.201819e-02	 1.466942e-01	 6.594599e-01	1.433377e-02		 0	47	 TRUE	FALSE	-23	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7387371	0.6407068	U	0.4686274	0.6162291
13773	129	182135	182136	1	 115	Divergent	-	+	 4.969813	0	  4.969813	 -3.31949997	1.353986	2.877765	1.0122579	152	Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase	F	phosphoribosylaminoimidazole-succinocarboxamide synthase (purC)	1.312507	2.772512	0.9705074	151	Phosphoribosylamine-glycine ligase	F	phosphoribosylglycinamide synthetase (GARS) (purD)	 8.766562e-02	47	1.720458e-03	 1.352843e-02	 2.038057e-01	 6.901459e-01	2.572786e-02	F	47	60	 TRUE	FALSE	-24	FALSE	2.8267047	0.1886879	0.5480306	2.8904122	0.7720302	0.9730339	0.7500936	0.6351292	Y	1.4497162	0.5555994
13773	129	182136	182137	1	   3	Same	+	+	 2.856470	0	  5.519058	  5.51905803	1.312507	2.772512	0.9705074	151	Phosphoribosylamine-glycine ligase	F	phosphoribosylglycinamide synthetase (GARS) (purD)	1.356936	2.951262	1.0114079	34	Glutamine phosphoribosylpyrophosphate amidotransferase	F	amidophosphoribosyltransferase (purF)	 5.755097e-03	 2	1.973930e-03	 1.311864e-02	 1.477971e-01	 6.761043e-01	3.088746e-02	F	60	 2	FALSE	FALSE	-23	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.6838149	0.5508290	0.7452567	0.6324772	Y	1.4497162	0.9052318
13773	129	182137	182138	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.356936	2.951262	1.0114079	34	Glutamine phosphoribosylpyrophosphate amidotransferase	F	amidophosphoribosyltransferase (purF)	1.365619	2.886099	0.9803308	299	Folate-dependent phosphoribosylglycinamide formyltransferase PurN	F	phosphoribosylglycinamide formyltransferase	 6.217154e-03	 2	7.539466e-05	 8.101872e-03	 1.114929e-01	 5.110487e-01	2.264094e-03	F	 2	15	FALSE	FALSE	-22	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5596796	0.6778572	0.6496996	Y	1.4497162	0.7118045
13773	129	182138	182139	1	 -15	Same	+	+	 2.512306	0	  2.512306	 -0.08251681	1.365619	2.886099	0.9803308	299	Folate-dependent phosphoribosylglycinamide formyltransferase PurN	F	phosphoribosylglycinamide formyltransferase	1.340335	2.977437	1.0280686	190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	H	methylenetetrahydrofolate dehydrogenase (folD)	 2.000415e-04	15	6.392917e-04	 9.525816e-03	 1.447546e-01	 5.747307e-01	1.950985e-02	0	15	58	FALSE	FALSE	-21	 TRUE	2.9301853	0.2963655	0.5480306	2.9452541	0.7783720	0.4439192	0.7103530	0.6378952	N	0.5492530	0.4881223
13773	129	182139	182140	1	 -10	Same	+	+	 0.000000	0	  0.000000	 -9.68383689	1.340335	2.977437	1.0280686	190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	H	methylenetetrahydrofolate dehydrogenase (folD)	1.375830	2.975203	0.9883567	150	Phosphoribosylaminoimidazole (AIR) synthetase	F	phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (purM)	 3.597802e-03	50	1.259898e-03	 8.391825e-03	 1.020353e-01	 5.179593e-01	4.325634e-02	0	58	50	FALSE	FALSE	-20	 TRUE	0.4469764	0.1777640	0.5480306	0.4469764	0.7714403	0.5307060	0.6833319	0.6266433	N	0.5492530	0.5272819
13773	129	182140	182141	1	  -3	Convergent	+	-	 6.684612	0	 20.733018	 17.45284170	1.375830	2.975203	0.9883567	150	Phosphoribosylaminoimidazole (AIR) synthetase	F	phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (purM)	1.324389	2.818677	0.9765146	47	Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain	F	phosphoribosylformylglycinamidine synthase I (FGAM synthase I) (purQ)	 3.130325e-02	44	2.646207e-03	 9.596767e-03	 1.594082e-01	 5.514378e-01	6.848886e-02	F	50	44	FALSE	FALSE	-19	FALSE	2.7675554	1.8924311	0.5480306	2.5787748	0.7723149	0.7424686	0.6992622	0.6183298	Y	1.4497162	0.9169360
13773	129	182141	182142	1	  -3	Same	-	-	10.007811	0	 12.205035	 12.20503511	1.324389	2.818677	0.9765146	47	Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain	F	phosphoribosylformylglycinamidine synthase I (FGAM synthase I) (purQ)	1.325444	2.949341	1.0550618	1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component	F	conserved hypothetical protein	 1.163708e-02	 6	1.112408e-06	 1.599607e-02	 2.070907e-01	 7.802980e-01	9.423910e-06	F	44	 6	 TRUE	FALSE	-20	 TRUE	2.6790207	1.8677692	0.5480306	2.7025421	0.7537284	0.6099148	0.7786519	0.6557762	Y	1.4497162	0.9153654
13773	129	182142	182143	1	 145	Divergent	-	+	 5.649678	0	  8.312266	  8.10992562	1.325444	2.949341	1.0550618	1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component	F	conserved hypothetical protein	1.353628	2.974288	1.0474049	46	Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain	F	phosphoribosylformylglycinamidine synthase II (FGAM synthase II) (purL)	 1.283666e-02	 6	7.943656e-04	 1.231341e-02	 1.486972e-01	 6.659265e-01	1.603537e-02	F	 6	43	 TRUE	FALSE	-21	FALSE	2.7882442	1.8191823	0.5480306	2.7997445	0.7537284	0.6216452	0.7422032	0.6397376	Y	1.4497162	0.9093343
13773	129	182143	182144	1	   3	Same	+	+	30.029553	0	 55.127062	 52.60789189	1.353628	2.974288	1.0474049	46	Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain	F	phosphoribosylformylglycinamidine synthase II (FGAM synthase II) (purL)	1.353555	2.925816	0.9949158	34	Glutamine phosphoribosylpyrophosphate amidotransferase	F	amidophosphoribosyltransferase (purF)	 1.798730e-01	43	5.344589e-09	 9.565104e-03	 1.326119e-01	 5.708769e-01	5.889944e-07	F	43	61	FALSE	FALSE	-20	 TRUE	2.1535475	2.0412523	0.5480306	2.1827676	0.7726613	1.1178543	0.7083459	0.6559820	Y	1.4497162	0.9350612
13773	129	182144	182145	1	  39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.353555	2.925816	0.9949158	34	Glutamine phosphoribosylpyrophosphate amidotransferase	F	amidophosphoribosyltransferase (purF)	1.348020	3.038279	0.9862461	-	-	-	conserved within P. aerophilum, authentic frameshift	 0.000000e+00	 0	3.063419e-05	 1.011377e-02	 1.418189e-01	 5.981444e-01	1.246312e-03		61	 0	FALSE	FALSE	-19	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7197306	0.6515199	U	0.4686274	0.6162291
13773	129	182145	182146	1	 234	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.348020	3.038279	0.9862461	-	-	-	conserved within P. aerophilum, authentic frameshift	1.408992	3.076923	1.1179264	-	-	-	hypothetical protein	 0.000000e+00	 0	3.717519e-03	 4.383134e-03	 4.941523e-02	 2.550464e-01	2.198840e-01		 0	 0	FALSE	FALSE	-18	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5720545	0.5744992	U	0.4686274	0.6162291
13773	129	182146	182147	1	 135	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.408992	3.076923	1.1179264	-	-	-	hypothetical protein	1.257211	2.752588	0.9087780	-	-	-	paREP8	 0.000000e+00	 0	2.303730e-02	 8.233550e-03	 2.081970e-01	 3.173855e-01	4.386648e-01		 0	 1	 TRUE	FALSE	-19	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5984605	0.5058537	U	0.4686274	0.6162291
13773	129	182147	182148	1	 187	Convergent	+	-	 0.000000	0	  0.000000	 -0.05918887	1.257211	2.752588	0.9087780	-	-	-	paREP8	1.333547	2.875773	0.9267348	26	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	F	phosphoribosylaminoimidazole carboxylase ATPase subunit (AIRC) (purK)	 5.899547e-03	 1	5.827209e-03	 2.288345e-02	 2.278089e-01	 8.471171e-01	1.545757e-02		 1	48	FALSE	FALSE	-18	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.5540132	0.7941485	0.6400987	U	0.4686274	0.5589164
13773	129	182148	182149	1	 208	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.333547	2.875773	0.9267348	26	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	F	phosphoribosylaminoimidazole carboxylase ATPase subunit (AIRC) (purK)	1.527679	3.967124	1.1534253	-	-	-	hypothetical protein	 0.000000e+00	 0	3.768705e-02	-8.989962e-03	-1.048643e-01	-5.717875e-01	2.325449e+00		48	 0	 TRUE	FALSE	-19	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3963719	0.4049762	U	0.4686274	0.6162291
13773	129	182149	182150	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.527679	3.967124	1.1534253	-	-	-	hypothetical protein	1.588008	3.921728	1.1739482	-	-	-	hypothetical protein	 0.000000e+00	 0	3.639629e-03	 1.042183e-02	 1.752106e-01	 5.615861e-01	3.252722e-02		 0	 0	FALSE	FALSE	-18	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7039707	0.6313366	U	0.4686274	0.6162291
13773	129	182150	182151	1	 585	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.588008	3.921728	1.1739482	-	-	-	hypothetical protein	1.336773	2.842086	0.9797082	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	6.311887e-02	-1.565876e-02	-1.763826e-01	-7.165735e-01	2.866304e+00		 0	 0	 TRUE	FALSE	-19	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3858170	0.4013896	U	0.4686274	0.6162291
13773	129	182151	182152	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.336773	2.842086	0.9797082	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.299540	2.674963	1.0068584	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.386298e-03	 1.740523e-02	 2.494404e-01	 8.024843e-01	9.650084e-03		 0	 0	FALSE	FALSE	-18	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7870616	0.6430012	U	0.4686274	0.6162291
13773	129	182152	182153	1	 295	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.299540	2.674963	1.0068584	-	-	-	conserved within P. aerophilum	1.466266	3.184901	1.1025990	1002	Type II restriction enzyme, methylase subunits	V	hypothetical protein	 0.000000e+00	 0	2.779744e-02	-2.258535e-03	-6.366689e-02	-2.193215e-01	1.387803e+00		 0	 0	FALSE	FALSE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4595303	0.4201650	U	0.4686274	0.6162291
13773	129	182153	182154	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.466266	3.184901	1.1025990	1002	Type II restriction enzyme, methylase subunits	V	hypothetical protein	1.275699	2.796367	0.9475117	4930	Predicted ATP-dependent Lon-type protease	O	hypothetical protein	 0.000000e+00	 0	3.631585e-02	-2.613135e-03	 6.801289e-02	-2.257250e-01	1.453662e+00	0	 0	 0	FALSE	FALSE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4581621	0.4182159	N	0.5492530	0.6245624
13773	129	182154	182155	1	 442	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.275699	2.796367	0.9475117	4930	Predicted ATP-dependent Lon-type protease	O	hypothetical protein	1.410884	3.160823	1.0789136	433	Predicted ATPase	R	conserved hypothetical protein	 0.000000e+00	 0	1.827509e-02	 7.117106e-03	 2.972959e-02	 2.989736e-01	4.447856e-01		 0	 2	FALSE	FALSE	-15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5916151	0.5049034	U	0.4686274	0.6162291
13773	129	182155	182156	1	 -10	Same	-	-	 2.662588	0	  2.662588	  2.66258783	1.410884	3.160823	1.0789136	433	Predicted ATPase	R	conserved hypothetical protein	1.413087	3.094821	1.0538033	-	-	-	conserved hypothetical protein	 5.285113e-02	 1	4.852330e-06	 1.551710e-03	 3.843983e-02	 8.740677e-02	4.953443e-04		 2	 1	 TRUE	FALSE	-16	 TRUE	2.9244472	1.7076796	0.5480306	2.9399224	0.6329203	0.8555544	0.5177076	0.6533218	U	0.4686274	0.8476113
13773	129	182156	182157	1	 332	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413087	3.094821	1.0538033	-	-	-	conserved hypothetical protein	1.617235	3.619928	1.1417956	-	-	-	hypothetical protein	 0.000000e+00	 0	4.167646e-02	-6.352716e-03	 1.257954e-02	-2.539167e-01	1.384189e+00		 1	 0	 TRUE	FALSE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4513429	0.4204509	U	0.4686274	0.6162291
13773	129	182157	182158	1	 234	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.617235	3.619928	1.1417956	-	-	-	hypothetical protein	1.379935	3.032847	1.0164195	-	-	-	hypothetical protein	 0.000000e+00	 0	5.631132e-02	-1.185071e-02	-1.747028e-01	-5.201527e-01	2.175795e+00		 0	 0	 TRUE	FALSE	-18	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4027970	0.4061026	U	0.4686274	0.6162291
13773	129	182158	182159	1	 340	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.379935	3.032847	1.0164195	-	-	-	hypothetical protein	1.288153	2.853800	0.9544612	41	Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase	F	phosphoribosylaminoimidazole carboxylase catalytic subunit (AIRC) (purE)	 0.000000e+00	 0	8.423926e-03	 1.166472e-02	 2.118284e-01	 5.644687e-01	1.478382e-01		 0	36	 TRUE	FALSE	-19	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7043661	0.5936859	U	0.4686274	0.6162291
13773	129	182159	182160	1	  72	Same	-	-	 0.000000	0	  0.000000	 -1.45083288	1.288153	2.853800	0.9544612	41	Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase	F	phosphoribosylaminoimidazole carboxylase catalytic subunit (AIRC) (purE)	1.272919	2.702613	0.9679901	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase (mutT/nudix family protein)	-1.906483e-02	 8	2.320949e-04	 2.913407e-02	 3.746018e-01	 9.447423e-01	7.126832e-05		36	 8	 TRUE	FALSE	-20	 TRUE	0.4469764	0.2027982	0.5480306	0.4469764	0.7652913	0.5247025	0.8104626	0.6552829	U	0.4686274	0.5264121
13773	129	182160	182161	1	  94	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.272919	2.702613	0.9679901	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase (mutT/nudix family protein)	1.631059	3.686788	1.1453645	-	-	-	P. aerophilum family 562 protein, associated with P. aerophilum family 577, degenerate	 0.000000e+00	 0	1.282646e-01	-3.206579e-02	-3.531005e-01	-8.922983e-01	3.573057e+00		 8	 0	 TRUE	FALSE	-21	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3793751	0.3994070	U	0.4686274	0.6162291
13773	129	182161	182162	1	  -9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.631059	3.686788	1.1453645	-	-	-	P. aerophilum family 562 protein, associated with P. aerophilum family 577, degenerate	1.353443	2.967067	1.0157882	-	-	-	P. aerophilum family 577 protein, associated with P. aerophilum family 562, degenerate	 0.000000e+00	 0	7.707050e-02	-1.759823e-02	-2.426365e-01	-6.923729e-01	2.794003e+00		 0	 0	FALSE	FALSE	-20	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3884200	0.4018685	U	0.4686274	0.6162291
13773	129	182162	182163	1	 266	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.353443	2.967067	1.0157882	-	-	-	P. aerophilum family 577 protein, associated with P. aerophilum family 562, degenerate	1.559880	3.599496	1.0954440	-	-	-	hypothetical protein	 0.000000e+00	 0	4.261615e-02	-1.062628e-02	-9.798341e-02	-5.894762e-01	2.358334e+00		 0	 0	FALSE	FALSE	-19	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3956764	0.4043486	U	0.4686274	0.6162291
13773	129	182163	182164	1	  53	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.559880	3.599496	1.0954440	-	-	-	hypothetical protein	1.414217	3.110190	1.0697727	1350	Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB)	R	tryptophan synthase beta subunit (trpB), authentic frameshift	 0.000000e+00	 0	2.121772e-02	-4.033101e-03	-5.279743e-02	-2.090341e-01	1.095822e+00		 0	13	 TRUE	FALSE	-20	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4620625	0.4332060	U	0.4686274	0.6162291
13773	129	182164	182165	1	 240	Divergent	-	+	 0.000000	0	  0.000000	 -0.63586757	1.414217	3.110190	1.0697727	1350	Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB)	R	tryptophan synthase beta subunit (trpB), authentic frameshift	1.372650	3.074493	1.0230932	2263	Predicted RNA methylase	J	methylase, conjectural	 3.831673e-02	11	1.727815e-03	 2.927329e-03	 6.720118e-02	 1.721336e-01	1.385462e-01		13	11	 TRUE	FALSE	-21	FALSE	0.4469764	0.2282500	0.5480306	0.4469764	0.7764261	0.7937239	0.5386112	0.5961785	U	0.4686274	0.5344890
13773	129	182165	182166	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.372650	3.074493	1.0230932	2263	Predicted RNA methylase	J	methylase, conjectural	1.338412	2.967970	1.0435991	330	Membrane protease subunits, stomatin/prohibitin homologs	O	prohibitin homolog (hflK family)	 0.000000e+00	 0	1.172274e-03	 8.896465e-03	 1.414279e-01	 5.385323e-01	3.981602e-02	0	11	 0	FALSE	FALSE	-20	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6915680	0.6280980	N	0.5492530	0.6245624
13773	129	182166	182167	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.338412	2.967970	1.0435991	330	Membrane protease subunits, stomatin/prohibitin homologs	O	prohibitin homolog (hflK family)	1.391668	3.294362	1.1335269	-	-	-	hypothetical protein	 0.000000e+00	 0	2.836294e-03	 6.747744e-03	 7.627639e-02	 4.101875e-01	1.240899e-01		 0	 0	FALSE	FALSE	-19	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6384779	0.5996887	U	0.4686274	0.6162291
13773	129	182167	182168	1	  41	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.391668	3.294362	1.1335269	-	-	-	hypothetical protein	1.324458	2.916216	0.9997461	681	Signal peptidase I	U	signal peptidase	 0.000000e+00	 0	4.517209e-03	 7.581098e-03	 1.412371e-01	 4.311651e-01	1.562160e-01		 0	 3	FALSE	FALSE	-18	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6475907	0.5909581	U	0.4686274	0.6162291
13773	129	182168	182169	1	 554	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.324458	2.916216	0.9997461	681	Signal peptidase I	U	signal peptidase	1.501985	3.148664	1.0485193	-	-	-	hypothetical protein	 0.000000e+00	 0	3.151562e-02	-6.421847e-03	-8.876598e-02	-4.576045e-01	1.963870e+00		 3	 0	FALSE	FALSE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4108634	0.4085563	U	0.4686274	0.6162291
13773	129	182169	182170	1	 269	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.501985	3.148664	1.0485193	-	-	-	hypothetical protein	1.420660	2.958975	1.0166375	693	Putative intracellular protease/amidase	R	intracellular protease	 0.000000e+00	 0	6.613673e-03	-1.554823e-03	-1.543111e-03	-1.097297e-01	5.326871e-01		 0	33	FALSE	FALSE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4881512	0.4869405	U	0.4686274	0.6162291
13773	129	182170	182171	1	 149	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.420660	2.958975	1.0166375	693	Putative intracellular protease/amidase	R	intracellular protease	1.425365	3.666016	1.1801157	-	-	-	hypothetical protein	 0.000000e+00	 0	2.213331e-05	 7.999150e-04	 2.941238e-02	 3.608887e-02	1.717508e-03		33	 0	FALSE	FALSE	-15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177404	0.6507404	U	0.4686274	0.6162291
13773	129	182171	182172	1	  88	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.425365	3.666016	1.1801157	-	-	-	hypothetical protein	1.405682	3.075150	1.0609670	1131	ABC-type multidrug transport system, ATPase component	V	ABC-2 type transport system ATP-binding protein	 0.000000e+00	 0	3.874170e-04	 1.189772e-03	 3.823472e-02	 6.054038e-02	3.420938e-02		 0	39	 TRUE	FALSE	-16	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185284	0.6303843	U	0.4686274	0.6162291
13773	129	182172	182173	1	  -3	Same	+	+	29.381693	0	 40.241167	 39.29899416	1.405682	3.075150	1.0609670	1131	ABC-type multidrug transport system, ATPase component	V	ABC-2 type transport system ATP-binding protein	1.341828	3.199687	1.0975526	842	ABC-type multidrug transport system, permease component	V	membrane protein	-4.302557e-04	34	4.077255e-03	 5.008303e-03	 1.044751e-01	 2.928845e-01	2.198840e-01	V	39	34	FALSE	FALSE	-15	 TRUE	2.1699775	2.0129683	0.5480306	2.2852741	0.7748967	0.5247796	0.5903711	0.5744992	Y	1.4497162	0.9327106
13773	129	182173	182174	1	  28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.341828	3.199687	1.0975526	842	ABC-type multidrug transport system, permease component	V	membrane protein	1.348661	2.871389	0.9948434	2146	Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases	PR	Rieske iron sulfur protein, putative	 0.000000e+00	 0	4.668110e-05	 1.125578e-02	 1.486599e-01	 6.496596e-01	1.301089e-03		34	 0	FALSE	FALSE	-14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7365839	0.6513850	U	0.4686274	0.6162291
13773	129	182174	182175	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.348661	2.871389	0.9948434	2146	Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases	PR	Rieske iron sulfur protein, putative	1.468810	3.155015	1.0787608	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	1.443574e-02	-1.789261e-03	-2.621417e-02	-2.020357e-01	1.091007e+00		 0	 0	FALSE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4636660	0.4336700	U	0.4686274	0.6162291
13773	129	182175	182176	1	  67	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.468810	3.155015	1.0787608	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.289457	2.702952	0.8796424	605	Superoxide dismutase	P	superoxide dismutase (sod)	 0.000000e+00	 0	3.216725e-02	-2.820394e-03	 5.358435e-02	-2.474790e-01	1.492785e+00		 0	51	 TRUE	FALSE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4524862	0.4172295	U	0.4686274	0.6162291
13773	129	182176	182177	1	   6	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.289457	2.702952	0.8796424	605	Superoxide dismutase	P	superoxide dismutase (sod)	1.449946	3.274198	1.1307123	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.575664e-02	 2.342839e-04	-4.311152e-02	-8.002314e-02	1.099038e+00		51	 0	FALSE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4979540	0.4327437	U	0.4686274	0.6162291
13773	129	182177	182178	1	  48	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.449946	3.274198	1.1307123	-	-	-	conserved within P. aerophilum	1.301833	2.960068	1.0674942	-	-	-	hypothetical protein	 0.000000e+00	 0	2.193757e-02	 2.163795e-04	 8.006669e-02	-7.824202e-02	1.054444e+00		 0	 0	 TRUE	FALSE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4985931	0.4356615	U	0.4686274	0.6162291
13773	129	182178	182179	1	 381	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.301833	2.960068	1.0674942	-	-	-	hypothetical protein	1.468183	3.259917	1.1217777	-	-	-	hypothetical protein	 0.000000e+00	 0	2.767254e-02	-2.511192e-03	-6.471227e-02	-2.368994e-01	1.427869e+00		 0	 0	FALSE	FALSE	-13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4544155	0.4191329	U	0.4686274	0.6162291
13773	129	182179	182180	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.468183	3.259917	1.1217777	-	-	-	hypothetical protein	1.564555	3.489860	1.1215241	-	-	-	hypothetical protein	 0.000000e+00	 0	9.287418e-03	 1.900044e-03	 7.475750e-02	 1.985718e-01	2.919151e-01		 0	 0	 TRUE	FALSE	-14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5496485	0.5460473	U	0.4686274	0.6162291
13773	129	182180	182181	1	 457	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.564555	3.489860	1.1215241	-	-	-	hypothetical protein	1.468870	3.689200	1.1531029	-	-	-	P. aerophilum family 70 protein,	 0.000000e+00	 0	9.155624e-03	 1.977699e-03	 1.211726e-02	 2.046443e-01	2.836809e-01		 0	 0	 TRUE	FALSE	-15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5512857	0.5496363	U	0.4686274	0.6162291
13773	129	182181	182182	1	 -28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.468870	3.689200	1.1531029	-	-	-	P. aerophilum family 70 protein,	1.426247	3.206031	1.1410180	-	-	-	P. aerophilum family 68 protein	 0.000000e+00	 0	1.816663e-03	-4.394630e-04	 1.642944e-02	-4.088917e-02	1.736644e-01		 0	 0	 TRUE	FALSE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5088911	0.5866463	U	0.4686274	0.6162291
13773	129	182182	182183	1	 400	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.426247	3.206031	1.1410180	-	-	-	P. aerophilum family 68 protein	1.241425	2.571199	0.8605797	2835	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.415916e-02	 5.279758e-03	 1.928221e-01	 1.568834e-01	6.959375e-01		 0	 3	 TRUE	FALSE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5330784	0.4653071	U	0.4686274	0.6162291
13773	129	182183	182184	1	  70	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.241425	2.571199	0.8605797	2835	Uncharacterized conserved protein	S	conserved hypothetical protein	1.335959	3.045159	1.0548074	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 0.000000e+00	 0	8.936528e-03	 2.423747e-02	 2.260104e-01	 8.453424e-01	1.972483e-02		 3	 0	 TRUE	FALSE	-18	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7931996	0.6377141	U	0.4686274	0.6162291
13773	129	182184	182185	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.335959	3.045159	1.0548074	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.663753	3.536700	1.1368364	-	-	-	paREP2b	 0.000000e+00	 0	1.074492e-01	-2.451366e-02	-1.851982e-01	-8.028465e-01	3.219587e+00		 0	 0	 TRUE	FALSE	-19	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3827241	0.4003645	U	0.4686274	0.6162291
13773	129	182185	182186	1	 945	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.663753	3.536700	1.1368364	-	-	-	paREP2b	1.346805	3.469529	1.1256084	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.004563e-01	-2.221037e-02	-3.256971e-01	-7.543864e-01	3.037704e+00		 0	 0	 TRUE	FALSE	-20	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3848672	0.4009112	U	0.4686274	0.6162291
13773	129	182186	182187	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.346805	3.469529	1.1256084	-	-	-	conserved within P. aerophilum	1.728611	3.784987	1.1057463	535	Predicted Fe-S oxidoreductases	R	metallo cofactor biosynthesis protein, conjectural	 0.000000e+00	 0	1.457764e-01	-2.899379e-02	-1.508832e-01	-7.851024e-01	3.172937e+00		 0	 2	 TRUE	FALSE	-21	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3836776	0.4006378	U	0.4686274	0.6162291
13773	129	182187	182188	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.728611	3.784987	1.1057463	535	Predicted Fe-S oxidoreductases	R	metallo cofactor biosynthesis protein, conjectural	1.569314	3.465663	1.0367159	-	-	-	hypothetical protein	 0.000000e+00	 0	2.537574e-02	 3.268986e-02	 2.431078e-01	 7.873607e-01	3.170203e-02		 2	 0	 TRUE	FALSE	-22	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7814434	0.6317872	U	0.4686274	0.6162291
13773	129	182188	182189	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.569314	3.465663	1.0367159	-	-	-	hypothetical protein	1.797613	3.734510	1.0337825	-	-	-	hypothetical protein	 0.000000e+00	 0	5.212041e-02	 4.082655e-02	 7.671867e-01	 7.953698e-01	3.535439e-02		 0	 0	 TRUE	FALSE	-23	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7837787	0.6298812	U	0.4686274	0.6162291
13773	129	182189	182190	1	  31	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.797613	3.734510	1.0337825	-	-	-	hypothetical protein	1.518653	3.413084	1.1125429	-	-	-	P. aerophilum family 321 protein	 0.000000e+00	 0	7.781833e-02	 2.328691e-02	 9.711295e-05	 6.075530e-01	1.425743e-01		 0	 0	 TRUE	FALSE	-24	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7230470	0.5949759	U	0.4686274	0.6162291
13773	129	182190	182191	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.518653	3.413084	1.1125429	-	-	-	P. aerophilum family 321 protein	1.413417	3.353768	1.1497563	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein	 0.000000e+00	 0	1.107478e-02	-2.554306e-03	-1.695415e-02	-1.717714e-01	7.980262e-01		 0	 0	FALSE	FALSE	-23	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4725042	0.4555447	U	0.4686274	0.6162291
13773	129	182191	182192	1	 103	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.413417	3.353768	1.1497563	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein	1.664344	4.077084	1.2135068	-	-	-	hypothetical protein	 0.000000e+00	 0	6.296445e-02	-8.087091e-03	 3.768049e-02	-2.648590e-01	1.502177e+00		 0	 0	FALSE	FALSE	-22	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4488472	0.4169644	U	0.4686274	0.6162291
13773	129	182192	182193	1	 414	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.664344	4.077084	1.2135068	-	-	-	hypothetical protein	1.576487	2.957800	1.0503235	-	-	-	hypothetical protein	 0.000000e+00	 0	7.718861e-03	 2.663883e-02	 2.567840e-01	 7.749847e-01	1.584159e-02		 0	 0	 TRUE	FALSE	-23	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7749484	0.6399079	U	0.4686274	0.6162291
13773	129	182193	182194	1	 140	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.576487	2.957800	1.0503235	-	-	-	hypothetical protein	1.526426	3.342765	1.1044466	-	-	-	helix-turn-helix protein, conjectural	 0.000000e+00	 0	2.506031e-03	 9.386230e-03	 1.050422e-01	 5.384634e-01	2.647176e-02		 0	 0	FALSE	FALSE	-22	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6911884	0.6347546	U	0.4686274	0.6162291
13773	129	182194	182195	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.526426	3.342765	1.1044466	-	-	-	helix-turn-helix protein, conjectural	1.353259	3.048575	1.0744986	343	Queuine/archaeosine tRNA-ribosyltransferase	J	conserved hypothetical protein	 0.000000e+00	 0	2.998705e-02	-7.363352e-03	-5.519794e-02	-4.991374e-01	2.007126e+00		 0	 2	 TRUE	FALSE	-23	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4055116	0.4080068	U	0.4686274	0.6162291
13773	129	182195	182196	1	 116	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.353259	3.048575	1.0744986	343	Queuine/archaeosine tRNA-ribosyltransferase	J	conserved hypothetical protein	1.474432	2.995250	1.0029450	-	-	-	paREP2a	 0.000000e+00	 0	1.468287e-02	-2.260886e-03	-2.880556e-02	-2.349911e-01	1.142914e+00		 2	 0	 TRUE	FALSE	-24	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4550501	0.4307435	U	0.4686274	0.6162291
13773	129	182196	182197	1	  81	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.474432	2.995250	1.0029450	-	-	-	paREP2a	1.458822	3.134788	1.0787855	-	-	-	paREP2b	 0.000000e+00	 0	2.436636e-04	 1.711548e-04	 2.153111e-02	 5.103342e-02	2.081742e-02		 0	 0	 TRUE	FALSE	-25	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187862	0.6371410	U	0.4686274	0.6162291
13773	129	182197	182198	1	 228	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.458822	3.134788	1.0787855	-	-	-	paREP2b	1.422118	3.173101	1.0491304	-	-	-	hypothetical protein	 0.000000e+00	 0	1.347206e-03	-2.174863e-04	 2.023109e-02	-3.343132e-02	1.351395e-01		 0	 0	FALSE	FALSE	-24	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5110826	0.5970160	U	0.4686274	0.6162291
13773	129	182198	182199	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.422118	3.173101	1.0491304	-	-	-	hypothetical protein	1.400321	3.124632	1.0309817	-	-	-	paREP1	 0.000000e+00	 0	4.751086e-04	 1.495156e-03	 4.266701e-02	 8.490001e-02	4.683919e-02		 0	 0	FALSE	FALSE	-23	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176820	0.6252488	U	0.4686274	0.6162291
13773	129	182199	182200	1	  19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.400321	3.124632	1.0309817	-	-	-	paREP1	1.541226	3.441231	1.1696707	-	-	-	hypothetical protein	 0.000000e+00	 0	1.985431e-02	-4.587978e-03	-1.903646e-02	-3.016523e-01	1.297116e+00		 0	 0	 TRUE	FALSE	-24	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4398443	0.4240379	U	0.4686274	0.6162291
13773	129	182200	182201	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.541226	3.441231	1.1696707	-	-	-	hypothetical protein	1.396224	3.013035	1.0901031	-	-	-	hypothetical protein	 0.000000e+00	 0	2.102555e-02	-4.955986e-03	-4.997359e-02	-3.287237e-01	1.384189e+00		 0	 0	 TRUE	FALSE	-25	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4331939	0.4204509	U	0.4686274	0.6162291
13773	129	182201	182202	1	  42	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.396224	3.013035	1.0901031	-	-	-	hypothetical protein	1.234520	2.873357	0.9860914	640	Predicted transcriptional regulators	K	conserved hypothetical protein	 0.000000e+00	 0	2.614814e-02	 1.196462e-02	 2.723448e-01	 4.538349e-01	2.886073e-01		 0	 0	 TRUE	FALSE	-26	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6580607	0.5474398	U	0.4686274	0.6162291
13773	129	182202	182203	1	 216	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.234520	2.873357	0.9860914	640	Predicted transcriptional regulators	K	conserved hypothetical protein	1.525977	3.294887	1.1599664	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	8.494710e-02	-1.617527e-02	-2.737040e-01	-6.498611e-01	2.715034e+00		 0	 0	 TRUE	FALSE	-27	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3900692	0.4023480	U	0.4686274	0.6162291
13773	129	182203	182204	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.525977	3.294887	1.1599664	-	-	-	conserved within P. aerophilum	1.560109	3.485877	1.1296016	-	-	-	hypothetical protein	 0.000000e+00	 0	1.165007e-03	 8.108515e-03	 1.314330e-01	 5.093506e-01	1.564899e-02		 0	 0	 TRUE	FALSE	-28	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6760583	0.6400352	U	0.4686274	0.6162291
13773	129	182204	182205	1	  35	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.560109	3.485877	1.1296016	-	-	-	hypothetical protein	1.380429	2.941854	1.0070036	402	Cytosine deaminase and related metal-dependent hydrolases	FR	chlorohydrolase, conjectural	 0.000000e+00	 0	3.228504e-02	-7.714951e-03	-8.669405e-02	-4.519590e-01	1.847346e+00		 0	 0	 TRUE	FALSE	-29	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4119646	0.4103518	U	0.4686274	0.6162291
13773	129	182205	182206	1	 280	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.380429	2.941854	1.0070036	402	Cytosine deaminase and related metal-dependent hydrolases	FR	chlorohydrolase, conjectural	1.633383	3.486133	1.0582950	-	-	-	hypothetical protein	 0.000000e+00	 0	6.398582e-02	-1.291476e-02	-5.894439e-02	-5.316640e-01	2.239651e+00		 0	 0	FALSE	FALSE	-28	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4007451	0.4053969	U	0.4686274	0.6162291
13773	129	182206	182207	1	  -6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.633383	3.486133	1.0582950	-	-	-	hypothetical protein	1.604843	3.417790	1.0921328	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	8.145236e-04	 2.792644e-02	 3.229496e-01	 7.996058e-01	1.913643e-03		 0	 0	 TRUE	FALSE	-29	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7856528	0.6504429	U	0.4686274	0.6162291
13773	129	182207	182208	1	 119	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.604843	3.417790	1.0921328	-	-	-	conserved within P. aerophilum	1.377877	3.711398	1.1443552	-	-	-	hypothetical protein	 0.000000e+00	 0	5.151374e-02	-1.128107e-02	-1.572364e-01	-5.250343e-01	2.173531e+00		 0	 0	 TRUE	FALSE	-30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4016587	0.4062445	U	0.4686274	0.6162291
13773	129	182208	182209	1	  57	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.377877	3.711398	1.1443552	-	-	-	hypothetical protein	1.473586	3.524036	1.1500775	-	-	-	hypothetical protein	 0.000000e+00	 0	9.160268e-03	-1.631556e-03	-1.081319e-02	-1.814762e-01	8.159510e-01		 0	 0	 TRUE	FALSE	-31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4695547	0.4534446	U	0.4686274	0.6162291
13773	129	182209	182210	1	 469	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.473586	3.524036	1.1500775	-	-	-	hypothetical protein	1.466632	3.291776	1.1006073	1131	ABC-type multidrug transport system, ATPase component	V	ABC-2 type transport system ATP-binding protein	 0.000000e+00	 0	4.835269e-05	 3.382143e-04	 2.403117e-02	 7.129424e-02	4.255485e-03		 0	 3	 TRUE	FALSE	-32	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180376	0.6470653	U	0.4686274	0.6162291
13773	129	182210	182211	1	 -13	Same	+	+	 2.856470	0	  5.519058	  5.36698852	1.466632	3.291776	1.1006073	1131	ABC-type multidrug transport system, ATPase component	V	ABC-2 type transport system ATP-binding protein	1.373493	3.438268	1.1729468	842	ABC-type multidrug transport system, permease component	V	ABC-2 type transport system, membrane protein	 1.392617e-01	 3	8.675026e-03	-1.187166e-03	 2.167811e-02	-1.507519e-01	7.641148e-01	V	 3	 4	FALSE	FALSE	-31	 TRUE	2.8950318	1.7774688	0.5480306	2.8617306	0.7136133	1.0767792	0.4766485	0.4581595	Y	1.4497162	0.9037102
13773	129	182211	182212	1	 108	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.373493	3.438268	1.1729468	842	ABC-type multidrug transport system, permease component	V	ABC-2 type transport system, membrane protein	1.378311	2.964545	1.0125668	780	Enzyme related to GTP cyclohydrolase I	R	GTP cyclohydrolase I, conjectural	 0.000000e+00	 0	2.321343e-05	 5.693124e-03	 8.545595e-02	 3.803060e-01	1.717508e-03		 4	 0	FALSE	FALSE	-30	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6252960	0.6507404	U	0.4686274	0.6162291
13773	129	182212	182213	1	  41	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.378311	2.964545	1.0125668	780	Enzyme related to GTP cyclohydrolase I	R	GTP cyclohydrolase I, conjectural	1.443530	3.111477	1.0882815	366	Glycosidases	G	hypothetical protein	 0.000000e+00	 0	4.253620e-03	 5.746045e-04	 1.404957e-02	-1.235651e-02	3.807354e-01		 0	 1	 TRUE	FALSE	-31	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176872	0.5167658	U	0.4686274	0.6162291
13773	129	182213	182214	1	   6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.443530	3.111477	1.0882815	366	Glycosidases	G	hypothetical protein	1.409223	3.062784	1.0747422	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	 0.000000e+00	 0	1.176981e-03	 3.315558e-04	 2.897329e-02	-6.631488e-03	1.161120e-01	0	 1	 0	FALSE	FALSE	-30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5194416	0.6016448	N	0.5492530	0.6245624
13773	129	182214	182215	1	  -6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.409223	3.062784	1.0747422	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	1.371447	2.987636	1.0486565	44	Dihydroorotase and related cyclic amidohydrolases	F	dihydroorotase (pyrC)	 0.000000e+00	 0	1.427072e-03	 3.371298e-03	 7.187092e-02	 2.085235e-01	1.099205e-01	0	 0	56	FALSE	FALSE	-29	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5532978	0.6030494	N	0.5492530	0.6245624
13773	129	182215	182216	1	  41	Convergent	+	-	 0.000000	0	  0.000000	 -0.27443685	1.371447	2.987636	1.0486565	44	Dihydroorotase and related cyclic amidohydrolases	F	dihydroorotase (pyrC)	1.504933	3.731539	1.2325215	370	Fe2+ transport system protein B	P	iron (II) transporter (feoB-2) part 1, conjectural, authentic frameshift	 1.157192e-02	 3	1.781856e-02	-4.280318e-03	-3.826041e-02	-3.505394e-01	1.415059e+00	0	56	 3	FALSE	FALSE	-28	FALSE	0.4469764	0.2578620	0.5480306	0.4469764	0.7136133	0.6089544	0.4278252	0.4195054	N	0.5492530	0.5526269
13773	129	182216	182217	1	  45	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.504933	3.731539	1.2325215	370	Fe2+ transport system protein B	P	iron (II) transporter (feoB-2) part 1, conjectural, authentic frameshift	1.424185	3.131784	1.0809630	370	Fe2+ transport system protein B	P	iron (II) transporter (feoB-2) part 2, conjectural, authentic frameshift	 0.000000e+00	 0	6.520171e-03	-1.456694e-03	-1.694084e-03	-9.867953e-02	5.204355e-01	P	 3	 0	 TRUE	FALSE	-29	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4919440	0.4892985	Y	1.4497162	0.7118045
13773	129	182217	182218	1	 270	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.424185	3.131784	1.0809630	370	Fe2+ transport system protein B	P	iron (II) transporter (feoB-2) part 2, conjectural, authentic frameshift	1.501808	3.371736	1.1388806	3839	ABC-type sugar transport systems, ATPase components	G	thiamine transport ATP-binding protein	 0.000000e+00	 0	6.025308e-03	-1.371678e-03	 9.274432e-03	-9.473798e-02	4.898926e-01	0	 0	 0	 TRUE	FALSE	-30	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4937993	0.4941753	N	0.5492530	0.6245624
13773	129	182218	182219	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.501808	3.371736	1.1388806	3839	ABC-type sugar transport systems, ATPase components	G	thiamine transport ATP-binding protein	1.392549	3.461761	1.2070745	1178	ABC-type Fe3+ transport system, permease component	P	conserved hypothetical protein	 0.000000e+00	 0	1.193766e-02	-2.966652e-03	-1.161046e-02	-2.473494e-01	9.908117e-01	0	 0	 1	FALSE	FALSE	-29	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4526485	0.4400938	N	0.5492530	0.6245624
13773	129	182219	182220	1	 112	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.392549	3.461761	1.2070745	1178	ABC-type Fe3+ transport system, permease component	P	conserved hypothetical protein	1.406052	3.152907	1.0675745	4143	ABC-type thiamine transport system, periplasmic component	H	thiamine-binding periplasmic protein	 1.352502e-03	 1	1.823367e-04	 2.668068e-03	 4.836081e-02	 1.679624e-01	1.642646e-02	0	 1	 7	 TRUE	FALSE	-30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4789292	0.5380449	0.6394805	N	0.5492530	0.6245624
13773	129	182220	182221	1	 113	Same	-	-	 0.000000	0	  0.000000	 -3.11918074	1.406052	3.152907	1.0675745	4143	ABC-type thiamine transport system, periplasmic component	H	thiamine-binding periplasmic protein	1.352298	2.940505	1.0333425	480	Translation elongation factors (GTPases)	J	translation elongation factor aEF-2	 4.074972e-04	 7	2.889475e-03	 4.493076e-03	 9.298873e-02	 2.683629e-01	1.717508e-01	0	 7	61	 TRUE	FALSE	-31	 TRUE	0.4469764	0.1892484	0.5480306	0.4469764	0.7596462	0.4531085	0.5778579	0.5873404	N	0.5492530	0.5309276
13773	129	182221	182222	1	  48	Same	-	-	 0.000000	0	  0.000000	 -2.96231719	1.352298	2.940505	1.0333425	480	Translation elongation factors (GTPases)	J	translation elongation factor aEF-2	1.371788	2.918466	1.0510956	422	Thiamine biosynthesis protein ThiC	H	thiamine biosynthesis protein (thiC)	 3.077095e-03	28	3.798669e-04	 7.888433e-03	 1.041266e-01	 4.944455e-01	1.415059e-02	0	61	28	 TRUE	FALSE	-32	 TRUE	0.4469764	0.1903649	0.5480306	0.4469764	0.7759129	0.5152567	0.6707372	0.6408729	N	0.5492530	0.5312819
13773	129	182222	182223	1	 148	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.371788	2.918466	1.0510956	422	Thiamine biosynthesis protein ThiC	H	thiamine biosynthesis protein (thiC)	1.322501	3.110858	1.0554832	-	-	-	hypothetical protein	 0.000000e+00	 0	2.429214e-03	 1.026041e-02	 1.668017e-01	 5.742907e-01	5.881463e-02		28	 0	 TRUE	FALSE	-33	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7099507	0.6209502	U	0.4686274	0.6162291
13773	129	182223	182224	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.322501	3.110858	1.0554832	-	-	-	hypothetical protein	1.493534	3.424200	1.1112714	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 0.000000e+00	 0	2.925215e-02	-5.431600e-03	-8.044946e-02	-4.078692e-01	1.816185e+00		 0	 1	 TRUE	 TRUE	-32	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4180357	0.4105042	U	0.4686274	0.6162291
13773	129	182224	182225	1	  35	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.493534	3.424200	1.1112714	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.476605	3.353997	1.0626622	-	-	-	hypothetical protein	 0.000000e+00	 0	2.865628e-04	 1.062478e-03	 3.026501e-02	 1.521585e-01	1.623033e-02		 1	 0	 TRUE	 TRUE	-31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5310658	0.6396093	U	0.4686274	0.6162291
13773	129	182225	182226	1	 110	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.476605	3.353997	1.0626622	-	-	-	hypothetical protein	1.462036	3.265655	1.1182808	2073	Cobalamin biosynthesis protein CbiG	H	cobalamin biosynthesis protein G (cbiG)	 0.000000e+00	 0	2.122741e-04	 2.683367e-04	 2.254851e-02	 6.666474e-02	1.702194e-02		 0	 5	 TRUE	 TRUE	-30	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182033	0.6393080	U	0.4686274	0.6162291
13773	129	182226	182227	1	 -13	Same	-	-	 2.856470	0	  5.519058	  5.50103953	1.462036	3.265655	1.1182808	2073	Cobalamin biosynthesis protein CbiG	H	cobalamin biosynthesis protein G (cbiG)	1.517538	3.393530	1.0988521	2241	Precorrin-6B methylase 1	H	cobalamin biosynthesis precorrin-6Y methylase (cbiE)	 5.466718e-02	 5	3.080541e-03	 7.039849e-04	 3.979218e-02	 1.219101e-01	1.642022e-01	H	 5	 8	FALSE	 TRUE	-31	 TRUE	2.8950318	1.7833824	0.5480306	2.8617306	0.7448207	0.8664027	0.5224030	0.5889325	Y	1.4497162	0.9043638
13773	129	182227	182228	1	  93	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.517538	3.393530	1.0988521	2241	Precorrin-6B methylase 1	H	cobalamin biosynthesis precorrin-6Y methylase (cbiE)	1.457043	3.541714	1.1477174	-	-	-	hypothetical protein	 0.000000e+00	 0	3.659652e-03	 3.737570e-04	 1.407789e-02	 9.026928e-02	2.092202e-01		 8	 0	FALSE	 TRUE	-32	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178258	0.5762640	U	0.4686274	0.6162291
13773	129	182228	182229	1	  41	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.457043	3.541714	1.1477174	-	-	-	hypothetical protein	1.405229	3.466357	1.1312410	-	-	-	hypothetical protein	 0.000000e+00	 0	2.684742e-03	-2.608505e-04	 2.301865e-02	-5.370451e-02	2.596853e-01		 0	 0	 TRUE	 TRUE	-31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5056379	0.5580942	U	0.4686274	0.6162291
13773	129	182229	182230	1	 -12	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405229	3.466357	1.1312410	-	-	-	hypothetical protein	1.526346	3.344988	1.1320033	2082	Precorrin isomerase	H	cobalamin biosynthesis putative precorrin-8X methylmutase (precorrin isomerase)	 0.000000e+00	 0	1.466938e-02	-3.460139e-03	-1.086428e-02	-2.366874e-01	1.034053e+00		 0	 2	 TRUE	 TRUE	-30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4545745	0.4366685	U	0.4686274	0.6162291
13773	129	182230	182231	1	 -10	Same	+	+	 2.856470	0	  5.519058	  5.51905803	1.526346	3.344988	1.1320033	2082	Precorrin isomerase	H	cobalamin biosynthesis putative precorrin-8X methylmutase (precorrin isomerase)	1.568320	3.456339	1.1454439	1010	Precorrin-3B methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)	 3.639057e-02	 2	1.761831e-03	 8.764089e-03	 1.436632e-01	 5.247410e-01	2.059655e-02	H	 2	20	 TRUE	 TRUE	-29	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.6838149	0.7784366	0.6859261	0.6372565	Y	1.4497162	0.9052318
13773	129	182231	182232	1	  -3	Same	+	+	11.567035	0	 19.410157	 19.39213844	1.568320	3.456339	1.1454439	1010	Precorrin-3B methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)	1.408499	3.050689	1.0536403	1903	Cobalamin biosynthesis protein CbiD	H	cobalamin biosynthesis protein D (cbiD)	 6.865623e-02	12	2.554284e-02	-5.015468e-03	-6.795238e-02	-2.620636e-01	1.271027e+00	H	20	12	 TRUE	 TRUE	-28	 TRUE	2.6171082	1.9131714	0.5480306	2.6057102	0.7776747	0.9097341	0.4493515	0.4254077	Y	1.4497162	0.9203054
13773	129	182232	182233	1	  -3	Same	+	+	10.650744	0	 17.107572	 17.04873136	1.408499	3.050689	1.0536403	1903	Cobalamin biosynthesis protein CbiD	H	cobalamin biosynthesis protein D (cbiD)	1.448956	3.277642	1.1292017	2242	Precorrin-6B methylase 2	H	cobalamin biosynthesis precorrin-8W decarboxylase (cbiT)	 9.667394e-02	12	1.636749e-03	 1.045365e-04	 1.730264e-02	-2.389256e-02	1.604916e-01	H	12	16	 TRUE	 TRUE	-27	 TRUE	2.6560654	1.8903666	0.5480306	2.6465219	0.7776747	1.0018434	0.5141330	0.5898600	Y	1.4497162	0.9177845
13773	129	182233	182234	1	  -7	Same	+	+	14.091162	0	 23.087621	 22.65837586	1.448956	3.277642	1.1292017	2242	Precorrin-6B methylase 2	H	cobalamin biosynthesis precorrin-8W decarboxylase (cbiT)	1.472419	3.360879	1.1134450	2243	Precorrin-2 methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)	 7.274937e-02	16	5.505107e-04	-5.124210e-05	 2.124615e-02	 2.092697e-02	4.584791e-02	H	16	21	 TRUE	 TRUE	-26	 TRUE	2.5860702	1.9319849	0.5480306	2.5391984	0.7783446	0.9280743	0.5175976	0.6256408	Y	1.4497162	0.9223220
13773	129	182234	182235	1	 -15	Same	+	+	28.581401	0	 38.247477	 37.95393937	1.472419	3.360879	1.1134450	2243	Precorrin-2 methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)	1.296201	2.809936	0.9893070	2875	Precorrin-4 methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)	 1.957413e-01	21	3.105261e-02	-3.263039e-03	 4.262531e-02	-2.733723e-01	1.536230e+00	H	21	32	 TRUE	 TRUE	-25	 TRUE	2.1781197	2.0108049	0.5480306	2.3077761	0.7775415	1.1384430	0.4466323	0.4159632	Y	1.4497162	0.9324739
13773	129	182235	182236	1	 917	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.296201	2.809936	0.9893070	2875	Precorrin-4 methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)	1.546247	3.560338	1.0707511	-	-	-	hypothetical protein	 0.000000e+00	 0	6.252295e-02	-1.472059e-02	-1.896934e-01	-6.987806e-01	2.842963e+00		32	 0	 TRUE	 TRUE	-24	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3872385	0.4015948	U	0.4686274	0.6162291
13773	129	182236	182237	1	 112	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.546247	3.560338	1.0707511	-	-	-	hypothetical protein	1.539640	3.910282	1.1929423	-	-	-	hypothetical protein	 0.000000e+00	 0	4.365476e-05	 8.370610e-03	 1.155370e-01	 5.225370e-01	4.617716e-04		 0	 0	FALSE	 TRUE	-25	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6851824	0.6534780	U	0.4686274	0.6162291
13773	129	182237	182238	1	 309	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.539640	3.910282	1.1929423	-	-	-	hypothetical protein	1.448568	3.121507	1.0566470	5493	Uncharacterized conserved protein containing a coiled-coil domain	S	conserved hypothetical protein	 0.000000e+00	 0	8.294095e-03	-2.492845e-04	-1.933292e-03	 4.864623e-02	4.146055e-01		 0	 0	 TRUE	 TRUE	-24	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187590	0.5098051	U	0.4686274	0.6162291
13773	129	182238	182239	1	 432	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.448568	3.121507	1.0566470	5493	Uncharacterized conserved protein containing a coiled-coil domain	S	conserved hypothetical protein	1.467752	3.194031	1.0720453	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	3.680404e-04	-4.621318e-05	 2.085675e-02	 1.677456e-02	3.142933e-02		 0	 0	FALSE	 TRUE	-25	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179979	0.6319821	U	0.4686274	0.6162291
13773	129	182239	182240	1	 324	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.467752	3.194031	1.0720453	-	-	-	P. aerophilum family 1964 protein	1.437078	3.203928	1.0837394	3842	ABC-type spermidine/putrescine transport systems, ATPase components	E	ABC transporter, ATP-binding protein	 0.000000e+00	 0	9.409300e-04	-2.341875e-04	 1.784024e-02	-1.074326e-02	8.371319e-02		 0	 1	FALSE	 TRUE	-26	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182978	0.6128672	U	0.4686274	0.6162291
13773	129	182240	182241	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.437078	3.203928	1.0837394	3842	ABC-type spermidine/putrescine transport systems, ATPase components	E	ABC transporter, ATP-binding protein	1.504789	3.152817	1.0542587	-	-	-	paREP2b	 0.000000e+00	 0	4.584744e-03	-7.643619e-04	 1.852055e-02	-2.346730e-02	3.366315e-01		 1	 0	FALSE	 TRUE	-27	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5142003	0.5289643	U	0.4686274	0.6162291
13773	129	182241	182242	1	 111	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.504789	3.152817	1.0542587	-	-	-	paREP2b	1.221381	2.516647	1.0124477	-	-	-	paREP2a	 0.000000e+00	 0	8.032007e-02	-1.228166e-02	 4.251016e-03	-5.356309e-01	2.355978e+00		 0	 0	FALSE	 TRUE	-28	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4000583	0.4044182	U	0.4686274	0.6162291
13773	129	182242	182243	1	  39	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.221381	2.516647	1.0124477	-	-	-	paREP2a	1.463632	3.691602	1.2424555	609	ABC-type Fe3+-siderophore transport system, permease component	P	iron (III) dicitrate transport system, permease protein, putative	 0.000000e+00	 0	5.868580e-02	-2.815179e-03	-1.461521e-01	-2.099612e-01	1.461074e+00		 0	40	 TRUE	 TRUE	-27	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4617680	0.4180349	U	0.4686274	0.6162291
13773	129	182243	182244	1	  -3	Same	-	-	 2.079442	0	  2.079442	  1.90954250	1.463632	3.691602	1.2424555	609	ABC-type Fe3+-siderophore transport system, permease component	P	iron (III) dicitrate transport system, permease protein, putative	1.400658	3.141147	1.0986745	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	conserved hypothetical protein	 5.325482e-03	 4	3.965679e-03	-6.209511e-04	 1.963358e-02	-8.682484e-02	3.883499e-01	P	40	 4	FALSE	 TRUE	-28	 TRUE	2.9335626	1.6511628	0.5480306	2.9479804	0.7323301	0.5465141	0.4962434	0.5144469	Y	1.4497162	0.8882948
13773	129	182244	182245	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.400658	3.141147	1.0986745	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	conserved hypothetical protein	1.378782	3.018022	1.0657840	612	Predicted Zn-dependent peptidases	R	protease	 0.000000e+00	 0	4.785895e-04	 3.683877e-03	 7.066320e-02	 2.446306e-01	3.225098e-02		 4	 0	FALSE	 TRUE	-29	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5678479	0.6314500	U	0.4686274	0.6162291
13773	129	182245	182246	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.378782	3.018022	1.0657840	612	Predicted Zn-dependent peptidases	R	protease	1.400355	3.027440	1.0162877	1475	Predicted transcriptional regulators	K	paREP1	 0.000000e+00	 0	4.654111e-04	 3.705900e-03	 5.729392e-02	 2.473588e-01	3.061829e-02		 0	 0	FALSE	 TRUE	-30	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5682590	0.6326945	U	0.4686274	0.6162291
13773	129	182246	182247	1	 331	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.400355	3.027440	1.0162877	1475	Predicted transcriptional regulators	K	paREP1	1.327839	2.844393	1.0072554	2109	ATP:corrinoid adenosyltransferase	H	cob(I)alamin adenosyltransferase	 0.000000e+00	 0	5.258610e-03	 6.305907e-03	 1.266202e-01	 3.652708e-01	2.092202e-01	0	 0	26	 TRUE	 TRUE	-29	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6175701	0.5762640	N	0.5492530	0.6245624
13773	129	182247	182248	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.327839	2.844393	1.0072554	2109	ATP:corrinoid adenosyltransferase	H	cob(I)alamin adenosyltransferase	1.345382	3.023100	1.0461985	1267	Phosphatidylglycerophosphatase A and related proteins	I	conserved hypothetical protein	 1.190151e-02	 2	3.077495e-04	 1.309810e-02	 1.636572e-01	 7.070407e-01	4.458099e-03	0	26	 2	FALSE	 TRUE	-30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.6132969	0.7558692	0.6467962	N	0.5492530	0.6245624
13773	129	182248	182249	1	 -10	Same	-	-	 2.079442	0	  2.079442	  2.01881692	1.345382	3.023100	1.0461985	1267	Phosphatidylglycerophosphatase A and related proteins	I	conserved hypothetical protein	1.462729	3.282381	1.1304335	2038	NaMN:DMB phosphoribosyltransferase	H	conserved hypothetical protein	 4.465466e-02	 2	1.377038e-02	-1.201751e-03	-2.152711e-02	-1.662166e-01	1.027819e+00	0	 2	15	FALSE	 TRUE	-31	 TRUE	2.9335626	1.6548846	0.5480306	2.9479804	0.6838149	0.8246830	0.4731627	0.4370851	N	0.5492530	0.8432983
13773	129	182249	182250	1	 248	Divergent	-	+	 0.000000	0	  0.000000	 -0.24283734	1.462729	3.282381	1.1304335	2038	NaMN:DMB phosphoribosyltransferase	H	conserved hypothetical protein	1.399430	3.037518	1.0139771	2102	Predicted ATPases of PP-loop superfamily	R	conserved hypothetical protein	 4.465466e-02	 2	4.006726e-03	-5.890526e-04	 2.038094e-02	-8.808058e-02	4.018567e-01		15	 2	FALSE	 TRUE	-32	FALSE	0.4469764	0.2674215	0.5480306	0.4469764	0.6838149	0.8246830	0.4959484	0.5122596	U	0.4686274	0.5468830
13773	129	182250	182251	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.399430	3.037518	1.0139771	2102	Predicted ATPases of PP-loop superfamily	R	conserved hypothetical protein	1.431573	3.224095	1.0774819	367	Asparagine synthase (glutamine-hydrolyzing)	E	asparagine synthetase (asnB)	 7.508473e-04	 2	1.033133e-03	 1.029911e-03	 2.692036e-02	 4.141102e-02	1.099205e-01		 2	 2	 TRUE	 TRUE	-31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4618072	0.5182916	0.6030494	U	0.4686274	0.6162291
13773	129	182251	182252	1	 -55	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.431573	3.224095	1.0774819	367	Asparagine synthase (glutamine-hydrolyzing)	E	asparagine synthetase (asnB)	1.471153	3.247761	1.1109617	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	cobC aminotransferase, conjectural	 6.839682e-03	 2	1.566623e-03	-3.916549e-04	 1.615233e-02	-2.679100e-02	1.396912e-01	E	 2	14	 TRUE	 TRUE	-30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5692508	0.5131308	0.5958874	Y	1.4497162	0.7118045
13773	129	182252	182253	1	 -13	Same	+	+	 0.000000	0	  0.000000	 -0.07410797	1.471153	3.247761	1.1109617	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	cobC aminotransferase, conjectural	1.468144	3.558645	1.2286191	368	Cobalamin-5-phosphate synthase	H	cobalamin (5'-phosphate) synthase (cobS)	 2.290293e-02	 1	9.055257e-06	 3.310091e-04	 2.432892e-02	 6.910377e-02	7.633367e-04	0	14	 1	 TRUE	 TRUE	-29	 TRUE	0.4469764	0.2976889	0.5480306	0.4469764	0.6329203	0.6966823	0.5181385	0.6522016	N	0.5492530	0.5651364
13773	129	182253	182254	1	 -25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.468144	3.558645	1.2286191	368	Cobalamin-5-phosphate synthase	H	cobalamin (5'-phosphate) synthase (cobS)	1.471274	3.561700	1.2055844	1270	Cobalamin biosynthesis protein CobD/CbiB	H	cobalamin biosynthesis protein B (cbiB)	 0.000000e+00	 0	9.797626e-06	 3.330346e-04	 2.492281e-02	 6.929519e-02	8.063333e-04	H	 1	 0	 TRUE	 TRUE	-28	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181256	0.6521082	Y	1.4497162	0.7118045
13773	129	182254	182255	1	 412	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.471274	3.561700	1.2055844	1270	Cobalamin biosynthesis protein CobD/CbiB	H	cobalamin biosynthesis protein B (cbiB)	1.250126	2.673319	1.0264816	-	-	-	paREP4	 0.000000e+00	 0	4.890663e-02	-4.001449e-03	 7.581947e-02	-2.744090e-01	1.601594e+00		 0	 0	 TRUE	 TRUE	-27	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4462869	0.4147331	U	0.4686274	0.6162291
13773	129	182255	182256	1	  22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.250126	2.673319	1.0264816	-	-	-	paREP4	1.308939	2.982302	1.0537593	640	Predicted transcriptional regulators	K	metal ion binding transcriptional regulator, conjectural	 0.000000e+00	 0	3.458988e-03	 2.867131e-02	 3.046337e-01	 9.149492e-01	3.769564e-03		 0	 2	 TRUE	 TRUE	-26	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8065938	0.6475210	U	0.4686274	0.6162291
13773	129	182256	182257	1	  38	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.308939	2.982302	1.0537593	640	Predicted transcriptional regulators	K	metal ion binding transcriptional regulator, conjectural	1.557097	3.247890	1.0242760	-	-	-	hypothetical protein	 0.000000e+00	 0	6.158267e-02	-1.505804e-02	-1.784846e-01	-7.102053e-01	2.866304e+00		 2	 0	 TRUE	 TRUE	-25	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3862913	0.4013896	U	0.4686274	0.6162291
13773	129	182257	182258	1	  53	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.557097	3.247890	1.0242760	-	-	-	hypothetical protein	1.363677	2.905040	0.9913397	2041	Sulfite oxidase and related enzymes	R	sulfite oxidase, conjectural	 0.000000e+00	 0	3.741161e-02	-9.272007e-03	-9.650896e-02	-5.401562e-01	2.164489e+00		 0	11	FALSE	 TRUE	-26	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3993701	0.4064935	U	0.4686274	0.6162291
13773	129	182258	182259	1	 173	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.363677	2.905040	0.9913397	2041	Sulfite oxidase and related enzymes	R	sulfite oxidase, conjectural	1.852573	4.134321	1.1736360	-	-	-	paREP1, degenerate	 0.000000e+00	 0	2.390202e-01	-3.519006e-02	-1.530090e-03	-7.018245e-01	2.892349e+00		11	 0	FALSE	 TRUE	-27	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3870019	0.4012529	U	0.4686274	0.6162291
13773	129	182259	182260	1	 301	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.852573	4.134321	1.1736360	-	-	-	paREP1, degenerate	1.562327	3.395231	1.0694367	-	-	-	conserved protein, degenerate	 0.000000e+00	 0	8.424302e-02	 4.450464e-02	 1.636270e-01	 7.805695e-01	4.519295e-02		 0	 0	FALSE	 TRUE	-28	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7791163	0.6259433	U	0.4686274	0.6162291
13773	129	182260	182261	1	 -24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.562327	3.395231	1.0694367	-	-	-	conserved protein, degenerate	1.413053	3.176271	1.0744540	-	-	-	paREP6	 0.000000e+00	 0	2.228279e-02	-4.253219e-03	-5.651136e-02	-2.237071e-01	1.142914e+00		 0	 0	 TRUE	 TRUE	-27	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4584678	0.4307435	U	0.4686274	0.6162291
13773	129	182261	182262	1	 109	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.413053	3.176271	1.0744540	-	-	-	paREP6	1.371771	2.752137	0.9510669	-	-	-	hypothetical protein	 0.000000e+00	 0	1.704189e-03	 3.052704e-03	 6.879736e-02	 1.847063e-01	1.306631e-01		 0	 0	 TRUE	 TRUE	-26	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5438720	0.5980793	U	0.4686274	0.6162291
13773	129	182262	182263	1	  -6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.371771	2.752137	0.9510669	-	-	-	hypothetical protein	1.409269	2.989984	1.0334624	-	-	-	hypothetical protein	 0.000000e+00	 0	1.406074e-03	 3.354007e-03	 4.836034e-02	 2.065533e-01	1.073908e-01		 0	 0	 TRUE	 TRUE	-25	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5519505	0.6039545	U	0.4686274	0.6162291
13773	129	182263	182264	1	  21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.409269	2.989984	1.0334624	-	-	-	hypothetical protein	1.551629	3.382767	1.0859244	-	-	-	hypothetical protein	 0.000000e+00	 0	2.026641e-02	-4.222359e-03	-7.622482e-03	-2.384061e-01	1.136359e+00		 0	 0	 TRUE	 TRUE	-24	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4540966	0.4313682	U	0.4686274	0.6162291
13773	129	182264	182265	1	 548	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.551629	3.382767	1.0859244	-	-	-	hypothetical protein	1.397574	3.405507	1.1496118	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.373281e-02	-5.394562e-03	-6.049656e-02	-3.318200e-01	1.418713e+00		 0	 0	 TRUE	 TRUE	-23	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4320181	0.4194119	U	0.4686274	0.6162291
13773	129	182265	182266	1	 203	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.397574	3.405507	1.1496118	-	-	-	conserved within P. aerophilum	1.659595	3.821605	1.1781356	-	-	-	hypothetical protein	 0.000000e+00	 0	6.865472e-02	-1.120514e-02	-7.548848e-03	-4.170770e-01	1.912585e+00		 0	 0	 TRUE	 TRUE	-22	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4161024	0.4095588	U	0.4686274	0.6162291
13773	129	182266	182267	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.659595	3.821605	1.1781356	-	-	-	hypothetical protein	1.291274	2.820649	0.9409501	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	1.356603e-01	-3.333707e-02	-4.140232e-01	-9.004252e-01	3.602130e+00		 0	 2	 TRUE	 TRUE	-21	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3791352	0.3993385	U	0.4686274	0.6162291
13773	129	182267	182268	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.291274	2.820649	0.9409501	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.377136	3.051858	1.0227254	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	7.372302e-03	 1.188995e-02	 1.086532e-01	 5.845769e-01	1.224731e-01		 2	 0	 TRUE	 TRUE	-20	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7152163	0.6002255	U	0.4686274	0.6162291
13773	129	182268	182269	1	 426	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.377136	3.051858	1.0227254	-	-	-	P. aerophilum family 1964 protein	1.434811	3.162538	1.0684434	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	3.326430e-03	 1.231307e-03	 2.182964e-02	 3.788059e-02	2.994265e-01		 0	 0	 TRUE	 TRUE	-19	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179576	0.5419791	U	0.4686274	0.6162291
13773	129	182269	182270	1	 182	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.434811	3.162538	1.0684434	-	-	-	P. aerophilum family 1964 protein	1.357337	2.940899	1.0208669	-	-	-	paREP8	 0.000000e+00	 0	6.002262e-03	 1.559609e-03	 6.074067e-02	 4.570479e-02	4.530127e-01		 0	 0	 TRUE	 TRUE	-18	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185842	0.5032088	U	0.4686274	0.6162291
13773	129	182270	182271	1	  44	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.357337	2.940899	1.0208669	-	-	-	paREP8	1.469060	3.861273	1.1846710	-	-	-	hypothetical protein	 0.000000e+00	 0	1.248200e-02	-1.661676e-03	-2.036430e-02	-1.912830e-01	9.908117e-01		 0	 0	 TRUE	 TRUE	-17	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4670745	0.4400938	U	0.4686274	0.6162291
13773	129	182271	182272	1	 222	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.469060	3.861273	1.1846710	-	-	-	hypothetical protein	1.714177	3.796050	1.1143946	-	-	-	hypothetical protein	 0.000000e+00	 0	6.008231e-02	 4.642572e-03	 2.495940e-01	 2.533801e-01	5.094213e-01		 0	 0	FALSE	 TRUE	-18	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5711958	0.4915849	U	0.4686274	0.6162291
13773	129	182272	182273	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.714177	3.796050	1.1143946	-	-	-	hypothetical protein	1.515251	3.398809	1.1402124	-	-	-	hypothetical protein	 0.000000e+00	 0	3.957122e-02	 1.678102e-02	 5.193537e-02	 5.792613e-01	1.437358e-01		 0	 0	 TRUE	 TRUE	-17	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7123715	0.5944258	U	0.4686274	0.6162291
13773	129	182273	182274	1	  18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.515251	3.398809	1.1402124	-	-	-	hypothetical protein	1.473344	3.441782	1.1343951	-	-	-	hypothetical protein	 0.000000e+00	 0	1.756271e-03	 1.401746e-03	 2.799499e-02	 1.780236e-01	8.730370e-02		 0	 0	 TRUE	 TRUE	-16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5414952	0.6120657	U	0.4686274	0.6162291
13773	129	182274	182275	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.473344	3.441782	1.1343951	-	-	-	hypothetical protein	1.389650	3.149471	1.0715611	-	-	-	hypothetical protein	 0.000000e+00	 0	7.004693e-03	-1.355312e-03	 1.334857e-02	-1.509180e-01	6.456610e-01		 0	 0	 TRUE	 TRUE	-15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4763942	0.4708055	U	0.4686274	0.6162291
13773	129	182275	182276	1	  33	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.389650	3.149471	1.0715611	-	-	-	hypothetical protein	1.475138	3.759607	1.1642730	-	-	-	hypothetical protein	 0.000000e+00	 0	7.308334e-03	-1.466126e-03	-4.653963e-03	-1.602053e-01	6.756007e-01		 0	 0	 TRUE	 TRUE	-14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4740776	0.4673400	U	0.4686274	0.6162291
13773	129	182276	182277	1	  25	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.475138	3.759607	1.1642730	-	-	-	hypothetical protein	1.430996	3.253966	1.1196774	-	-	-	paREP1	 0.000000e+00	 0	1.948507e-03	-4.843226e-04	 1.469942e-02	-3.267505e-02	1.768774e-01		 0	 0	FALSE	 TRUE	-15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5114123	0.5857870	U	0.4686274	0.6162291
13773	129	182277	182278	1	 108	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430996	3.253966	1.1196774	-	-	-	paREP1	1.360754	2.963294	1.0318633	-	-	-	hypothetical protein	 0.000000e+00	 0	4.933982e-03	 1.848701e-03	 6.215977e-02	 7.395296e-02	3.797889e-01		 0	 0	 TRUE	 TRUE	-14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179099	0.5171998	U	0.4686274	0.6162291
13773	129	182278	182279	1	  42	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.360754	2.963294	1.0318633	-	-	-	hypothetical protein	1.295479	2.835980	0.9116684	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	glycosyl transferase, putative	 0.000000e+00	 0	4.260907e-03	 1.413187e-02	 2.268421e-01	 6.865484e-01	5.551213e-02		 0	 0	 TRUE	 TRUE	-13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7487698	0.6218902	U	0.4686274	0.6162291
13773	129	182279	182280	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.295479	2.835980	0.9116684	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	glycosyl transferase, putative	1.505620	3.164836	1.0672619	5428	Uncharacterized conserved small protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.415937e-02	-8.454764e-03	-1.323838e-01	-5.150945e-01	2.232765e+00		 0	 0	 TRUE	 TRUE	-12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4039311	0.4054672	U	0.4686274	0.6162291
13773	129	182280	182281	1	  22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.505620	3.164836	1.0672619	5428	Uncharacterized conserved small protein	S	conserved hypothetical protein	1.374988	3.153171	1.0910002	-	-	-	paREP1	 0.000000e+00	 0	1.706469e-02	-4.143208e-03	-2.034854e-02	-3.399458e-01	1.367984e+00		 0	 0	 TRUE	 TRUE	-11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4302357	0.4212714	U	0.4686274	0.6162291
13773	129	182281	182282	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.374988	3.153171	1.0910002	-	-	-	paREP1	1.431902	3.094387	1.0542379	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	3.239172e-03	 1.489223e-03	 2.428996e-02	 5.802773e-02	2.894324e-01		 0	 0	 TRUE	 TRUE	-10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186413	0.5469760	U	0.4686274	0.6162291
13773	129	182282	182283	1	  79	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.431902	3.094387	1.0542379	-	-	-	P. aerophilum family 1964 protein	1.479891	3.506110	1.1686165	-	-	-	hypothetical protein	 0.000000e+00	 0	2.302991e-03	-5.554657e-04	 1.534072e-02	-3.357268e-02	2.085187e-01		 0	 0	 TRUE	 TRUE	 -9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5110166	0.5767479	U	0.4686274	0.6162291
13773	129	182283	182284	1	 245	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.479891	3.506110	1.1686165	-	-	-	hypothetical protein	1.664680	3.449679	1.0868861	-	-	-	hypothetical protein	 0.000000e+00	 0	3.414690e-02	 6.078319e-03	 2.052704e-01	 3.449593e-01	3.384150e-01		 0	 0	 TRUE	 TRUE	 -8	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6109214	0.5278884	U	0.4686274	0.6162291
13773	129	182284	182285	1	  -6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.664680	3.449679	1.0868861	-	-	-	hypothetical protein	1.357276	2.816641	0.9869405	5428	Uncharacterized conserved small protein	S	conserved hypothetical protein	 0.000000e+00	 0	9.449745e-02	-2.007400e-02	-3.070038e-01	-6.964547e-01	2.830038e+00		 0	 1	 TRUE	 TRUE	 -7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3874750	0.4016632	U	0.4686274	0.6162291
13773	129	182285	182286	1	 345	Same	+	+	 0.000000	0	  0.000000	 -0.11778304	1.357276	2.816641	0.9869405	5428	Uncharacterized conserved small protein	S	conserved hypothetical protein	1.371554	2.952738	1.0379826	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 2.394346e-02	 1	2.038830e-04	 7.514182e-03	 1.022878e-01	 4.784243e-01	7.388346e-03		 1	13	 TRUE	 TRUE	 -6	 TRUE	0.4469764	0.2945188	0.5480306	0.4469764	0.6329203	0.7020387	0.6658667	0.6442479	U	0.4686274	0.5554237
13773	129	182286	182287	1	   8	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.371554	2.952738	1.0379826	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.399566	3.095248	1.0385645	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 0.000000e+00	 0	7.846408e-04	 4.137796e-03	 5.975188e-02	 2.763786e-01	5.056458e-02	M	13	 0	 TRUE	 TRUE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5832948	0.6236602	Y	1.4497162	0.7118045
13773	129	182287	182288	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.399566	3.095248	1.0385645	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.323517	3.353834	1.0672037	-	-	-	hypothetical protein	 0.000000e+00	 0	5.783416e-03	 6.627430e-03	 1.329329e-01	 3.772062e-01	2.134539e-01		 0	 0	 TRUE	 TRUE	 -4	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6238451	0.5754016	U	0.4686274	0.6162291
13773	129	182288	182289	1	 -37	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.323517	3.353834	1.0672037	-	-	-	hypothetical protein	1.327074	2.845907	0.9751546	-	-	-	hypothetical protein	 0.000000e+00	 0	1.265180e-05	 1.589738e-02	 2.043363e-01	 7.789239e-01	8.481519e-05		 0	 0	FALSE	 TRUE	 -5	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7777240	0.6551679	U	0.4686274	0.6162291
13773	129	182289	182290	1	 -12	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.327074	2.845907	0.9751546	-	-	-	hypothetical protein	1.415749	3.428400	1.0697421	-	-	-	hypothetical protein	 0.000000e+00	 0	7.863179e-03	 4.431265e-03	 3.652718e-02	 2.250524e-01	3.864392e-01		 0	 0	 TRUE	 TRUE	 -4	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5596744	0.5147662	U	0.4686274	0.6162291
13773	129	182290	182291	1	 -18	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.415749	3.428400	1.0697421	-	-	-	hypothetical protein	1.451915	3.729576	1.1204724	-	-	-	hypothetical protein	 0.000000e+00	 0	1.308032e-03	-1.862011e-05	 1.729418e-02	-2.596759e-02	1.279037e-01		 0	 0	FALSE	 TRUE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5135970	0.5985607	U	0.4686274	0.6162291
13773	129	182291	182292	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.451915	3.729576	1.1204724	-	-	-	hypothetical protein	1.363728	3.479496	1.1351885	-	-	-	hypothetical protein	 0.000000e+00	 0	7.777007e-03	-4.579496e-05	 3.971804e-02	-7.129424e-02	6.481300e-01		 0	 0	FALSE	 TRUE	 -6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5012661	0.4705979	U	0.4686274	0.6162291
13773	129	182292	182293	1	  52	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.363728	3.479496	1.1351885	-	-	-	hypothetical protein	1.364235	3.158942	1.0515013	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	 0.000000e+00	 0	2.574256e-07	 7.640666e-03	 1.098492e-01	 4.931185e-01	9.423910e-06		 0	 0	FALSE	 TRUE	 -7	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6700358	0.6557762	U	0.4686274	0.6162291
13773	129	182293	182294	1	  72	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.364235	3.158942	1.0515013	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	1.420393	3.486424	1.1907116	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.153694e-03	 2.701870e-03	 3.547791e-02	 1.516460e-01	2.345146e-01		 0	 0	 TRUE	 TRUE	 -6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5309326	0.5687032	U	0.4686274	0.6162291
13773	129	182294	182295	1	 317	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.420393	3.486424	1.1907116	-	-	-	conserved within P. aerophilum	1.497122	3.374596	1.0756764	463	Glycosyltransferases involved in cell wall biogenesis	M	dolichol-phosphate mannosyltransferase	 0.000000e+00	 0	5.887343e-03	-1.417597e-03	 7.032825e-03	-1.053051e-01	4.941993e-01		 0	 1	 TRUE	 TRUE	 -5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4895405	0.4931854	U	0.4686274	0.6162291
13773	129	182295	182296	1	   8	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.497122	3.374596	1.0756764	463	Glycosyltransferases involved in cell wall biogenesis	M	dolichol-phosphate mannosyltransferase	1.400555	2.998989	1.0416103	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 6.480885e-03	 1	9.325203e-03	-2.324776e-03	-5.191422e-03	-2.012747e-01	8.104145e-01	M	 1	28	 TRUE	 TRUE	 -4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5633858	0.4640987	0.4540804	Y	1.4497162	0.7118045
13773	129	182296	182297	1	  -3	Same	+	+	 1.386294	0	  1.386294	  0.98504867	1.400555	2.998989	1.0416103	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.602482	3.541892	1.0325110	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	-2.792919e-02	 9	4.077435e-02	-7.681032e-03	-1.766302e-02	-3.596912e-01	1.646583e+00	M	28	 9	 TRUE	 TRUE	 -3	 TRUE	2.9315946	1.6381882	0.5480306	2.9462377	0.7702221	0.5246855	0.4261972	0.4134553	Y	1.4497162	0.8866684
13773	129	182297	182298	1	 368	Same	+	+	 0.000000	0	  0.000000	 -0.07232066	1.602482	3.541892	1.0325110	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	1.643890	3.457129	0.9462797	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 1.668113e-02	 3	1.714652e-03	 2.908413e-02	 3.969279e-01	 8.061354e-01	3.313094e-03	M	 9	 3	 TRUE	 TRUE	 -2	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.7136133	0.6526578	0.7880025	0.6480385	Y	1.4497162	0.6595066
13773	129	182298	182299	1	  35	Same	+	+	 0.000000	0	  0.000000	 -0.05918887	1.643890	3.457129	0.9462797	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.662163	3.514107	1.0342301	500	SAM-dependent methyltransferases	QR	conserved protein	 4.578021e-02	 1	3.338974e-04	 4.057259e-02	 5.138370e-01	 8.730169e-01	2.126270e-04		 3	 1	 TRUE	 TRUE	 -1	 TRUE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.8313457	0.7998677	0.6544230	U	0.4686274	0.5589164
13773	129	182299	182300	1	 -16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.662163	3.514107	1.0342301	500	SAM-dependent methyltransferases	QR	conserved protein	1.633679	3.765655	1.1710826	-	-	-	hypothetical protein	 0.000000e+00	 0	8.113325e-04	 3.842041e-02	 4.415282e-01	 8.636219e-01	6.031303e-04		 1	 0	 TRUE	 TRUE	  0	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7974794	0.6529329	U	0.4686274	0.6162291
13773	129	182300	182301	1	  52	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.633679	3.765655	1.1710826	-	-	-	hypothetical protein	1.515875	3.279334	1.0598322	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	 0.000000e+00	 0	1.387784e-02	 1.175413e-02	 8.434602e-02	 5.504094e-01	1.004642e-01		 0	 0	 TRUE	 TRUE	  1	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6988730	0.6066151	U	0.4686274	0.6162291
13773	129	182301	182302	1	1137	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.515875	3.279334	1.0598322	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	1.434136	3.435078	1.1246668	-	-	-	conserved within P. aerophilum, degenerate	 0.000000e+00	 0	6.681146e-03	-1.112729e-03	-2.075447e-03	-3.915046e-02	4.427406e-01		 0	 0	 TRUE	 TRUE	  2	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5092929	0.5051964	U	0.4686274	0.6162291
13773	129	182302	182303	1	 122	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.434136	3.435078	1.1246668	-	-	-	conserved within P. aerophilum, degenerate	1.337418	3.213385	1.1259724	-	-	-	hypothetical protein	 0.000000e+00	 0	9.354455e-03	 1.966805e-03	 7.596683e-02	 5.522117e-02	6.103890e-01		 0	 0	FALSE	 TRUE	  1	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187270	0.4756240	U	0.4686274	0.6162291
13773	129	182303	182304	1	  78	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.337418	3.213385	1.1259724	-	-	-	hypothetical protein	1.594369	3.506320	1.0689681	-	-	-	hypothetical protein	 0.000000e+00	 0	6.602375e-02	-1.629567e-02	-1.508718e-01	-7.250215e-01	2.900185e+00		 0	 0	 TRUE	 TRUE	  2	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3855797	0.4011845	U	0.4686274	0.6162291
13773	129	182304	182305	1	  29	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.594369	3.506320	1.0689681	-	-	-	hypothetical protein	1.469109	3.282375	1.1226169	-	-	-	hypothetical protein	 0.000000e+00	 0	1.569006e-02	 2.532960e-03	-7.621540e-04	 2.241454e-01	3.537648e-01		 0	 0	 TRUE	 TRUE	  3	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5587563	0.5241295	U	0.4686274	0.6162291
13773	129	182305	182306	1	 817	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.469109	3.282375	1.1226169	-	-	-	hypothetical protein	1.521885	3.387503	1.0548577	-	-	-	hypothetical protein	 0.000000e+00	 0	2.785353e-03	 1.248843e-03	 4.716175e-02	 1.652972e-01	1.368375e-01		 0	 0	 TRUE	 TRUE	  4	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5366428	0.5965788	U	0.4686274	0.6162291
13773	129	182306	182307	1	  34	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.521885	3.387503	1.0548577	-	-	-	hypothetical protein	1.525716	3.422661	1.1090150	-	-	-	hypothetical protein	 0.000000e+00	 0	1.467738e-05	 5.239247e-03	 8.340536e-02	 4.120310e-01	4.293769e-04		 0	 0	 TRUE	 TRUE	  5	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6397142	0.6535639	U	0.4686274	0.6162291
13773	129	182307	182308	1	 276	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.525716	3.422661	1.1090150	-	-	-	hypothetical protein	1.572433	3.270698	1.0780297	-	-	-	hypothetical protein	 0.000000e+00	 0	2.182485e-03	 8.996167e-03	 1.491011e-01	 5.276801e-01	2.451159e-02		 0	 0	 TRUE	 TRUE	  6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6877943	0.6356211	U	0.4686274	0.6162291
13773	129	182308	182309	1	 124	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.572433	3.270698	1.0780297	-	-	-	hypothetical protein	1.606786	3.741842	1.1611464	-	-	-	hypothetical protein	 0.000000e+00	 0	1.180095e-03	 1.880888e-02	 2.647721e-01	 7.089537e-01	4.561173e-03		 0	 0	 TRUE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7563161	0.6466721	U	0.4686274	0.6162291
13773	129	182309	182310	1	 476	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.606786	3.741842	1.1611464	-	-	-	hypothetical protein	1.552959	3.515751	1.0701886	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 0.000000e+00	 0	2.897392e-03	 1.578261e-02	 1.701474e-01	 6.605242e-01	1.507826e-02		 0	 0	 TRUE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7396012	0.6403514	U	0.4686274	0.6162291
13773	129	182310	182311	1	 121	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.552959	3.515751	1.0701886	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.478478	3.562969	1.1431846	-	-	-	hypothetical protein	 0.000000e+00	 0	5.547367e-03	 2.750912e-03	 2.856857e-02	 2.666389e-01	1.598772e-01		 0	 0	FALSE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5762566	0.5899841	U	0.4686274	0.6162291
13773	129	182311	182312	1	 141	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.478478	3.562969	1.1431846	-	-	-	hypothetical protein	1.341111	3.513901	1.2100912	-	-	-	hypothetical protein	 0.000000e+00	 0	1.886974e-02	-2.986997e-03	 1.483578e-02	-2.924340e-01	1.393233e+00		 0	 0	FALSE	 TRUE	  6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4423997	0.4200228	U	0.4686274	0.6162291
13773	129	182312	182313	1	 -10	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.341111	3.513901	1.2100912	-	-	-	hypothetical protein	1.537136	3.454660	1.0823815	-	-	-	hypothetical protein	 0.000000e+00	 0	3.842600e-02	-9.455963e-03	-1.020397e-01	-5.804275e-01	2.337167e+00		 0	 0	FALSE	 TRUE	  5	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3959084	0.4048015	U	0.4686274	0.6162291
13773	129	182313	182314	1	 129	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.537136	3.454660	1.0823815	-	-	-	hypothetical protein	1.709547	3.756470	1.1375998	-	-	-	hypothetical protein	 0.000000e+00	 0	2.972561e-02	 2.213504e-02	 4.301189e-01	 6.822852e-01	7.256470e-02		 0	 0	 TRUE	 TRUE	  6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7474495	0.6171587	U	0.4686274	0.6162291
13773	129	182314	182315	1	 118	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.709547	3.756470	1.1375998	-	-	-	hypothetical protein	1.629491	3.659627	1.1113919	-	-	-	hypothetical protein	 0.000000e+00	 0	6.408945e-03	 4.597697e-02	 4.696219e-01	 8.828696e-01	3.960398e-03		 0	 0	 TRUE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8013042	0.6473139	U	0.4686274	0.6162291
13773	129	182315	182316	1	 454	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.629491	3.659627	1.1113919	-	-	-	hypothetical protein	1.424738	3.398583	1.1701283	-	-	-	hypothetical protein	 0.000000e+00	 0	4.192408e-02	-4.747232e-03	-1.135150e-01	-1.583028e-01	1.172641e+00		 0	 0	 TRUE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4747262	0.4295614	U	0.4686274	0.6162291
13773	129	182316	182317	1	  74	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.424738	3.398583	1.1701283	-	-	-	hypothetical protein	1.480989	2.998141	1.1184797	-	-	-	hypothetical protein	 0.000000e+00	 0	3.164162e-03	-7.888784e-04	 1.193399e-02	-6.511274e-02	3.002670e-01		 0	 0	FALSE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5024770	0.5413986	U	0.4686274	0.6162291
13773	129	182317	182318	1	 158	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.480989	2.998141	1.1184797	-	-	-	hypothetical protein	1.547871	3.362495	1.0999044	-	-	-	hypothetical protein	 0.000000e+00	 0	4.473218e-03	 2.855343e-03	 7.553650e-02	 2.756535e-01	1.323329e-01		 0	 0	FALSE	 TRUE	  6	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5830549	0.5978214	U	0.4686274	0.6162291
13773	129	182318	182319	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.547871	3.362495	1.0999044	-	-	-	hypothetical protein	1.492861	3.299883	1.1405026	-	-	-	hypothetical protein	 0.000000e+00	 0	3.026084e-03	 4.000755e-03	 4.824486e-02	 3.362180e-01	7.933107e-02		 0	 0	 TRUE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6076712	0.6149078	U	0.4686274	0.6162291
13773	129	182319	182320	1	 307	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.492861	3.299883	1.1405026	-	-	-	hypothetical protein	1.710299	3.924378	1.1990936	-	-	-	hypothetical protein	 0.000000e+00	 0	4.727943e-02	 1.073635e-02	 3.121329e-01	 4.432760e-01	2.667726e-01		 0	 0	 TRUE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6527700	0.5549894	U	0.4686274	0.6162291
13773	129	182320	182321	1	 391	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.710299	3.924378	1.1990936	-	-	-	hypothetical protein	1.433977	3.103026	1.0073698	-	-	-	paREP15, putative coiled-coil protein	 0.000000e+00	 0	7.635422e-02	-4.509179e-03	-2.014443e-01	-6.492426e-02	1.079813e+00		 0	 0	FALSE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5025560	0.4343694	U	0.4686274	0.6162291
13773	129	182321	182322	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.433977	3.103026	1.0073698	-	-	-	paREP15, putative coiled-coil protein	1.791851	4.059936	1.1704599	-	-	-	hypothetical protein	 0.000000e+00	 0	1.280742e-01	-5.929508e-03	 2.449972e-01	-6.610284e-02	1.116809e+00		 0	 0	FALSE	 TRUE	  6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5021988	0.4319393	U	0.4686274	0.6162291
13773	129	182322	182323	1	 743	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.791851	4.059936	1.1704599	-	-	-	hypothetical protein	1.319622	2.943672	1.1463830	-	-	-	hypothetical protein	 0.000000e+00	 0	2.230003e-01	-4.486246e-02	-7.540712e-01	-8.889693e-01	3.564359e+00		 0	 0	FALSE	 TRUE	  5	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3796149	0.3994755	U	0.4686274	0.6162291
13773	129	182323	182324	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.319622	2.943672	1.1463830	-	-	-	hypothetical protein	1.261941	2.891263	1.0247312	-	-	-	paREP8	 0.000000e+00	 0	3.327050e-03	 2.496415e-02	 3.596783e-01	 8.813889e-01	6.997843e-03		 0	 0	 TRUE	 TRUE	  6	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8008250	0.6444474	U	0.4686274	0.6162291
13773	129	182324	182325	1	 540	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.261941	2.891263	1.0247312	-	-	-	paREP8	1.861645	4.477788	1.1808619	-	-	-	hypothetical protein	 0.000000e+00	 0	3.596443e-01	-7.772282e-02	-5.517503e-01	-9.785677e-01	3.914506e+00		 0	 0	 TRUE	 TRUE	  7	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3774536	0.3988586	U	0.4686274	0.6162291
13773	129	182325	182326	1	 348	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.861645	4.477788	1.1808619	-	-	-	hypothetical protein	1.423929	3.296565	1.1368809	-	-	-	paREP1	 0.000000e+00	 0	1.915957e-01	-1.126728e-02	-5.365037e-01	-1.843900e-01	1.396859e+00		 0	 0	 TRUE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4688720	0.4197398	U	0.4686274	0.6162291
13773	129	182326	182327	1	  57	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.423929	3.296565	1.1368809	-	-	-	paREP1	1.428213	3.288383	1.0756787	-	-	-	hypothetical protein	 0.000000e+00	 0	1.835558e-05	 6.366210e-04	 2.763023e-02	 2.555058e-02	2.191648e-03		 0	 0	FALSE	 TRUE	  7	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173896	0.6499017	U	0.4686274	0.6162291
13773	129	182327	182328	1	 210	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.428213	3.288383	1.0756787	-	-	-	hypothetical protein	1.481035	3.166317	1.0053279	-	-	-	paREP15, putative coiled-coil protein	 0.000000e+00	 0	2.790211e-03	-6.871117e-04	 1.357069e-02	-5.173727e-02	2.628234e-01		 0	 0	 TRUE	 TRUE	  8	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5062794	0.5561071	U	0.4686274	0.6162291
13773	129	182328	182329	1	1138	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.481035	3.166317	1.0053279	-	-	-	paREP15, putative coiled-coil protein	1.818289	4.447277	1.1822313	-	-	-	hypothetical protein	 0.000000e+00	 0	1.137402e-01	 1.087573e-02	 4.875192e-01	 3.722209e-01	3.835820e-01		 0	 0	 TRUE	 TRUE	  9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6215428	0.5159995	U	0.4686274	0.6162291
13773	129	182329	182330	1	 362	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.818289	4.447277	1.1822313	-	-	-	hypothetical protein	1.396272	3.124271	1.0483706	2002	Regulators of stationary/sporulation gene expression	K	conserved hypothetical protein	 0.000000e+00	 0	1.780990e-01	-2.022382e-02	-5.498599e-01	-4.523094e-01	2.099496e+00		 0	 1	 TRUE	 TRUE	 10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4115247	0.4071019	U	0.4686274	0.6162291
13773	129	182330	182331	1	 156	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.396272	3.124271	1.0483706	2002	Regulators of stationary/sporulation gene expression	K	conserved hypothetical protein	1.452165	3.109320	1.0670261	-	-	-	hypothetical protein	 0.000000e+00	 0	3.124040e-03	-4.254091e-05	 1.252585e-02	-4.750122e-02	3.130158e-01		 1	 0	 TRUE	 TRUE	 11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5071193	0.5374716	U	0.4686274	0.6162291
13773	129	182331	182332	1	 136	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.452165	3.109320	1.0670261	-	-	-	hypothetical protein	1.654814	4.336860	1.1973675	-	-	-	hypothetical protein	 0.000000e+00	 0	4.106676e-02	 1.569940e-04	 1.276571e-01	 9.764585e-02	6.908251e-01		 0	 0	 TRUE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183277	0.4655660	U	0.4686274	0.6162291
13773	129	182332	182333	1	1535	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.654814	4.336860	1.1973675	-	-	-	hypothetical protein	1.586230	3.559065	1.1245205	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	4.703813e-03	 2.742864e-02	 2.825265e-01	 7.854747e-01	9.203038e-03		 0	 0	 TRUE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7800462	0.6433585	U	0.4686274	0.6162291
13773	129	182333	182334	1	 312	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.586230	3.559065	1.1245205	-	-	-	conserved within P. aerophilum	1.484243	3.057264	1.0117106	-	-	-	paREP15, putative coiled-coil protein	 0.000000e+00	 0	1.040117e-02	 4.429476e-03	 2.909822e-02	 3.376446e-01	1.913643e-01		 0	 0	 TRUE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6079402	0.5826327	U	0.4686274	0.6162291
13773	129	182334	182335	1	 914	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.484243	3.057264	1.0117106	-	-	-	paREP15, putative coiled-coil protein	1.524529	3.372280	1.0467910	-	-	-	hypothetical protein	 0.000000e+00	 0	1.622933e-03	 2.402575e-03	 5.967234e-02	 2.592518e-01	5.881463e-02		 0	 0	 TRUE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5733592	0.6209502	U	0.4686274	0.6162291
13773	129	182335	182336	1	 333	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.524529	3.372280	1.0467910	-	-	-	hypothetical protein	1.482996	3.558958	1.1696972	-	-	-	hypothetical protein	 0.000000e+00	 0	1.725000e-03	 2.311339e-03	 3.671525e-02	 2.513357e-01	6.492132e-02		 0	 0	 TRUE	 TRUE	 16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5695047	0.6191240	U	0.4686274	0.6162291
13773	129	182336	182337	1	 362	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.482996	3.558958	1.1696972	-	-	-	hypothetical protein	1.403828	3.238000	1.0917911	-	-	-	hypothetical protein	 0.000000e+00	 0	6.267551e-03	-1.503195e-03	 6.370931e-03	-1.475101e-01	5.901730e-01		 0	 0	 TRUE	 TRUE	 17	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4775341	0.4780286	U	0.4686274	0.6162291
13773	129	182337	182338	1	 123	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.403828	3.238000	1.0917911	-	-	-	hypothetical protein	1.463087	3.241807	1.1117737	-	-	-	hypothetical protein	 0.000000e+00	 0	3.511578e-03	-5.562158e-04	 8.836145e-03	-7.927217e-02	3.455960e-01		 0	 0	FALSE	 TRUE	 16	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4981380	0.5257766	U	0.4686274	0.6162291
13773	129	182338	182339	1	 -12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.463087	3.241807	1.1117737	-	-	-	hypothetical protein	1.607058	3.610275	1.1453743	-	-	-	hypothetical protein	 0.000000e+00	 0	2.072764e-02	 1.820326e-03	 1.032104e-01	 1.841108e-01	4.478619e-01		 0	 0	FALSE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5435713	0.5041686	U	0.4686274	0.6162291
13773	129	182339	182340	1	  52	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.607058	3.610275	1.1453743	-	-	-	hypothetical protein	1.442568	3.108607	1.0680628	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	2.705694e-02	-1.373755e-03	-5.666310e-02	 1.281357e-02	7.467719e-01		 0	 0	FALSE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184664	0.4598829	U	0.4686274	0.6162291
13773	129	182340	182341	1	 630	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.442568	3.108607	1.0680628	-	-	-	P. aerophilum family 1964 protein	1.327670	2.866640	0.9981864	2062	Phosphohistidine phosphatase SixA	T	conserved hypothetical protein	 0.000000e+00	 0	1.320151e-02	 1.091865e-03	 7.217946e-02	-1.276881e-02	7.925509e-01		 0	 2	FALSE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174373	0.4565008	U	0.4686274	0.6162291
13773	129	182341	182342	1	 451	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.327670	2.866640	0.9981864	2062	Phosphohistidine phosphatase SixA	T	conserved hypothetical protein	1.531416	3.246920	1.0047362	-	-	-	paREP15, putative coiled-coil protein	 0.000000e+00	 0	4.151234e-02	-9.900663e-03	-1.176346e-01	-6.008061e-01	2.439158e+00		 2	 0	FALSE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3940489	0.4037939	U	0.4686274	0.6162291
13773	129	182342	182343	1	 552	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.531416	3.246920	1.0047362	-	-	-	paREP15, putative coiled-coil protein	1.324435	3.016118	1.0444235	-	-	-	paREP1	 0.000000e+00	 0	4.284123e-02	-1.015957e-02	-7.338017e-02	-6.065983e-01	2.465599e+00		 0	 1	 TRUE	 TRUE	 13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3931159	0.4036556	U	0.4686274	0.6162291
13773	129	182343	182344	1	 731	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.324435	3.016118	1.0444235	-	-	-	paREP1	1.526026	3.258813	1.0800914	5550	Predicted aspartyl protease	O	conserved within P. aerophilum	 0.000000e+00	 0	4.063903e-02	-9.475271e-03	-1.168375e-01	-5.787789e-01	2.367772e+00		 1	 0	FALSE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3961402	0.4042444	U	0.4686274	0.6162291
13773	129	182344	182345	1	  17	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.526026	3.258813	1.0800914	5550	Predicted aspartyl protease	O	conserved within P. aerophilum	1.691996	3.954591	1.1726342	-	-	-	hypothetical protein	 0.000000e+00	 0	2.754620e-02	 1.795694e-02	 3.635621e-01	 6.330394e-01	9.756633e-02		 0	 0	 TRUE	 TRUE	 13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7310330	0.6075710	U	0.4686274	0.6162291
13773	129	182345	182346	1	  -6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.691996	3.954591	1.1726342	-	-	-	hypothetical protein	1.724784	3.698313	1.0783062	-	-	-	P. aerophilum family 1964 protein, degenerate	 0.000000e+00	 0	1.075028e-03	 6.577881e-02	 8.326394e-01	 9.462195e-01	1.325237e-04		 0	 0	FALSE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8109474	0.6548417	U	0.4686274	0.6162291
13773	129	182346	182347	1	 152	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.724784	3.698313	1.0783062	-	-	-	P. aerophilum family 1964 protein, degenerate	1.468102	3.469237	1.1561796	-	-	-	hypothetical protein	 0.000000e+00	 0	6.588580e-02	 4.568017e-03	-1.149524e-01	 2.433136e-01	5.326871e-01		 0	 0	FALSE	 TRUE	 11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5666272	0.4869405	U	0.4686274	0.6162291
13773	129	182347	182348	1	 138	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.468102	3.469237	1.1561796	-	-	-	hypothetical protein	1.402819	3.161144	1.1237955	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	4.261756e-03	-8.115998e-04	 1.653091e-02	-9.675293e-02	4.067366e-01		 0	 0	 TRUE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4931567	0.5111403	U	0.4686274	0.6162291
13773	129	182348	182349	1	 242	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.402819	3.161144	1.1237955	-	-	-	conserved within P. aerophilum	1.578979	3.835558	1.1871667	-	-	-	hypothetical protein	 0.000000e+00	 0	3.103214e-02	-6.197287e-03	-1.637576e-02	-3.201208e-01	1.468505e+00		 0	 0	 TRUE	 TRUE	 13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4355148	0.4178096	U	0.4686274	0.6162291
13773	129	182349	182350	1	  48	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.578979	3.835558	1.1871667	-	-	-	hypothetical protein	1.663793	3.630068	1.0717755	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 0.000000e+00	 0	7.193455e-03	 2.709931e-02	 4.108189e-01	 7.766245e-01	1.470366e-02		 0	 0	FALSE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7763347	0.6405191	U	0.4686274	0.6162291
13773	129	182350	182351	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.663793	3.630068	1.0717755	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.582537	3.456512	1.0611029	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 0.000000e+00	 0	6.602531e-03	 2.785509e-02	 2.755367e-01	 7.860425e-01	1.238361e-02	M	 0	 1	 TRUE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7805116	0.6418162	Y	1.4497162	0.7118045
13773	129	182351	182352	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.582537	3.456512	1.0611029	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.601972	3.591814	1.0780973	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 0.000000e+00	 0	3.777271e-04	 1.974765e-02	 2.655374e-01	 7.227756e-01	1.246312e-03	M	 1	 0	 TRUE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7612563	0.6515199	Y	1.4497162	0.7118045
13773	129	182352	182353	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.601972	3.591814	1.0780973	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.630283	3.519767	1.0214138	438	Glycosyltransferase	M	glycosyltransferase (type 1)	 0.000000e+00	 0	8.015111e-04	 2.693724e-02	 3.593830e-01	 7.920555e-01	1.981377e-03	M	 0	 0	 TRUE	 TRUE	 15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7819098	0.6503033	Y	1.4497162	0.7118045
13773	129	182353	182354	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.630283	3.519767	1.0214138	438	Glycosyltransferase	M	glycosyltransferase (type 1)	1.705953	3.744206	1.0619546	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	 0.000000e+00	 0	5.725892e-03	 4.553838e-02	 6.364787e-01	 8.844970e-01	3.225333e-03	M	 0	 1	FALSE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8017836	0.6482245	Y	1.4497162	0.7118045
13773	129	182354	182355	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.705953	3.744206	1.0619546	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyltransferase (type 2)	1.744695	3.714975	0.9010390	-	-	-	hypothetical protein	 0.000000e+00	 0	1.500925e-03	 7.466296e-02	 9.476193e-01	 9.536797e-01	2.126270e-04		 1	 0	FALSE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8114326	0.6544230	U	0.4686274	0.6162291
13773	129	182355	182356	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.744695	3.714975	0.9010390	-	-	-	hypothetical protein	1.340482	2.883721	0.9630349	1232	Protoporphyrinogen oxidase	H	conserved hypothetical protein	 0.000000e+00	 0	1.633876e-01	-3.253023e-02	-5.468398e-01	-8.170083e-01	3.291593e+00		 0	 6	FALSE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3817691	0.4000228	U	0.4686274	0.6162291
13773	129	182356	182357	1	 128	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.340482	2.883721	0.9630349	1232	Protoporphyrinogen oxidase	H	conserved hypothetical protein	1.445917	3.114719	1.0011649	-	-	-	paREP7	 0.000000e+00	 0	1.111650e-02	 6.072987e-04	-3.324261e-03	-3.313918e-02	7.574209e-01		 6	 0	FALSE	 TRUE	 11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5113463	0.4587978	U	0.4686274	0.6162291
13773	129	182357	182358	1	 627	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.445917	3.114719	1.0011649	-	-	-	paREP7	1.488572	3.377628	1.1161137	-	-	-	paREP7	 0.000000e+00	 0	1.819428e-03	-2.035776e-04	 2.179161e-02	 1.724340e-02	1.537988e-01		 0	 0	FALSE	 TRUE	 10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178710	0.5921731	U	0.4686274	0.6162291
13773	129	182358	182359	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.488572	3.377628	1.1161137	-	-	-	paREP7	1.484665	3.402347	1.2067307	-	-	-	hypothetical protein	 0.000000e+00	 0	1.526649e-05	 1.237023e-03	 3.450227e-02	 1.750868e-01	7.215181e-04		 0	 0	 TRUE	 TRUE	 11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5403307	0.6523872	U	0.4686274	0.6162291
13773	129	182359	182360	1	   8	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.484665	3.402347	1.2067307	-	-	-	hypothetical protein	1.443478	2.827233	0.9997025	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.696315e-03	-2.633274e-04	 1.500657e-02	 8.085715e-03	1.484289e-01		 0	 0	 TRUE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191105	0.5935741	U	0.4686274	0.6162291
13773	129	182360	182361	1	 635	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.443478	2.827233	0.9997025	-	-	-	conserved hypothetical protein	1.523044	3.582634	1.1300851	-	-	-	hypothetical protein	 0.000000e+00	 0	6.330719e-03	-5.670779e-04	 2.698584e-02	 1.272581e-02	3.816831e-01		 0	 0	 TRUE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185310	0.5164229	U	0.4686274	0.6162291
13773	129	182361	182362	1	  45	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.523044	3.582634	1.1300851	-	-	-	hypothetical protein	1.524731	3.661744	1.2089984	531	Amino acid transporters	E	amino acid permease	 0.000000e+00	 0	2.845818e-06	 5.254798e-03	 8.279940e-02	 4.121206e-01	7.126832e-05		 0	28	 TRUE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6400243	0.6552829	U	0.4686274	0.6162291
13773	129	182362	182363	1	 711	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.524731	3.661744	1.2089984	531	Amino acid transporters	E	amino acid permease	1.465874	3.318462	1.0156462	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.464145e-03	 1.062041e-03	 2.002914e-02	 1.467963e-01	1.755887e-01		28	 0	 TRUE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5296058	0.5861247	U	0.4686274	0.6162291
13773	129	182363	182364	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.465874	3.318462	1.0156462	-	-	-	conserved within P. aerophilum	1.352662	3.015860	1.0642431	-	-	-	hypothetical protein	 0.000000e+00	 0	1.281706e-02	-1.429762e-03	 2.824263e-02	-1.732963e-01	9.801456e-01		 0	 0	 TRUE	 TRUE	 16	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4721070	0.4412509	U	0.4686274	0.6162291
13773	129	182364	182365	1	 450	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.352662	3.015860	1.0642431	-	-	-	hypothetical protein	1.387849	2.950364	0.9935059	-	-	-	paREP8	 0.000000e+00	 0	1.238122e-03	 6.273775e-03	 7.959191e-02	 3.963567e-01	5.918746e-02		 0	 0	FALSE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6323925	0.6207976	U	0.4686274	0.6162291
13773	129	182365	182366	1	  47	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.387849	2.950364	0.9935059	-	-	-	paREP8	1.290822	2.829749	0.9741649	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	ADP ribose hydrolase, putative (mutT/nudix family protein)	 0.000000e+00	 0	9.414239e-03	 1.020334e-02	 1.952602e-01	 4.992340e-01	1.947363e-01		 0	20	FALSE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6724988	0.5814495	U	0.4686274	0.6162291
13773	129	182366	182367	1	 484	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.290822	2.829749	0.9741649	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	ADP ribose hydrolase, putative (mutT/nudix family protein)	1.397376	3.210011	1.1073654	803	ABC-type metal ion transport system, periplasmic component/surface adhesin	P	conserved hypothetical protein	 1.793207e-02	 1	1.135373e-02	 8.673605e-03	 6.408549e-02	 4.321287e-01	2.612520e-01		20	 1	FALSE	 TRUE	 13	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.6618908	0.6485535	0.5572152	U	0.4686274	0.5517368
13773	129	182367	182368	1	  53	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.397376	3.210011	1.1073654	803	ABC-type metal ion transport system, periplasmic component/surface adhesin	P	conserved hypothetical protein	1.512789	3.551488	1.1537967	530	Ca2+/Na+ antiporter	P	conserved within P. aerophilum	 0.000000e+00	 0	1.332024e-02	-3.316448e-03	-1.587645e-02	-2.612791e-01	1.062339e+00	P	 1	 0	 TRUE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4496862	0.4351902	Y	1.4497162	0.7118045
13773	129	182368	182369	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.512789	3.551488	1.1537967	530	Ca2+/Na+ antiporter	P	conserved within P. aerophilum	1.338363	3.062940	1.0026084	5625	Predicted transcription regulator containing HTH domain	K	conserved hypothetical protein	 0.000000e+00	 0	3.042429e-02	-6.939571e-03	-3.753045e-02	-4.886722e-01	2.022376e+00	0	 0	 0	 TRUE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4068595	0.4078248	N	0.5492530	0.6245624
13773	129	182369	182370	1	 -91	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.338363	3.062940	1.0026084	5625	Predicted transcription regulator containing HTH domain	K	conserved hypothetical protein	1.430461	3.320145	1.1277458	53	Predicted Co/Zn/Cd cation transporters	P	cation efflux system protein, conjectural	 0.000000e+00	 0	8.481885e-03	 2.365969e-03	 1.707007e-02	 9.231191e-02	5.349300e-01	0	 0	40	 TRUE	 TRUE	 16	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178943	0.4860301	N	0.5492530	0.6245624
13773	129	182370	182371	1	   2	Same	-	-	 0.000000	0	  0.000000	 -4.29371737	1.430461	3.320145	1.1277458	53	Predicted Co/Zn/Cd cation transporters	P	cation efflux system protein, conjectural	1.401303	3.083650	1.0788287	134	Indole-3-glycerol phosphate synthase	E	indole-3-glycerol-phosphate synthase	 1.633962e-02	40	8.501452e-04	 1.048491e-03	 3.825576e-02	 4.447143e-02	8.730370e-02	0	40	42	FALSE	 TRUE	 15	 TRUE	0.4469764	0.1835790	0.5480306	0.4469764	0.7733221	0.6505143	0.5185028	0.6120657	N	0.5492530	0.5291282
13773	129	182371	182372	1	  54	Divergent	-	+	 0.000000	0	  0.000000	 -0.29701340	1.401303	3.083650	1.0788287	134	Indole-3-glycerol phosphate synthase	E	indole-3-glycerol-phosphate synthase	1.365641	3.252753	1.1495084	1738	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.559339e-02	 2	1.271786e-03	 4.295264e-03	 8.326148e-02	 2.798901e-01	8.150740e-02		42	 2	FALSE	 TRUE	 14	FALSE	0.4469764	0.2556277	0.5480306	0.4469764	0.6838149	0.6420495	0.5842571	0.6138313	U	0.4686274	0.5431568
13773	129	182372	182373	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	 -0.12516314	1.365641	3.252753	1.1495084	1738	Uncharacterized conserved protein	S	conserved hypothetical protein	1.428979	3.508798	1.1857602	1968	Uncharacterized bacitracin resistance protein	V	bacitracin resistence protein	 1.633075e-04	 2	4.011685e-03	 1.922021e-03	 2.581240e-02	 8.799576e-02	3.173243e-01		 2	33	 TRUE	 TRUE	 15	FALSE	0.4469764	0.2919799	0.5480306	0.4469764	0.6838149	0.4411893	0.5177244	0.5362123	U	0.4686274	0.5546248
13773	129	182373	182374	1	  40	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.428979	3.508798	1.1857602	1968	Uncharacterized bacitracin resistance protein	V	bacitracin resistence protein	1.408607	3.101819	1.0807917	-	-	-	hypothetical protein	 0.000000e+00	 0	4.150100e-04	 9.589881e-04	 3.532350e-02	 4.155356e-02	3.951033e-02		33	 0	FALSE	 TRUE	 14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183158	0.6282866	U	0.4686274	0.6162291
13773	129	182374	182375	1	 234	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.408607	3.101819	1.0807917	-	-	-	hypothetical protein	1.402752	3.027119	1.0534508	535	Predicted Fe-S oxidoreductases	R	metallo cofactor biosynthesis protein	 0.000000e+00	 0	3.428851e-05	 2.081144e-03	 4.643057e-02	 1.276645e-01	4.255485e-03		 0	29	 TRUE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5237362	0.6470653	U	0.4686274	0.6162291
13773	129	182375	182376	1	 -22	Same	+	+	 0.000000	0	  0.000000	 -3.70119159	1.402752	3.027119	1.0534508	535	Predicted Fe-S oxidoreductases	R	metallo cofactor biosynthesis protein	1.417603	3.190579	1.0968971	181	Porphobilinogen deaminase	H	porphobilinogen deaminase (hemC)	 1.034651e-02	29	2.205674e-04	 1.643574e-03	 3.684589e-02	 9.372079e-02	2.309094e-02		29	50	 TRUE	 TRUE	 16	 TRUE	0.4469764	0.1858641	0.5480306	0.4469764	0.7756873	0.6032469	0.5179600	0.6362005	U	0.4686274	0.5210302
13773	129	182376	182377	1	   4	Convergent	+	-	 0.000000	0	  0.000000	 -0.38282396	1.417603	3.190579	1.0968971	181	Porphobilinogen deaminase	H	porphobilinogen deaminase (hemC)	1.432487	3.086492	1.0490135	1522	Transcriptional regulators	K	heme biosynthesis protein	 2.768716e-03	 5	2.215289e-04	 6.388244e-04	 2.621523e-02	 2.039805e-02	2.379596e-02	0	50	 5	 TRUE	 TRUE	 17	FALSE	0.4469764	0.2444483	0.5480306	0.4469764	0.7448207	0.5102443	0.5176370	0.6358881	N	0.5492530	0.5483979
13773	129	182377	182378	1	 464	Same	-	-	 0.000000	0	  0.000000	 -0.46286667	1.432487	3.086492	1.0490135	1522	Transcriptional regulators	K	heme biosynthesis protein	1.348758	2.882660	1.0122350	113	Delta-aminolevulinic acid dehydratase	H	porphobilinogen synthase (delta-aminolevulinic acid dehydratase) (hemB)	 2.218276e-02	 5	7.010597e-03	 1.940408e-03	 6.926892e-02	 6.701284e-02	4.920436e-01	0	 5	54	FALSE	 TRUE	 16	 TRUE	0.4469764	0.2366743	0.5480306	0.4469764	0.7448207	0.6931435	0.5181903	0.4938708	N	0.5492530	0.5459437
13773	129	182378	182379	1	  -3	Same	-	-	 4.965173	0	  4.965173	  4.40370356	1.348758	2.882660	1.0122350	113	Delta-aminolevulinic acid dehydratase	H	porphobilinogen synthase (delta-aminolevulinic acid dehydratase) (hemB)	1.428222	3.138849	1.0549033	1648	Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)	H	siroheme synthesis protein, conjectural	 3.159743e-02	 7	6.314527e-03	 2.378179e-03	 2.315635e-02	 1.074620e-01	4.225499e-01	H	54	 7	FALSE	 TRUE	 15	 TRUE	2.8309038	1.7539654	0.5480306	2.8934512	0.7596462	0.7463571	0.5195988	0.5083822	Y	1.4497162	0.9017791
13773	129	182379	182380	1	  28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.428222	3.138849	1.0549033	1648	Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)	H	siroheme synthesis protein, conjectural	1.404118	3.429374	1.1115850	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	5.810093e-04	 1.095425e-03	 3.785793e-02	 5.121483e-02	5.678510e-02		 7	 0	FALSE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187861	0.6215275	U	0.4686274	0.6162291
13773	129	182380	182381	1	  41	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.404118	3.429374	1.1115850	-	-	-	conserved within P. aerophilum	1.549005	3.440933	1.1578060	1587	Uroporphyrinogen-III synthase	H	hypothetical protein	 0.000000e+00	 0	2.099246e-02	-4.614659e-03	-1.469697e-02	-2.770780e-01	1.240924e+00		 0	 1	FALSE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4457664	0.4264809	U	0.4686274	0.6162291
13773	129	182381	182382	1	 -18	Same	-	-	 0.000000	0	  0.000000	 -0.11778304	1.549005	3.440933	1.1578060	1587	Uroporphyrinogen-III synthase	H	hypothetical protein	1.422070	3.201415	1.0944865	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase	 1.378638e-02	 1	1.611249e-02	-2.862247e-03	-3.474192e-02	-1.514428e-01	8.910896e-01	H	 1	27	FALSE	 TRUE	 12	 TRUE	0.4469764	0.2945188	0.5480306	0.4469764	0.6329203	0.6306941	0.4761393	0.4474444	Y	1.4497162	0.6577314
13773	129	182382	182383	1	 186	Divergent	-	+	 4.762174	0	  4.762174	  2.33615035	1.422070	3.201415	1.0944865	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase	1.431006	3.062010	1.0561681	1	Glutamate-1-semialdehyde aminotransferase	H	glutamate-1-semialdehyde aminotransferase (hemL)	 8.676326e-02	27	7.984495e-05	 5.977982e-04	 2.659930e-02	 2.091578e-02	1.057598e-02	H	27	51	FALSE	 TRUE	 11	FALSE	2.8442642	1.6811206	0.5480306	2.8973705	0.7761702	0.9607049	0.5176105	0.6424418	Y	1.4497162	0.8930882
13773	129	182383	182384	1	   4	Same	+	+	 2.512306	0	  2.512306	  1.53622726	1.431006	3.062010	1.0561681	1	Glutamate-1-semialdehyde aminotransferase	H	glutamate-1-semialdehyde aminotransferase (hemL)	1.360931	3.005505	1.0628543	535	Predicted Fe-S oxidoreductases	R	metallo cofactor biosynthesis protein	 1.032030e-02	12	4.910489e-03	 1.844243e-03	 6.202728e-02	 7.324440e-02	3.788436e-01		51	12	 TRUE	 TRUE	 12	 TRUE	2.9301853	1.6437389	0.5480306	2.9452541	0.7776747	0.6023048	0.5179544	0.5175511	U	0.4686274	0.8366907
13773	129	182384	182385	1	 356	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.360931	3.005505	1.0628543	535	Predicted Fe-S oxidoreductases	R	metallo cofactor biosynthesis protein	1.430439	2.811607	0.9847340	3809	Uncharacterized protein conserved in bacteria	S	conserved within P. aerophilum	 2.408805e-03	 1	4.831315e-03	 1.895554e-03	 2.323441e-02	 7.930221e-02	3.685226e-01		12	 1	 TRUE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5034409	0.5177783	0.5189918	U	0.4686274	0.6162291
13773	129	182385	182386	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430439	2.811607	0.9847340	3809	Uncharacterized protein conserved in bacteria	S	conserved within P. aerophilum	1.498054	3.210510	1.0696583	-	-	-	hypothetical protein	 0.000000e+00	 0	4.571830e-03	-9.777459e-04	 1.371974e-02	-5.487543e-02	3.685226e-01		 1	 0	 TRUE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5052768	0.5189918	U	0.4686274	0.6162291
13773	129	182386	182387	1	 254	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.498054	3.210510	1.0696583	-	-	-	hypothetical protein	1.404375	3.340411	1.1193302	428	Predicted divalent heavy-metal cations transporter	P	conserved hypothetical protein	 0.000000e+00	 0	8.775756e-03	-2.193907e-03	-4.829217e-03	-1.840613e-01	7.520870e-01		 0	 2	 TRUE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4691457	0.4594361	U	0.4686274	0.6162291
13773	129	182387	182388	1	 -23	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.404375	3.340411	1.1193302	428	Predicted divalent heavy-metal cations transporter	P	conserved hypothetical protein	1.483297	3.294665	1.1505697	373	Glutamyl-tRNA reductase	H	glutamyl tRNA reductase (hemA)	 2.318180e-03	 2	6.228703e-03	-1.500070e-03	 1.693223e-04	-1.453715e-01	5.819477e-01	0	 2	 6	 TRUE	 TRUE	 16	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5012279	0.4785376	0.4794292	N	0.5492530	0.6245624
13773	129	182388	182389	1	 128	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.483297	3.294665	1.1505697	373	Glutamyl-tRNA reductase	H	glutamyl tRNA reductase (hemA)	1.401513	3.213102	1.2136237	-	-	-	hypothetical protein	 0.000000e+00	 0	6.688581e-03	-1.591368e-03	 5.864261e-03	-1.580125e-01	6.321653e-01		 6	 0	FALSE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4748554	0.4727649	U	0.4686274	0.6162291
13773	129	182389	182390	1	 343	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.401513	3.213102	1.2136237	-	-	-	hypothetical protein	1.491610	3.171612	1.1014862	1759	ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)	R	conserved hypothetical protein	 0.000000e+00	 0	8.117422e-03	-2.006016e-03	-4.927947e-03	-1.824410e-01	7.322526e-01		 0	 9	FALSE	 TRUE	 14	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4694186	0.4614144	U	0.4686274	0.6162291
13773	129	182390	182391	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.491610	3.171612	1.1014862	1759	ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)	R	conserved hypothetical protein	1.528448	3.218938	1.0943457	1141	Ferredoxin	C	conserved within P. aerophilum	 0.000000e+00	 0	1.357067e-03	 3.098965e-03	 6.794270e-02	 3.037209e-01	4.750593e-02		 9	 0	 TRUE	 TRUE	 15	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5933690	0.6249782	U	0.4686274	0.6162291
13773	129	182391	182392	1	  47	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.528448	3.218938	1.0943457	1141	Ferredoxin	C	conserved within P. aerophilum	1.378206	3.077149	1.0665030	656	Aldo/keto reductases, related to diketogulonate reductase	R	oxidoreductase, conjectural	 0.000000e+00	 0	2.257278e-02	-5.639453e-03	-4.667650e-02	-4.004997e-01	1.607427e+00		 0	 0	FALSE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4191020	0.4145245	U	0.4686274	0.6162291
13773	129	182392	182393	1	  40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.378206	3.077149	1.0665030	656	Aldo/keto reductases, related to diketogulonate reductase	R	oxidoreductase, conjectural	1.371067	2.930141	1.0227925	1759	ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)	R	conserved hypothetical protein	 0.000000e+00	 0	5.096682e-05	 5.878792e-03	 9.225733e-02	 3.904185e-01	3.225333e-03		 0	 6	FALSE	 TRUE	 13	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6302998	0.6482245	U	0.4686274	0.6162291
13773	129	182393	182394	1	 368	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.371067	2.930141	1.0227925	1759	ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)	R	conserved hypothetical protein	1.416649	2.961109	1.0071993	-	-	-	hypothetical protein	 0.000000e+00	 0	2.077722e-03	 2.790830e-03	 4.004884e-02	 1.625907e-01	1.642022e-01		 6	 0	FALSE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5353966	0.5889325	U	0.4686274	0.6162291
13773	129	182394	182395	1	  81	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.416649	2.961109	1.0071993	-	-	-	hypothetical protein	1.372332	3.195823	1.1053740	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.963956e-03	 2.746862e-03	 6.566255e-02	 1.595374e-01	1.544013e-01		 0	 0	 TRUE	 TRUE	 13	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5344367	0.5918248	U	0.4686274	0.6162291
13773	129	182395	182396	1	 -24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.372332	3.195823	1.1053740	-	-	-	conserved within P. aerophilum	1.552874	3.825853	1.1942860	-	-	-	hypothetical protein	 0.000000e+00	 0	3.259513e-02	-8.023113e-03	-6.279134e-02	-4.825513e-01	1.942419e+00		 0	 0	FALSE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4079778	0.4090739	U	0.4686274	0.6162291
13773	129	182396	182397	1	  48	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.552874	3.825853	1.1942860	-	-	-	hypothetical protein	1.367045	3.008058	1.0636739	5483	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.453243e-02	-8.559727e-03	-8.743016e-02	-5.148753e-01	2.064063e+00		 0	 0	FALSE	 TRUE	 11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4041574	0.4074623	U	0.4686274	0.6162291
13773	129	182397	182398	1	 -22	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.367045	3.008058	1.0636739	5483	Uncharacterized conserved protein	S	conserved hypothetical protein	1.399879	3.096741	1.0813378	129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	EG	dihydroxy-acid dehydratase (ilvD)	 0.000000e+00	 0	1.078092e-03	 4.345107e-03	 6.021331e-02	 2.889607e-01	6.889114e-02		 0	53	 TRUE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5890110	0.6181692	U	0.4686274	0.6162291
13773	129	182398	182399	1	  31	Same	-	-	 2.662588	0	  2.662588	  2.33137949	1.399879	3.096741	1.0813378	129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	EG	dihydroxy-acid dehydratase (ilvD)	1.475641	3.137983	1.0635526	2100	Predicted Fe-S oxidoreductase	R	metallo cofactor biosynthesis protein	 2.350872e-02	 5	5.739965e-03	-1.249143e-03	 8.865352e-04	-1.376774e-01	5.599128e-01		53	 5	FALSE	 TRUE	 11	 TRUE	2.9244472	1.6792360	0.5480306	2.9399224	0.7448207	0.6978676	0.4799031	0.4824847	U	0.4686274	0.8428711
13773	129	182399	182400	1	   1	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.475641	3.137983	1.0635526	2100	Predicted Fe-S oxidoreductase	R	metallo cofactor biosynthesis protein	1.341579	2.917382	1.0286465	649	NADH:ubiquinone oxidoreductase 49 kD subunit 7	C	oxidoreductase, truncation	 0.000000e+00	 0	1.797286e-02	-2.662847e-03	 1.873409e-02	-2.690968e-01	1.325237e+00		 5	 0	FALSE	 TRUE	 10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4473191	0.4232149	U	0.4686274	0.6162291
13773	129	182400	182401	1	 135	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.341579	2.917382	1.0286465	649	NADH:ubiquinone oxidoreductase 49 kD subunit 7	C	oxidoreductase, truncation	1.453851	3.713231	1.1723590	-	-	-	hypothetical protein	 0.000000e+00	 0	1.260502e-02	-2.699050e-04	-1.302714e-02	-9.814119e-02	8.910896e-01		 0	 0	FALSE	 TRUE	  9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4922793	0.4474444	U	0.4686274	0.6162291
13773	129	182401	182402	1	 208	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.453851	3.713231	1.1723590	-	-	-	hypothetical protein	1.343146	2.895621	1.0444749	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	 0.000000e+00	 0	1.225543e-02	-2.660516e-04	 4.736776e-02	-9.731955e-02	8.780970e-01		 0	 7	FALSE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4928305	0.4482601	U	0.4686274	0.6162291
13773	129	182402	182403	1	  72	Same	+	+	 0.000000	0	  0.000000	 -0.07410797	1.343146	2.895621	1.0444749	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	1.473169	3.230688	1.0668696	61	Predicted sugar kinase	G	conserved hypothetical protein	 1.398112e-05	 7	1.690582e-02	-2.357170e-03	-3.537495e-02	-2.423571e-01	1.241779e+00	0	 7	11	 TRUE	 TRUE	  9	 TRUE	0.4469764	0.2976889	0.5480306	0.4469764	0.7596462	0.4392956	0.4531336	0.4263729	N	0.5492530	0.5651364
13773	129	182403	182404	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.473169	3.230688	1.0668696	61	Predicted sugar kinase	G	conserved hypothetical protein	1.364876	3.062657	1.0613008	1439	Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module	R	hypothetical protein	 2.190835e-03	 1	1.172743e-02	-1.883997e-03	 1.651409e-02	-2.066628e-01	9.877583e-01		11	 1	 TRUE	 TRUE	 10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4984228	0.4625024	0.4404584	U	0.4686274	0.6162291
13773	129	182404	182405	1	 -12	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.364876	3.062657	1.0613008	1439	Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module	R	hypothetical protein	1.396873	3.243631	1.1045625	170	Dolichol kinase	I	hypothetical protein	 0.000000e+00	 0	1.023819e-03	 4.716933e-03	 6.442910e-02	 3.148128e-01	6.069057e-02		 1	 0	 TRUE	 TRUE	 11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5976890	0.6202452	U	0.4686274	0.6162291
13773	129	182405	182406	1	  21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.396873	3.243631	1.1045625	170	Dolichol kinase	I	hypothetical protein	1.531033	3.398201	1.0765664	2090	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	1.799889e-02	-4.341973e-03	-2.147158e-02	-3.085789e-01	1.288391e+00		 0	 3	FALSE	 TRUE	 10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4377936	0.4246128	U	0.4686274	0.6162291
13773	129	182406	182407	1	  43	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.531033	3.398201	1.0765664	2090	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.377759	3.009526	1.0442571	162	Tyrosyl-tRNA synthetase	J	tyrosyl-tRNA synthetase	 5.374391e-03	 3	2.349271e-02	-5.864158e-03	-5.016560e-02	-4.124881e-01	1.656446e+00		 3	 9	FALSE	 TRUE	  9	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5484663	0.4171786	0.4131718	U	0.4686274	0.6162291
13773	129	182407	182408	1	 159	Convergent	+	-	 0.000000	0	  0.000000	 -0.20479441	1.377759	3.009526	1.0442571	162	Tyrosyl-tRNA synthetase	J	tyrosyl-tRNA synthetase	1.397593	3.042974	1.0656609	1078	HD superfamily phosphohydrolases	R	conserved hypothetical protein	 3.256383e-02	 7	3.933606e-04	 3.961493e-03	 6.063814e-02	 2.675849e-01	2.548225e-02		 9	 7	 TRUE	 TRUE	 10	FALSE	0.4469764	0.2714177	0.5480306	0.4469764	0.7596462	0.7542146	0.5771680	0.6352777	U	0.4686274	0.5481444
13773	129	182408	182409	1	  39	Divergent	-	+	 0.000000	0	  0.000000	 -0.05715841	1.397593	3.042974	1.0656609	1078	HD superfamily phosphohydrolases	R	conserved hypothetical protein	1.518119	3.493563	1.1816693	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	 5.947392e-03	 4	1.452652e-02	-3.589861e-03	-1.727972e-02	-2.703084e-01	1.108714e+00		 7	 4	FALSE	 TRUE	  9	FALSE	0.4469764	0.3074832	0.5480306	0.4469764	0.7323301	0.5560231	0.4469763	0.4322833	U	0.4686274	0.5594987
13773	129	182409	182410	1	  76	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.518119	3.493563	1.1816693	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	1.443213	3.100106	1.0356260	-	-	-	hypothetical protein	 0.000000e+00	 0	5.610819e-03	-5.457876e-04	 3.219340e-03	 1.122388e-02	3.492148e-01		 4	 0	 TRUE	 TRUE	 10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187914	0.5249480	U	0.4686274	0.6162291
13773	129	182410	182411	1	  92	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.443213	3.100106	1.0356260	-	-	-	hypothetical protein	1.409182	3.069151	1.0552071	2521	Predicted archaeal methyltransferase	R	conserved hypothetical protein	 0.000000e+00	 0	1.158153e-03	 3.452687e-04	 2.912962e-02	-5.908792e-03	1.150683e-01		 0	 3	FALSE	 TRUE	  9	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195420	0.6018877	U	0.4686274	0.6162291
13773	129	182411	182412	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.11903382	1.409182	3.069151	1.0552071	2521	Predicted archaeal methyltransferase	R	conserved hypothetical protein	1.516385	3.278072	1.0856938	6	Xaa-Pro aminopeptidase	E	peptidase (possible proline dipeptidase)	 4.538162e-03	 3	1.149256e-02	-2.743396e-03	-5.136896e-03	-1.930205e-01	8.509815e-01		 3	11	 TRUE	 TRUE	 10	FALSE	0.4469764	0.2932604	0.5480306	0.4469764	0.7136133	0.5411279	0.4665147	0.4503392	U	0.4686274	0.5550278
13773	129	182412	182413	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.516385	3.278072	1.0856938	6	Xaa-Pro aminopeptidase	E	peptidase (possible proline dipeptidase)	1.477688	3.117372	1.0575513	2411	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.497429e-03	 1.709002e-03	 3.174895e-02	 2.077972e-01	6.570586e-02		11	 0	FALSE	 TRUE	  9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5527898	0.6189031	U	0.4686274	0.6162291
13773	129	182413	182414	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.477688	3.117372	1.0575513	2411	Uncharacterized conserved protein	S	conserved hypothetical protein	1.573615	3.651719	1.1527003	-	-	-	hypothetical protein	 0.000000e+00	 0	9.201912e-03	 3.213895e-03	 9.449530e-02	 2.806853e-01	2.184468e-01		 0	 0	FALSE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5844983	0.5748800	U	0.4686274	0.6162291
13773	129	182414	182415	1	  -6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.573615	3.651719	1.1527003	-	-	-	hypothetical protein	1.368685	3.137294	1.0344332	2512	Uncharacterized membrane-associated protein/domain	S	hypothetical protein	 0.000000e+00	 0	4.199612e-02	-1.010868e-02	-1.180201e-01	-5.445294e-01	2.198495e+00		 0	 0	 TRUE	 TRUE	  9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3991403	0.4057490	U	0.4686274	0.6162291
13773	129	182415	182416	1	 -25	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.368685	3.137294	1.0344332	2512	Uncharacterized membrane-associated protein/domain	S	hypothetical protein	1.546856	3.301628	1.0920836	-	-	-	hypothetical protein	 0.000000e+00	 0	3.174485e-02	-7.895535e-03	-6.580746e-02	-4.925960e-01	1.974640e+00		 0	 0	 TRUE	 TRUE	 10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4057367	0.4084093	U	0.4686274	0.6162291
13773	129	182416	182417	1	 210	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.546856	3.301628	1.0920836	-	-	-	hypothetical protein	1.381275	3.525813	1.1965049	-	-	-	hypothetical protein	 0.000000e+00	 0	2.741721e-02	-6.693704e-03	-6.818461e-02	-4.220640e-01	1.714231e+00		 0	 0	FALSE	 TRUE	  9	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4148039	0.4120551	U	0.4686274	0.6162291
13773	129	182417	182418	1	 -21	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.381275	3.525813	1.1965049	-	-	-	hypothetical protein	1.400154	3.149003	1.0817517	-	-	-	hypothetical protein	 0.000000e+00	 0	3.564307e-04	 3.592750e-03	 5.692677e-02	 2.418717e-01	2.332477e-02		 0	 0	 TRUE	 TRUE	 10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5658236	0.6361047	U	0.4686274	0.6162291
13773	129	182418	182419	1	  13	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.400154	3.149003	1.0817517	-	-	-	hypothetical protein	1.459439	3.130208	1.0571074	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	 0.000000e+00	 0	3.514718e-03	-4.122881e-04	 9.414303e-03	-7.469568e-02	3.583442e-01		 0	 6	FALSE	 TRUE	  9	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4998308	0.5224252	U	0.4686274	0.6162291
13773	129	182419	182420	1	 209	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.459439	3.130208	1.0571074	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	1.455737	3.467553	1.0883132	-	-	-	paREP10	 0.000000e+00	 0	1.371048e-05	 3.495100e-05	 2.102984e-02	 2.435433e-02	1.592641e-03		 6	 0	 TRUE	 TRUE	 10	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174041	0.6508783	U	0.4686274	0.6162291
13773	129	182420	182421	1	  -6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.455737	3.467553	1.0883132	-	-	-	paREP10	1.320508	2.924148	1.0120772	-	-	-	hypothetical protein	 0.000000e+00	 0	1.828664e-02	-5.685181e-04	 5.754616e-02	-1.230368e-01	1.067091e+00		 0	 0	FALSE	 TRUE	  9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4842681	0.4350139	U	0.4686274	0.6162291
13773	129	182421	182422	1	  73	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.320508	2.924148	1.0120772	-	-	-	hypothetical protein	1.381246	2.989644	1.0352873	1573	Uracil-DNA glycosylase	L	uracil DNA glycosylase (Pa-UDGa)	 0.000000e+00	 0	3.689025e-03	 9.181163e-03	 9.707870e-02	 5.148300e-01	1.029115e-01		 0	19	FALSE	 TRUE	  8	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6800332	0.6052131	U	0.4686274	0.6162291
13773	129	182422	182423	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.381246	2.989644	1.0352873	1573	Uracil-DNA glycosylase	L	uracil DNA glycosylase (Pa-UDGa)	1.477034	3.252771	1.0508144	-	-	-	hypothetical protein	 0.000000e+00	 0	9.175469e-03	-1.798682e-03	-1.111925e-02	-1.936678e-01	8.312737e-01		19	 0	 TRUE	 TRUE	  9	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4662336	0.4519213	U	0.4686274	0.6162291
13773	129	182423	182424	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.477034	3.252771	1.0508144	-	-	-	hypothetical protein	1.485731	3.425574	1.1641295	3356	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	7.563048e-05	 8.804844e-04	 3.235722e-02	 1.393684e-01	5.889944e-03		 0	 0	 TRUE	 TRUE	 10	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5272388	0.6456836	U	0.4686274	0.6162291
13773	129	182424	182425	1	  92	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.485731	3.425574	1.1641295	3356	Predicted membrane protein	S	conserved hypothetical protein	1.461345	3.115790	1.0794130	468	RecA/RadA recombinase	L	DNA repair protein radA	 0.000000e+00	 0	5.946783e-04	 3.417377e-04	 2.199055e-02	 7.873206e-02	4.987664e-02		 0	12	 TRUE	 TRUE	 11	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177944	0.6238995	U	0.4686274	0.6162291
13773	129	182425	182426	1	 -54	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.461345	3.115790	1.0794130	468	RecA/RadA recombinase	L	DNA repair protein radA	1.430551	3.328777	1.1250653	-	-	-	hypothetical protein	 0.000000e+00	 0	9.482911e-04	-2.074243e-04	 1.916406e-02	-2.074203e-02	8.958605e-02		12	 0	 TRUE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5150814	0.6110830	U	0.4686274	0.6162291
13773	129	182426	182427	1	 104	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.430551	3.328777	1.1250653	-	-	-	hypothetical protein	1.433432	3.069128	1.0843823	1032	Fe-S oxidoreductase	C	conserved hypothetical protein	 0.000000e+00	 0	8.303983e-06	 3.743374e-04	 2.483059e-02	 7.861897e-03	1.357043e-03		 0	 5	FALSE	 TRUE	 11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191311	0.6512883	U	0.4686274	0.6162291
13773	129	182427	182428	1	 -32	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.433432	3.069128	1.0843823	1032	Fe-S oxidoreductase	C	conserved hypothetical protein	1.540226	3.494127	1.1356829	-	-	-	hypothetical protein	 0.000000e+00	 0	1.140496e-02	-1.595497e-03	 2.130373e-02	-5.154526e-02	6.188122e-01		 5	 0	 TRUE	 TRUE	 12	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5064205	0.4748312	U	0.4686274	0.6162291
13773	129	182428	182429	1	  46	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.540226	3.494127	1.1356829	-	-	-	hypothetical protein	1.382430	2.779540	0.9535519	-	-	-	hypothetical protein containing 3 C2H2 zinc finger motifs	 0.000000e+00	 0	2.489956e-02	-6.126176e-03	-5.885406e-02	-4.041367e-01	1.638714e+00		 0	 0	FALSE	 TRUE	 11	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4186761	0.4137816	U	0.4686274	0.6162291
13773	129	182429	182430	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.382430	2.779540	0.9535519	-	-	-	hypothetical protein containing 3 C2H2 zinc finger motifs	1.435331	3.235435	1.0851104	575	CDP-diglyceride synthetase	I	conserved hypothetical protein	 0.000000e+00	 0	2.798527e-03	 1.107634e-03	 2.226610e-02	 3.299075e-02	2.573440e-01		 0	12	 TRUE	 TRUE	 12	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174985	0.5597228	U	0.4686274	0.6162291
13773	129	182430	182431	1	  31	Same	+	+	 0.000000	0	  0.000000	 -0.04082199	1.435331	3.235435	1.0851104	575	CDP-diglyceride synthetase	I	conserved hypothetical protein	1.480693	3.181112	1.0807664	1436	Archaeal/vacuolar-type H+-ATPase subunit F	C	H+-transporting ATP synthase subunit F (atpF)	 2.507089e-02	 1	2.057671e-03	-4.706015e-04	 1.676034e-02	-2.162081e-02	1.840496e-01	0	12	 1	 TRUE	 TRUE	 13	 TRUE	0.4469764	0.3084868	0.5480306	0.4469764	0.6329203	0.7074534	0.5146053	0.5841817	N	0.5492530	0.5685144
13773	129	182431	182432	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.480693	3.181112	1.0807664	1436	Archaeal/vacuolar-type H+-ATPase subunit F	C	H+-transporting ATP synthase subunit F (atpF)	1.473877	3.271322	1.0912879	1390	Archaeal/vacuolar-type H+-ATPase subunit E	C	conserved hypothetical protein	 0.000000e+00	 0	4.645702e-05	 6.587920e-04	 2.754413e-02	 1.129403e-01	4.356203e-03	C	 1	 0	 TRUE	 TRUE	 14	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5203215	0.6468997	Y	1.4497162	0.7118045
13773	129	182432	182433	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.473877	3.271322	1.0912879	1390	Archaeal/vacuolar-type H+-ATPase subunit E	C	conserved hypothetical protein	1.430018	3.137657	1.1121859	1155	Archaeal/vacuolar-type H+-ATPase subunit A	C	H+-transporting ATP synthase subunit A (atpA)	 0.000000e+00	 0	1.923657e-03	-4.806068e-04	 1.499478e-02	-3.554228e-02	1.775235e-01	C	 0	20	 TRUE	 TRUE	 15	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5105544	0.5856408	Y	1.4497162	0.7118045
13773	129	182433	182434	1	  72	Same	+	+	 0.000000	0	  0.000000	 -0.50595881	1.430018	3.137657	1.1121859	1155	Archaeal/vacuolar-type H+-ATPase subunit A	C	H+-transporting ATP synthase subunit A (atpA)	1.467477	3.379035	1.1349873	2012	DNA-directed RNA polymerase, subunit H, RpoH/RPB5	K	DNA-directed RNA polymerase subunit H (rpoH)	 1.002631e-01	 8	1.403188e-03	-3.437974e-04	 1.621455e-02	-2.855916e-02	1.306631e-01	0	20	 8	 TRUE	 TRUE	 16	 TRUE	0.4469764	0.2345012	0.5480306	0.4469764	0.7652913	1.0147250	0.5125343	0.5980793	N	0.5492530	0.5452573
13773	129	182434	182435	1	  35	Same	+	+	 5.252855	0	  5.252855	  5.25285499	1.467477	3.379035	1.1349873	2012	DNA-directed RNA polymerase, subunit H, RpoH/RPB5	K	DNA-directed RNA polymerase subunit H (rpoH)	1.401497	3.062589	1.1034570	85	DNA-directed RNA polymerase, beta subunit/140 kD subunit	K	DNA-directed RNA polymerase subunit B (rpoB)	 2.159066e-02	 5	4.353326e-03	-8.025189e-04	 1.701982e-02	-9.882973e-02	4.205567e-01	K	 8	 5	 TRUE	 TRUE	 17	 TRUE	2.8074821	1.7735348	0.5480306	2.8807799	0.7448207	0.6890474	0.4917185	0.5086682	Y	1.4497162	0.9042173
13773	129	182435	182436	1	  81	Same	+	+	10.271458	0	 18.468344	 18.46834435	1.401497	3.062589	1.1034570	85	DNA-directed RNA polymerase, beta subunit/140 kD subunit	K	DNA-directed RNA polymerase subunit B (rpoB)	1.461352	3.145309	1.0931112	86	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	K	DNA-directed RNA polymerase subunit A' (rpoA1)	 6.125049e-02	 5	3.582643e-03	-4.969292e-04	 8.856990e-03	-7.745276e-02	3.546783e-01	K	 5	15	 TRUE	 TRUE	 18	 TRUE	2.6699663	1.9069313	0.5480306	2.6213427	0.7448207	0.8869692	0.4989522	0.5237241	Y	1.4497162	0.9192352
13773	129	182436	182437	1	  -3	Same	+	+	18.587903	0	 29.054334	 29.05433401	1.461352	3.145309	1.0931112	86	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	K	DNA-directed RNA polymerase subunit A' (rpoA1)	1.479372	3.300530	1.1238339	86	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	K	DNA-directed RNA polymerase subunit A'' (rpoA2)	 1.911116e-01	10	3.247026e-04	 2.786503e-04	 2.573182e-02	 6.905959e-02	2.824876e-02	K	15	10	 TRUE	 TRUE	 19	 TRUE	2.4427799	1.9604677	0.5480306	2.4566331	0.7739415	1.1342961	0.5181514	0.6339124	Y	1.4497162	0.9261075
13773	129	182437	182438	1	  42	Same	+	+	18.587903	0	 29.054334	 29.05433401	1.479372	3.300530	1.1238339	86	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	K	DNA-directed RNA polymerase subunit A'' (rpoA2)	1.442267	3.166333	1.0353452	1911	Ribosomal protein L30E	J	ribosomal protein L30	 2.824945e-01	10	1.376742e-03	-2.553247e-04	 1.597588e-02	 3.314861e-03	1.230109e-01	0	10	10	 TRUE	 TRUE	 20	 TRUE	2.4427799	1.9604677	0.5480306	2.4566331	0.7739415	1.2156130	0.5196876	0.6000329	N	0.5492530	0.8940859
13773	129	182438	182439	1	  -7	Same	+	+	22.613255	0	 33.079686	 33.07968570	1.442267	3.166333	1.0353452	1911	Ribosomal protein L30E	J	ribosomal protein L30	1.427963	3.018300	1.0258867	195	Transcription elongation factor	K	transcription termination factor NusA, putative	 3.229691e-01	10	2.046084e-04	 2.138117e-04	 2.442023e-02	-1.279296e-03	2.193945e-02	0	10	12	 TRUE	 TRUE	 21	 TRUE	2.2795894	1.9957100	0.5480306	2.3656937	0.7739415	1.2322996	0.5199861	0.6367684	N	0.5492530	0.9000975
13773	129	182439	182440	1	  40	Same	+	+	25.178204	0	 35.644635	 35.57052708	1.427963	3.018300	1.0258867	195	Transcription elongation factor	K	transcription termination factor NusA, putative	1.517977	3.220900	1.0705886	48	Ribosomal protein S12	J	ribosomal protein S12	 2.494397e-01	12	8.102452e-03	-1.560045e-03	 1.236182e-02	-8.454013e-02	5.587649e-01	0	12	21	 TRUE	 TRUE	 22	 TRUE	2.2337636	2.0043252	0.5480306	2.3298499	0.7776747	1.1893544	0.4969205	0.4827099	N	0.5492530	0.9015855
13773	129	182440	182441	1	   0	Same	+	+	 0.000000	0	  0.000000	 -0.92112870	1.517977	3.220900	1.0705886	48	Ribosomal protein S12	J	ribosomal protein S12	1.611317	3.524142	1.0447276	202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	K	DNA-directed RNA polymerase subunit D (rpoD)	 1.996510e-01	10	8.712443e-03	 1.064838e-02	 1.989327e-01	 5.399359e-01	7.761120e-02	0	21	10	 TRUE	 TRUE	 23	 TRUE	0.4469764	0.2135106	0.5480306	0.4469764	0.7739415	1.1405219	0.6927097	0.6156404	N	0.5492530	0.5386183
13773	129	182441	182442	1	  26	Same	+	+	17.903724	0	 26.172931	 25.93630402	1.611317	3.524142	1.0447276	202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	K	DNA-directed RNA polymerase subunit D (rpoD)	1.675620	3.718358	1.1107052	1727	Ribosomal protein L18E	J	ribosomal protein L18	 2.561589e-01	10	4.134875e-03	 3.585940e-02	 5.027470e-01	 8.470116e-01	4.561173e-03	0	10	11	 TRUE	 TRUE	 24	 TRUE	2.4985447	1.9424973	0.5480306	2.5004783	0.7739415	1.1936934	0.7936739	0.6466721	N	0.5492530	0.8912296
13773	129	182442	182443	1	  -3	Same	+	+	 2.856470	0	  2.856470	  2.85647021	1.675620	3.718358	1.1107052	1727	Ribosomal protein L18E	J	ribosomal protein L18	1.559078	3.416298	1.0931771	102	Ribosomal protein L13	J	ribosomal protein L13	 2.013490e-03	 4	1.358202e-02	 2.414600e-02	 2.048269e-01	 7.371053e-01	3.336300e-02	J	11	 4	 TRUE	 TRUE	 25	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.7323301	0.4971904	0.7639694	0.6308211	Y	1.4497162	0.8983990
13773	129	182443	182444	1	   3	Same	+	+	 9.921229	0	  9.921229	  9.92122923	1.559078	3.416298	1.0931771	102	Ribosomal protein L13	J	ribosomal protein L13	1.481957	3.186751	1.0628071	103	Ribosomal protein S9	J	ribosomal protein S9	 1.076711e-02	 4	5.947705e-03	 3.291298e-03	 3.214427e-02	 2.944866e-01	1.525973e-01	J	 4	61	 TRUE	 TRUE	 26	 TRUE	2.6834842	1.8372876	0.5480306	2.7639756	0.7323301	0.6051389	0.5906193	0.5925944	Y	1.4497162	0.9122634
13773	129	182444	182445	1	  -3	Same	+	+	18.327019	0	 26.000242	 26.00024212	1.481957	3.186751	1.0628071	103	Ribosomal protein S9	J	ribosomal protein S9	1.670931	3.630324	1.1398977	1644	DNA-directed RNA polymerase, subunit N (RpoN/RPB10)	K	DNA-directed RNA polymerase subunit N (rpoN)	 3.478049e-03	10	3.571126e-02	 6.709971e-03	 2.192171e-01	 3.629855e-01	3.251538e-01	0	61	10	 TRUE	 TRUE	 27	 TRUE	2.4649028	1.9446050	0.5480306	2.5155966	0.7739415	0.5249581	0.6164480	0.5328194	N	0.5492530	0.8918925
13773	129	182445	182446	1	  51	Same	+	+	 0.000000	0	  0.000000	 -0.47773506	1.670931	3.630324	1.1398977	1644	DNA-directed RNA polymerase, subunit N (RpoN/RPB10)	K	DNA-directed RNA polymerase subunit N (rpoN)	1.529164	3.474018	1.0997856	1958	Small nuclear ribonucleoprotein (snRNP) homolog	K	small nuclear ribonucleoprotein homolog (Sm-like)	 1.536325e-01	 5	2.009794e-02	 1.707372e-02	 1.133313e-01	 6.405196e-01	7.761120e-02	K	10	 5	 TRUE	 TRUE	 28	 TRUE	0.4469764	0.2362422	0.5480306	0.4469764	0.7448207	1.0896394	0.7335863	0.6156404	Y	1.4497162	0.6408257
13773	129	182446	182447	1	  -3	Same	+	+	 2.856470	0	  5.519058	  5.17283251	1.529164	3.474018	1.0997856	1958	Small nuclear ribonucleoprotein (snRNP) homolog	K	small nuclear ribonucleoprotein homolog (Sm-like)	1.586811	3.346168	1.0734790	1812	Archaeal S-adenosylmethionine synthetase	E	S-adenosylmethionine synthetase	 1.081314e-01	 5	3.323241e-03	 1.053164e-02	 1.750868e-01	 5.671698e-01	2.876708e-02	0	 5	17	 TRUE	 TRUE	 29	 TRUE	2.8950318	1.7696075	0.5480306	2.8617306	0.7448207	1.0410001	0.7059525	0.6337043	N	0.5492530	0.8622286
13773	129	182447	182448	1	  -3	Convergent	+	-	 2.856470	0	  2.856470	  2.65412978	1.586811	3.346168	1.0734790	1812	Archaeal S-adenosylmethionine synthetase	E	S-adenosylmethionine synthetase	1.534233	3.314624	1.0923695	2433	Uncharacterized conserved protein	S	conserved hypothetical protein	 6.260434e-02	 3	2.764466e-03	 1.121813e-02	 1.227607e-01	 5.859246e-01	2.171269e-02		17	 3	 TRUE	 TRUE	 30	FALSE	2.8950318	1.7019611	0.5480306	2.9213001	0.7136133	0.8950258	0.7156244	0.6368386	U	0.4686274	0.8471407
13773	129	182448	182449	1	   4	Same	-	-	 4.709530	0	  4.709530	  4.70953020	1.534233	3.314624	1.0923695	2433	Uncharacterized conserved protein	S	conserved hypothetical protein	1.507550	3.268900	1.0491751	478	RIO-like serine/threonine protein kinase fused to N-terminal HTH domain	T	conserved hypothetical protein	 3.883766e-02	 3	7.119725e-04	 4.652117e-03	 6.571287e-02	 3.858137e-01	1.972483e-02		 3	 8	FALSE	 TRUE	 29	 TRUE	2.8468194	1.7578659	0.5480306	2.8992734	0.7136133	0.7951321	0.6279314	0.6377141	U	0.4686274	0.8568728
13773	129	182449	182450	1	  32	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.507550	3.268900	1.0491751	478	RIO-like serine/threonine protein kinase fused to N-terminal HTH domain	T	conserved hypothetical protein	1.603785	3.508340	1.1084712	1860	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	9.261108e-03	 8.557980e-03	 1.717672e-01	 4.833318e-01	9.997827e-02		 8	 0	FALSE	 TRUE	 28	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6675957	0.6068453	U	0.4686274	0.6162291
13773	129	182450	182451	1	 153	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.603785	3.508340	1.1084712	1860	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.506131	3.243251	1.0491179	615	Cytidylyltransferase	MI	cytidyltransferase	 0.000000e+00	 0	9.536330e-03	 8.341662e-03	 6.690375e-02	 4.726356e-01	1.078944e-01		 0	 3	 TRUE	 TRUE	 29	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6634656	0.6036927	U	0.4686274	0.6162291
13773	129	182451	182452	1	 -19	Same	+	+	 0.000000	0	  0.000000	 -0.26504093	1.506131	3.243251	1.0491179	615	Cytidylyltransferase	MI	cytidyltransferase	1.528404	3.437596	1.1448441	1515	Deoxyinosine 3'endonuclease (endonuclease V)	L	DNA endonuclease V, conjectural	 7.475750e-02	 3	4.960679e-04	 4.215419e-03	 7.747745e-02	 3.635338e-01	1.623033e-02		 3	13	 TRUE	 TRUE	 30	 TRUE	0.4469764	0.2605979	0.5480306	0.4469764	0.7136133	0.9356931	0.6167280	0.6396093	U	0.4686274	0.5447277
13773	129	182452	182453	1	 -35	Convergent	+	-	 0.000000	0	  0.000000	 -0.14066733	1.528404	3.437596	1.1448441	1515	Deoxyinosine 3'endonuclease (endonuclease V)	L	DNA endonuclease V, conjectural	1.455859	3.313309	1.1106567	589	Universal stress protein UspA and related nucleotide-binding proteins	T	conserved protein (probable universal stress protein homolog)	 9.761268e-03	13	5.262697e-03	 3.439481e-04	 9.748957e-03	 9.255458e-02	2.828640e-01	0	13	21	 TRUE	 TRUE	 31	FALSE	0.4469764	0.2780518	0.5480306	0.4469764	0.7781369	0.5967066	0.5179259	0.5499819	N	0.5492530	0.5589778
13773	129	182453	182454	1	   9	Same	-	-	 0.000000	0	  0.000000	 -0.41836851	1.455859	3.313309	1.1106567	589	Universal stress protein UspA and related nucleotide-binding proteins	T	conserved protein (probable universal stress protein homolog)	1.456185	3.646183	1.2198697	395	ABC-type sugar transport system, permease component	G	multiple sugar transport permease protein	 9.566906e-07	 7	1.061961e-07	 2.140274e-05	 2.099560e-02	 1.950749e-02	9.423910e-06	0	21	 7	FALSE	 TRUE	 30	 TRUE	0.4469764	0.2396649	0.5480306	0.4469764	0.7596462	0.4385512	0.5177085	0.6557762	N	0.5492530	0.5468881
13773	129	182454	182455	1	  -3	Same	-	-	10.796698	0	 10.796698	 10.79669797	1.456185	3.646183	1.2198697	395	ABC-type sugar transport system, permease component	G	multiple sugar transport permease protein	1.534772	3.792910	1.1450516	1175	ABC-type sugar transport systems, permease components	G	multiple sugar transport permease protein	 8.290044e-02	 7	6.175893e-03	 3.995617e-04	 4.300596e-02	 9.840447e-02	3.087367e-01	G	 7	 7	FALSE	 TRUE	 29	 TRUE	2.6465843	1.8555306	0.5480306	2.7405335	0.7596462	0.9554719	0.5184479	0.5390834	Y	1.4497162	0.9144646
13773	129	182455	182456	1	  -3	Same	-	-	 5.341377	0	  5.341377	  5.34137686	1.534772	3.792910	1.1450516	1175	ABC-type sugar transport systems, permease components	G	multiple sugar transport permease protein	1.448880	3.278508	1.1202205	1653	ABC-type sugar transport system, periplasmic component	G	multiple sugar binding protein	 2.545656e-02	 6	7.377397e-03	-2.095152e-04	 6.492144e-04	 5.027185e-02	3.902653e-01	G	 7	 6	FALSE	 TRUE	 28	 TRUE	2.8043759	1.7755009	0.5480306	2.8785340	0.7537284	0.7135383	0.5187825	0.5139757	Y	1.4497162	0.9044674
13773	129	182456	182457	1	 351	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.448880	3.278508	1.1202205	1653	ABC-type sugar transport system, periplasmic component	G	multiple sugar binding protein	1.304477	2.760473	0.9599884	515	Serine/threonine protein kinase	RTKL	hypothetical protein with partial (eukaryotic) protein kinase domain	 0.000000e+00	 0	2.085222e-02	 3.691709e-04	 7.985149e-02	-6.737978e-02	1.012317e+00		 6	 0	FALSE	 TRUE	 27	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5016752	0.4385224	U	0.4686274	0.6162291
13773	129	182457	182458	1	 988	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.304477	2.760473	0.9599884	515	Serine/threonine protein kinase	RTKL	hypothetical protein with partial (eukaryotic) protein kinase domain	1.417163	3.172757	1.0971227	2888	Predicted Zn-ribbon RNA-binding protein with a function in translation	J	conserved hypothetical protein	 0.000000e+00	 0	1.269816e-02	 5.028880e-03	 2.769885e-02	 2.279444e-01	4.760259e-01		 0	 5	FALSE	 TRUE	 26	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5611667	0.4973638	U	0.4686274	0.6162291
13773	129	182458	182459	1	  49	Same	+	+	 8.260148	0	 10.922736	 10.92273592	1.417163	3.172757	1.0971227	2888	Predicted Zn-ribbon RNA-binding protein with a function in translation	J	conserved hypothetical protein	1.457872	3.114651	1.0767286	2092	Translation elongation factor EF-1beta	J	translation elongation factor aEF-1 beta subunit	 1.764724e-01	 4	1.657209e-03	-2.217792e-04	 1.527572e-02	-3.783464e-02	1.592641e-01	J	 5	 4	 TRUE	 TRUE	 27	 TRUE	2.7009158	1.8575661	0.5480306	2.7323856	0.7323301	1.1158155	0.5095597	0.5901897	Y	1.4497162	0.9141400
13773	129	182459	182460	1	  37	Same	+	+	 2.856470	0	  5.519058	  5.44109649	1.457872	3.114651	1.0767286	2092	Translation elongation factor EF-1beta	J	translation elongation factor aEF-1 beta subunit	1.405790	3.072276	1.0841143	464	ATPases of the AAA+ class	O	AAA family ATPase, possible cell division control protein cdc48	 6.873549e-02	 4	2.712519e-03	-2.954666e-04	 2.245758e-02	-5.484834e-02	2.589037e-01	0	 4	 8	 TRUE	 TRUE	 28	 TRUE	2.8950318	1.7794383	0.5480306	2.8617306	0.7323301	0.9113849	0.5053493	0.5586400	N	0.5492530	0.8637098
13773	129	182460	182461	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405790	3.072276	1.0841143	464	ATPases of the AAA+ class	O	AAA family ATPase, possible cell division control protein cdc48	1.374202	3.030051	1.0265470	-	-	-	hypothetical protein	 0.000000e+00	 0	9.978250e-04	 3.520121e-03	 7.174632e-02	 2.248239e-01	7.933107e-02		 8	 0	 TRUE	 TRUE	 29	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5594899	0.6149078	U	0.4686274	0.6162291
13773	129	182461	182462	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.374202	3.030051	1.0265470	-	-	-	hypothetical protein	1.458238	3.234157	1.1037918	258	5'-3' exonuclease (including N-terminal domain of PolI)	L	DNA endonuclease rad2 homolog	 0.000000e+00	 0	7.062111e-03	-5.283956e-04	-4.530298e-04	-9.997591e-02	6.285094e-01		 0	12	 TRUE	 TRUE	 30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4911487	0.4734023	U	0.4686274	0.6162291
13773	129	182462	182463	1	 100	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.458238	3.234157	1.1037918	258	5'-3' exonuclease (including N-terminal domain of PolI)	L	DNA endonuclease rad2 homolog	1.416936	2.937037	1.0414794	-	-	-	hypothetical protein	 0.000000e+00	 0	1.705894e-03	-2.358695e-04	 2.087599e-02	-3.875878e-02	1.629606e-01		12	 0	 TRUE	 TRUE	 31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5094264	0.5893580	U	0.4686274	0.6162291
13773	129	182463	182464	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.416936	2.937037	1.0414794	-	-	-	hypothetical protein	1.493940	3.158960	1.0693755	2518	Protein-L-isoaspartate carboxylmethyltransferase	O	protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	 0.000000e+00	 0	5.929644e-03	-1.466050e-03	 5.178214e-03	-1.145747e-01	5.061400e-01		 0	25	 TRUE	 TRUE	 32	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4867505	0.4920423	U	0.4686274	0.6162291
13773	129	182464	182465	1	  49	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.493940	3.158960	1.0693755	2518	Protein-L-isoaspartate carboxylmethyltransferase	O	protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	1.588435	3.511747	1.1141816	-	-	-	hypothetical protein	 0.000000e+00	 0	8.929333e-03	 5.830733e-03	 1.320085e-01	 3.936945e-01	1.454869e-01		25	 0	 TRUE	 TRUE	 33	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6314933	0.5941308	U	0.4686274	0.6162291
13773	129	182465	182466	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.588435	3.511747	1.1141816	-	-	-	hypothetical protein	1.473173	3.170192	1.0708623	17	Aspartyl/asparaginyl-tRNA synthetases	J	aspartyl-tRNA synthetase	 0.000000e+00	 0	1.328523e-02	 2.984856e-03	 9.148815e-03	 2.514187e-01	3.019515e-01		 0	16	 TRUE	 TRUE	 34	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5697142	0.5408188	U	0.4686274	0.6162291
13773	129	182466	182467	1	  29	Same	-	-	 5.689684	0	  8.352271	  8.17005866	1.473173	3.170192	1.0708623	17	Aspartyl/asparaginyl-tRNA synthetases	J	aspartyl-tRNA synthetase	1.438518	3.297946	1.0985380	195	Transcription elongation factor	K	conserved hypothetical protein	 8.869744e-02	 4	1.201012e-03	-2.804259e-04	 1.667511e-02	-8.889693e-03	1.068883e-01	0	16	 4	FALSE	 TRUE	 33	 TRUE	2.7798012	1.8211872	0.5480306	2.7963516	0.7323301	0.9756975	0.5189598	0.6041306	N	0.5492530	0.8714599
13773	129	182467	182468	1	  56	Divergent	-	+	 0.000000	0	  0.000000	 -0.24283734	1.438518	3.297946	1.0985380	195	Transcription elongation factor	K	conserved hypothetical protein	1.477808	3.210964	1.1189925	1031	Uncharacterized Fe-S oxidoreductase	C	conserved hypothetical protein	 2.516522e-02	 4	1.543741e-03	-3.400998e-04	 1.811219e-02	-1.038279e-02	1.419954e-01	0	 4	 9	FALSE	 TRUE	 32	FALSE	0.4469764	0.2674215	0.5480306	0.4469764	0.7323301	0.7110956	0.5183971	0.5953411	N	0.5492530	0.5556362
13773	129	182468	182469	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.477808	3.210964	1.1189925	1031	Uncharacterized Fe-S oxidoreductase	C	conserved hypothetical protein	1.457843	3.459005	1.0962705	-	-	-	hypothetical protein	 0.000000e+00	 0	3.986003e-04	 1.703912e-04	 2.106361e-02	 5.324509e-02	3.740350e-02		 9	 0	 TRUE	 TRUE	 33	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187741	0.6288792	U	0.4686274	0.6162291
13773	129	182469	182470	1	  30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.457843	3.459005	1.0962705	-	-	-	hypothetical protein	1.345140	2.997902	1.0624215	1990	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.270206e-02	-6.853789e-04	 4.128867e-02	-1.242778e-01	9.276809e-01		 0	12	FALSE	 TRUE	 32	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4837903	0.4451969	U	0.4686274	0.6162291
13773	129	182470	182471	1	  68	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.345140	2.997902	1.0624215	1990	Uncharacterized conserved protein	S	conserved hypothetical protein	1.377894	3.092691	1.1020822	1404	Subtilisin-like serine proteases	O	surface layer-associated STABLE protease, conjectural	 2.507089e-02	 1	1.072845e-03	 7.809451e-03	 9.709626e-02	 4.865477e-01	4.357616e-02		12	 1	FALSE	 TRUE	 31	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7074534	0.6689872	0.6264906	U	0.4686274	0.5517368
13773	129	182471	182472	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.377894	3.092691	1.1020822	1404	Subtilisin-like serine proteases	O	surface layer-associated STABLE protease, conjectural	1.378067	2.960785	0.9600185	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase (mutT/nudix family protein)	 1.851224e-04	 1	2.995893e-08	 5.389331e-03	 8.368672e-02	 3.597224e-01	5.300950e-06		 1	 1	 TRUE	 TRUE	 32	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4421536	0.6156101	0.6558673	U	0.4686274	0.6162291
13773	129	182472	182473	1	  39	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.378067	2.960785	0.9600185	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase (mutT/nudix family protein)	1.556987	3.421709	1.0592727	-	-	-	hypothetical protein	 0.000000e+00	 0	3.201242e-02	-7.742783e-03	-5.513105e-02	-4.580374e-01	1.859885e+00		 1	 0	FALSE	 TRUE	 31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4106426	0.4101998	U	0.4686274	0.6162291
13773	129	182473	182474	1	 121	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.556987	3.421709	1.0592727	-	-	-	hypothetical protein	1.497439	3.252468	1.1152715	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	succinate dehydrogenase flavoprotein subunit (sdhA)	 0.000000e+00	 0	3.546028e-03	 4.862213e-03	 5.465634e-02	 3.746511e-01	7.591019e-02		 0	53	FALSE	 TRUE	 30	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6224034	0.6161199	U	0.4686274	0.6162291
13773	129	182474	182475	1	   2	Same	+	+	49.470850	0	126.457846	124.95876164	1.497439	3.252468	1.1152715	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	succinate dehydrogenase flavoprotein subunit (sdhA)	1.544686	3.292449	1.0205997	479	Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit	C	succinate dehydrogenase iron-sulfur subunit (sdhB)	 1.894379e-01	37	2.232324e-03	 4.295798e-03	 8.768407e-02	 3.566137e-01	5.696813e-02	C	53	37	 TRUE	 TRUE	 31	 TRUE	2.0596879	2.0764720	0.5480306	2.0452694	0.7740003	1.1301638	0.6150533	0.6214366	Y	1.4497162	0.9384094
13773	129	182475	182476	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.544686	3.292449	1.0205997	479	Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit	C	succinate dehydrogenase iron-sulfur subunit (sdhB)	1.519127	3.579199	1.1084342	2009	Succinate dehydrogenase/fumarate reductase, cytochrome b subunit	C	succinate dehydrogenase cytochrome b subunit (sdhC)	 9.459415e-03	 1	6.532584e-04	 6.319200e-03	 8.417167e-02	 4.477235e-01	1.290133e-02	C	37	 1	 TRUE	 TRUE	 32	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5912015	0.6550709	0.6415107	Y	1.4497162	0.7118045
13773	129	182476	182477	1	  -9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.519127	3.579199	1.1084342	2009	Succinate dehydrogenase/fumarate reductase, cytochrome b subunit	C	succinate dehydrogenase cytochrome b subunit (sdhC)	1.411995	3.150073	1.1135566	-	-	-	succinate dehydrogenase subunit D (sdhD)	 0.000000e+00	 0	1.147740e-02	-2.668608e-03	-1.817380e-02	-1.802217e-01	8.242912e-01		 1	 0	 TRUE	 TRUE	 33	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4703678	0.4526824	U	0.4686274	0.6162291
13773	129	182477	182478	1	  78	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.411995	3.150073	1.1135566	-	-	-	succinate dehydrogenase subunit D (sdhD)	1.461261	3.259644	1.0396403	592	DNA polymerase sliding clamp subunit (PCNA homolog)	L	proliferating-cell nuclear antigen homolog (PCNA)	 0.000000e+00	 0	2.427195e-03	-3.888017e-04	 1.249720e-02	-5.534898e-02	2.322900e-01		 0	 0	 TRUE	 TRUE	 34	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5052041	0.5700736	U	0.4686274	0.6162291
13773	129	182478	182479	1	  94	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.461261	3.259644	1.0396403	592	DNA polymerase sliding clamp subunit (PCNA homolog)	L	proliferating-cell nuclear antigen homolog (PCNA)	1.481723	3.215559	1.0810318	2025	Electron transfer flavoprotein, alpha subunit	C	electron transfer flavoprotein alpha subunit (etfA)	 0.000000e+00	 0	4.186927e-04	 2.993189e-04	 2.632629e-02	 7.157696e-02	3.622551e-02	0	 0	27	FALSE	 TRUE	 33	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180132	0.6294602	N	0.5492530	0.6245624
13773	129	182479	182480	1	   4	Same	-	-	14.647654	0	 20.616646	 20.45999205	1.481723	3.215559	1.0810318	2025	Electron transfer flavoprotein, alpha subunit	C	electron transfer flavoprotein alpha subunit (etfA)	1.511412	3.362528	1.0919442	2086	Electron transfer flavoprotein, beta subunit	C	electron transfer flavoprotein beta subunit (etfB)	 1.063920e-01	13	8.814143e-04	 1.820414e-03	 4.883436e-02	 2.167676e-01	3.710724e-02	C	27	13	FALSE	 TRUE	 32	 TRUE	2.5807442	1.9173401	0.5480306	2.5842504	0.7781369	1.0296554	0.5558901	0.6290639	Y	1.4497162	0.9210227
13773	129	182480	182481	1	   5	Same	-	-	 7.375256	0	 11.957953	 11.63959703	1.511412	3.362528	1.0919442	2086	Electron transfer flavoprotein, beta subunit	C	electron transfer flavoprotein beta subunit (etfB)	1.563979	3.134248	1.0070269	2440	Ferredoxin-like protein	C	ferredoxin like protein	 1.299447e-01	 9	2.763312e-03	 6.757341e-03	 1.227884e-01	 4.506485e-01	4.683919e-02	C	13	 9	FALSE	 TRUE	 31	 TRUE	2.7415630	1.8636829	0.5480306	2.7069324	0.7702221	1.0660153	0.6560635	0.6252488	Y	1.4497162	0.9143559
13773	129	182481	182482	1	  -3	Same	-	-	11.431860	0	 20.776731	 19.79641869	1.563979	3.134248	1.0070269	2440	Ferredoxin-like protein	C	ferredoxin like protein	1.468039	3.287520	1.1047414	644	Dehydrogenases (flavoproteins)	C	electron transfer flavoprotein-quinone oxidoreductase	 3.262134e-01	 9	9.204442e-03	 1.874181e-03	 1.116482e-02	 1.953818e-01	2.919151e-01	C	 9	10	FALSE	 TRUE	 30	 TRUE	2.6271063	1.9152549	0.5480306	2.5732548	0.7702221	1.2401595	0.5482041	0.5460473	Y	1.4497162	0.9204092
13773	129	182482	182483	1	 227	Divergent	-	+	 0.000000	0	  0.000000	 -0.13150953	1.468039	3.287520	1.1047414	644	Dehydrogenases (flavoproteins)	C	electron transfer flavoprotein-quinone oxidoreductase	1.566953	3.232723	1.0475742	314	Molybdopterin converting factor, large subunit	H	molybdenum cofactor biosynthesis protein D/E	 2.239266e-02	 4	9.783892e-03	 1.923684e-03	 7.643922e-02	 1.970940e-01	2.994265e-01	0	10	 4	FALSE	 TRUE	 29	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7323301	0.6954998	0.5486826	0.5419791	N	0.5492530	0.5624819
13773	129	182483	182484	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.566953	3.232723	1.0475742	314	Molybdopterin converting factor, large subunit	H	molybdenum cofactor biosynthesis protein D/E	1.550522	3.342141	1.0368591	-	-	-	hypothetical protein	 0.000000e+00	 0	2.699943e-04	 1.145532e-02	 1.457180e-01	 5.912821e-01	2.643996e-03		 4	 0	 TRUE	 TRUE	 30	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7168517	0.6490066	U	0.4686274	0.6162291
13773	129	182484	182485	1	  62	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.550522	3.342141	1.0368591	-	-	-	hypothetical protein	1.507934	3.300540	1.1026331	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	 0.000000e+00	 0	1.813724e-03	 5.604816e-03	 6.943478e-02	 4.137833e-01	3.506637e-02		 0	 0	FALSE	 TRUE	 29	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6409571	0.6299706	U	0.4686274	0.6162291
13773	129	182485	182486	1	 158	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.507934	3.300540	1.1026331	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	1.529822	3.510185	1.1240768	-	-	-	hypothetical protein	 0.000000e+00	 0	4.790893e-04	 4.434437e-03	 8.008867e-02	 3.762055e-01	1.433377e-02		 0	 0	 TRUE	 TRUE	 30	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6235560	0.6407068	U	0.4686274	0.6162291
13773	129	182486	182487	1	  27	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.529822	3.510185	1.1240768	-	-	-	hypothetical protein	1.774121	3.865169	1.0810407	1321	Mn-dependent transcriptional regulator	K	transcriptional regulatory protein, conjectural	 0.000000e+00	 0	5.968212e-02	 2.531123e-02	 5.655616e-01	 6.673106e-01	9.660981e-02		 0	 0	 TRUE	 TRUE	 31	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7430736	0.6082362	U	0.4686274	0.6162291
13773	129	182487	182488	1	  68	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.774121	3.865169	1.0810407	1321	Mn-dependent transcriptional regulator	K	transcriptional regulatory protein, conjectural	1.629488	3.640615	1.0838041	-	-	-	hypothetical protein	 0.000000e+00	 0	2.091863e-02	 5.747641e-02	 5.088174e-01	 8.960596e-01	6.248642e-03		 0	 0	 TRUE	 TRUE	 32	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8037042	0.6452751	U	0.4686274	0.6162291
13773	129	182488	182489	1	  34	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.629488	3.640615	1.0838041	-	-	-	hypothetical protein	1.545998	3.281015	1.0861481	49	Ribosomal protein S7	J	ribosomal protein S7	 0.000000e+00	 0	6.970607e-03	 1.684876e-02	 1.599191e-01	 6.640317e-01	3.115780e-02		 0	10	 TRUE	 TRUE	 33	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7409004	0.6322033	U	0.4686274	0.6162291
13773	129	182489	182490	1	  31	Same	+	+	 0.000000	0	  0.000000	 -0.72456721	1.545998	3.281015	1.0861481	49	Ribosomal protein S7	J	ribosomal protein S7	1.446341	3.123984	1.0658057	470	ATPase involved in DNA replication	L	replication factor C small subunit	 2.329131e-01	 9	9.931611e-03	-4.779656e-04	-7.514997e-03	 3.255608e-02	4.717992e-01	0	10	 9	 TRUE	 TRUE	 34	 TRUE	0.4469764	0.2236322	0.5480306	0.4469764	0.7702221	1.1625725	0.5174486	0.4985726	N	0.5492530	0.5418215
13773	129	182490	182491	1	   0	Same	+	+	 8.154788	0	 10.817375	 10.46748014	1.446341	3.123984	1.0658057	470	ATPase involved in DNA replication	L	replication factor C small subunit	1.491355	3.314207	1.0856591	470	ATPase involved in DNA replication	L	replication factor C large subunit	 1.673255e-01	 9	2.026267e-03	-2.018957e-04	 2.236772e-02	 2.001874e-02	1.642022e-01	L	 9	10	 TRUE	 TRUE	 35	 TRUE	2.7051684	1.8514647	0.5480306	2.7364805	0.7702221	1.1076963	0.5176648	0.5889325	Y	1.4497162	0.9134862
13773	129	182491	182492	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.491355	3.314207	1.0856591	470	ATPase involved in DNA replication	L	replication factor C large subunit	1.579914	3.227904	0.8328345	-	-	-	hypothetical protein	 0.000000e+00	 0	7.842832e-03	 5.135964e-03	 1.186805e-01	 3.720725e-01	1.425743e-01		10	 0	 TRUE	 TRUE	 36	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6212567	0.5949759	U	0.4686274	0.6162291
13773	129	182492	182493	1	  75	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.579914	3.227904	0.8328345	-	-	-	hypothetical protein	1.573594	3.504286	1.1244681	1474	Cdc6-related protein, AAA superfamily ATPase	LO	cell division control protein 6 (cdc6), putative	 0.000000e+00	 0	3.994830e-05	 1.570549e-02	 2.003464e-01	 6.717623e-01	2.355978e-04		 0	 9	 TRUE	 TRUE	 37	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7439457	0.6542630	U	0.4686274	0.6162291
13773	129	182493	182494	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.573594	3.504286	1.1244681	1474	Cdc6-related protein, AAA superfamily ATPase	LO	cell division control protein 6 (cdc6), putative	1.676340	3.832508	1.0965121	640	Predicted transcriptional regulators	K	transcriptional regulatory protein (helix-turn-helix), putative	 1.765169e-03	 1	1.055679e-02	 2.748883e-02	 4.327245e-01	 7.758293e-01	2.059655e-02		 9	 1	 TRUE	 TRUE	 38	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4899807	0.7758723	0.6372565	U	0.4686274	0.6162291
13773	129	182494	182495	1	  17	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.676340	3.832508	1.0965121	640	Predicted transcriptional regulators	K	transcriptional regulatory protein (helix-turn-helix), putative	1.583132	3.415148	1.0717436	4998	Predicted endonuclease (RecB family)	L	conserved hypothetical protein	 0.000000e+00	 0	8.687758e-03	 2.963440e-02	 2.828026e-01	 7.978283e-01	1.451812e-02	0	 1	 0	 TRUE	 TRUE	 39	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7851838	0.6405817	N	0.5492530	0.6245624
13773	129	182495	182496	1	  75	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.583132	3.415148	1.0717436	4998	Predicted endonuclease (RecB family)	L	conserved hypothetical protein	1.506535	3.355479	1.1364279	182	Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	J	translation initiation factor aIF-2B alpha subunit	 0.000000e+00	 0	5.867113e-03	 7.264386e-03	 6.932295e-02	 4.556272e-01	8.371319e-02	0	 0	34	 TRUE	 TRUE	 40	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6587300	0.6128672	N	0.5492530	0.6245624
13773	129	182496	182497	1	 106	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.506535	3.355479	1.1364279	182	Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	J	translation initiation factor aIF-2B alpha subunit	1.669259	3.847976	1.0821173	-	-	-	hypothetical protein	 0.000000e+00	 0	2.647922e-02	 1.201363e-02	 2.740225e-01	 5.184435e-01	1.635808e-01		34	 0	 TRUE	 TRUE	 41	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6837010	0.5892311	U	0.4686274	0.6162291
13773	129	182497	182498	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.669259	3.847976	1.0821173	-	-	-	hypothetical protein	1.540553	3.353935	1.0946437	144	tRNA and rRNA cytosine-C5-methylases	J	RNA binding protein (fmu, PCNA P120 homolog), probable	 0.000000e+00	 0	1.656540e-02	 1.942495e-02	 1.475076e-01	 6.803203e-01	5.479120e-02		 0	 5	 TRUE	 TRUE	 42	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7461327	0.6224019	U	0.4686274	0.6162291
13773	129	182498	182499	1	 -16	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.540553	3.353935	1.0946437	144	tRNA and rRNA cytosine-C5-methylases	J	RNA binding protein (fmu, PCNA P120 homolog), probable	1.432058	2.898941	0.9247452	-	-	-	hypothetical protein	 0.000000e+00	 0	1.177120e-02	-1.723931e-03	-1.865737e-02	-6.484475e-02	6.506038e-01		 5	 0	 TRUE	 TRUE	 43	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5026348	0.4703906	U	0.4686274	0.6162291
13773	129	182499	182500	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.432058	2.898941	0.9247452	-	-	-	hypothetical protein	1.512351	3.304625	1.0925300	2078	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	6.447011e-03	-1.178640e-03	 1.544381e-02	-5.233451e-02	4.468353e-01		 0	14	FALSE	 TRUE	 42	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5061378	0.5044629	U	0.4686274	0.6162291
13773	129	182500	182501	1	 106	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.512351	3.304625	1.0925300	2078	Uncharacterized conserved protein	S	conserved hypothetical protein	1.533888	3.466014	1.1172152	-	-	-	hypothetical protein	 0.000000e+00	 0	4.638368e-04	 5.028723e-03	 8.738081e-02	 4.000485e-01	1.307626e-02		14	 0	 TRUE	 TRUE	 43	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6357198	0.6414085	U	0.4686274	0.6162291
13773	129	182501	182502	1	 139	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.533888	3.466014	1.1172152	-	-	-	hypothetical protein	1.641382	3.655480	1.0989031	-	-	-	hypothetical protein	 0.000000e+00	 0	1.155511e-02	 1.567317e-02	 2.783765e-01	 6.385901e-01	5.300950e-02		 0	 0	FALSE	 TRUE	 42	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7331597	0.6228520	U	0.4686274	0.6162291
13773	129	182502	182503	1	  65	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.641382	3.655480	1.0989031	-	-	-	hypothetical protein	1.495231	3.513274	1.1314811	1030	Membrane-bound serine protease (ClpP class)	O	conserved protein (nfeD homolog)	 0.000000e+00	 0	2.136035e-02	 8.328715e-03	 3.133346e-02	 4.389422e-01	1.995065e-01		 0	13	FALSE	 TRUE	 41	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6517905	0.5802713	U	0.4686274	0.6162291
13773	129	182503	182504	1	  -3	Same	-	-	21.836226	0	 31.632499	 31.63249937	1.495231	3.513274	1.1314811	1030	Membrane-bound serine protease (ClpP class)	O	conserved protein (nfeD homolog)	1.543997	3.438770	1.1166546	330	Membrane protease subunits, stomatin/prohibitin homologs	O	conserved protein (band 7 homolog)	 1.631922e-01	13	2.378192e-03	 4.059572e-03	 8.510082e-02	 3.454570e-01	6.259597e-02	O	13	20	FALSE	 TRUE	 40	 TRUE	2.3091900	1.9849804	0.5480306	2.3866357	0.7781369	1.1036584	0.6111945	0.6196253	Y	1.4497162	0.9293123
13773	129	182504	182505	1	 594	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.543997	3.438770	1.1166546	330	Membrane protease subunits, stomatin/prohibitin homologs	O	conserved protein (band 7 homolog)	1.368305	2.798821	0.9631346	-	-	-	hypothetical protein	 0.000000e+00	 0	3.086772e-02	-7.694288e-03	-7.347221e-02	-4.903261e-01	1.963870e+00		20	 0	FALSE	 TRUE	 39	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4064110	0.4085563	U	0.4686274	0.6162291
13773	129	182505	182506	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.368305	2.798821	0.9631346	-	-	-	hypothetical protein	1.637768	3.727488	1.1127721	1527	Archaeal/vacuolar-type H+-ATPase subunit C	C	H+-transporting ATP synthase subunit C (atpC)	 0.000000e+00	 0	7.261019e-02	-1.548547e-02	-8.964286e-02	-6.209415e-01	2.543327e+00		 0	 2	 TRUE	 TRUE	 40	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3924147	0.4031382	U	0.4686274	0.6162291
13773	129	182506	182507	1	   2	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.637768	3.727488	1.1127721	1527	Archaeal/vacuolar-type H+-ATPase subunit C	C	H+-transporting ATP synthase subunit C (atpC)	1.650310	3.966760	1.1578150	-	-	-	H+-transporting ATP synthase subunit C (atpC)	 0.000000e+00	 0	1.572990e-04	 3.707319e-02	 4.664794e-01	 8.580282e-01	1.908342e-04		 2	 0	 TRUE	 TRUE	 41	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7960501	0.6545960	U	0.4686274	0.6162291
13773	129	182507	182508	1	  15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.650310	3.966760	1.1578150	-	-	-	H+-transporting ATP synthase subunit C (atpC)	1.576964	3.268963	1.0634920	-	-	-	hypothetical protein	 0.000000e+00	 0	5.379636e-03	 2.497821e-02	 2.523499e-01	 7.656362e-01	1.272758e-02		 0	 0	FALSE	 TRUE	 40	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7721850	0.6416331	U	0.4686274	0.6162291
13773	129	182508	182509	1	 219	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.576964	3.268963	1.0634920	-	-	-	hypothetical protein	1.450868	3.187342	1.0537514	1394	Archaeal/vacuolar-type H+-ATPase subunit D	C	H+-transporting ATP synthase subunit D (atpD)	 0.000000e+00	 0	1.590013e-02	-6.588848e-05	-2.007518e-02	 7.555620e-02	5.304489e-01		 0	18	FALSE	 TRUE	 39	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178581	0.4873963	U	0.4686274	0.6162291
13773	129	182509	182510	1	  48	Divergent	-	+	 0.000000	0	  0.000000	 -0.89864515	1.450868	3.187342	1.0537514	1394	Archaeal/vacuolar-type H+-ATPase subunit D	C	H+-transporting ATP synthase subunit D (atpD)	1.499951	3.312732	1.1080027	1161	Predicted GTPases	R	GTP binding protein, conjectural	-1.549428e-02	18	2.409089e-03	-2.547879e-05	 2.642688e-02	 4.678972e-02	1.730254e-01		18	26	FALSE	 TRUE	 38	FALSE	0.4469764	0.2154835	0.5480306	0.4469764	0.7781393	0.5247282	0.5186622	0.5869263	U	0.4686274	0.5304396
13773	129	182510	182511	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.499951	3.312732	1.1080027	1161	Predicted GTPases	R	GTP binding protein, conjectural	1.491585	3.601643	1.1213096	-	-	-	hypothetical protein	 0.000000e+00	 0	6.998809e-05	 1.951628e-03	 4.167116e-02	 2.292696e-01	3.225333e-03		26	 0	 TRUE	 TRUE	 39	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5617339	0.6482245	U	0.4686274	0.6162291
13773	129	182511	182512	1	 102	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.491585	3.601643	1.1213096	-	-	-	hypothetical protein	1.419527	3.087241	1.0290229	-	-	-	hypothetical protein	 0.000000e+00	 0	5.192283e-03	-1.280739e-03	 4.239303e-03	-1.007817e-01	4.550812e-01		 0	 0	 TRUE	 TRUE	 40	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4909197	0.5028383	U	0.4686274	0.6162291
13773	129	182512	182513	1	 119	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.419527	3.087241	1.0290229	-	-	-	hypothetical protein	1.485878	3.193664	1.0945603	492	Thioredoxin reductase	O	hypothetical protein	 0.000000e+00	 0	4.402370e-03	-1.098877e-03	 8.330621e-03	-9.255458e-02	4.067366e-01		 0	 0	FALSE	 TRUE	 39	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4946359	0.5111403	U	0.4686274	0.6162291
13773	129	182513	182514	1	 -18	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.485878	3.193664	1.0945603	492	Thioredoxin reductase	O	hypothetical protein	1.493811	3.226773	1.0691591	1109	Phosphomannomutase	G	phosphomannomutase (pmm)	 0.000000e+00	 0	6.293533e-05	 1.462771e-03	 3.939013e-02	 1.921064e-01	2.412521e-03	0	 0	66	 TRUE	 TRUE	 40	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5469422	0.6495169	N	0.5492530	0.6245624
13773	129	182514	182515	1	 114	Divergent	-	+	 0.000000	0	  0.000000	 -1.06948049	1.493811	3.226773	1.0691591	1109	Phosphomannomutase	G	phosphomannomutase (pmm)	1.497458	3.330861	1.1050919	1415	Uncharacterized conserved protein	S	conserved hypothetical protein	 2.790876e-04	11	1.330369e-05	 1.953996e-03	 4.440395e-02	 2.273259e-01	7.215181e-04		66	11	FALSE	 TRUE	 39	FALSE	0.4469764	0.2084843	0.5480306	0.4469764	0.7764261	0.4463331	0.5606037	0.6523872	U	0.4686274	0.5282179
13773	129	182515	182516	1	   2	Convergent	+	-	 0.000000	0	  0.000000	 -0.97359713	1.497458	3.330861	1.1050919	1415	Uncharacterized conserved protein	S	conserved hypothetical protein	1.644183	3.489635	1.0417960	284	Orotidine-5'-phosphate decarboxylase	F	orotidine-5'-monophosphate decarboxylase (pyrF)	 9.712865e-02	11	2.152816e-02	 8.880942e-03	 2.135758e-01	 4.554046e-01	1.920363e-01		11	23	 TRUE	 TRUE	 40	FALSE	0.4469764	0.2120169	0.5480306	0.4469764	0.7764261	1.0036732	0.6583952	0.5824114	U	0.4686274	0.5293394
13773	129	182516	182517	1	  42	Divergent	-	+	 2.662588	0	  2.662588	 -2.16516801	1.644183	3.489635	1.0417960	284	Orotidine-5'-phosphate decarboxylase	F	orotidine-5'-monophosphate decarboxylase (pyrF)	1.513341	3.258647	1.0469394	540	Aspartate carbamoyltransferase, catalytic chain	F	aspartate carbamoyltransferase catalytic subunit (pyrB)	 5.494118e-02	23	1.711950e-02	 1.194308e-02	 7.573665e-02	 5.409266e-01	1.198021e-01	F	23	64	FALSE	 TRUE	 39	FALSE	2.9244472	0.1942280	0.5480306	2.9399224	0.7771174	0.8695312	0.6930913	0.6010459	Y	1.4497162	0.5543498
13773	129	182517	182518	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -4.10362902	1.513341	3.258647	1.0469394	540	Aspartate carbamoyltransferase, catalytic chain	F	aspartate carbamoyltransferase catalytic subunit (pyrB)	1.540778	3.284618	1.0893749	456	Acetyltransferases	R	N-acyltransferase	 3.779153e-03	22	7.527863e-04	 5.537309e-03	 9.602588e-02	 4.179887e-01	1.824469e-02		64	22	 TRUE	 TRUE	 40	 TRUE	0.4469764	0.1847245	0.5480306	0.4469764	0.7773546	0.5329002	0.6425199	0.6385209	U	0.4686274	0.5206679
13773	129	182518	182519	1	  44	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.540778	3.284618	1.0893749	456	Acetyltransferases	R	N-acyltransferase	1.437661	3.416257	1.1756233	2064	Flp pilus assembly protein TadC	NU	hypothetical protein	 0.000000e+00	 0	1.063328e-02	-1.227466e-03	-1.342540e-02	-2.918762e-02	5.749434e-01		22	 0	 TRUE	 TRUE	 41	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5124020	0.4806166	U	0.4686274	0.6162291
13773	129	182519	182520	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.437661	3.416257	1.1756233	2064	Flp pilus assembly protein TadC	NU	hypothetical protein	1.455918	3.138264	1.0758581	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	conserved protein (possible type II secretion, gsp)	 0.000000e+00	 0	3.333421e-04	-6.214394e-05	 1.958420e-02	-5.681440e-03	3.252722e-02		 0	 0	 TRUE	 TRUE	 42	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195653	0.6313366	U	0.4686274	0.6162291
13773	129	182520	182521	1	 187	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.455918	3.138264	1.0758581	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	conserved protein (possible type II secretion, gsp)	1.524230	3.523480	1.1428227	-	-	-	hypothetical protein	 0.000000e+00	 0	4.666486e-03	 3.296167e-04	 3.801236e-02	 8.972387e-02	2.526933e-01		 0	 0	 TRUE	 TRUE	 43	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178025	0.5615344	U	0.4686274	0.6162291
13773	129	182521	182522	1	  34	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.524230	3.523480	1.1428227	-	-	-	hypothetical protein	1.487196	3.289940	1.1119503	343	Queuine/archaeosine tRNA-ribosyltransferase	J	queuine tRNA-ribosyltransferase	 0.000000e+00	 0	1.371477e-03	 2.607831e-03	 4.101187e-02	 2.741015e-01	4.650759e-02		 0	18	 TRUE	 TRUE	 44	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5820979	0.6254296	U	0.4686274	0.6162291
13773	129	182522	182523	1	  61	Convergent	+	-	 2.662588	0	  2.662588	  2.52905643	1.487196	3.289940	1.1119503	343	Queuine/archaeosine tRNA-ribosyltransferase	J	queuine tRNA-ribosyltransferase	1.451376	3.120207	1.0852209	1938	Archaeal enzymes of ATP-grasp superfamily	R	conserved hypothetical protein	 3.939979e-02	 2	1.283124e-03	-6.122688e-07	 1.747514e-02	 4.060763e-02	1.099205e-01		18	 2	 TRUE	 TRUE	 45	FALSE	2.9244472	1.6915159	0.5480306	2.9399224	0.6838149	0.8036459	0.5182413	0.6030494	U	0.4686274	0.8449322
13773	129	182523	182524	1	  -3	Same	-	-	 2.662588	0	  2.662588	  2.52905643	1.451376	3.120207	1.0852209	1938	Archaeal enzymes of ATP-grasp superfamily	R	conserved hypothetical protein	1.498892	3.209235	1.0064163	1675	Transcription initiation factor IIE, alpha subunit	K	conserved hypothetical protein	 7.264158e-02	 2	2.257823e-03	-8.122765e-07	 2.645783e-02	 4.761902e-02	1.642022e-01		 2	 6	FALSE	 TRUE	 44	 TRUE	2.9244472	1.6915159	0.5480306	2.9399224	0.6838149	0.9255497	0.5187029	0.5889325	U	0.4686274	0.8449322
13773	129	182524	182525	1	  71	Same	-	-	 2.079442	0	  2.079442	  1.87710112	1.498892	3.209235	1.0064163	1675	Transcription initiation factor IIE, alpha subunit	K	conserved hypothetical protein	1.485916	3.294559	1.1002488	2262	GTPases	R	conserved protein (possible hflX)	 1.751301e-02	 6	1.683775e-04	 1.639844e-03	 3.720832e-02	 2.081412e-01	7.126832e-03		 6	16	FALSE	 TRUE	 43	 TRUE	2.9335626	1.6493044	0.5480306	2.9479804	0.7537284	0.6569779	0.5531281	0.6443475	U	0.4686274	0.8376004
13773	129	182525	182526	1	 -10	Same	-	-	 5.689684	0	  5.689684	  5.46932462	1.485916	3.294559	1.1002488	2262	GTPases	R	conserved protein (possible hflX)	1.560335	3.393884	1.0718031	1813	Predicted transcription factor, homolog of eukaryotic MBF1	K	conserved helix-turn-helix protein	 3.156801e-02	10	5.538119e-03	 3.761049e-03	 9.182596e-02	 3.243427e-01	1.323329e-01		16	10	FALSE	 TRUE	 42	 TRUE	2.7798012	1.7814095	0.5480306	2.8373132	0.7739415	0.7450579	0.6018359	0.5978214	U	0.4686274	0.8615068
13773	129	182526	182527	1	   9	Divergent	-	+	 0.000000	0	  0.000000	 -0.26296505	1.560335	3.393884	1.0718031	1813	Predicted transcription factor, homolog of eukaryotic MBF1	K	conserved helix-turn-helix protein	1.537354	3.247715	1.0802860	1370	Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit	O	conserved protein with predicted RNA binding PUA domain	 8.710900e-02	 3	5.281137e-04	 9.364786e-03	 1.188589e-01	 5.487496e-01	5.772734e-03	0	10	 3	FALSE	 TRUE	 41	FALSE	0.4469764	0.2618532	0.5480306	0.4469764	0.7136133	0.9694943	0.6984841	0.6458271	N	0.5492530	0.5538839
13773	129	182527	182528	1	 231	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.537354	3.247715	1.0802860	1370	Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit	O	conserved protein with predicted RNA binding PUA domain	1.440953	3.135697	1.0550906	1676	tRNA splicing endonuclease	J	hypothetical protein	 0.000000e+00	 0	9.293125e-03	-8.974024e-04	-8.243501e-03	-2.160431e-03	4.996092e-01	0	 3	 0	 TRUE	 TRUE	 42	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199370	0.4925758	N	0.5492530	0.6245624
13773	129	182528	182529	1	 209	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.440953	3.135697	1.0550906	1676	tRNA splicing endonuclease	J	hypothetical protein	1.515501	3.360396	1.0818766	1958	Small nuclear ribonucleoprotein (snRNP) homolog	K	small nuclear ribonucleoprotein homolog (Sm-like)	 0.000000e+00	 0	5.557444e-03	-6.692698e-04	 2.307281e-02	-1.830595e-03	3.592636e-01	0	 0	 7	FALSE	 TRUE	 41	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199618	0.5214465	N	0.5492530	0.6245624
13773	129	182529	182530	1	 218	Same	+	+	 0.000000	0	  0.000000	 -0.19540680	1.515501	3.360396	1.0818766	1958	Small nuclear ribonucleoprotein (snRNP) homolog	K	small nuclear ribonucleoprotein homolog (Sm-like)	1.552381	3.931696	1.2241389	2095	Multiple antibiotic transporter	U	conserved hypothetical protein	 2.005552e-02	 6	1.360107e-03	 6.474221e-03	 1.118984e-01	 4.471227e-01	2.355978e-02	0	 7	 6	 TRUE	 TRUE	 42	 TRUE	0.4469764	0.2725548	0.5480306	0.4469764	0.7537284	0.6803870	0.6544113	0.6360567	N	0.5492530	0.5572505
13773	129	182530	182531	1	  13	Same	+	+	 0.000000	0	  0.000000	 -0.19540680	1.552381	3.931696	1.2241389	2095	Multiple antibiotic transporter	U	conserved hypothetical protein	1.503811	3.366408	1.1282142	489	ATPases involved in chromosome partitioning	D	conserved protein (possible ATP binding)	 1.391474e-02	 6	2.359009e-03	 5.293667e-03	 6.371106e-02	 3.976342e-01	4.817739e-02	0	 6	 9	 TRUE	 TRUE	 43	 TRUE	0.4469764	0.2725548	0.5480306	0.4469764	0.7537284	0.6317129	0.6332952	0.6245582	N	0.5492530	0.5572505
13773	129	182531	182532	1	  -6	Convergent	+	-	 0.000000	0	  0.000000	 -0.13353139	1.503811	3.366408	1.1282142	489	ATPases involved in chromosome partitioning	D	conserved protein (possible ATP binding)	1.422680	3.096117	1.0720129	295	Cytidine deaminase	F	cytidine deaminase	 3.365329e-02	 9	6.582377e-03	-1.505107e-03	-1.744595e-03	-1.045977e-01	5.293316e-01	0	 9	32	 TRUE	 TRUE	 44	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.7702221	0.7635181	0.4897711	0.4876243	N	0.5492530	0.5604716
13773	129	182532	182533	1	  38	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.422680	3.096117	1.0720129	295	Cytidine deaminase	F	cytidine deaminase	1.531106	3.305982	1.0607563	-	-	-	hypothetical protein	 0.000000e+00	 0	1.175618e-02	-2.288808e-03	 8.018948e-03	-1.351748e-01	7.789451e-01		32	 0	FALSE	 TRUE	 43	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4807639	0.4575852	U	0.4686274	0.6162291
13773	129	182533	182534	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.531106	3.305982	1.0607563	-	-	-	hypothetical protein	1.550767	3.563190	1.1586727	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase	 0.000000e+00	 0	3.865655e-04	 7.921371e-03	 1.222984e-01	 5.101928e-01	3.492148e-03		 0	36	 TRUE	 TRUE	 44	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6774964	0.6477695	U	0.4686274	0.6162291
13773	129	182534	182535	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	 -7.02201546	1.550767	3.563190	1.1586727	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase	1.491213	3.161209	1.0556459	112	Glycine/serine hydroxymethyltransferase	E	serine hydroxymethyltransferase	 1.970137e-02	36	3.546621e-03	 3.957119e-03	 4.595413e-02	 3.336535e-01	8.775781e-02		36	68	 TRUE	 TRUE	 45	FALSE	0.4469764	0.1801076	0.5480306	0.4469764	0.7743490	0.6747016	0.6055310	0.6119106	U	0.4686274	0.5191996
13773	129	182535	182536	1	  31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.491213	3.161209	1.0556459	112	Glycine/serine hydroxymethyltransferase	E	serine hydroxymethyltransferase	1.480207	3.215264	1.0717304	315	Molybdenum cofactor biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaC)	 0.000000e+00	 0	1.211305e-04	 1.147409e-03	 3.223519e-02	 1.640750e-01	6.743397e-03	0	68	 0	FALSE	 TRUE	 44	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5360872	0.6447284	N	0.5492530	0.6245624
13773	129	182536	182537	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.480207	3.215264	1.0717304	315	Molybdenum cofactor biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaC)	1.585448	3.414269	0.9758900	-	-	-	hypothetical protein	 0.000000e+00	 0	1.107550e-02	 3.862726e-03	 1.094300e-01	 3.065168e-01	2.220485e-01		 0	 0	FALSE	 TRUE	 43	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5943777	0.5735582	U	0.4686274	0.6162291
13773	129	182537	182538	1	  30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.585448	3.414269	0.9758900	-	-	-	hypothetical protein	1.477482	3.238811	1.1013507	1304	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases	C	conserved protein (possible oxidoreductase)	 0.000000e+00	 0	1.165662e-02	 3.497345e-03	 1.772141e-02	 2.865964e-01	2.450364e-01		 0	32	FALSE	 TRUE	 42	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5874146	0.5644275	U	0.4686274	0.6162291
13773	129	182538	182539	1	   0	Same	-	-	 0.000000	0	  0.000000	 -1.48359756	1.477482	3.238811	1.1013507	1304	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases	C	conserved protein (possible oxidoreductase)	1.587510	3.318279	1.0406920	90	Ribosomal protein L2	J	ribosomal protein L2	 6.836120e-02	17	1.210628e-02	 3.551159e-03	 1.075823e-01	 2.889607e-01	2.519223e-01	0	32	17	FALSE	 TRUE	 41	 TRUE	0.4469764	0.2022731	0.5480306	0.4469764	0.7782882	0.9080867	0.5890110	0.5619549	N	0.5492530	0.5350582
13773	129	182539	182540	1	 131	Divergent	-	+	 0.000000	0	  0.000000	 -0.90561490	1.587510	3.318279	1.0406920	90	Ribosomal protein L2	J	ribosomal protein L2	1.583317	3.336390	1.0640766	1383	Ribosomal protein S17E	J	ribosomal protein S17	 2.403925e-01	10	1.758774e-05	 1.795712e-02	 2.278427e-01	 7.055564e-01	7.126832e-05	J	17	10	FALSE	 TRUE	 40	FALSE	0.4469764	0.2140058	0.5480306	0.4469764	0.7739415	1.1774989	0.7554227	0.6552829	Y	1.4497162	0.6342789
13773	129	182540	182541	1	   3	Same	+	+	 0.000000	0	  0.000000	 -0.72495596	1.583317	3.336390	1.0640766	1383	Ribosomal protein S17E	J	ribosomal protein S17	1.435934	3.103154	1.0567906	1047	FKBP-type peptidyl-prolyl cis-trans isomerases 2	O	FKBP-type peptidyl-prolyl cis-trans isomerases	 2.081423e-01	10	2.172168e-02	-2.039419e-03	-4.669814e-02	-4.361621e-02	7.884568e-01	0	10	10	 TRUE	 TRUE	 41	 TRUE	0.4469764	0.2231634	0.5480306	0.4469764	0.7739415	1.1467808	0.5080803	0.4570748	N	0.5492530	0.5416732
13773	129	182541	182542	1	  36	Same	+	+	 2.833213	0	  2.833213	  2.48134488	1.435934	3.103154	1.0567906	1047	FKBP-type peptidyl-prolyl cis-trans isomerases 2	O	FKBP-type peptidyl-prolyl cis-trans isomerases	1.453995	3.165476	1.0281217	638	20S proteasome, alpha and beta subunits	O	proteasome beta subunit	 1.313252e-01	 8	3.262058e-04	-4.022592e-05	 1.967765e-02	-6.248053e-03	2.955338e-02	O	10	 8	 TRUE	 TRUE	 42	 TRUE	2.9141387	1.6886759	0.5480306	2.9300754	0.7652913	1.0689402	0.5194678	0.6332836	Y	1.4497162	0.8931801
13773	129	182542	182543	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.453995	3.165476	1.0281217	638	20S proteasome, alpha and beta subunits	O	proteasome beta subunit	1.534006	3.756878	1.1244229	-	-	-	hypothetical protein	 0.000000e+00	 0	6.401818e-03	 2.149677e-04	 4.056606e-02	 8.315423e-02	3.304264e-01		 8	 0	 TRUE	 TRUE	 43	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176981	0.5311515	U	0.4686274	0.6162291
13773	129	182543	182544	1	  40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.534006	3.756878	1.1244229	-	-	-	hypothetical protein	1.499482	3.647066	1.1301344	-	-	-	hypothetical protein	 0.000000e+00	 0	1.191935e-03	 3.972802e-03	 5.572946e-02	 3.507403e-01	3.593396e-02		 0	 0	FALSE	 TRUE	 42	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6128399	0.6295510	U	0.4686274	0.6162291
13773	129	182544	182545	1	 150	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.499482	3.647066	1.1301344	-	-	-	hypothetical protein	1.509771	2.970430	0.9679292	1051	ADP-ribose pyrophosphatase	F	mutT/nudix family protein	 0.000000e+00	 0	1.058597e-04	 2.807336e-03	 5.634367e-02	 2.844678e-01	3.402032e-03		 0	 1	FALSE	 TRUE	 41	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5861947	0.6479144	U	0.4686274	0.6162291
13773	129	182545	182546	1	 -14	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.509771	2.970430	0.9679292	1051	ADP-ribose pyrophosphatase	F	mutT/nudix family protein	1.565516	3.273674	1.0636836	-	-	-	hypothetical protein	 0.000000e+00	 0	3.107506e-03	 6.662249e-03	 1.230546e-01	 4.474532e-01	5.336348e-02		 1	 0	FALSE	 TRUE	 40	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6547409	0.6227021	U	0.4686274	0.6162291
13773	129	182546	182547	1	 135	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.565516	3.273674	1.0636836	-	-	-	hypothetical protein	1.465128	3.124450	1.0733994	148	Enolase	G	enolase	 0.000000e+00	 0	1.007778e-02	 1.567449e-03	 6.469158e-03	 1.767867e-01	3.269066e-01		 0	72	 TRUE	 TRUE	 41	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5409111	0.5320384	U	0.4686274	0.6162291
13773	129	182547	182548	1	  31	Same	+	+	 0.000000	0	  0.000000	 -0.24929257	1.465128	3.124450	1.0733994	148	Enolase	G	enolase	1.446528	3.075336	1.0341624	2005	N-terminal domain of molybdenum-binding protein	R	molybdenum-pterin-binding protein, conjectural	 1.134242e-03	 3	3.459264e-04	-6.681062e-05	 1.953755e-02	 1.076093e-02	3.035029e-02		72	 3	 TRUE	 TRUE	 42	 TRUE	0.4469764	0.2655387	0.5480306	0.4469764	0.7136133	0.4743646	0.5188347	0.6329638	U	0.4686274	0.5462885
13773	129	182548	182549	1	 -15	Convergent	+	-	 0.000000	0	  0.000000	 -0.24929257	1.446528	3.075336	1.0341624	2005	N-terminal domain of molybdenum-binding protein	R	molybdenum-pterin-binding protein, conjectural	1.453060	3.282593	1.0830607	2896	Molybdenum cofactor biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)	 1.979252e-02	 3	4.266377e-05	-8.110820e-06	 2.058983e-02	 5.603104e-03	4.561173e-03		 3	46	 TRUE	 TRUE	 43	FALSE	0.4469764	0.2655387	0.5480306	0.4469764	0.7136133	0.6769674	0.5194054	0.6466721	U	0.4686274	0.5462885
13773	129	182549	182550	1	 417	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.453060	3.282593	1.0830607	2896	Molybdenum cofactor biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)	1.539114	3.490453	1.1355176	515	Serine/threonine protein kinase	RTKL	serine/threonine protein kinase, putative	 1.328577e-02	 1	7.405284e-03	 1.462666e-04	 4.198244e-02	 8.217886e-02	3.519412e-01		46	 1	FALSE	 TRUE	 42	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.6266456	0.5177197	0.5245375	U	0.4686274	0.6162291
13773	129	182550	182551	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.539114	3.490453	1.1355176	515	Serine/threonine protein kinase	RTKL	serine/threonine protein kinase, putative	1.405822	3.066275	1.0521206	1716	FOG: FHA domain	T	conserved protein with Forkhead-associated (FHA) domain	 0.000000e+00	 0	1.776688e-02	-3.997559e-03	-4.027065e-02	-2.503462e-01	1.128193e+00		 1	 0	 TRUE	 TRUE	 43	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4519979	0.4315963	U	0.4686274	0.6162291
13773	129	182551	182552	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405822	3.066275	1.0521206	1716	FOG: FHA domain	T	conserved protein with Forkhead-associated (FHA) domain	1.449734	3.148717	1.0133307	52	Ribosomal protein S2	J	ribosomal protein S2	 0.000000e+00	 0	1.928317e-03	 7.557962e-05	 1.635451e-02	-2.871937e-02	1.886879e-01	0	 0	24	 TRUE	 TRUE	 44	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5124682	0.5831776	N	0.5492530	0.6245624
13773	129	182552	182553	1	   0	Same	+	+	11.478023	0	 19.747230	 19.09335264	1.449734	3.148717	1.0133307	52	Ribosomal protein S2	J	ribosomal protein S2	1.473521	3.146803	1.0158347	1355	Predicted dioxygenase	R	conserved hypothetical protein	 1.080117e-01	14	5.657866e-04	-3.669888e-05	 2.154505e-02	 2.447390e-02	4.817739e-02		24	14	 TRUE	 TRUE	 45	 TRUE	2.6221289	1.9090096	0.5480306	2.6004115	0.7782928	1.0391005	0.5173998	0.6245582	U	0.4686274	0.8818418
13773	129	182553	182554	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.99153234	1.473521	3.146803	1.0158347	1355	Predicted dioxygenase	R	conserved hypothetical protein	1.478206	3.359414	1.1499565	469	Pyruvate kinase	G	pyruvate kinase	 2.250070e-04	14	2.195637e-05	 5.933237e-04	 2.825738e-02	 1.057457e-01	2.565660e-03		14	46	 TRUE	 TRUE	 46	FALSE	0.4469764	0.2110144	0.5480306	0.4469764	0.7782928	0.4447162	0.5193883	0.6491703	U	0.4686274	0.5290211
13773	129	182554	182555	1	  70	Same	-	-	 0.000000	0	  0.000000	 -1.22906110	1.478206	3.359414	1.1499565	469	Pyruvate kinase	G	pyruvate kinase	1.459370	3.097435	1.0818092	1782	Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH d	R	mRNA 3'-end processing factor, conjectural	 4.129487e-04	17	3.548021e-04	 2.139007e-04	 2.157447e-02	 6.096563e-02	3.170203e-02		46	17	FALSE	 TRUE	 45	 TRUE	0.4469764	0.2054034	0.5480306	0.4469764	0.7782882	0.4535485	0.5184704	0.6317872	U	0.4686274	0.5272395
13773	129	182555	182556	1	  43	Divergent	-	+	 0.000000	0	  0.000000	 -1.59857000	1.459370	3.097435	1.0818092	1782	Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH d	R	mRNA 3'-end processing factor, conjectural	1.427379	2.958822	1.0306013	215	Cysteinyl-tRNA synthetase	J	cysteinyl-tRNA synthetase	 1.026729e-02	17	1.023456e-03	-1.915691e-04	 1.980068e-02	-2.529142e-02	1.019290e-01		17	67	FALSE	 TRUE	 44	FALSE	0.4469764	0.2006892	0.5480306	0.4469764	0.7782882	0.6013653	0.5137307	0.6058668	U	0.4686274	0.5257421
13773	129	182556	182557	1	 -15	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.427379	2.958822	1.0306013	215	Cysteinyl-tRNA synthetase	J	cysteinyl-tRNA synthetase	1.534494	3.377874	1.1157814	-	-	-	paREP1	 0.000000e+00	 0	1.147379e-02	-1.995616e-03	 1.347746e-02	-1.015014e-01	7.088012e-01		67	 0	 TRUE	 TRUE	 45	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4905758	0.4637726	U	0.4686274	0.6162291
13773	129	182557	182558	1	 101	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.534494	3.377874	1.1157814	-	-	-	paREP1	1.493703	3.239560	1.0849401	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	1.663927e-03	 3.516062e-03	 4.885707e-02	 3.210650e-01	5.515108e-02		 0	 0	FALSE	 TRUE	 44	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6000118	0.6221915	U	0.4686274	0.6162291
13773	129	182558	182559	1	  38	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.493703	3.239560	1.0849401	-	-	-	P. aerophilum family 1964 protein	1.486127	3.329788	1.1688817	-	-	-	hypothetical protein	 0.000000e+00	 0	5.740027e-05	 1.469612e-03	 3.643847e-02	 1.925682e-01	1.913643e-03		 0	 0	FALSE	 TRUE	 43	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5470988	0.6504429	U	0.4686274	0.6162291
13773	129	182559	182560	1	  47	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.486127	3.329788	1.1688817	-	-	-	hypothetical protein	1.441863	3.256038	1.1299402	-	-	-	hypothetical protein	 0.000000e+00	 0	1.959297e-03	-3.310110e-04	 1.403424e-02	 2.563304e-03	1.692157e-01		 0	 0	FALSE	 TRUE	 42	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197693	0.5878822	U	0.4686274	0.6162291
13773	129	182560	182561	1	  42	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.441863	3.256038	1.1299402	-	-	-	hypothetical protein	1.391891	3.129297	1.1043846	-	-	-	hypothetical protein	 0.000000e+00	 0	2.497164e-03	 5.670409e-04	 3.612801e-02	-2.973244e-03	2.404988e-01		 0	 0	 TRUE	 TRUE	 43	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198601	0.5658265	U	0.4686274	0.6162291
13773	129	182561	182562	1	  60	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.391891	3.129297	1.1043846	-	-	-	hypothetical protein	1.510709	3.415478	1.0846840	2078	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.411768e-02	-3.529412e-03	-2.058505e-02	-2.742817e-01	1.103870e+00		 0	 0	 TRUE	 TRUE	 44	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4464598	0.4325133	U	0.4686274	0.6162291
13773	129	182562	182563	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.510709	3.415478	1.0846840	2078	Uncharacterized conserved protein	S	conserved hypothetical protein	1.503360	3.364273	1.0714091	5373	Predicted membrane protein	S	hypothetical protein	 0.000000e+00	 0	5.400358e-05	 3.082532e-03	 5.470273e-02	 2.981890e-01	1.592641e-03		 0	 0	 TRUE	 TRUE	 45	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5913657	0.6508783	U	0.4686274	0.6162291
13773	129	182563	182564	1	 -19	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.503360	3.364273	1.0714091	5373	Predicted membrane protein	S	hypothetical protein	1.426583	3.117886	0.9977260	1437	Adenylate cyclase, class 2 (thermophilic)	F	adenylate cyclase	 0.000000e+00	 0	5.894842e-03	-1.289329e-03	 3.673888e-04	-8.161813e-02	4.644480e-01		 0	 8	 TRUE	 TRUE	 46	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4973948	0.5005273	U	0.4686274	0.6162291
13773	129	182564	182565	1	   8	Same	+	+	 0.000000	0	  0.000000	 -0.64121939	1.426583	3.117886	0.9977260	1437	Adenylate cyclase, class 2 (thermophilic)	F	adenylate cyclase	1.363420	3.000304	1.0377123	1793	ATP-dependent DNA ligase	L	DNA ligase	 1.009977e-01	 8	3.989529e-03	 2.182628e-03	 6.434827e-02	 1.093397e-01	3.027955e-01	0	 8	23	 TRUE	 TRUE	 47	 TRUE	0.4469764	0.2277940	0.5480306	0.4469764	0.7652913	1.0184367	0.5198242	0.5404711	N	0.5492530	0.5431375
13773	129	182565	182566	1	 -12	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.363420	3.000304	1.0377123	1793	ATP-dependent DNA ligase	L	DNA ligase	1.353158	2.858480	1.0113100	-	-	-	hypothetical protein	 0.000000e+00	 0	1.053108e-04	 8.642026e-03	 1.266354e-01	 5.364143e-01	3.053347e-03		23	 0	 TRUE	 TRUE	 48	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6900526	0.6486369	U	0.4686274	0.6162291
13773	129	182566	182567	1	  41	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.353158	2.858480	1.0113100	-	-	-	hypothetical protein	1.481347	3.252315	1.1060134	524	Sugar kinases, ribokinase family	G	sugar kinase, possible phosphofructokinase	 0.000000e+00	 0	1.643252e-02	-2.942565e-03	-3.589558e-02	-2.860098e-01	1.291877e+00		 0	48	FALSE	 TRUE	 47	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4436539	0.4242983	U	0.4686274	0.6162291
13773	129	182567	182568	1	  20	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.481347	3.252315	1.1060134	524	Sugar kinases, ribokinase family	G	sugar kinase, possible phosphofructokinase	1.279916	2.668448	0.9278247	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	4.057463e-02	-5.136482e-03	 3.307466e-02	-3.650882e-01	1.814117e+00		48	 0	 TRUE	 TRUE	 48	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4247594	0.4105806	U	0.4686274	0.6162291
13773	129	182568	182569	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.279916	2.668448	0.9278247	-	-	-	conserved hypothetical protein	1.506127	3.432370	1.1171862	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar-phosphate nucleotidyl transferase	 0.000000e+00	 0	5.117175e-02	-9.385734e-03	-1.560676e-01	-5.252799e-01	2.285828e+00		 0	 0	 TRUE	 TRUE	 49	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4012022	0.4051863	U	0.4686274	0.6162291
13773	129	182569	182570	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.506127	3.432370	1.1171862	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar-phosphate nucleotidyl transferase	1.433042	3.179839	1.0745698	-	-	-	hypothetical protein	 0.000000e+00	 0	5.341497e-03	-1.004431e-03	 2.240736e-03	-4.069362e-02	3.797889e-01		 0	 0	 TRUE	 TRUE	 50	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5089582	0.5171998	U	0.4686274	0.6162291
13773	129	182570	182571	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.433042	3.179839	1.0745698	-	-	-	hypothetical protein	1.394041	2.996007	1.0562057	-	-	-	hypothetical protein	 0.000000e+00	 0	1.521079e-03	 1.052462e-03	 4.054125e-02	 3.509464e-02	1.531974e-01		 0	 0	 TRUE	 TRUE	 51	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175935	0.5924418	U	0.4686274	0.6162291
13773	129	182571	182572	1	 -31	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.394041	2.996007	1.0562057	-	-	-	hypothetical protein	1.574368	3.557632	1.1554942	1585	Membrane protein implicated in regulation of membrane protease activity	OU	conserved hypothetical protein	 0.000000e+00	 0	3.251784e-02	-7.052861e-03	-3.167474e-02	-3.799532e-01	1.640680e+00		 0	 0	 TRUE	 TRUE	 52	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4228929	0.4136182	U	0.4686274	0.6162291
13773	129	182572	182573	1	  27	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.574368	3.557632	1.1554942	1585	Membrane protein implicated in regulation of membrane protease activity	OU	conserved hypothetical protein	1.422092	3.092617	1.0807382	1341	Predicted GTPase or GTP-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	2.318784e-02	-3.603226e-03	-5.761670e-02	-1.656046e-01	1.035615e+00		 0	 0	FALSE	 TRUE	 51	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4735558	0.4363716	U	0.4686274	0.6162291
13773	129	182573	182574	1	 464	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.422092	3.092617	1.0807382	1341	Predicted GTPase or GTP-binding protein	R	conserved hypothetical protein	1.496691	3.264346	1.0897555	-	-	-	paREP1	 0.000000e+00	 0	5.564931e-03	-1.327252e-03	 8.249717e-03	-9.817653e-02	4.707455e-01		 0	 0	 TRUE	 TRUE	 52	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4921679	0.4989495	U	0.4686274	0.6162291
13773	129	182574	182575	1	 153	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.496691	3.264346	1.0897555	-	-	-	paREP1	1.539562	3.271036	1.1252582	-	-	-	paREP2a	 0.000000e+00	 0	1.837956e-03	 3.993899e-03	 8.196638e-02	 3.430621e-01	5.195461e-02		 0	 0	 TRUE	 TRUE	 53	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6101043	0.6232413	U	0.4686274	0.6162291
13773	129	182575	182576	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.539562	3.271036	1.1252582	-	-	-	paREP2a	1.520816	3.409530	1.1258872	-	-	-	paREP2a	 0.000000e+00	 0	3.514403e-04	 6.120955e-03	 8.480304e-02	 4.466898e-01	6.743397e-03		 0	 0	 TRUE	 TRUE	 54	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6540822	0.6447284	U	0.4686274	0.6162291
13773	129	182576	182577	1	 589	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.520816	3.409530	1.1258872	-	-	-	paREP2a	1.447233	3.132004	1.1125610	-	-	-	paREP2b	 0.000000e+00	 0	5.414354e-03	-2.887725e-04	 5.166042e-03	 3.569659e-02	3.269066e-01		 0	 0	 TRUE	 TRUE	 55	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176804	0.5320384	U	0.4686274	0.6162291
13773	129	182577	182578	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.447233	3.132004	1.1125610	-	-	-	paREP2b	1.315118	3.082837	1.0683350	-	-	-	paREP2b	 0.000000e+00	 0	1.745438e-02	 5.668520e-04	 7.448220e-02	-5.156175e-02	9.306400e-01		 0	 0	 TRUE	 TRUE	 56	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5063500	0.4448241	U	0.4686274	0.6162291
13773	129	182578	182579	1	 281	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.315118	3.082837	1.0683350	-	-	-	paREP2b	1.520230	3.007831	0.9799636	-	-	-	hypothetical protein	 0.000000e+00	 0	4.207099e-02	-9.380805e-03	-1.240723e-01	-5.650889e-01	2.341863e+00		 0	 0	 TRUE	 TRUE	 57	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3972970	0.4046271	U	0.4686274	0.6162291
13773	129	182579	182580	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.520230	3.007831	0.9799636	-	-	-	hypothetical protein	1.514707	3.339650	1.1079437	1145	Ferredoxin	C	hypothetical protein	 0.000000e+00	 0	3.050757e-05	 4.358386e-03	 6.984352e-02	 3.687647e-01	8.958605e-04		 0	 0	FALSE	 TRUE	 56	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6195476	0.6519767	U	0.4686274	0.6162291
13773	129	182580	182581	1	  13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.514707	3.339650	1.1079437	1145	Ferredoxin	C	hypothetical protein	1.376923	2.959327	1.0256184	727	Predicted Fe-S-cluster oxidoreductase	R	conserved hypothetical protein	 0.000000e+00	 0	1.898455e-02	-4.715022e-03	-3.048807e-02	-3.628535e-01	1.451812e+00		 0	 0	FALSE	 TRUE	 55	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4253771	0.4183522	U	0.4686274	0.6162291
13773	129	182581	182582	1	 391	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.376923	2.959327	1.0256184	727	Predicted Fe-S-cluster oxidoreductase	R	conserved hypothetical protein	1.530738	3.089687	1.0322092	2163	Ribosomal protein L14E/L6E/L27E	J	ribosomal protein L14	 0.000000e+00	 0	2.365912e-02	-5.908840e-03	-4.644602e-02	-4.178456e-01	1.676260e+00		 0	 6	FALSE	 TRUE	 54	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4156704	0.4127699	U	0.4686274	0.6162291
13773	129	182582	182583	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.39438724	1.530738	3.089687	1.0322092	2163	Ribosomal protein L14E/L6E/L27E	J	ribosomal protein L14	1.553793	3.395572	1.0946606	130	Pseudouridine synthase	J	tRNA pseudouridine synthase B	 5.817335e-03	 6	5.315223e-04	 8.124896e-03	 1.263770e-01	 5.157618e-01	5.428172e-03	J	 6	36	 TRUE	 TRUE	 55	 TRUE	0.4469764	0.2425956	0.5480306	0.4469764	0.7537284	0.5520185	0.6807626	0.6460943	Y	1.4497162	0.6426867
13773	129	182583	182584	1	  73	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.553793	3.395572	1.0946606	130	Pseudouridine synthase	J	tRNA pseudouridine synthase B	1.656478	3.372302	1.1238781	1888	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	1.054428e-02	 2.100065e-02	 3.464661e-01	 7.089549e-01	3.308323e-02		36	 0	 TRUE	 TRUE	 56	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7567634	0.6310514	U	0.4686274	0.6162291
13773	129	182584	182585	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.656478	3.372302	1.1238781	1888	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.410424	3.472098	1.1644774	1814	Uncharacterized membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	6.054233e-02	-8.402017e-03	-1.800501e-01	-2.914992e-01	1.559144e+00		 0	 0	 TRUE	 TRUE	 57	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4425799	0.4154925	U	0.4686274	0.6162291
13773	129	182585	182586	1	  21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.410424	3.472098	1.1644774	1814	Uncharacterized membrane protein	S	conserved hypothetical protein	1.507787	3.218375	1.0704351	-	-	-	hypothetical protein	 0.000000e+00	 0	9.479384e-03	-2.310362e-03	-2.461786e-03	-1.727049e-01	7.507564e-01		 0	 0	 TRUE	 TRUE	 58	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4722396	0.4596276	U	0.4686274	0.6162291
13773	129	182586	182587	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.507787	3.218375	1.0704351	-	-	-	hypothetical protein	1.386871	3.012888	1.0581280	673	Predicted dehydrogenases and related proteins	R	conserved NAD/P oxidoreductase	 0.000000e+00	 0	1.462047e-02	-3.638603e-03	-1.931011e-02	-2.959438e-01	1.184305e+00		 0	19	 TRUE	 TRUE	 59	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4416760	0.4290592	U	0.4686274	0.6162291
13773	129	182587	182588	1	  60	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.386871	3.012888	1.0581280	673	Predicted dehydrogenases and related proteins	R	conserved NAD/P oxidoreductase	1.409456	3.117503	1.0507727	-	-	-	hypothetical protein	 0.000000e+00	 0	5.100510e-04	 2.705847e-03	 4.626948e-02	 1.684100e-01	4.683919e-02		19	 0	 TRUE	 TRUE	 60	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5381862	0.6252488	U	0.4686274	0.6162291
13773	129	182588	182589	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.409456	3.117503	1.0507727	-	-	-	hypothetical protein	1.465711	3.583837	1.1803597	1266	Predicted metal-dependent membrane protease	R	conserved hypothetical protein	 0.000000e+00	 0	3.164689e-03	-6.004734e-04	 9.771131e-03	-7.134371e-02	2.935760e-01		 0	 1	 TRUE	 TRUE	 61	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5011836	0.5445363	U	0.4686274	0.6162291
13773	129	182589	182590	1	  29	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.465711	3.583837	1.1803597	1266	Predicted metal-dependent membrane protease	R	conserved hypothetical protein	1.452901	3.035021	1.0316017	-	-	-	hypothetical protein	 0.000000e+00	 0	1.640975e-04	 2.159730e-05	 2.047535e-02	 2.597465e-02	1.221339e-02		 1	 0	FALSE	 TRUE	 60	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173871	0.6419378	U	0.4686274	0.6162291
13773	129	182590	182591	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.452901	3.035021	1.0316017	-	-	-	hypothetical protein	1.425474	3.133749	1.0918115	1058	Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA	R	competence damage protein, conjectural	 0.000000e+00	 0	7.522447e-04	-3.909473e-05	 2.198080e-02	-1.926012e-02	7.976398e-02		 0	13	 TRUE	 TRUE	 61	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5156999	0.6145887	U	0.4686274	0.6162291
13773	129	182591	182592	1	  11	Same	-	-	 0.000000	0	  0.000000	 -0.38282396	1.425474	3.133749	1.0918115	1058	Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA	R	competence damage protein, conjectural	1.470485	3.684082	1.2323363	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	 3.459085e-02	 8	2.026005e-03	-4.948518e-04	 1.417146e-02	-4.596748e-02	1.954142e-01		13	 8	FALSE	 TRUE	 60	 TRUE	0.4469764	0.2444483	0.5480306	0.4469764	0.7652913	0.7675504	0.5076707	0.5811598	U	0.4686274	0.5396202
13773	129	182592	182593	1	  41	Divergent	-	+	 0.000000	0	  0.000000	 -0.43209501	1.470485	3.684082	1.2323363	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	1.446824	3.145806	1.0665260	1225	Peroxiredoxin	O	antioxidant protein, putative	 1.896643e-02	 8	5.598349e-04	-8.722161e-05	 1.884516e-02	 1.454934e-02	4.919340e-02		 8	18	FALSE	 TRUE	 59	FALSE	0.4469764	0.2392413	0.5480306	0.4469764	0.7652913	0.6713241	0.5181939	0.6240491	U	0.4686274	0.5379716
13773	129	182593	182594	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.446824	3.145806	1.0665260	1225	Peroxiredoxin	O	antioxidant protein, putative	1.488847	3.313913	1.1255926	-	-	-	hypothetical protein	 0.000000e+00	 0	1.765856e-03	-1.711029e-04	 2.224648e-02	 2.300259e-02	1.454869e-01		18	 0	 TRUE	 TRUE	 60	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174613	0.5941308	U	0.4686274	0.6162291
13773	129	182594	182595	1	 -31	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.488847	3.313913	1.1255926	-	-	-	hypothetical protein	1.408977	3.268247	1.1057475	2044	Predicted peroxiredoxins	R	conserved hypothetical protein	 0.000000e+00	 0	6.379114e-03	-1.588623e-03	 3.169488e-03	-1.403491e-01	5.737801e-01		 0	 2	 TRUE	 TRUE	 61	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4795323	0.4809145	U	0.4686274	0.6162291
13773	129	182595	182596	1	  52	Same	-	-	 0.000000	0	  0.000000	 -0.13150953	1.408977	3.268247	1.1057475	2044	Predicted peroxiredoxins	R	conserved hypothetical protein	1.451336	3.243689	1.1011245	177	Predicted EndoIII-related endonuclease	L	DNA-(apurinic or apyrimidinic site) lyase (endonuclease III, PaNth)	 6.687249e-03	 2	1.794260e-03	 2.415338e-06	 1.619714e-02	-3.049990e-02	1.743046e-01		 2	58	FALSE	 TRUE	 60	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.5679838	0.5118739	0.5863631	U	0.4686274	0.5537552
13773	129	182596	182597	1	  46	Divergent	-	+	 0.000000	0	  0.000000	 -0.07232066	1.451336	3.243689	1.1011245	177	Predicted EndoIII-related endonuclease	L	DNA-(apurinic or apyrimidinic site) lyase (endonuclease III, PaNth)	1.360445	2.857612	1.0272008	-	-	-	conserved hypothetical protein	 3.317640e-03	 1	8.261101e-03	 5.178962e-06	 4.180367e-02	-6.802709e-02	6.642938e-01		58	 1	FALSE	 TRUE	 59	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.5238969	0.5015123	0.4695664	U	0.4686274	0.5573725
13773	129	182597	182598	1	  45	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.360445	2.857612	1.0272008	-	-	-	conserved hypothetical protein	1.437552	3.195152	1.0902979	-	-	-	hypothetical protein	 0.000000e+00	 0	5.945421e-03	 1.258804e-03	 1.493704e-02	 2.986555e-02	4.613151e-01		 1	 0	 TRUE	 TRUE	 60	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173858	0.5017230	U	0.4686274	0.6162291
13773	129	182598	182599	1	 374	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.437552	3.195152	1.0902979	-	-	-	hypothetical protein	1.455734	3.115681	1.0798994	2317	Zn-dependent carboxypeptidase	E	thermostable carboxypeptidase	 0.000000e+00	 0	3.305775e-04	-6.008103e-05	 1.959656e-02	-5.661414e-03	3.170203e-02		 0	17	 TRUE	 TRUE	 61	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195879	0.6317872	U	0.4686274	0.6162291
13773	129	182599	182600	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.455734	3.115681	1.0798994	2317	Zn-dependent carboxypeptidase	E	thermostable carboxypeptidase	1.469651	3.264140	1.1324701	-	-	-	hypothetical protein	 0.000000e+00	 0	1.936848e-04	 7.925391e-05	 2.246304e-02	 3.679919e-02	1.762801e-02		17	 0	 TRUE	 TRUE	 62	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178299	0.6389823	U	0.4686274	0.6162291
13773	129	182600	182601	1	  41	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.469651	3.264140	1.1324701	-	-	-	hypothetical protein	1.290259	2.920433	1.0092300	1019	Predicted nucleotidyltransferase	R	conserved protein (possible cytidylyltransferase)	 0.000000e+00	 0	3.218129e-02	-2.941957e-03	 5.142884e-02	-2.594550e-01	1.519156e+00		 0	 8	FALSE	 TRUE	 61	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4506836	0.4165262	U	0.4686274	0.6162291
13773	129	182601	182602	1	 -29	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.290259	2.920433	1.0092300	1019	Predicted nucleotidyltransferase	R	conserved protein (possible cytidylyltransferase)	1.427958	3.110262	1.0780717	4882	Predicted aminopeptidase, Iap family	R	conserved hypothetical protein	 1.557260e-03	 1	1.896106e-02	 3.776072e-03	 3.473306e-04	 1.345322e-01	6.781263e-01		 8	 1	 TRUE	 TRUE	 62	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4867810	0.5263238	0.4669420	U	0.4686274	0.6162291
13773	129	182602	182603	1	  17	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.427958	3.110262	1.0780717	4882	Predicted aminopeptidase, Iap family	R	conserved hypothetical protein	1.395690	3.176819	1.0359613	-	-	-	hypothetical protein	 0.000000e+00	 0	1.041274e-03	 1.305373e-03	 4.248555e-02	 6.453258e-02	1.038986e-01		 1	 0	FALSE	 TRUE	 61	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183075	0.6047112	U	0.4686274	0.6162291
13773	129	182603	182604	1	 120	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.395690	3.176819	1.0359613	-	-	-	hypothetical protein	1.367194	3.001789	1.0632445	1254	Acylphosphatases	C	conserved hypothetical protein	 0.000000e+00	 0	8.120184e-04	 4.690162e-03	 8.570051e-02	 3.155714e-01	4.885355e-02		 0	 0	FALSE	 TRUE	 60	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5982030	0.6242586	U	0.4686274	0.6162291
13773	129	182604	182605	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.367194	3.001789	1.0632445	1254	Acylphosphatases	C	conserved hypothetical protein	1.499050	3.257809	1.1115424	123	Deacetylases, including yeast histone deacetylase and acetoin utilization protein	BQ	hypothetical protein	 0.000000e+00	 0	1.738609e-02	-4.012693e-03	-3.841593e-02	-3.423059e-01	1.402307e+00		 0	 0	 TRUE	 TRUE	 61	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4290352	0.4195990	U	0.4686274	0.6162291
13773	129	182605	182606	1	 105	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.499050	3.257809	1.1115424	123	Deacetylases, including yeast histone deacetylase and acetoin utilization protein	BQ	hypothetical protein	1.512006	3.262629	1.0978213	77	Prephenate dehydratase	E	chorismate mutase/prephenate dehydratase (P-protein)	 0.000000e+00	 0	1.678447e-04	 2.888628e-03	 5.807448e-02	 2.884600e-01	5.541848e-03		 0	46	FALSE	 TRUE	 60	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5881499	0.6460120	U	0.4686274	0.6162291
13773	129	182606	182607	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	 -0.53138184	1.512006	3.262629	1.0978213	77	Prephenate dehydratase	E	chorismate mutase/prephenate dehydratase (P-protein)	1.400468	3.126320	1.1163000	1204	Superfamily II helicase	R	ATP-dependent, DNA binding helicase	 2.115434e-03	11	1.244068e-02	-3.086708e-03	-1.809697e-02	-2.394262e-01	9.831872e-01		46	11	 TRUE	 TRUE	 61	FALSE	0.4469764	0.2336233	0.5480306	0.4469764	0.7764261	0.4978055	0.4539367	0.4410068	U	0.4686274	0.5361920
13773	129	182607	182608	1	  34	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.400468	3.126320	1.1163000	1204	Superfamily II helicase	R	ATP-dependent, DNA binding helicase	1.669197	3.827928	1.1692134	-	-	-	hypothetical protein	 0.000000e+00	 0	7.221541e-02	-1.109170e-02	 4.935327e-03	-3.948937e-01	1.864074e+00		11	 0	FALSE	 TRUE	 60	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4203740	0.4101240	U	0.4686274	0.6162291
13773	129	182608	182609	1	 483	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.669197	3.827928	1.1692134	-	-	-	hypothetical protein	1.317147	2.896654	1.0176715	1241	Predicted ATPase involved in replication control, Cdc46/Mcm family	L	DNA replication licensing factor (mcm)	 0.000000e+00	 0	1.239392e-01	-2.923931e-02	-3.958404e-01	-8.568172e-01	3.429461e+00		 0	10	FALSE	 TRUE	 59	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3803337	0.3996808	U	0.4686274	0.6162291
13773	129	182609	182610	1	  56	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.317147	2.896654	1.0176715	1241	Predicted ATPase involved in replication control, Cdc46/Mcm family	L	DNA replication licensing factor (mcm)	1.432233	3.080251	0.9973433	-	-	-	paREP8	 0.000000e+00	 0	1.324483e-02	 2.572114e-03	 5.976864e-03	 7.827029e-02	6.655454e-01		10	 0	 TRUE	 TRUE	 60	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178028	0.4693615	U	0.4686274	0.6162291
13773	129	182610	182611	1	 399	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.432233	3.080251	0.9973433	-	-	-	paREP8	1.614890	3.544759	1.0553635	-	-	-	hypothetical protein	 0.000000e+00	 0	3.336351e-02	-3.132558e-03	 5.106307e-02	-7.707227e-02	9.514857e-01		 0	 0	 TRUE	 TRUE	 61	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4990412	0.4425379	U	0.4686274	0.6162291
13773	129	182611	182612	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.614890	3.544759	1.0553635	-	-	-	hypothetical protein	1.450176	3.186206	1.0696120	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	2.713065e-02	-1.989351e-04	-4.946892e-02	 7.639022e-02	6.444282e-01		 0	 4	 TRUE	 TRUE	 62	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178388	0.4709442	U	0.4686274	0.6162291
13773	129	182612	182613	1	 -21	Same	+	+	 2.813411	0	  2.813411	  2.75278609	1.450176	3.186206	1.0696120	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.405885	3.088764	1.0044692	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 6.136219e-02	 3	1.961704e-03	 5.537170e-05	 2.664059e-02	-3.027902e-02	1.920363e-01		 4	 3	 TRUE	 TRUE	 63	 TRUE	2.9158527	1.7134129	0.5480306	2.9317243	0.7136133	0.8901821	0.5119398	0.5824114	U	0.4686274	0.8486894
13773	129	182613	182614	1	  40	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405885	3.088764	1.0044692	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.413613	2.805570	0.9759612	-	-	-	paREP7	 0.000000e+00	 0	5.972353e-05	 1.719277e-03	 3.920539e-02	 9.678474e-02	6.008332e-03		 3	 0	 TRUE	 TRUE	 64	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181938	0.6454790	U	0.4686274	0.6162291
13773	129	182614	182615	1	 244	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.413613	2.805570	0.9759612	-	-	-	paREP7	1.466235	3.526198	1.0785862	-	-	-	hypothetical protein	 0.000000e+00	 0	2.769037e-03	-5.607222e-04	 1.111630e-02	-6.325800e-02	2.550134e-01		 0	 0	 TRUE	 TRUE	 65	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5030259	0.5607931	U	0.4686274	0.6162291
13773	129	182615	182616	1	  86	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.466235	3.526198	1.0785862	-	-	-	hypothetical protein	1.401141	3.326478	1.1905569	-	-	-	hypothetical protein	 0.000000e+00	 0	4.237151e-03	-7.458264e-04	 1.787068e-02	-9.382681e-02	4.067366e-01		 0	 0	FALSE	 TRUE	 64	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4942204	0.5111403	U	0.4686274	0.6162291
13773	129	182616	182617	1	 103	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.401141	3.326478	1.1905569	-	-	-	hypothetical protein	1.736141	4.077092	1.0654721	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.122247e-01	-1.430902e-02	 5.292676e-02	-4.000150e-01	1.929605e+00		 0	 0	 TRUE	 TRUE	 65	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4193145	0.4092599	U	0.4686274	0.6162291
13773	129	182617	182618	1	 696	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.736141	4.077092	1.0654721	-	-	-	conserved within P. aerophilum	1.432814	3.490229	1.1112725	4346	Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase	O	hypothetical protein	 0.000000e+00	 0	9.200709e-02	-5.290252e-03	-2.461479e-01	-7.608571e-02	1.121681e+00		 0	 0	 TRUE	 TRUE	 66	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4992186	0.4317105	U	0.4686274	0.6162291
13773	129	182618	182619	1	  16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.432814	3.490229	1.1112725	4346	Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase	O	hypothetical protein	1.390180	3.166037	1.0456348	-	-	-	hypothetical protein	 0.000000e+00	 0	1.817693e-03	 1.137261e-03	 4.267397e-02	 3.884595e-02	1.794690e-01		 0	 0	 TRUE	 TRUE	 67	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180728	0.5852468	U	0.4686274	0.6162291
13773	129	182619	182620	1	 -25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.390180	3.166037	1.0456348	-	-	-	hypothetical protein	1.497664	3.478799	1.0788891	-	-	-	hypothetical protein	 0.000000e+00	 0	1.155280e-02	-2.832383e-03	-1.645792e-02	-2.465372e-01	9.862334e-01		 0	 0	 TRUE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4528104	0.4407019	U	0.4686274	0.6162291
13773	129	182620	182621	1	  83	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.497664	3.478799	1.0788891	-	-	-	hypothetical protein	1.475008	3.347439	1.1696371	-	-	-	hypothetical protein	 0.000000e+00	 0	5.132900e-04	 1.092683e-03	 2.949278e-02	 1.555487e-01	3.088746e-02		 0	 0	 TRUE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5326737	0.6324772	U	0.4686274	0.6162291
13773	129	182621	182622	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.475008	3.347439	1.1696371	-	-	-	hypothetical protein	1.465331	3.277503	1.0865923	-	-	-	P. aerophilum family 1964 protein part 1, authentic frameshift	 0.000000e+00	 0	9.363579e-05	 3.291540e-04	 2.366343e-02	 7.085838e-02	8.481519e-03		 0	 0	 TRUE	 TRUE	 70	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180623	0.6437931	U	0.4686274	0.6162291
13773	129	182622	182623	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.465331	3.277503	1.0865923	-	-	-	P. aerophilum family 1964 protein part 1, authentic frameshift	1.609334	3.442157	1.0704173	-	-	-	P. aerophilum family 1964 protein part 2, authentic frameshift	 0.000000e+00	 0	2.073672e-02	 2.201440e-03	 1.093330e-01	 1.977843e-01	4.335965e-01		 0	 0	 TRUE	 TRUE	 71	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5494867	0.5065808	U	0.4686274	0.6162291
13773	129	182623	182624	1	 -28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.609334	3.442157	1.0704173	-	-	-	P. aerophilum family 1964 protein part 2, authentic frameshift	1.366715	3.056843	1.0457874	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	histidinol-phosphate aminotransferase (hisC)	 0.000000e+00	 0	5.886388e-02	-1.337411e-02	-1.807758e-01	-6.062225e-01	2.463189e+00		 0	41	 TRUE	 TRUE	 72	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3933493	0.4037247	U	0.4686274	0.6162291
13773	129	182624	182625	1	  14	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.366715	3.056843	1.0457874	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	histidinol-phosphate aminotransferase (hisC)	1.349076	2.887138	0.9626965	-	-	-	paREP15, putative coiled-coil protein	 0.000000e+00	 0	3.111460e-04	 8.664014e-03	 1.304163e-01	 5.382201e-01	9.350875e-03		41	 0	FALSE	 TRUE	 71	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6908093	0.6432396	U	0.4686274	0.6162291
13773	129	182625	182626	1	  31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.349076	2.887138	0.9626965	-	-	-	paREP15, putative coiled-coil protein	1.386220	2.979124	1.0475468	1243	Histone acetyltransferase	KB	conserved hypothetical protein	 0.000000e+00	 0	1.379745e-03	 6.668256e-03	 8.290554e-02	 4.215557e-01	6.031303e-02		 0	11	FALSE	 TRUE	 70	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6447252	0.6204913	U	0.4686274	0.6162291
13773	129	182626	182627	1	 147	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.386220	2.979124	1.0475468	1243	Histone acetyltransferase	KB	conserved hypothetical protein	1.437285	3.065015	1.0790153	-	-	-	hypothetical protein	 0.000000e+00	 0	2.607541e-03	 9.194683e-04	 2.120744e-02	 2.270868e-02	2.457968e-01		11	 0	FALSE	 TRUE	 69	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174969	0.5639198	U	0.4686274	0.6162291
13773	129	182627	182628	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.437285	3.065015	1.0790153	-	-	-	hypothetical protein	1.528117	3.354155	1.1179660	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	8.250507e-03	-1.082443e-03	 2.252501e-02	-2.815099e-02	5.028693e-01		 0	 1	 TRUE	 TRUE	 70	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5127328	0.4922710	U	0.4686274	0.6162291
13773	129	182628	182629	1	 -12	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.528117	3.354155	1.1179660	-	-	-	conserved hypothetical protein	1.585681	3.723899	1.1653564	-	-	-	hypothetical protein	 0.000000e+00	 0	3.313572e-03	 1.030309e-02	 1.720507e-01	 5.589251e-01	2.929010e-02		 1	 0	 TRUE	 TRUE	 71	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7027872	0.6334684	U	0.4686274	0.6162291
13773	129	182629	182630	1	 -21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.585681	3.723899	1.1653564	-	-	-	hypothetical protein	1.458876	3.133471	1.0541428	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	 0.000000e+00	 0	1.607946e-02	 1.004856e-03	-1.316648e-02	 1.389273e-01	4.519802e-01		 0	 0	 TRUE	 TRUE	 72	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5269771	0.5034307	U	0.4686274	0.6162291
13773	129	182630	182631	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.458876	3.133471	1.0541428	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	1.557299	3.405976	1.0778474	-	-	-	hypothetical protein	 0.000000e+00	 0	9.687242e-03	 7.924843e-04	 5.834513e-02	 1.272228e-01	3.620289e-01		 0	 0	 TRUE	 TRUE	 73	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5235175	0.5204865	U	0.4686274	0.6162291
13773	129	182631	182632	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.557299	3.405976	1.0778474	-	-	-	hypothetical protein	1.491024	3.438312	1.1452904	-	-	-	hypothetical protein	 0.000000e+00	 0	4.392412e-03	 4.197225e-03	 4.531780e-02	 3.427947e-01	1.029115e-01		 0	 0	FALSE	 TRUE	 72	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6098326	0.6052131	U	0.4686274	0.6162291
13773	129	182632	182633	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.491024	3.438312	1.1452904	-	-	-	hypothetical protein	1.506545	3.433118	1.1483105	-	-	-	hypothetical protein	 0.000000e+00	 0	2.408961e-04	 2.185757e-03	 5.003009e-02	 2.440699e-01	9.954005e-03		 0	 0	FALSE	 TRUE	 71	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5674389	0.6428219	U	0.4686274	0.6162291
13773	129	182633	182634	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.506545	3.433118	1.1483105	-	-	-	hypothetical protein	1.513387	3.615644	1.1669097	-	-	-	hypothetical protein	 0.000000e+00	 0	4.680888e-05	 3.419099e-03	 6.275012e-02	 3.187167e-01	1.357043e-03		 0	 0	FALSE	 TRUE	 70	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5989764	0.6512883	U	0.4686274	0.6162291
13773	129	182634	182635	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.513387	3.615644	1.1669097	-	-	-	hypothetical protein	1.486326	3.294613	1.1368289	-	-	-	hypothetical protein	 0.000000e+00	 0	7.323021e-04	 2.165621e-03	 3.939776e-02	 2.439615e-01	2.722627e-02		 0	 0	FALSE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5672352	0.6344003	U	0.4686274	0.6162291
13773	129	182635	182636	1	 109	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.486326	3.294613	1.1368289	-	-	-	hypothetical protein	1.453178	3.209656	1.0907752	719	ABC-type transport system involved in Fe-S cluster assembly, permease component	O	conserved hypothetical protein	 0.000000e+00	 0	1.098772e-03	 6.235783e-05	 1.837592e-02	 4.879230e-02	9.096960e-02		 0	 4	FALSE	 TRUE	 68	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187680	0.6104368	U	0.4686274	0.6162291
13773	129	182636	182637	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.24987868	1.453178	3.209656	1.0907752	719	ABC-type transport system involved in Fe-S cluster assembly, permease component	O	conserved hypothetical protein	1.365079	2.973028	1.0308492	1571	Predicted DNA-binding protein containing a Zn-ribbon domain	R	conserved hypothetical protein	 6.304986e-02	 4	7.761460e-03	-1.540774e-04	 3.784773e-02	-8.111160e-02	6.592991e-01		 4	 9	 TRUE	 TRUE	 69	FALSE	0.4469764	0.2646721	0.5480306	0.4469764	0.7323301	0.8982713	0.4976757	0.4697032	U	0.4686274	0.5460148
13773	129	182637	182638	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.27068181	1.365079	2.973028	1.0308492	1571	Predicted DNA-binding protein containing a Zn-ribbon domain	R	conserved hypothetical protein	1.425728	3.134281	1.0920087	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	conserved hypothetical protein	 6.304986e-02	 4	3.678275e-03	 2.215276e-03	 2.939246e-02	 1.152638e-01	2.804202e-01		 9	 4	FALSE	 TRUE	 68	 TRUE	0.4469764	0.2582304	0.5480306	0.4469764	0.7323301	0.8982713	0.5211902	0.5510159	U	0.4686274	0.5439795
13773	129	182638	182639	1	 315	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.425728	3.134281	1.0920087	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	conserved hypothetical protein	1.357147	3.327950	1.0897331	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	4.703279e-03	 2.418844e-03	 6.990328e-02	 1.222611e-01	3.269066e-01		 4	 0	FALSE	 TRUE	 67	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5224983	0.5320384	U	0.4686274	0.6162291
13773	129	182639	182640	1	 268	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.357147	3.327950	1.0897331	-	-	-	conserved hypothetical protein	1.464238	3.241085	1.0725587	-	-	-	hypothetical protein	 0.000000e+00	 0	1.146849e-02	-1.210614e-03	-1.555471e-02	-1.573546e-01	9.041777e-01		 0	 0	FALSE	 TRUE	 66	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4751134	0.4460064	U	0.4686274	0.6162291
13773	129	182640	182641	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.464238	3.241085	1.0725587	-	-	-	hypothetical protein	1.461349	3.153058	1.0630435	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-oxoacid ferredoxin oxidoreductase beta subunit	 0.000000e+00	 0	8.349897e-06	 1.278836e-04	 2.206562e-02	 4.077137e-02	4.953443e-04		 0	 0	 TRUE	 TRUE	 67	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182668	0.6533218	U	0.4686274	0.6162291
13773	129	182641	182642	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.461349	3.153058	1.0630435	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-oxoacid ferredoxin oxidoreductase beta subunit	1.435906	3.088495	1.0889707	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-oxoacid ferredoxin oxidoreductase alpha subunit	 0.000000e+00	 0	6.473150e-04	-1.541807e-04	 1.929233e-02	-1.026617e-02	5.993666e-02	C	 0	 0	FALSE	 TRUE	 66	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185396	0.6206752	Y	1.4497162	0.7118045
13773	129	182642	182643	1	 114	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.435906	3.088495	1.0889707	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-oxoacid ferredoxin oxidoreductase alpha subunit	1.562464	3.520473	1.0390130	-	-	-	hypothetical protein	 0.000000e+00	 0	1.601700e-02	-1.720133e-03	 3.134600e-02	-4.213666e-02	7.023546e-01		 0	 0	FALSE	 TRUE	 65	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5084870	0.4645365	U	0.4686274	0.6162291
13773	129	182643	182644	1	 -12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.562464	3.520473	1.0390130	-	-	-	hypothetical protein	1.459442	3.702968	1.1911268	2095	Multiple antibiotic transporter	U	conserved hypothetical protein part 2, authentic frameshift	 0.000000e+00	 0	1.061355e-02	 8.940692e-04	 2.628400e-05	 1.396529e-01	3.675914e-01		 0	 0	FALSE	 TRUE	 64	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5273697	0.5196393	U	0.4686274	0.6162291
13773	129	182644	182645	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.459442	3.702968	1.1911268	2095	Multiple antibiotic transporter	U	conserved hypothetical protein part 2, authentic frameshift	1.608405	3.878638	1.1177668	2095	Multiple antibiotic transporter	U	conserved hypothetical protein part 1, authentic frameshift	 0.000000e+00	 0	2.218994e-02	 1.263869e-03	 9.795687e-02	 1.567338e-01	4.931208e-01	U	 0	 0	FALSE	 TRUE	 63	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5329434	0.4934901	Y	1.4497162	0.7118045
13773	129	182645	182646	1	 235	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.608405	3.878638	1.1177668	2095	Multiple antibiotic transporter	U	conserved hypothetical protein part 1, authentic frameshift	1.339448	2.794488	1.0130874	1980	Archaeal fructose 1,6-bisphosphatase	G	conserved hypothetical protein	 0.000000e+00	 0	7.233788e-02	-1.757670e-02	-2.155561e-01	-7.350273e-01	2.942160e+00	0	 0	13	FALSE	 TRUE	 62	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3853423	0.4011162	N	0.5492530	0.6245624
13773	129	182646	182647	1	   7	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.339448	2.794488	1.0130874	1980	Archaeal fructose 1,6-bisphosphatase	G	conserved hypothetical protein	1.506580	3.217210	1.0081269	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	conserved hypothetical protein	 0.000000e+00	 0	2.793309e-02	-6.177924e-03	-7.558603e-02	-4.569089e-01	1.910463e+00		13	 0	FALSE	 TRUE	 61	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4110840	0.4096714	U	0.4686274	0.6162291
13773	129	182647	182648	1	  66	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.506580	3.217210	1.0081269	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	conserved hypothetical protein	1.416679	3.087727	1.0477793	505	Carbamoylphosphate synthase small subunit	EF	carbamoyl-phosphate synthase small subunit	 0.000000e+00	 0	8.082281e-03	-1.915783e-03	-6.336311e-03	-1.356448e-01	6.321653e-01		 0	62	 TRUE	 TRUE	 62	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4805186	0.4727649	U	0.4686274	0.6162291
13773	129	182648	182649	1	 -10	Same	+	+	67.140257	0	171.302008	169.13232703	1.416679	3.087727	1.0477793	505	Carbamoylphosphate synthase small subunit	EF	carbamoyl-phosphate synthase small subunit	1.375613	2.993771	1.0833492	458	Carbamoylphosphate synthase large subunit (split gene in MJ)	EF	carbamoyl-phosphate synthase large subunit	 2.613429e-01	54	1.686368e-03	 2.630629e-03	 6.301869e-02	 1.548596e-01	1.419954e-01		62	54	 TRUE	 TRUE	 63	 TRUE	2.0240781	2.0809063	0.5480306	2.0271885	0.7712119	1.1980473	0.5321358	0.5953411	U	0.4686274	0.9091377
13773	129	182649	182650	1	  -6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.375613	2.993771	1.0833492	458	Carbamoylphosphate synthase large subunit (split gene in MJ)	EF	carbamoyl-phosphate synthase large subunit	1.386683	3.038612	1.0565477	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	 0.000000e+00	 0	1.225476e-04	 4.903660e-03	 7.412313e-02	 3.332118e-01	8.340750e-03		54	 0	 TRUE	 TRUE	 64	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6052650	0.6438916	U	0.4686274	0.6162291
13773	129	182650	182651	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.386683	3.038612	1.0565477	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	1.468860	3.304613	1.1208190	309	Hydrogenase maturation factor	O	hydrogenase expression/formation protein HypE	 0.000000e+00	 0	6.752968e-03	-1.130278e-03	-2.336776e-03	-1.371326e-01	6.248642e-01		 0	18	 TRUE	 TRUE	 65	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4801497	0.4739005	U	0.4686274	0.6162291
13773	129	182651	182652	1	  27	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.468860	3.304613	1.1208190	309	Hydrogenase maturation factor	O	hydrogenase expression/formation protein HypE	1.390032	3.050840	1.0617509	1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR	KE	aminotransferase, conjectural	 0.000000e+00	 0	6.213868e-03	-1.071792e-03	 1.699294e-02	-1.294374e-01	5.784402e-01		18	 0	FALSE	 TRUE	 64	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4817403	0.4799478	U	0.4686274	0.6162291
13773	129	182652	182653	1	  14	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.390032	3.050840	1.0617509	1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR	KE	aminotransferase, conjectural	1.514504	3.254372	1.0717942	1628	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.549345e-02	-3.872596e-03	-2.398849e-02	-2.967401e-01	1.194349e+00		 0	 2	 TRUE	 TRUE	 65	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4411298	0.4283385	U	0.4686274	0.6162291
13773	129	182653	182654	1	  -6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.514504	3.254372	1.0717942	1628	Uncharacterized conserved protein	S	conserved hypothetical protein	1.366875	2.909193	1.0267602	687	Spermidine/putrescine-binding periplasmic protein	E	putrescine/spermidine binding protein, conjectural	 1.430590e-02	 2	2.179448e-02	-5.334061e-03	-3.360423e-02	-4.039465e-01	1.624989e+00		 2	30	 TRUE	 TRUE	 66	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.6337586	0.4188892	0.4139867	U	0.4686274	0.6162291
13773	129	182654	182655	1	 173	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.366875	2.909193	1.0267602	687	Spermidine/putrescine-binding periplasmic protein	E	putrescine/spermidine binding protein, conjectural	1.466248	3.059054	1.0496699	-	-	-	paREP2b	 0.000000e+00	 0	9.875050e-03	-1.255540e-03	-1.152246e-02	-1.583176e-01	8.396916e-01		30	 0	 TRUE	 TRUE	 67	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4745968	0.4516044	U	0.4686274	0.6162291
13773	129	182655	182656	1	   3	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.466248	3.059054	1.0496699	-	-	-	paREP2b	1.644157	3.489375	1.1271705	-	-	-	paREP2a	 0.000000e+00	 0	3.165170e-02	 2.863574e-03	 1.480225e-01	 2.143404e-01	4.856047e-01		 0	 0	FALSE	 TRUE	 66	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5550161	0.4950121	U	0.4686274	0.6162291
13773	129	182656	182657	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.644157	3.489375	1.1271705	-	-	-	paREP2a	1.454602	3.067897	1.0447487	118	Glutamine amidotransferase	E	amidotransferase (hisH)	 0.000000e+00	 0	3.593134e-02	 6.185602e-04	-6.636728e-02	 1.174955e-01	6.419662e-01		 0	52	 TRUE	 TRUE	 67	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5216828	0.4710831	U	0.4686274	0.6162291
13773	129	182657	182658	1	 -20	Convergent	+	-	 6.112575	0	  9.082990	  8.86124587	1.454602	3.067897	1.0447487	118	Glutamine amidotransferase	E	amidotransferase (hisH)	1.296632	2.881735	0.9748761	139	Phosphoribosyl-AMP cyclohydrolase	E	phosphoribosyl-AMP cyclohydrolase	 4.085506e-02	 8	2.495434e-02	-4.966095e-04	 7.572838e-02	-1.204111e-01	1.161035e+00	E	52	 8	 TRUE	 TRUE	 68	FALSE	2.7711050	1.8252021	0.5480306	2.7823725	0.7652913	0.8065087	0.4851003	0.4302352	Y	1.4497162	0.9101386
13773	129	182658	182659	1	 101	Divergent	-	+	 0.000000	0	  0.000000	 -0.01801851	1.296632	2.881735	0.9748761	139	Phosphoribosyl-AMP cyclohydrolase	E	phosphoribosyl-AMP cyclohydrolase	1.420531	3.108098	1.0825802	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	histidinol-phosphate aminotransferase (hisC)	 1.780802e-03	 8	1.535084e-02	 4.776226e-03	 1.817812e-02	 2.036042e-01	5.428172e-01	E	 8	14	FALSE	 TRUE	 67	FALSE	0.4469764	0.3087842	0.5480306	0.4469764	0.7652913	0.4905695	0.5507909	0.4845925	Y	1.4497162	0.6618114
13773	129	182659	182660	1	  42	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.420531	3.108098	1.0825802	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	histidinol-phosphate aminotransferase (hisC)	1.466604	3.447424	1.1544730	-	-	-	paREP1, degenerate	 0.000000e+00	 0	2.122722e-03	-4.694415e-04	 1.341763e-02	-5.044914e-02	2.022583e-01		14	 0	 TRUE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5067014	0.5792906	U	0.4686274	0.6162291
13773	129	182660	182661	1	 359	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.466604	3.447424	1.1544730	-	-	-	paREP1, degenerate	1.390198	3.180899	1.1232359	40	ATP phosphoribosyltransferase	E	ATP phosphoribosyltransferase (hisG)	 0.000000e+00	 0	5.837921e-03	-9.308400e-04	 1.877660e-02	-1.178955e-01	5.416870e-01		 0	21	 TRUE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4856918	0.4848191	U	0.4686274	0.6162291
13773	129	182661	182662	1	 503	Same	+	+	 0.000000	0	  0.000000	 -5.24074230	1.390198	3.180899	1.1232359	40	ATP phosphoribosyltransferase	E	ATP phosphoribosyltransferase (hisG)	1.387480	2.980088	1.0448866	125	Thymidylate kinase	F	thymidylate kinase (tmk)	 2.897276e-03	21	7.387617e-06	 3.911197e-03	 6.733206e-02	 2.619046e-01	5.300950e-04	0	21	60	 TRUE	 TRUE	 70	 TRUE	0.4469764	0.1824277	0.5480306	0.4469764	0.7775415	0.5125675	0.5749072	0.6531640	N	0.5492530	0.5287628
13773	129	182662	182663	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.387480	2.980088	1.0448866	125	Thymidylate kinase	F	thymidylate kinase (tmk)	1.420478	3.229922	1.0867249	-	-	-	hypothetical protein	 0.000000e+00	 0	1.088876e-03	 1.975895e-03	 3.589386e-02	 1.124744e-01	9.518385e-02		60	 0	 TRUE	 TRUE	 71	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5201912	0.6086719	U	0.4686274	0.6162291
13773	129	182663	182664	1	  47	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.420478	3.229922	1.0867249	-	-	-	hypothetical protein	1.447961	3.442078	1.1399522	1266	Predicted metal-dependent membrane protease	R	conserved hypothetical protein	 0.000000e+00	 0	7.553258e-04	 1.061017e-04	 1.958104e-02	-1.335839e-02	7.675834e-02		 0	 0	FALSE	 TRUE	 70	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173066	0.6159494	U	0.4686274	0.6162291
13773	129	182664	182665	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.447961	3.442078	1.1399522	1266	Predicted metal-dependent membrane protease	R	conserved hypothetical protein	1.663790	3.501288	1.0719524	1611	Predicted Rossmann fold nucleotide-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	4.658244e-02	-7.289534e-04	 1.267489e-01	 5.863380e-02	7.762381e-01		 0	 3	 TRUE	 TRUE	 71	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186320	0.4577766	U	0.4686274	0.6162291
13773	129	182665	182666	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.31372225	1.663790	3.501288	1.0719524	1611	Predicted Rossmann fold nucleotide-binding protein	R	conserved hypothetical protein	1.386358	3.029650	1.0020071	521	Molybdopterin biosynthesis enzymes	H	molybdenum cofactor biosynthesis protein (moaB)	 3.253907e-02	 3	7.696879e-02	-1.381325e-02	-2.445940e-01	-5.059880e-01	2.189401e+00		 3	34	FALSE	 TRUE	 70	 TRUE	0.4469764	0.2527773	0.5480306	0.4469764	0.7136133	0.7528976	0.4050609	0.4058902	U	0.4686274	0.5422555
13773	129	182666	182667	1	  17	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.386358	3.029650	1.0020071	521	Molybdopterin biosynthesis enzymes	H	molybdenum cofactor biosynthesis protein (moaB)	1.494421	3.339597	1.0525629	3255	Putative sterol carrier protein	I	conserved hypothetical protein	 0.000000e+00	 0	1.167753e-02	-2.798304e-03	-1.802019e-02	-2.511413e-01	1.009231e+00	0	34	 0	FALSE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4518346	0.4388235	N	0.5492530	0.6245624
13773	129	182667	182668	1	  31	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.494421	3.339597	1.0525629	3255	Putative sterol carrier protein	I	conserved hypothetical protein	1.431435	3.023164	1.0401514	4996	Predicted phosphatase	R	conserved hypothetical protein	 0.000000e+00	 0	3.967138e-03	-8.587249e-04	 7.007110e-03	-4.598868e-02	3.207923e-01		 0	 3	FALSE	 TRUE	 68	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5075334	0.5347337	U	0.4686274	0.6162291
13773	129	182668	182669	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	 -0.13150953	1.431435	3.023164	1.0401514	4996	Predicted phosphatase	R	conserved hypothetical protein	1.376480	3.024022	1.0766245	15	Adenylosuccinate lyase	F	adenylosuccinate lyase (purB)	 1.178361e-03	 3	3.020112e-03	 1.495074e-03	 5.145865e-02	 6.061459e-02	2.691563e-01		 3	57	 TRUE	 TRUE	 69	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7136133	0.4775709	0.5185170	0.5538632	U	0.4686274	0.5537552
13773	129	182669	182670	1	   6	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.376480	3.024022	1.0766245	15	Adenylosuccinate lyase	F	adenylosuccinate lyase (purB)	1.493159	3.251390	1.0517638	-	-	-	paREP1	 3.554731e-03	 1	1.361393e-02	-3.128796e-03	-2.566683e-02	-2.827102e-01	1.156079e+00		57	 1	FALSE	 TRUE	 68	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.5281729	0.4447161	0.4303479	U	0.4686274	0.5573725
13773	129	182670	182671	1	  21	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.493159	3.251390	1.0517638	-	-	-	paREP1	1.404958	3.043681	1.0660468	104	Adenylosuccinate synthase	F	adenylosuccinate synthetase (purA)	 3.317640e-03	 1	7.779405e-03	-1.939400e-03	-8.924127e-04	-1.666725e-01	6.756007e-01		 1	58	FALSE	 TRUE	 67	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.5238969	0.4728998	0.4673400	U	0.4686274	0.5573725
13773	129	182671	182672	1	 331	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.404958	3.043681	1.0660468	104	Adenylosuccinate synthase	F	adenylosuccinate synthetase (purA)	1.390835	3.141533	1.0753401	2886	Uncharacterized small protein	S	hypothetical protein	 0.000000e+00	 0	1.994503e-04	 2.812020e-03	 5.745389e-02	 1.809108e-01	1.783239e-02		58	 0	FALSE	 TRUE	 66	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5423788	0.6388731	U	0.4686274	0.6162291
13773	129	182672	182673	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.390835	3.141533	1.0753401	2886	Uncharacterized small protein	S	hypothetical protein	1.567405	3.727032	1.1397007	-	-	-	hypothetical protein	 0.000000e+00	 0	3.117687e-02	-7.025433e-03	-3.654009e-02	-3.965534e-01	1.676260e+00		 0	 0	 TRUE	 TRUE	 67	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4199509	0.4127699	U	0.4686274	0.6162291
13773	129	182673	182674	1	  83	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.567405	3.727032	1.1397007	-	-	-	hypothetical protein	1.560821	3.559673	1.1465521	-	-	-	hypothetical protein	 0.000000e+00	 0	4.334797e-05	 1.269493e-02	 1.654011e-01	 6.229806e-01	2.597465e-04		 0	 0	 TRUE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7276519	0.6541658	U	0.4686274	0.6162291
13773	129	182674	182675	1	  75	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.560821	3.559673	1.1465521	-	-	-	hypothetical protein	1.422157	3.082070	1.0080655	-	-	-	paREP1	 0.000000e+00	 0	1.922765e-02	-3.199221e-03	-4.490716e-02	-1.576938e-01	9.665168e-01		 0	 1	 TRUE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4749845	0.4418015	U	0.4686274	0.6162291
13773	129	182675	182676	1	 256	Same	+	+	 0.000000	0	  0.000000	 -0.07232066	1.422157	3.082070	1.0080655	-	-	-	paREP1	1.325053	2.947385	1.0237643	2509	Uncharacterized FAD-dependent dehydrogenases	R	conserved hypothetical protein	 1.599790e-02	 1	9.429170e-03	 3.693655e-03	 1.022893e-01	 1.781414e-01	4.634025e-01		 1	23	 TRUE	 TRUE	 70	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.6457313	0.5416419	0.5009016	U	0.4686274	0.5573725
13773	129	182676	182677	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.325053	2.947385	1.0237643	2509	Uncharacterized FAD-dependent dehydrogenases	R	conserved hypothetical protein	1.593140	3.670237	1.1353504	-	-	-	P. aerophilum family 70 protein	 0.000000e+00	 0	7.187037e-02	-1.790825e-02	-1.781614e-01	-7.545607e-01	3.019006e+00		23	 0	 TRUE	 TRUE	 71	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3846295	0.4010478	U	0.4686274	0.6162291
13773	129	182677	182678	1	 -30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.593140	3.670237	1.1353504	-	-	-	P. aerophilum family 70 protein	1.530368	3.332320	1.1476396	-	-	-	P. aerophilum family 68 protein	 0.000000e+00	 0	3.940298e-03	 1.119443e-02	 1.164410e-01	 5.819960e-01	3.035029e-02		 0	 0	FALSE	 TRUE	 70	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7139944	0.6329638	U	0.4686274	0.6162291
13773	129	182678	182679	1	  71	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.530368	3.332320	1.1476396	-	-	-	P. aerophilum family 68 protein	1.444005	3.275801	1.1260071	140	Phosphoribosyl-ATP pyrophosphohydrolase	E	phosphoribosyl-ATP pyrophosphohydrolase	 0.000000e+00	 0	7.458501e-03	-5.834435e-04	-1.784500e-03	 1.724046e-02	4.295630e-01		 0	 0	FALSE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178886	0.5075206	U	0.4686274	0.6162291
13773	129	182679	182680	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.444005	3.275801	1.1260071	140	Phosphoribosyl-ATP pyrophosphohydrolase	E	phosphoribosyl-ATP pyrophosphohydrolase	1.410435	3.134864	1.0727137	141	Histidinol dehydrogenase	E	histidinol dehydrogenase (hisD)	 0.000000e+00	 0	1.126987e-03	 3.025882e-04	 2.839728e-02	-7.852473e-03	1.124797e-01	E	 0	39	FALSE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192694	0.6023797	Y	1.4497162	0.7118045
13773	129	182680	182681	1	  -3	Same	-	-	27.665484	0	 74.495563	 72.15469778	1.410435	3.134864	1.0727137	141	Histidinol dehydrogenase	E	histidinol dehydrogenase (hisD)	1.446348	3.093873	1.0354113	107	Imidazoleglycerol-phosphate synthase	E	histidine biosynthesis protein (hisF,cyclase)	 2.781752e-01	39	1.289786e-03	 2.066243e-04	 1.895798e-02	-1.403927e-02	1.262621e-01	E	39	53	FALSE	 TRUE	 67	 TRUE	2.2022561	2.0566053	0.5480306	2.1155991	0.7736367	1.2068002	0.5171033	0.5992342	Y	1.4497162	0.9358775
13773	129	182681	182682	1	  58	Divergent	-	+	37.020747	0	 82.487098	 81.30900550	1.446348	3.093873	1.0354113	107	Imidazoleglycerol-phosphate synthase	E	histidine biosynthesis protein (hisF,cyclase)	1.340967	2.960476	1.0360942	131	Imidazoleglycerol-phosphate dehydratase	E	imidazoleglycerol-phosphate dehydratase	 4.479544e-01	49	1.110514e-02	 5.570690e-04	 5.815279e-02	-3.746122e-02	7.614337e-01	E	53	49	FALSE	 TRUE	 66	FALSE	2.1285374	2.0654173	0.5480306	2.0895980	0.7715903	1.2560189	0.5096928	0.4584148	Y	1.4497162	0.9370890
13773	129	182682	182683	1	  -3	Same	+	+	35.357409	0	 57.105356	 56.92724193	1.340967	2.960476	1.0360942	131	Imidazoleglycerol-phosphate dehydratase	E	imidazoleglycerol-phosphate dehydratase	1.416831	3.047639	1.0442810	106	Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase	E	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA)	 2.329949e-01	30	5.755339e-03	 3.816498e-03	 3.742840e-02	 2.044494e-01	3.366315e-01	E	49	30	 TRUE	 TRUE	 67	 TRUE	2.1369229	2.0456300	0.5480306	2.1745431	0.7754515	1.1678826	0.5511204	0.5289643	Y	1.4497162	0.9355235
13773	129	182683	182684	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.416831	3.047639	1.0442810	106	Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase	E	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA)	1.642053	3.602602	1.1115853	-	-	-	hypothetical protein	 0.000000e+00	 0	5.072494e-02	-6.589543e-03	 3.297198e-02	-2.281564e-01	1.369780e+00		30	 0	 TRUE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4575477	0.4210285	U	0.4686274	0.6162291
13773	129	182684	182685	1	 291	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.642053	3.602602	1.1115853	-	-	-	hypothetical protein	1.513423	3.425232	1.1098669	5550	Predicted aspartyl protease	O	conserved within P. aerophilum	 0.000000e+00	 0	1.654560e-02	 1.182677e-02	 7.647654e-02	 5.392144e-01	1.150683e-01		 0	 0	 TRUE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6923287	0.6018877	U	0.4686274	0.6162291
13773	129	182685	182686	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.513423	3.425232	1.1098669	5550	Predicted aspartyl protease	O	conserved within P. aerophilum	1.622375	3.415117	1.0672559	-	-	-	hypothetical protein	 0.000000e+00	 0	1.187039e-02	 1.060611e-02	 2.092179e-01	 5.253194e-01	9.949352e-02		 0	 0	 TRUE	 TRUE	 70	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6866719	0.6070283	U	0.4686274	0.6162291
13773	129	182686	182687	1	  22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.622375	3.415117	1.0672559	-	-	-	hypothetical protein	1.512460	3.214004	1.0064744	-	-	-	hypothetical protein	 0.000000e+00	 0	1.208118e-02	 1.044144e-02	 7.805032e-02	 5.211776e-01	1.024196e-01		 0	 0	FALSE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6848113	0.6055846	U	0.4686274	0.6162291
13773	129	182687	182688	1	 172	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.512460	3.214004	1.0064744	-	-	-	hypothetical protein	1.315458	2.745554	0.9626081	1690	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.881001e-02	-8.301216e-03	-3.886700e-02	-5.251798e-01	2.207608e+00		 0	30	FALSE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4014305	0.4056432	U	0.4686274	0.6162291
13773	129	182688	182689	1	 242	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.315458	2.745554	0.9626081	1690	Uncharacterized conserved protein	S	conserved hypothetical protein	1.463640	3.280045	1.1364583	-	-	-	P. aerophilum family 59 protein	 0.000000e+00	 0	2.195792e-02	-1.664796e-03	-4.527258e-02	-1.912907e-01	1.248630e+00		30	 0	FALSE	 TRUE	 67	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4669349	0.4260499	U	0.4686274	0.6162291
13773	129	182689	182690	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.463640	3.280045	1.1364583	-	-	-	P. aerophilum family 59 protein	1.421901	3.382272	1.1026995	-	-	-	P. aerophilum family 3 protein	 0.000000e+00	 0	1.742158e-03	-3.611905e-04	 1.834249e-02	-4.373283e-02	1.749461e-01		 0	 0	 TRUE	 TRUE	 68	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5079782	0.5862680	U	0.4686274	0.6162291
13773	129	182690	182691	1	 141	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.421901	3.382272	1.1026995	-	-	-	P. aerophilum family 3 protein	1.454681	3.286754	1.0352762	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.074530e-03	-9.696579e-05	 1.742256e-02	-2.639873e-02	1.119655e-01		 0	 0	 TRUE	 TRUE	 69	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5131973	0.6025456	U	0.4686274	0.6162291
13773	129	182691	182692	1	  27	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.454681	3.286754	1.0352762	-	-	-	conserved within P. aerophilum	1.420623	3.102787	1.0536346	1506	Dipeptidyl aminopeptidases/acylaminoacyl-peptidases	E	acylamino-acid-releasing enzyme, conjectural	 0.000000e+00	 0	1.159956e-03	-1.011680e-04	 2.193179e-02	-2.708314e-02	1.155896e-01		 0	15	 TRUE	 TRUE	 70	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5129980	0.6017256	U	0.4686274	0.6162291
13773	129	182692	182693	1	  -7	Same	+	+	 0.000000	0	  0.000000	 -1.73042047	1.420623	3.102787	1.0536346	1506	Dipeptidyl aminopeptidases/acylaminoacyl-peptidases	E	acylamino-acid-releasing enzyme, conjectural	1.312403	2.917719	1.0312545	252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	EJ	asparaginase (asnA)	 6.227658e-02	15	1.171144e-02	 4.276752e-03	 1.173968e-01	 1.948028e-01	4.952789e-01		15	31	 TRUE	 TRUE	 71	 TRUE	0.4469764	0.1996263	0.5480306	0.4469764	0.7783720	0.8934079	0.5478867	0.4929568	U	0.4686274	0.5254044
13773	129	182693	182694	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.31372225	1.312403	2.917719	1.0312545	252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	EJ	asparaginase (asnA)	1.382970	2.975164	0.9960716	1896	Predicted hydrolases of HD superfamily	R	conserved hypothetical protein	 3.646849e-02	 3	4.979749e-03	 9.510002e-03	 9.476174e-02	 5.140826e-01	1.262621e-01		31	 3	 TRUE	 TRUE	 72	 TRUE	0.4469764	0.2527773	0.5480306	0.4469764	0.7136133	0.7811886	0.6793058	0.5992342	U	0.4686274	0.5422555
13773	129	182694	182695	1	1576	Convergent	+	-	 0.000000	0	  0.000000	 -0.31372225	1.382970	2.975164	0.9960716	1896	Predicted hydrolases of HD superfamily	R	conserved hypothetical protein	1.359250	2.988814	1.0025213	1779	C4-type Zn-finger protein	R	conserved hypothetical protein	 8.710900e-02	 3	5.626774e-04	 6.304654e-03	 1.041258e-01	 4.077355e-01	2.748012e-02		 3	10	 TRUE	 TRUE	 73	FALSE	0.4469764	0.2527773	0.5480306	0.4469764	0.7136133	0.9694943	0.6375549	0.6342472	U	0.4686274	0.5422555
13773	129	182695	182696	1	  17	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.359250	2.988814	1.0025213	1779	C4-type Zn-finger protein	R	conserved hypothetical protein	1.290763	3.298811	1.1691488	-	-	-	hypothetical protein	 0.000000e+00	 0	4.690379e-03	 1.480091e-02	 2.377568e-01	 6.994532e-01	5.551213e-02		10	 0	FALSE	 TRUE	 72	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7514208	0.6218902	U	0.4686274	0.6162291
13773	129	182696	182697	1	  39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.290763	3.298811	1.1691488	-	-	-	hypothetical protein	1.372265	3.123377	1.0681178	-	-	-	hypothetical protein	 0.000000e+00	 0	6.642500e-03	 1.271029e-02	 1.197264e-01	 6.189459e-01	1.019290e-01		 0	 0	 TRUE	 TRUE	 73	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7259714	0.6058668	U	0.4686274	0.6162291
13773	129	182697	182698	1	 -38	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.372265	3.123377	1.0681178	-	-	-	hypothetical protein	1.400388	3.093652	1.0581459	1608	Predicted archaeal kinase	R	conserved hypothetical protein	 0.000000e+00	 0	7.909327e-04	 4.035880e-03	 5.863228e-02	 2.680125e-01	5.125724e-02		 0	11	 TRUE	 TRUE	 74	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5773974	0.6234508	U	0.4686274	0.6162291
13773	129	182698	182699	1	   0	Same	-	-	18.262480	0	 18.262480	 17.91017974	1.400388	3.093652	1.0581459	1608	Predicted archaeal kinase	R	conserved hypothetical protein	1.340160	2.875683	1.0205043	142	Geranylgeranyl pyrophosphate synthase	H	polyprenyl synthetase	 2.367901e-02	11	3.627497e-03	 5.673388e-03	 1.118870e-01	 3.466892e-01	1.723875e-01		11	51	FALSE	 TRUE	 73	 TRUE	2.4772945	1.8965654	0.5480306	2.6365810	0.7764261	0.6990558	0.6114678	0.5871112	U	0.4686274	0.8820605
13773	129	182699	182700	1	 295	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.340160	2.875683	1.0205043	142	Geranylgeranyl pyrophosphate synthase	H	polyprenyl synthetase	1.631280	3.540304	1.1284556	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	8.475087e-02	-2.000939e-02	-1.624618e-01	-7.610562e-01	3.051095e+00		51	 0	FALSE	 TRUE	 72	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3843917	0.4008428	U	0.4686274	0.6162291
13773	129	182700	182701	1	  71	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.631280	3.540304	1.1284556	-	-	-	conserved within P. aerophilum	1.446830	3.429444	1.1177457	1836	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.402159e-02	-8.207481e-04	-7.098255e-02	 4.914569e-02	7.414756e-01		 0	 0	 TRUE	 TRUE	 73	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187718	0.4605849	U	0.4686274	0.6162291
13773	129	182701	182702	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.446830	3.429444	1.1177457	1836	Predicted membrane protein	S	conserved hypothetical protein	1.562573	3.282928	1.0658807	432	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.339630e-02	-5.072668e-04	 4.614447e-02	 4.217789e-02	5.349300e-01		 0	27	 TRUE	 TRUE	 74	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184055	0.4860301	U	0.4686274	0.6162291
13773	129	182702	182703	1	  98	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.562573	3.282928	1.0658807	432	Uncharacterized conserved protein	S	conserved hypothetical protein	1.394990	3.216163	1.0786175	-	-	-	hypothetical protein	 0.000000e+00	 0	2.808397e-02	-6.270866e-03	-7.589487e-02	-3.645375e-01	1.561061e+00		27	 0	 TRUE	 TRUE	 75	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4251715	0.4153650	U	0.4686274	0.6162291
13773	129	182703	182704	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.394990	3.216163	1.0786175	-	-	-	hypothetical protein	1.562783	3.386144	1.0898658	-	-	-	hypothetical protein	 0.000000e+00	 0	2.815445e-02	-6.282718e-03	-2.929100e-02	-3.648938e-01	1.562980e+00		 0	 0	 TRUE	 TRUE	 76	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4249656	0.4152379	U	0.4686274	0.6162291
13773	129	182704	182705	1	  14	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.562783	3.386144	1.0898658	-	-	-	hypothetical protein	1.704333	3.833656	1.1369093	-	-	-	hypothetical protein	 0.000000e+00	 0	2.003646e-02	 2.817499e-02	 4.811326e-01	 7.611504e-01	3.336300e-02		 0	 0	FALSE	 TRUE	 75	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7717256	0.6308211	U	0.4686274	0.6162291
13773	129	182705	182706	1	 180	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.704333	3.833656	1.1369093	-	-	-	hypothetical protein	1.502367	3.411414	1.1061128	611	Thiamine monophosphate kinase	H	thiamine-monophosphate kinase part 2, authentic frameshift	 0.000000e+00	 0	4.079036e-02	 1.289335e-02	 1.561435e-02	 5.039648e-01	2.008801e-01		 0	 0	 TRUE	 TRUE	 76	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6739167	0.5797853	U	0.4686274	0.6162291
13773	129	182706	182707	1	 -21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.502367	3.411414	1.1061128	611	Thiamine monophosphate kinase	H	thiamine-monophosphate kinase part 2, authentic frameshift	1.381357	2.894604	1.0187750	-	-	-	thiamine-monophosphate kinase part 1, authentic frameshift	 0.000000e+00	 0	1.464340e-02	-3.570010e-03	-1.514598e-02	-2.983056e-01	1.196027e+00		 0	 0	 TRUE	 TRUE	 77	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4407641	0.4281178	U	0.4686274	0.6162291
13773	129	182707	182708	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.381357	2.894604	1.0187750	-	-	-	thiamine-monophosphate kinase part 1, authentic frameshift	1.405412	3.259606	1.1195855	-	-	-	hypothetical protein	 0.000000e+00	 0	5.786685e-04	 3.220288e-03	 5.130284e-02	 2.059101e-01	4.584791e-02		 0	 0	 TRUE	 TRUE	 78	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5517838	0.6256408	U	0.4686274	0.6162291
13773	129	182708	182709	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.405412	3.259606	1.1195855	-	-	-	hypothetical protein	1.454341	3.190910	1.0896713	120	Ribose 5-phosphate isomerase	G	ribose 5-phosphate isomerase	 0.000000e+00	 0	2.394031e-03	-1.355674e-04	 1.380564e-02	-4.437955e-02	2.330303e-01		 0	47	 TRUE	 TRUE	 79	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5077392	0.5695312	U	0.4686274	0.6162291
13773	129	182709	182710	1	  21	Same	-	-	 0.000000	0	  0.000000	 -0.65730196	1.454341	3.190910	1.0896713	120	Ribose 5-phosphate isomerase	G	ribose 5-phosphate isomerase	1.460523	3.128197	1.0150979	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 3.631628e-03	 8	3.821733e-05	 2.691976e-05	 2.124207e-02	 2.294840e-02	3.864392e-03		47	 8	FALSE	 TRUE	 78	 TRUE	0.4469764	0.2268782	0.5480306	0.4469764	0.7652913	0.5314351	0.5174784	0.6474175	U	0.4686274	0.5340541
13773	129	182710	182711	1	  97	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.460523	3.128197	1.0150979	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.349174	2.866050	1.0095203	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	 3.137307e-03	 2	1.239863e-02	-9.332967e-04	 3.614812e-02	-1.453874e-01	9.380584e-01		 8	 2	FALSE	 TRUE	 77	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5183257	0.4784126	0.4437091	U	0.4686274	0.6162291
13773	129	182711	182712	1	 944	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.349174	2.866050	1.0095203	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	1.565279	3.517519	1.0823076	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	4.670113e-02	-1.164125e-02	-1.089723e-01	-6.212006e-01	2.484918e+00		 2	 0	 TRUE	 TRUE	 78	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3921807	0.4034139	U	0.4686274	0.6162291
13773	129	182712	182713	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.565279	3.517519	1.0823076	-	-	-	conserved within P. aerophilum	1.514512	3.424481	1.1040097	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	 0.000000e+00	 0	2.577288e-03	 7.188319e-03	 8.196554e-02	 4.683365e-01	4.136213e-02		 0	 0	 TRUE	 TRUE	 79	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6631244	0.6275054	U	0.4686274	0.6162291
13773	129	182713	182714	1	 -16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.514512	3.424481	1.1040097	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	1.369124	2.969132	1.0044779	-	-	-	conserved within P. aerophilum part 2, authentic frameshift	 0.000000e+00	 0	2.113767e-02	-5.192731e-03	-3.290651e-02	-3.931491e-01	1.578369e+00		 0	 0	 TRUE	 TRUE	 80	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4207962	0.4149007	U	0.4686274	0.6162291
13773	129	182714	182715	1	   3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.369124	2.969132	1.0044779	-	-	-	conserved within P. aerophilum part 2, authentic frameshift	1.498859	3.122022	1.0387892	1433	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	1.683129e-02	-3.905007e-03	-3.638713e-02	-3.328219e-01	1.359023e+00		 0	 0	 TRUE	 TRUE	 81	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4314264	0.4219096	U	0.4686274	0.6162291
13773	129	182715	182716	1	  40	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.498859	3.122022	1.0387892	1433	Uncharacterized conserved protein	S	hypothetical protein	1.606924	3.638847	1.1331859	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.167795e-02	 7.382448e-03	 1.627640e-01	 4.386500e-01	1.431545e-01		 0	 0	FALSE	 TRUE	 80	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6511397	0.5946095	U	0.4686274	0.6162291
13773	129	182716	182717	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.606924	3.638847	1.1331859	-	-	-	conserved within P. aerophilum	1.530341	3.485590	1.1496562	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	5.864819e-03	 1.227894e-02	 1.187047e-01	 5.969953e-01	3.920582e-02		 0	 0	 TRUE	 TRUE	 81	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7193180	0.6283810	U	0.4686274	0.6162291
13773	129	182717	182718	1	 133	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.530341	3.485590	1.1496562	-	-	-	conserved within P. aerophilum	1.706809	3.556574	1.1178929	1433	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	3.114076e-02	 2.016475e-02	 4.063521e-01	 6.596172e-01	8.415788e-02		 0	 0	 TRUE	 TRUE	 82	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7391690	0.6127540	U	0.4686274	0.6162291
13773	129	182718	182719	1	  28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.706809	3.556574	1.1178929	1433	Uncharacterized conserved protein	S	hypothetical protein	1.409154	3.095665	1.0528530	1052	Lactate dehydrogenase and related dehydrogenases	CHR	D-3-phosphoglycerate dehydrogenase (serA)	 0.000000e+00	 0	8.859864e-02	-1.078856e-02	-2.665452e-01	-3.119409e-01	1.668320e+00		 0	26	FALSE	 TRUE	 81	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4368493	0.4129302	U	0.4686274	0.6162291
13773	129	182719	182720	1	  91	Divergent	-	+	 0.000000	0	  0.000000	 -0.51148869	1.409154	3.095665	1.0528530	1052	Lactate dehydrogenase and related dehydrogenases	CHR	D-3-phosphoglycerate dehydrogenase (serA)	1.473242	3.278669	1.0770033	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	pyruvate ferredoxin oxidoreductase gamma subunit (porG)	 1.755773e-02	16	4.107274e-03	-9.228779e-04	 6.628586e-03	-9.600079e-02	3.845332e-01		26	16	FALSE	 TRUE	 80	FALSE	0.4469764	0.2340629	0.5480306	0.4469764	0.7783446	0.6580649	0.4934796	0.5154995	U	0.4686274	0.5363313
13773	129	182720	182721	1	  -3	Same	+	+	19.048712	0	 29.442822	 29.44282200	1.473242	3.278669	1.0770033	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	pyruvate ferredoxin oxidoreductase gamma subunit (porG)	1.491217	3.106869	0.9472652	1144	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit	C	pyruvate ferredoxin oxidoreductase delta subunit (porD)	 1.926718e-01	 8	3.231233e-04	 8.701211e-04	 3.372674e-02	 1.340345e-01	2.262681e-02	C	16	 8	 TRUE	 TRUE	 81	 TRUE	2.4102042	1.9689678	0.5480306	2.4371546	0.7652913	1.1363677	0.5258020	0.6365095	Y	1.4497162	0.9271186
13773	129	182721	182722	1	   0	Same	+	+	19.048712	0	 29.442822	 29.44282200	1.491217	3.106869	0.9472652	1144	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit	C	pyruvate ferredoxin oxidoreductase delta subunit (porD)	1.397423	2.985232	1.0640363	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	pyruvate ferredoxin oxidoreductase alpha subunit (porA)	 2.749196e-01	 8	8.797427e-03	-2.149332e-03	-1.023540e-03	-2.008795e-01	8.035203e-01	C	 8	10	 TRUE	 TRUE	 82	 TRUE	2.4102042	1.9689678	0.5480306	2.4371546	0.7652913	1.2035108	0.4642425	0.4550988	Y	1.4497162	0.9271186
13773	129	182722	182723	1	  -3	Same	+	+	21.014824	0	 29.511815	 29.51181487	1.397423	2.985232	1.0640363	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	pyruvate ferredoxin oxidoreductase alpha subunit (porA)	1.398827	3.019774	1.0637480	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	pyruvate ferredoxin oxidoreductase beta subunit (porB)	 2.561589e-01	10	1.973248e-06	 2.836957e-03	 5.352814e-02	 1.933250e-01	2.355978e-04	C	10	11	 TRUE	 TRUE	 83	 TRUE	2.3380363	1.9721625	0.5480306	2.4272596	0.7739415	1.1936934	0.5474130	0.6542630	Y	1.4497162	0.9279933
13773	129	182723	182724	1	  94	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.398827	3.019774	1.0637480	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	pyruvate ferredoxin oxidoreductase beta subunit (porB)	1.356625	2.994717	1.0638980	-	-	-	hypothetical protein	 0.000000e+00	 0	1.781018e-03	 4.981487e-03	 9.477268e-02	 3.199977e-01	9.518385e-02		11	 0	 TRUE	 TRUE	 84	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5994935	0.6086719	U	0.4686274	0.6162291
13773	129	182724	182725	1	  47	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.356625	2.994717	1.0638980	-	-	-	hypothetical protein	1.446952	2.887522	1.0325492	-	-	-	hypothetical protein	 0.000000e+00	 0	8.158888e-03	 4.208542e-04	 2.901508e-03	-4.092333e-02	6.333863e-01		 0	 0	 TRUE	 TRUE	 85	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5088239	0.4724827	U	0.4686274	0.6162291
13773	129	182725	182726	1	 183	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.446952	2.887522	1.0325492	-	-	-	hypothetical protein	1.369313	2.976423	1.0386061	1449	Alpha-amylase/alpha-mannosidase	G	hypothetical protein	 0.000000e+00	 0	6.027848e-03	 3.645108e-04	 4.205862e-02	-3.664016e-02	5.160156e-01		 0	 0	 TRUE	 TRUE	 86	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5101574	0.4905939	U	0.4686274	0.6162291
13773	129	182726	182727	1	  21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.369313	2.976423	1.0386061	1449	Alpha-amylase/alpha-mannosidase	G	hypothetical protein	1.404792	3.418913	1.1918067	477	Permeases of the major facilitator superfamily	GEPR	hypothetical protein	 0.000000e+00	 0	1.258749e-03	 3.825039e-03	 5.386707e-02	 2.417233e-01	8.912722e-02		 0	 0	 TRUE	 TRUE	 87	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5656240	0.6113614	U	0.4686274	0.6162291
13773	129	182727	182728	1	 226	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.404792	3.418913	1.1918067	477	Permeases of the major facilitator superfamily	GEPR	hypothetical protein	1.386069	3.066625	1.0697039	31	Cysteine synthase	E	cysteine synthase	 0.000000e+00	 0	3.505408e-04	 3.044183e-03	 6.165279e-02	 1.972395e-01	3.115780e-02		 0	40	 TRUE	 TRUE	 88	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5488427	0.6322033	U	0.4686274	0.6162291
13773	129	182728	182729	1	 243	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.386069	3.066625	1.0697039	31	Cysteine synthase	E	cysteine synthase	1.403003	3.211531	1.0905413	-	-	-	hypothetical protein	 0.000000e+00	 0	2.867620e-04	 3.161027e-03	 5.280713e-02	 2.092815e-01	2.379596e-02		40	 0	 TRUE	 TRUE	 89	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5536384	0.6358881	U	0.4686274	0.6162291
13773	129	182729	182730	1	  39	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.403003	3.211531	1.0905413	-	-	-	hypothetical protein	1.400545	3.089340	1.0271518	476	Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2	H	thiF/moeB/hesA family protein	 0.000000e+00	 0	6.039088e-06	 2.460505e-03	 5.012592e-02	 1.603007e-01	7.633367e-04		 0	26	FALSE	 TRUE	 88	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5348472	0.6522016	U	0.4686274	0.6162291
13773	129	182730	182731	1	 196	Divergent	-	+	 0.000000	0	  0.000000	 -2.88741881	1.400545	3.089340	1.0271518	476	Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2	H	thiF/moeB/hesA family protein	1.420262	3.060212	1.0600504	584	Glycerophosphoryl diester phosphodiesterase	C	glycerophosphoryl diester phosphodiesterase	 2.662582e-04	26	3.887540e-04	 1.582910e-03	 3.514078e-02	 9.032818e-02	3.860034e-02	0	26	33	FALSE	 TRUE	 87	FALSE	0.4469764	0.1920291	0.5480306	0.4469764	0.7764129	0.4459260	0.5178383	0.6286000	N	0.5492530	0.5318098
13773	129	182731	182732	1	 652	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.420262	3.060212	1.0600504	584	Glycerophosphoryl diester phosphodiesterase	C	glycerophosphoryl diester phosphodiesterase	1.605405	3.720598	1.1115991	1195	Recombinational DNA repair ATPase (RecF pathway)	L	partial recF homolog	 0.000000e+00	 0	3.427793e-02	-4.794496e-03	 2.245475e-02	-1.905256e-01	1.192672e+00	0	33	 0	 TRUE	 TRUE	 88	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4672140	0.4285596	N	0.5492530	0.6245624
13773	129	182732	182733	1	 643	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.605405	3.720598	1.1115991	1195	Recombinational DNA repair ATPase (RecF pathway)	L	partial recF homolog	1.401837	3.362028	1.1693107	4986	ABC-type anion transport system, duplicated permease component	P	sulfonate transport permease protein, putative	 0.000000e+00	 0	4.143998e-02	-7.632194e-03	-1.225003e-01	-3.495205e-01	1.623033e+00	0	 0	 0	 TRUE	 TRUE	 89	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4280275	0.4140690	N	0.5492530	0.6245624
13773	129	182733	182734	1	 -39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.401837	3.362028	1.1693107	4986	ABC-type anion transport system, duplicated permease component	P	sulfonate transport permease protein, putative	1.350582	3.007226	1.0209557	1116	ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	P	taurine(sulfate) transport ATP-binding protein, putative	 0.000000e+00	 0	2.627054e-03	 4.995736e-03	 9.872120e-02	 3.093210e-01	1.396912e-01	P	 0	38	 TRUE	 TRUE	 90	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5958996	0.5958874	Y	1.4497162	0.7118045
13773	129	182734	182735	1	  58	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.350582	3.007226	1.0209557	1116	ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	P	taurine(sulfate) transport ATP-binding protein, putative	1.497088	3.358887	1.1544612	-	-	-	P. aerophilum family 59 protein	 0.000000e+00	 0	2.146386e-02	-4.606534e-03	-5.362903e-02	-3.752224e-01	1.584159e+00		38	 0	 TRUE	 TRUE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4241395	0.4148168	U	0.4686274	0.6162291
13773	129	182735	182736	1	 -19	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.497088	3.358887	1.1544612	-	-	-	P. aerophilum family 59 protein	1.542961	3.620894	1.1577112	-	-	-	P. aerophilum family 3 protein	 0.000000e+00	 0	2.104363e-03	 4.184212e-03	 8.565126e-02	 3.510265e-01	5.696813e-02		 0	 0	 TRUE	 TRUE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6131154	0.6214366	U	0.4686274	0.6162291
13773	129	182736	182737	1	  66	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.542961	3.620894	1.1577112	-	-	-	P. aerophilum family 3 protein	1.429811	3.103309	1.0366692	4754	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	1.280290e-02	-1.976189e-03	-2.247882e-02	-8.664579e-02	7.113880e-01		 0	 2	 TRUE	 TRUE	 93	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4963411	0.4636452	U	0.4686274	0.6162291
13773	129	182737	182738	1	  76	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.429811	3.103309	1.0366692	4754	Uncharacterized conserved protein	S	hypothetical protein	1.476399	3.068366	1.0652576	361	Translation initiation factor 1 (IF-1)	J	translation initiation factor aIF-1A	 2.318180e-03	 2	2.170426e-03	-5.396745e-04	 1.483284e-02	-3.950974e-02	2.022583e-01		 2	 6	FALSE	 TRUE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5012279	0.5092261	0.5792906	U	0.4686274	0.6162291
13773	129	182738	182739	1	  51	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.476399	3.068366	1.0652576	361	Translation initiation factor 1 (IF-1)	J	translation initiation factor aIF-1A	1.549524	3.379409	1.1006363	-	-	-	hypothetical protein	 0.000000e+00	 0	5.347184e-03	 2.453881e-03	 7.229570e-02	 2.444032e-01	1.685849e-01		 6	 0	FALSE	 TRUE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5676432	0.5880602	U	0.4686274	0.6162291
13773	129	182739	182740	1	 -49	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.549524	3.379409	1.1006363	-	-	-	hypothetical protein	1.552175	3.276414	1.0706485	-	-	-	hypothetical protein	 0.000000e+00	 0	7.031621e-06	 9.889848e-03	 1.377121e-01	 5.547385e-01	7.126832e-05		 0	 0	FALSE	 TRUE	 90	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7012158	0.6552829	U	0.4686274	0.6162291
13773	129	182740	182741	1	 176	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.552175	3.276414	1.0706485	-	-	-	hypothetical protein	1.439088	3.033542	1.0392420	-	-	-	paREP2b	 0.000000e+00	 0	1.278865e-02	-1.240076e-03	-1.917118e-02	-1.667090e-02	5.948991e-01		 0	 0	FALSE	 TRUE	 89	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5163968	0.4773691	U	0.4686274	0.6162291
13773	129	182741	182742	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.439088	3.033542	1.0392420	-	-	-	paREP2b	1.348284	2.953619	1.0169013	675	Transposase and inactivated derivatives	L	hypothetical protein	 0.000000e+00	 0	8.245482e-03	 1.268705e-03	 6.218603e-02	 1.755910e-02	5.878170e-01		 0	 0	 TRUE	 TRUE	 90	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178366	0.4784697	U	0.4686274	0.6162291
13773	129	182742	182743	1	 168	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.348284	2.953619	1.0169013	675	Transposase and inactivated derivatives	L	hypothetical protein	1.492964	3.322962	1.1520251	-	-	-	P. aerophilum family 66 protein	 0.000000e+00	 0	2.093227e-02	-4.286326e-03	-5.198940e-02	-3.602643e-01	1.551487e+00		 0	 0	 TRUE	 TRUE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4259926	0.4155777	U	0.4686274	0.6162291
13773	129	182743	182744	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.492964	3.322962	1.1520251	-	-	-	P. aerophilum family 66 protein	1.604045	3.866662	1.1900898	-	-	-	P. aerophilum family 79 protein	 0.000000e+00	 0	1.233914e-02	 6.345880e-03	 1.497245e-01	 3.981131e-01	1.723875e-01		 0	 0	 TRUE	 TRUE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6338990	0.5871112	U	0.4686274	0.6162291
13773	129	182744	182745	1	  33	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.604045	3.866662	1.1900898	-	-	-	P. aerophilum family 79 protein	1.408824	3.210589	1.1297077	-	-	-	P. aerophilum family 68 protein	 0.000000e+00	 0	3.811136e-02	-6.498239e-03	-1.098173e-01	-2.823592e-01	1.429704e+00		 0	 0	 TRUE	 TRUE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4448920	0.4190403	U	0.4686274	0.6162291
13773	129	182745	182746	1	  80	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.408824	3.210589	1.1297077	-	-	-	P. aerophilum family 68 protein	1.423295	3.498138	1.1029672	-	-	-	P. aerophilum family 70 protein	 0.000000e+00	 0	2.094213e-04	 1.196076e-03	 3.212555e-02	 6.164180e-02	1.783239e-02		 0	 0	 TRUE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184341	0.6388731	U	0.4686274	0.6162291
13773	129	182746	182747	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.423295	3.498138	1.1029672	-	-	-	P. aerophilum family 70 protein	1.423804	3.164891	1.0578578	1533	DNA repair photolyase	L	conserved hypothetical protein	 0.000000e+00	 0	2.584281e-07	 7.751834e-04	 2.972946e-02	 3.549516e-02	1.472486e-05		 0	 7	 TRUE	 TRUE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176096	0.6556702	U	0.4686274	0.6162291
13773	129	182747	182748	1	  10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.423804	3.164891	1.0578578	1533	DNA repair photolyase	L	conserved hypothetical protein	1.408704	3.043933	1.0620728	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	 0.000000e+00	 0	2.280066e-04	 1.177750e-03	 3.720318e-02	 6.068527e-02	1.929605e-02	0	 7	 0	FALSE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185056	0.6380078	N	0.5492530	0.6245624
13773	129	182748	182749	1	 -30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.408704	3.043933	1.0620728	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	1.486801	3.266287	1.0613737	-	-	-	hypothetical protein	 0.000000e+00	 0	6.099198e-03	-1.511548e-03	 1.620295e-03	-1.378530e-01	5.610619e-01		 0	 0	FALSE	 TRUE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4797797	0.4821849	U	0.4686274	0.6162291
13773	129	182749	182750	1	 133	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.486801	3.266287	1.0613737	-	-	-	hypothetical protein	1.411744	3.067827	1.0781635	2129	Predicted phosphoesterases, related to the Icc protein	R	conserved hypothetical protein	 0.000000e+00	 0	5.633568e-03	-1.403897e-03	 5.131177e-03	-1.258233e-01	5.193287e-01		 0	 7	FALSE	 TRUE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4831907	0.4896794	U	0.4686274	0.6162291
13773	129	182750	182751	1	 248	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.411744	3.067827	1.0781635	2129	Predicted phosphoesterases, related to the Icc protein	R	conserved hypothetical protein	1.485897	3.336971	1.1473931	-	-	-	P. aerophilum family 59 protein	 0.000000e+00	 0	5.498714e-03	-1.368063e-03	 3.773209e-03	-1.233160e-01	5.072326e-01		 7	 0	FALSE	 TRUE	 91	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4840294	0.4918136	U	0.4686274	0.6162291
13773	129	182751	182752	1	 -22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.485897	3.336971	1.1473931	-	-	-	P. aerophilum family 59 protein	1.437743	3.585480	1.1131465	-	-	-	P. aerophilum family 3 protein	 0.000000e+00	 0	2.318828e-03	-4.709744e-04	 1.268061e-02	-1.625094e-02	2.064213e-01		 0	 0	 TRUE	 TRUE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5166788	0.5777522	U	0.4686274	0.6162291
13773	129	182752	182753	1	 603	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.437743	3.585480	1.1131465	-	-	-	P. aerophilum family 3 protein	1.521212	3.489115	1.1866354	-	-	-	P. aerophilum family 66 protein	 0.000000e+00	 0	6.967056e-03	-9.530059e-04	 2.150116e-02	-2.466178e-02	4.478619e-01		 0	 0	 TRUE	 TRUE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5139987	0.5041686	U	0.4686274	0.6162291
13773	129	182753	182754	1	  17	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.521212	3.489115	1.1866354	-	-	-	P. aerophilum family 66 protein	1.446668	3.597825	1.1322625	-	-	-	P. aerophilum family 79 protein	 0.000000e+00	 0	5.556887e-03	-3.299137e-04	 4.557523e-03	 3.143169e-02	3.366315e-01		 0	 0	 TRUE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174075	0.5289643	U	0.4686274	0.6162291
13773	129	182754	182755	1	 901	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.446668	3.597825	1.1322625	-	-	-	P. aerophilum family 79 protein	1.489166	3.324757	1.0970174	705	Uncharacterized membrane protein (homolog of Drosophila rhomboid)	R	integral membrane protein (rhomboid related), putative	 0.000000e+00	 0	1.806119e-03	-1.784880e-04	 2.221747e-02	 2.178396e-02	1.496140e-01		 0	26	 TRUE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175495	0.5933123	U	0.4686274	0.6162291
13773	129	182755	182756	1	  96	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.489166	3.324757	1.0970174	705	Uncharacterized membrane protein (homolog of Drosophila rhomboid)	R	integral membrane protein (rhomboid related), putative	1.526451	3.313851	1.0703465	-	-	-	hypothetical protein	 0.000000e+00	 0	1.390138e-03	 2.835173e-03	 6.457067e-02	 2.875482e-01	4.919340e-02		26	 0	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5879045	0.6240491	U	0.4686274	0.6162291
13773	129	182756	182757	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.526451	3.313851	1.0703465	-	-	-	hypothetical protein	1.650153	3.914203	1.1667642	-	-	-	hypothetical protein	 0.000000e+00	 0	1.530236e-02	 1.491852e-02	 2.811875e-01	 6.140090e-01	7.506675e-02		 0	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7242977	0.6163909	U	0.4686274	0.6162291
13773	129	182757	182758	1	  80	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.650153	3.914203	1.1667642	-	-	-	hypothetical protein	1.468636	3.217772	1.0480771	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	3.294867e-02	 3.427182e-03	-3.876083e-02	 2.375886e-01	4.592325e-01		 0	 0	 TRUE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5638495	0.5023186	U	0.4686274	0.6162291
13773	129	182758	182759	1	 165	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.468636	3.217772	1.0480771	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.428216	3.248849	1.1078638	1585	Membrane protein implicated in regulation of membrane protease activity	OU	conserved hypothetical protein	 0.000000e+00	 0	1.633782e-03	-3.996409e-04	 1.667414e-02	-3.500276e-02	1.537988e-01		 0	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5106866	0.5921731	U	0.4686274	0.6162291
13773	129	182759	182760	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.428216	3.248849	1.1078638	1585	Membrane protein implicated in regulation of membrane protease activity	OU	conserved hypothetical protein	1.530134	3.545377	1.1779607	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	 0.000000e+00	 0	1.038740e-02	-1.825011e-03	 1.378042e-02	-9.320012e-02	6.655454e-01		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4944289	0.4693615	U	0.4686274	0.6162291
13773	129	182760	182761	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.530134	3.545377	1.1779607	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	1.374226	2.914265	1.0411916	495	Leucyl-tRNA synthetase	J	leucyl-tRNA synthetase	 0.000000e+00	 0	2.430736e-02	-6.076219e-03	-5.093056e-02	-4.305950e-01	1.724293e+00		 0	12	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4141517	0.4118977	U	0.4686274	0.6162291
13773	129	182761	182762	1	   2	Convergent	+	-	 0.000000	0	  0.000000	 -0.56248240	1.374226	2.914265	1.0411916	495	Leucyl-tRNA synthetase	J	leucyl-tRNA synthetase	1.415167	3.134178	1.1263163	1110	Reverse gyrase	L	reverse gyrase	 9.541988e-02	 9	1.676146e-03	 2.795452e-03	 4.163350e-02	 1.646392e-01	1.408409e-01	0	12	 9	 TRUE	 TRUE	100	FALSE	0.4469764	0.2322970	0.5480306	0.4469764	0.7702221	0.9963746	0.5362258	0.5955598	N	0.5492530	0.5445608
13773	129	182762	182763	1	 438	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.415167	3.134178	1.1263163	1110	Reverse gyrase	L	reverse gyrase	1.308759	2.716740	0.9035618	-	-	-	hypothetical protein	 0.000000e+00	 0	1.132271e-02	 5.167082e-03	 1.294851e-01	 2.404888e-01	4.458099e-01		 9	 0	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5650280	0.5046098	U	0.4686274	0.6162291
13773	129	182763	182764	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.308759	2.716740	0.9035618	-	-	-	hypothetical protein	1.448597	3.097677	1.0341256	2110	Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1	R	conserved hypothetical protein	 0.000000e+00	 0	1.955486e-02	 3.987504e-04	-2.624532e-02	-6.403547e-02	9.923401e-01		 0	23	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5027918	0.4398511	U	0.4686274	0.6162291
13773	129	182764	182765	1	 131	Divergent	-	+	 0.000000	0	  0.000000	 -0.27723266	1.448597	3.097677	1.0341256	2110	Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1	R	conserved hypothetical protein	1.400700	3.060366	1.0513164	1032	Fe-S oxidoreductase	C	hypothetical protein	 3.242514e-02	 2	2.294107e-03	 1.417165e-04	 2.890067e-02	-2.846610e-02	2.315508e-01		23	 2	FALSE	 TRUE	 99	FALSE	0.4469764	0.2571217	0.5480306	0.4469764	0.6838149	0.7502724	0.5126666	0.5704308	U	0.4686274	0.5436291
13773	129	182765	182766	1	  82	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.400700	3.060366	1.0513164	1032	Fe-S oxidoreductase	C	hypothetical protein	1.382614	2.994419	1.0212858	417	DNA polymerase elongation subunit (family B)	L	possible DNA-directed DNA polymerase (B2)	 0.000000e+00	 0	3.271033e-04	 3.486548e-03	 6.699063e-02	 2.324731e-01	2.309094e-02	0	 2	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5621143	0.6362005	N	0.5492530	0.6245624
13773	129	182766	182767	1	  39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.382614	2.994419	1.0212858	417	DNA polymerase elongation subunit (family B)	L	possible DNA-directed DNA polymerase (B2)	1.464245	3.366553	1.0934311	-	-	-	hypothetical protein	 0.000000e+00	 0	6.663477e-03	-8.839185e-04	-1.190976e-03	-1.207821e-01	6.056017e-01		 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4847443	0.4761308	U	0.4686274	0.6162291
13773	129	182767	182768	1	 -23	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.464245	3.366553	1.0934311	-	-	-	hypothetical protein	1.252314	2.896666	1.1504068	-	-	-	hypothetical protein	 0.000000e+00	 0	4.491471e-02	-2.558502e-03	 9.105072e-02	-2.113277e-01	1.442580e+00		 0	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4611764	0.4187637	U	0.4686274	0.6162291
13773	129	182768	182769	1	  45	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.252314	2.896666	1.1504068	-	-	-	hypothetical protein	1.402844	3.000575	0.9637167	-	-	-	paREP1, authentic frameshift	 0.000000e+00	 0	2.265932e-02	 9.665121e-03	 3.908346e-02	 3.832681e-01	3.583442e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6264635	0.5224252	U	0.4686274	0.6162291
13773	129	182769	182770	1	  73	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.402844	3.000575	0.9637167	-	-	-	paREP1, authentic frameshift	1.378027	3.063042	1.0616944	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	 0.000000e+00	 0	6.158838e-04	 3.561860e-03	 7.006742e-02	 2.327623e-01	4.454270e-02		 0	 2	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5623052	0.6261253	U	0.4686274	0.6162291
13773	129	182770	182771	1	 485	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.378027	3.063042	1.0616944	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	1.499093	3.332686	1.1280361	705	Uncharacterized membrane protein (homolog of Drosophila rhomboid)	R	integral membrane protein (rhomboid related), putative	 0.000000e+00	 0	1.465705e-02	-3.499576e-03	-2.807130e-02	-3.013030e-01	1.214563e+00		 2	 0	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4402131	0.4277879	U	0.4686274	0.6162291
13773	129	182771	182772	1	  13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.499093	3.332686	1.1280361	705	Uncharacterized membrane protein (homolog of Drosophila rhomboid)	R	integral membrane protein (rhomboid related), putative	1.381853	3.091054	1.0379766	-	-	-	hypothetical protein	 0.000000e+00	 0	1.374527e-02	-3.317072e-03	-1.154400e-02	-2.870288e-01	1.152780e+00		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4432972	0.4304608	U	0.4686274	0.6162291
13773	129	182772	182773	1	 133	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.381853	3.091054	1.0379766	-	-	-	hypothetical protein	1.472582	3.280016	1.1227029	667	Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)	C	conserved hypothetical protein	 0.000000e+00	 0	8.231700e-03	-1.473461e-03	-7.630897e-03	-1.656441e-01	7.414756e-01		 0	 4	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4734249	0.4605849	U	0.4686274	0.6162291
13773	129	182773	182774	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.472582	3.280016	1.1227029	667	Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)	C	conserved hypothetical protein	1.452862	3.339382	1.1627268	2245	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.888459e-04	 3.113661e-05	 1.996709e-02	 3.295070e-02	3.115780e-02		 4	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174873	0.6322033	U	0.4686274	0.6162291
13773	129	182774	182775	1	  25	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.452862	3.339382	1.1627268	2245	Predicted membrane protein	S	conserved hypothetical protein	1.381880	3.087929	1.0385853	-	-	-	hypothetical protein	 0.000000e+00	 0	5.038425e-03	-1.021480e-04	 3.180869e-02	-6.476818e-02	4.675915e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5027134	0.4996268	U	0.4686274	0.6162291
13773	129	182775	182776	1	  73	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.381880	3.087929	1.0385853	-	-	-	hypothetical protein	1.355417	2.908650	1.0147385	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	flavoprotein reductase, conjectural	 0.000000e+00	 0	7.002936e-04	 6.671480e-03	 1.098638e-01	 4.266823e-01	3.170203e-02		 0	 1	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6463129	0.6317872	U	0.4686274	0.6162291
13773	129	182776	182777	1	 344	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.355417	2.908650	1.0147385	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	flavoprotein reductase, conjectural	1.384111	3.325076	1.1348392	-	-	-	hypothetical protein	 0.000000e+00	 0	8.233017e-04	 6.457438e-03	 8.434382e-02	 4.157711e-01	3.710724e-02		 1	 0	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6418935	0.6290639	U	0.4686274	0.6162291
13773	129	182777	182778	1	 390	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.384111	3.325076	1.1348392	-	-	-	hypothetical protein	1.434671	3.251517	1.1101294	1798	Diphthamide biosynthesis methyltransferase	J	diphthine synthase (dph5)	 0.000000e+00	 0	2.556319e-03	 1.125102e-03	 2.310674e-02	 3.582028e-02	2.412521e-01		 0	12	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176997	0.5655296	U	0.4686274	0.6162291
13773	129	182778	182779	1	  43	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.434671	3.251517	1.1101294	1798	Diphthamide biosynthesis methyltransferase	J	diphthine synthase (dph5)	1.530303	3.419668	1.0994041	-	-	-	hypothetical protein	 0.000000e+00	 0	9.145594e-03	-1.319552e-03	 2.041217e-02	-4.378584e-02	5.530428e-01		12	 0	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5078759	0.4833863	U	0.4686274	0.6162291
13773	129	182779	182780	1	   1	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.530303	3.419668	1.0994041	-	-	-	hypothetical protein	1.400296	3.024883	1.0344918	-	-	-	hypothetical protein	 0.000000e+00	 0	1.690194e-02	-4.032088e-03	-3.558937e-02	-2.851292e-01	1.207806e+00		 0	 0	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4438318	0.4278978	U	0.4686274	0.6162291
13773	129	182780	182781	1	  30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.400296	3.024883	1.0344918	-	-	-	hypothetical protein	1.487798	3.312719	1.1020946	101	Pseudouridylate synthase	J	tRNA pseudouridine synthase A	 0.000000e+00	 0	7.656713e-03	-1.860219e-03	-4.277137e-03	-1.804208e-01	7.217826e-01		 0	57	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4702327	0.4627534	U	0.4686274	0.6162291
13773	129	182781	182782	1	  27	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.487798	3.312719	1.1020946	101	Pseudouridylate synthase	J	tRNA pseudouridine synthase A	1.501038	3.332284	1.1261665	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	conserved protein (acetyltransferase)	 0.000000e+00	 0	1.752808e-04	 1.807359e-03	 4.476299e-02	 2.203310e-01	6.870031e-03		57	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5571308	0.6445676	U	0.4686274	0.6162291
13773	129	182782	182783	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.501038	3.332284	1.1261665	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	conserved protein (acetyltransferase)	1.550055	3.115371	1.0309009	-	-	-	hypothetical protein	 0.000000e+00	 0	2.402676e-03	 4.898082e-03	 9.646861e-02	 3.800710e-01	5.230506e-02		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6250051	0.6231515	U	0.4686274	0.6162291
13773	129	182783	182784	1	 111	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.550055	3.115371	1.0309009	-	-	-	hypothetical protein	1.460413	3.292077	1.1529629	2084	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	I	conserved protein (3-hydroxyisobutyrate dehydrogenase family)	 0.000000e+00	 0	8.035761e-03	 8.899032e-04	 6.629171e-03	 1.371214e-01	3.095902e-01		 0	40	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5268464	0.5385067	U	0.4686274	0.6162291
13773	129	182784	182785	1	  45	Divergent	-	+	 0.000000	0	  0.000000	 -3.80211706	1.460413	3.292077	1.1529629	2084	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	I	conserved protein (3-hydroxyisobutyrate dehydrogenase family)	1.398518	3.052253	1.0454617	1156	Archaeal/vacuolar-type H+-ATPase subunit B	C	H+-transporting ATP synthase subunit B (atpB)	 1.171292e-03	40	3.830901e-03	-4.769130e-04	 2.205464e-02	-8.034237e-02	3.835820e-01	0	40	46	FALSE	 TRUE	 99	FALSE	0.4469764	0.1852950	0.5480306	0.4469764	0.7733221	0.4770312	0.4978615	0.5159995	N	0.5492530	0.5296729
13773	129	182785	182786	1	 202	Same	+	+	 0.000000	0	  0.000000	 -0.13150953	1.398518	3.052253	1.0454617	1156	Archaeal/vacuolar-type H+-ATPase subunit B	C	H+-transporting ATP synthase subunit B (atpB)	1.450152	2.893411	0.9949132	-	-	-	conserved hypothetical protein	 1.307697e-02	 2	2.666045e-03	 6.560696e-05	 1.440894e-02	-3.667079e-02	2.691563e-01		46	 2	 TRUE	 TRUE	100	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.6236374	0.5100912	0.5538632	U	0.4686274	0.5537552
13773	129	182786	182787	1	 295	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.450152	2.893411	0.9949132	-	-	-	conserved hypothetical protein	1.439250	3.257969	1.0375586	-	-	-	hypothetical protein	 0.000000e+00	 0	1.188651e-04	 1.506749e-05	 2.128443e-02	-1.360577e-03	1.010773e-02		 2	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199831	0.6427221	U	0.4686274	0.6162291
13773	129	182787	182788	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.439250	3.257969	1.0375586	-	-	-	hypothetical protein	1.572674	3.455932	1.1343620	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	1.780196e-02	-1.472751e-03	 4.049703e-02	-1.306154e-02	6.831917e-01		 0	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173725	0.4664146	U	0.4686274	0.6162291
13773	129	182788	182789	1	 -19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.572674	3.455932	1.1343620	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.407165	3.121759	1.0520501	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	2.739300e-02	-5.363958e-03	-7.436535e-02	-2.724264e-01	1.314657e+00		 0	 2	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4468044	0.4236245	U	0.4686274	0.6162291
13773	129	182789	182790	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.407165	3.121759	1.0520501	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.371745	2.928486	0.9696957	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	 7.508473e-04	 2	1.254597e-03	 3.522641e-03	 7.306802e-02	 2.177347e-01	9.708748e-02		 2	 2	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4618072	0.5564194	0.6079718	U	0.4686274	0.6162291
13773	129	182790	182791	1	 417	Divergent	-	+	 0.000000	0	  0.000000	 -0.07232066	1.371745	2.928486	0.9696957	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	1.424476	3.225836	1.1062907	11	Uncharacterized conserved protein	S	conserved hypothetical protein	 9.573095e-03	 2	2.780560e-03	 2.143876e-03	 3.153430e-02	 1.138385e-01	2.227724e-01		 2	11	FALSE	 TRUE	 99	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6838149	0.5921126	0.5206651	0.5732362	U	0.4686274	0.5573725
13773	129	182791	182792	1	  75	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.424476	3.225836	1.1062907	11	Uncharacterized conserved protein	S	conserved hypothetical protein	1.314289	2.779749	0.9469888	1694	Predicted pyrophosphatase	R	hypothetical protein	 0.000000e+00	 0	1.214120e-02	 3.690417e-03	 1.097836e-01	 1.598325e-01	5.383032e-01		11	 0	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5345734	0.4854242	U	0.4686274	0.6162291
13773	129	182792	182793	1	  79	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.314289	2.779749	0.9469888	1694	Predicted pyrophosphatase	R	hypothetical protein	1.428753	2.994897	1.0735770	1716	FOG: FHA domain	T	hypothetical protein with conserved Forkhead-associated (FHA) domain	 0.000000e+00	 0	1.310193e-02	 3.104081e-03	 1.059674e-02	 1.207468e-01	6.032151e-01		 0	 0	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5221243	0.4767123	U	0.4686274	0.6162291
13773	129	182793	182794	1	  20	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.428753	2.994897	1.0735770	1716	FOG: FHA domain	T	hypothetical protein with conserved Forkhead-associated (FHA) domain	1.257718	2.850538	1.0465743	-	-	-	hypothetical protein	 0.000000e+00	 0	2.925296e-02	 4.384874e-03	 1.659624e-01	 1.306307e-01	7.243930e-01		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5243052	0.4624347	U	0.4686274	0.6162291
13773	129	182794	182795	1	 -14	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.257718	2.850538	1.0465743	-	-	-	hypothetical protein	1.304664	2.806678	0.9725268	1060	Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes	HR	conserved hypothetical protein	 0.000000e+00	 0	2.204001e-03	 2.841769e-02	 3.124217e-01	 9.181904e-01	2.565660e-03		 0	11	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8070764	0.6491703	U	0.4686274	0.6162291
13773	129	182795	182796	1	  67	Divergent	-	+	 9.112948	0	 11.703215	 10.34996264	1.304664	2.806678	0.9725268	1060	Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes	HR	conserved hypothetical protein	1.417315	3.009727	1.0459547	1060	Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes	HR	conserved hypothetical protein	 1.046714e-01	11	1.269011e-02	 5.000233e-03	 2.747726e-02	 2.256084e-01	4.781462e-01		11	22	FALSE	 TRUE	100	FALSE	2.6966212	1.8474056	0.5480306	2.7112802	0.7764261	1.0240303	0.5600448	0.4970610	U	0.4686274	0.8723904
13773	129	182796	182797	1	  50	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.417315	3.009727	1.0459547	1060	Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes	HR	conserved hypothetical protein	1.405502	3.173813	1.0920509	500	SAM-dependent methyltransferases	QR	hypothetical protein	 0.000000e+00	 0	1.395413e-04	 1.563876e-03	 4.142193e-02	 8.627296e-02	1.325237e-02		22	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176892	0.6413470	U	0.4686274	0.6162291
13773	129	182797	182798	1	 143	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405502	3.173813	1.0920509	500	SAM-dependent methyltransferases	QR	hypothetical protein	1.419142	3.113290	1.0236291	1427	Predicted periplasmic solute-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	1.860395e-04	 1.480039e-03	 3.533604e-02	 8.161695e-02	1.642646e-02		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177307	0.6394805	U	0.4686274	0.6162291
13773	129	182798	182799	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.419142	3.113290	1.0236291	1427	Predicted periplasmic solute-binding protein	R	conserved hypothetical protein	1.365321	2.997813	1.0577525	1131	ABC-type multidrug transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	 0.000000e+00	 0	2.896690e-03	 2.775936e-03	 6.936701e-02	 1.586704e-01	2.162999e-01		 0	 5	 TRUE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5340277	0.5752540	U	0.4686274	0.6162291
13773	129	182799	182800	1	  59	Same	-	-	 2.793208	0	  2.793208	  2.79320801	1.365321	2.997813	1.0577525	1131	ABC-type multidrug transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	1.387205	3.404527	1.1617673	1668	ABC-type Na+ efflux pump, permease component	CP	conserved hypothetical protein	 3.777386e-02	 1	4.789434e-04	 5.524749e-03	 7.698369e-02	 3.668587e-01	2.722627e-02		 5	 1	FALSE	 TRUE	102	 TRUE	2.9180123	1.7201207	0.5480306	2.9337967	0.6329203	0.7874252	0.6184155	0.6344003	U	0.4686274	0.8497495
13773	129	182800	182801	1	  30	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.387205	3.404527	1.1617673	1668	ABC-type Na+ efflux pump, permease component	CP	conserved hypothetical protein	1.402212	3.119285	1.0767721	2407	L-fucose isomerase and related proteins	G	conserved hypothetical protein	 1.851224e-04	 1	2.252037e-04	 3.156775e-03	 5.332715e-02	 2.089958e-01	1.783239e-02		 1	 1	FALSE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4421536	0.5534679	0.6388731	U	0.4686274	0.6162291
13773	129	182801	182802	1	  22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.402212	3.119285	1.0767721	2407	L-fucose isomerase and related proteins	G	conserved hypothetical protein	1.419928	3.045347	1.0387963	1052	Lactate dehydrogenase and related dehydrogenases	CHR	2-hydroxyacid dehydrogenase	 5.631536e-04	 1	3.138638e-04	 1.547439e-03	 3.520252e-02	 8.705632e-02	3.061829e-02		 1	 3	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.5177030	0.6326945	U	0.4686274	0.6162291
13773	129	182802	182803	1	  16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.419928	3.045347	1.0387963	1052	Lactate dehydrogenase and related dehydrogenases	CHR	2-hydroxyacid dehydrogenase	1.565059	3.314279	1.0318607	-	-	-	hypothetical protein	 0.000000e+00	 0	2.106284e-02	-3.576433e-03	 9.217251e-03	-1.746198e-01	1.026264e+00		 3	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4717083	0.4372640	U	0.4686274	0.6162291
13773	129	182803	182804	1	  49	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.565059	3.314279	1.0318607	-	-	-	hypothetical protein	1.377660	2.936415	1.0150841	-	-	-	hypothetical protein	 0.000000e+00	 0	3.511837e-02	-8.380931e-03	-9.625870e-02	-4.788354e-01	1.950985e+00		 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4086466	0.4088885	U	0.4686274	0.6162291
13773	129	182804	182805	1	  61	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.377660	2.936415	1.0150841	-	-	-	hypothetical protein	1.601342	3.553170	1.0856328	-	-	-	paREP2b	 0.000000e+00	 0	5.003381e-02	-1.105622e-02	-6.524041e-02	-5.233351e-01	2.162231e+00		 0	 0	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4021145	0.4066005	U	0.4686274	0.6162291
13773	129	182805	182806	1	  52	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.601342	3.553170	1.0856328	-	-	-	paREP2b	1.491157	3.216056	1.1141749	-	-	-	paREP2b	 0.000000e+00	 0	1.214081e-02	 5.962604e-03	 3.736912e-02	 3.876802e-01	1.755887e-01		 0	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6291125	0.5861247	U	0.4686274	0.6162291
13773	129	182806	182807	1	  83	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.491157	3.216056	1.1141749	-	-	-	paREP2b	1.493726	3.062904	1.0194836	-	-	-	paREP2a	 0.000000e+00	 0	6.600226e-06	 1.683341e-03	 4.095541e-02	 2.067170e-01	2.126270e-04		 0	 0	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5521176	0.6544230	U	0.4686274	0.6162291
13773	129	182807	182808	1	 -16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.493726	3.062904	1.0194836	-	-	-	paREP2a	1.484045	3.207988	1.0702653	98	Ribosomal protein S5	J	ribosomal protein S5	 0.000000e+00	 0	9.372800e-05	 1.382258e-03	 3.505587e-02	 1.850880e-01	3.769564e-03		 0	12	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5440228	0.6475210	U	0.4686274	0.6162291
13773	129	182808	182809	1	  -3	Same	+	+	27.817261	0	 40.873960	 40.87395955	1.484045	3.207988	1.0702653	98	Ribosomal protein S5	J	ribosomal protein S5	1.425823	3.177959	1.0860799	1841	Ribosomal protein L30/L7E	J	ribosomal protein L30	 4.432379e-01	12	3.389789e-03	-8.349091e-04	 9.928613e-03	-6.610284e-02	3.199235e-01	J	12	12	 TRUE	 TRUE	105	 TRUE	2.1902422	2.0205540	0.5480306	2.2661939	0.7776747	1.2514686	0.5021988	0.5350739	Y	1.4497162	0.9331582
13773	129	182809	182810	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	 -0.32267774	1.425823	3.177959	1.0860799	1841	Ribosomal protein L30/L7E	J	ribosomal protein L30	1.390654	2.992150	1.0346879	1085	Galactose-1-phosphate uridylyltransferase	C	galactose-1-phosphate uridylyltransferase	 6.983762e-03	11	1.236855e-03	 1.553097e-03	 4.660536e-02	 8.218533e-02	1.109406e-01	0	12	11	 TRUE	 TRUE	106	FALSE	0.4469764	0.2510360	0.5480306	0.4469764	0.7764261	0.5700986	0.5177147	0.6027125	N	0.5492530	0.5504758
13773	129	182810	182811	1	 -10	Same	-	-	15.458584	0	 42.294002	 41.63722285	1.390654	2.992150	1.0346879	1085	Galactose-1-phosphate uridylyltransferase	C	galactose-1-phosphate uridylyltransferase	1.466104	3.272252	1.1306714	153	Galactokinase	G	galactokinase	 7.598513e-02	11	5.692719e-03	-8.935391e-04	 1.470958e-03	-1.139127e-01	5.282155e-01	0	11	21	FALSE	 TRUE	105	 TRUE	2.5645024	2.0281612	0.5480306	2.2231598	0.7764261	0.9382478	0.4872188	0.4879284	N	0.5492530	0.9006378
13773	129	182811	182812	1	 -15	Same	-	-	 0.000000	0	  0.000000	 -0.05715841	1.466104	3.272252	1.1306714	153	Galactokinase	G	galactokinase	1.413562	3.345486	1.1513305	1994	Zn-dependent proteases	R	conserved hypothetical protein	 3.280771e-03	 6	2.760645e-03	-5.565326e-04	 1.731541e-02	-6.336284e-02	2.557891e-01		21	 6	FALSE	 TRUE	104	 TRUE	0.4469764	0.3074832	0.5480306	0.4469764	0.7537284	0.5207449	0.5028700	0.5602596	U	0.4686274	0.5594987
13773	129	182812	182813	1	 134	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413562	3.345486	1.1513305	1994	Zn-dependent proteases	R	conserved hypothetical protein	1.601691	3.475305	1.1220411	-	-	-	hypothetical protein	 0.000000e+00	 0	3.539229e-02	-5.685868e-03	 7.988441e-03	-2.402685e-01	1.309382e+00		 6	 0	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4537766	0.4239342	U	0.4686274	0.6162291
13773	129	182813	182814	1	  96	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.601691	3.475305	1.1220411	-	-	-	hypothetical protein	1.377923	2.979093	1.0568863	1506	Dipeptidyl aminopeptidases/acylaminoacyl-peptidases	E	acylamino-acid-releasing enzyme, conjectural	 0.000000e+00	 0	5.007199e-02	-1.104237e-02	-1.520309e-01	-5.204708e-01	2.153213e+00		 0	 6	FALSE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4025696	0.4066719	U	0.4686274	0.6162291
13773	129	182814	182815	1	  59	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.377923	2.979093	1.0568863	1506	Dipeptidyl aminopeptidases/acylaminoacyl-peptidases	E	acylamino-acid-releasing enzyme, conjectural	1.486488	3.046647	1.0083925	-	-	-	paREP2b	 0.000000e+00	 0	1.178646e-02	-2.578461e-03	-1.999040e-02	-2.524053e-01	1.041872e+00		 6	 0	 TRUE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4515071	0.4362530	U	0.4686274	0.6162291
13773	129	182815	182816	1	 129	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.486488	3.046647	1.0083925	-	-	-	paREP2b	1.451080	3.032765	1.1478676	-	-	-	hypothetical protein	 0.000000e+00	 0	1.253779e-03	-1.099627e-05	 1.748148e-02	 3.905504e-02	1.073908e-01		 0	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181603	0.6039545	U	0.4686274	0.6162291
13773	129	182816	182817	1	  16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.451080	3.032765	1.1478676	-	-	-	hypothetical protein	1.384275	3.002852	1.0065992	-	-	-	hypothetical protein	 0.000000e+00	 0	4.462800e-03	 2.102960e-05	 3.242321e-02	-5.145573e-02	4.185683e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5064909	0.5090246	U	0.4686274	0.6162291
13773	129	182817	182818	1	 -14	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.384275	3.002852	1.0065992	-	-	-	hypothetical protein	1.582620	3.488935	1.1201260	-	-	-	hypothetical protein	 0.000000e+00	 0	3.934049e-02	-8.807620e-03	-4.995177e-02	-4.618258e-01	1.925343e+00		 0	 0	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4102004	0.4093718	U	0.4686274	0.6162291
13773	129	182818	182819	1	 244	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.582620	3.488935	1.1201260	-	-	-	hypothetical protein	1.499079	3.707818	1.1788590	-	-	-	hypothetical protein	 0.000000e+00	 0	6.979014e-03	 6.257730e-03	 5.594806e-02	 4.183297e-01	1.099205e-01		 0	 0	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6428337	0.6030494	U	0.4686274	0.6162291
13773	129	182819	182820	1	 123	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.499079	3.707818	1.1788590	-	-	-	hypothetical protein	1.501093	3.327202	0.9703552	1131	ABC-type multidrug transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	 0.000000e+00	 0	4.054951e-06	 2.370014e-03	 4.894657e-02	 2.577004e-01	1.325237e-04		 0	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5727043	0.6548417	U	0.4686274	0.6162291
13773	129	182820	182821	1	 277	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.501093	3.327202	0.9703552	1131	ABC-type multidrug transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	1.686433	3.946479	1.1374778	-	-	-	hypothetical protein	 0.000000e+00	 0	3.435095e-02	 1.168151e-02	 2.913406e-01	 4.945168e-01	2.022583e-01		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6710886	0.5792906	U	0.4686274	0.6162291
13773	129	182821	182822	1	 152	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.686433	3.946479	1.1374778	-	-	-	hypothetical protein	1.452005	2.922482	0.9963554	-	-	-	paREP2a	 0.000000e+00	 0	5.495629e-02	 1.439755e-04	-1.178702e-01	 9.831200e-02	7.414756e-01		 0	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184167	0.4605849	U	0.4686274	0.6162291
13773	129	182822	182823	1	 108	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.452005	2.922482	0.9963554	-	-	-	paREP2a	1.459606	3.141127	1.0533924	421	Spermidine synthase	E	spermidine synthase	 0.000000e+00	 0	5.776959e-05	 5.031047e-06	 2.096687e-02	 1.833068e-02	6.008332e-03		 0	20	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177706	0.6454790	U	0.4686274	0.6162291
13773	129	182823	182824	1	  -7	Same	+	+	 0.000000	0	  0.000000	 -3.52911976	1.459606	3.141127	1.0533924	421	Spermidine synthase	E	spermidine synthase	1.406568	3.152744	1.1108221	452	Phosphopantothenoylcysteine synthetase/decarboxylase	H	pantothenate metabolism flavoprotein (dfp)	 3.533918e-02	20	2.813014e-03	-3.681535e-04	 2.136434e-02	-6.202111e-02	2.755646e-01	0	20	53	 TRUE	 TRUE	100	 TRUE	0.4469764	0.1869980	0.5480306	0.4469764	0.7777535	0.7743315	0.5032581	0.5521597	N	0.5492530	0.5302134
13773	129	182824	182825	1	 -44	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.406568	3.152744	1.1108221	452	Phosphopantothenoylcysteine synthetase/decarboxylase	H	pantothenate metabolism flavoprotein (dfp)	1.403235	3.185696	1.0495781	2522	Predicted transcriptional regulator	R	hypothetical protein	 0.000000e+00	 0	1.110871e-05	 2.158650e-03	 4.676425e-02	 1.325237e-01	1.472486e-03		53	 0	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5250308	0.6510547	U	0.4686274	0.6162291
13773	129	182825	182826	1	 420	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.403235	3.185696	1.0495781	2522	Predicted transcriptional regulator	R	hypothetical protein	1.357923	2.861993	1.0017964	-	-	-	hypothetical protein	 0.000000e+00	 0	2.053184e-03	 4.501281e-03	 8.966505e-02	 2.809503e-01	1.214012e-01		 0	 0	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5847398	0.6004968	U	0.4686274	0.6162291
13773	129	182826	182827	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.357923	2.861993	1.0017964	-	-	-	hypothetical protein	1.390064	2.960891	1.0337706	1640	4-alpha-glucanotransferase	G	4-alpha-glucanotransferase (malQ)	 0.000000e+00	 0	1.033037e-03	 5.732389e-03	 7.512741e-02	 3.680449e-01	5.265669e-02		 0	14	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6189808	0.6230318	U	0.4686274	0.6162291
13773	129	182827	182828	1	 127	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.390064	2.960891	1.0337706	1640	4-alpha-glucanotransferase	G	4-alpha-glucanotransferase (malQ)	1.337847	2.824243	0.9652678	-	-	-	paREP2a	 0.000000e+00	 0	2.726652e-03	 6.963655e-03	 1.253482e-01	 4.247563e-01	1.171604e-01		14	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6456766	0.6014840	U	0.4686274	0.6162291
13773	129	182828	182829	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.337847	2.824243	0.9652678	-	-	-	paREP2a	1.430078	2.895921	0.9853456	-	-	-	paREP2a	 0.000000e+00	 0	8.506528e-03	 2.420276e-03	 1.744883e-02	 9.694818e-02	5.332474e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182720	0.4866369	U	0.4686274	0.6162291
13773	129	182829	182830	1	 158	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.430078	2.895921	0.9853456	-	-	-	paREP2a	1.452624	3.138590	1.0325003	-	-	-	paREP2b	 0.000000e+00	 0	5.083390e-04	-2.623983e-05	 1.928092e-02	-1.276793e-02	5.108363e-02		 0	 0	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175012	0.6235106	U	0.4686274	0.6162291
13773	129	182830	182831	1	  44	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.452624	3.138590	1.0325003	-	-	-	paREP2b	1.475963	3.167777	1.0968401	-	-	-	paREP2b	 0.000000e+00	 0	5.446925e-04	 3.024601e-05	 2.262051e-02	 3.655299e-02	4.717197e-02		 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177838	0.6250684	U	0.4686274	0.6162291
13773	129	182831	182832	1	  33	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.475963	3.167777	1.0968401	-	-	-	paREP2b	1.580579	3.370731	1.1207539	164	Ribonuclease HII	L	ribonuclease HII (rnhB)	 0.000000e+00	 0	1.094456e-02	 3.174057e-03	 9.869853e-02	 2.720047e-01	2.496164e-01		 0	24	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5811452	0.5628925	U	0.4686274	0.6162291
13773	129	182832	182833	1	 196	Same	-	-	 0.000000	0	  0.000000	 -0.05715841	1.580579	3.370731	1.1207539	164	Ribonuclease HII	L	ribonuclease HII (rnhB)	1.343516	3.027064	1.0518192	1695	Predicted transcriptional regulators	K	conserved hypothetical protein	 1.541017e-02	 1	5.619894e-02	-1.393622e-02	-1.550369e-01	-6.761986e-01	2.704927e+00	0	24	 1	FALSE	 TRUE	101	 TRUE	0.4469764	0.3074832	0.5480306	0.4469764	0.6329203	0.6399605	0.3891275	0.4024166	N	0.5492530	0.5682007
13773	129	182833	182834	1	  -7	Same	-	-	 0.000000	0	  0.000000	 -0.05715841	1.343516	3.027064	1.0518192	1695	Predicted transcriptional regulators	K	conserved hypothetical protein	1.475173	3.261157	1.1012299	171	NAD synthase	H	NH(3)-dependent NAD(+) synthetase	 1.793207e-02	 1	1.733367e-02	-2.565339e-03	-3.737441e-02	-2.607031e-01	1.290133e+00	0	 1	20	FALSE	 TRUE	100	 TRUE	0.4469764	0.3074832	0.5480306	0.4469764	0.6329203	0.6618908	0.4498531	0.4244553	N	0.5492530	0.5682007
13773	129	182834	182835	1	  20	Same	-	-	 0.000000	0	  0.000000	 -1.76552940	1.475173	3.261157	1.1012299	171	NAD synthase	H	NH(3)-dependent NAD(+) synthetase	1.338908	2.943581	1.0263930	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acetyltransferase	 6.100492e-03	20	1.856827e-02	-2.674919e-03	 2.015793e-02	-2.678087e-01	1.341188e+00	0	20	40	FALSE	 TRUE	 99	 TRUE	0.4469764	0.1990928	0.5480306	0.4469764	0.7777535	0.5576421	0.4476607	0.4226076	N	0.5492530	0.5340501
13773	129	182835	182836	1	  44	Same	-	-	 0.000000	0	  0.000000	 -0.21333955	1.338908	2.943581	1.0263930	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acetyltransferase	1.384633	3.028202	1.0584629	3839	ABC-type sugar transport systems, ATPase components	G	ABC transporter ATP-binding protein, putative	 7.675236e-03	 6	2.090774e-03	 7.509545e-03	 8.772758e-02	 4.615837e-01	8.326967e-02	0	40	 6	FALSE	 TRUE	 98	 TRUE	0.4469764	0.2707622	0.5480306	0.4469764	0.7537284	0.5752379	0.6604111	0.6130924	N	0.5492530	0.5566869
13773	129	182836	182837	1	  57	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.384633	3.028202	1.0584629	3839	ABC-type sugar transport systems, ATPase components	G	ABC transporter ATP-binding protein, putative	1.414242	3.107038	1.0880720	-	-	-	hypothetical protein	 0.000000e+00	 0	8.767104e-04	 2.480208e-03	 4.192358e-02	 1.473858e-01	7.976398e-02		 6	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5300028	0.6145887	U	0.4686274	0.6162291
13773	129	182837	182838	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.414242	3.107038	1.0880720	-	-	-	hypothetical protein	1.484955	3.264946	1.0781863	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	 0.000000e+00	 0	5.000297e-03	-1.246854e-03	 5.514600e-03	-1.095630e-01	4.581929e-01		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4882674	0.5025415	U	0.4686274	0.6162291
13773	129	182838	182839	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.484955	3.264946	1.0781863	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	1.427781	3.156202	1.0978912	1502	Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes	I	DNA endonuclease, conjectural	 0.000000e+00	 0	3.268833e-03	-7.924579e-04	 1.002739e-02	-5.744993e-02	3.019515e-01		 0	 1	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5047650	0.5408188	U	0.4686274	0.6162291
13773	129	182839	182840	1	  16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.427781	3.156202	1.0978912	1502	Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes	I	DNA endonuclease, conjectural	1.390972	3.188911	1.1032540	1846	Transcriptional regulators	K	conserved hypothetical protein	 0.000000e+00	 0	1.354930e-03	 1.426661e-03	 4.527384e-02	 6.962974e-02	1.262621e-01	0	 1	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181001	0.5992342	N	0.5492530	0.6245624
13773	129	182840	182841	1	 393	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.390972	3.188911	1.1032540	1846	Transcriptional regulators	K	conserved hypothetical protein	1.493025	3.245094	1.1139339	274	Deoxyribose-phosphate aldolase	F	deoxyribose-phosphate aldolase	 0.000000e+00	 0	1.041494e-02	-2.515480e-03	-1.354346e-02	-2.267723e-01	9.085616e-01	0	 0	40	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4580089	0.4456325	N	0.5492530	0.6245624
13773	129	182841	182842	1	  56	Divergent	-	+	 0.000000	0	  0.000000	 -1.39475454	1.493025	3.245094	1.1139339	274	Deoxyribose-phosphate aldolase	F	deoxyribose-phosphate aldolase	1.481928	2.974131	1.0259355	1254	Acylphosphatases	C	acylphosphatase, putative	 1.223137e-03	20	1.231515e-04	 1.271244e-03	 3.356762e-02	 1.741162e-01	5.889944e-03	0	40	20	FALSE	 TRUE	100	FALSE	0.4469764	0.2033220	0.5480306	0.4469764	0.7777535	0.4781126	0.5397540	0.6456836	N	0.5492530	0.5353907
13773	129	182842	182843	1	  87	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.481928	2.974131	1.0259355	1254	Acylphosphatases	C	acylphosphatase, putative	1.402811	2.888818	0.9919772	4353	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	6.259526e-03	-1.483456e-03	 7.018717e-03	-1.484077e-01	5.937158e-01		20	 0	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4772818	0.4775886	U	0.4686274	0.6162291
13773	129	182843	182844	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.402811	2.888818	0.9919772	4353	Uncharacterized conserved protein	S	conserved hypothetical protein	1.396851	3.178993	1.0752143	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.552245e-05	 2.649781e-03	 5.328052e-02	 1.762342e-01	3.864392e-03		 0	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5407656	0.6474175	U	0.4686274	0.6162291
13773	129	182844	182845	1	  51	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.396851	3.178993	1.0752143	-	-	-	conserved within P. aerophilum	1.349679	3.598118	1.1970994	-	-	-	hypothetical protein	 0.000000e+00	 0	2.225133e-03	 5.547686e-03	 1.043210e-01	 3.521215e-01	1.068883e-01		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6136673	0.6041306	U	0.4686274	0.6162291
13773	129	182845	182846	1	  49	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.349679	3.598118	1.1970994	-	-	-	hypothetical protein	1.312713	2.839039	1.0713307	-	-	-	hypothetical protein	 0.000000e+00	 0	1.366470e-03	 1.410557e-02	 2.082309e-01	 7.114169e-01	1.803795e-02		 0	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7581074	0.6386975	U	0.4686274	0.6162291
13773	129	182846	182847	1	 150	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.312713	2.839039	1.0713307	-	-	-	hypothetical protein	1.398479	3.032677	1.0728404	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	 0.000000e+00	 0	7.355730e-03	 7.338052e-03	 6.480681e-02	 3.974122e-01	2.286058e-01		 0	 9	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6329939	0.5712214	U	0.4686274	0.6162291
13773	129	182847	182848	1	   1	Convergent	+	-	 0.000000	0	  0.000000	 -0.05918887	1.398479	3.032677	1.0728404	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	1.353485	2.840380	0.9390975	4911	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.200565e-02	 2	2.024427e-03	 5.180655e-03	 9.854445e-02	 3.292844e-01	1.034044e-01		 9	 2	 TRUE	 TRUE	100	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6838149	0.6157324	0.6034118	0.6048471	U	0.4686274	0.5589164
13773	129	182848	182849	1	   1	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.353485	2.840380	0.9390975	4911	Uncharacterized conserved protein	S	conserved hypothetical protein	1.474496	3.085388	0.9937239	-	-	-	hypothetical protein	 0.000000e+00	 0	1.464346e-02	-2.261928e-03	-2.869737e-02	-2.346224e-01	1.137996e+00		 2	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4555234	0.4312543	U	0.4686274	0.6162291
13773	129	182849	182850	1	  16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.474496	3.085388	0.9937239	-	-	-	hypothetical protein	1.443715	3.311255	1.1535380	1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	J	translation initiation factor aIF-2B subunit, conjectural	 0.000000e+00	 0	9.474208e-04	-1.773707e-04	 1.745808e-02	 7.138612e-03	8.238618e-02		 0	 1	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192124	0.6134641	U	0.4686274	0.6162291
13773	129	182850	182851	1	 110	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.443715	3.311255	1.1535380	1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	J	translation initiation factor aIF-2B subunit, conjectural	1.439033	3.191393	1.0813904	1121	ABC-type Mn/Zn transport systems, ATPase component	P	manganese ABC transporter ATP-binding protein	 1.599790e-02	 1	2.192484e-05	 9.489272e-05	 2.208547e-02	-5.477648e-04	2.191648e-03	0	 1	23	FALSE	 TRUE	 97	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.6457313	0.5199850	0.6499017	N	0.5492530	0.5604716
13773	129	182851	182852	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.439033	3.191393	1.0813904	1121	ABC-type Mn/Zn transport systems, ATPase component	P	manganese ABC transporter ATP-binding protein	1.420349	3.611848	1.2522089	1108	ABC-type Mn2+/Zn2+ transport systems, permease components	P	manganese transport permease protein	 0.000000e+00	 0	3.491052e-04	 3.837030e-04	 2.728354e-02	 5.167248e-03	3.740350e-02	P	23	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5194599	0.6288792	Y	1.4497162	0.7118045
13773	129	182852	182853	1	 279	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.420349	3.611848	1.2522089	1108	ABC-type Mn2+/Zn2+ transport systems, permease components	P	manganese transport permease protein	1.333520	3.039993	1.0566649	1196	Chromosome segregation ATPases	D	hypothetical protein	 0.000000e+00	 0	7.539160e-03	 3.659264e-03	 9.635919e-02	 1.870210e-01	4.146055e-01	0	 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5447810	0.5098051	N	0.5492530	0.6245624
13773	129	182853	182854	1	 170	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.333520	3.039993	1.0566649	1196	Chromosome segregation ATPases	D	hypothetical protein	1.433360	3.095911	1.0620565	535	Predicted Fe-S oxidoreductases	R	conserved hypothetical protein	 0.000000e+00	 0	9.968000e-03	 2.125561e-03	 1.113234e-02	 6.278091e-02	6.212295e-01		 0	 4	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183843	0.4744725	U	0.4686274	0.6162291
13773	129	182854	182855	1	 409	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.433360	3.095911	1.0620565	535	Predicted Fe-S oxidoreductases	R	conserved hypothetical protein	1.466817	3.198333	1.0631201	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein, degenerate	 0.000000e+00	 0	1.119361e-03	-2.781392e-04	 1.726398e-02	-1.745779e-02	9.756633e-02		 4	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5161167	0.6075710	U	0.4686274	0.6162291
13773	129	182855	182856	1	 295	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.466817	3.198333	1.0631201	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein, degenerate	1.459377	3.412024	1.1278763	4904	Uncharacterized protein conserved in archaea	S	hypothetical protein	 0.000000e+00	 0	5.535143e-05	 1.231511e-04	 2.173534e-02	 4.171494e-02	4.255485e-03		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183620	0.6470653	U	0.4686274	0.6162291
13773	129	182856	182857	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.459377	3.412024	1.1278763	4904	Uncharacterized protein conserved in archaea	S	hypothetical protein	1.559105	3.529696	1.0060428	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	9.945700e-03	 8.600082e-04	 6.009456e-02	 1.346376e-01	3.583442e-01		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5264544	0.5224252	U	0.4686274	0.6162291
13773	129	182857	182858	1	  75	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.559105	3.529696	1.0060428	-	-	-	conserved hypothetical protein	1.502113	3.201764	1.0095846	437	Fe-S-cluster-containing hydrogenase components 1	C	molybdopterin oxidoreductase, iron-sulfur binding subunit	 0.000000e+00	 0	3.248171e-03	 5.463142e-03	 6.168383e-02	 4.009473e-01	6.453082e-02		 0	13	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6363299	0.6192498	U	0.4686274	0.6162291
13773	129	182858	182859	1	  -3	Same	+	+	 4.276666	0	  4.276666	  4.27666612	1.502113	3.201764	1.0095846	437	Fe-S-cluster-containing hydrogenase components 1	C	molybdopterin oxidoreductase, iron-sulfur binding subunit	1.474926	3.568496	1.1748748	4881	Predicted membrane protein	S	conserved hypothetical protein	 4.882923e-02	 2	7.391297e-04	 1.193574e-03	 2.956680e-02	 1.636438e-01	4.136213e-02		13	 2	 TRUE	 TRUE	105	 TRUE	2.8554574	1.7490992	0.5480306	2.9038657	0.6838149	0.8388236	0.5358104	0.6275054	U	0.4686274	0.8553650
13773	129	182859	182860	1	  -7	Same	+	+	 4.276666	0	  4.276666	  4.27666612	1.474926	3.568496	1.1748748	4881	Predicted membrane protein	S	conserved hypothetical protein	1.474340	3.094147	1.0730744	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit	 1.242508e-01	 2	3.432845e-07	 5.400028e-04	 2.698240e-02	 9.683068e-02	7.126832e-05		 2	 2	 TRUE	 TRUE	106	 TRUE	2.8554574	1.7490992	0.5480306	2.9038657	0.6838149	1.0601895	0.5182452	0.6552829	U	0.4686274	0.8553650
13773	129	182860	182861	1	  50	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.474340	3.094147	1.0730744	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit	1.378926	3.395241	1.1641569	1280	Putative threonine efflux protein	E	conserved hypothetical protein	 3.137307e-03	 2	9.103849e-03	-1.662895e-03	 1.329369e-02	-1.811747e-01	8.048968e-01	0	 2	 8	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5183257	0.4698265	0.4547804	N	0.5492530	0.6245624
13773	129	182861	182862	1	  69	Convergent	+	-	 0.000000	0	  0.000000	 -0.14642863	1.378926	3.395241	1.1641569	1280	Putative threonine efflux protein	E	conserved hypothetical protein	1.401648	3.145457	1.0955937	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	-1.607957e-02	 8	5.163226e-04	 3.604847e-03	 5.583439e-02	 2.368859e-01	3.564359e-02		 8	15	 TRUE	 TRUE	108	FALSE	0.4469764	0.2777460	0.5480306	0.4469764	0.7652913	0.5247196	0.5636548	0.6297015	U	0.4686274	0.5501407
13773	129	182862	182863	1	 243	Divergent	-	+	 0.000000	0	  0.000000	 -0.53301223	1.401648	3.145457	1.0955937	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	1.455075	3.257397	1.1345188	1602	Uncharacterized conserved protein	S	conserved hypothetical protein	 7.346311e-02	 9	2.854446e-03	-1.831846e-04	 1.234623e-02	-5.298358e-02	2.844990e-01		15	 9	FALSE	 TRUE	107	FALSE	0.4469764	0.2331824	0.5480306	0.4469764	0.7702221	0.9331460	0.5059243	0.5488286	U	0.4686274	0.5360523
13773	129	182863	182864	1	   6	Convergent	+	-	 0.000000	0	  0.000000	 -0.13715041	1.455075	3.257397	1.1345188	1602	Uncharacterized conserved protein	S	conserved hypothetical protein	1.511184	3.444027	1.1142023	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein	 5.982711e-02	 2	3.148197e-03	 2.201820e-04	 3.235643e-02	 7.516982e-02	1.913643e-01		 9	 2	 TRUE	 TRUE	108	FALSE	0.4469764	0.2786603	0.5480306	0.4469764	0.6838149	0.8821744	0.5178681	0.5826327	U	0.4686274	0.5504290
13773	129	182864	182865	1	 316	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511184	3.444027	1.1142023	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein	1.483721	3.206512	1.0963511	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	7.542289e-04	 1.932938e-03	 3.691345e-02	 2.259465e-01	2.981784e-02		 2	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5602307	0.6331508	U	0.4686274	0.6162291
13773	129	182865	182866	1	 454	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.483721	3.206512	1.0963511	-	-	-	P. aerophilum family 1964 protein	1.559834	3.415216	1.1339858	380	Trehalose-6-phosphate synthase	G	trehalose-6-phosphate synthase	 0.000000e+00	 0	5.793262e-03	 3.505707e-03	 8.893689e-02	 3.081642e-01	1.443184e-01		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5951373	0.5943153	U	0.4686274	0.6162291
13773	129	182866	182867	1	  -9	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.559834	3.415216	1.1339858	380	Trehalose-6-phosphate synthase	G	trehalose-6-phosphate synthase	1.554615	3.416736	1.1282744	438	Glycosyltransferase	M	glycosyl transferase, conjectural	 0.000000e+00	 0	2.724588e-05	 1.119353e-02	 1.488099e-01	 5.906978e-01	2.597465e-04	0	 0	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7164421	0.6541658	N	0.5492530	0.6245624
13773	129	182867	182868	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.554615	3.416736	1.1282744	438	Glycosyltransferase	M	glycosyl transferase, conjectural	1.708339	3.923443	1.0941710	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.363110e-02	 2.652242e-02	 4.714489e-01	 7.383722e-01	4.421934e-02		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7648766	0.6262469	U	0.4686274	0.6162291
13773	129	182868	182869	1	 331	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.708339	3.923443	1.0941710	-	-	-	conserved within P. aerophilum	1.590809	3.450597	1.0931708	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.381316e-02	 3.582250e-02	 3.212834e-01	 8.262914e-01	1.433377e-02		 0	 2	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7903601	0.6407068	U	0.4686274	0.6162291
13773	129	182869	182870	1	  -3	Same	+	+	 2.856470	0	  5.519058	  5.51905803	1.590809	3.450597	1.0931708	-	-	-	conserved hypothetical protein	1.543334	3.287048	1.0703486	438	Glycosyltransferase	M	trehalose synthase	 8.678342e-02	 2	2.253880e-03	 1.281816e-02	 1.427179e-01	 6.166159e-01	1.603537e-02		 2	 4	 TRUE	 TRUE	106	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.6838149	0.9642105	0.7255524	0.6397376	U	0.4686274	0.8613043
13773	129	182870	182871	1	 897	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.543334	3.287048	1.0703486	438	Glycosyltransferase	M	trehalose synthase	1.493534	3.218844	1.0895765	561	Predicted hydrolases of the HAD superfamily	R	hypothetical protein	 0.000000e+00	 0	2.480070e-03	 3.874522e-03	 4.908248e-02	 3.330504e-01	7.010506e-02		 4	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6049993	0.6177812	U	0.4686274	0.6162291
13773	129	182871	182872	1	  13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.493534	3.218844	1.0895765	561	Predicted hydrolases of the HAD superfamily	R	hypothetical protein	1.449813	3.230616	1.0966563	247	Fe-S oxidoreductase	C	conserved hypothetical protein	 0.000000e+00	 0	1.911502e-03	-6.656435e-05	 1.545588e-02	 3.775042e-02	1.425743e-01		 0	 1	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179044	0.5949759	U	0.4686274	0.6162291
13773	129	182872	182873	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.449813	3.230616	1.0966563	247	Fe-S oxidoreductase	C	conserved hypothetical protein	1.411396	3.019494	0.9870938	247	Fe-S oxidoreductase	C	glycolate oxidase subunit, putative	 1.851224e-04	 1	1.475868e-03	 6.317686e-05	 2.553256e-02	-2.464176e-02	1.460730e-01	C	 1	 1	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4421536	0.5140658	0.5939828	Y	1.4497162	0.7118045
13773	129	182873	182874	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.411396	3.019494	0.9870938	247	Fe-S oxidoreductase	C	glycolate oxidase subunit, putative	1.422079	3.138954	1.0967730	247	Fe-S oxidoreductase	C	glycolate oxidase subunit glcF	 4.292035e-03	 1	1.141179e-04	 1.172460e-03	 3.256612e-02	 6.125895e-02	9.203038e-03	C	 1	20	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5388554	0.5184584	0.6433585	Y	1.4497162	0.7118045
13773	129	182874	182875	1	  -3	Same	-	-	 2.856470	0	  2.856470	  2.85647021	1.422079	3.138954	1.0967730	247	Fe-S oxidoreductase	C	glycolate oxidase subunit glcF	1.401111	3.106620	1.0161523	277	FAD/FMN-containing dehydrogenases	C	glycolate oxidase subunit glcE	 3.305270e-03	 2	4.396421e-04	 1.473956e-03	 4.220986e-02	 8.334978e-02	4.167489e-02	C	20	 2	FALSE	 TRUE	109	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6838149	0.5221400	0.5176893	0.6273196	Y	1.4497162	0.8983990
13773	129	182875	182876	1	  -3	Same	-	-	 5.629059	0	  5.629059	  5.62905893	1.401111	3.106620	1.0161523	277	FAD/FMN-containing dehydrogenases	C	glycolate oxidase subunit glcE	1.361342	2.931105	1.0323028	277	FAD/FMN-containing dehydrogenases	C	glycolate oxidase subunit glcD	 1.836843e-02	 2	1.581559e-03	 4.527885e-03	 8.785159e-02	 2.920376e-01	9.423910e-02	C	 2	38	FALSE	 TRUE	108	 TRUE	2.7915509	1.7992260	0.5480306	2.8430153	0.6838149	0.6646445	0.5901232	0.6091015	Y	1.4497162	0.9071815
13773	129	182876	182877	1	  57	Divergent	-	+	 0.000000	0	  0.000000	 -0.05918887	1.361342	2.931105	1.0323028	277	FAD/FMN-containing dehydrogenases	C	glycolate oxidase subunit glcD	1.356614	2.920369	1.0402020	2225	Malate synthase	C	malate synthase (glcB)	 9.094140e-03	 1	2.235989e-05	 8.534901e-03	 1.227496e-01	 5.302787e-01	6.808775e-04	C	38	 1	FALSE	 TRUE	107	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.5875828	0.6885450	0.6526075	Y	1.4497162	0.6609110
13773	129	182877	182878	1	  30	Same	+	+	 0.000000	0	  0.000000	 -0.05918887	1.356614	2.920369	1.0402020	2225	Malate synthase	C	malate synthase (glcB)	1.431606	3.225571	1.0906848	247	Fe-S oxidoreductase	C	conserved hypothetical protein	 4.118834e-02	 1	5.623888e-03	 1.875346e-03	 2.084640e-02	 7.112107e-02	4.165846e-01	C	 1	 4	 TRUE	 TRUE	108	 TRUE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.8108260	0.5180499	0.5093800	Y	1.4497162	0.6609110
13773	129	182878	182879	1	  -3	Same	+	+	 5.495528	0	 10.748383	 10.74838253	1.431606	3.225571	1.0906848	247	Fe-S oxidoreductase	C	conserved hypothetical protein	1.533988	3.230891	1.1061735	1139	Uncharacterized conserved protein containing a ferredoxin-like domain	C	conserved hypothetical protein	 5.812567e-02	 4	1.048190e-02	-1.634259e-03	 1.795946e-02	-6.655637e-02	6.236514e-01	C	 4	10	 TRUE	 TRUE	109	 TRUE	2.7996416	1.8534968	0.5480306	2.7445446	0.7323301	0.8774089	0.5019985	0.4741862	Y	1.4497162	0.9127625
13773	129	182879	182880	1	   4	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.533988	3.230891	1.1061735	1139	Uncharacterized conserved protein containing a ferredoxin-like domain	C	conserved hypothetical protein	1.679688	3.979781	1.1341565	530	Ca2+/Na+ antiporter	P	conserved within P. aerophilum part 2, authentic frameshift	 0.000000e+00	 0	2.122858e-02	 1.885594e-02	 3.562381e-01	 6.639663e-01	6.929460e-02	0	10	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7404670	0.6180080	N	0.5492530	0.6245624
13773	129	182880	182881	1	  76	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.679688	3.979781	1.1341565	530	Ca2+/Na+ antiporter	P	conserved within P. aerophilum part 2, authentic frameshift	1.629435	4.022992	1.1861902	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	 0.000000e+00	 0	2.525331e-03	 4.064615e-02	 4.441283e-01	 8.681507e-01	2.488501e-03		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7984338	0.6493745	U	0.4686274	0.6162291
13773	129	182881	182882	1	 201	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.629435	4.022992	1.1861902	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	1.642961	3.834153	1.1587509	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.829471e-04	 3.410722e-02	 4.322245e-01	 8.389106e-01	3.115780e-04		 0	 1	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7922519	0.6539188	U	0.4686274	0.6162291
13773	129	182882	182883	1	   2	Convergent	+	-	 0.000000	0	  0.000000	 -0.13353139	1.642961	3.834153	1.1587509	-	-	-	conserved hypothetical protein	1.430960	3.076855	1.0554650	1853	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	R	conserved hypothetical protein	 7.158483e-02	 1	4.494429e-02	-3.914235e-03	-1.171642e-01	-9.723414e-02	1.060758e+00		 1	 1	 TRUE	 TRUE	109	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.9205230	0.4929396	0.4353079	U	0.4686274	0.5517368
13773	129	182883	182884	1	  27	Same	-	-	 0.000000	0	  0.000000	 -0.13353139	1.430960	3.076855	1.0554650	1853	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	R	conserved hypothetical protein	1.399543	3.141057	1.1132168	4608	ABC-type oligopeptide transport system, ATPase component	E	dipeptide transport ATP-binding protein	 8.738481e-03	 1	9.870296e-04	 1.059423e-03	 3.889172e-02	 4.478419e-02	1.029115e-01		 1	39	FALSE	 TRUE	108	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.5857888	0.5185372	0.6052131	U	0.4686274	0.5517368
13773	129	182884	182885	1	  -3	Same	-	-	41.985143	0	 85.843905	 82.21114082	1.399543	3.141057	1.1132168	4608	ABC-type oligopeptide transport system, ATPase component	E	dipeptide transport ATP-binding protein	1.431131	3.096743	1.0554192	444	ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component	EP	dipeptide transport ATP-binding protein	 2.472563e-01	39	9.977809e-04	 1.050575e-03	 2.723672e-02	 4.314973e-02	1.053882e-01		39	48	FALSE	 TRUE	107	 TRUE	2.0858754	2.0698338	0.5480306	2.0720159	0.7736367	1.1850303	0.5184263	0.6043969	U	0.4686274	0.9073233
13773	129	182885	182886	1	  -3	Same	-	-	22.160864	0	 38.838210	 34.27766989	1.431131	3.096743	1.0554192	444	ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component	EP	dipeptide transport ATP-binding protein	1.629159	3.790344	1.1728653	1173	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide ABC transporter, permease protein	 9.526239e-02	25	3.921530e-02	-3.601900e-03	 5.783158e-02	-9.181952e-02	1.015408e+00		48	25	FALSE	 TRUE	106	 TRUE	2.2944843	1.9978612	0.5480306	2.2928225	0.7766777	0.9945586	0.4947389	0.4382819	U	0.4686274	0.8969529
13773	129	182886	182887	1	   2	Same	-	-	15.901920	0	 23.012616	 20.92360490	1.629159	3.790344	1.1728653	1173	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide ABC transporter, permease protein	1.608239	3.754390	1.0941066	601	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide ABC transporter, permease protein	 3.885395e-02	25	4.376508e-04	 2.788206e-02	 3.289656e-01	 7.971603e-01	7.215181e-04		25	36	FALSE	 TRUE	105	 TRUE	2.5308252	1.9256982	0.5480306	2.5449863	0.7766777	0.7965433	0.7842467	0.6523872	U	0.4686274	0.8851948
13773	129	182887	182888	1	   7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.608239	3.754390	1.0941066	601	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide ABC transporter, permease protein	1.619210	3.519007	1.0644511	747	ABC-type dipeptide transport system, periplasmic component	E	dipeptide binding protein	 0.000000e+00	 0	1.203509e-04	 2.632149e-02	 3.375409e-01	 7.850106e-01	1.702194e-04		36	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7795811	0.6547351	U	0.4686274	0.6162291
13773	129	182888	182889	1	  91	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.619210	3.519007	1.0644511	747	ABC-type dipeptide transport system, periplasmic component	E	dipeptide binding protein	1.398456	2.965563	1.0571576	4946	Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system	S	tricorn protease	 0.000000e+00	 0	4.873212e-02	-8.883657e-03	-1.475351e-01	-3.890803e-01	1.764840e+00		 0	 6	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4216377	0.4111186	U	0.4686274	0.6162291
13773	129	182889	182890	1	  41	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.398456	2.965563	1.0571576	4946	Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system	S	tricorn protease	1.376435	3.368019	1.1511502	4243	Predicted membrane protein	S	hypothetical protein	 0.000000e+00	 0	4.849558e-04	 3.968038e-03	 7.428555e-02	 2.693118e-01	3.308323e-02		 6	 0	FALSE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5786696	0.6310514	U	0.4686274	0.6162291
13773	129	182890	182891	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.376435	3.368019	1.1511502	4243	Predicted membrane protein	S	hypothetical protein	1.442563	3.131736	1.0590987	3427	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.372918e-03	 6.619024e-04	 1.440599e-02	-8.534529e-03	3.989430e-01		 0	 5	 TRUE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191052	0.5128399	U	0.4686274	0.6162291
13773	129	182891	182892	1	 107	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.442563	3.131736	1.0590987	3427	Uncharacterized conserved protein	S	conserved hypothetical protein	1.398103	3.182914	1.1020869	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	 3.777386e-02	 1	1.976667e-03	 4.705653e-04	 3.325342e-02	-6.064286e-03	2.050290e-01		 5	 1	FALSE	 TRUE	102	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.7874252	0.5195057	0.5780796	U	0.4686274	0.5573725
13773	129	182892	182893	1	  50	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.398103	3.182914	1.1020869	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	1.486751	3.148604	1.0675211	-	-	-	hypothetical protein	 0.000000e+00	 0	7.858494e-03	-1.884236e-03	-5.330191e-03	-1.856345e-01	7.427979e-01		 1	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4685976	0.4602020	U	0.4686274	0.6162291
13773	129	182893	182894	1	  21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.486751	3.148604	1.0675211	-	-	-	hypothetical protein	1.411740	3.162937	1.0927483	2379	Putative glycerate kinase	G	conserved hypothetical protein	 0.000000e+00	 0	5.626631e-03	-1.402047e-03	 5.162643e-03	-1.259199e-01	5.193287e-01		 0	17	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4830705	0.4896794	U	0.4686274	0.6162291
13773	129	182894	182895	1	  41	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.411740	3.162937	1.0927483	2379	Putative glycerate kinase	G	conserved hypothetical protein	1.472392	3.198898	1.0176870	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	3.678673e-03	-8.326812e-04	 8.128634e-03	-8.524163e-02	3.410990e-01		17	 0	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4966322	0.5274616	U	0.4686274	0.6162291
13773	129	182895	182896	1	 -27	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.472392	3.198898	1.0176870	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.386444	2.940861	1.0805537	1708	Predicted nucleotidyltransferases	R	conserved within P. aerophilum part 1, authentic frameshift	 0.000000e+00	 0	7.387100e-03	-1.363884e-03	 1.438348e-02	-1.533470e-01	6.756007e-01		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4758837	0.4673400	U	0.4686274	0.6162291
13773	129	182896	182897	1	   9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.386444	2.940861	1.0805537	1708	Predicted nucleotidyltransferases	R	conserved within P. aerophilum part 1, authentic frameshift	1.348857	2.938817	1.1404714	1708	Predicted nucleotidyltransferases	R	conserved within P. aerophilum part 2, authentic frameshift	 0.000000e+00	 0	1.412802e-03	 6.659610e-03	 1.145907e-01	 4.205738e-01	6.221253e-02		 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6444089	0.6197187	U	0.4686274	0.6162291
13773	129	182897	182898	1	  42	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.348857	2.938817	1.1404714	1708	Predicted nucleotidyltransferases	R	conserved within P. aerophilum part 2, authentic frameshift	1.484954	3.265165	1.0856873	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	1.852246e-02	-3.441225e-03	-4.333725e-02	-3.205520e-01	1.424203e+00		 0	 1	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4351308	0.4192722	U	0.4686274	0.6162291
13773	129	182898	182899	1	  13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.484954	3.265165	1.0856873	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.415386	3.650212	1.1290516	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	4.839762e-03	-1.208444e-03	 7.040392e-03	-1.055973e-01	4.447856e-01		 1	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4894252	0.5049034	U	0.4686274	0.6162291
13773	129	182899	182900	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.415386	3.650212	1.1290516	-	-	-	conserved hypothetical protein	1.509167	3.836491	1.1630198	-	-	-	hypothetical protein	 0.000000e+00	 0	8.794883e-03	-2.080277e-03	 1.598354e-03	-1.452955e-01	6.730798e-01		 0	 0	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4786624	0.4678741	U	0.4686274	0.6162291
13773	129	182900	182901	1	 255	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.509167	3.836491	1.1630198	-	-	-	hypothetical protein	1.600329	3.510829	1.1083420	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein, authentic frameshift	 0.000000e+00	 0	8.310673e-03	 8.604623e-03	 1.692007e-01	 4.858992e-01	9.189785e-02		 0	 0	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6682905	0.6102320	U	0.4686274	0.6162291
13773	129	182901	182902	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.600329	3.510829	1.1083420	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein, authentic frameshift	1.438339	2.906134	1.0157369	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	2.624106e-02	-1.944266e-03	-5.789413e-02	-2.854326e-02	8.062744e-01		 0	 2	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5126004	0.4545258	U	0.4686274	0.6162291
13773	129	182902	182903	1	  33	Convergent	+	-	 0.000000	0	  0.000000	 -0.13150953	1.438339	2.906134	1.0157369	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.456405	3.180730	1.0716579	3839	ABC-type sugar transport systems, ATPase components	G	multiple sugar-binding transport ATP-binding	 1.190151e-02	 2	3.264017e-04	-6.543182e-05	 1.960367e-02	-4.786758e-03	3.170203e-02		 2	48	 TRUE	 TRUE	105	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.6132969	0.5196908	0.6317872	U	0.4686274	0.5537552
13773	129	182903	182904	1	  -3	Same	-	-	 6.915723	0	  6.915723	  2.64431804	1.456405	3.180730	1.0716579	3839	ABC-type sugar transport systems, ATPase components	G	multiple sugar-binding transport ATP-binding	1.526762	3.676200	1.1594203	395	ABC-type sugar transport system, permease component	G	multiple sugar transport permease	 1.905451e-01	25	4.950037e-03	 3.777689e-04	 3.951643e-02	 9.573515e-02	2.651894e-01	G	48	25	FALSE	 TRUE	104	 TRUE	2.7566619	1.7000583	0.5480306	2.8254320	0.7766777	1.1322281	0.5180563	0.5552137	Y	1.4497162	0.8963834
13773	129	182904	182905	1	  -3	Same	-	-	19.372710	0	 22.263082	 20.55980194	1.526762	3.676200	1.1594203	395	ABC-type sugar transport system, permease component	G	multiple sugar transport permease	1.598461	3.594768	1.1379881	1175	ABC-type sugar transport systems, permease components	G	multiple sugar transport permease	 1.207017e-01	25	5.140868e-03	 1.108438e-02	 1.908413e-01	 5.693456e-01	4.105055e-02	G	25	26	FALSE	 TRUE	103	 TRUE	2.3934852	1.9215157	0.5480306	2.5507294	0.7766777	1.0543956	0.7075462	0.6277229	Y	1.4497162	0.9230737
13773	129	182905	182906	1	  -3	Same	-	-	 6.769770	0	  6.769770	  6.51845511	1.598461	3.594768	1.1379881	1175	ABC-type sugar transport systems, permease components	G	multiple sugar transport permease	1.536019	3.368125	1.0768305	1653	ABC-type sugar transport system, periplasmic component	G	multiple sugar binding protein	 5.944019e-02	 4	3.899099e-03	 1.244581e-02	 1.295168e-01	 6.024470e-01	2.697359e-02	G	26	 4	FALSE	 TRUE	102	 TRUE	2.7639651	1.8071882	0.5480306	2.8314523	0.7323301	0.8805827	0.7205571	0.6345527	Y	1.4497162	0.9083174
13773	129	182906	182907	1	 -24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.536019	3.368125	1.0768305	1653	ABC-type sugar transport system, periplasmic component	G	multiple sugar binding protein	1.523049	3.656721	1.1222440	-	-	-	hypothetical protein	 0.000000e+00	 0	1.682044e-04	 6.063991e-03	 8.649229e-02	 4.459394e-01	3.583442e-03		 4	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6537535	0.6476453	U	0.4686274	0.6162291
13773	129	182907	182908	1	 428	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.523049	3.656721	1.1222440	-	-	-	hypothetical protein	1.983408	4.378442	1.1172547	-	-	-	hypothetical protein	 0.000000e+00	 0	2.119303e-01	 3.812235e-02	 1.172219e+00	 6.375464e-01	1.295558e-01		 0	 0	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7323078	0.5982270	U	0.4686274	0.6162291
13773	129	182908	182909	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.983408	4.378442	1.1172547	-	-	-	hypothetical protein	1.426052	3.197203	1.1057617	1573	Uracil-DNA glycosylase	L	uracil-DNA glycosylase (Pa-UDGb)	 0.000000e+00	 0	3.106458e-01	-1.348165e-02	-8.540464e-01	-1.632180e-01	1.350091e+00		 0	11	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4739474	0.4223570	U	0.4686274	0.6162291
13773	129	182909	182910	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.43963558	1.426052	3.197203	1.1057617	1573	Uracil-DNA glycosylase	L	uracil-DNA glycosylase (Pa-UDGb)	1.364975	3.490128	1.1842578	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	 1.896396e-02	11	3.730456e-03	 2.189899e-03	 6.367716e-02	 1.139139e-01	2.844990e-01		11	18	 TRUE	 TRUE	102	 TRUE	0.4469764	0.2375349	0.5480306	0.4469764	0.7764261	0.6702039	0.5207369	0.5488286	U	0.4686274	0.5374312
13773	129	182910	182911	1	  14	Same	+	+	 0.000000	0	  0.000000	 -0.53435612	1.364975	3.490128	1.1842578	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	1.427123	3.102506	1.0658297	2050	Uncharacterized protein, possibly involved in aromatic compounds catabolism	Q	conserved hypothetical protein	 2.110696e-02	 5	3.862456e-03	 2.097328e-03	 2.779072e-02	 1.048222e-01	2.985872e-01		18	 5	 TRUE	 TRUE	103	 TRUE	0.4469764	0.2327403	0.5480306	0.4469764	0.7448207	0.6849861	0.5192886	0.5425599	U	0.4686274	0.5359122
13773	129	182911	182912	1	  51	Same	+	+	 0.000000	0	  0.000000	 -0.13150953	1.427123	3.102506	1.0658297	2050	Uncharacterized protein, possibly involved in aromatic compounds catabolism	Q	conserved hypothetical protein	1.303558	2.828731	0.9815809	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA)	 2.262946e-03	 5	1.526830e-02	 3.587872e-03	 1.166934e-01	 1.409558e-01	6.188122e-01	0	 5	21	 TRUE	 TRUE	104	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.7448207	0.4996640	0.5281566	0.4748312	N	0.5492530	0.5624819
13773	129	182912	182913	1	  11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.303558	2.828731	0.9815809	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA)	1.591944	3.354662	1.0058994	247	Fe-S oxidoreductase	C	conserved iron-sulfur protein	 2.884300e-03	 2	8.316627e-02	-2.077831e-02	-2.275421e-01	-7.989892e-01	3.203084e+00	0	21	 2	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5119009	0.3834394	0.4005012	N	0.5492530	0.6245624
13773	129	182913	182914	1	 341	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.591944	3.354662	1.0058994	247	Fe-S oxidoreductase	C	conserved iron-sulfur protein	1.455056	3.227308	1.0982611	2847	Uncharacterized protein conserved in bacteria	S	conserved hypothetical protein	 0.000000e+00	 0	1.873837e-02	 5.148354e-04	-2.337569e-02	 1.112434e-01	5.215434e-01		 2	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5201276	0.4890700	U	0.4686274	0.6162291
13773	129	182914	182915	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.455056	3.227308	1.0982611	2847	Uncharacterized protein conserved in bacteria	S	conserved hypothetical protein	1.385291	3.394437	1.1477610	109	Polyprenyltransferase (cytochrome oxidase assembly factor)	O	cytochrome C oxidase assembly factor	 0.000000e+00	 0	4.867158e-03	-2.421302e-04	 2.896890e-02	-7.159227e-02	4.613151e-01		 0	 0	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5009347	0.5017230	U	0.4686274	0.6162291
13773	129	182915	182916	1	  36	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.385291	3.394437	1.1477610	109	Polyprenyltransferase (cytochrome oxidase assembly factor)	O	cytochrome C oxidase assembly factor	1.452395	3.695954	1.2043972	-	-	-	possible respiratory chain protein	 0.000000e+00	 0	4.502909e-03	-6.621277e-05	 8.869725e-03	-5.853721e-02	4.295630e-01		 0	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5042454	0.5075206	U	0.4686274	0.6162291
13773	129	182916	182917	1	 -40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.452395	3.695954	1.2043972	-	-	-	possible respiratory chain protein	1.508304	3.492688	1.1595154	-	-	-	possible respiratory chain protein	 0.000000e+00	 0	3.125891e-03	 5.700667e-05	 2.962690e-02	 5.943778e-02	2.029492e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185825	0.5787234	U	0.4686274	0.6162291
13773	129	182917	182918	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.508304	3.492688	1.1595154	-	-	-	possible respiratory chain protein	1.361189	3.163014	1.1108114	843	Heme/copper-type cytochrome/quinol oxidases, subunit 1	C	cytochrome C oxidase subunit I /III	 0.000000e+00	 0	2.164293e-02	-5.133632e-03	-2.684801e-02	-3.989601e-01	1.621078e+00		 0	 4	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4197390	0.4141928	U	0.4686274	0.6162291
13773	129	182918	182919	1	   0	Same	-	-	 2.856470	0	  2.856470	  2.85647021	1.361189	3.163014	1.1108114	843	Heme/copper-type cytochrome/quinol oxidases, subunit 1	C	cytochrome C oxidase subunit I /III	1.441651	3.071612	1.0249051	1622	Heme/copper-type cytochrome/quinol oxidases, subunit 2	C	cytochrome C oxidase subunit II	 4.118834e-02	 1	6.474143e-03	 8.787630e-04	 1.059006e-02	-3.297191e-03	5.193287e-01	C	 4	 1	FALSE	 TRUE	 99	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6329203	0.8108260	0.5198349	0.4896794	Y	1.4497162	0.8983990
13773	129	182919	182920	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.441651	3.071612	1.0249051	1622	Heme/copper-type cytochrome/quinol oxidases, subunit 2	C	cytochrome C oxidase subunit II	1.393567	3.213829	1.0912597	-	-	-	respiratory chain protein (soxI homolog)	 0.000000e+00	 0	2.312093e-03	 5.633397e-04	 3.557518e-02	-2.162787e-03	2.249511e-01		 1	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199294	0.5726631	U	0.4686274	0.6162291
13773	129	182920	182921	1	 172	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.393567	3.213829	1.0912597	-	-	-	respiratory chain protein (soxI homolog)	1.432538	3.531128	1.1582748	-	-	-	possible respiratory chain protein	 0.000000e+00	 0	1.518789e-03	 1.090285e-03	 2.589661e-02	 3.820924e-02	1.508038e-01		 0	 1	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180429	0.5929737	U	0.4686274	0.6162291
13773	129	182921	182922	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.432538	3.531128	1.1582748	-	-	-	possible respiratory chain protein	1.412896	3.361749	1.1813085	-	-	-	hypothetical protein	 0.000000e+00	 0	3.858217e-04	 7.258404e-04	 3.208522e-02	 2.341253e-02	4.262022e-02		 1	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174254	0.6270113	U	0.4686274	0.6162291
13773	129	182922	182923	1	 105	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.412896	3.361749	1.1813085	-	-	-	hypothetical protein	1.432216	3.347600	1.1294959	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.732511e-04	 7.382610e-04	 2.654001e-02	 2.517951e-02	4.012289e-02		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173926	0.6279101	U	0.4686274	0.6162291
13773	129	182923	182924	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.432216	3.347600	1.1294959	-	-	-	conserved within P. aerophilum	1.375360	2.952954	1.0134064	723	Rieske Fe-S protein	C	Rieske iron sulfur protein (parR)	 0.000000e+00	 0	3.232554e-03	 1.458092e-03	 5.153301e-02	 5.499205e-02	2.927449e-01		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187446	0.5451177	U	0.4686274	0.6162291
13773	129	182924	182925	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.375360	2.952954	1.0134064	723	Rieske Fe-S protein	C	Rieske iron sulfur protein (parR)	1.335048	3.132888	1.0867688	1290	Cytochrome b subunit of the bc complex	C	cytochrome b/b6	 0.000000e+00	 0	1.625066e-03	 8.846014e-03	 1.438620e-01	 5.378609e-01	5.160533e-02	C	 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6904307	0.6233610	Y	1.4497162	0.7118045
13773	129	182925	182926	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.335048	3.132888	1.0867688	1290	Cytochrome b subunit of the bc complex	C	cytochrome b/b6	1.386462	3.231335	1.1013340	-	-	-	hypothetical protein	 0.000000e+00	 0	2.643442e-03	 7.554318e-03	 8.539627e-02	 4.577399e-01	1.029115e-01		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6594011	0.6052131	U	0.4686274	0.6162291
13773	129	182926	182927	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.386462	3.231335	1.1013340	-	-	-	hypothetical protein	1.350646	3.208476	1.1066600	-	-	-	hypothetical protein	 0.000000e+00	 0	1.282799e-03	 6.541518e-03	 1.122922e-01	 4.134028e-01	5.660236e-02		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6406458	0.6215881	U	0.4686274	0.6162291
13773	129	182927	182928	1	 311	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.350646	3.208476	1.1066600	-	-	-	hypothetical protein	1.428910	2.997891	1.0396511	1622	Heme/copper-type cytochrome/quinol oxidases, subunit 2	C	cytochrome C oxidase subunit II	 0.000000e+00	 0	6.125227e-03	 2.265062e-03	 2.272939e-02	 9.905060e-02	4.155945e-01		 0	 5	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185461	0.5095219	U	0.4686274	0.6162291
13773	129	182928	182929	1	  46	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.428910	2.997891	1.0396511	1622	Heme/copper-type cytochrome/quinol oxidases, subunit 2	C	cytochrome C oxidase subunit II	1.367730	3.235138	1.1409101	843	Heme/copper-type cytochrome/quinol oxidases, subunit 1	C	cytochrome C oxidase subunit I	 3.777386e-02	 1	3.742969e-03	 1.880966e-03	 5.922192e-02	 8.705043e-02	3.036408e-01	C	 5	 1	 TRUE	 TRUE	105	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7874252	0.5176988	0.5402395	Y	1.4497162	0.6543650
13773	129	182929	182930	1	  32	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.367730	3.235138	1.1409101	843	Heme/copper-type cytochrome/quinol oxidases, subunit 1	C	cytochrome C oxidase subunit I	1.413556	3.175243	1.0861823	1999	Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic sys	R	senC homolog	 7.562104e-04	 1	2.099959e-03	 3.165563e-03	 4.361095e-02	 1.892174e-01	1.604916e-01		 1	 4	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.5458543	0.5898600	U	0.4686274	0.6162291
13773	129	182930	182931	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.413556	3.175243	1.0861823	1999	Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic sys	R	senC homolog	1.409303	3.363871	1.1611669	-	-	-	hypothetical protein	 0.000000e+00	 0	1.808343e-05	 1.592560e-03	 4.022150e-02	 8.872906e-02	1.592641e-03		 4	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177624	0.6508783	U	0.4686274	0.6162291
13773	129	182931	182932	1	  70	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.409303	3.363871	1.1611669	-	-	-	hypothetical protein	1.337693	2.888852	1.0060334	-	-	-	hypothetical protein	 0.000000e+00	 0	5.127968e-03	 4.785584e-03	 1.050230e-01	 2.693648e-01	2.779871e-01		 0	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5790197	0.5515886	U	0.4686274	0.6162291
13773	129	182932	182933	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.337693	2.888852	1.0060334	-	-	-	hypothetical protein	1.467222	3.121196	1.0701447	-	-	-	hypothetical protein	 0.000000e+00	 0	1.677765e-02	-1.799751e-03	-3.249894e-02	-2.051067e-01	1.184305e+00		 0	 0	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4627947	0.4290592	U	0.4686274	0.6162291
13773	129	182933	182934	1	 -46	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.467222	3.121196	1.0701447	-	-	-	hypothetical protein	1.427155	3.204283	1.1183158	3420	Nitrous oxidase accessory protein	P	nosD homolog	 0.000000e+00	 0	1.605319e-03	-3.836544e-04	 1.710745e-02	-3.629384e-02	1.537988e-01		 0	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5104222	0.5921731	U	0.4686274	0.6162291
13773	129	182934	182935	1	 -15	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.427155	3.204283	1.1183158	3420	Nitrous oxidase accessory protein	P	nosD homolog	1.451652	3.371354	1.1500161	3842	ABC-type spermidine/putrescine transport systems, ATPase components	E	branched-chain amino acid ABC transporter, ATP-binding protein, putative	 0.000000e+00	 0	6.000631e-04	-6.271446e-06	 1.917269e-02	-1.458645e-02	6.106930e-02	0	 0	 0	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5170335	0.6200599	N	0.5492530	0.6245624
13773	129	182935	182936	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.451652	3.371354	1.1500161	3842	ABC-type spermidine/putrescine transport systems, ATPase components	E	branched-chain amino acid ABC transporter, ATP-binding protein, putative	1.413348	3.635179	1.1932787	-	-	-	hypothetical protein	 0.000000e+00	 0	1.467197e-03	-9.844225e-06	 2.429821e-02	-2.737764e-02	1.431545e-01		 0	 0	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5129317	0.5946095	U	0.4686274	0.6162291
13773	129	182936	182937	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.413348	3.635179	1.1932787	-	-	-	hypothetical protein	1.382711	3.481358	1.1454906	-	-	-	hypothetical protein	 0.000000e+00	 0	9.386067e-04	 2.613022e-03	 5.959348e-02	 1.582298e-01	7.976398e-02		 0	 0	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5338917	0.6145887	U	0.4686274	0.6162291
13773	129	182937	182938	1	 140	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.382711	3.481358	1.1454906	-	-	-	hypothetical protein	1.409383	3.156166	1.0822115	1846	Transcriptional regulators	K	conserved hypothetical protein	 0.000000e+00	 0	7.113775e-04	 2.885347e-03	 4.697647e-02	 1.785489e-01	6.069057e-02		 0	 0	 TRUE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5417888	0.6202452	U	0.4686274	0.6162291
13773	129	182938	182939	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.409383	3.156166	1.0822115	1846	Transcriptional regulators	K	conserved hypothetical protein	1.518532	3.892045	1.2385101	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein part 1, authentic frameshift	 0.000000e+00	 0	1.191358e-02	-2.820530e-03	-5.275404e-03	-1.941172e-01	8.637727e-01		 0	 0	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4659516	0.4489519	U	0.4686274	0.6162291
13773	129	182939	182940	1	 -21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.518532	3.892045	1.2385101	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein part 1, authentic frameshift	1.352978	3.289958	1.1136585	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein part 2, authentic frameshift	 0.000000e+00	 0	2.740819e-02	-6.607500e-03	-4.336976e-02	-4.662574e-01	1.887197e+00		 0	 0	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4095356	0.4097465	U	0.4686274	0.6162291
13773	129	182940	182941	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.352978	3.289958	1.1136585	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein part 2, authentic frameshift	1.452016	3.165479	1.0802208	2107	Predicted periplasmic solute-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	9.808645e-03	-6.135801e-05	-4.575256e-03	-7.829385e-02	7.467719e-01		 0	16	 TRUE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4985027	0.4598829	U	0.4686274	0.6162291
13773	129	182941	182942	1	 189	Same	+	+	 0.000000	0	  0.000000	 -0.38282396	1.452016	3.165479	1.0802208	2107	Predicted periplasmic solute-binding protein	R	conserved hypothetical protein	1.365143	2.959612	1.0604748	1444	Predicted P-loop ATPase fused to an acetyltransferase	R	conserved hypothetical protein	 3.190737e-02	 7	7.546900e-03	-5.377316e-05	 3.899929e-02	-7.142735e-02	6.358318e-01		16	 7	 TRUE	 TRUE	118	 TRUE	0.4469764	0.2444483	0.5480306	0.4469764	0.7596462	0.7476592	0.5011009	0.4717106	U	0.4686274	0.5396202
13773	129	182942	182943	1	 -60	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.365143	2.959612	1.0604748	1444	Predicted P-loop ATPase fused to an acetyltransferase	R	conserved hypothetical protein	1.458813	3.771380	1.2529012	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	 0.000000e+00	 0	8.773994e-03	-6.399850e-04	-5.496690e-03	-1.140705e-01	7.375158e-01		 7	 0	 TRUE	 TRUE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4871018	0.4611592	U	0.4686274	0.6162291
13773	129	182943	182944	1	   1	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.458813	3.771380	1.2529012	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	1.340019	2.837302	0.9883096	1601	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	J	translation initiation factor aIF-2B beta subunit	 0.000000e+00	 0	1.411210e-02	-8.264148e-04	 4.243580e-02	-1.367586e-01	9.938697e-01		 0	 9	FALSE	 TRUE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4803958	0.4397299	U	0.4686274	0.6162291
13773	129	182944	182945	1	  34	Same	-	-	 0.000000	0	  0.000000	 -0.38282396	1.340019	2.837302	0.9883096	1601	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	J	translation initiation factor aIF-2B beta subunit	1.414694	3.099063	1.0454646	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	 9.393202e-02	 5	5.576469e-03	 4.087258e-03	 4.044661e-02	 2.185582e-01	3.251538e-01		 9	 5	FALSE	 TRUE	117	 TRUE	0.4469764	0.2444483	0.5480306	0.4469764	0.7448207	0.9882295	0.5565966	0.5328194	U	0.4686274	0.5396202
13773	129	182945	182946	1	   2	Same	-	-	 9.772194	0	 15.025049	 15.02504865	1.414694	3.099063	1.0454646	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	1.465716	3.131943	1.0716464	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	 9.932338e-02	 5	2.603200e-03	-5.256363e-04	 1.169264e-02	-5.942365e-02	2.389957e-01		 5	19	FALSE	 TRUE	116	 TRUE	2.6879054	1.8780151	0.5480306	2.6753053	0.7448207	1.0110272	0.5040202	0.5668045	U	0.4686274	0.8767862
13773	129	182946	182947	1	  54	Same	-	-	 2.856470	0	  5.519058	  3.82588142	1.465716	3.131943	1.0716464	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	1.347525	2.799513	0.9551740	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	 6.022921e-02	19	1.396918e-02	-1.487717e-03	 3.021964e-02	-1.800085e-01	1.043440e+00	I	19	33	FALSE	 TRUE	115	 TRUE	2.8950318	1.7442434	0.5480306	2.8617306	0.7779521	0.8837695	0.4705026	0.4361345	Y	1.4497162	0.8999629
13773	129	182947	182948	1	 105	Divergent	-	+	 0.000000	0	  0.000000	 -4.84252779	1.347525	2.799513	0.9551740	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	1.429292	3.043048	1.0713997	318	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	IQ	long-chain-fatty-acid--CoA ligase	 1.591294e-01	33	6.685893e-03	 2.295576e-03	 2.142089e-02	 9.885211e-02	4.499187e-01		33	38	FALSE	 TRUE	114	FALSE	0.4469764	0.1830041	0.5480306	0.4469764	0.7751042	1.0956259	0.5185126	0.5038000	U	0.4686274	0.5201208
13773	129	182948	182949	1	  23	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.429292	3.043048	1.0713997	318	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	IQ	long-chain-fatty-acid--CoA ligase	1.499708	3.306845	1.1252015	656	Aldo/keto reductases, related to diketogulonate reductase	R	aldo-keto reductase family protein	 9.094140e-03	 1	4.958352e-03	-1.067797e-03	 1.294030e-02	-6.307070e-02	3.989430e-01		38	 1	 TRUE	 TRUE	115	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.5875828	0.5031035	0.5128399	U	0.4686274	0.5517368
13773	129	182949	182950	1	  55	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.499708	3.306845	1.1252015	656	Aldo/keto reductases, related to diketogulonate reductase	R	aldo-keto reductase family protein	1.364370	2.922893	1.0479052	1024	Enoyl-CoA hydratase/carnithine racemase	I	3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase	 3.085292e-02	 1	1.831635e-02	-4.204500e-03	-1.511871e-02	-3.550647e-01	1.457366e+00		 1	 8	 TRUE	 TRUE	116	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7379657	0.4272166	0.4181253	U	0.4686274	0.5517368
13773	129	182950	182951	1	  32	Same	+	+	 0.000000	0	  0.000000	 -0.95176903	1.364370	2.922893	1.0479052	1024	Enoyl-CoA hydratase/carnithine racemase	I	3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase	1.436753	3.045656	1.0646880	1363	Cellulase M and related proteins	G	aminopeptidase from family M42	 2.342197e-04	 8	5.239421e-03	 1.273964e-03	 1.694568e-02	 3.222977e-02	4.275534e-01	0	 8	30	 TRUE	 TRUE	117	 TRUE	0.4469764	0.2130140	0.5480306	0.4469764	0.7652913	0.4451176	0.5174327	0.5078084	N	0.5492530	0.5384611
13773	129	182951	182952	1	   1	Convergent	+	-	 0.000000	0	  0.000000	 -1.99129640	1.436753	3.045656	1.0646880	1363	Cellulase M and related proteins	G	aminopeptidase from family M42	1.493771	3.227166	1.0558005	704	Phosphate uptake regulator	P	phosphate transport system regulator, conjectural	 4.511578e-02	18	3.251040e-03	-6.203946e-04	 1.750042e-02	-2.130982e-02	2.589037e-01	0	30	18	 TRUE	 TRUE	118	FALSE	0.4469764	0.1964042	0.5480306	0.4469764	0.7781393	0.8268968	0.5149450	0.5586400	N	0.5492530	0.5331976
13773	129	182952	182953	1	  81	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.493771	3.227166	1.0558005	704	Phosphate uptake regulator	P	phosphate transport system regulator, conjectural	1.404020	3.081816	1.0616715	-	-	-	paREP1	 0.000000e+00	 0	8.055341e-03	-2.007599e-03	-1.597352e-03	-1.743853e-01	7.049297e-01		18	 0	FALSE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4719743	0.4643453	U	0.4686274	0.6162291
13773	129	182953	182954	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.404020	3.081816	1.0616715	-	-	-	paREP1	1.427601	3.341945	1.1546994	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	 0.000000e+00	 0	5.560577e-04	 1.127106e-03	 2.965448e-02	 5.436890e-02	5.407499e-02		 0	41	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187547	0.6225521	U	0.4686274	0.6162291
13773	129	182954	182955	1	  -9	Same	-	-	22.613200	0	 43.215236	 42.43697819	1.427601	3.341945	1.1546994	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	1.450591	3.193094	1.0693310	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	 9.059973e-02	24	5.285628e-04	 1.907292e-05	 1.952480e-02	-1.273406e-02	5.407499e-02	E	41	24	FALSE	 TRUE	115	 TRUE	2.2870605	2.0325179	0.5480306	2.2151785	0.7769228	0.9801540	0.5175642	0.6225521	Y	1.4497162	0.9333600
13773	129	182955	182956	1	 -12	Same	-	-	10.199138	0	 10.199138	 10.19913779	1.450591	3.193094	1.0693310	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	1.410890	3.317730	1.1690383	4177	ABC-type branched-chain amino acid transport system, permease component	E	branched-chain amino acid transport permease protein	 1.015478e-02	 8	1.576151e-03	 3.246868e-05	 2.528162e-02	-2.695827e-02	1.550051e-01	E	24	 8	FALSE	 TRUE	114	 TRUE	2.6745147	1.8413297	0.5480306	2.7563279	0.7652913	0.5985623	0.5130644	0.5915122	Y	1.4497162	0.9127634
13773	129	182956	182957	1	  -3	Same	-	-	11.403111	0	 11.403111	 11.40311060	1.410890	3.317730	1.1690383	4177	ABC-type branched-chain amino acid transport system, permease component	E	branched-chain amino acid transport permease protein	1.487714	3.610289	1.1972632	559	Branched-chain amino acid ABC-type transport system, permease components	E	branched-chain amino acid transport permease protein	 3.340200e-02	 8	5.901799e-03	-1.471078e-03	 2.721615e-03	-1.310407e-01	5.394299e-01	E	 8	26	FALSE	 TRUE	113	 TRUE	2.6320404	1.8616422	0.5480306	2.7155857	0.7652913	0.7621800	0.4813751	0.4851972	Y	1.4497162	0.9152118
13773	129	182957	182958	1	   0	Same	-	-	 0.000000	0	  0.000000	 -0.21357410	1.487714	3.610289	1.1972632	559	Branched-chain amino acid ABC-type transport system, permease components	E	branched-chain amino acid transport permease protein	1.375830	3.065874	1.0892543	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein	 2.896808e-02	 2	1.251791e-02	-2.744494e-03	-2.019222e-04	-2.670200e-01	1.105484e+00	E	26	 2	FALSE	 TRUE	112	 TRUE	0.4469764	0.2704329	0.5480306	0.4469764	0.6838149	0.7259260	0.4478311	0.4323983	Y	1.4497162	0.6507898
13773	129	182958	182959	1	 122	Same	-	-	 0.000000	0	  0.000000	 -0.30058548	1.375830	3.065874	1.0892543	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein	1.432209	3.229342	1.0977193	1117	ABC-type phosphate transport system, ATPase component	P	phosphate ABC transporter, ATP-binding protein	 6.217154e-03	 2	3.178543e-03	 1.449605e-03	 2.412161e-02	 5.541024e-02	2.844990e-01	0	 2	59	FALSE	 TRUE	111	 TRUE	0.4469764	0.2544953	0.5480306	0.4469764	0.6838149	0.5596796	0.5187138	0.5488286	N	0.5492530	0.5515662
13773	129	182959	182960	1	  39	Same	-	-	47.019214	0	 87.522171	 86.27552270	1.432209	3.229342	1.0977193	1117	ABC-type phosphate transport system, ATPase component	P	phosphate ABC transporter, ATP-binding protein	1.330439	3.072935	1.0753204	581	ABC-type phosphate transport system, permease component	P	phosphate ABC transporter, permease protein	 1.012596e-01	26	1.035718e-02	 2.320404e-03	 8.408679e-02	 7.734203e-02	6.079930e-01	P	59	26	FALSE	 TRUE	110	 TRUE	2.0684664	2.0720448	0.5480306	2.0631503	0.7764129	1.0202977	0.5178295	0.4757686	Y	1.4497162	0.9380194
13773	129	182960	182961	1	  -3	Same	-	-	18.095690	0	 40.248561	 40.24856069	1.330439	3.072935	1.0753204	581	ABC-type phosphate transport system, permease component	P	phosphate ABC transporter, permease protein	1.396074	3.447193	1.1804258	573	ABC-type phosphate transport system, permease component	P	phosphate ABC transporter, permease protein	 2.017586e-02	10	4.308002e-03	 6.691070e-03	 6.959004e-02	 3.973780e-01	1.692157e-01	P	26	10	FALSE	 TRUE	109	 TRUE	2.4895052	2.0151334	0.5480306	2.2776779	0.7739415	0.6826809	0.6326930	0.5878822	Y	1.4497162	0.9303602
13773	129	182961	182962	1	  23	Same	-	-	19.705128	0	 43.850429	 43.85042877	1.396074	3.447193	1.1804258	573	ABC-type phosphate transport system, permease component	P	phosphate ABC transporter, permease protein	1.400915	3.042005	1.0869453	226	ABC-type phosphate transport system, periplasmic component	P	phosphate-binding periplasmic protein, putative	 6.972357e-02	10	2.343611e-05	 2.792385e-03	 5.208637e-02	 1.874557e-01	2.264094e-03	P	10	19	FALSE	 TRUE	108	 TRUE	2.3867167	2.0346988	0.5480306	2.2071487	0.7739415	0.9130389	0.5450862	0.6496996	Y	1.4497162	0.9327618
13773	129	182962	182963	1	 146	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.400915	3.042005	1.0869453	226	ABC-type phosphate transport system, periplasmic component	P	phosphate-binding periplasmic protein, putative	1.401285	3.003545	1.0640064	-	-	-	hypothetical protein	 0.000000e+00	 0	1.370616e-07	 2.529329e-03	 5.021675e-02	 1.663827e-01	1.472486e-05		19	 0	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5372013	0.6556702	U	0.4686274	0.6162291
13773	129	182963	182964	1	 369	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.401285	3.003545	1.0640064	-	-	-	hypothetical protein	1.298024	2.625571	0.9152419	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.066289e-02	 7.684959e-03	 1.639506e-01	 3.851105e-01	2.944083e-01		 0	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6276371	0.5440712	U	0.4686274	0.6162291
13773	129	182964	182965	1	 161	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.298024	2.625571	0.9152419	-	-	-	conserved hypothetical protein	1.406619	2.983106	1.0009545	-	-	-	hypothetical protein	 0.000000e+00	 0	1.179290e-02	 6.866909e-03	 4.638405e-02	 3.268707e-01	3.648049e-01		 0	 0	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6026224	0.5200138	U	0.4686274	0.6162291
13773	129	182965	182966	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.406619	2.983106	1.0009545	-	-	-	hypothetical protein	1.350831	2.882962	1.0283434	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.112354e-03	 4.502555e-03	 9.397336e-02	 2.657808e-01	1.820794e-01		 0	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5760302	0.5845929	U	0.4686274	0.6162291
13773	129	182966	182967	1	 121	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.350831	2.882962	1.0283434	-	-	-	conserved within P. aerophilum	1.427344	3.179429	1.0575409	-	-	-	hypothetical protein	 0.000000e+00	 0	5.854330e-03	 2.418390e-03	 2.480140e-02	 1.130604e-01	3.902653e-01		 0	 0	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5203882	0.5139757	U	0.4686274	0.6162291
13773	129	182967	182968	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.427344	3.179429	1.0575409	-	-	-	hypothetical protein	1.429364	3.487701	1.1304809	-	-	-	hypothetical protein	 0.000000e+00	 0	4.079856e-06	 5.297638e-04	 2.669548e-02	 1.811217e-02	5.300950e-04		 0	 0	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177867	0.6531640	U	0.4686274	0.6162291
13773	129	182968	182969	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.429364	3.487701	1.1304809	-	-	-	hypothetical protein	1.470264	3.542717	1.1559670	-	-	-	hypothetical protein	 0.000000e+00	 0	1.672809e-03	-4.157095e-04	 1.554913e-02	-3.366398e-02	1.568233e-01		 0	 0	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5108846	0.5907175	U	0.4686274	0.6162291
13773	129	182969	182970	1	 815	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.470264	3.542717	1.1559670	-	-	-	hypothetical protein	1.676700	3.451697	1.1080663	-	-	-	paREP6, authentic frameshift	 0.000000e+00	 0	4.261576e-02	 4.251808e-03	 1.984604e-01	 2.605299e-01	4.675915e-01		 0	 0	 TRUE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5740192	0.4996268	U	0.4686274	0.6162291
13773	129	182970	182971	1	 241	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.676700	3.451697	1.1080663	-	-	-	paREP6, authentic frameshift	1.469320	3.619400	1.1930264	-	-	-	hypothetical protein	 0.000000e+00	 0	4.300655e-02	 4.039038e-03	-6.013437e-02	 2.531910e-01	4.781462e-01		 0	 0	FALSE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5707698	0.4970610	U	0.4686274	0.6162291
13773	129	182971	182972	1	 215	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.469320	3.619400	1.1930264	-	-	-	hypothetical protein	1.546951	3.549690	1.0811025	-	-	-	hypothetical protein	 0.000000e+00	 0	6.026644e-03	 1.713056e-03	 6.314033e-02	 1.948717e-01	2.220485e-01		 0	 0	 TRUE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5480452	0.5735582	U	0.4686274	0.6162291
13773	129	182972	182973	1	 282	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.546951	3.549690	1.0811025	-	-	-	hypothetical protein	1.611163	3.273207	0.9280749	-	-	-	hypothetical protein	 0.000000e+00	 0	4.123161e-03	 1.526736e-02	 2.408834e-01	 6.518319e-01	2.239651e-02		 0	 0	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7374439	0.6365803	U	0.4686274	0.6162291
13773	129	182973	182974	1	 -25	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.611163	3.273207	0.9280749	-	-	-	hypothetical protein	1.690921	3.648498	1.0978687	-	-	-	hypothetical protein	 0.000000e+00	 0	6.361282e-03	 3.826938e-02	 5.490699e-01	 8.557417e-01	6.493663e-03		 0	 0	FALSE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7955742	0.6450314	U	0.4686274	0.6162291
13773	129	182974	182975	1	 185	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.690921	3.648498	1.0978687	-	-	-	hypothetical protein	1.520748	3.685754	1.1641223	-	-	-	hypothetical protein	 0.000000e+00	 0	2.895883e-02	 1.661241e-02	 8.148920e-02	 6.065830e-01	1.145482e-01		 0	 0	FALSE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7226309	0.6020917	U	0.4686274	0.6162291
13773	129	182975	182976	1	 -19	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.520748	3.685754	1.1641223	-	-	-	hypothetical protein	1.481775	3.394757	1.0675836	-	-	-	hypothetical protein	 0.000000e+00	 0	1.518904e-03	 2.107118e-03	 3.550352e-02	 2.384897e-01	6.144920e-02		 0	 0	 TRUE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5640447	0.6199051	U	0.4686274	0.6162291
13773	129	182976	182977	1	 -26	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.481775	3.394757	1.0675836	-	-	-	hypothetical protein	1.515789	3.621809	1.2193998	1966	Carbon starvation protein, predicted membrane protein	T	carbon starvation protein A homolog	 0.000000e+00	 0	1.156960e-03	 1.956455e-03	 5.179991e-02	 2.277023e-01	4.817739e-02		 0	10	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5609786	0.6245582	U	0.4686274	0.6162291
13773	129	182977	182978	1	  74	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.515789	3.621809	1.2193998	1966	Carbon starvation protein, predicted membrane protein	T	carbon starvation protein A homolog	1.391368	3.039794	1.0241503	-	-	-	hypothetical protein	 0.000000e+00	 0	1.548051e-02	-3.865352e-03	-2.583816e-02	-2.939430e-01	1.187648e+00		10	 0	FALSE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4422193	0.4288368	U	0.4686274	0.6162291
13773	129	182978	182979	1	 223	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.391368	3.039794	1.0241503	-	-	-	hypothetical protein	1.671911	3.754420	1.1116133	3	Oxyanion-translocating ATPase	P	arsenical pump-driving ATPase	 0.000000e+00	 0	7.870438e-02	-1.323657e-02	-1.968602e-02	-4.670720e-01	2.081742e+00		 0	 7	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4093136	0.4073179	U	0.4686274	0.6162291
13773	129	182979	182980	1	 275	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.671911	3.754420	1.1116133	3	Oxyanion-translocating ATPase	P	arsenical pump-driving ATPase	1.475642	3.051429	1.1456119	-	-	-	hypothetical protein	 0.000000e+00	 0	3.852161e-02	 5.347319e-03	-3.873855e-02	 3.113813e-01	3.912248e-01		 7	 0	 TRUE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5971763	0.5136669	U	0.4686274	0.6162291
13773	129	182980	182981	1	 296	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.475642	3.051429	1.1456119	-	-	-	hypothetical protein	1.372301	3.366729	1.0768025	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.067941e-02	-1.917901e-03	 1.270594e-02	-2.100130e-01	9.395456e-01		 0	 0	FALSE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4616204	0.4435238	U	0.4686274	0.6162291
13773	129	182981	182982	1	 164	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.372301	3.366729	1.0768025	-	-	-	conserved within P. aerophilum	1.712325	3.897075	1.1201774	-	-	-	P. aerophilum family 321 protein	 0.000000e+00	 0	1.156165e-01	-2.063771e-02	-6.354674e-02	-6.251092e-01	2.609849e+00		 0	 0	FALSE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3919466	0.4027255	U	0.4686274	0.6162291
13773	129	182982	182983	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.712325	3.897075	1.1201774	-	-	-	P. aerophilum family 321 protein	1.471451	3.511123	1.1837908	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein part 1, authentic frameshift	 0.000000e+00	 0	5.802032e-02	 5.233718e-03	-8.995011e-02	 2.718515e-01	4.813357e-01		 0	 0	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5809077	0.4963031	U	0.4686274	0.6162291
13773	129	182983	182984	1	  43	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.471451	3.511123	1.1837908	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein part 1, authentic frameshift	1.432841	3.414053	1.1321474	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein part 2, authentic frameshift	 0.000000e+00	 0	1.490714e-03	-3.721115e-04	 1.623921e-02	-2.143940e-02	1.268081e-01		 0	 0	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5148089	0.5988589	U	0.4686274	0.6162291
13773	129	182984	182985	1	 229	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.432841	3.414053	1.1321474	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein part 2, authentic frameshift	1.310032	2.893772	0.9805899	-	-	-	hypothetical protein	 0.000000e+00	 0	1.508192e-02	 2.622514e-03	 1.012733e-01	 7.079713e-02	7.152772e-01		 0	 0	 TRUE	 TRUE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180874	0.4631357	U	0.4686274	0.6162291
13773	129	182985	182986	1	  22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.310032	2.893772	0.9805899	-	-	-	hypothetical protein	1.606539	3.507720	1.1069389	-	-	-	paREP10	 0.000000e+00	 0	8.791635e-02	-2.193157e-02	-2.253118e-01	-8.077952e-01	3.233373e+00		 0	 0	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3824855	0.4002962	U	0.4686274	0.6162291
13773	129	182986	182987	1	 147	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.606539	3.507720	1.1069389	-	-	-	paREP10	1.601012	3.599903	1.0870614	-	-	-	hypothetical protein	 0.000000e+00	 0	3.055611e-05	 2.321282e-02	 2.878702e-01	 7.580641e-01	9.954005e-05		 0	 0	FALSE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7698915	0.6550803	U	0.4686274	0.6162291
13773	129	182987	182988	1	 506	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.601012	3.599903	1.0870614	-	-	-	hypothetical protein	1.439780	3.114049	1.0629517	1056	Nicotinamide mononucleotide adenylyltransferase	H	cytidylyltransferase	 0.000000e+00	 0	2.599576e-02	-1.737567e-03	-5.608477e-02	-9.965785e-03	7.694912e-01		 0	10	 TRUE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186744	0.4579043	U	0.4686274	0.6162291
13773	129	182988	182989	1	 415	Same	-	-	 0.000000	0	  0.000000	 -0.90107974	1.439780	3.114049	1.0629517	1056	Nicotinamide mononucleotide adenylyltransferase	H	cytidylyltransferase	1.413560	3.048733	1.0834067	16	Phenylalanyl-tRNA synthetase alpha subunit	J	phenylalanyl-tRNA synthetase alpha subunit	 1.890957e-01	10	6.874424e-04	 4.393591e-04	 2.916708e-02	 3.198240e-03	7.092023e-02	0	10	11	FALSE	 TRUE	115	 TRUE	0.4469764	0.2149923	0.5480306	0.4469764	0.7739415	1.1270741	0.5197020	0.6175203	N	0.5492530	0.5390874
13773	129	182989	182990	1	  31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413560	3.048733	1.0834067	16	Phenylalanyl-tRNA synthetase alpha subunit	J	phenylalanyl-tRNA synthetase alpha subunit	1.344734	2.959863	1.0258603	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	 0.000000e+00	 0	4.737134e-03	 4.035178e-03	 9.317329e-02	 2.253693e-01	2.844990e-01	0	11	 0	FALSE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5598594	0.5488286	N	0.5492530	0.6245624
13773	129	182990	182991	1	  25	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.344734	2.959863	1.0258603	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	1.360988	2.969464	0.9967276	-	-	-	hypothetical protein	 0.000000e+00	 0	2.642154e-04	 9.642482e-03	 1.253457e-01	 5.814777e-01	8.910896e-03		 0	 0	FALSE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7135880	0.6435760	U	0.4686274	0.6162291
13773	129	182991	182992	1	  37	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.360988	2.969464	0.9967276	-	-	-	hypothetical protein	1.293059	2.833885	1.0068171	4046	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	4.614367e-03	 1.431409e-02	 2.310110e-01	 6.860006e-01	5.770319e-02		 0	 5	FALSE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7483293	0.6211938	U	0.4686274	0.6162291
13773	129	182992	182993	1	 110	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.293059	2.833885	1.0068171	4046	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.431678	3.162982	1.0867045	-	-	-	hypothetical protein	 0.000000e+00	 0	1.921512e-02	 3.121562e-03	-5.441423e-03	 9.107503e-02	7.427979e-01		 5	 0	FALSE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178515	0.4602020	U	0.4686274	0.6162291
13773	129	182993	182994	1	  62	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.431678	3.162982	1.0867045	-	-	-	hypothetical protein	1.385930	3.491610	1.1477299	-	-	-	hypothetical protein	 0.000000e+00	 0	2.092863e-03	 1.290607e-03	 4.572355e-02	 5.163596e-02	2.001927e-01		 0	 0	FALSE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187846	0.5800294	U	0.4686274	0.6162291
13773	129	182994	182995	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.385930	3.491610	1.1477299	-	-	-	hypothetical protein	1.363081	3.046021	1.0742640	1196	Chromosome segregation ATPases	D	hypothetical protein	 0.000000e+00	 0	5.220864e-04	 5.781167e-03	 9.725563e-02	 3.831055e-01	2.672209e-02		 0	 0	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6261711	0.6346538	U	0.4686274	0.6162291
13773	129	182995	182996	1	  36	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.363081	3.046021	1.0742640	1196	Chromosome segregation ATPases	D	hypothetical protein	1.398737	3.041175	1.0351818	-	-	-	hypothetical protein	 0.000000e+00	 0	1.271367e-03	 4.650152e-03	 6.234402e-02	 3.056174e-01	7.464679e-02		 0	 0	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5938727	0.6164920	U	0.4686274	0.6162291
13773	129	182996	182997	1	 121	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.398737	3.041175	1.0351818	-	-	-	hypothetical protein	1.273536	2.621002	1.0311313	-	-	-	paREP2a	 0.000000e+00	 0	1.567516e-02	 9.365185e-03	 2.035289e-01	 4.222171e-01	2.944083e-01		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6453590	0.5440712	U	0.4686274	0.6162291
13773	129	182997	182998	1	 147	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.273536	2.621002	1.0311313	-	-	-	paREP2a	1.809876	3.811674	1.1584036	-	-	-	paREP2a	 0.000000e+00	 0	2.876600e-01	-6.375850e-02	-4.787240e-01	-9.679552e-01	3.872106e+00		 0	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3776941	0.3989272	U	0.4686274	0.6162291
13773	129	182998	182999	1	 250	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.809876	3.811674	1.1584036	-	-	-	paREP2a	1.399627	3.098597	1.0950888	-	-	-	paREP9, associated with SRSRs, authentic frameshift	 0.000000e+00	 0	1.683043e-01	-1.855725e-02	-5.157863e-01	-4.211481e-01	2.007126e+00		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4150208	0.4080068	U	0.4686274	0.6162291
13773	129	182999	183000	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.399627	3.098597	1.0950888	-	-	-	paREP9, associated with SRSRs, authentic frameshift	1.612936	3.774628	1.1628738	-	-	-	hypothetical protein	 0.000000e+00	 0	4.550064e-02	-8.362427e-03	-1.757214e-02	-3.768510e-01	1.722279e+00		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4235173	0.4119763	U	0.4686274	0.6162291
13773	129	183000	183001	1	 152	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.612936	3.774628	1.1628738	-	-	-	hypothetical protein	1.407081	3.020865	1.0636785	-	-	-	hypothetical protein	 0.000000e+00	 0	4.237629e-02	-7.158324e-03	-1.242441e-01	-2.991638e-01	1.500296e+00		 0	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4405807	0.4170968	U	0.4686274	0.6162291
13773	129	183001	183002	1	 119	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.407081	3.020865	1.0636785	-	-	-	hypothetical protein	1.226436	2.658435	0.9939651	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein, part 1 authentic frameshift	 0.000000e+00	 0	3.263230e-02	 9.968323e-03	 2.608164e-01	 3.358805e-01	4.356203e-01		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6074025	0.5060722	U	0.4686274	0.6162291
13773	129	183002	183003	1	  64	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.226436	2.658435	0.9939651	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein, part 1 authentic frameshift	1.345639	2.905036	1.0418545	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein, part 2 authentic frameshift	 0.000000e+00	 0	1.420922e-02	 2.379002e-02	 1.987861e-01	 8.033589e-01	3.651824e-02		 0	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7875319	0.6293389	U	0.4686274	0.6162291
13773	129	183003	183004	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.345639	2.905036	1.0418545	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein, part 2 authentic frameshift	1.340534	2.727959	1.0288098	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.605781e-05	 1.172373e-02	 1.606229e-01	 6.685381e-01	5.660236e-04		 0	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7435095	0.6530578	U	0.4686274	0.6162291
13773	129	183004	183005	1	 821	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.340534	2.727959	1.0288098	-	-	-	conserved within P. aerophilum	1.468181	3.058219	1.0625454	110	Acetyltransferase (isoleucine patch superfamily)	R	acetyl/acyl transferase related protein	 0.000000e+00	 0	1.629382e-02	-1.861163e-03	-3.151740e-02	-2.075652e-01	1.166002e+00		 0	 2	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4622093	0.4298977	U	0.4686274	0.6162291
13773	129	183005	183006	1	  41	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.468181	3.058219	1.0625454	110	Acetyltransferase (isoleucine patch superfamily)	R	acetyl/acyl transferase related protein	1.335638	2.842147	1.0012132	1363	Cellulase M and related proteins	G	aminopeptidase from family M42	 1.134242e-03	 2	1.756769e-02	-1.943359e-03	 3.132677e-02	-2.133255e-01	1.216255e+00		 2	 3	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4743646	0.4605811	0.4276782	U	0.4686274	0.6162291
13773	129	183006	183007	1	  61	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.335638	2.842147	1.0012132	1363	Cellulase M and related proteins	G	aminopeptidase from family M42	1.353422	2.925661	1.0272395	2820	Uridine phosphorylase	F	purine nucleoside phosphorylase	 1.545090e-03	 3	3.162515e-04	 1.134059e-02	 1.436830e-01	 6.471747e-01	8.766593e-03	0	 3	16	FALSE	 TRUE	109	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.7136133	0.4847788	0.7357254	0.6436550	N	0.5492530	0.5604716
13773	129	183007	183008	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.353422	2.925661	1.0272395	2820	Uridine phosphorylase	F	purine nucleoside phosphorylase	1.523015	3.348962	1.1204094	-	-	-	hypothetical protein	 0.000000e+00	 0	2.876185e-02	-7.016897e-03	-7.265388e-02	-4.834878e-01	1.948842e+00		16	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4073074	0.4089996	U	0.4686274	0.6162291
13773	129	183008	183009	1	 533	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.523015	3.348962	1.1204094	-	-	-	hypothetical protein	1.467411	3.678664	1.2303769	2431	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.091854e-03	 1.147221e-03	 2.177588e-02	 1.554592e-01	1.544013e-01		 0	 0	FALSE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5325390	0.5918248	U	0.4686274	0.6162291
13773	129	183009	183010	1	  47	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.467411	3.678664	1.2303769	2431	Predicted membrane protein	S	conserved hypothetical protein	1.765850	3.983333	1.1951509	-	-	-	paREP10	 0.000000e+00	 0	8.906602e-02	 5.036876e-03	 3.300935e-01	 2.404935e-01	5.496237e-01		 0	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5652262	0.4836874	U	0.4686274	0.6162291
13773	129	183010	183011	1	  10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.765850	3.983333	1.1951509	-	-	-	paREP10	1.414557	3.216284	1.1227371	163	3-polyprenyl-4-hydroxybenzoate decarboxylase	H	phenylacrylic acid decarboxylase homolog	 0.000000e+00	 0	1.234068e-01	-1.158336e-02	-3.623671e-01	-2.601565e-01	1.561061e+00		 0	38	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4501861	0.4153650	U	0.4686274	0.6162291
13773	129	183011	183012	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.414557	3.216284	1.1227371	163	3-polyprenyl-4-hydroxybenzoate decarboxylase	H	phenylacrylic acid decarboxylase homolog	1.404644	3.162329	1.0777213	-	-	-	hypothetical protein	 0.000000e+00	 0	9.825768e-05	 1.722033e-03	 4.297625e-02	 9.664691e-02	1.041872e-02		38	 0	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181452	0.6425621	U	0.4686274	0.6162291
13773	129	183012	183013	1	  35	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.404644	3.162329	1.0777213	-	-	-	hypothetical protein	1.434698	3.216302	1.0906587	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	 0.000000e+00	 0	9.032322e-04	 7.804554e-04	 2.502088e-02	 2.331888e-02	9.143314e-02		 0	 0	FALSE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174318	0.6103141	U	0.4686274	0.6162291
13773	129	183013	183014	1	 211	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.434698	3.216302	1.0906587	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	1.430316	3.009829	1.0243015	2520	Predicted methyltransferase	R	conserved hypothetical protein	 0.000000e+00	 0	1.920021e-05	 3.518676e-04	 2.527213e-02	 7.088548e-03	2.264094e-03		 0	 8	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192324	0.6496996	U	0.4686274	0.6162291
13773	129	183014	183015	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.430316	3.009829	1.0243015	2520	Predicted methyltransferase	R	conserved hypothetical protein	1.460312	3.212488	1.0856403	4755	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	8.997287e-04	-1.879802e-04	 1.761368e-02	-2.041160e-02	8.685076e-02		 8	 0	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5152867	0.6122969	U	0.4686274	0.6162291
13773	129	183015	183016	1	  80	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.460312	3.212488	1.0856403	4755	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.395455	3.081282	1.0667224	794	Predicted sugar phosphate isomerase involved in capsule formation	M	conserved protein with sugar isomerase (SIS) domain	 0.000000e+00	 0	4.206436e-03	-4.989080e-04	 2.264861e-02	-8.488411e-02	4.175758e-01		 0	13	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4968247	0.5092380	U	0.4686274	0.6162291
13773	129	183016	183017	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.395455	3.081282	1.0667224	794	Predicted sugar phosphate isomerase involved in capsule formation	M	conserved protein with sugar isomerase (SIS) domain	1.438415	3.034388	1.0252955	1586	S-adenosylmethionine decarboxylase	E	conserved hypothetical protein	 1.640963e-02	 6	1.845542e-03	 7.259842e-04	 2.170754e-02	 1.456171e-02	1.860303e-01	0	13	 6	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7537284	0.6515847	0.5181737	0.5838164	N	0.5492530	0.6245624
13773	129	183017	183018	1	1083	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.438415	3.034388	1.0252955	1586	S-adenosylmethionine decarboxylase	E	conserved hypothetical protein	1.470452	3.237298	1.0863996	-	-	-	hypothetical protein	 0.000000e+00	 0	1.026378e-03	-2.473516e-04	 1.834028e-02	-8.621111e-03	9.329907e-02		 6	 0	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190700	0.6097348	U	0.4686274	0.6162291
13773	129	183018	183019	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.470452	3.237298	1.0863996	-	-	-	hypothetical protein	1.504103	3.097679	1.1198189	-	-	-	hypothetical protein	 0.000000e+00	 0	1.132443e-03	 1.004600e-03	 3.861710e-02	 1.459281e-01	6.689151e-02		 0	 0	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5293416	0.6185855	U	0.4686274	0.6162291
13773	129	183019	183020	1	  48	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.504103	3.097679	1.1198189	-	-	-	hypothetical protein	1.388114	3.020473	1.0858427	1048	Aconitase A	C	aconitate hydratase	 0.000000e+00	 0	1.345353e-02	-3.335462e-03	-1.514854e-02	-2.746881e-01	1.099038e+00		 0	39	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4461137	0.4327437	U	0.4686274	0.6162291
13773	129	183020	183021	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.388114	3.020473	1.0858427	1048	Aconitase A	C	aconitate hydratase	1.497322	3.924759	1.1983406	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.192641e-02	-2.906353e-03	-1.805581e-02	-2.521273e-01	1.009231e+00		39	 0	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4516710	0.4388235	U	0.4686274	0.6162291
13773	129	183021	183022	1	  43	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.497322	3.924759	1.1983406	-	-	-	conserved hypothetical protein	1.486456	3.297070	1.1269694	149	Triosephosphate isomerase	G	triosephosphate isomerase (tpiA)	 0.000000e+00	 0	1.180676e-04	 1.610441e-03	 3.733250e-02	 2.048534e-01	4.877463e-03		 0	13	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5514514	0.6464448	U	0.4686274	0.6162291
13773	129	183022	183023	1	  55	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.486456	3.297070	1.1269694	149	Triosephosphate isomerase	G	triosephosphate isomerase (tpiA)	1.477523	3.066349	1.0655464	-	-	-	hypothetical protein	 0.000000e+00	 0	7.980786e-05	 9.162050e-04	 3.006194e-02	 1.437512e-01	5.772734e-03		13	 0	 TRUE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5288141	0.6458271	U	0.4686274	0.6162291
13773	129	183023	183024	1	  68	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.477523	3.066349	1.0655464	-	-	-	hypothetical protein	1.385536	3.115018	1.0482836	-	-	-	hypothetical protein	 0.000000e+00	 0	8.461538e-03	-1.720830e-03	 9.897470e-03	-1.877190e-01	7.925509e-01		 0	 0	FALSE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4679083	0.4565008	U	0.4686274	0.6162291
13773	129	183024	183025	1	 657	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.385536	3.115018	1.0482836	-	-	-	hypothetical protein	1.358907	2.926221	1.0076296	2125	Ribosomal protein S6E (S10)	J	ribosomal protein S6	 0.000000e+00	 0	7.090929e-04	 6.090790e-03	 1.026607e-01	 3.997953e-01	3.364395e-02		 0	 9	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6354153	0.6306472	U	0.4686274	0.6162291
13773	129	183025	183026	1	   1	Convergent	+	-	 0.000000	0	  0.000000	 -0.26225543	1.358907	2.926221	1.0076296	2125	Ribosomal protein S6E (S10)	J	ribosomal protein S6	1.378641	3.000680	1.0354653	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family	 7.713639e-03	 8	3.894334e-04	 6.728453e-03	 9.112782e-02	 4.339993e-01	1.866170e-02	0	 9	 8	 TRUE	 TRUE	114	FALSE	0.4469764	0.2625645	0.5480306	0.4469764	0.7652913	0.5769711	0.6491974	0.6383656	N	0.5492530	0.5541078
13773	129	183026	183027	1	  74	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.378641	3.000680	1.0354653	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family	1.494498	3.365521	1.1385007	-	-	-	hypothetical protein	 0.000000e+00	 0	1.342277e-02	-3.135967e-03	-2.465140e-02	-2.785437e-01	1.129824e+00		 8	 0	FALSE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4454176	0.4314822	U	0.4686274	0.6162291
13773	129	183027	183028	1	  91	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.494498	3.365521	1.1385007	-	-	-	hypothetical protein	1.483719	3.323961	1.1293493	-	-	-	hypothetical protein	 0.000000e+00	 0	1.161884e-04	 1.393427e-03	 3.496520e-02	 1.856958e-01	5.315674e-03		 0	 0	 TRUE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5444769	0.6461561	U	0.4686274	0.6162291
13773	129	183028	183029	1	  45	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.483719	3.323961	1.1293493	-	-	-	hypothetical protein	1.660699	3.660183	1.1088979	-	-	-	hypothetical protein	 0.000000e+00	 0	3.132198e-02	 6.766071e-03	 2.084485e-01	 3.719994e-01	2.952417e-01		 0	 0	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6209710	0.5436061	U	0.4686274	0.6162291
13773	129	183029	183030	1	 537	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.660699	3.660183	1.1088979	-	-	-	hypothetical protein	1.378714	2.987713	1.0637360	532	Translation initiation factor 2 (IF-2; GTPase)	J	translation initiation factor IF-2 (infB), putative	 0.000000e+00	 0	7.951537e-02	-1.521204e-02	-2.549654e-01	-5.572782e-01	2.348915e+00		 0	30	 TRUE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3982199	0.4045574	U	0.4686274	0.6162291
13773	129	183030	183031	1	 140	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.378714	2.987713	1.0637360	532	Translation initiation factor 2 (IF-2; GTPase)	J	translation initiation factor IF-2 (infB), putative	1.449526	3.099691	1.0047854	-	-	-	paREP2b	 0.000000e+00	 0	5.014267e-03	 1.356811e-04	 8.918909e-03	-4.598456e-02	4.499187e-01		30	 0	FALSE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5076021	0.5038000	U	0.4686274	0.6162291
13773	129	183031	183032	1	 139	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.449526	3.099691	1.0047854	-	-	-	paREP2b	1.400748	3.093083	1.0732087	-	-	-	paREP8	 0.000000e+00	 0	2.379307e-03	 9.454767e-05	 2.834795e-02	-3.188580e-02	2.389957e-01		 0	 1	FALSE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5116101	0.5668045	U	0.4686274	0.6162291
13773	129	183032	183033	1	  97	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.400748	3.093083	1.0732087	-	-	-	paREP8	1.403610	3.026879	1.1113284	-	-	-	hypothetical protein	 0.000000e+00	 0	8.191606e-06	 2.419966e-03	 4.831721e-02	 1.569034e-01	8.958605e-04		 1	 0	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5332136	0.6519767	U	0.4686274	0.6162291
13773	129	183033	183034	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.403610	3.026879	1.1113284	-	-	-	hypothetical protein	1.387498	3.182457	1.0739115	-	-	-	hypothetical protein	 0.000000e+00	 0	2.596046e-04	 3.053097e-03	 6.100491e-02	 1.993493e-01	1.994099e-02		 0	 0	 TRUE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5498106	0.6374861	U	0.4686274	0.6162291
13773	129	183034	183035	1	  57	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.387498	3.182457	1.0739115	-	-	-	hypothetical protein	1.474565	3.169312	1.0811271	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	7.580732e-03	-1.480594e-03	-5.578011e-03	-1.632498e-01	6.972186e-01		 0	 0	FALSE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4738170	0.4651780	U	0.4686274	0.6162291
13773	129	183035	183036	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.474565	3.169312	1.0811271	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.401243	3.023381	1.0379035	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	 0.000000e+00	 0	5.376108e-03	-1.162081e-03	 1.217357e-02	-1.270520e-01	5.171188e-01		 0	 2	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4825884	0.4904415	U	0.4686274	0.6162291
13773	129	183036	183037	1	  79	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.401243	3.023381	1.0379035	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	1.480009	3.593074	1.1829549	-	-	-	hypothetical protein	 0.000000e+00	 0	6.204081e-03	-1.435098e-03	-3.491467e-04	-1.485915e-01	5.960835e-01		 2	 0	 TRUE	 TRUE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4771554	0.4771498	U	0.4686274	0.6162291
13773	129	183037	183038	1	  72	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.480009	3.593074	1.1829549	-	-	-	hypothetical protein	1.402013	3.480707	1.1993508	-	-	-	hypothetical protein	 0.000000e+00	 0	6.083397e-03	-1.413068e-03	 8.328387e-03	-1.449468e-01	5.807773e-01		 0	 0	FALSE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4789116	0.4797254	U	0.4686274	0.6162291
13773	129	183038	183039	1	 145	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.402013	3.480707	1.1993508	-	-	-	hypothetical protein	1.405091	3.037649	1.0338757	2178	Predicted RNA-binding protein of the translin family	J	conserved hypothetical protein	 0.000000e+00	 0	9.474719e-06	 2.286374e-03	 4.672268e-02	 1.434243e-01	1.246312e-03		 0	 5	 TRUE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5285509	0.6515199	U	0.4686274	0.6162291
13773	129	183039	183040	1	 127	Same	+	+	 0.000000	0	  0.000000	 -0.27466109	1.405091	3.037649	1.0338757	2178	Predicted RNA-binding protein of the translin family	J	conserved hypothetical protein	1.412092	3.076504	1.0906672	154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases	J	Glu-tRNA(Gln) amidotransferase subunit A (gatA)	 1.907648e-04	 5	4.900948e-05	 1.819709e-03	 4.049236e-02	 1.056956e-01	4.770855e-03	J	 5	47	 TRUE	 TRUE	118	 TRUE	0.4469764	0.2574924	0.5480306	0.4469764	0.7448207	0.4435235	0.5193380	0.6465274	Y	1.4497162	0.6470335
13773	129	183040	183041	1	 -18	Convergent	+	-	 0.000000	0	  0.000000	 -0.24929257	1.412092	3.076504	1.0906672	154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases	J	Glu-tRNA(Gln) amidotransferase subunit A (gatA)	1.489381	3.325145	1.1264828	491	Zn-dependent hydrolases, including glyoxylases	R	conserved hypothetical protein	 1.889125e-02	 3	5.973648e-03	-1.492981e-03	 3.023668e-03	-1.288095e-01	5.371776e-01		47	 3	 TRUE	 TRUE	119	FALSE	0.4469764	0.2655387	0.5480306	0.4469764	0.7136133	0.6690864	0.4822256	0.4855756	U	0.4686274	0.5462885
13773	129	183041	183042	1	 290	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.489381	3.325145	1.1264828	491	Zn-dependent hydrolases, including glyoxylases	R	conserved hypothetical protein	1.588313	3.547071	1.1872648	-	-	-	hypothetical protein	 0.000000e+00	 0	9.787574e-03	 5.201377e-03	 1.254976e-01	 3.725672e-01	1.642022e-01		 3	 0	FALSE	 TRUE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6221162	0.5889325	U	0.4686274	0.6162291
13773	129	183042	183043	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.588313	3.547071	1.1872648	-	-	-	hypothetical protein	1.537602	3.509450	1.1113181	-	-	-	conserved within P. aerophilum, partially with both neighbors	 0.000000e+00	 0	2.571618e-03	 1.180383e-02	 1.300164e-01	 5.958479e-01	1.994099e-02		 0	 0	 TRUE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7189058	0.6374861	U	0.4686274	0.6162291
13773	129	183043	183044	1	  33	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.537602	3.509450	1.1113181	-	-	-	conserved within P. aerophilum, partially with both neighbors	1.570903	3.975249	1.1624089	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.108933e-03	 1.030288e-02	 1.585990e-01	 5.682724e-01	1.041872e-02		 0	 0	 TRUE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7067484	0.6425621	U	0.4686274	0.6162291
13773	129	183044	183045	1	 560	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.570903	3.975249	1.1624089	-	-	-	conserved within P. aerophilum	1.450757	3.200797	1.0913033	-	-	-	hypothetical protein	 0.000000e+00	 0	1.443493e-02	-7.594382e-05	-1.642013e-02	 7.304591e-02	5.127131e-01		 0	 0	 TRUE	 TRUE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179659	0.4912800	U	0.4686274	0.6162291
13773	129	183045	183046	1	  79	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.450757	3.200797	1.0913033	-	-	-	hypothetical protein	1.462853	3.198318	1.0717831	2453	Predicted protein-tyrosine phosphatase	T	conserved protein (possible dual specificity phosphatase)	 0.000000e+00	 0	1.462985e-04	-7.282327e-06	 2.098503e-02	 1.883486e-02	1.378777e-02		 0	 3	FALSE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177390	0.6411621	U	0.4686274	0.6162291
13773	129	183046	183047	1	 272	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.462853	3.198318	1.0717831	2453	Predicted protein-tyrosine phosphatase	T	conserved protein (possible dual specificity phosphatase)	1.395874	3.314260	1.1549272	785	Cytochrome c biogenesis protein	O	hypothetical protein	 5.631536e-04	 1	4.486127e-03	-6.362396e-04	 2.079266e-02	-9.545126e-02	4.447856e-01	0	 3	 1	FALSE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.4935866	0.5049034	N	0.5492530	0.6245624
13773	129	183047	183048	1	  16	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.395874	3.314260	1.1549272	785	Cytochrome c biogenesis protein	O	hypothetical protein	1.441085	3.112797	1.0582827	491	Zn-dependent hydrolases, including glyoxylases	R	conserved protein (possibly metallo-beta-lactamase superfamily)	 6.187090e-03	 1	2.044037e-03	 5.722639e-04	 1.987100e-02	 1.056656e-03	2.085187e-01		 1	47	FALSE	 TRUE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5584552	0.5198799	0.5767479	U	0.4686274	0.6162291
13773	129	183048	183049	1	  20	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.441085	3.112797	1.0582827	491	Zn-dependent hydrolases, including glyoxylases	R	conserved protein (possibly metallo-beta-lactamase superfamily)	1.336052	3.093302	1.0972261	-	-	-	hypothetical protein	 0.000000e+00	 0	1.103189e-02	 1.188883e-03	 6.815275e-02	 1.959584e-03	7.204792e-01		47	 0	 TRUE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198176	0.4629446	U	0.4686274	0.6162291
13773	129	183049	183050	1	  25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.336052	3.093302	1.0972261	-	-	-	hypothetical protein	1.502566	3.240328	1.1128651	665	Glycine/D-amino acid oxidases (deaminating)	E	conserved hypothetical protein	 0.000000e+00	 0	2.772670e-02	-5.902309e-03	-7.540775e-02	-4.441725e-01	1.885089e+00		 0	 1	 TRUE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4126228	0.4098218	U	0.4686274	0.6162291
13773	129	183050	183051	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.502566	3.240328	1.1128651	665	Glycine/D-amino acid oxidases (deaminating)	E	conserved hypothetical protein	1.687020	3.769189	1.1585417	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	 0.000000e+00	 0	3.402318e-02	 1.205771e-02	 2.960631e-01	 5.030483e-01	1.954142e-01	0	 1	 0	 TRUE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6735615	0.5811598	N	0.5492530	0.6245624
13773	129	183051	183052	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.687020	3.769189	1.1585417	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	1.448122	3.552377	1.2030935	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	 0.000000e+00	 0	5.707224e-02	-7.707982e-04	-1.292409e-01	 6.288104e-02	8.076533e-01		 0	 2	 TRUE	 TRUE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183717	0.4542712	U	0.4686274	0.6162291
13773	129	183052	183053	1	  36	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.448122	3.552377	1.2030935	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	1.594577	3.459242	1.0468884	1826	Sec-independent protein secretion pathway components	U	conserved hypothetical protein	 7.508473e-04	 2	2.144907e-02	-4.683925e-04	 6.729789e-02	 5.597214e-02	6.285094e-01		 2	 2	 TRUE	 TRUE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4618072	0.5186995	0.4734023	U	0.4686274	0.6162291
13773	129	183053	183054	1	  67	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.594577	3.459242	1.0468884	1826	Sec-independent protein secretion pathway components	U	conserved hypothetical protein	1.571135	3.666243	1.1471694	805	Sec-independent protein secretion pathway component TatC	U	membrane protein (mttB family)	 6.687249e-03	 2	5.494982e-04	 1.714516e-02	 2.055518e-01	 6.927375e-01	2.565660e-03	U	 2	16	FALSE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5679838	0.7505356	0.6491703	Y	1.4497162	0.7118045
13773	129	183054	183055	1	 -15	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.571135	3.666243	1.1471694	805	Sec-independent protein secretion pathway component TatC	U	membrane protein (mttB family)	1.472165	3.388388	1.1256048	-	-	-	hypothetical protein	 0.000000e+00	 0	9.795042e-03	 2.487343e-03	 1.450412e-02	 2.286406e-01	2.747594e-01		16	 0	 TRUE	 TRUE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5615444	0.5525016	U	0.4686274	0.6162291
13773	129	183055	183056	1	  31	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.472165	3.388388	1.1256048	-	-	-	hypothetical protein	1.432892	3.172379	1.0707892	-	-	-	hypothetical protein	 0.000000e+00	 0	1.542398e-03	-3.843096e-04	 1.601768e-02	-2.151655e-02	1.290039e-01		 0	 0	FALSE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5147410	0.5983751	U	0.4686274	0.6162291
13773	129	183056	183057	1	  29	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.432892	3.172379	1.0707892	-	-	-	hypothetical protein	1.430229	3.527537	1.2028116	477	Permeases of the major facilitator superfamily	GEPR	transport protein, conjectural	 0.000000e+00	 0	7.090989e-06	 3.915500e-04	 2.558403e-02	 8.513325e-03	1.301089e-03		 0	 4	 TRUE	 TRUE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190480	0.6513850	U	0.4686274	0.6162291
13773	129	183057	183058	1	  21	Same	+	+	 0.000000	0	  0.000000	 -0.19699536	1.430229	3.527537	1.2028116	477	Permeases of the major facilitator superfamily	GEPR	transport protein, conjectural	1.432779	3.044840	1.0717709	549	Carbamate kinase	E	carbamate kinase	 4.435849e-03	 4	6.502123e-06	 3.939408e-04	 2.508617e-02	 8.857298e-03	1.089051e-03		 4	23	 TRUE	 TRUE	124	 TRUE	0.4469764	0.2720690	0.5480306	0.4469764	0.7323301	0.5403680	0.5189635	0.6517684	U	0.4686274	0.5483499
13773	129	183058	183059	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -7.48438896	1.432779	3.044840	1.0717709	549	Carbamate kinase	E	carbamate kinase	1.444085	3.059771	1.0708534	124	Histidyl-tRNA synthetase	J	histidyl-tRNA synthetase	 1.547415e-02	23	1.278253e-04	 1.360285e-04	 2.158392e-02	-2.123325e-03	1.121681e-02	0	23	71	 TRUE	 TRUE	125	FALSE	0.4469764	0.1789388	0.5480306	0.4469764	0.7771174	0.6410036	0.5199440	0.6422810	N	0.5492530	0.5276550
13773	129	183059	183060	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.63258440	1.444085	3.059771	1.0708534	124	Histidyl-tRNA synthetase	J	histidyl-tRNA synthetase	1.458357	3.193408	1.0838417	1748	Saccharopine dehydrogenase and related proteins	E	saccharopine dehydrogenase, conjectural	 3.502625e-03	 6	2.037016e-04	-5.089593e-05	 2.013015e-02	 4.267264e-03	1.742481e-02	0	71	 6	FALSE	 TRUE	124	 TRUE	0.4469764	0.2291582	0.5480306	0.4469764	0.7537284	0.5256684	0.5195959	0.6390912	N	0.5492530	0.5435688
13773	129	183060	183061	1	  29	Same	-	-	 0.000000	0	  0.000000	 -0.25386871	1.458357	3.193408	1.0838417	1748	Saccharopine dehydrogenase and related proteins	E	saccharopine dehydrogenase, conjectural	1.413774	3.226923	1.1297677	463	Glycosyltransferases involved in cell wall biogenesis	M	dolichol-phosphate mannosyltransferase	 8.364826e-02	 4	1.987680e-03	-2.619970e-04	 2.114504e-02	-4.328225e-02	1.860303e-01	0	 6	 4	FALSE	 TRUE	123	 TRUE	0.4469764	0.2629185	0.5480306	0.4469764	0.7323301	0.9572128	0.5082162	0.5838164	N	0.5492530	0.5542192
13773	129	183061	183062	1	  88	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.413774	3.226923	1.1297677	463	Glycosyltransferases involved in cell wall biogenesis	M	dolichol-phosphate mannosyltransferase	1.425623	3.050311	1.0448407	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	 0.000000e+00	 0	1.404111e-04	 9.694155e-04	 3.016489e-02	 4.537318e-02	1.121681e-02	0	 4	 0	FALSE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185692	0.6422810	N	0.5492530	0.6245624
13773	129	183062	183063	1	 -14	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.425623	3.050311	1.0448407	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	1.359101	2.964259	1.0505633	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-oxoacid ferredoxin oxidoreductase beta subunit	 0.000000e+00	 0	4.425208e-03	 2.378297e-03	 6.848990e-02	 1.215490e-01	3.173243e-01	0	 0	20	 TRUE	 TRUE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5223089	0.5362123	N	0.5492530	0.6245624
13773	129	183063	183064	1	  -3	Same	-	-	25.441114	0	 41.338438	 41.33843843	1.359101	2.964259	1.0505633	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-oxoacid ferredoxin oxidoreductase beta subunit	1.454800	3.167643	1.1210495	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-oxoacid ferredoxin oxidoreductase alpha subunit	 2.249681e-01	19	9.158329e-03	-3.144880e-04	-4.540788e-03	-9.410246e-02	7.375158e-01	C	20	19	FALSE	 TRUE	122	 TRUE	2.2181059	2.0238116	0.5480306	2.2546018	0.7779521	1.1530726	0.4940106	0.4611592	Y	1.4497162	0.9332016
13773	129	183064	183065	1	  98	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.454800	3.167643	1.1210495	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-oxoacid ferredoxin oxidoreductase alpha subunit	1.467931	3.300798	1.0829511	-	-	-	hypothetical protein	 0.000000e+00	 0	1.724163e-04	 5.635499e-05	 2.206171e-02	 3.186224e-02	1.396859e-02		19	 0	FALSE	 TRUE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174130	0.6410384	U	0.4686274	0.6162291
13773	129	183065	183066	1	  27	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.467931	3.300798	1.0829511	-	-	-	hypothetical protein	1.583361	3.479786	1.1043228	105	Nucleoside diphosphate kinase	F	nucleoside diphosphate kinase (ndk)	 0.000000e+00	 0	1.332412e-02	 2.182532e-03	 8.978911e-02	 2.067253e-01	3.474030e-01		 0	60	 TRUE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5522851	0.5254647	U	0.4686274	0.6162291
13773	129	183066	183067	1	 -12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.583361	3.479786	1.1043228	105	Nucleoside diphosphate kinase	F	nucleoside diphosphate kinase (ndk)	1.535758	3.300807	1.1270602	-	-	-	paREP2a	 0.000000e+00	 0	2.266110e-03	 1.113348e-02	 1.247610e-01	 5.835815e-01	1.929605e-02		60	 0	FALSE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7148085	0.6380078	U	0.4686274	0.6162291
13773	129	183067	183068	1	   7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.535758	3.300807	1.1270602	-	-	-	paREP2a	1.433623	2.869128	0.9411958	-	-	-	paREP2a	 0.000000e+00	 0	1.043155e-02	-1.499181e-03	-1.406395e-02	-4.925642e-02	5.901730e-01		 0	 0	FALSE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5068411	0.4780286	U	0.4686274	0.6162291
13773	129	183068	183069	1	 225	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.433623	2.869128	0.9411958	-	-	-	paREP2a	1.456494	3.103662	1.1009442	-	-	-	paREP2b	 0.000000e+00	 0	5.230813e-04	-9.064139e-05	 1.894203e-02	-1.029562e-02	4.683919e-02		 0	 0	FALSE	 TRUE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184930	0.6252488	U	0.4686274	0.6162291
13773	129	183069	183070	1	 204	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.456494	3.103662	1.1009442	-	-	-	paREP2b	1.434990	3.680323	1.2489176	1007	NADH:ubiquinone oxidoreductase subunit 2 (chain N)	C	NADH-ubiquinone oxidoreductase subunit	 0.000000e+00	 0	4.624125e-04	-8.366769e-05	 2.037663e-02	-8.952715e-03	4.293769e-02		 0	 0	 TRUE	 TRUE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5189215	0.6268270	U	0.4686274	0.6162291
13773	129	183070	183071	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.434990	3.680323	1.2489176	1007	NADH:ubiquinone oxidoreductase subunit 2 (chain N)	C	NADH-ubiquinone oxidoreductase subunit	1.430693	3.391675	1.1771712	1009	NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	CP	NADH-ubiquinone oxidoreductase subunit	 0.000000e+00	 0	1.846116e-05	 3.395376e-04	 2.511250e-02	 6.643857e-03	2.191648e-03		 0	23	FALSE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5193109	0.6499017	U	0.4686274	0.6162291
13773	129	183071	183072	1	  36	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.430693	3.391675	1.1771712	1009	NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	CP	NADH-ubiquinone oxidoreductase subunit	1.376700	3.144082	1.1274206	-	-	-	paREP2a	 0.000000e+00	 0	2.915238e-03	 1.546113e-03	 5.189505e-02	 6.660467e-02	2.573440e-01		23	 0	FALSE	 TRUE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182164	0.5597228	U	0.4686274	0.6162291
13773	129	183072	183073	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.376700	3.144082	1.1274206	-	-	-	paREP2a	1.357659	2.868411	0.9714042	-	-	-	paREP2a	 0.000000e+00	 0	3.625719e-04	 7.001234e-03	 1.107424e-01	 4.515891e-01	1.396859e-02		 0	 0	FALSE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6567275	0.6410384	U	0.4686274	0.6162291
13773	129	183073	183074	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.357659	2.868411	0.9714042	-	-	-	paREP2a	1.504300	3.147225	1.0096176	-	-	-	paREP2a	 0.000000e+00	 0	2.150369e-02	-4.959222e-03	-5.245060e-02	-3.924658e-01	1.609374e+00		 0	 0	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4210069	0.4143998	U	0.4686274	0.6162291
13773	129	183074	183075	1	  10	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.504300	3.147225	1.0096176	-	-	-	paREP2a	1.442461	3.027432	1.0387628	-	-	-	paREP2b	 0.000000e+00	 0	3.824137e-03	-4.725786e-04	 8.306197e-03	 6.568466e-03	2.731526e-01		 0	 0	FALSE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5193302	0.5527293	U	0.4686274	0.6162291
13773	129	183075	183076	1	  43	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.442461	3.027432	1.0387628	-	-	-	paREP2b	1.359956	3.201628	1.1015924	651	Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	CP	NADH-ubiquinone oxidoreductase subunit	 0.000000e+00	 0	6.807021e-03	 8.167302e-04	 5.131658e-02	-8.877324e-03	5.405579e-01		 0	 7	 TRUE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5189974	0.4849703	U	0.4686274	0.6162291
13773	129	183076	183077	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.359956	3.201628	1.1015924	651	Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	CP	NADH-ubiquinone oxidoreductase subunit	1.472374	3.691760	1.1604614	-	-	-	NADH-ubiquinone oxidoreductase subunit	 0.000000e+00	 0	1.263787e-02	-1.918474e-03	-2.180777e-02	-2.063978e-01	1.016955e+00		 7	 0	FALSE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4626487	0.4380418	U	0.4686274	0.6162291
13773	129	183077	183078	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.472374	3.691760	1.1604614	-	-	-	NADH-ubiquinone oxidoreductase subunit	1.422490	3.490697	1.1242073	-	-	-	NADH-ubiquinone oxidoreductase subunit	 0.000000e+00	 0	2.488435e-03	-6.064217e-04	 1.465073e-02	-5.652933e-02	2.337719e-01		 0	 0	FALSE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5049120	0.5690733	U	0.4686274	0.6162291
13773	129	183078	183079	1	 101	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.422490	3.490697	1.1242073	-	-	-	NADH-ubiquinone oxidoreductase subunit	1.411342	2.894303	0.9999562	1143	Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)	C	NADH-ubiquinone oxidoreductase subunit	 0.000000e+00	 0	1.242758e-04	 1.157578e-03	 3.622451e-02	 5.972050e-02	1.073442e-02		 0	16	FALSE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185614	0.6423615	U	0.4686274	0.6162291
13773	129	183079	183080	1	  -3	Same	-	-	18.405656	0	 41.934534	 41.80937081	1.411342	2.894303	0.9999562	1143	Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)	C	NADH-ubiquinone oxidoreductase subunit	1.449389	3.556734	1.1987109	1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	C	NADH-ubiquinone oxidoreductase subunit	 1.158520e-01	16	1.447579e-03	 8.024772e-05	 1.761264e-02	-2.291601e-02	1.425743e-01	C	16	38	FALSE	 TRUE	112	 TRUE	2.4586389	2.0303387	0.5480306	2.2389773	0.7783446	1.0505506	0.5144025	0.5949759	Y	1.4497162	0.9318485
13773	129	183080	183081	1	  10	Same	-	-	52.004183	0	 81.277326	 80.28149061	1.449389	3.556734	1.1987109	1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	C	NADH-ubiquinone oxidoreductase subunit	1.420219	3.090201	1.0880497	649	NADH:ubiquinone oxidoreductase 49 kD subunit 7	C	NADH-ubiquinone oxidoreductase subunit	 3.234946e-01	37	8.509079e-04	 6.246183e-05	 2.392575e-02	-1.661848e-02	8.685076e-02	C	38	37	FALSE	 TRUE	111	 TRUE	2.0508598	2.0632116	0.5480306	2.0983145	0.7740003	1.2379091	0.5164671	0.6122969	Y	1.4497162	0.9374898
13773	129	183081	183082	1	  65	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.420219	3.090201	1.0880497	649	NADH:ubiquinone oxidoreductase 49 kD subunit 7	C	NADH-ubiquinone oxidoreductase subunit	1.936089	4.390122	1.2374460	-	-	-	paREP2a	 0.000000e+00	 0	2.661218e-01	-1.510990e-02	 4.382078e-01	-2.182224e-01	1.479686e+00		37	 0	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4596811	0.4174963	U	0.4686274	0.6162291
13773	129	183082	183083	1	  92	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.936089	4.390122	1.2374460	-	-	-	paREP2a	1.475139	3.319046	1.1356706	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.124745e-01	 1.150977e-02	-4.398621e-01	 3.177625e-01	4.613151e-01		 0	 0	FALSE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5987183	0.5017230	U	0.4686274	0.6162291
13773	129	183083	183084	1	  64	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.475139	3.319046	1.1356706	-	-	-	conserved within P. aerophilum	1.392875	3.147388	0.9880515	-	-	-	paREP10, authentic frameshift	 0.000000e+00	 0	6.767322e-03	-1.389575e-03	 1.175438e-02	-1.510594e-01	6.285094e-01		 0	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4762668	0.4734023	U	0.4686274	0.6162291
13773	129	183084	183085	1	 155	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.392875	3.147388	0.9880515	-	-	-	paREP10, authentic frameshift	1.441403	3.139725	1.0359430	302	GTP cyclohydrolase I	H	GTP cyclohydrolase I	 0.000000e+00	 0	2.354901e-03	 5.845906e-04	 1.913034e-02	-3.639985e-04	2.256797e-01		 0	37	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199812	0.5724137	U	0.4686274	0.6162291
13773	129	183085	183086	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.441403	3.139725	1.0359430	302	GTP cyclohydrolase I	H	GTP cyclohydrolase I	1.433682	3.267609	1.1084531	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	3-oxoacyl-(acyl carrier protein) reductase	 0.000000e+00	 0	5.960422e-05	 1.769277e-04	 2.334947e-02	-5.359849e-05	4.985249e-03		37	 0	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199683	0.6463622	U	0.4686274	0.6162291
13773	129	183086	183087	1	 -52	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.433682	3.267609	1.1084531	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	3-oxoacyl-(acyl carrier protein) reductase	1.502762	3.409973	1.1472071	-	-	-	hypothetical protein	 0.000000e+00	 0	4.771993e-03	-9.097698e-04	 1.600511e-02	-3.650057e-02	3.510312e-01		 0	 0	 TRUE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5103561	0.5247424	U	0.4686274	0.6162291
13773	129	183087	183088	1	 205	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.502762	3.409973	1.1472071	-	-	-	hypothetical protein	1.411838	3.109882	1.0281633	1522	Transcriptional regulators	K	transcriptional regulatory protein, conjectural	 0.000000e+00	 0	8.267240e-03	-2.031917e-03	-5.747953e-03	-1.544255e-01	6.693073e-01		 0	 1	FALSE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4756276	0.4688853	U	0.4686274	0.6162291
13773	129	183088	183089	1	  24	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.411838	3.109882	1.0281633	1522	Transcriptional regulators	K	transcriptional regulatory protein, conjectural	1.486562	3.209049	1.0785602	-	-	-	hypothetical protein	 0.000000e+00	 0	5.583780e-03	-1.391137e-03	 3.639896e-03	-1.244928e-01	5.138128e-01		 1	 0	 TRUE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4836706	0.4908988	U	0.4686274	0.6162291
13773	129	183089	183090	1	  72	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.486562	3.209049	1.0785602	-	-	-	hypothetical protein	1.466193	3.053890	1.0747932	308	Aminopeptidase N	E	aminopeptidase	 0.000000e+00	 0	4.149258e-04	 5.205022e-04	 2.423868e-02	 9.668402e-02	3.681215e-02		 0	 3	FALSE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181692	0.6292170	U	0.4686274	0.6162291
13773	129	183090	183091	1	   6	Same	+	+	 0.000000	0	  0.000000	 -0.11352903	1.466193	3.053890	1.0747932	308	Aminopeptidase N	E	aminopeptidase	1.487560	3.237043	1.0389386	35	Uracil phosphoribosyltransferase	F	uracil phosphoribosyltransferase	 1.232289e-02	 3	4.565696e-04	 5.352689e-04	 2.976183e-02	 9.826900e-02	3.951033e-02	0	 3	55	 TRUE	 TRUE	113	 TRUE	0.4469764	0.2958778	0.5480306	0.4469764	0.7136133	0.6176927	0.5183863	0.6282866	N	0.5492530	0.5645692
13773	129	183091	183092	1	 -35	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.487560	3.237043	1.0389386	35	Uracil phosphoribosyltransferase	F	uracil phosphoribosyltransferase	1.495062	3.418521	1.1678290	-	-	-	hypothetical protein	 0.000000e+00	 0	5.627639e-05	 1.579392e-03	 4.072532e-02	 2.031112e-01	2.120380e-03		55	 0	 TRUE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5504627	0.6501030	U	0.4686274	0.6162291
13773	129	183092	183093	1	  81	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.495062	3.418521	1.1678290	-	-	-	hypothetical protein	1.459086	3.190362	1.0471715	-	-	-	paREP2b	 0.000000e+00	 0	1.294264e-03	 3.359538e-04	 1.997325e-02	 8.044368e-02	9.283082e-02		 0	 0	FALSE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177562	0.6099430	U	0.4686274	0.6162291
13773	129	183093	183094	1	   7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.459086	3.190362	1.0471715	-	-	-	paREP2b	1.334838	2.781674	1.0233875	-	-	-	paREP2b	 0.000000e+00	 0	1.543748e-02	-8.966746e-04	 4.460232e-02	-1.452672e-01	1.052868e+00		 0	 0	FALSE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4787871	0.4357796	U	0.4686274	0.6162291
13773	129	183094	183095	1	 -24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.334838	2.781674	1.0233875	-	-	-	paREP2b	1.440615	3.346248	1.1144424	-	-	-	paREP2b	 0.000000e+00	 0	1.118879e-02	 1.256157e-03	 1.220901e-03	 3.943907e-03	7.257000e-01		 0	 0	FALSE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196275	0.4622435	U	0.4686274	0.6162291
13773	129	183095	183096	1	  54	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.440615	3.346248	1.1144424	-	-	-	paREP2b	1.490294	3.573741	1.1327745	-	-	-	paREP2b	 0.000000e+00	 0	2.467989e-03	-4.192573e-04	 1.938374e-02	-2.049701e-03	2.022583e-01		 0	 0	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199505	0.5792906	U	0.4686274	0.6162291
13773	129	183096	183097	1	  22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.490294	3.573741	1.1327745	-	-	-	paREP2b	1.412634	2.889943	1.1134940	-	-	-	paREP2b	 0.000000e+00	 0	6.031089e-03	-1.507767e-03	 3.080293e-03	-1.287895e-01	5.394299e-01		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4823466	0.4851972	U	0.4686274	0.6162291
13773	129	183097	183098	1	  46	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.412634	2.889943	1.1134940	-	-	-	paREP2b	1.640972	3.672313	1.2105126	-	-	-	paREP2a	 0.000000e+00	 0	5.213807e-02	-7.347825e-03	 2.228035e-02	-2.666831e-01	1.466646e+00		 0	 0	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4481710	0.4179446	U	0.4686274	0.6162291
13773	129	183098	183099	1	  93	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.640972	3.672313	1.2105126	-	-	-	paREP2a	1.567396	3.315651	1.0246091	-	-	-	paREP2a	 0.000000e+00	 0	5.413449e-03	 2.199170e-02	 2.207737e-01	 7.342628e-01	1.564899e-02		 0	 0	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7635163	0.6400352	U	0.4686274	0.6162291
13773	129	183099	183100	1	 182	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.567396	3.315651	1.0246091	-	-	-	paREP2a	1.447676	3.159342	1.0709606	166	Glucose-6-phosphate isomerase	G	glucose-6-phosphate isomerase, conjectural	 0.000000e+00	 0	1.433283e-02	-4.311808e-04	-1.844201e-02	 4.768734e-02	5.428172e-01		 0	 4	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187117	0.4845925	U	0.4686274	0.6162291
13773	129	183100	183101	1	  17	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.447676	3.159342	1.0709606	166	Glucose-6-phosphate isomerase	G	glucose-6-phosphate isomerase, conjectural	1.514859	3.326402	1.1465614	1061	DNA or RNA helicases of superfamily II	KL	helicase, possible DNA repair rad25	 0.000000e+00	 0	4.513577e-03	-2.359028e-04	 2.817339e-02	 3.551283e-02	2.844990e-01		 4	 0	FALSE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176437	0.5488286	U	0.4686274	0.6162291
13773	129	183101	183102	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.514859	3.326402	1.1465614	1061	DNA or RNA helicases of superfamily II	KL	helicase, possible DNA repair rad25	1.410860	3.031554	1.0303875	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	1.081585e-02	-2.572481e-03	-1.539727e-02	-1.830277e-01	8.131804e-01		 0	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4692822	0.4538896	U	0.4686274	0.6162291
13773	129	183102	183103	1	 117	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.410860	3.031554	1.0303875	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.645711	3.556183	1.0468309	-	-	-	hypothetical protein	 0.000000e+00	 0	5.515525e-02	-7.876330e-03	 2.036418e-02	-2.869722e-01	1.534328e+00		 0	 0	FALSE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4434757	0.4161356	U	0.4686274	0.6162291
13773	129	183103	183104	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.645711	3.556183	1.0468309	-	-	-	hypothetical protein	1.478024	3.038258	0.9557459	-	-	-	hypothetical protein	 0.000000e+00	 0	2.811914e-02	 5.174859e-03	-1.284637e-02	 3.255207e-01	3.366315e-01		 0	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6020978	0.5289643	U	0.4686274	0.6162291
13773	129	183104	183105	1	 334	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.478024	3.038258	0.9557459	-	-	-	hypothetical protein	1.368074	3.154333	1.0325238	-	-	-	hypothetical protein	 0.000000e+00	 0	1.208902e-02	-2.218861e-03	 1.062266e-02	-2.371574e-01	1.056020e+00		 0	 0	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4542561	0.4355435	U	0.4686274	0.6162291
13773	129	183105	183106	1	 190	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.368074	3.154333	1.0325238	-	-	-	hypothetical protein	1.453609	3.067618	1.0749943	60	Isoleucyl-tRNA synthetase	J	isoleucyl-tRNA synthetase	 0.000000e+00	 0	7.316346e-03	-1.846662e-04	 9.614672e-04	-7.957255e-02	6.321653e-01		 0	71	FALSE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4980461	0.4727649	U	0.4686274	0.6162291
13773	129	183106	183107	1	   7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.453609	3.067618	1.0749943	60	Isoleucyl-tRNA synthetase	J	isoleucyl-tRNA synthetase	1.572817	3.265605	1.0591749	-	-	-	paREP2a	 0.000000e+00	 0	1.421039e-02	 2.691196e-04	 6.131364e-02	 9.525276e-02	4.813357e-01		71	 0	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180158	0.4963031	U	0.4686274	0.6162291
13773	129	183107	183108	1	 110	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.572817	3.265605	1.0591749	-	-	-	paREP2a	1.430185	3.019390	1.0217671	-	-	-	paREP2b	 0.000000e+00	 0	2.034383e-02	-2.575165e-03	-4.567144e-02	-9.151736e-02	8.538157e-01		 0	 0	FALSE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4949439	0.4498973	U	0.4686274	0.6162291
13773	129	183108	183109	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430185	3.019390	1.0217671	-	-	-	paREP2b	1.407460	3.041852	1.0418444	-	-	-	paREP2b	 0.000000e+00	 0	5.164010e-04	 9.317255e-04	 3.539089e-02	 3.766325e-02	4.885355e-02		 0	 0	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178788	0.6242586	U	0.4686274	0.6162291
13773	129	183109	183110	1	 366	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.407460	3.041852	1.0418444	-	-	-	paREP2b	1.410305	3.281698	1.1471241	4346	Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase	O	hypothetical protein	 0.000000e+00	 0	8.093535e-06	 1.805085e-03	 4.122900e-02	 1.042785e-01	4.617716e-04		 0	 3	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191924	0.6534780	U	0.4686274	0.6162291
13773	129	183110	183111	1	 -16	Convergent	+	-	 0.000000	0	  0.000000	 -0.13150953	1.410305	3.281698	1.1471241	4346	Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase	O	hypothetical protein	1.489336	3.385011	1.0827097	1645	Uncharacterized Zn-finger containing protein	R	conserved hypothetical protein	 7.283192e-02	 3	6.245867e-03	-1.558995e-03	 1.878392e-03	-1.371203e-01	5.645164e-01		 3	 3	 TRUE	 TRUE	113	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7136133	0.9306064	0.4802728	0.4819602	U	0.4686274	0.5537552
13773	129	183111	183112	1	  20	Divergent	-	+	 0.000000	0	  0.000000	 -0.06317890	1.489336	3.385011	1.0827097	1645	Uncharacterized Zn-finger containing protein	R	conserved hypothetical protein	1.504212	3.367551	1.0832202	2112	Predicted Ser/Thr protein kinase	T	conserved hypothetical protein	 4.578021e-02	 1	2.213055e-04	 2.004139e-03	 4.759953e-02	 2.341488e-01	8.910896e-03		 3	 1	FALSE	 TRUE	112	FALSE	0.4469764	0.3037120	0.5480306	0.4469764	0.6329203	0.8313457	0.5632668	0.6435760	U	0.4686274	0.5583141
13773	129	183112	183113	1	  83	Convergent	+	-	 0.000000	0	  0.000000	 -0.06317890	1.504212	3.367551	1.0832202	2112	Predicted Ser/Thr protein kinase	T	conserved hypothetical protein	1.459045	3.221731	1.0523798	2016	Predicted RNA-binding protein (contains PUA domain)	J	conserved protein with predicted RNA binding PUA domain	 3.279005e-02	 1	2.040054e-03	 4.042032e-04	 1.852749e-02	 8.964789e-02	1.334520e-01	0	 1	 7	 TRUE	 TRUE	113	FALSE	0.4469764	0.3037120	0.5480306	0.4469764	0.6329203	0.7581838	0.5177916	0.5974546	N	0.5492530	0.5670214
13773	129	183113	183114	1	 134	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.459045	3.221731	1.0523798	2016	Predicted RNA-binding protein (contains PUA domain)	J	conserved protein with predicted RNA binding PUA domain	1.410174	3.137232	1.0713799	1395	Predicted transcriptional regulator	K	hypothetical protein	 0.000000e+00	 0	2.388439e-03	-3.154309e-04	 2.121553e-02	-5.275682e-02	2.322900e-01	0	 7	 0	FALSE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5059956	0.5700736	N	0.5492530	0.6245624
13773	129	183114	183115	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.410174	3.137232	1.0713799	1395	Predicted transcriptional regulator	K	hypothetical protein	1.503243	3.227130	1.1168623	1867	N2,N2-dimethylguanosine tRNA methyltransferase	J	N2,N2-dimethylguonasine tRNA methyltransferase	 0.000000e+00	 0	8.661863e-03	-2.137212e-03	-1.738582e-03	-1.650156e-01	7.049297e-01	0	 0	13	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4736865	0.4643453	N	0.5492530	0.6245624
13773	129	183115	183116	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -1.00117141	1.503243	3.227130	1.1168623	1867	N2,N2-dimethylguanosine tRNA methyltransferase	J	N2,N2-dimethylguonasine tRNA methyltransferase	1.522231	3.456674	1.1157389	237	Dephospho-CoA kinase	H	adenylate kinase, conjectural	 2.704009e-01	13	3.605498e-04	 3.672959e-03	 6.959905e-02	 3.328555e-01	1.154429e-02	0	13	13	 TRUE	 TRUE	114	 TRUE	0.4469764	0.2105111	0.5480306	0.4469764	0.7781369	1.2002299	0.6047339	0.6421803	N	0.5492530	0.5376684
13773	129	183116	183117	1	  62	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.522231	3.456674	1.1157389	237	Dephospho-CoA kinase	H	adenylate kinase, conjectural	1.433689	3.189965	1.1058927	-	-	-	paREP2b	 0.000000e+00	 0	7.839618e-03	-1.254080e-03	-5.872824e-03	-4.373283e-02	4.931208e-01		13	 0	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5079782	0.4934901	U	0.4686274	0.6162291
13773	129	183117	183118	1	  40	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.433689	3.189965	1.1058927	-	-	-	paREP2b	1.552638	3.315227	1.0822815	1931	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	1.414884e-02	-1.792395e-03	 2.501619e-02	-5.184329e-02	6.718212e-01		 0	 9	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5062086	0.4681425	U	0.4686274	0.6162291
13773	129	183118	183119	1	 165	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.552638	3.315227	1.0822815	1931	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.511983	3.330909	1.0984484	1041	Predicted DNA modification methylase	L	hypothetical protein	 0.000000e+00	 0	1.652873e-03	 6.134453e-03	 7.575472e-02	 4.314514e-01	3.088746e-02		 9	 0	 TRUE	 TRUE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6479112	0.6324772	U	0.4686274	0.6162291
13773	129	183119	183120	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511983	3.330909	1.0984484	1041	Predicted DNA modification methylase	L	hypothetical protein	1.495022	3.366815	1.1306385	2237	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	2.876621e-04	 2.643496e-03	 4.715730e-02	 2.721938e-01	1.026264e-02		 0	 1	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5813830	0.6426621	U	0.4686274	0.6162291
13773	129	183120	183121	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.495022	3.366815	1.1306385	2237	Predicted membrane protein	S	conserved hypothetical protein	1.416246	3.056409	0.9947379	1340	Uncharacterized archaeal coiled-coil protein	S	conserved hypothetical protein	 3.728161e-04	 1	6.205739e-03	-1.533448e-03	 1.111308e-03	-1.191983e-01	5.259867e-01		 1	 2	FALSE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.4854555	0.4884610	U	0.4686274	0.6162291
13773	129	183121	183122	1	 105	Divergent	-	+	 0.000000	0	  0.000000	 -0.23662690	1.416246	3.056409	0.9947379	1340	Uncharacterized archaeal coiled-coil protein	S	conserved hypothetical protein	1.556902	3.530238	1.1403943	1709	Predicted transcriptional regulator	K	conserved hypothetical protein	 5.377067e-02	 2	1.978420e-02	-3.708351e-03	 2.511747e-03	-1.924174e-01	1.032493e+00		 2	11	FALSE	 TRUE	114	FALSE	0.4469764	0.2691051	0.5480306	0.4469764	0.6838149	0.8640648	0.4667950	0.4369659	U	0.4686274	0.5474145
13773	129	183122	183123	1	   1	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.556902	3.530238	1.1403943	1709	Predicted transcriptional regulator	K	conserved hypothetical protein	1.458279	3.278367	1.1008043	4352	Ribosomal protein L13E	J	ribosomal protein L13	 0.000000e+00	 0	9.726539e-03	 7.265247e-04	 1.082580e-03	 1.208475e-01	3.675914e-01	0	11	 0	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5222160	0.5196393	N	0.5492530	0.6245624
13773	129	183123	183124	1	  76	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.458279	3.278367	1.1008043	4352	Ribosomal protein L13E	J	ribosomal protein L13	1.414442	3.609273	1.1025289	-	-	-	hypothetical protein	 0.000000e+00	 0	1.921680e-03	-2.544412e-04	 2.110968e-02	-4.210250e-02	1.801198e-01		 0	 0	FALSE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5085545	0.5850474	U	0.4686274	0.6162291
13773	129	183124	183125	1	   2	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.414442	3.609273	1.1025289	-	-	-	hypothetical protein	1.598972	3.432873	0.9186114	-	-	-	hypothetical protein	 0.000000e+00	 0	3.405151e-02	-5.453218e-03	 8.819455e-03	-2.299287e-01	1.276224e+00		 0	 0	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4570843	0.4252479	U	0.4686274	0.6162291
13773	129	183125	183126	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.598972	3.432873	0.9186114	-	-	-	hypothetical protein	1.529494	3.181646	1.0569364	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	hypothetical protein	 0.000000e+00	 0	4.827219e-03	 1.152614e-02	 1.156853e-01	 5.824418e-01	3.564359e-02		 0	 0	FALSE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7144012	0.6297015	U	0.4686274	0.6162291
13773	129	183126	183127	1	  30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.529494	3.181646	1.0569364	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	hypothetical protein	1.483815	3.283800	1.1043371	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB (TFIIB)	 0.000000e+00	 0	2.086577e-03	 2.532213e-03	 3.752405e-02	 2.681821e-01	7.675834e-02		 0	11	FALSE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5776273	0.6159494	U	0.4686274	0.6162291
13773	129	183127	183128	1	  68	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.483815	3.283800	1.1043371	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB (TFIIB)	1.442574	3.118717	1.0709417	470	ATPase involved in DNA replication	L	replication factor C small subunit	 0.000000e+00	 0	1.700858e-03	-2.859402e-04	 1.492239e-02	 6.101982e-03	1.460730e-01	0	11	 0	FALSE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5193682	0.5939828	N	0.5492530	0.6245624
13773	129	183128	183129	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.442574	3.118717	1.0709417	470	ATPase involved in DNA replication	L	replication factor C small subunit	1.529081	3.461236	1.1373277	-	-	-	hypothetical protein	 0.000000e+00	 0	7.483496e-03	-6.851514e-04	 2.785617e-02	 1.031918e-02	4.315774e-01		 0	 0	FALSE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5188779	0.5072321	U	0.4686274	0.6162291
13773	129	183129	183130	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.529081	3.461236	1.1373277	-	-	-	hypothetical protein	1.472715	3.254302	1.0936074	1163	Predicted GTPase	R	GTP-binding protein	 0.000000e+00	 0	3.177125e-03	 1.656457e-03	 2.593299e-02	 1.960645e-01	1.449020e-01		 0	11	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5483632	0.5942416	U	0.4686274	0.6162291
13773	129	183130	183131	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.472715	3.254302	1.0936074	1163	Predicted GTPase	R	GTP-binding protein	1.582085	3.497829	1.0664632	1024	Enoyl-CoA hydratase/carnithine racemase	I	enoyl-CoA hydratase, probable	 0.000000e+00	 0	1.196192e-02	 2.786617e-03	 9.554122e-02	 2.423948e-01	2.910863e-01		11	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5660237	0.5467439	U	0.4686274	0.6162291
13773	129	183131	183132	1	  26	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.582085	3.497829	1.0664632	1024	Enoyl-CoA hydratase/carnithine racemase	I	enoyl-CoA hydratase, probable	1.502175	3.086425	1.0720690	538	Isocitrate dehydrogenases	C	isocitrate dehydrogenase	 0.000000e+00	 0	6.385741e-03	 6.636781e-03	 6.150947e-02	 4.318454e-01	9.708748e-02	0	 0	31	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6482321	0.6079718	N	0.5492530	0.6245624
13773	129	183132	183133	1	   3	Convergent	+	-	 0.000000	0	  0.000000	 -1.81914412	1.502175	3.086425	1.0720690	538	Isocitrate dehydrogenases	C	isocitrate dehydrogenase	1.404368	3.036356	1.0346258	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	N-acyltransferase	 1.359634e-01	14	9.566029e-03	-2.387978e-03	-8.116438e-03	-1.929946e-01	7.939179e-01		31	14	 TRUE	 TRUE	109	FALSE	0.4469764	0.1985579	0.5480306	0.4469764	0.7782928	1.0718732	0.4666550	0.4559908	U	0.4686274	0.5250650
13773	129	183133	183134	1	 144	Same	-	-	 0.000000	0	  0.000000	 -0.40136208	1.404368	3.036356	1.0346258	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	N-acyltransferase	1.513294	3.226635	1.0262213	1499	NMD protein affecting ribosome stability and mRNA decay	J	conserved hypothetical protein	 3.889664e-02	 7	1.186489e-02	-2.910889e-03	-9.181921e-03	-2.160856e-01	9.085616e-01		14	 7	FALSE	 TRUE	108	 TRUE	0.4469764	0.2421805	0.5480306	0.4469764	0.7596462	0.7986660	0.4601321	0.4456325	U	0.4686274	0.5389023
13773	129	183134	183135	1	  54	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.513294	3.226635	1.0262213	1499	NMD protein affecting ribosome stability and mRNA decay	J	conserved hypothetical protein	1.439142	3.086956	1.0725699	-	-	-	paREP2b	 0.000000e+00	 0	5.498632e-03	-7.583638e-04	 2.520914e-03	-1.160790e-02	3.620289e-01		 7	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181422	0.5204865	U	0.4686274	0.6162291
13773	129	183135	183136	1	 128	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.439142	3.086956	1.0725699	-	-	-	paREP2b	1.445380	3.125551	1.0271900	-	-	-	paREP2b	 0.000000e+00	 0	3.891381e-05	 7.366607e-05	 2.130968e-02	-7.350650e-04	3.225333e-03		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199871	0.6482245	U	0.4686274	0.6162291
13773	129	183136	183137	1	 101	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.445380	3.125551	1.0271900	-	-	-	paREP2b	1.392735	2.845533	0.9146989	-	-	-	paREP2a	 0.000000e+00	 0	2.771428e-03	 3.527076e-04	 3.350748e-02	-1.752847e-02	2.628234e-01		 0	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5160470	0.5561071	U	0.4686274	0.6162291
13773	129	183137	183138	1	  86	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.392735	2.845533	0.9146989	-	-	-	paREP2a	1.457590	3.075389	1.0465259	270	Site-specific DNA methylase	L	C-5 cytosine-specific DNA methylase	 0.000000e+00	 0	4.206076e-03	-3.634939e-04	 7.847483e-03	-7.157460e-02	3.921855e-01		 0	16	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5010179	0.5135141	U	0.4686274	0.6162291
13773	129	183138	183139	1	 249	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.457590	3.075389	1.0465259	270	Site-specific DNA methylase	L	C-5 cytosine-specific DNA methylase	1.450697	3.158206	1.0254788	-	-	-	hypothetical protein	 0.000000e+00	 0	4.751447e-05	-4.314120e-06	 2.059096e-02	 1.350682e-02	3.675914e-03		16	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183599	0.6475832	U	0.4686274	0.6162291
13773	129	183139	183140	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.450697	3.158206	1.0254788	-	-	-	hypothetical protein	1.478875	3.057307	1.0179630	-	-	-	hypothetical protein	 0.000000e+00	 0	7.940322e-04	-1.913253e-05	 2.243080e-02	 3.204424e-02	7.132958e-02		 0	 0	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174190	0.6173892	U	0.4686274	0.6162291
13773	129	183140	183141	1	  53	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.478875	3.057307	1.0179630	-	-	-	hypothetical protein	1.558655	3.259558	1.1154707	-	-	-	paREP2b	 0.000000e+00	 0	6.364765e-03	 2.947814e-03	 8.250365e-02	 2.747040e-01	1.704809e-01		 0	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5823368	0.5875676	U	0.4686274	0.6162291
13773	129	183141	183142	1	  98	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.558655	3.259558	1.1154707	-	-	-	paREP2b	1.384430	2.960673	1.0565433	-	-	-	paREP2a	 0.000000e+00	 0	3.035425e-02	-7.182559e-03	-8.107292e-02	-4.241667e-01	1.744508e+00		 0	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4145867	0.4116236	U	0.4686274	0.6162291
13773	129	183142	183143	1	  13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.384430	2.960673	1.0565433	-	-	-	paREP2a	1.519337	3.278958	1.0930615	-	-	-	paREP2a	 0.000000e+00	 0	1.820001e-02	-4.549761e-03	-3.212305e-02	-3.400100e-01	1.364396e+00		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4300363	0.4215157	U	0.4686274	0.6162291
13773	129	183143	183144	1	  14	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.519337	3.278958	1.0930615	-	-	-	paREP2a	1.450647	3.134390	1.0993020	72	Phenylalanyl-tRNA synthetase beta subunit	J	phenylalanyl-tRNA synthetase beta subunit	 0.000000e+00	 0	4.718432e-03	-5.070477e-05	 8.422694e-03	 5.493197e-02	2.787970e-01		 0	14	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187498	0.5513597	U	0.4686274	0.6162291
13773	129	183144	183145	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.450647	3.134390	1.0993020	72	Phenylalanyl-tRNA synthetase beta subunit	J	phenylalanyl-tRNA synthetase beta subunit	1.377312	3.081946	1.0727553	-	-	-	hypothetical protein	 0.000000e+00	 0	5.377916e-03	 5.528383e-05	 3.531931e-02	-5.404377e-02	4.845357e-01		14	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5054939	0.4953921	U	0.4686274	0.6162291
13773	129	183145	183146	1	 202	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.377312	3.081946	1.0727553	-	-	-	hypothetical protein	1.479178	3.109151	1.0582535	-	-	-	paREP2b	 0.000000e+00	 0	1.037670e-02	-2.058368e-03	-1.530537e-02	-2.175728e-01	9.321213e-01		 0	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4598317	0.4446379	U	0.4686274	0.6162291
13773	129	183146	183147	1	 146	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.479178	3.109151	1.0582535	-	-	-	paREP2b	1.545728	3.048947	1.1444039	-	-	-	paREP2a	 0.000000e+00	 0	4.428870e-03	 2.621158e-03	 7.202388e-02	 2.613074e-01	1.374059e-01		 0	 0	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5744620	0.5963968	U	0.4686274	0.6162291
13773	129	183147	183148	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.545728	3.048947	1.1444039	-	-	-	paREP2a	1.446163	2.994457	0.9756445	-	-	-	paREP2a	 0.000000e+00	 0	9.913305e-03	-4.933997e-04	-7.561279e-03	 3.077496e-02	4.717992e-01		 0	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173910	0.4985726	U	0.4686274	0.6162291
13773	129	183148	183149	1	 126	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.446163	2.994457	0.9756445	-	-	-	paREP2a	1.620192	3.568533	1.0900456	-	-	-	hypothetical protein	 0.000000e+00	 0	3.028621e-02	-8.828657e-04	 8.270405e-02	 3.783700e-02	7.296280e-01		 0	 0	 TRUE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179306	0.4617333	U	0.4686274	0.6162291
13773	129	183149	183150	1	 182	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.620192	3.568533	1.0900456	-	-	-	hypothetical protein	1.446741	3.067687	1.0365488	-	-	-	hypothetical protein	 0.000000e+00	 0	3.008537e-02	-7.853035e-04	-6.074787e-02	 4.678029e-02	7.126832e-01		 0	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186507	0.4634542	U	0.4686274	0.6162291
13773	129	183150	183151	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.446741	3.067687	1.0365488	-	-	-	hypothetical protein	1.422980	3.089350	1.0153016	2606	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	5.645782e-04	 1.321864e-04	 2.427845e-02	-1.009301e-02	6.031303e-02		 0	 9	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186303	0.6204913	U	0.4686274	0.6162291
13773	129	183151	183152	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.13353139	1.422980	3.089350	1.0153016	2606	Uncharacterized conserved protein	S	conserved hypothetical protein	1.391851	2.901656	1.0248625	1371	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.445005e-03	 9	9.689946e-04	 1.691771e-03	 4.747133e-02	 9.380560e-02	8.505079e-02		 9	12	FALSE	 TRUE	106	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.7702221	0.4814074	0.5179779	0.6126404	U	0.4686274	0.5517368
13773	129	183152	183153	1	  46	Divergent	-	+	 0.000000	0	  0.000000	 -0.13150953	1.391851	2.901656	1.0248625	1371	Uncharacterized conserved protein	S	conserved hypothetical protein	1.468918	3.246681	1.0862841	269	3-hexulose-6-phosphate synthase and related proteins	G	D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural	 1.474155e-03	12	5.939250e-03	-1.043453e-03	 3.141279e-04	-1.258186e-01	5.541848e-01		12	16	FALSE	 TRUE	105	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7776747	0.4825226	0.4833109	0.4831606	U	0.4686274	0.5537552
13773	129	183153	183154	1	  12	Same	+	+	 0.000000	0	  0.000000	 -0.13150953	1.468918	3.246681	1.0862841	269	3-hexulose-6-phosphate synthase and related proteins	G	D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural	1.472303	3.056318	1.0099632	2019	Archaeal adenylate kinase	F	adenylate kinase	 6.289505e-03	 5	1.146417e-05	 3.664516e-04	 2.535283e-02	 7.385872e-02	6.414149e-04	0	16	 5	 TRUE	 TRUE	106	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.7448207	0.5613206	0.5179207	0.6527891	N	0.5492530	0.5624819
13773	129	183154	183155	1	 206	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.472303	3.056318	1.0099632	2019	Archaeal adenylate kinase	F	adenylate kinase	1.379918	3.014306	1.0443015	693	Putative intracellular protease/amidase	R	hypothetical protein	 0.000000e+00	 0	8.535130e-03	-1.494588e-03	 1.512575e-02	-1.662914e-01	7.547516e-01		 5	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4730313	0.4590531	U	0.4686274	0.6162291
13773	129	183155	183156	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.379918	3.014306	1.0443015	693	Putative intracellular protease/amidase	R	hypothetical protein	1.489607	3.385091	1.1652723	371	Glycerol dehydrogenase and related enzymes	C	glycerol dehydrogenase (gldA)	 0.000000e+00	 0	1.203179e-02	-2.731376e-03	-2.046339e-02	-2.577292e-01	1.051294e+00		 0	22	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4510138	0.4359569	U	0.4686274	0.6162291
13773	129	183156	183157	1	 546	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.489607	3.385091	1.1652723	371	Glycerol dehydrogenase and related enzymes	C	glycerol dehydrogenase (gldA)	1.402809	2.960775	0.9790061	-	-	-	hypothetical protein	 0.000000e+00	 0	7.533899e-03	-1.856594e-03	 1.315544e-03	-1.723839e-01	6.921014e-01		22	 0	 TRUE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4723720	0.4654364	U	0.4686274	0.6162291
13773	129	183157	183158	1	  42	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.402809	2.960775	0.9790061	-	-	-	hypothetical protein	1.440337	3.061804	1.0513678	281	Malic enzyme	C	malate oxidoreductase (mae)	 0.000000e+00	 0	1.408343e-03	 5.371325e-04	 2.133420e-02	 2.698183e-03	1.472486e-01		 0	34	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197433	0.5937974	U	0.4686274	0.6162291
13773	129	183158	183159	1	   5	Convergent	+	-	 0.000000	0	  0.000000	 -4.26782265	1.440337	3.061804	1.0513678	281	Malic enzyme	C	malate oxidoreductase (mae)	1.411544	3.000134	1.0372611	372	Citrate synthase	C	citrate synthase	 4.401145e-02	34	8.290458e-04	 4.405628e-04	 2.961106e-02	 2.067370e-03	8.549902e-02	C	34	50	 TRUE	 TRUE	109	FALSE	0.4469764	0.1841525	0.5480306	0.4469764	0.7748967	0.8224763	0.5198060	0.6125263	Y	1.4497162	0.6254113
13773	129	183159	183160	1	 128	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.411544	3.000134	1.0372611	372	Citrate synthase	C	citrate synthase	1.419591	3.186390	1.0767873	-	-	-	conserved hypothetical protein	 5.342190e-03	 1	6.476121e-05	 1.267258e-03	 3.409054e-02	 6.638556e-02	6.008332e-03		50	 1	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5472932	0.5182294	0.6454790	U	0.4686274	0.6162291
13773	129	183160	183161	1	  39	Divergent	-	+	 0.000000	0	  0.000000	 -0.12505431	1.419591	3.186390	1.0767873	-	-	-	conserved hypothetical protein	1.435666	3.039781	1.0640687	1224	DNA helicase TIP49, TBP-interacting protein	K	TBP-interacting protein TIP49	 3.505284e-02	 1	2.583952e-04	 5.001383e-04	 2.464525e-02	 1.225580e-02	2.773516e-02		 1	 6	FALSE	 TRUE	107	FALSE	0.4469764	0.2924948	0.5480306	0.4469764	0.6329203	0.7716100	0.5186177	0.6341446	U	0.4686274	0.5547868
13773	129	183161	183162	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.435666	3.039781	1.0640687	1224	DNA helicase TIP49, TBP-interacting protein	K	TBP-interacting protein TIP49	1.465010	3.401674	1.0887309	-	-	-	hypothetical protein	 0.000000e+00	 0	8.610879e-04	-2.141596e-04	 1.807648e-02	-1.217098e-02	7.591019e-02		 6	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178065	0.6161199	U	0.4686274	0.6162291
13773	129	183162	183163	1	   2	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.465010	3.401674	1.0887309	-	-	-	hypothetical protein	1.529945	3.305609	1.0731580	-	-	-	paREP2b	 0.000000e+00	 0	4.216568e-03	 1.069685e-03	 4.844388e-02	 1.492636e-01	2.092202e-01		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5302680	0.5762640	U	0.4686274	0.6162291
13773	129	183163	183164	1	 -22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.529945	3.305609	1.0731580	-	-	-	paREP2b	1.425116	3.130633	1.0330164	-	-	-	paREP2b	 0.000000e+00	 0	1.098920e-02	-2.064111e-03	-1.731306e-02	-1.159783e-01	7.204792e-01		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4863984	0.4629446	U	0.4686274	0.6162291
13773	129	183164	183165	1	  72	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.425116	3.130633	1.0330164	-	-	-	paREP2b	1.515671	3.196324	1.0075708	-	-	-	paREP2a	 0.000000e+00	 0	8.200250e-03	-1.689032e-03	 9.728125e-03	-1.023183e-01	5.913527e-01		 0	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4901164	0.4778085	U	0.4686274	0.6162291
13773	129	183165	183166	1	 165	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.515671	3.196324	1.0075708	-	-	-	paREP2a	1.456376	3.314142	1.1451607	750	Predicted membrane-associated Zn-dependent proteases 1	M	conserved hypothetical protein	 0.000000e+00	 0	3.515893e-03	 3.203284e-04	 1.405360e-02	 8.625941e-02	2.057246e-01		 0	 0	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176869	0.5778836	U	0.4686274	0.6162291
13773	129	183166	183167	1	  39	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.456376	3.314142	1.1451607	750	Predicted membrane-associated Zn-dependent proteases 1	M	conserved hypothetical protein	1.474235	3.192644	1.0574795	-	-	-	hypothetical protein	 0.000000e+00	 0	3.189245e-04	 1.138316e-04	 2.333057e-02	 4.418165e-02	2.622262e-02		 0	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184658	0.6348800	U	0.4686274	0.6162291
13773	129	183167	183168	1	 255	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.474235	3.192644	1.0574795	-	-	-	hypothetical protein	1.250073	2.757908	1.0916697	-	-	-	hypothetical protein containing C2H2 zinc finger motifs, degenerate	 0.000000e+00	 0	5.024861e-02	-4.598536e-03	 6.857109e-02	-3.029263e-01	1.678248e+00		 0	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4396594	0.4125702	U	0.4686274	0.6162291
13773	129	183168	183169	1	 141	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.250073	2.757908	1.0916697	-	-	-	hypothetical protein containing C2H2 zinc finger motifs, degenerate	1.520102	3.218596	1.1019734	-	-	-	paREP2b	 0.000000e+00	 0	7.291568e-02	-1.383249e-02	-2.319326e-01	-6.142040e-01	2.592520e+00		 0	 0	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3928823	0.4028286	U	0.4686274	0.6162291
13773	129	183169	183170	1	   0	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.520102	3.218596	1.1019734	-	-	-	paREP2b	1.397485	2.853156	1.1505392	-	-	-	paREP2a	 0.000000e+00	 0	1.503484e-02	-3.703942e-03	-2.717872e-02	-2.770827e-01	1.138815e+00		 0	 0	FALSE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4455922	0.4311406	U	0.4686274	0.6162291
13773	129	183170	183171	1	  13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.397485	2.853156	1.1505392	-	-	-	paREP2a	1.309091	2.603651	1.0216741	-	-	-	paREP2a	 0.000000e+00	 0	7.813550e-03	 7.671180e-03	 1.544761e-01	 4.130553e-01	2.297080e-01		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6403349	0.5710473	U	0.4686274	0.6162291
13773	129	183171	183172	1	 -46	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.309091	2.603651	1.0216741	-	-	-	paREP2a	1.615891	3.578015	1.1002276	-	-	-	paREP2a	 0.000000e+00	 0	9.412651e-02	-2.340846e-02	-2.356669e-01	-8.239796e-01	3.297165e+00		 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3812910	0.3999544	U	0.4686274	0.6162291
13773	129	183172	183173	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.615891	3.578015	1.1002276	-	-	-	paREP2a	1.502789	3.465189	1.0943058	4920	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.279202e-02	 8.454660e-03	 5.758191e-02	 4.659653e-01	1.345758e-01		 0	 2	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6624433	0.5971986	U	0.4686274	0.6162291
13773	129	183173	183174	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.502789	3.465189	1.0943058	4920	Predicted membrane protein	S	conserved hypothetical protein	1.391136	2.971396	1.0262325	2058	Ribosomal protein L12E/L44/L45/RPP1/RPP2	J	ribosomal protein L12	 0.000000e+00	 0	1.246646e-02	-3.096989e-03	-1.296095e-02	-2.582894e-01	1.034053e+00		 2	 0	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4508488	0.4366685	U	0.4686274	0.6162291
13773	129	183174	183175	1	  44	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.391136	2.971396	1.0262325	2058	Ribosomal protein L12E/L44/L45/RPP1/RPP2	J	ribosomal protein L12	1.388107	3.074229	1.0528057	-	-	-	ribosomal protein L38	 0.000000e+00	 0	9.174978e-06	 3.813388e-03	 6.627521e-02	 2.548808e-01	5.300950e-04		 0	 1	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5718390	0.6531640	U	0.4686274	0.6162291
13773	129	183175	183176	1	 144	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.388107	3.074229	1.0528057	-	-	-	ribosomal protein L38	1.229171	2.833892	0.8804654	2096	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	2.526085e-02	 1.406350e-02	 3.004091e-01	 5.145184e-01	2.300759e-01		 1	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6796692	0.5708723	U	0.4686274	0.6162291
13773	129	183176	183177	1	 112	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.229171	2.833892	0.8804654	2096	Uncharacterized conserved protein	S	conserved hypothetical protein	1.521323	3.268754	1.1064235	2513	PEP phosphonomutase and related enzymes	G	carboxyphosphonoenolpyruvate phosphonomutase (prpB)	 0.000000e+00	 0	8.535295e-02	-1.553999e-02	-2.739496e-01	-6.284311e-01	2.647176e+00		 0	21	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3917124	0.4025539	U	0.4686274	0.6162291
13773	129	183177	183178	1	  -7	Same	+	+	18.212026	0	 41.704659	 40.79703583	1.521323	3.268754	1.1064235	2513	PEP phosphonomutase and related enzymes	G	carboxyphosphonoenolpyruvate phosphonomutase (prpB)	1.349814	2.902727	1.0204621	2079	Uncharacterized protein involved in propionate catabolism	R	propionate catabolism protein prpD	 2.292201e-01	18	2.941534e-02	-7.103419e-03	-4.853273e-02	-4.909315e-01	1.985439e+00		21	18	 TRUE	 TRUE	104	 TRUE	2.4834224	2.0173004	0.5480306	2.2468137	0.7781393	1.1572856	0.4061864	0.4081529	U	0.4686274	0.8970770
13773	129	183178	183179	1	  81	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.349814	2.902727	1.0204621	2079	Uncharacterized protein involved in propionate catabolism	R	propionate catabolism protein prpD	1.411358	2.805520	1.1154238	-	-	-	hypothetical protein	 0.000000e+00	 0	3.787753e-03	 4.066653e-03	 4.615289e-02	 2.341182e-01	2.278725e-01		18	 0	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5630735	0.5715668	U	0.4686274	0.6162291
13773	129	183179	183180	1	 435	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.411358	2.805520	1.1154238	-	-	-	hypothetical protein	1.481355	3.279863	1.1353706	-	-	-	P. aerophilum family 66 protein	 0.000000e+00	 0	4.899530e-03	-1.199521e-03	 4.922175e-03	-1.133649e-01	4.592325e-01		 0	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4874524	0.5023186	U	0.4686274	0.6162291
13773	129	183180	183181	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.481355	3.279863	1.1353706	-	-	-	P. aerophilum family 66 protein	1.431463	3.770927	1.2165506	-	-	-	P. aerophilum family 550 protein	 0.000000e+00	 0	2.489241e-03	-5.971485e-04	 1.248455e-02	-3.672792e-02	2.249511e-01		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5099585	0.5726631	U	0.4686274	0.6162291
13773	129	183181	183182	1	 393	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.431463	3.770927	1.2165506	-	-	-	P. aerophilum family 550 protein	1.625192	3.630217	1.1619830	-	-	-	hypothetical protein	 0.000000e+00	 0	3.753101e-02	-3.463819e-03	 5.593788e-02	-8.819190e-02	1.004610e+00		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4958495	0.4390044	U	0.4686274	0.6162291
13773	129	183182	183183	1	  -9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.625192	3.630217	1.1619830	-	-	-	hypothetical protein	1.486705	3.294128	1.1109944	-	-	-	hypothetical protein	 0.000000e+00	 0	1.917874e-02	 6.137179e-03	 1.895305e-02	 3.819334e-01	2.330303e-01		 0	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6258790	0.5695312	U	0.4686274	0.6162291
13773	129	183183	183184	1	 355	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.486705	3.294128	1.1109944	-	-	-	hypothetical protein	1.528329	3.403955	1.0545389	-	-	-	conserved within P. aerophilum, authentic frameshift	 0.000000e+00	 0	1.732594e-03	 2.716767e-03	 6.436816e-02	 2.821578e-01	6.069057e-02		 0	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5852237	0.6202452	U	0.4686274	0.6162291
13773	129	183184	183185	1	 361	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.528329	3.403955	1.0545389	-	-	-	conserved within P. aerophilum, authentic frameshift	1.347290	2.874330	1.0218892	492	Thioredoxin reductase	O	thioredoxin reductase (trxB)	 0.000000e+00	 0	3.277521e-02	-8.009297e-03	-6.041938e-02	-5.325087e-01	2.146461e+00		 0	17	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4002874	0.4067434	U	0.4686274	0.6162291
13773	129	183185	183186	1	  20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.347290	2.874330	1.0218892	492	Thioredoxin reductase	O	thioredoxin reductase (trxB)	1.440747	3.185132	1.1020370	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	8.734167e-03	 1.108297e-03	 6.462313e-03	 3.056881e-03	6.285094e-01		17	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197298	0.4734023	U	0.4686274	0.6162291
13773	129	183186	183187	1	   4	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.440747	3.185132	1.1020370	-	-	-	conserved within P. aerophilum	1.497607	3.255431	1.0733271	-	-	-	protease, conjectural	 0.000000e+00	 0	3.233106e-03	-4.920045e-04	 2.012098e-02	-1.884782e-03	2.450364e-01		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199564	0.5644275	U	0.4686274	0.6162291
13773	129	183187	183188	1	 116	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.497607	3.255431	1.0733271	-	-	-	protease, conjectural	1.396632	3.079775	1.0801974	185	Ribosomal protein S19	J	ribosomal protein S19	 0.000000e+00	 0	1.019598e-02	-2.530733e-03	-6.660760e-03	-2.231582e-01	8.939898e-01		 0	12	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4587726	0.4470060	U	0.4686274	0.6162291
13773	129	183188	183189	1	   2	Same	+	+	 0.000000	0	  0.000000	 -0.01801851	1.396632	3.079775	1.0801974	185	Ribosomal protein S19	J	ribosomal protein S19	1.382895	2.909552	1.0171432	186	Ribosomal protein S17	J	ribosomal protein S17	 2.507089e-02	 1	1.886935e-04	 3.750982e-03	 6.889499e-02	 2.552372e-01	1.154429e-02	J	12	 1	 TRUE	 TRUE	109	 TRUE	0.4469764	0.3087842	0.5480306	0.4469764	0.6329203	0.7074534	0.5722705	0.6421803	Y	1.4497162	0.6618114
13773	129	183189	183190	1	  12	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.382895	2.909552	1.0171432	186	Ribosomal protein S17	J	ribosomal protein S17	1.396673	2.878209	1.0506675	-	-	-	paREP2a	 0.000000e+00	 0	1.898314e-04	 3.748149e-03	 6.025084e-02	 2.548060e-01	1.170980e-02		 1	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5716240	0.6420996	U	0.4686274	0.6162291
13773	129	183190	183191	1	  13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.396673	2.878209	1.0506675	-	-	-	paREP2a	1.397485	2.853156	1.1505392	-	-	-	paREP2a	 0.000000e+00	 0	6.590126e-07	 2.949806e-03	 5.500371e-02	 2.024176e-01	5.315674e-05		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5502992	0.6554796	U	0.4686274	0.6162291
13773	129	183191	183192	1	   0	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.397485	2.853156	1.1505392	-	-	-	paREP2a	1.469938	3.112077	1.0631428	-	-	-	paREP2b	 0.000000e+00	 0	5.249438e-03	-9.997336e-04	 2.542006e-03	-1.205601e-01	5.132628e-01		 0	 0	FALSE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4849817	0.4910513	U	0.4686274	0.6162291
13773	129	183192	183193	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.469938	3.112077	1.0631428	-	-	-	paREP2b	1.441607	3.251895	1.0541867	1948	ERCC4-type nuclease	L	conserved hypothetical protein	 0.000000e+00	 0	8.026595e-04	-1.814836e-04	 1.798552e-02	 1.036630e-03	7.092023e-02		 0	 3	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198891	0.6175203	U	0.4686274	0.6162291
13773	129	183193	183194	1	  56	Convergent	+	-	 0.000000	0	  0.000000	 -0.13150953	1.441607	3.251895	1.0541867	1948	ERCC4-type nuclease	L	conserved hypothetical protein	1.441300	3.121957	1.0637401	2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	G	beta-glucosidase	 4.761494e-02	 3	9.433595e-08	 9.877100e-05	 2.190805e-02	-2.944972e-06	2.120380e-05	0	 3	 6	 TRUE	 TRUE	110	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7136133	0.8358229	0.5199640	0.6555893	N	0.5492530	0.5624819
13773	129	183194	183195	1	 140	Same	-	-	 0.000000	0	  0.000000	 -0.13150953	1.441300	3.121957	1.0637401	2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	G	beta-glucosidase	1.404148	3.142602	1.0553345	589	Universal stress protein UspA and related nucleotide-binding proteins	T	conserved hypothetical protein	 7.264158e-02	 2	1.380260e-03	 4.768490e-04	 3.172284e-02	 2.862513e-04	1.385462e-01	0	 6	 2	FALSE	 TRUE	109	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.9255497	0.5199359	0.5961785	N	0.5492530	0.5624819
13773	129	183195	183196	1	  -7	Same	-	-	 2.856470	0	  5.519058	  5.51905803	1.404148	3.142602	1.0553345	589	Universal stress protein UspA and related nucleotide-binding proteins	T	conserved hypothetical protein	1.413744	2.959651	1.0095900	57	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	G	glyceraldehyde-3-phosphate dehydrogenase	 5.118686e-02	 2	9.208016e-05	 1.778731e-03	 3.946636e-02	 1.019055e-01	9.954005e-03	0	 2	12	FALSE	 TRUE	108	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.6838149	0.8456214	0.5190107	0.6428219	N	0.5492530	0.8654777
13773	129	183196	183197	1	  -3	Same	-	-	 4.935912	0	  7.598500	  6.74458605	1.413744	2.959651	1.0095900	57	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	G	glyceraldehyde-3-phosphate dehydrogenase	1.425031	3.117098	1.0671041	126	3-phosphoglycerate kinase	G	phosphoglycerate kinase	 1.241971e-02	12	1.274080e-04	 9.924914e-04	 3.050733e-02	 4.738813e-02	9.954005e-03	G	12	69	FALSE	 TRUE	107	 TRUE	2.8363652	1.8091830	0.5480306	2.8096798	0.7776747	0.6196637	0.5186936	0.6428219	Y	1.4497162	0.9077802
13773	129	183197	183198	1	  88	Divergent	-	+	 0.000000	0	  0.000000	 -0.26504093	1.425031	3.117098	1.0671041	126	3-phosphoglycerate kinase	G	phosphoglycerate kinase	1.361549	2.840454	1.0042868	4914	Predicted nucleotidyltransferase	R	conserved hypothetical protein	 2.897430e-03	 3	4.030044e-03	 2.368438e-03	 6.716423e-02	 1.237948e-01	2.919151e-01		69	 3	FALSE	 TRUE	106	FALSE	0.4469764	0.2605979	0.5480306	0.4469764	0.7136133	0.5139075	0.5227417	0.5460473	U	0.4686274	0.5447277
13773	129	183198	183199	1	  84	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.361549	2.840454	1.0042868	4914	Predicted nucleotidyltransferase	R	conserved hypothetical protein	1.419111	2.987602	1.0608596	441	Threonyl-tRNA synthetase	J	threonyl-tRNA synthetase	 4.116993e-03	 3	3.313467e-03	 2.900308e-03	 3.679644e-02	 1.637817e-01	2.345146e-01		 3	 7	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5373524	0.5359487	0.5687032	U	0.4686274	0.6162291
13773	129	183199	183200	1	  62	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.419111	2.987602	1.0608596	441	Threonyl-tRNA synthetase	J	threonyl-tRNA synthetase	1.499984	3.164379	0.9939917	1586	S-adenosylmethionine decarboxylase	E	conserved hypothetical protein	 5.530165e-03	 4	6.540312e-03	-1.568581e-03	 5.746908e-03	-1.167605e-01	5.450813e-01	0	 7	 4	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.5496449	0.4859277	0.4841397	N	0.5492530	0.6245624
13773	129	183200	183201	1	 159	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.499984	3.164379	0.9939917	1586	S-adenosylmethionine decarboxylase	E	conserved hypothetical protein	1.525072	3.334262	1.1159301	-	-	-	hypothetical protein	 0.000000e+00	 0	6.294434e-04	 3.580132e-03	 7.038779e-02	 3.295848e-01	1.929605e-02		 4	 0	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6036756	0.6380078	U	0.4686274	0.6162291
13773	129	183201	183202	1	 526	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.525072	3.334262	1.1159301	-	-	-	hypothetical protein	1.559429	3.874599	1.1940270	-	-	-	P. aerophilum family 550 protein	 0.000000e+00	 0	1.180409e-03	 7.960062e-03	 1.296637e-01	 5.015853e-01	1.603537e-02		 0	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6732068	0.6397376	U	0.4686274	0.6162291
13773	129	183202	183203	1	   8	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.559429	3.874599	1.1940270	-	-	-	P. aerophilum family 550 protein	1.494215	3.332750	1.1460650	-	-	-	P. aerophilum family 66 protein	 0.000000e+00	 0	4.252943e-03	 4.626325e-03	 4.984587e-02	 3.607373e-01	9.518385e-02		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6158891	0.6086719	U	0.4686274	0.6162291
13773	129	183203	183204	1	 253	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.494215	3.332750	1.1460650	-	-	-	P. aerophilum family 66 protein	1.428247	2.885688	0.9472884	1763	Molybdopterin-guanine dinucleotide biosynthesis protein	H	molybdopterin-guanine dinucleotide biosynthesis protein B, conjectural	 0.000000e+00	 0	4.351690e-03	-9.911321e-04	 5.852809e-03	-6.328097e-02	3.620289e-01		 0	 3	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5029481	0.5204865	U	0.4686274	0.6162291
13773	129	183204	183205	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.428247	2.885688	0.9472884	1763	Molybdopterin-guanine dinucleotide biosynthesis protein	H	molybdopterin-guanine dinucleotide biosynthesis protein B, conjectural	1.356451	3.049854	1.0422265	1695	Predicted transcriptional regulators	K	conserved hypothetical protein	 0.000000e+00	 0	5.154680e-03	 2.197466e-03	 6.796151e-02	 1.010202e-01	3.694550e-01	0	 3	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5188426	0.5185356	N	0.5492530	0.6245624
13773	129	183205	183206	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.356451	3.049854	1.0422265	1695	Predicted transcriptional regulators	K	conserved hypothetical protein	1.377329	2.969532	1.0448032	1260	Myo-inositol-1-phosphate synthase	I	myo-inositol-1-phosphate synthase, conjectural	 0.000000e+00	 0	4.358846e-04	 7.031724e-03	 9.399400e-02	 4.508811e-01	1.887197e-02	0	 0	15	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6563953	0.6382319	N	0.5492530	0.6245624
13773	129	183206	183207	1	  58	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.377329	2.969532	1.0448032	1260	Myo-inositol-1-phosphate synthase	I	myo-inositol-1-phosphate synthase, conjectural	1.409955	3.058969	1.0702515	247	Fe-S oxidoreductase	C	iron-sulfur binding reductase, probable	 0.000000e+00	 0	1.064425e-03	 3.069065e-03	 4.705241e-02	 1.907753e-01	8.505079e-02	0	15	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5463187	0.6126404	N	0.5492530	0.6245624
13773	129	183207	183208	1	 200	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.409955	3.058969	1.0702515	247	Fe-S oxidoreductase	C	iron-sulfur binding reductase, probable	1.418238	3.029034	1.0412114	1468	RecB family exonuclease	L	conserved hypothetical protein	 0.000000e+00	 0	6.861188e-05	 1.373881e-03	 3.523240e-02	 7.365375e-02	6.493663e-03	0	 0	 4	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179430	0.6450314	N	0.5492530	0.6245624
13773	129	183208	183209	1	 -19	Same	-	-	 0.000000	0	  0.000000	 -0.10001087	1.418238	3.029034	1.0412114	1468	RecB family exonuclease	L	conserved hypothetical protein	1.435345	3.229831	1.1299722	5258	GTPase	R	GTP-binding protein	 4.247656e-02	 4	2.926443e-04	 5.320741e-04	 2.482132e-02	 1.347325e-02	3.115780e-02		 4	 5	FALSE	 TRUE	103	 TRUE	0.4469764	0.2961221	0.5480306	0.4469764	0.7323301	0.8166262	0.5184023	0.6322033	U	0.4686274	0.5559281
13773	129	183209	183210	1	 207	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.435345	3.229831	1.1299722	5258	GTPase	R	GTP-binding protein	1.464531	3.670289	1.2207221	-	-	-	hypothetical protein	 0.000000e+00	 0	8.518646e-04	-2.108499e-04	 1.805672e-02	-1.250141e-02	7.548788e-02		 5	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176262	0.6162896	U	0.4686274	0.6162291
13773	129	183210	183211	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.464531	3.670289	1.2207221	-	-	-	hypothetical protein	1.480549	3.275692	1.1263432	-	-	-	paREP2a	 0.000000e+00	 0	2.565614e-04	 3.830715e-04	 2.693708e-02	 8.000900e-02	2.285828e-02		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177633	0.6363673	U	0.4686274	0.6162291
13773	129	183211	183212	1	 -27	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.480549	3.275692	1.1263432	-	-	-	paREP2a	1.621306	3.578548	1.0859136	-	-	-	paREP2a	 0.000000e+00	 0	1.981246e-02	 4.954006e-03	 1.498191e-01	 3.310620e-01	2.812336e-01		 0	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6042041	0.5506717	U	0.4686274	0.6162291
13773	129	183212	183213	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.621306	3.578548	1.0859136	-	-	-	paREP2a	1.369367	2.788862	0.9714794	-	-	-	paREP2a	 0.000000e+00	 0	6.347299e-02	-1.393720e-02	-1.984503e-01	-5.952218e-01	2.436762e+00		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3945146	0.4038977	U	0.4686274	0.6162291
13773	129	183213	183214	1	 161	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.369367	2.788862	0.9714794	-	-	-	paREP2a	1.474356	3.217678	1.1034773	-	-	-	paREP2b	 0.000000e+00	 0	1.102274e-02	-1.883606e-03	-1.703311e-02	-2.043375e-01	9.425236e-01		 0	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4630860	0.4432769	U	0.4686274	0.6162291
13773	129	183214	183215	1	 -14	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.474356	3.217678	1.1034773	-	-	-	paREP2b	1.500976	3.527819	1.2180493	3808	Inorganic pyrophosphatase	C	vacuolar-type H+-pyrophosphatase	 0.000000e+00	 0	7.086041e-04	 1.138612e-03	 3.895489e-02	 1.579294e-01	4.136213e-02		 0	20	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5337558	0.6275054	U	0.4686274	0.6162291
13773	129	183215	183216	1	  99	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.500976	3.527819	1.2180493	3808	Inorganic pyrophosphatase	C	vacuolar-type H+-pyrophosphatase	1.508446	3.243134	1.1051663	-	-	-	paREP2a	 0.000000e+00	 0	5.580178e-05	 2.828890e-03	 5.583679e-02	 2.856087e-01	2.120380e-03		20	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5866818	0.6501030	U	0.4686274	0.6162291
13773	129	183216	183217	1	 104	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.508446	3.243134	1.1051663	-	-	-	paREP2a	1.382426	3.110270	1.1028439	1269	Archaeal/vacuolar-type H+-ATPase subunit I	C	H+-transporting ATP synthase subunit I (atpI), conjectural	 0.000000e+00	 0	1.588108e-02	-3.934788e-03	-2.145627e-02	-3.160108e-01	1.264115e+00		 0	 1	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4358975	0.4257281	U	0.4686274	0.6162291
13773	129	183217	183218	1	   0	Same	+	+	 0.000000	0	  0.000000	 -0.07232066	1.382426	3.110270	1.1028439	1269	Archaeal/vacuolar-type H+-ATPase subunit I	C	H+-transporting ATP synthase subunit I (atpI), conjectural	1.410175	3.233160	1.0941575	685	5,10-methylenetetrahydrofolate reductase	E	conserved hypothetical protein	 4.578021e-02	 1	7.700140e-04	 2.842657e-03	 4.621021e-02	 1.773486e-01	6.414149e-02	0	 1	 3	 TRUE	 TRUE	100	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.8313457	0.5410568	0.6193126	N	0.5492530	0.5660839
13773	129	183218	183219	1	  40	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.410175	3.233160	1.0941575	685	5,10-methylenetetrahydrofolate reductase	E	conserved hypothetical protein	1.406889	3.154444	1.0793532	1192	ATPases involved in chromosome partitioning	D	conserved hypothetical protein	 5.631536e-04	 1	1.080102e-05	 1.834362e-03	 4.290101e-02	 1.064572e-01	7.215181e-04	0	 3	 1	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.5195448	0.6523872	N	0.5492530	0.6245624
13773	129	183219	183220	1	 -46	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.406889	3.154444	1.0793532	1192	ATPases involved in chromosome partitioning	D	conserved hypothetical protein	1.452413	3.284988	1.0943351	-	-	-	hypothetical protein	 0.000000e+00	 0	2.072448e-03	-4.539153e-05	 1.517979e-02	-3.652943e-02	2.001927e-01		 1	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5102237	0.5800294	U	0.4686274	0.6162291
13773	129	183220	183221	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.452413	3.284988	1.0943351	-	-	-	hypothetical protein	1.407706	3.016095	1.0349985	-	-	-	conserved protein	 0.000000e+00	 0	1.998739e-03	-4.455834e-05	 2.506092e-02	-3.570484e-02	1.933839e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5104883	0.5820196	U	0.4686274	0.6162291
13773	129	183221	183222	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.407706	3.016095	1.0349985	-	-	-	conserved protein	1.514443	3.366660	1.0815500	255	Ribosomal protein L29	J	ribosomal protein L29	 0.000000e+00	 0	1.139292e-02	-2.754498e-03	-6.220125e-03	-1.953565e-01	8.467389e-01		 0	 1	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4655272	0.4508449	U	0.4686274	0.6162291
13773	129	183222	183223	1	  39	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.514443	3.366660	1.0815500	255	Ribosomal protein L29	J	ribosomal protein L29	1.387399	2.953274	1.0392706	92	Ribosomal protein S3	J	ribosomal protein S3	 1.557260e-03	 1	1.614026e-02	-4.034842e-03	-2.613434e-02	-3.086001e-01	1.238361e+00	J	 1	 8	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4867810	0.4376053	0.4265891	Y	1.4497162	0.7118045
13773	129	183223	183224	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.387399	2.953274	1.0392706	92	Ribosomal protein S3	J	ribosomal protein S3	1.608678	3.479212	1.1502067	-	-	-	conserved protein part 2, authentic frameshift	 0.000000e+00	 0	4.896445e-02	-1.006531e-02	-4.452468e-02	-4.624973e-01	1.976797e+00		 8	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4099790	0.4082992	U	0.4686274	0.6162291
13773	129	183224	183225	1	 -48	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.608678	3.479212	1.1502067	-	-	-	conserved protein part 2, authentic frameshift	1.395806	3.069681	1.0449615	-	-	-	conserved protein part 1, authentic frameshift	 0.000000e+00	 0	4.531438e-02	-8.742950e-03	-1.364645e-01	-4.050232e-01	1.797616e+00		 0	 0	FALSE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4184629	0.4108104	U	0.4686274	0.6162291
13773	129	183225	183226	1	 366	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.395806	3.069681	1.0449615	-	-	-	conserved protein part 1, authentic frameshift	1.339556	2.838446	1.0054300	91	Ribosomal protein L22	J	ribosomal protein L22	 0.000000e+00	 0	3.164113e-03	 6.216649e-03	 1.173407e-01	 3.835019e-01	1.402655e-01		 0	13	FALSE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6270495	0.5956690	U	0.4686274	0.6162291
13773	129	183226	183227	1	 100	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.339556	2.838446	1.0054300	91	Ribosomal protein L22	J	ribosomal protein L22	1.518476	3.303035	1.1391530	-	-	-	hypothetical protein	 0.000000e+00	 0	3.201238e-02	-7.502363e-03	-8.731693e-02	-5.102688e-01	2.090610e+00		13	 0	FALSE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4043835	0.4072458	U	0.4686274	0.6162291
13773	129	183227	183228	1	  71	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.518476	3.303035	1.1391530	-	-	-	hypothetical protein	1.411016	3.406518	1.1534596	382	4-hydroxybenzoate polyprenyltransferase and related prenyltransferases	H	conserved hypothetical protein	 0.000000e+00	 0	1.154767e-02	-2.708617e-03	-1.822013e-02	-1.858937e-01	8.382857e-01		 0	 1	FALSE	 TRUE	 94	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4684601	0.4517945	U	0.4686274	0.6162291
13773	129	183228	183229	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.411016	3.406518	1.1534596	382	4-hydroxybenzoate polyprenyltransferase and related prenyltransferases	H	conserved hypothetical protein	1.435928	3.131608	1.0806831	1011	Predicted hydrolase (HAD superfamily)	R	conserved hypothetical protein	 7.562104e-04	 1	6.206287e-04	 6.244208e-04	 2.450574e-02	 1.609368e-02	6.298058e-02		 1	 4	 TRUE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.5180940	0.6195629	U	0.4686274	0.6162291
13773	129	183229	183230	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.435928	3.131608	1.0806831	1011	Predicted hydrolase (HAD superfamily)	R	conserved hypothetical protein	1.468698	3.154253	1.0507944	-	-	-	hypothetical protein	 0.000000e+00	 0	1.073884e-03	-2.676239e-04	 1.776174e-02	-1.353332e-02	9.518385e-02		 4	 0	 TRUE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5172398	0.6086719	U	0.4686274	0.6162291
13773	129	183230	183231	1	  53	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.468698	3.154253	1.0507944	-	-	-	hypothetical protein	1.554319	3.605177	1.1744064	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	7.330846e-03	 1.781178e-03	 6.770605e-02	 1.939777e-01	2.534655e-01		 0	 1	FALSE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5475706	0.5613233	U	0.4686274	0.6162291
13773	129	183231	183232	1	 439	Divergent	-	+	 0.000000	0	  0.000000	 -0.05918887	1.554319	3.605177	1.1744064	-	-	-	conserved within P. aerophilum	1.423033	3.179251	1.1123817	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	 2.915931e-02	 1	1.723598e-02	-2.918980e-03	-3.825220e-02	-1.456289e-01	9.041777e-01		 1	 9	FALSE	 TRUE	 94	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.7296993	0.4779114	0.4460064	U	0.4686274	0.5589164
13773	129	183232	183233	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.423033	3.179251	1.1123817	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	1.409373	3.139282	1.1094765	-	-	-	hypothetical protein	 0.000000e+00	 0	1.865822e-04	 1.191676e-03	 3.711246e-02	 6.096092e-02	1.584159e-02		 9	 0	 TRUE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184822	0.6399079	U	0.4686274	0.6162291
13773	129	183233	183234	1	   9	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.409373	3.139282	1.1094765	-	-	-	hypothetical protein	1.295717	2.806953	0.9200014	328	Ribonuclease HI	L	hypothetical protein	 0.000000e+00	 0	1.291769e-02	 6.541418e-03	 1.542826e-01	 3.028539e-01	4.038051e-01		 0	 0	 TRUE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5931175	0.5117668	U	0.4686274	0.6162291
13773	129	183234	183235	1	 783	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.295717	2.806953	0.9200014	328	Ribonuclease HI	L	hypothetical protein	1.347503	2.912829	1.0014635	4978	Transcriptional regulator, effector-binding domain/component	KT	hypothetical protein	 0.000000e+00	 0	2.681810e-03	 1.617304e-02	 1.757016e-01	 7.585977e-01	2.475249e-02		 0	 0	FALSE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7703495	0.6354990	U	0.4686274	0.6162291
13773	129	183235	183236	1	  44	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.347503	2.912829	1.0014635	4978	Transcriptional regulator, effector-binding domain/component	KT	hypothetical protein	1.572506	3.406962	1.1022781	1637	Predicted nuclease of the RecB family	L	conserved hypothetical protein	 0.000000e+00	 0	5.062620e-02	-1.258238e-02	-1.165374e-01	-6.443805e-01	2.577713e+00		 0	14	FALSE	 TRUE	 94	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3903043	0.4028974	U	0.4686274	0.6162291
13773	129	183236	183237	1	 197	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.572506	3.406962	1.1022781	1637	Predicted nuclease of the RecB family	L	conserved hypothetical protein	1.368134	2.798863	1.0216147	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	4.176776e-02	-1.008369e-02	-1.168105e-01	-5.474438e-01	2.207608e+00		14	 0	 TRUE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3989104	0.4056432	U	0.4686274	0.6162291
13773	129	183237	183238	1	 -17	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.368134	2.798863	1.0216147	-	-	-	conserved within P. aerophilum	1.353436	2.908806	1.0250222	160	4-aminobutyrate aminotransferase and related aminotransferases	E	4-aminobutyrate aminotransferase	 0.000000e+00	 0	2.160410e-04	 8.155714e-03	 1.228607e-01	 5.126772e-01	6.743397e-03		 0	44	 TRUE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6785805	0.6447284	U	0.4686274	0.6162291
13773	129	183238	183239	1	 896	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.353436	2.908806	1.0250222	160	4-aminobutyrate aminotransferase and related aminotransferases	E	4-aminobutyrate aminotransferase	1.422413	3.177433	1.1218406	-	-	-	P. aerophilum family 59 protein	 0.000000e+00	 0	4.757790e-03	 2.838781e-03	 3.169439e-02	 1.513009e-01	3.121576e-01		44	 0	FALSE	 TRUE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5307995	0.5377013	U	0.4686274	0.6162291
13773	129	183239	183240	1	 -22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.422413	3.177433	1.1218406	-	-	-	P. aerophilum family 59 protein	1.430001	3.566885	1.1948037	-	-	-	hypothetical protein	 0.000000e+00	 0	5.758354e-05	 6.199269e-04	 2.701535e-02	 2.343020e-02	6.743397e-03		 0	 0	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174195	0.6447284	U	0.4686274	0.6162291
13773	129	183240	183241	1	  61	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430001	3.566885	1.1948037	-	-	-	hypothetical protein	1.647826	3.565597	1.0726948	-	-	-	hypothetical protein	 0.000000e+00	 0	4.744773e-02	-4.202020e-03	 6.843413e-02	-1.093109e-01	1.099038e+00		 0	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4883835	0.4327437	U	0.4686274	0.6162291
13773	129	183241	183242	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.647826	3.565597	1.0726948	-	-	-	hypothetical protein	1.388061	2.982339	1.0012146	-	-	-	hypothetical protein	 0.000000e+00	 0	6.747820e-02	-1.244057e-02	-2.125248e-01	-4.815394e-01	2.097273e+00		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4084238	0.4071738	U	0.4686274	0.6162291
13773	129	183242	183243	1	   1	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.388061	2.982339	1.0012146	-	-	-	hypothetical protein	1.462467	3.088877	1.0718748	-	-	-	hypothetical protein	 0.000000e+00	 0	5.536337e-03	-7.013615e-04	 2.662718e-03	-1.048033e-01	5.182232e-01		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4896558	0.4901366	U	0.4686274	0.6162291
13773	129	183243	183244	1	 332	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.462467	3.088877	1.0718748	-	-	-	hypothetical protein	1.472821	3.662889	1.1531945	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.072049e-04	 2.373038e-04	 2.436694e-02	 5.939891e-02	8.201158e-03		 0	 0	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185928	0.6439704	U	0.4686274	0.6162291
13773	129	183244	183245	1	  40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.472821	3.662889	1.1531945	-	-	-	conserved within P. aerophilum	1.374909	3.035140	1.0549031	396	ABC-type transport system involved in Fe-S cluster assembly, ATPase component	O	ABC transporter, putative	 0.000000e+00	 0	9.586831e-03	-1.638923e-03	 1.526452e-02	-1.849466e-01	8.538157e-01		 0	55	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4687349	0.4498973	U	0.4686274	0.6162291
13773	129	183245	183246	1	  44	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.374909	3.035140	1.0549031	396	ABC-type transport system involved in Fe-S cluster assembly, ATPase component	O	ABC transporter, putative	1.213085	2.834179	1.1626772	-	-	-	paREP2a	 0.000000e+00	 0	2.618695e-02	 1.822676e-02	 3.632147e-01	 6.303677e-01	1.357043e-01		55	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7293391	0.5968702	U	0.4686274	0.6162291
13773	129	183246	183247	1	  52	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.213085	2.834179	1.1626772	-	-	-	paREP2a	1.315401	2.674295	1.0956591	-	-	-	paREP2a	 0.000000e+00	 0	1.046858e-02	 3.240792e-02	 3.024049e-01	 9.064412e-01	8.481519e-03		 0	 0	FALSE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8061115	0.6437931	U	0.4686274	0.6162291
13773	129	183247	183248	1	 199	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.315401	2.674295	1.0956591	-	-	-	paREP2a	1.362978	3.062382	1.1148174	-	-	-	paREP2b	 0.000000e+00	 0	2.263554e-03	 1.202371e-02	 1.342090e-01	 6.418885e-01	3.981602e-02		 0	 0	FALSE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7340133	0.6280980	U	0.4686274	0.6162291
13773	129	183248	183249	1	  69	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.362978	3.062382	1.1148174	-	-	-	paREP2b	1.323758	2.843331	1.0042994	719	ABC-type transport system involved in Fe-S cluster assembly, permease component	O	ABC transporter subunit, putative	 0.000000e+00	 0	1.538226e-03	 1.128486e-02	 1.742021e-01	 6.272260e-01	3.197592e-02		 0	50	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7280731	0.6315628	U	0.4686274	0.6162291
13773	129	183249	183250	1	  52	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.323758	2.843331	1.0042994	719	ABC-type transport system involved in Fe-S cluster assembly, permease component	O	ABC transporter subunit, putative	1.650916	3.421171	1.0768283	-	-	-	hypothetical protein	 0.000000e+00	 0	1.070327e-01	-2.546620e-02	-2.172940e-01	-8.279111e-01	3.313909e+00		50	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3808126	0.3998176	U	0.4686274	0.6162291
13773	129	183250	183251	1	 302	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.650916	3.421171	1.0768283	-	-	-	hypothetical protein	1.319585	2.848840	0.9910110	-	-	-	hypothetical protein	 0.000000e+00	 0	1.097804e-01	-2.629876e-02	-3.437319e-01	-8.400969e-01	3.361580e+00		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3805732	0.3997492	U	0.4686274	0.6162291
13773	129	183251	183252	1	 161	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.319585	2.848840	0.9910110	-	-	-	hypothetical protein	1.477350	3.192715	1.0777050	-	-	-	hypothetical protein	 0.000000e+00	 0	2.488974e-02	-3.421325e-03	-6.167411e-02	-3.051132e-01	1.534328e+00		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4389167	0.4161356	U	0.4686274	0.6162291
13773	129	183252	183253	1	 136	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.477350	3.192715	1.0777050	-	-	-	hypothetical protein	1.339046	2.782547	0.9952111	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	 0.000000e+00	 0	1.912797e-02	-2.916180e-03	 1.698318e-02	-2.840261e-01	1.384189e+00		 0	 1	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4443634	0.4204509	U	0.4686274	0.6162291
13773	129	183253	183254	1	  88	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.339046	2.782547	0.9952111	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein (rimK)	1.512583	3.320114	1.1141327	-	-	-	hypothetical protein	 0.000000e+00	 0	3.011526e-02	-6.874566e-03	-8.218636e-02	-4.858002e-01	2.009301e+00		 1	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4070836	0.4078976	U	0.4686274	0.6162291
13773	129	183254	183255	1	 -31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.512583	3.320114	1.1141327	-	-	-	hypothetical protein	1.507498	3.467639	1.1493302	-	-	-	hypothetical protein	 0.000000e+00	 0	2.586499e-05	 3.433073e-03	 5.936323e-02	 3.214920e-01	6.808775e-04		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6002714	0.6526075	U	0.4686274	0.6162291
13773	129	183255	183256	1	 261	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.507498	3.467639	1.1493302	-	-	-	hypothetical protein	1.233927	2.735081	1.0263236	-	-	-	conserved within P. aerophilum part 2, authentic frameshift	 0.000000e+00	 0	7.484069e-02	-1.220084e-02	-9.815062e-03	-5.511291e-01	2.398576e+00		 0	 0	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3984502	0.4040709	U	0.4686274	0.6162291
13773	129	183256	183257	1	 118	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.233927	2.735081	1.0263236	-	-	-	conserved within P. aerophilum part 2, authentic frameshift	1.437745	3.219245	1.0745759	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	 0.000000e+00	 0	4.154169e-02	 2.967921e-03	-6.418413e-02	 3.816684e-02	9.144232e-01		 0	 0	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180137	0.4453835	U	0.4686274	0.6162291
13773	129	183257	183258	1	  20	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.437745	3.219245	1.0745759	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	1.504044	3.176954	1.0347545	-	-	-	hypothetical protein	 0.000000e+00	 0	4.395558e-03	-7.185721e-04	 1.890283e-02	-2.037921e-02	3.242791e-01		 0	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5153553	0.5331555	U	0.4686274	0.6162291
13773	129	183258	183259	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.504044	3.176954	1.0347545	-	-	-	hypothetical protein	1.550475	3.346463	1.0405616	-	-	-	hypothetical protein	 0.000000e+00	 0	2.155822e-03	 5.216792e-03	 9.962498e-02	 3.945414e-01	4.486724e-02		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6317926	0.6260343	U	0.4686274	0.6162291
13773	129	183259	183260	1	 508	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.550475	3.346463	1.0405616	-	-	-	hypothetical protein	1.536280	3.347254	1.1226469	675	Transposase and inactivated derivatives	L	paREP12	 0.000000e+00	 0	2.014921e-04	 8.410804e-03	 1.124475e-01	 5.205438e-01	1.781708e-03		 0	 0	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6844407	0.6506613	U	0.4686274	0.6162291
13773	129	183260	183261	1	 181	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.536280	3.347254	1.1226469	675	Transposase and inactivated derivatives	L	paREP12	1.741531	3.988302	1.1717687	-	-	-	paREP13	 0.000000e+00	 0	4.212793e-02	 2.462903e-02	 5.041842e-01	 6.883224e-01	7.933107e-02		 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7496520	0.6149078	U	0.4686274	0.6162291
13773	129	183261	183262	1	 -55	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.741531	3.988302	1.1717687	-	-	-	paREP13	1.311343	2.909454	1.0539343	-	-	-	hypothetical protein	 0.000000e+00	 0	1.850620e-01	-4.063391e-02	-6.183315e-01	-9.039415e-01	3.619630e+00		 0	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3788952	0.3992700	U	0.4686274	0.6162291
13773	129	183262	183263	1	  35	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.311343	2.909454	1.0539343	-	-	-	hypothetical protein	1.392666	3.166673	1.1007181	-	-	-	hypothetical protein	 0.000000e+00	 0	6.613482e-03	 8.224711e-03	 7.585161e-02	 4.385529e-01	1.967736e-01		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6508149	0.5806302	U	0.4686274	0.6162291
13773	129	183263	183264	1	 -16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.392666	3.166673	1.1007181	-	-	-	hypothetical protein	1.369438	2.890527	0.9973726	1325	Predicted exosome subunit	J	conserved protein	 0.000000e+00	 0	5.395176e-04	 4.812926e-03	 8.531006e-02	 3.152899e-01	3.420938e-02		 0	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5979459	0.6303843	U	0.4686274	0.6162291
13773	129	183264	183265	1	  69	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.369438	2.890527	0.9973726	1325	Predicted exosome subunit	J	conserved protein	1.319619	2.829927	0.9873312	1632	Ribosomal protein L15E	J	ribosomal protein L15	 0.000000e+00	 0	2.481981e-03	 1.079945e-02	 1.740481e-01	 5.945321e-01	5.623777e-02	J	 0	 6	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7184941	0.6216788	Y	1.4497162	0.7118045
13773	129	183265	183266	1	  99	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.319619	2.829927	0.9873312	1632	Ribosomal protein L15E	J	ribosomal protein L15	1.374352	3.011704	1.0764663	-	-	-	hypothetical protein	 0.000000e+00	 0	2.995753e-03	 1.015191e-02	 1.104123e-01	 5.690128e-01	7.051205e-02		 6	 0	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7071471	0.6176510	U	0.4686274	0.6162291
13773	129	183266	183267	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.374352	3.011704	1.0764663	-	-	-	hypothetical protein	1.321866	2.859727	0.9120978	1351	Predicted alternative thymidylate synthase	F	conserved hypothetical protein	 0.000000e+00	 0	2.754847e-03	 9.978816e-03	 1.649462e-01	 5.646395e-01	6.689151e-02		 0	 2	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7047620	0.6185855	U	0.4686274	0.6162291
13773	129	183267	183268	1	 106	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.321866	2.859727	0.9120978	1351	Predicted alternative thymidylate synthase	F	conserved hypothetical protein	1.331535	3.129939	1.0796021	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	glycosyl transferase, putative	 0.000000e+00	 0	9.348480e-05	 1.552489e-02	 1.961357e-01	 7.713318e-01	7.215181e-04	0	 2	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7740259	0.6523872	N	0.5492530	0.6245624
13773	129	183268	183269	1	 -31	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.331535	3.129939	1.0796021	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	glycosyl transferase, putative	1.345210	2.867779	0.9944973	1190	Lysyl-tRNA synthetase (class II)	J	lysyl-tRNA synthetase	 0.000000e+00	 0	1.870189e-04	 1.272689e-02	 1.616939e-01	 6.996417e-01	3.138751e-03	0	 0	54	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7518639	0.6484515	N	0.5492530	0.6245624
13773	129	183269	183270	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.345210	2.867779	0.9944973	1190	Lysyl-tRNA synthetase (class II)	J	lysyl-tRNA synthetase	1.432723	3.228347	1.0942396	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	conserved hypothetical protein	 0.000000e+00	 0	7.658519e-03	 1.982415e-03	 1.616940e-02	 6.456321e-02	5.315674e-01		54	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182946	0.4872443	U	0.4686274	0.6162291
13773	129	183270	183271	1	  28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.432723	3.228347	1.0942396	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	conserved hypothetical protein	1.432499	3.244769	1.0844549	-	-	-	hypothetical protein	 0.000000e+00	 0	5.000399e-08	 3.527376e-04	 2.488333e-02	 6.738096e-03	2.120380e-05		 0	 0	FALSE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192915	0.6555893	U	0.4686274	0.6162291
13773	129	183271	183272	1	  21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.432499	3.244769	1.0844549	-	-	-	hypothetical protein	1.336623	2.941711	0.9439039	43	3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases	H	conserved hypothetical protein	 0.000000e+00	 0	9.192376e-03	 2.168408e-03	 7.863580e-02	 7.172185e-02	5.854657e-01		 0	26	FALSE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180012	0.4789857	U	0.4686274	0.6162291
13773	129	183272	183273	1	 200	Same	-	-	 0.000000	0	  0.000000	 -0.28560091	1.336623	2.941711	0.9439039	43	3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases	H	conserved hypothetical protein	1.350479	3.068674	1.0357223	1814	Uncharacterized membrane protein	S	conserved hypothetical protein	 3.696649e-04	 5	1.920115e-04	 1.158188e-02	 1.485664e-01	 6.578850e-01	5.656702e-03		26	 5	FALSE	 TRUE	 95	 TRUE	0.4469764	0.2563770	0.5480306	0.4469764	0.7448207	0.4467420	0.7378746	0.6459298	U	0.4686274	0.5433937
13773	129	183273	183274	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.350479	3.068674	1.0357223	1814	Uncharacterized membrane protein	S	conserved hypothetical protein	1.399679	3.175925	1.0053583	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	2.420587e-03	 5.218646e-03	 6.268589e-02	 3.280510e-01	1.230109e-01		 5	 0	FALSE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6028852	0.6000329	U	0.4686274	0.6162291
13773	129	183274	183275	1	 643	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.399679	3.175925	1.0053583	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.560392	3.280478	1.0679301	-	-	-	rRNA intron-encoded homing endonuclease, possible	 0.000000e+00	 0	2.582859e-02	-5.636764e-03	-2.178926e-02	-3.306520e-01	1.449963e+00		 0	 0	FALSE	 TRUE	 93	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4324111	0.4184889	U	0.4686274	0.6162291
13773	129	183275	183276	1	4592	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.560392	3.280478	1.0679301	-	-	-	rRNA intron-encoded homing endonuclease, possible	1.443150	3.233012	1.1058876	-	-	-	hypothetical protein	 0.000000e+00	 0	1.374550e-02	-8.984190e-04	-1.976554e-02	 1.377717e-02	5.819477e-01		 0	 0	 TRUE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183178	0.4794292	U	0.4686274	0.6162291
13773	129	183276	183277	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.443150	3.233012	1.1058876	-	-	-	hypothetical protein	1.470511	3.230770	1.0760869	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	7.486306e-04	-1.575849e-04	 1.965088e-02	 4.863327e-03	6.649511e-02		 0	 0	 TRUE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5194953	0.6186810	U	0.4686274	0.6162291
13773	129	183277	183278	1	 -28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.470511	3.230770	1.0760869	-	-	-	conserved within P. aerophilum	1.552939	3.295793	1.1039582	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	6.794355e-03	 1.941432e-03	 6.869585e-02	 2.074315e-01	2.278725e-01		 0	 0	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5526212	0.5715668	U	0.4686274	0.6162291
13773	129	183278	183279	1	 346	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.552939	3.295793	1.1039582	-	-	-	conserved within P. aerophilum	1.477559	3.227649	1.0835072	666	FOG: Ankyrin repeat	R	hypothetical protein with 4 ankyrin repeats	 0.000000e+00	 0	5.682166e-03	 2.657104e-03	 2.735740e-02	 2.588560e-01	1.673268e-01		 0	 3	 TRUE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5731403	0.5882371	U	0.4686274	0.6162291
13773	129	183279	183280	1	 152	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.477559	3.227649	1.0835072	666	FOG: Ankyrin repeat	R	hypothetical protein with 4 ankyrin repeats	1.483605	3.268526	1.1161055	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.654781e-05	 8.428674e-04	 3.148899e-02	 1.356289e-01	2.565660e-03		 3	 0	FALSE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5265850	0.6491703	U	0.4686274	0.6162291
13773	129	183280	183281	1	  14	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.483605	3.268526	1.1161055	-	-	-	conserved within P. aerophilum	1.690258	3.818338	1.1169228	-	-	-	hypothetical protein	 0.000000e+00	 0	4.270542e-02	 7.694276e-03	 2.529615e-01	 3.808508e-01	3.260296e-01		 0	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6255873	0.5324841	U	0.4686274	0.6162291
13773	129	183281	183282	1	 287	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.690258	3.818338	1.1169228	-	-	-	hypothetical protein	1.688799	3.676240	1.1046154	-	-	-	paREP7	 0.000000e+00	 0	2.126835e-06	 5.670802e-02	 6.820198e-01	 9.313804e-01	5.889944e-07		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8080425	0.6559820	U	0.4686274	0.6162291
13773	129	183282	183283	1	-103	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.688799	3.676240	1.1046154	-	-	-	paREP7	1.457895	3.017247	1.0219153	-	-	-	paREP7	 0.000000e+00	 0	5.331689e-02	 1.543588e-03	-1.042382e-01	 1.502943e-01	6.543233e-01		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5305335	0.4698403	U	0.4686274	0.6162291
13773	129	183283	183284	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.457895	3.017247	1.0219153	-	-	-	paREP7	1.356548	3.138884	1.0855686	-	-	-	paREP7	 0.000000e+00	 0	1.027108e-02	-6.166675e-04	 3.626417e-02	-1.157398e-01	8.076533e-01		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4865159	0.4542712	U	0.4686274	0.6162291
13773	129	183284	183285	1	 526	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.356548	3.138884	1.0855686	-	-	-	paREP7	1.485522	3.227949	0.9503101	2445	Uncharacterized conserved protein	S	paREP11	 0.000000e+00	 0	1.663424e-02	-3.236979e-03	-3.699601e-02	-3.061687e-01	1.334087e+00		 0	 1	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4385436	0.4227586	U	0.4686274	0.6162291
13773	129	183285	183286	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.485522	3.227949	0.9503101	2445	Uncharacterized conserved protein	S	paREP11	1.488832	3.163130	1.0609744	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.095596e-05	 1.277780e-03	 3.627943e-02	 1.787038e-01	4.617716e-04		 1	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5420833	0.6534780	U	0.4686274	0.6162291
13773	129	183286	183287	1	1162	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.488832	3.163130	1.0609744	-	-	-	conserved within P. aerophilum	1.474347	3.080635	1.0466614	2513	PEP phosphonomutase and related enzymes	G	isocitrate lyase	 0.000000e+00	 0	2.098104e-04	 8.594007e-04	 2.856450e-02	 1.334455e-01	1.584159e-02		 0	12	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5255413	0.6399079	U	0.4686274	0.6162291
13773	129	183287	183288	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.37949617	1.474347	3.080635	1.0466614	2513	PEP phosphonomutase and related enzymes	G	isocitrate lyase	1.515150	3.202444	1.0555293	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 2.142647e-02	 7	1.664826e-03	 1.463504e-03	 4.683422e-02	 1.828085e-01	8.194620e-02		12	 7	 TRUE	 TRUE	100	 TRUE	0.4469764	0.2454672	0.5480306	0.4469764	0.7596462	0.6873026	0.5431221	0.6136849	U	0.4686274	0.5399427
13773	129	183288	183289	1	  12	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.515150	3.202444	1.0555293	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.495120	3.115176	0.9935961	-	-	-	paREP7	 0.000000e+00	 0	4.011798e-04	 2.787912e-03	 4.786756e-02	 2.821908e-01	1.415059e-02		 7	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5854660	0.6408729	U	0.4686274	0.6162291
13773	129	183289	183290	1	 133	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.495120	3.115176	0.9935961	-	-	-	paREP7	1.365786	3.052105	1.0584864	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.672726e-02	-3.743347e-03	-9.275530e-03	-3.277642e-01	1.357234e+00		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4339721	0.4220582	U	0.4686274	0.6162291
13773	129	183290	183291	1	 195	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.365786	3.052105	1.0584864	-	-	-	conserved within P. aerophilum	1.352580	3.249953	1.0959051	1132	ABC-type multidrug transport system, ATPase and permease components	V	ATP binding protein, degenerate	 0.000000e+00	 0	1.744011e-04	 8.459023e-03	 1.258278e-01	 5.273879e-01	5.541848e-03		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6874196	0.6460120	U	0.4686274	0.6162291
13773	129	183291	183292	1	 970	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.352580	3.249953	1.0959051	1132	ABC-type multidrug transport system, ATPase and permease components	V	ATP binding protein, degenerate	1.582283	3.631991	1.0936747	-	-	-	hypothetical protein	 0.000000e+00	 0	5.276341e-02	-1.293361e-02	-1.117739e-01	-6.359161e-01	2.548225e+00		 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3907742	0.4030349	U	0.4686274	0.6162291
13773	129	183292	183293	1	  25	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.582283	3.631991	1.0936747	-	-	-	hypothetical protein	1.339170	2.837672	0.9811342	5493	Uncharacterized conserved protein containing a coiled-coil domain	S	conserved hypothetical protein	 0.000000e+00	 0	5.910378e-02	-1.468882e-02	-1.625333e-01	-6.952938e-01	2.781190e+00		 0	 2	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3879478	0.4020739	U	0.4686274	0.6162291
13773	129	183293	183294	1	 185	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.339170	2.837672	0.9811342	5493	Uncharacterized conserved protein containing a coiled-coil domain	S	conserved hypothetical protein	1.441432	3.635180	1.2324555	306	Phosphate/sulphate permeases	P	phosphate permease, conjectural	 3.728161e-04	 1	1.045749e-02	 1.117812e-03	 2.077101e-03	-1.282830e-03	7.010688e-01		 2	 1	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.5199848	0.4647282	U	0.4686274	0.6162291
13773	129	183294	183295	1	 401	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.441432	3.635180	1.2324555	306	Phosphate/sulphate permeases	P	phosphate permease, conjectural	1.426771	3.099066	1.0692916	2132	Putative multicopper oxidases	Q	multicopper oxidase	 3.554731e-03	 1	2.149383e-04	 2.452462e-04	 2.489271e-02	-2.355978e-04	2.403333e-02	0	 1	17	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5281729	0.5199757	0.6357428	N	0.5492530	0.6245624
13773	129	183295	183296	1	 295	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.426771	3.099066	1.0692916	2132	Putative multicopper oxidases	Q	multicopper oxidase	1.482933	3.181296	1.0168500	-	-	-	paREP6	 0.000000e+00	 0	3.154167e-03	-7.765735e-04	 1.264460e-02	-5.948843e-02	2.927449e-01		17	 0	FALSE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5039448	0.5451177	U	0.4686274	0.6162291
13773	129	183296	183297	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.482933	3.181296	1.0168500	-	-	-	paREP6	1.428808	3.189057	1.0793402	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	2.929519e-03	-7.123272e-04	 1.117795e-02	-5.086261e-02	2.691563e-01		 0	 2	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5065612	0.5538632	U	0.4686274	0.6162291
13773	129	183297	183298	1	 -52	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.428808	3.189057	1.0793402	-	-	-	conserved hypothetical protein	1.424470	3.063779	1.0645230	-	-	-	paREP6	 0.000000e+00	 0	1.882497e-05	 6.080489e-04	 2.839266e-02	 2.316515e-02	2.050290e-03		 2	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174458	0.6502033	U	0.4686274	0.6162291
13773	129	183298	183299	1	 133	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.424470	3.063779	1.0645230	-	-	-	paREP6	1.431733	3.151837	1.0564965	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	5.275852e-05	 5.293055e-04	 2.606722e-02	 1.666265e-02	6.743397e-03		 0	 0	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180168	0.6447284	U	0.4686274	0.6162291
13773	129	183299	183300	1	 -31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.431733	3.151837	1.0564965	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.472807	3.225096	1.0511393	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	1.687093e-03	-4.210036e-04	 1.599823e-02	-2.760204e-02	1.496140e-01		 0	 1	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5128654	0.5933123	U	0.4686274	0.6162291
13773	129	183300	183301	1	 960	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.472807	3.225096	1.0511393	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.411238	3.425581	1.1864999	-	-	-	hypothetical protein	 0.000000e+00	 0	3.790838e-03	-8.599047e-04	 1.361371e-02	-8.841631e-02	3.537648e-01		 1	 0	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4957502	0.5241295	U	0.4686274	0.6162291
13773	129	183301	183302	1	  85	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.411238	3.425581	1.1864999	-	-	-	hypothetical protein	1.523486	3.772369	1.2038313	-	-	-	hypothetical protein	 0.000000e+00	 0	1.259973e-02	-2.894925e-03	-4.006496e-03	-1.933091e-01	8.867482e-01		 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4663742	0.4480717	U	0.4686274	0.6162291
13773	129	183302	183303	1	 252	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.523486	3.772369	1.2038313	-	-	-	hypothetical protein	1.302226	3.320308	1.1540364	-	-	-	hypothetical protein	 0.000000e+00	 0	4.895620e-02	-1.075395e-02	-6.169306e-02	-6.029871e-01	2.504312e+00		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3938159	0.4032760	U	0.4686274	0.6162291
13773	129	183303	183304	1	  87	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.302226	3.320308	1.1540364	-	-	-	hypothetical protein	1.429608	3.136181	1.0841201	-	-	-	paREP2b	 0.000000e+00	 0	1.622622e-02	 3.249630e-03	 3.432184e-03	 1.143721e-01	6.756007e-01		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5208838	0.4673400	U	0.4686274	0.6162291
13773	129	183304	183305	1	  10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.429608	3.136181	1.0841201	-	-	-	paREP2b	1.444929	3.237374	1.0567404	-	-	-	paREP8	 0.000000e+00	 0	2.347324e-04	 1.408225e-04	 2.128511e-02	-4.094689e-03	2.403333e-02		 0	 1	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198073	0.6357428	U	0.4686274	0.6162291
13773	129	183305	183306	1	  98	Divergent	-	+	 0.000000	0	  0.000000	 -0.07232066	1.444929	3.237374	1.0567404	-	-	-	paREP8	1.487045	3.168946	1.0695525	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 5.285113e-02	 1	1.773779e-03	-2.304607e-04	 2.116486e-02	 1.438324e-02	1.537988e-01		 1	 2	FALSE	 TRUE	106	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.8555544	0.5182143	0.5921731	U	0.4686274	0.5573725
13773	129	183306	183307	1	 -24	Same	+	+	 2.856470	0	  2.856470	  2.78414954	1.487045	3.168946	1.0695525	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.312332	3.025208	1.0115766	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 1.242508e-01	 2	3.052472e-02	-4.957821e-03	 8.650586e-03	-3.909627e-01	1.805857e+00		 2	 2	 TRUE	 TRUE	107	 TRUE	2.8950318	1.7172435	0.5480306	2.9213001	0.6838149	1.0601895	0.4214277	0.4107337	U	0.4686274	0.8496451
13773	129	183307	183308	1	  60	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.312332	3.025208	1.0115766	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.393908	3.267075	1.1003879	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein part 2, authentic frameshift	 0.000000e+00	 0	6.654642e-03	 7.993952e-03	 7.348810e-02	 4.290023e-01	2.029492e-01		 2	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6472706	0.5787234	U	0.4686274	0.6162291
13773	129	183308	183309	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.393908	3.267075	1.1003879	1266	Predicted metal-dependent membrane protease	R	P. aerophilum family 322 protein part 2, authentic frameshift	1.455060	3.583202	1.1749226	-	-	-	P. aerophilum family 322 protein part 1, authentic frameshift	 0.000000e+00	 0	3.739657e-03	-2.108313e-04	 9.914832e-03	-6.133729e-02	3.583442e-01		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5034887	0.5224252	U	0.4686274	0.6162291
13773	129	183309	183310	1	  45	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.455060	3.583202	1.1749226	-	-	-	P. aerophilum family 322 protein part 1, authentic frameshift	1.527472	3.552802	1.1477327	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	5.243441e-03	 2.790264e-04	 3.866477e-02	 8.691967e-02	2.820482e-01		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176951	0.5503270	U	0.4686274	0.6162291
13773	129	183310	183311	1	  47	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.527472	3.552802	1.1477327	-	-	-	conserved within P. aerophilum	1.441876	3.510945	1.1687858	-	-	-	hypothetical protein	 0.000000e+00	 0	7.326644e-03	-7.240177e-04	-2.196519e-03	 4.574720e-03	4.295630e-01		 0	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195633	0.5075206	U	0.4686274	0.6162291
13773	129	183311	183312	1	  25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.441876	3.510945	1.1687858	-	-	-	hypothetical protein	1.440212	3.557289	1.1562086	-	-	-	hypothetical protein	 0.000000e+00	 0	2.770790e-06	 1.064074e-04	 2.206933e-02	-5.831045e-05	2.355978e-04		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199722	0.6542630	U	0.4686274	0.6162291
13773	129	183312	183313	1	  39	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.440212	3.557289	1.1562086	-	-	-	hypothetical protein	1.325868	2.868447	0.9780792	82	Chorismate synthase	E	chorismate synthase (aroC)	 0.000000e+00	 0	1.307440e-02	 1.403515e-03	 7.684404e-02	 7.437821e-03	7.614337e-01		 0	65	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191720	0.4584148	U	0.4686274	0.6162291
13773	129	183313	183314	1	  -3	Same	-	-	 4.935912	0	  7.598500	  4.51827306	1.325868	2.868447	0.9780792	82	Chorismate synthase	E	chorismate synthase (aroC)	1.384375	2.940641	1.0313219	169	Shikimate 5-dehydrogenase	E	shikimate 5-dehydrogenase (aroE)	 4.384482e-02	21	3.422988e-03	 8.412431e-03	 9.049071e-02	 4.861630e-01	1.083991e-01	E	65	21	FALSE	 TRUE	106	 TRUE	2.8363652	1.7559148	0.5480306	2.8096798	0.7775415	0.8210091	0.6686386	0.6034335	Y	1.4497162	0.9019390
13773	129	183314	183315	1	 114	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.384375	2.940641	1.0313219	169	Shikimate 5-dehydrogenase	E	shikimate 5-dehydrogenase (aroE)	1.586007	3.523259	1.1270987	-	-	-	hypothetical protein	 0.000000e+00	 0	4.065550e-02	-9.021582e-03	-5.013306e-02	-4.628713e-01	1.933871e+00		21	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4097574	0.4091482	U	0.4686274	0.6162291
13773	129	183315	183316	1	 122	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.586007	3.523259	1.1270987	-	-	-	hypothetical protein	1.344161	2.963945	1.0641007	-	-	-	hypothetical protein	 0.000000e+00	 0	5.848940e-02	-1.443491e-02	-1.648564e-01	-6.817534e-01	2.727694e+00		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3888918	0.4022109	U	0.4686274	0.6162291
13773	129	183316	183317	1	  44	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.344161	2.963945	1.0641007	-	-	-	hypothetical protein	1.330441	3.159844	1.0971658	345	Pyrroline-5-carboxylate reductase	E	pyrroline-5-carboxylate reductase	 0.000000e+00	 0	1.882413e-04	 1.296993e-02	 1.803362e-01	 7.054557e-01	3.053347e-03		 0	43	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7549766	0.6486369	U	0.4686274	0.6162291
13773	129	183317	183318	1	 -17	Convergent	+	-	 0.000000	0	  0.000000	 -1.03979529	1.330441	3.159844	1.0971658	345	Pyrroline-5-carboxylate reductase	E	pyrroline-5-carboxylate reductase	1.447485	3.143884	1.0753571	1051	ADP-ribose pyrophosphatase	F	mutT/nudix family protein	 1.875385e-04	15	1.369931e-02	 4.726822e-04	-1.084829e-02	-5.062760e-02	8.580759e-01	0	43	15	 TRUE	 TRUE	108	FALSE	0.4469764	0.2095004	0.5480306	0.4469764	0.7783720	0.4431298	0.5066314	0.4495188	N	0.5492530	0.5373483
13773	129	183318	183319	1	  48	Divergent	-	+	 0.000000	0	  0.000000	 -0.07232066	1.447485	3.143884	1.0753571	1051	ADP-ribose pyrophosphatase	F	mutT/nudix family protein	1.389154	2.965462	1.0363386	1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	T	phoH like protein	 1.976565e-03	 3	3.402456e-03	 2.432292e-04	 3.337996e-02	-2.958872e-02	3.199235e-01	0	15	 3	FALSE	 TRUE	107	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.7136133	0.4959669	0.5122039	0.5350739	N	0.5492530	0.5660839
13773	129	183319	183320	1	  28	Same	+	+	 0.000000	0	  0.000000	 -0.07232066	1.389154	2.965462	1.0363386	1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	T	phoH like protein	1.452895	3.158771	1.0731076	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	 6.538236e-03	 3	4.062892e-03	-9.349689e-05	 9.813080e-03	-5.800947e-02	3.864392e-01		 3	 9	 TRUE	 TRUE	108	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.7136133	0.5642163	0.5044691	0.5147662	U	0.4686274	0.5573725
13773	129	183320	183321	1	  58	Convergent	+	-	 0.000000	0	  0.000000	 -1.48741960	1.452895	3.158771	1.0731076	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	1.461498	3.167838	1.0859591	451	Nucleoside-diphosphate-sugar epimerases	MG	UDP-glucose 4-epimerase (galE-1)	 1.489667e-02	 9	7.400377e-05	 1.517974e-05	 2.116875e-02	 2.229108e-02	6.493663e-03		 9	66	 TRUE	 TRUE	109	FALSE	0.4469764	0.2017465	0.5480306	0.4469764	0.7702221	0.6378824	0.5175274	0.6450314	U	0.4686274	0.5260780
13773	129	183321	183322	1	  30	Same	-	-	 0.000000	0	  0.000000	-12.82859013	1.461498	3.167838	1.0859591	451	Nucleoside-diphosphate-sugar epimerases	MG	UDP-glucose 4-epimerase (galE-1)	1.454212	3.244911	1.1226307	128	5-enolpyruvylshikimate-3-phosphate synthase	E	3-phosphoshikimate 1-carboxyvinyltransferase (aroA)	 1.107425e-01	62	5.307847e-05	 2.848820e-05	 2.083167e-02	 2.378713e-02	5.315674e-03		66	62	FALSE	 TRUE	108	 TRUE	0.4469764	0.1765834	0.5480306	0.4469764	0.7708228	1.0467198	0.5174139	0.6461561	U	0.4686274	0.5180786
13773	129	183322	183323	1	 -28	Same	-	-	18.759390	0	 27.701125	 22.85576950	1.454212	3.244911	1.1226307	128	5-enolpyruvylshikimate-3-phosphate synthase	E	3-phosphoshikimate 1-carboxyvinyltransferase (aroA)	1.433181	3.246241	1.1211314	337	3-dehydroquinate synthetase	E	3-dehydroquinate synthase	 1.814968e-02	27	4.423270e-04	-5.134555e-05	 2.095948e-02	-8.990411e-03	3.829936e-02	E	62	27	FALSE	 TRUE	107	 TRUE	2.4200974	1.9340839	0.5480306	2.4850761	0.7761702	0.6635409	0.5188824	0.6286933	Y	1.4497162	0.9239716
13773	129	183323	183324	1	  -3	Same	-	-	 7.826284	0	 13.302282	 12.05565452	1.433181	3.246241	1.1211314	337	3-dehydroquinate synthetase	E	3-dehydroquinate synthase	1.349504	2.998439	1.0755541	3958	Transketolase, C-terminal subunit	G	transketolase (C terminal section)	-4.409222e-03	18	7.001834e-03	 1.855637e-03	 6.795570e-02	 5.744816e-02	4.985249e-01	0	27	18	FALSE	 TRUE	106	 TRUE	2.7135479	1.8657252	0.5480306	2.6845552	0.7781393	0.5247710	0.5186591	0.4927282	N	0.5492530	0.8785628
13773	129	183324	183325	1	  -6	Same	-	-	34.423181	0	 57.942201	 57.82050377	1.349504	2.998439	1.0755541	3958	Transketolase, C-terminal subunit	G	transketolase (C terminal section)	1.424300	3.079848	1.0708898	3959	Transketolase, N-terminal subunit	G	transketolase (N terminal section)	 4.008490e-01	18	5.594518e-03	 2.760459e-03	 2.851409e-02	 1.406283e-01	3.592636e-01	G	18	19	FALSE	 TRUE	105	 TRUE	2.1452595	2.0478216	0.5480306	2.1662697	0.7781393	1.2469336	0.5278940	0.5214465	Y	1.4497162	0.9356295
13773	129	183325	183326	1	 101	Divergent	-	+	 0.000000	0	  0.000000	 -0.66063515	1.424300	3.079848	1.0708898	3959	Transketolase, N-terminal subunit	G	transketolase (N terminal section)	1.343986	2.905214	1.0120604	162	Tyrosyl-tRNA synthetase	J	tyrosyl-tRNA synthetase	 2.698094e-02	12	6.450324e-03	 2.909941e-03	 8.219375e-02	 1.467185e-01	4.008843e-01	0	19	12	FALSE	 TRUE	104	FALSE	0.4469764	0.2264183	0.5480306	0.4469764	0.7776747	0.7209359	0.5294737	0.5124751	N	0.5492530	0.5427026
13773	129	183326	183327	1	 171	Same	+	+	 0.000000	0	  0.000000	 -0.78703061	1.343986	2.905214	1.0120604	162	Tyrosyl-tRNA synthetase	J	tyrosyl-tRNA synthetase	1.447341	3.192308	1.0972553	2876	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	E	phospho-2-dehydro-3-deoxyheptonate aldolase	-2.980329e-02	12	1.068228e-02	 4.351603e-04	-3.428864e-03	-4.682506e-02	7.587573e-01	0	12	37	 TRUE	 TRUE	105	 TRUE	0.4469764	0.2188849	0.5480306	0.4469764	0.7776747	0.5246769	0.5073958	0.4586701	N	0.5492530	0.5403195
13773	129	183327	183328	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -1.26849823	1.447341	3.192308	1.0972553	2876	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	E	phospho-2-dehydro-3-deoxyheptonate aldolase	1.417484	3.280191	1.1335238	2068	Uncharacterized MobA-related protein	R	conserved protein	 9.633797e-03	14	8.914718e-04	 1.373832e-04	 2.522231e-02	-1.382664e-02	8.866957e-02		37	14	 TRUE	 TRUE	106	FALSE	0.4469764	0.2043655	0.5480306	0.4469764	0.7782928	0.5939425	0.5171720	0.6116373	U	0.4686274	0.5269099
13773	129	183328	183329	1	 -18	Same	-	-	16.314705	0	 20.303689	 19.28814048	1.417484	3.280191	1.1335238	2068	Uncharacterized MobA-related protein	R	conserved protein	1.421992	3.084915	1.0955774	1529	Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs	C	carbon monoxide dehydrogenase large subunit, conjectural	 2.057461e-01	14	2.032315e-05	 9.969574e-04	 3.166960e-02	 4.959156e-02	1.140293e-03		14	23	FALSE	 TRUE	105	 TRUE	2.5133856	1.9110896	0.5480306	2.5950686	0.7782928	1.1446908	0.5187781	0.6516922	U	0.4686274	0.8835124
13773	129	183329	183330	1	  -3	Same	-	-	 9.173573	0	 10.677650	 10.31729894	1.421992	3.084915	1.0955774	1529	Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs	C	carbon monoxide dehydrogenase large subunit, conjectural	1.452800	3.111643	1.0640898	2080	Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs	C	carbon monoxide dehydrogenase small subunit, conjectural	 7.906027e-02	10	9.491624e-04	-4.138338e-05	 1.806367e-02	-2.313217e-02	1.014396e-01	C	23	10	FALSE	 TRUE	104	 TRUE	2.6922844	1.8453786	0.5480306	2.7485140	0.7739415	0.9520001	0.5143350	0.6061495	Y	1.4497162	0.9129984
13773	129	183330	183331	1	  -3	Same	-	-	13.915602	0	 15.419679	 15.36049054	1.452800	3.111643	1.0640898	2080	Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs	C	carbon monoxide dehydrogenase small subunit, conjectural	1.462820	3.303553	1.1190646	1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs	C	carbon monoxide dehydrogenase medium subunit, conjectural	 1.076066e-01	10	1.003898e-04	 1.608415e-05	 2.125232e-02	 2.321816e-02	9.056378e-03	C	10	14	FALSE	 TRUE	103	 TRUE	2.5913523	1.8800694	0.5480306	2.6706159	0.7739415	1.0353119	0.5174386	0.6434772	Y	1.4497162	0.9173991
13773	129	183331	183332	1	  31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.462820	3.303553	1.1190646	1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs	C	carbon monoxide dehydrogenase medium subunit, conjectural	1.316153	2.924738	1.0230458	287	Prephenate dehydrogenase	E	chorismate mutase, conjectural	 0.000000e+00	 0	2.151112e-02	-1.545387e-03	 4.878402e-02	-1.871765e-01	1.233242e+00	0	14	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4680465	0.4271864	N	0.5492530	0.6245624
13773	129	183332	183333	1	  68	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.316153	2.924738	1.0230458	287	Prephenate dehydrogenase	E	chorismate mutase, conjectural	1.368881	2.950179	1.0056356	-	-	-	paREP5	 0.000000e+00	 0	2.780171e-03	 1.115894e-02	 1.220538e-01	 6.038176e-01	5.515108e-02		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7209710	0.6221915	U	0.4686274	0.6162291
13773	129	183333	183334	1	  47	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.368881	2.950179	1.0056356	-	-	-	paREP5	1.473587	3.230653	1.0736542	-	-	-	hypothetical protein	 0.000000e+00	 0	1.096353e-02	-1.831324e-03	-1.671341e-02	-2.021276e-01	9.425236e-01		 0	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4635213	0.4432769	U	0.4686274	0.6162291
13773	129	183334	183335	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.473587	3.230653	1.0736542	-	-	-	hypothetical protein	1.403994	3.144571	1.1070971	-	-	-	hypothetical protein	 0.000000e+00	 0	4.843274e-03	-1.052001e-03	 1.289189e-02	-1.141754e-01	4.623583e-01		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4869848	0.5012753	U	0.4686274	0.6162291
13773	129	183335	183336	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.403994	3.144571	1.1070971	-	-	-	hypothetical protein	1.342092	3.070925	1.0454422	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	3.831832e-03	 5.180762e-03	 1.059459e-01	 3.097804e-01	1.960933e-01		 0	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5961544	0.5808669	U	0.4686274	0.6162291
13773	129	183336	183337	1	  63	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.342092	3.070925	1.0454422	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.466755	3.429259	1.1229906	2445	Uncharacterized conserved protein	S	paREP11	 0.000000e+00	 0	1.554092e-02	-1.679117e-03	-2.863439e-02	-1.951869e-01	1.120056e+00		 0	 0	FALSE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4658104	0.4318248	U	0.4686274	0.6162291
13773	129	183337	183338	1	 114	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.466755	3.429259	1.1229906	2445	Uncharacterized conserved protein	S	paREP11	1.378838	3.049121	1.0213795	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	7.729512e-03	-1.114619e-03	 2.047459e-02	-1.407756e-01	6.882759e-01		 0	 0	FALSE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4794084	0.4656959	U	0.4686274	0.6162291
13773	129	183338	183339	1	  13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.378838	3.049121	1.0213795	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.293448	3.092088	1.0480252	-	-	-	hypothetical protein	 0.000000e+00	 0	7.291336e-03	 1.145972e-02	 2.047112e-01	 5.658269e-01	1.328919e-01		 0	 0	FALSE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7055552	0.5976378	U	0.4686274	0.6162291
13773	129	183339	183340	1	   2	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.293448	3.092088	1.0480252	-	-	-	hypothetical protein	1.387150	3.304277	1.0836107	-	-	-	hypothetical protein	 0.000000e+00	 0	8.779990e-03	 1.014684e-02	 8.650650e-02	 5.071159e-01	1.814250e-01		 0	 0	FALSE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6753423	0.5847453	U	0.4686274	0.6162291
13773	129	183340	183341	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.387150	3.304277	1.0836107	-	-	-	hypothetical protein	1.412275	3.209849	1.1254023	-	-	-	hypothetical protein	 0.000000e+00	 0	6.312652e-04	 2.513061e-03	 4.352614e-02	 1.542512e-01	5.733507e-02		 0	 0	FALSE	 TRUE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5318676	0.6213153	U	0.4686274	0.6162291
13773	129	183341	183342	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.412275	3.209849	1.1254023	-	-	-	hypothetical protein	1.377640	3.011469	1.0774165	-	-	-	hypothetical protein	 0.000000e+00	 0	1.199590e-03	 2.885078e-03	 6.439854e-02	 1.759044e-01	9.852757e-02		 0	 0	FALSE	 TRUE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5406204	0.6071648	U	0.4686274	0.6162291
13773	129	183342	183343	1	  67	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.377640	3.011469	1.0774165	-	-	-	hypothetical protein	1.355697	3.092286	1.0266367	1100	GTPase SAR1 and related small G proteins	R	conserved within P. aerophilum	 0.000000e+00	 0	4.814905e-04	 7.057883e-03	 1.127028e-01	 4.515961e-01	2.015833e-02		 0	 0	FALSE	 TRUE	 91	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6570601	0.6373715	U	0.4686274	0.6162291
13773	129	183343	183344	1	  64	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.355697	3.092286	1.0266367	1100	GTPase SAR1 and related small G proteins	R	conserved within P. aerophilum	1.347803	2.998141	1.0292774	1605	Chorismate mutase	E	3-dehydroquinate dehydratase (aroD) / possible chorismate mutase (multidomain protein)	 0.000000e+00	 0	6.231609e-05	 9.913160e-03	 1.406402e-01	 5.925767e-01	2.191648e-03		 0	 0	 TRUE	 TRUE	 92	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7172616	0.6499017	U	0.4686274	0.6162291
13773	129	183344	183345	1	  12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.347803	2.998141	1.0292774	1605	Chorismate mutase	E	3-dehydroquinate dehydratase (aroD) / possible chorismate mutase (multidomain protein)	1.387474	2.977815	1.0316833	-	-	-	hypothetical protein	 0.000000e+00	 0	1.573843e-03	 6.621312e-03	 8.128001e-02	 4.159608e-01	7.256470e-02		 0	 0	FALSE	 TRUE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6422065	0.6171587	U	0.4686274	0.6162291
13773	129	183345	183346	1	  14	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.387474	2.977815	1.0316833	-	-	-	hypothetical protein	1.385555	2.995631	1.0307750	436	Aspartate/tyrosine/aromatic aminotransferase	E	aspartate aminotransferase (aspC), conjectural	 0.000000e+00	 0	3.684698e-06	 4.208256e-03	 7.057433e-02	 2.864256e-01	4.953443e-04		 0	 1	FALSE	 TRUE	 90	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5871701	0.6533218	U	0.4686274	0.6162291
13773	129	183346	183347	1	  18	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.385555	2.995631	1.0307750	436	Aspartate/tyrosine/aromatic aminotransferase	E	aspartate aminotransferase (aspC), conjectural	1.269091	2.483239	1.1433151	-	-	-	hypothetical protein	 0.000000e+00	 0	1.356383e-02	 1.200238e-02	 2.344629e-01	 5.351085e-01	1.873568e-01		 1	 0	 TRUE	 TRUE	 91	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6889212	0.5834990	U	0.4686274	0.6162291
13773	129	183347	183348	1	 367	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.269091	2.483239	1.1433151	-	-	-	hypothetical protein	1.417608	3.177083	1.0871699	1685	Archaeal shikimate kinase	EH	conserved hypothetical protein	 0.000000e+00	 0	2.205717e-02	 6.159113e-03	 1.125256e-02	 2.337342e-01	5.484863e-01		 0	 6	FALSE	 TRUE	 90	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5628807	0.4839135	U	0.4686274	0.6162291
13773	129	183348	183349	1	 -21	Convergent	+	-	 0.000000	0	  0.000000	 -0.13150953	1.417608	3.177083	1.0871699	1685	Archaeal shikimate kinase	EH	conserved hypothetical protein	1.391332	3.007257	1.0597570	1501	Alpha-glucosidases, family 31 of glycosyl hydrolases	G	alpha-glucosidase	 9.602737e-03	 6	6.903805e-04	 2.029154e-03	 5.072506e-02	 1.172334e-01	6.375334e-02		 6	11	 TRUE	 TRUE	 91	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7537284	0.5930262	0.5215979	0.6194066	U	0.4686274	0.5537552
13773	129	183349	183350	1	  19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.391332	3.007257	1.0597570	1501	Alpha-glucosidases, family 31 of glycosyl hydrolases	G	alpha-glucosidase	1.321463	2.835618	0.9666847	4847	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	4.881693e-03	 7.803609e-03	 1.456902e-01	 4.387773e-01	1.617237e-01		11	 0	FALSE	 TRUE	 90	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6514649	0.5896102	U	0.4686274	0.6162291
13773	129	183350	183351	1	  71	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.321463	2.835618	0.9666847	4847	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.461788	3.235904	1.1007424	87	Ribosomal protein L3	J	ribosomal protein L3	 0.000000e+00	 0	1.969113e-02	-1.350698e-03	-3.765175e-02	-1.782533e-01	1.194349e+00		 0	12	FALSE	 TRUE	 89	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4711743	0.4283385	U	0.4686274	0.6162291
13773	129	183351	183352	1	  20	Same	+	+	27.817261	0	 40.873960	 40.87395955	1.461788	3.235904	1.1007424	87	Ribosomal protein L3	J	ribosomal protein L3	1.392356	3.059263	1.0425174	88	Ribosomal protein L4	J	ribosomal protein L4	 4.432379e-01	12	4.820836e-03	-6.137226e-04	 2.213844e-02	-9.617101e-02	4.644480e-01	J	12	12	 TRUE	 TRUE	 90	 TRUE	2.1902422	2.0205540	0.5480306	2.2661939	0.7776747	1.2514686	0.4933724	0.5005273	Y	1.4497162	0.9331582
13773	129	183352	183353	1	  -3	Same	+	+	24.598385	0	 37.655084	 37.65508372	1.392356	3.059263	1.0425174	88	Ribosomal protein L4	J	ribosomal protein L4	1.407059	3.059095	1.0607815	89	Ribosomal protein L23	J	ribosomal protein L23	 2.129022e-01	12	2.161582e-04	 2.617347e-03	 4.748092e-02	 1.627509e-01	2.081742e-02	J	12	18	 TRUE	 TRUE	 91	 TRUE	2.2492296	2.0086432	0.5480306	2.3151815	0.7776747	1.1509717	0.5355344	0.6371410	Y	1.4497162	0.9317417
13773	129	183353	183354	1	 716	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.407059	3.059095	1.0607815	89	Ribosomal protein L23	J	ribosomal protein L23	1.355131	2.946430	1.0129842	-	-	-	hypothetical protein	 0.000000e+00	 0	2.696487e-03	 4.267708e-03	 8.917749e-02	 2.531969e-01	1.698477e-01		18	 0	 TRUE	 TRUE	 92	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5709825	0.5877478	U	0.4686274	0.6162291
13773	129	183354	183355	1	  31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.355131	2.946430	1.0129842	-	-	-	hypothetical protein	1.442374	3.079690	1.0519854	1096	Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)	J	conserved protein (RNA polymerase related?)	 0.000000e+00	 0	7.611380e-03	 8.681660e-04	 7.563052e-03	-8.056265e-03	5.784402e-01		 0	 4	FALSE	 TRUE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191732	0.4799478	U	0.4686274	0.6162291
13773	129	183355	183356	1	  57	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.442374	3.079690	1.0519854	1096	Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)	J	conserved protein (RNA polymerase related?)	1.572427	3.594624	1.1483798	3286	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	1.691385e-02	-1.091583e-03	 4.497017e-02	 8.682956e-03	6.358318e-01		 4	 0	FALSE	 TRUE	 90	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190059	0.4717106	U	0.4686274	0.6162291
13773	129	183356	183357	1	 103	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.572427	3.594624	1.1483798	3286	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.628920	3.608032	1.0894302	1761	DNA-directed RNA polymerase, subunit L	K	DNA-directed RNA polymerase subunit L (rpoL)	 0.000000e+00	 0	3.191382e-03	 2.148686e-02	 3.148005e-01	 7.318491e-01	9.499891e-03		 0	 3	 TRUE	 TRUE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7621592	0.6431205	U	0.4686274	0.6162291
13773	129	183357	183358	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.37231642	1.628920	3.608032	1.0894302	1761	DNA-directed RNA polymerase, subunit L	K	DNA-directed RNA polymerase subunit L (rpoL)	1.459890	3.271505	1.0598707	1756	Uncharacterized conserved protein	S	conserved hypothetical protein	 9.813788e-02	 3	2.857090e-02	 1.508537e-03	-4.147526e-02	 1.647182e-01	5.237627e-01		 3	 8	 TRUE	 TRUE	 92	 TRUE	0.4469764	0.2462769	0.5480306	0.4469764	0.7136133	1.0055065	0.5363646	0.4888416	U	0.4686274	0.5401990
13773	129	183358	183359	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.459890	3.271505	1.0598707	1756	Uncharacterized conserved protein	S	conserved hypothetical protein	1.520250	3.311515	1.1189637	-	-	-	hypothetical protein	 0.000000e+00	 0	3.643301e-03	 5.851158e-04	 3.943629e-02	 1.133484e-01	1.947363e-01		 8	 0	 TRUE	 TRUE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5204559	0.5814495	U	0.4686274	0.6162291
13773	129	183359	183360	1	  41	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.520250	3.311515	1.1189637	-	-	-	hypothetical protein	1.489281	3.132496	1.0144296	1404	Subtilisin-like serine proteases	O	aerolysin, part 1, authentic frameshift	 0.000000e+00	 0	9.590984e-04	 2.608862e-03	 4.284606e-02	 2.726102e-01	3.449387e-02		 0	 0	 TRUE	 TRUE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5816210	0.6302077	U	0.4686274	0.6162291
13773	129	183360	183361	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.489281	3.132496	1.0144296	1404	Subtilisin-like serine proteases	O	aerolysin, part 1, authentic frameshift	1.473424	3.340580	1.1124382	1404	Subtilisin-like serine proteases	O	aerolysin, part 2, authentic frameshift	 0.000000e+00	 0	2.514311e-04	 8.347243e-04	 2.808469e-02	 1.312692e-01	1.887197e-02	O	 0	 0	 TRUE	 TRUE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5246621	0.6382319	Y	1.4497162	0.7118045
13773	129	183361	183362	1	  29	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.473424	3.340580	1.1124382	1404	Subtilisin-like serine proteases	O	aerolysin, part 2, authentic frameshift	1.432431	3.044025	1.0582203	65	3-isopropylmalate dehydratase large subunit	E	3-isopropylmalate dehydratase large subunit (leuC)	 0.000000e+00	 0	1.680441e-03	-4.177546e-04	 1.553363e-02	-2.579324e-02	1.490209e-01	0	 0	43	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5136638	0.5934994	N	0.5492530	0.6245624
13773	129	183362	183363	1	  10	Convergent	+	-	 0.000000	0	  0.000000	 -7.08527530	1.432431	3.044025	1.0582203	65	3-isopropylmalate dehydratase large subunit	E	3-isopropylmalate dehydratase large subunit (leuC)	1.396797	3.062799	1.0847578	78	Ornithine carbamoyltransferase	E	ornithine carbamoyltransferase (argF)	 1.099180e-01	43	1.269777e-03	 1.035233e-03	 3.949834e-02	 3.892075e-02	1.345758e-01	E	43	59	 TRUE	 TRUE	 97	FALSE	0.4469764	0.1795239	0.5480306	0.4469764	0.7726613	1.0448097	0.5181027	0.5971986	Y	1.4497162	0.6240288
13773	129	183363	183364	1	  46	Same	-	-	 0.000000	0	  0.000000	 -0.29856362	1.396797	3.062799	1.0847578	78	Ornithine carbamoyltransferase	E	ornithine carbamoyltransferase (argF)	1.418096	3.020204	1.0333797	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA) with possible unusual start codon	 9.399069e-03	 3	4.536417e-04	 1.817867e-03	 3.723870e-02	 1.063370e-01	4.750593e-02	E	59	 3	FALSE	 TRUE	 96	 TRUE	0.4469764	0.2552514	0.5480306	0.4469764	0.7136133	0.5898397	0.5194917	0.6249782	Y	1.4497162	0.6463811
13773	129	183364	183365	1	 155	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.418096	3.020204	1.0333797	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA) with possible unusual start codon	1.458473	3.153247	1.0850293	5270	PUA domain (predicted RNA-binding domain)	J	conserved hypothetical protein	 2.301138e-03	 3	1.630269e-03	-2.357328e-04	 1.529322e-02	-3.766855e-02	1.562160e-01	0	 3	 4	FALSE	 TRUE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5002879	0.5096263	0.5909581	N	0.5492530	0.6245624
13773	129	183365	183366	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.458473	3.153247	1.0850293	5270	PUA domain (predicted RNA-binding domain)	J	conserved hypothetical protein	1.446318	3.195453	1.0635771	1913	Predicted Zn-dependent proteases	R	conserved hypothetical protein	 0.000000e+00	 0	1.477301e-04	-3.592748e-05	 2.025573e-02	 7.016690e-03	1.360813e-02		 4	 0	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192720	0.6412444	U	0.4686274	0.6162291
13773	129	183366	183367	1	 -17	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.446318	3.195453	1.0635771	1913	Predicted Zn-dependent proteases	R	conserved hypothetical protein	1.483172	3.264785	1.0878269	66	3-isopropylmalate dehydratase small subunit	E	3-isopropylmalate dehydratase small subunit (leuD)	 0.000000e+00	 0	1.358207e-03	-1.612696e-04	 2.135137e-02	 1.712207e-02	1.208670e-01		 0	14	 TRUE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179242	0.6007310	U	0.4686274	0.6162291
13773	129	183367	183368	1	 149	Divergent	-	+	 1.504077	0	  1.504077	  1.30802934	1.483172	3.264785	1.0878269	66	3-isopropylmalate dehydratase small subunit	E	3-isopropylmalate dehydratase small subunit (leuD)	1.408013	3.027470	1.0769523	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA) with possible unusual start codon	 3.889664e-02	 7	5.648848e-03	-1.378569e-03	 6.833218e-03	-1.291665e-01	5.204355e-01	E	14	 7	FALSE	 TRUE	 96	FALSE	2.9322497	1.6400368	0.5480306	2.9467151	0.7596462	0.7986660	0.4819832	0.4892985	Y	1.4497162	0.8868967
13773	129	183368	183369	1	  94	Same	+	+	 2.197225	0	  2.197225	  1.87601338	1.408013	3.027470	1.0769523	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA) with possible unusual start codon	1.475207	3.088807	1.0779513	473	Isocitrate/isopropylmalate dehydrogenase	CE	3-isopropylmalate dehydrogenase (leuB)	 2.013797e-02	 7	4.514969e-03	-1.033037e-03	 5.320451e-03	-1.056126e-01	4.225499e-01		 7	42	 TRUE	 TRUE	 97	 TRUE	2.9321590	1.6474476	0.5480306	2.9469979	0.7596462	0.6815325	0.4893097	0.5083822	U	0.4686274	0.8373020
13773	129	183369	183370	1	  54	Same	+	+	 0.000000	0	  0.000000	 -1.36015756	1.475207	3.088807	1.0779513	473	Isocitrate/isopropylmalate dehydrogenase	CE	3-isopropylmalate dehydrogenase (leuB)	1.419463	3.043843	1.0649524	334	Glutamate dehydrogenase/leucine dehydrogenase	E	glutamate dehydrogenase	 3.954409e-03	12	3.107391e-03	-7.603794e-04	 1.299608e-02	-7.220954e-02	2.977490e-01		42	12	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.2038444	0.5480306	0.4469764	0.7776747	0.5351157	0.5006836	0.5430248	U	0.4686274	0.5267444
13773	129	183370	183371	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.419463	3.043843	1.0649524	334	Glutamate dehydrogenase/leucine dehydrogenase	E	glutamate dehydrogenase	1.419355	3.099195	1.0019751	-	-	-	hypothetical protein	 0.000000e+00	 0	1.168540e-08	 1.022984e-03	 3.271626e-02	 5.125665e-02	2.355978e-06		12	 0	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187855	0.6559187	U	0.4686274	0.6162291
13773	129	183371	183372	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.419355	3.099195	1.0019751	-	-	-	hypothetical protein	1.397746	2.983806	1.0393278	4900	Predicted metallopeptidase	R	conserved hypothetical protein	 0.000000e+00	 0	4.669537e-04	 1.718764e-03	 4.553609e-02	 1.004212e-01	4.617716e-02		 0	 1	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187636	0.6255200	U	0.4686274	0.6162291
13773	129	183372	183373	1	  59	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.397746	2.983806	1.0393278	4900	Predicted metallopeptidase	R	conserved hypothetical protein	1.405389	3.234286	1.0995264	765	ABC-type amino acid transport system, permease component	E	glutamine transport system permease protein, putative	 5.071901e-03	 1	5.841659e-05	 2.468005e-03	 4.766009e-02	 1.591133e-01	6.743397e-03		 1	23	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5434219	0.5342321	0.6447284	U	0.4686274	0.6162291
13773	129	183373	183374	1	   3	Same	+	+	20.495439	0	 35.357325	 33.07915474	1.405389	3.234286	1.0995264	765	ABC-type amino acid transport system, permease component	E	glutamine transport system permease protein, putative	1.444836	3.275088	1.1419804	1126	ABC-type polar amino acid transport system, ATPase component	E	glutamine transport ATP-binding	 1.453558e-01	23	1.556131e-03	 3.016236e-04	 1.899893e-02	-1.187825e-02	1.544013e-01	E	23	51	 TRUE	 TRUE	 98	 TRUE	2.3730407	1.9935606	0.5480306	2.3371131	0.7771174	1.0856663	0.5180339	0.5918248	Y	1.4497162	0.9295102
13773	129	183374	183375	1	  23	Same	+	+	 0.000000	0	  0.000000	 -1.53043985	1.444836	3.275088	1.1419804	1126	ABC-type polar amino acid transport system, ATPase component	E	glutamine transport ATP-binding	1.389002	2.968571	1.0495022	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase	 7.758740e-03	15	3.117525e-03	 4.090637e-04	 3.529687e-02	-1.676631e-02	2.927449e-01	0	51	15	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.2012185	0.5480306	0.4469764	0.7783720	0.5778415	0.5163266	0.5451177	N	0.5492530	0.5347240
13773	129	183375	183376	1	  28	Same	+	+	 0.000000	0	  0.000000	 -0.95890868	1.389002	2.968571	1.0495022	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase	1.406020	2.958161	1.0205356	84	Mg-dependent DNase	L	conserved hypothetical protein	-4.410233e-02	15	2.896148e-04	 2.830887e-03	 4.917990e-02	 1.785807e-01	2.451159e-02	0	15	51	 TRUE	 TRUE	100	 TRUE	0.4469764	0.2125161	0.5480306	0.4469764	0.7783720	0.5246345	0.5419359	0.6356211	N	0.5492530	0.5383034
13773	129	183376	183377	1	 -12	Same	+	+	 0.000000	0	  0.000000	 -0.34959831	1.406020	2.958161	1.0205356	84	Mg-dependent DNase	L	conserved hypothetical protein	1.375240	2.974991	1.0365255	639	Diadenosine tetraphosphatase and related serine/threonine protein phosphatases	T	serine/threonine specific protein phosphatase	 2.241257e-03	 5	9.473774e-04	 3.455287e-03	 7.063691e-02	 2.212027e-01	7.718418e-02	0	51	 5	 TRUE	 TRUE	101	 TRUE	0.4469764	0.2482804	0.5480306	0.4469764	0.7448207	0.4990423	0.5578490	0.6158124	N	0.5492530	0.5496068
13773	129	183377	183378	1	 226	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.375240	2.974991	1.0365255	639	Diadenosine tetraphosphatase and related serine/threonine protein phosphatases	T	serine/threonine specific protein phosphatase	1.458630	3.303181	1.1568755	-	-	-	P. aerophilum family 59 protein	 0.000000e+00	 0	6.953781e-03	-5.510922e-04	-3.000305e-04	-1.019078e-01	6.260781e-01		 5	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4903462	0.4737580	U	0.4686274	0.6162291
13773	129	183378	183379	1	   1	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.458630	3.303181	1.1568755	-	-	-	P. aerophilum family 59 protein	1.514704	3.665746	1.1543802	-	-	-	P. aerophilum family 3 protein	 0.000000e+00	 0	3.144362e-03	 4.581633e-04	 3.614083e-02	 9.581820e-02	1.847086e-01		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180994	0.5840258	U	0.4686274	0.6162291
13773	129	183379	183380	1	  38	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.514704	3.665746	1.1543802	-	-	-	P. aerophilum family 3 protein	1.383919	3.010483	1.0000735	717	Deoxycytidine deaminase	F	deoxycytidine triphosphate deaminase	 0.000000e+00	 0	1.710483e-02	-4.271875e-03	-2.782765e-02	-3.292331e-01	1.318179e+00		 0	31	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4328030	0.4234192	U	0.4686274	0.6162291
13773	129	183380	183381	1	  93	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.383919	3.010483	1.0000735	717	Deoxycytidine deaminase	F	deoxycytidine triphosphate deaminase	1.338977	3.047865	1.0755187	-	-	-	hypothetical protein	 0.000000e+00	 0	2.019749e-03	 7.585157e-03	 1.299562e-01	 4.663069e-01	7.933107e-02		31	 0	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6627836	0.6149078	U	0.4686274	0.6162291
13773	129	183381	183382	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.338977	3.047865	1.0755187	-	-	-	hypothetical protein	1.559866	3.593062	1.1452187	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	 0.000000e+00	 0	4.879208e-02	-1.219413e-02	-1.240509e-01	-6.515433e-01	2.609849e+00		 0	 1	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3898340	0.4027255	U	0.4686274	0.6162291
13773	129	183382	183383	1	  43	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.559866	3.593062	1.1452187	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	1.347212	3.054050	1.0514460	350	Methylated DNA-protein cysteine methyltransferase	L	methylated-DNA--[protein]-cysteine S-methyltransferase (ogt)	 0.000000e+00	 0	4.522204e-02	-1.130090e-02	-1.137137e-01	-6.205174e-01	2.482499e+00	0	 1	 0	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3926486	0.4035174	N	0.5492530	0.6245624
13773	129	183383	183384	1	  37	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.347212	3.054050	1.0514460	350	Methylated DNA-protein cysteine methyltransferase	L	methylated-DNA--[protein]-cysteine S-methyltransferase (ogt)	1.356222	2.723797	0.9973212	1141	Ferredoxin	C	ferredoxin	 0.000000e+00	 0	8.119344e-05	 9.914976e-03	 1.321046e-01	 5.941776e-01	2.886073e-03	0	 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7180828	0.6487603	N	0.5492530	0.6245624
13773	129	183384	183385	1	 197	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.356222	2.723797	0.9973212	1141	Ferredoxin	C	ferredoxin	1.404118	3.429374	1.1115850	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.293946e-03	 4.499215e-03	 5.601806e-02	 2.790921e-01	1.365538e-01		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5840161	0.5967244	U	0.4686274	0.6162291
13773	129	183385	183386	1	  32	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.404118	3.429374	1.1115850	-	-	-	conserved within P. aerophilum	1.368379	3.034855	1.0418102	560	Phosphoserine phosphatase	E	phosphoserine phosphatase (serB)	 0.000000e+00	 0	1.277270e-03	 3.924525e-03	 7.844932e-02	 2.526215e-01	8.935649e-02		 0	 4	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5703459	0.6112026	U	0.4686274	0.6162291
13773	129	183386	183387	1	  82	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.368379	3.034855	1.0418102	560	Phosphoserine phosphatase	E	phosphoserine phosphatase (serB)	1.386117	2.965008	1.0348200	704	Phosphate uptake regulator	P	conserved hypothetical protein	 0.000000e+00	 0	3.146414e-04	 5.418846e-03	 7.741645e-02	 3.635474e-01	1.803795e-02	0	 4	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6170084	0.6386975	N	0.5492530	0.6245624
13773	129	183387	183388	1	 -15	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.386117	2.965008	1.0348200	704	Phosphate uptake regulator	P	conserved hypothetical protein	1.443578	3.473261	1.1574482	4089	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.301758e-03	 5.101445e-04	 1.603678e-02	-1.200783e-02	3.155973e-01		 0	 4	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179784	0.5371275	U	0.4686274	0.6162291
13773	129	183388	183389	1	 238	Convergent	+	-	 0.000000	0	  0.000000	 -0.24929257	1.443578	3.473261	1.1574482	4089	Predicted membrane protein	S	conserved hypothetical protein	1.463064	3.166614	1.0485768	1731	Archaeal riboflavin synthase	H	conserved hypothetical protein	 6.304986e-02	 4	3.797261e-04	-9.121395e-05	 1.986202e-02	 4.645988e-03	3.477953e-02		 4	 9	 TRUE	 TRUE	109	FALSE	0.4469764	0.2655387	0.5480306	0.4469764	0.7323301	0.8982713	0.5195297	0.6300598	U	0.4686274	0.5462885
13773	129	183389	183390	1	  46	Divergent	-	+	 0.000000	0	  0.000000	 -0.35132529	1.463064	3.166614	1.0485768	1731	Archaeal riboflavin synthase	H	conserved hypothetical protein	1.406282	3.024056	1.0717720	864	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-bin	K	conserved (helix-turn-helix protein, copG family)	 9.393202e-02	 5	3.224224e-03	-5.265062e-04	 1.940357e-02	-7.257353e-02	3.095902e-01	0	 9	 5	FALSE	 TRUE	108	FALSE	0.4469764	0.2478821	0.5480306	0.4469764	0.7448207	0.9882295	0.5005995	0.5385067	N	0.5492530	0.5494812
13773	129	183390	183391	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.406282	3.024056	1.0717720	864	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-bin	K	conserved (helix-turn-helix protein, copG family)	1.370992	2.920691	0.9731549	1310	Predicted metal-dependent protease of the PAD1/JAB1 superfamily	R	conserved hypothetical protein	 9.520652e-04	 1	1.245368e-03	 3.626942e-03	 7.439309e-02	 2.275927e-01	9.423910e-02		 5	 1	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4684288	0.5607909	0.6091015	U	0.4686274	0.6162291
13773	129	183391	183392	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.370992	2.920691	0.9731549	1310	Predicted metal-dependent protease of the PAD1/JAB1 superfamily	R	conserved hypothetical protein	1.435646	3.057442	1.0886317	6	Xaa-Pro aminopeptidase	E	xaa-Pro dipeptidase, putative	 3.796057e-03	 1	4.180082e-03	 1.266076e-03	 1.975467e-02	 3.667609e-02	3.583442e-01		 1	18	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5336363	0.5178065	0.5224252	U	0.4686274	0.6162291
13773	129	183392	183393	1	   1	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.435646	3.057442	1.0886317	6	Xaa-Pro aminopeptidase	E	xaa-Pro dipeptidase, putative	1.721545	3.899473	1.0741477	-	-	-	paREP10, authentic frameshift	 0.000000e+00	 0	8.173846e-02	-4.254111e-03	 1.557068e-01	-5.477766e-02	1.068677e+00		18	 0	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5054217	0.4347792	U	0.4686274	0.6162291
13773	129	183393	183394	1	 206	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.721545	3.899473	1.0741477	-	-	-	paREP10, authentic frameshift	1.406225	2.998161	1.0544583	146	N-methylhydantoinase B/acetone carboxylase, alpha subunit	EQ	N-methylhydantoinase B (hyuB)	 0.000000e+00	 0	9.942673e-02	-1.220217e-02	-3.020917e-01	-3.406720e-01	1.758728e+00		 0	 9	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4296366	0.4112734	U	0.4686274	0.6162291
13773	129	183394	183395	1	  -3	Same	-	-	15.017267	0	 17.679854	 17.56793642	1.406225	2.998161	1.0544583	146	N-methylhydantoinase B/acetone carboxylase, alpha subunit	EQ	N-methylhydantoinase B (hyuB)	1.413974	3.118541	1.1080036	145	N-methylhydantoinase A/acetone carboxylase, beta subunit	EQ	N-methylhydantoinase A (hyuA)	 2.468383e-01	 9	6.004228e-05	 1.690134e-03	 3.887407e-02	 9.439342e-02	6.008332e-03		 9	14	FALSE	 TRUE	109	 TRUE	2.5699604	1.8944974	0.5480306	2.6415732	0.7702221	1.1828738	0.5179966	0.6454790	U	0.4686274	0.8805833
13773	129	183395	183396	1	 166	Divergent	-	+	 0.000000	0	  0.000000	 -0.05129329	1.413974	3.118541	1.1080036	145	N-methylhydantoinase A/acetone carboxylase, beta subunit	EQ	N-methylhydantoinase A (hyuA)	1.541617	3.346999	1.0358618	4274	Uncharacterized conserved protein	S	conserved hypothetical protein	 6.432019e-04	 4	1.629271e-02	-3.376091e-03	-1.619811e-03	-1.952322e-01	9.831872e-01		14	 4	FALSE	 TRUE	108	FALSE	0.4469764	0.3080876	0.5480306	0.4469764	0.7323301	0.4592152	0.4656689	0.4410068	U	0.4686274	0.5596885
13773	129	183396	183397	1	 184	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.541617	3.346999	1.0358618	4274	Uncharacterized conserved protein	S	conserved hypothetical protein	1.464333	3.346039	1.0930764	2445	Uncharacterized conserved protein	S	paREP11	 7.562104e-04	 1	5.972818e-03	 1.167483e-03	 1.414096e-02	 1.554115e-01	2.550134e-01		 4	 1	 TRUE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.5324045	0.5607931	U	0.4686274	0.6162291
13773	129	183397	183398	1	 154	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.464333	3.346039	1.0930764	2445	Uncharacterized conserved protein	S	paREP11	1.545768	3.705843	1.1271366	1708	Predicted nucleotidyltransferases	R	hypothetical protein	 0.000000e+00	 0	6.631723e-03	 1.221201e-03	 5.720971e-02	 1.573976e-01	2.643996e-01		 1	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5334844	0.5555494	U	0.4686274	0.6162291
13773	129	183398	183399	1	 267	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.545768	3.705843	1.1271366	1708	Predicted nucleotidyltransferases	R	hypothetical protein	1.392746	3.094628	1.0854128	277	FAD/FMN-containing dehydrogenases	C	D-lactate dehydrogenase	 0.000000e+00	 0	2.341571e-02	-5.534795e-03	-5.786082e-02	-3.467227e-01	1.451812e+00		 0	16	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4286329	0.4183522	U	0.4686274	0.6162291
13773	129	183399	183400	1	 -22	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.392746	3.094628	1.0854128	277	FAD/FMN-containing dehydrogenases	C	D-lactate dehydrogenase	1.497786	3.932899	1.2853988	-	-	-	hypothetical protein	 0.000000e+00	 0	1.103338e-02	-2.720809e-03	-1.434338e-02	-2.340652e-01	9.365724e-01		16	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4559943	0.4438946	U	0.4686274	0.6162291
13773	129	183400	183401	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.497786	3.932899	1.2853988	-	-	-	hypothetical protein	1.417115	3.198279	1.0976221	1721	Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)	R	hypothetical protein	 0.000000e+00	 0	6.507864e-03	-1.590272e-03	-3.381876e-04	-1.210030e-01	5.450813e-01		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4846254	0.4841397	U	0.4686274	0.6162291
13773	129	183401	183402	1	  38	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.417115	3.198279	1.0976221	1721	Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)	R	hypothetical protein	1.357269	2.975451	1.0518900	714	MoxR-like ATPases	R	moxR related protein	 0.000000e+00	 0	3.581461e-03	 3.226372e-03	 7.797550e-02	 1.809391e-01	2.412521e-01		 0	34	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5425270	0.5655296	U	0.4686274	0.6162291
13773	129	183402	183403	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.357269	2.975451	1.0518900	714	MoxR-like ATPases	R	moxR related protein	1.436563	3.395023	1.1588006	-	-	-	hypothetical protein	 0.000000e+00	 0	6.287420e-03	 1.395865e-03	 1.511900e-02	 3.449151e-02	4.760259e-01		34	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175355	0.4973638	U	0.4686274	0.6162291
13773	129	183403	183404	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.436563	3.395023	1.1588006	-	-	-	hypothetical protein	1.420402	3.236499	1.1068495	1305	Transglutaminase-like enzymes, putative cysteine proteases	E	hypothetical protein	 0.000000e+00	 0	2.611708e-04	 4.596005e-04	 2.799199e-02	 1.009595e-02	2.850733e-02		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5188994	0.6338085	U	0.4686274	0.6162291
13773	129	183404	183405	1	 329	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.420402	3.236499	1.1068495	1305	Transglutaminase-like enzymes, putative cysteine proteases	E	hypothetical protein	1.258337	2.829338	0.9616667	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	2.626501e-02	 5.982979e-03	 1.829022e-01	 2.120150e-01	5.889944e-01	0	 0	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5539805	0.4782490	N	0.5492530	0.6245624
13773	129	183405	183406	1	  43	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.258337	2.829338	0.9616667	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.271709	2.844343	0.9772384	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	 0.000000e+00	 0	1.788000e-04	 3.468906e-02	 4.136747e-01	 9.604808e-01	3.769564e-05	0	 0	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8133759	0.6555210	N	0.5492530	0.6245624
13773	129	183406	183407	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.271709	2.844343	0.9772384	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	1.379731	3.038713	1.0029933	-	-	-	P. aerophilum family 453	 0.000000e+00	 0	1.166888e-02	 1.287645e-02	 1.023425e-01	 5.720897e-01	1.531974e-01		 0	 0	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7087464	0.5924418	U	0.4686274	0.6162291
13773	129	183407	183408	1	 199	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.379731	3.038713	1.0029933	-	-	-	P. aerophilum family 453	1.476817	3.223918	1.0423908	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	 0.000000e+00	 0	9.425664e-03	-1.821945e-03	-1.196482e-02	-1.954902e-01	8.453271e-01		 0	 0	FALSE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4653853	0.4510979	U	0.4686274	0.6162291
13773	129	183408	183409	1	 251	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.476817	3.223918	1.0423908	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	1.403713	2.967773	1.0008978	1831	Predicted metal-dependent hydrolase (urease superfamily)	R	conserved hypothetical protein	 0.000000e+00	 0	5.344226e-03	-1.212228e-03	 1.069571e-02	-1.268252e-01	5.094213e-01		 0	10	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4828296	0.4915849	U	0.4686274	0.6162291
13773	129	183409	183410	1	 829	Convergent	+	-	 0.000000	0	  0.000000	 -0.13353139	1.403713	2.967773	1.0008978	1831	Predicted metal-dependent hydrolase (urease superfamily)	R	conserved hypothetical protein	1.783896	3.804624	1.0039692	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	 2.713081e-03	 4	1.445393e-01	-1.585373e-02	 1.103625e-01	-3.752277e-01	1.870366e+00		10	 4	 TRUE	 TRUE	104	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.7323301	0.5086020	0.4239323	0.4100105	U	0.4686274	0.5517368
13773	129	183410	183411	1	  83	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.783896	3.804624	1.0039692	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	1.414478	3.100956	1.0668300	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	 4.118834e-02	 1	1.364697e-01	-1.227424e-02	-4.000799e-01	-2.622804e-01	1.570665e+00		 4	 1	FALSE	 TRUE	103	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.8108260	0.4490156	0.4150690	U	0.4686274	0.5517368
13773	129	183411	183412	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.414478	3.100956	1.0668300	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	1.307951	2.848233	1.0106608	399	Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogen	M	pleiotropic regulatory protein, conjectural	 9.094140e-03	 1	1.134811e-02	 5.295114e-03	 1.314411e-01	 2.465884e-01	4.396820e-01	0	 1	36	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5875828	0.5680532	0.5054889	N	0.5492530	0.6245624
13773	129	183412	183413	1	  30	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.307951	2.848233	1.0106608	399	Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogen	M	pleiotropic regulatory protein, conjectural	1.295257	3.118622	1.0797144	-	-	-	hypothetical protein	 0.000000e+00	 0	1.611412e-04	 2.239653e-02	 2.922616e-01	 8.872906e-01	7.215181e-04		36	 0	FALSE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8022633	0.6523872	U	0.4686274	0.6162291
13773	129	183413	183414	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.295257	3.118622	1.0797144	-	-	-	hypothetical protein	1.387198	2.847961	0.9837337	2151	Predicted metal-sulfur cluster biosynthetic enzyme	R	conserved hypothetical protein	 0.000000e+00	 0	8.453174e-03	 1.002319e-02	 8.648751e-02	 5.059756e-01	1.814250e-01		 0	12	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6746285	0.5847453	U	0.4686274	0.6162291
13773	129	183414	183415	1	  80	Divergent	-	+	 0.000000	0	  0.000000	 -0.07232066	1.387198	2.847961	0.9837337	2151	Predicted metal-sulfur cluster biosynthetic enzyme	R	conserved hypothetical protein	1.285413	2.779966	1.0089518	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	 2.507089e-02	 1	1.036016e-02	 1.065511e-02	 2.048168e-01	 5.128845e-01	1.927095e-01		12	 1	FALSE	 TRUE	103	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.7074534	0.6789429	0.5822442	U	0.4686274	0.5573725
13773	129	183415	183416	1	   1	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.285413	2.779966	1.0089518	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	1.359422	2.927227	1.1222951	-	-	-	paREP6 part 2, authentic frameshift	 0.000000e+00	 0	5.477295e-03	 1.526540e-02	 1.507441e-01	 7.024288e-01	5.918746e-02		 1	 0	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7527514	0.6207976	U	0.4686274	0.6162291
13773	129	183416	183417	1	  22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.359422	2.927227	1.1222951	-	-	-	paREP6 part 2, authentic frameshift	1.459142	2.758232	1.0981252	-	-	-	paREP6 part 1, authentic frameshift	 0.000000e+00	 0	9.944109e-03	-7.126732e-04	-8.923590e-03	-1.241217e-01	8.035203e-01		 0	 0	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4839099	0.4550988	U	0.4686274	0.6162291
13773	129	183417	183418	1	  47	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.459142	2.758232	1.0981252	-	-	-	paREP6 part 1, authentic frameshift	1.314007	2.782452	0.9558664	1853	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	R	conserved hypothetical protein	 0.000000e+00	 0	2.106404e-02	-1.064583e-03	 5.607059e-02	-1.557761e-01	1.169319e+00		 0	 3	FALSE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4754993	0.4297294	U	0.4686274	0.6162291
13773	129	183418	183419	1	 -62	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.314007	2.782452	0.9558664	1853	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	R	conserved hypothetical protein	1.426612	3.165999	1.0999589	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	conserved hypothetical protein	 0.000000e+00	 0	1.267975e-02	 3.404597e-03	 1.417194e-02	 1.404080e-01	5.714571e-01		 3	 0	 TRUE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5276318	0.4812875	U	0.4686274	0.6162291
13773	129	183419	183420	1	  57	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.426612	3.165999	1.0999589	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	conserved hypothetical protein	1.368517	2.886911	1.0034480	-	-	-	conserved within P. aerophilum, part 2, authentic frameshift	 0.000000e+00	 0	3.375019e-03	 2.053781e-03	 6.063406e-02	 1.037078e-01	2.683606e-01		 0	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191457	0.5545399	U	0.4686274	0.6162291
13773	129	183420	183421	1	   1	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.368517	2.886911	1.0034480	-	-	-	conserved within P. aerophilum, part 2, authentic frameshift	1.483660	3.510503	1.0974938	-	-	-	conserved within P. aerophilum, part 1, authentic frameshift	 0.000000e+00	 0	1.325798e-02	-2.674175e-03	-2.532800e-02	-2.657189e-01	1.139634e+00		 0	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4485097	0.4309702	U	0.4686274	0.6162291
13773	129	183421	183422	1	 574	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.483660	3.510503	1.0974938	-	-	-	conserved within P. aerophilum, part 1, authentic frameshift	1.407760	3.095806	1.0538532	-	-	-	paREP2b	 0.000000e+00	 0	5.760843e-03	-1.407914e-03	 6.466758e-03	-1.310395e-01	5.282155e-01		 0	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4814969	0.4879284	U	0.4686274	0.6162291
13773	129	183422	183423	1	  34	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.407760	3.095806	1.0538532	-	-	-	paREP2b	1.568171	3.543249	1.1725686	-	-	-	paREP2b	 0.000000e+00	 0	2.573167e-02	-5.095382e-03	-9.042345e-03	-2.648779e-01	1.277958e+00		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4486786	0.4250355	U	0.4686274	0.6162291
13773	129	183423	183424	1	 559	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.568171	3.543249	1.1725686	-	-	-	paREP2b	1.329349	2.912124	0.9841845	-	-	-	hypothetical protein	 0.000000e+00	 0	5.703588e-02	-1.425204e-02	-1.427072e-01	-6.953044e-01	2.786312e+00		 0	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3877115	0.4020054	U	0.4686274	0.6162291
13773	129	183424	183425	1	  26	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.329349	2.912124	0.9841845	-	-	-	hypothetical protein	1.311254	2.900915	0.9977396	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	 0.000000e+00	 0	3.274112e-04	 1.710307e-02	 2.327592e-01	 8.015036e-01	2.565660e-03		 0	 3	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7865917	0.6491703	U	0.4686274	0.6162291
13773	129	183425	183426	1	  48	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.311254	2.900915	0.9977396	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	1.378930	3.087426	1.0837209	503	Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins	F	phosphoribosyl transferase	 1.351416e-02	 3	4.579999e-03	 1.015484e-02	 1.029326e-01	 5.428172e-01	1.099205e-01	0	 3	 5	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.7136133	0.6296779	0.6942389	0.6030494	N	0.5492530	0.5604716
13773	129	183426	183427	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.378930	3.087426	1.0837209	503	Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins	F	phosphoribosyl transferase	1.404683	3.191561	1.0883552	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	6.632393e-04	 3.384698e-03	 5.251854e-02	 2.153175e-01	5.022002e-02		 5	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5555393	0.6237799	U	0.4686274	0.6162291
13773	129	183427	183428	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.404683	3.191561	1.0883552	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.415991	3.070358	1.0357811	603	Predicted PP-loop superfamily ATPase	R	conserved hypothetical protein	 0.000000e+00	 0	1.278589e-04	 1.653605e-03	 3.771424e-02	 9.279960e-02	1.238361e-02		 0	40	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179426	0.6418162	U	0.4686274	0.6162291
13773	129	183428	183429	1	  93	Convergent	+	-	 0.000000	0	  0.000000	 -2.64698379	1.415991	3.070358	1.0357811	603	Predicted PP-loop superfamily ATPase	R	conserved hypothetical protein	1.391570	3.135923	1.0795049	388	Predicted amidohydrolase	R	nitrilase, conjectural	-1.750951e-02	35	5.964006e-04	 2.117860e-03	 5.140600e-02	 1.243827e-01	5.551213e-02		40	35	 TRUE	 TRUE	101	FALSE	0.4469764	0.1925809	0.5480306	0.4469764	0.7746280	0.5247111	0.5228914	0.6218902	U	0.4686274	0.5231656
13773	129	183429	183430	1	 165	Divergent	-	+	 0.000000	0	  0.000000	 -0.34620364	1.391570	3.135923	1.0795049	388	Predicted amidohydrolase	R	nitrilase, conjectural	1.382381	3.325655	1.1313695	1280	Putative threonine efflux protein	E	conserved hypothetical protein	 2.349122e-03	 5	8.442681e-05	 4.128504e-03	 7.201555e-02	 2.777003e-01	6.008332e-03		35	 5	FALSE	 TRUE	100	FALSE	0.4469764	0.2486776	0.5480306	0.4469764	0.7448207	0.5028058	0.5835349	0.6454790	U	0.4686274	0.5409586
13773	129	183430	183431	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	 -0.37419068	1.382381	3.325655	1.1313695	1280	Putative threonine efflux protein	E	conserved hypothetical protein	1.359300	3.043313	1.0440068	1801	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.432829e-02	 5	5.327380e-04	 6.355478e-03	 1.044908e-01	 4.117625e-01	2.523782e-02		 5	22	 TRUE	 TRUE	101	FALSE	0.4469764	0.2458726	0.5480306	0.4469764	0.7448207	0.6347855	0.6394046	0.6353762	U	0.4686274	0.5400710
13773	129	183431	183432	1	  77	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.359300	3.043313	1.0440068	1801	Uncharacterized conserved protein	S	conserved hypothetical protein	1.321102	2.915464	1.0112770	-	-	-	hypothetical protein	 0.000000e+00	 0	1.459119e-03	 1.199888e-02	 1.826044e-01	 6.491248e-01	2.824876e-02		22	 0	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7361544	0.6339124	U	0.4686274	0.6162291
13773	129	183432	183433	1	 309	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.321102	2.915464	1.0112770	-	-	-	hypothetical protein	1.426095	3.176603	1.0590192	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	 0.000000e+00	 0	1.102353e-02	 3.296134e-03	 1.779211e-02	 1.447837e-01	5.360532e-01		 0	 8	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5290777	0.4857270	U	0.4686274	0.6162291
13773	129	183433	183434	1	  -3	Same	-	-	 2.079442	0	  2.079442	  2.07944154	1.426095	3.176603	1.0590192	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	1.389548	3.175174	1.0926329	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	 1.389961e-03	 6	1.335620e-03	 1.564551e-03	 4.711850e-02	 8.189908e-02	1.182135e-01	E	 8	 6	FALSE	 TRUE	100	 TRUE	2.9335626	1.6614134	0.5480306	2.9479804	0.7537284	0.4808530	0.5177251	0.6012841	Y	1.4497162	0.8895842
13773	129	183434	183435	1	 -28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.389548	3.175174	1.0926329	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	1.371071	3.057321	1.0761615	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein	 1.150801e-03	 1	3.414139e-04	 4.967446e-03	 8.548939e-02	 3.303134e-01	2.171269e-02	E	 6	 1	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4759583	0.6039397	0.6368386	Y	1.4497162	0.7118045
13773	129	183435	183436	1	  60	Divergent	-	+	 2.197225	0	  2.197225	  2.19722458	1.371071	3.057321	1.0761615	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein	1.456333	3.507683	1.1829865	559	Branched-chain amino acid ABC-type transport system, permease components	E	branched-chain amino acid transport permease protein	 3.777386e-02	 1	7.269628e-03	-3.968193e-04	-2.239006e-04	-9.373080e-02	6.346085e-01	E	 1	 5	FALSE	 TRUE	 98	FALSE	2.9321590	1.6745314	0.5480306	2.9469979	0.6329203	0.7874252	0.4943248	0.4721311	Y	1.4497162	0.8912321
13773	129	183436	183437	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.456333	3.507683	1.1829865	559	Branched-chain amino acid ABC-type transport system, permease components	E	branched-chain amino acid transport permease protein	1.501158	3.463431	1.1958408	4177	ABC-type branched-chain amino acid transport system, permease component	E	branched-chain amino acid transport permease protein	 1.917743e-03	 2	2.009289e-03	 2.458600e-04	 2.983972e-02	 7.379511e-02	1.374059e-01	E	 5	 2	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4923490	0.5179318	0.5963968	Y	1.4497162	0.7118045
13773	129	183437	183438	1	 111	Same	+	+	 0.000000	0	  0.000000	 -0.05918887	1.501158	3.463431	1.1958408	4177	ABC-type branched-chain amino acid transport system, permease component	E	branched-chain amino acid transport permease protein	1.350416	2.859633	0.9730803	450	Peroxiredoxin	O	peroxiredoxin, probable	 3.702577e-04	 2	2.272323e-02	-5.025157e-03	-1.841358e-02	-3.989671e-01	1.664357e+00	0	 2	31	 TRUE	 TRUE	100	 TRUE	0.4469764	0.3056289	0.5480306	0.4469764	0.6838149	0.4473591	0.4195269	0.4130106	N	0.5492530	0.5676209
13773	129	183438	183439	1	 -78	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.350416	2.859633	0.9730803	450	Peroxiredoxin	O	peroxiredoxin, probable	1.413653	3.046322	1.0685605	-	-	-	hypothetical protein	 0.000000e+00	 0	3.998887e-03	 3.810868e-03	 4.301885e-02	 2.125840e-01	2.519223e-01		31	 0	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5543241	0.5619549	U	0.4686274	0.6162291
13773	129	183439	183440	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413653	3.046322	1.0685605	-	-	-	hypothetical protein	1.479886	3.210999	1.1261210	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase family	 0.000000e+00	 0	4.386811e-03	-1.075326e-03	 6.609330e-03	-9.966846e-02	4.067366e-01		 0	40	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4913774	0.5111403	U	0.4686274	0.6162291
13773	129	183440	183441	1	  27	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.479886	3.210999	1.1261210	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase family	1.460910	3.366644	1.1181029	2410	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.600687e-04	 2.711814e-04	 2.207676e-02	 6.812074e-02	3.115780e-02		40	 0	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181773	0.6322033	U	0.4686274	0.6162291
13773	129	183441	183442	1	 668	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.460910	3.366644	1.1181029	2410	Uncharacterized conserved protein	S	conserved hypothetical protein	1.448045	3.094767	1.0820209	665	Glycine/D-amino acid oxidases (deaminating)	E	conserved within P. aerophilum	 0.000000e+00	 0	1.655157e-04	-3.186269e-05	 2.016357e-02	 1.192831e-02	1.526732e-02		 0	 2	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186394	0.6402042	U	0.4686274	0.6162291
13773	129	183442	183443	1	  37	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.448045	3.094767	1.0820209	665	Glycine/D-amino acid oxidases (deaminating)	E	conserved within P. aerophilum	1.349439	3.010427	1.0522078	834	ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	ET	bacterial extracellular solute-binding proteins, family 3	 8.653935e-03	 2	9.723129e-03	 3.413212e-04	 5.109714e-02	-4.971761e-02	7.126832e-01		 2	20	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5848956	0.5067713	0.4634542	U	0.4686274	0.6162291
13773	129	183443	183444	1	  32	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.349439	3.010427	1.0522078	834	ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	ET	bacterial extracellular solute-binding proteins, family 3	1.256819	2.703019	1.0485542	199	Ribosomal protein S14	J	ribosomal protein S14	 3.643202e-02	 8	8.578552e-03	 1.983757e-02	 3.224306e-01	 7.691254e-01	4.198882e-02		20	 8	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7652913	0.7798111	0.7726447	0.6272578	U	0.4686274	0.6162291
13773	129	183444	183445	1	  35	Same	+	+	20.542782	0	 31.402255	 31.40225541	1.256819	2.703019	1.0485542	199	Ribosomal protein S14	J	ribosomal protein S14	1.405787	2.995680	1.0002291	96	Ribosomal protein S8	J	ribosomal protein S8	 3.428670e-02	 8	2.219151e-02	 8.873765e-03	 3.363061e-02	 3.493962e-01	3.979741e-01	J	 8	55	 TRUE	 TRUE	101	 TRUE	2.3591789	1.9828398	0.5480306	2.3935227	0.7652913	0.7662033	0.6125648	0.5130622	Y	1.4497162	0.9287237
13773	129	183445	183446	1	  33	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405787	2.995680	1.0002291	96	Ribosomal protein S8	J	ribosomal protein S8	1.335587	2.905044	1.0004998	1717	Ribosomal protein L32E	J	ribosomal protein L32	 0.000000e+00	 0	4.927981e-03	 5.281440e-03	 1.112650e-01	 3.025923e-01	2.488501e-01	J	55	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5926156	0.5634081	Y	1.4497162	0.7118045
13773	129	183446	183447	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.335587	2.905044	1.0004998	1717	Ribosomal protein L32E	J	ribosomal protein L32	1.410885	2.949979	1.0294990	2147	Ribosomal protein L19E	J	ribosomal protein L19	 0.000000e+00	 0	5.669718e-03	 4.691069e-03	 4.569686e-02	 2.613297e-01	2.994265e-01	J	 0	11	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5746843	0.5419791	Y	1.4497162	0.7118045
13773	129	183447	183448	1	   2	Same	+	+	25.178204	0	 32.982047	 32.98204723	1.410885	2.949979	1.0294990	2147	Ribosomal protein L19E	J	ribosomal protein L19	1.421178	2.985636	1.0521063	256	Ribosomal protein L18	J	ribosomal protein L18	 3.056801e-01	11	1.059481e-04	 1.223953e-03	 3.319983e-02	 6.415739e-02	9.350875e-03	J	11	11	 TRUE	 TRUE	104	 TRUE	2.2337636	1.9903398	0.5480306	2.3762174	0.7764261	1.2244861	0.5183205	0.6432396	Y	1.4497162	0.9303678
13773	129	183448	183449	1	 349	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.421178	2.985636	1.0521063	256	Ribosomal protein L18	J	ribosomal protein L18	1.469440	3.876357	1.1725641	-	-	-	hypothetical protein	 0.000000e+00	 0	2.329263e-03	-5.453033e-04	 1.287056e-02	-5.595682e-02	2.271404e-01		11	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5050583	0.5719932	U	0.4686274	0.6162291
13773	129	183449	183450	1	 277	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.469440	3.876357	1.1725641	-	-	-	hypothetical protein	1.474824	3.172342	0.9978604	-	-	-	paREP2b	 0.000000e+00	 0	2.897991e-05	 4.228645e-04	 2.624899e-02	 8.362778e-02	2.120380e-03		 0	 0	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176871	0.6501030	U	0.4686274	0.6162291
13773	129	183450	183451	1	 125	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.474824	3.172342	0.9978604	-	-	-	paREP2b	1.452525	3.134514	1.0815667	-	-	-	paREP2a	 0.000000e+00	 0	4.972486e-04	 2.651560e-05	 1.965678e-02	 3.460460e-02	4.105055e-02		 0	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175491	0.6277229	U	0.4686274	0.6162291
13773	129	183451	183452	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.452525	3.134514	1.0815667	-	-	-	paREP2a	1.304342	2.670667	0.9358192	-	-	-	paREP2a	 0.000000e+00	 0	2.195811e-02	-1.664116e-04	 7.370306e-02	-1.033049e-01	1.092611e+00		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4900013	0.4334958	U	0.4686274	0.6162291
13773	129	183452	183453	1	  60	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.304342	2.670667	0.9358192	-	-	-	paREP2a	1.385977	2.956623	1.0323009	417	DNA polymerase elongation subunit (family B)	L	DNA-directed DNA polymerase (B3)	 0.000000e+00	 0	6.664224e-03	 9.619536e-03	 8.916497e-02	 5.064810e-01	1.544013e-01		 0	14	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6749852	0.5918248	U	0.4686274	0.6162291
13773	129	183453	183454	1	  52	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.385977	2.956623	1.0323009	417	DNA polymerase elongation subunit (family B)	L	DNA-directed DNA polymerase (B3)	1.616774	3.441170	1.1624721	-	-	-	hypothetical protein	 0.000000e+00	 0	5.326729e-02	-1.081860e-02	-4.716614e-02	-4.827787e-01	2.053051e+00		14	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4077545	0.4075347	U	0.4686274	0.6162291
13773	129	183454	183455	1	  58	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.616774	3.441170	1.1624721	-	-	-	hypothetical protein	1.420553	3.078443	1.0565160	-	-	-	paREP2a	 0.000000e+00	 0	3.850253e-02	-5.100320e-03	-1.059389e-01	-1.901027e-01	1.219643e+00		 0	 0	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4676311	0.4275687	U	0.4686274	0.6162291
13773	129	183455	183456	1	 167	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.420553	3.078443	1.0565160	-	-	-	paREP2a	1.387864	2.954143	1.0206573	358	DNA primase (bacterial type)	L	conserved protein (toprim domain)	 0.000000e+00	 0	1.068569e-03	 1.959221e-03	 5.147937e-02	 1.106885e-01	9.329907e-02		 0	 9	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5200650	0.6097348	U	0.4686274	0.6162291
13773	129	183456	183457	1	 226	Divergent	-	+	 0.000000	0	  0.000000	 -0.85598940	1.387864	2.954143	1.0206573	358	DNA primase (bacterial type)	L	conserved protein (toprim domain)	1.411909	3.047102	1.0656380	24	Methionine aminopeptidase	J	methionine aminopeptidase	 1.690142e-01	 9	5.781534e-04	 2.508374e-03	 4.377613e-02	 1.528935e-01	5.022002e-02	0	 9	22	FALSE	 TRUE	107	FALSE	0.4469764	0.2169492	0.5480306	0.4469764	0.7702221	1.1137802	0.5314662	0.6237799	N	0.5492530	0.5397069
13773	129	183457	183458	1	  41	Same	+	+	 0.000000	0	  0.000000	 -3.04336657	1.411909	3.047102	1.0656380	24	Methionine aminopeptidase	J	methionine aminopeptidase	1.352791	2.914834	1.0256696	459	Chaperonin GroEL (HSP60 family)	O	thermosome (chaperonin) alpha subunit	 3.313658e-02	22	3.494892e-03	 3.893189e-03	 8.698871e-02	 2.245906e-01	2.184468e-01	0	22	51	 TRUE	 TRUE	108	 TRUE	0.4469764	0.1898074	0.5480306	0.4469764	0.7773546	0.7608449	0.5593058	0.5748800	N	0.5492530	0.5311050
13773	129	183458	183459	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.352791	2.914834	1.0256696	459	Chaperonin GroEL (HSP60 family)	O	thermosome (chaperonin) alpha subunit	1.423448	3.372534	1.1474444	-	-	-	hypothetical protein	 0.000000e+00	 0	4.992328e-03	 2.755445e-03	 3.024849e-02	 1.444632e-01	3.277848e-01		51	 0	 TRUE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5289459	0.5314834	U	0.4686274	0.6162291
13773	129	183459	183460	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.423448	3.372534	1.1474444	-	-	-	hypothetical protein	1.473181	3.248711	1.0908342	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	conjugal transfer protein, conjectural	 0.000000e+00	 0	2.473440e-03	-6.088836e-04	 1.284086e-02	-5.644687e-02	2.374973e-01		 0	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5049852	0.5677637	U	0.4686274	0.6162291
13773	129	183460	183461	1	 -28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.473181	3.248711	1.0908342	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	conjugal transfer protein, conjectural	1.570763	3.441985	1.0233026	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB, conjectural	 0.000000e+00	 0	9.522134e-03	 2.600887e-03	 8.612828e-02	 2.399563e-01	2.581233e-01		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5648304	0.5591829	U	0.4686274	0.6162291
13773	129	183461	183462	1	 128	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.570763	3.441985	1.0233026	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB, conjectural	1.461541	3.201038	1.0570635	-	-	-	hypothetical protein	 0.000000e+00	 0	1.192934e-02	 1.211409e-03	-1.022533e-03	 1.577033e-01	3.722592e-01		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5336200	0.5179953	U	0.4686274	0.6162291
13773	129	183462	183463	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.461541	3.201038	1.0570635	-	-	-	hypothetical protein	1.419632	2.970655	0.9944742	1958	Small nuclear ribonucleoprotein (snRNP) homolog	K	small nuclear ribonucleoprotein homolog (Sm-like)	 0.000000e+00	 0	1.756410e-03	-3.223240e-04	 1.926923e-02	-4.325575e-02	1.736644e-01		 0	 2	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5082840	0.5866463	U	0.4686274	0.6162291
13773	129	183463	183464	1	 230	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.419632	2.970655	0.9944742	1958	Small nuclear ribonucleoprotein (snRNP) homolog	K	small nuclear ribonucleoprotein homolog (Sm-like)	1.455468	3.020050	1.0105462	-	-	-	paREP2a	 0.000000e+00	 0	1.284263e-03	-1.294403e-04	 1.670463e-02	-2.968532e-02	1.262621e-01		 2	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5121378	0.5992342	U	0.4686274	0.6162291
13773	129	183464	183465	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.455468	3.020050	1.0105462	-	-	-	paREP2a	1.430078	2.895921	0.9853456	-	-	-	paREP2a	 0.000000e+00	 0	6.446910e-04	-8.686904e-05	 2.083362e-02	-1.540957e-02	6.202126e-02		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5168916	0.6198120	U	0.4686274	0.6162291
13773	129	183465	183466	1	 158	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.430078	2.895921	0.9853456	-	-	-	paREP2a	1.445845	3.126557	1.0264346	-	-	-	paREP2b	 0.000000e+00	 0	2.486105e-04	 1.182566e-04	 2.104473e-02	-4.490788e-03	2.367772e-02		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197446	0.6360087	U	0.4686274	0.6162291
13773	129	183466	183467	1	  44	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.445845	3.126557	1.0264346	-	-	-	paREP2b	1.484311	3.185995	1.1049887	-	-	-	paREP2b	 0.000000e+00	 0	1.479671e-03	-1.826306e-04	 2.127604e-02	 1.580036e-02	1.328919e-01		 0	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181336	0.5976378	U	0.4686274	0.6162291
13773	129	183467	183468	1	  33	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.484311	3.185995	1.1049887	-	-	-	paREP2b	1.461445	3.254641	1.1284559	1201	Lhr-like helicases	R	ATP-dependent helicase, putative	 0.000000e+00	 0	5.228585e-04	 3.309115e-04	 2.211153e-02	 7.807239e-02	4.421934e-02		 0	 5	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178204	0.6262469	U	0.4686274	0.6162291
13773	129	183468	183469	1	 162	Same	-	-	 0.000000	0	  0.000000	 -0.24283734	1.461445	3.254641	1.1284559	1201	Lhr-like helicases	R	ATP-dependent helicase, putative	1.374847	2.960799	1.0438097	1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	C	fumarate hydratase class I beta subunit	 7.445728e-03	 5	7.499337e-03	-7.694765e-04	 2.636396e-02	-1.221551e-01	6.806567e-01		 5	15	FALSE	 TRUE	107	 TRUE	0.4469764	0.2674215	0.5480306	0.4469764	0.7448207	0.5726570	0.4845064	0.4667437	U	0.4686274	0.5468830
13773	129	183469	183470	1	 106	Divergent	-	+	21.432712	0	 47.882868	 47.82402712	1.374847	2.960799	1.0438097	1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	C	fumarate hydratase class I beta subunit	1.537623	3.315732	1.0704778	1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	C	fumarate hydratase class I alpha subunit	 5.041264e-01	15	2.649601e-02	-6.600560e-03	-5.243507e-02	-4.454783e-01	1.787341e+00	C	15	15	FALSE	 TRUE	106	FALSE	2.3308952	2.0390660	0.5480306	2.1909433	0.7783720	1.2594416	0.4124036	0.4109643	Y	1.4497162	0.9335406
13773	129	183470	183471	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.537623	3.315732	1.0704778	1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	C	fumarate hydratase class I alpha subunit	1.388803	3.127042	1.0963674	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	 0.000000e+00	 0	2.214715e-02	-5.397072e-03	-5.130066e-02	-3.588725e-01	1.474090e+00	0	15	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4266057	0.4175856	N	0.5492530	0.6245624
13773	129	183471	183472	1	  30	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.388803	3.127042	1.0963674	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	conserved hypothetical protein	1.422988	2.979057	1.0054856	1853	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	R	hypothetical protein	 0.000000e+00	 0	1.168602e-03	 1.777835e-03	 3.362519e-02	 9.801633e-02	9.997827e-02		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183566	0.6068453	U	0.4686274	0.6162291
13773	129	183472	183473	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.422988	2.979057	1.0054856	1853	Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family	R	hypothetical protein	1.393848	3.105576	1.0364820	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	 0.000000e+00	 0	8.491336e-04	 1.634535e-03	 4.620947e-02	 9.018093e-02	7.591019e-02		 0	 5	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178139	0.6161199	U	0.4686274	0.6162291
13773	129	183473	183474	1	 146	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.393848	3.105576	1.0364820	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	1.401546	3.068322	1.0982005	-	-	-	paREP2a	 0.000000e+00	 0	5.924927e-05	 2.868438e-03	 5.217702e-02	 1.882662e-01	4.356203e-03		 5	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5455462	0.6468997	U	0.4686274	0.6162291
13773	129	183474	183475	1	 171	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.401546	3.068322	1.0982005	-	-	-	paREP2a	1.509941	3.254298	1.0638795	720	6-pyruvoyl-tetrahydropterin synthase	H	hypothetical protein	 0.000000e+00	 0	1.174949e-02	-2.918448e-03	-1.099060e-02	-2.268453e-01	9.336038e-01		 0	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4578554	0.4442659	U	0.4686274	0.6162291
13773	129	183475	183476	1	 104	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.509941	3.254298	1.0638795	720	6-pyruvoyl-tetrahydropterin synthase	H	hypothetical protein	1.385731	2.989898	1.0324793	177	Predicted EndoIII-related endonuclease	L	conserved hypothetical protein	 0.000000e+00	 0	1.542812e-02	-3.844376e-03	-2.196777e-02	-3.077996e-01	1.231538e+00	0	 0	 1	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4381692	0.4273500	N	0.5492530	0.6245624
13773	129	183476	183477	1	 168	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.385731	2.989898	1.0324793	177	Predicted EndoIII-related endonuclease	L	conserved hypothetical protein	1.742999	3.897371	1.0961157	-	-	-	hypothetical protein	 0.000000e+00	 0	1.276407e-01	-1.914748e-02	 1.855965e-03	-5.364508e-01	2.337167e+00		 1	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3998290	0.4048015	U	0.4686274	0.6162291
13773	129	183477	183478	1	 634	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.742999	3.897371	1.0961157	-	-	-	hypothetical protein	1.475479	3.421772	1.1130212	-	-	-	hypothetical protein	 0.000000e+00	 0	7.156683e-02	 7.023763e-03	-1.116103e-01	 3.191543e-01	4.335965e-01		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5992348	0.5065808	U	0.4686274	0.6162291
13773	129	183478	183479	1	 256	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.475479	3.421772	1.1130212	-	-	-	hypothetical protein	1.379814	2.845305	1.0041004	-	-	-	hypothetical protein	 0.000000e+00	 0	9.151858e-03	-1.724082e-03	 1.211719e-02	-1.898482e-01	8.270807e-01		 0	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4677698	0.4523017	U	0.4686274	0.6162291
13773	129	183479	183480	1	 317	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.379814	2.845305	1.0041004	-	-	-	hypothetical protein	1.719035	3.592622	1.0798422	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.150711e-01	-1.915755e-02	-3.435765e-02	-5.708911e-01	2.436762e+00		 0	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3966034	0.4038977	U	0.4686274	0.6162291
13773	129	183480	183481	1	 271	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.719035	3.592622	1.0798422	-	-	-	conserved within P. aerophilum	1.555352	3.241795	1.0717990	-	-	-	conserved hypothetical protein part 2, authentic frameshift	 0.000000e+00	 0	2.679237e-02	 2.782376e-02	 1.915951e-01	 7.454549e-01	4.519295e-02		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7657852	0.6259433	U	0.4686274	0.6162291
13773	129	183481	183482	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.555352	3.241795	1.0717990	-	-	-	conserved hypothetical protein part 2, authentic frameshift	1.683114	3.735403	1.0706577	535	Predicted Fe-S oxidoreductases	R	conserved hypothetical protein part 1, authentic frameshift	 0.000000e+00	 0	1.632335e-02	 2.408947e-02	 4.113117e-01	 7.337339e-01	3.890249e-02		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7630636	0.6284750	U	0.4686274	0.6162291
13773	129	183482	183483	1	   6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.683114	3.735403	1.0706577	535	Predicted Fe-S oxidoreductases	R	conserved hypothetical protein part 1, authentic frameshift	1.654863	3.395133	1.0351028	-	-	-	hypothetical protein	 0.000000e+00	 0	7.981208e-04	 4.714851e-02	 5.407890e-01	 8.996536e-01	6.031303e-04		 0	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8046663	0.6529329	U	0.4686274	0.6162291
13773	129	183483	183484	1	 255	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.654863	3.395133	1.0351028	-	-	-	hypothetical protein	1.406416	3.174674	1.0543200	-	-	-	hypothetical protein	 0.000000e+00	 0	6.172630e-02	-9.151544e-03	-1.862638e-01	-3.247951e-01	1.646583e+00		 0	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4345528	0.4134553	U	0.4686274	0.6162291
13773	129	183484	183485	1	  45	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.406416	3.174674	1.0543200	-	-	-	hypothetical protein	1.471567	3.222173	1.0877802	2848	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.244696e-03	-9.073750e-04	 6.024667e-03	-9.743852e-02	3.941103e-01		 0	 1	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4927210	0.5133624	U	0.4686274	0.6162291
13773	129	183485	183486	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.471567	3.222173	1.0877802	2848	Uncharacterized conserved protein	S	conserved hypothetical protein	1.561607	3.459527	1.1090311	2411	Uncharacterized conserved protein	S	conserved hypothetical protein	 7.562104e-04	 1	8.107146e-03	 2.223463e-03	 7.654909e-02	 2.198834e-01	2.519223e-01		 1	 4	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.5569523	0.5619549	U	0.4686274	0.6162291
13773	129	183486	183487	1	 -34	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.561607	3.459527	1.1090311	2411	Uncharacterized conserved protein	S	conserved hypothetical protein	1.522550	3.319016	1.1295770	1533	DNA repair photolyase	L	conserved hypothetical protein	 4.118834e-02	 1	1.525384e-03	 7.842549e-03	 9.444593e-02	 4.962396e-01	2.216739e-02		 4	 1	 TRUE	 TRUE	107	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.8108260	0.6717928	0.6366745	U	0.4686274	0.5517368
13773	129	183487	183488	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.522550	3.319016	1.1295770	1533	DNA repair photolyase	L	conserved hypothetical protein	1.471518	3.335881	1.1448183	-	-	-	hypothetical protein	 0.000000e+00	 0	2.604283e-03	 1.432078e-03	 2.565196e-02	 1.775759e-01	1.251737e-01		 1	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5412027	0.5995746	U	0.4686274	0.6162291
13773	129	183488	183489	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.471518	3.335881	1.1448183	-	-	-	hypothetical protein	1.431830	3.150398	1.0979931	433	Predicted ATPase	R	conserved within P. aerophilum	 0.000000e+00	 0	1.575170e-03	-3.937135e-04	 1.607759e-02	-2.622792e-02	1.396912e-01		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5133970	0.5958874	U	0.4686274	0.6162291
13773	129	183489	183490	1	  19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.431830	3.150398	1.0979931	433	Predicted ATPase	R	conserved within P. aerophilum	1.443341	3.216731	1.0884292	1339	Transcriptional regulator of a riboflavin/FAD biosynthetic operon	KH	conserved hypothetical protein	 0.000000e+00	 0	1.325042e-04	 1.575200e-04	 2.177221e-02	-1.796433e-03	1.272758e-02		 0	 5	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199667	0.6416331	U	0.4686274	0.6162291
13773	129	183490	183491	1	 -24	Same	-	-	 0.000000	0	  0.000000	 -0.23681685	1.443341	3.216731	1.0884292	1339	Transcriptional regulator of a riboflavin/FAD biosynthetic operon	KH	conserved hypothetical protein	1.468542	3.333280	1.1268670	235	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	G	fuculose-1-phosphate aldolase (fucA)	 3.568164e-03	 5	6.350834e-04	-1.380821e-04	 1.970538e-02	 4.859204e-03	5.479120e-02		 5	19	FALSE	 TRUE	105	 TRUE	0.4469764	0.2687705	0.5480306	0.4469764	0.7448207	0.5299793	0.5195126	0.6224019	U	0.4686274	0.5473089
13773	129	183491	183492	1	  36	Same	-	-	 0.000000	0	  0.000000	 -0.13353139	1.468542	3.333280	1.1268670	235	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	G	fuculose-1-phosphate aldolase (fucA)	1.338453	2.943446	1.0323767	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	 6.872859e-06	 4	1.692309e-02	-1.936797e-03	 2.973777e-02	-2.126388e-01	1.194349e+00	0	19	 4	FALSE	 TRUE	104	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.7323301	0.4389225	0.4610279	0.4283385	N	0.5492530	0.5604716
13773	129	183492	183493	1	  33	Same	-	-	 0.000000	0	  0.000000	 -0.34508363	1.338453	2.943446	1.0323767	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	1.439150	3.089705	1.0509776	2220	Predicted Zn-dependent hydrolases of the beta-lactamase fold	R	conserved hypothetical protein	 5.306036e-02	 4	1.013993e-02	 1.382680e-03	 4.892520e-03	 1.610900e-02	6.730798e-01		 4	29	FALSE	 TRUE	103	 TRUE	0.4469764	0.2490736	0.5480306	0.4469764	0.7323301	0.8617341	0.5180745	0.4678741	U	0.4686274	0.5410839
13773	129	183493	183494	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.439150	3.089705	1.0509776	2220	Predicted Zn-dependent hydrolases of the beta-lactamase fold	R	conserved hypothetical protein	1.378112	3.028547	1.0430548	-	-	-	hypothetical protein	 0.000000e+00	 0	3.725724e-03	 8.971558e-04	 4.448441e-02	 1.147067e-02	3.348527e-01		29	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187480	0.5297247	U	0.4686274	0.6162291
13773	129	183494	183495	1	  21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.378112	3.028547	1.0430548	-	-	-	hypothetical protein	1.518654	3.205375	1.0442966	1591	Holliday junction resolvase - archaeal type	L	Holliday Junction Resolvase	 0.000000e+00	 0	1.975222e-02	-4.928994e-03	-3.904211e-02	-3.670613e-01	1.468505e+00		 0	 3	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4243464	0.4178096	U	0.4686274	0.6162291
13773	129	183495	183496	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.518654	3.205375	1.0442966	1591	Holliday junction resolvase - archaeal type	L	Holliday Junction Resolvase	1.417715	3.166719	1.0499350	-	-	-	hypothetical protein	 0.000000e+00	 0	1.018879e-02	-2.265243e-03	-1.435672e-02	-1.455994e-01	7.243930e-01		 3	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4780369	0.4624347	U	0.4686274	0.6162291
13773	129	183496	183497	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.417715	3.166719	1.0499350	-	-	-	hypothetical protein	1.383164	3.010882	1.0469656	2101	TATA-box binding protein (TBP), component of TFIID and TFIIIB	K	transcription initiation factor TFIID (TATA-binding)	 0.000000e+00	 0	1.193747e-03	 2.297833e-03	 5.654611e-02	 1.328595e-01	1.043940e-01		 0	11	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5252833	0.6046210	U	0.4686274	0.6162291
13773	129	183497	183498	1	  95	Same	-	-	 2.890372	0	  8.496990	  7.63256942	1.383164	3.010882	1.0469656	2101	TATA-box binding protein (TBP), component of TFIID and TFIIIB	K	transcription initiation factor TFIID (TATA-binding)	1.458463	3.056240	1.0817038	442	Prolyl-tRNA synthetase	J	prolyl-tRNA synthetase	 1.886248e-01	11	5.669969e-03	-4.823968e-04	 3.402429e-03	-8.943291e-02	5.182232e-01	0	11	25	FALSE	 TRUE	 98	 TRUE	2.8691690	1.8171790	0.5480306	2.7894437	0.7764261	1.1239927	0.4952488	0.4901366	N	0.5492530	0.8696358
13773	129	183498	183499	1	 483	Same	-	-	 0.000000	0	  0.000000	 -0.70391989	1.458463	3.056240	1.0817038	442	Prolyl-tRNA synthetase	J	prolyl-tRNA synthetase	1.507491	3.318972	1.0940527	2519	tRNA(1-methyladenosine) methyltransferase and related methyltransferases	J	beta-aspartate methyltransferase (pimT), conjectural	 1.137211e-02	17	2.403733e-03	 3.966289e-04	 3.324008e-02	 8.833031e-02	1.550051e-01	J	25	17	FALSE	 TRUE	 97	 TRUE	0.4469764	0.2240998	0.5480306	0.4469764	0.7782882	0.6070414	0.5177380	0.5915122	Y	1.4497162	0.6372571
13773	129	183499	183500	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.507491	3.318972	1.0940527	2519	tRNA(1-methyladenosine) methyltransferase and related methyltransferases	J	beta-aspartate methyltransferase (pimT), conjectural	1.522746	3.603032	1.1515391	-	-	-	hypothetical protein	 0.000000e+00	 0	2.327269e-04	 4.002802e-03	 7.247720e-02	 3.520473e-01	6.870031e-03		17	 0	FALSE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6133912	0.6445676	U	0.4686274	0.6162291
13773	129	183500	183501	1	 390	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.522746	3.603032	1.1515391	-	-	-	hypothetical protein	1.405493	2.958180	0.9913773	4830	Ribosomal protein S26	J	ribosomal protein S26	 0.000000e+00	 0	1.374844e-02	-3.275143e-03	-2.513536e-02	-2.275368e-01	9.877583e-01		 0	 1	FALSE	 TRUE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4577017	0.4404584	U	0.4686274	0.6162291
13773	129	183501	183502	1	 598	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405493	2.958180	0.9913773	4830	Ribosomal protein S26	J	ribosomal protein S26	1.475379	3.269243	1.0758280	-	-	-	paREP2b, degenerate	 0.000000e+00	 0	4.884121e-03	-1.100975e-03	 3.975553e-03	-1.152780e-01	4.623583e-01		 1	 0	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4866333	0.5012753	U	0.4686274	0.6162291
13773	129	183502	183503	1	 -70	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.475379	3.269243	1.0758280	-	-	-	paREP2b, degenerate	1.430815	3.170735	1.0149498	-	-	-	paREP2b, degenerate	 0.000000e+00	 0	1.985986e-03	-4.935927e-04	 1.458076e-02	-3.413812e-02	1.833917e-01		 0	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5108186	0.5843367	U	0.4686274	0.6162291
13773	129	183503	183504	1	 547	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430815	3.170735	1.0149498	-	-	-	paREP2b, degenerate	1.539685	3.484837	1.1195828	1901	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	1.185284e-02	-1.816898e-03	 1.821560e-02	-7.551026e-02	6.705636e-01		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4995700	0.4684793	U	0.4686274	0.6162291
13773	129	183504	183505	1	  37	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.539685	3.484837	1.1195828	1901	Uncharacterized conserved protein	S	hypothetical protein	1.484164	3.488904	1.1327288	558	Phosphatidylglycerophosphate synthase	I	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA)	 0.000000e+00	 0	3.082604e-03	 2.893475e-03	 3.749939e-02	 2.861729e-01	9.708748e-02		 0	 5	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5869258	0.6079718	U	0.4686274	0.6162291
13773	129	183505	183506	1	  49	Same	+	+	 2.856470	0	  2.856470	  2.85647021	1.484164	3.488904	1.1327288	558	Phosphatidylglycerophosphate synthase	I	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA)	1.456859	3.123121	1.0381684	5399	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 1.980709e-02	 2	7.455806e-04	 1.791319e-04	 2.018068e-02	 5.883642e-02	6.492132e-02		 5	 2	 TRUE	 TRUE	100	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6838149	0.6786740	0.5186225	0.6191240	U	0.4686274	0.8518227
13773	129	183506	183507	1	 503	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.456859	3.123121	1.0381684	5399	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.530790	3.331979	1.0675976	-	-	-	conserved hypothetical protein	 3.728161e-04	 1	5.465853e-03	 4.339947e-04	 4.174517e-02	 1.001232e-01	2.877833e-01		 2	 1	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.5186879	0.5479032	U	0.4686274	0.6162291
13773	129	183507	183508	1	 375	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.530790	3.331979	1.0675976	-	-	-	conserved hypothetical protein	1.430142	3.067958	1.0800197	417	DNA polymerase elongation subunit (family B)	L	DNA-directed DNA polymerase (B1)	 5.631536e-04	 1	1.013007e-02	-1.687256e-03	-1.385233e-02	-7.758234e-02	6.346085e-01		 1	 3	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.4986833	0.4721311	U	0.4686274	0.6162291
13773	129	183508	183509	1	  90	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.430142	3.067958	1.0800197	417	DNA polymerase elongation subunit (family B)	L	DNA-directed DNA polymerase (B1)	1.527662	3.242069	1.0621785	-	-	-	hypothetical protein	 0.000000e+00	 0	9.510102e-03	-1.620773e-03	 1.541255e-02	-7.540306e-02	6.044078e-01		 3	 0	FALSE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4996572	0.4764940	U	0.4686274	0.6162291
13773	129	183509	183510	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.527662	3.242069	1.0621785	-	-	-	hypothetical protein	1.478027	3.222044	1.1138417	1257	Hydroxymethylglutaryl-CoA reductase	I	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)	 0.000000e+00	 0	2.463586e-03	 2.031385e-03	 3.151851e-02	 2.328324e-01	9.804636e-02		 0	18	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5624966	0.6073008	U	0.4686274	0.6162291
13773	129	183510	183511	1	  29	Divergent	-	+	 2.856470	0	  2.856470	  2.85647021	1.478027	3.222044	1.1138417	1257	Hydroxymethylglutaryl-CoA reductase	I	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)	1.506781	3.322542	1.1219784	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	 1.939477e-02	 1	8.267676e-04	 1.475232e-03	 4.397579e-02	 1.929952e-01	3.981602e-02	I	18	 1	FALSE	 TRUE	101	FALSE	2.8950318	1.7307027	0.5480306	2.9213001	0.6329203	0.6735730	0.5472558	0.6280980	Y	1.4497162	0.8983990
13773	129	183511	183512	1	  34	Same	+	+	 2.856470	0	  2.856470	  2.85647021	1.506781	3.322542	1.1219784	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	1.419243	3.037429	1.0387677	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	 2.630109e-02	 1	7.662816e-03	-1.780696e-03	-5.248697e-03	-1.254258e-01	6.056017e-01		 1	11	 TRUE	 TRUE	102	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6329203	0.7172240	0.4834309	0.4761308	U	0.4686274	0.8518227
13773	129	183512	183513	1	  -3	Same	+	+	22.033436	0	 35.090134	 35.04931237	1.419243	3.037429	1.0387677	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	1.427752	3.061948	1.0587624	3425	3-hydroxy-3-methylglutaryl CoA synthase	I	3-oxoacyl-[acyl-carrier-protein] synthase	 7.121140e-02	11	7.240270e-05	 7.600290e-04	 2.841862e-02	 3.218737e-02	7.520870e-03		11	48	 TRUE	 TRUE	103	 TRUE	2.3018608	2.0021688	0.5480306	2.3443289	0.7764261	0.9163569	0.5174256	0.6441287	U	0.4686274	0.8973748
13773	129	183513	183514	1	  85	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.427752	3.061948	1.0587624	3425	3-hydroxy-3-methylglutaryl CoA synthase	I	3-oxoacyl-[acyl-carrier-protein] synthase	1.440411	3.165054	1.0470502	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	1.602343e-04	 2.596226e-04	 2.266029e-02	 7.586248e-04	1.845261e-02	0	48	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199142	0.6384101	N	0.5492530	0.6245624
13773	129	183514	183515	1	  28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.440411	3.165054	1.0470502	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.461451	3.276051	1.0497168	-	-	-	hypothetical protein	 0.000000e+00	 0	4.426810e-04	-1.104567e-04	 1.939682e-02	-1.043109e-03	3.981602e-02		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199868	0.6280980	U	0.4686274	0.6162291
13773	129	183515	183516	1	 170	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.461451	3.276051	1.0497168	-	-	-	hypothetical protein	1.399734	2.968368	1.0225589	4901	Ribosomal protein S25	J	conserved hypothetical protein	 0.000000e+00	 0	3.808995e-03	-5.195813e-04	 2.118282e-02	-8.210759e-02	3.807354e-01		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4973005	0.5167658	U	0.4686274	0.6162291
13773	129	183516	183517	1	 156	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.399734	2.968368	1.0225589	4901	Ribosomal protein S25	J	conserved hypothetical protein	1.455861	3.285130	1.1216696	-	-	-	hypothetical protein	 0.000000e+00	 0	3.150277e-03	-2.308206e-04	 1.131246e-02	-5.874100e-02	3.155973e-01		 0	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5041705	0.5371275	U	0.4686274	0.6162291
13773	129	183517	183518	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.455861	3.285130	1.1216696	-	-	-	hypothetical protein	1.524382	3.261773	1.0734373	1313	Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins	R	pyruvate formate-lyase activating enzyme homolog	 0.000000e+00	 0	4.695187e-03	 3.261278e-04	 3.802935e-02	 8.944410e-02	2.550134e-01		 0	 9	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177814	0.5607931	U	0.4686274	0.6162291
13773	129	183518	183519	1	  69	Divergent	-	+	 0.000000	0	  0.000000	 -0.31193905	1.524382	3.261773	1.0734373	1313	Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins	R	pyruvate formate-lyase activating enzyme homolog	1.533788	3.268822	1.0696210	3642	Mn2+-dependent serine/threonine protein kinase	T	conserved hypothetical protein	 4.919271e-02	 5	8.846569e-05	 6.013990e-03	 9.476642e-02	 4.452438e-01	2.264094e-03		 9	 5	FALSE	 TRUE	107	FALSE	0.4469764	0.2541155	0.5480306	0.4469764	0.7448207	0.8403286	0.6534252	0.6496996	U	0.4686274	0.5426787
13773	129	183519	183520	1	 906	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.533788	3.268822	1.0696210	3642	Mn2+-dependent serine/threonine protein kinase	T	conserved hypothetical protein	1.392606	3.041064	1.0665767	-	-	-	hypothetical protein	 0.000000e+00	 0	1.993228e-02	-4.843728e-03	-4.436101e-02	-3.300854e-01	1.366190e+00		 5	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4326072	0.4214178	U	0.4686274	0.6162291
13773	129	183520	183521	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.392606	3.041064	1.0665767	-	-	-	hypothetical protein	1.567364	3.537567	1.1348843	618	Exopolyphosphatase-related proteins	R	predicted phosphoesterase	 0.000000e+00	 0	3.054025e-02	-6.817543e-03	-3.359647e-02	-3.799096e-01	1.621078e+00		 0	 5	 TRUE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4231013	0.4141928	U	0.4686274	0.6162291
13773	129	183521	183522	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.567364	3.537567	1.1348843	618	Exopolyphosphatase-related proteins	R	predicted phosphoesterase	1.529873	3.148709	1.0606181	-	-	-	hypothetical protein	 0.000000e+00	 0	1.405579e-03	 9.101430e-03	 1.086407e-01	 5.387143e-01	1.415059e-02		 5	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6919481	0.6408729	U	0.4686274	0.6162291
13773	129	183522	183523	1	   5	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.529873	3.148709	1.0606181	-	-	-	hypothetical protein	1.447009	3.179800	1.0755337	1382	Prefoldin, chaperonin cofactor	O	conserved hypothetical protein	 0.000000e+00	 0	6.866453e-03	-3.440533e-04	 1.122569e-03	 3.792299e-02	3.854856e-01		 0	 4	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179853	0.5151711	U	0.4686274	0.6162291
13773	129	183523	183524	1	  34	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.447009	3.179800	1.0755337	1382	Prefoldin, chaperonin cofactor	O	conserved hypothetical protein	1.755887	3.932062	1.1468031	-	-	-	hypothetical protein	 0.000000e+00	 0	9.540578e-02	-1.334889e-03	 2.405361e-01	 5.516463e-02	8.623467e-01		 4	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187332	0.4491407	U	0.4686274	0.6162291
13773	129	183524	183525	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.755887	3.932062	1.1468031	-	-	-	hypothetical protein	1.554759	3.503838	1.0851596	2136	Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 dom	JA	conserved hypothetical protein	 0.000000e+00	 0	4.045250e-02	 3.147443e-02	 1.804240e-01	 7.496344e-01	4.987664e-02		 0	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7671508	0.6238995	U	0.4686274	0.6162291
13773	129	183525	183526	1	 -21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.554759	3.503838	1.0851596	2136	Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 dom	JA	conserved hypothetical protein	1.511385	3.202758	1.0643516	1997	Ribosomal protein L37AE/L43A	J	ribosomal protein L37	 0.000000e+00	 0	1.881272e-03	 6.201208e-03	 7.525035e-02	 4.347061e-01	3.622551e-02		 0	 1	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6498431	0.6294602	U	0.4686274	0.6162291
13773	129	183526	183527	1	 602	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511385	3.202758	1.0643516	1997	Ribosomal protein L37AE/L43A	J	ribosomal protein L37	1.378492	3.019106	1.0555087	2123	RNase PH-related exoribonuclease	J	3' exoribonuclease family protein	 1.976326e-03	 1	1.766069e-02	-4.373517e-03	-2.604233e-02	-3.400524e-01	1.360813e+00	J	 1	10	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4947521	0.4298366	0.4217615	Y	1.4497162	0.7118045
13773	129	183527	183528	1	   2	Same	-	-	18.714655	0	 29.574128	 29.57412830	1.378492	3.019106	1.0555087	2123	RNase PH-related exoribonuclease	J	3' exoribonuclease family protein	1.444196	3.225866	1.1169212	689	RNase PH	J	3' exoribonuclease family protein	 2.329131e-01	 9	4.317069e-03	 5.246347e-04	 1.350705e-02	-1.691121e-02	3.893070e-01	J	10	 9	FALSE	 TRUE	102	 TRUE	2.4266354	1.9742945	0.5480306	2.4206051	0.7702221	1.1625725	0.5162565	0.5142888	Y	1.4497162	0.9274388
13773	129	183528	183529	1	  -3	Same	-	-	15.495779	0	 26.355252	 26.35525248	1.444196	3.225866	1.1169212	689	RNase PH	J	3' exoribonuclease family protein	1.484707	3.216043	1.0452348	1097	RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain)	J	conserved hypothetical protein	 1.850254e-01	 9	1.641114e-03	-2.397465e-04	 2.062141e-02	 1.152839e-02	1.425743e-01	J	 9	 9	FALSE	 TRUE	101	 TRUE	2.5590003	1.9509384	0.5480306	2.4912711	0.7702221	1.1198968	0.5187263	0.5949759	Y	1.4497162	0.9242699
13773	129	183529	183530	1	   0	Same	-	-	15.928643	0	 28.985341	 28.85180974	1.484707	3.216043	1.0452348	1097	RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain)	J	conserved hypothetical protein	1.368006	2.920201	1.0094143	1500	Predicted exosome subunit	J	conserved hypothetical protein	 2.789541e-01	 9	1.361918e-02	-2.777969e-03	 3.096726e-03	-2.754350e-01	1.175968e+00	J	 9	12	FALSE	 TRUE	100	 TRUE	2.5250567	1.9551693	0.5480306	2.4662171	0.7702221	1.2100979	0.4459402	0.4294496	Y	1.4497162	0.9249390
13773	129	183530	183531	1	 103	Same	-	-	 0.000000	0	  0.000000	 -0.26871065	1.368006	2.920201	1.0094143	1500	Predicted exosome subunit	J	conserved hypothetical protein	1.477312	3.336431	1.1204701	1992	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.070649e-01	 4	1.194794e-02	-2.161352e-03	-2.048561e-02	-2.296159e-01	1.034053e+00		12	 4	FALSE	 TRUE	 99	 TRUE	0.4469764	0.2589639	0.5480306	0.4469764	0.7323301	1.0334229	0.4572390	0.4366685	U	0.4686274	0.5442113
13773	129	183531	183532	1	  39	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.477312	3.336431	1.1204701	1992	Uncharacterized conserved protein	S	conserved hypothetical protein	1.475476	3.411381	1.1629252	-	-	-	hypothetical protein	 0.000000e+00	 0	3.371271e-06	 6.242291e-04	 2.780320e-02	 1.096130e-01	2.126270e-04		 4	 0	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198829	0.6544230	U	0.4686274	0.6162291
13773	129	183532	183533	1	  16	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.475476	3.411381	1.1629252	-	-	-	hypothetical protein	1.637399	3.271365	1.0710190	-	-	-	hypothetical protein	 0.000000e+00	 0	2.621907e-02	 4.479665e-03	 1.595052e-01	 2.975211e-01	3.537648e-01		 0	 0	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5911167	0.5241295	U	0.4686274	0.6162291
13773	129	183533	183534	1	  15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.637399	3.271365	1.0710190	-	-	-	hypothetical protein	1.439032	3.234411	1.0621691	1325	Predicted exosome subunit	J	conserved hypothetical protein	 0.000000e+00	 0	3.934940e-02	-2.299111e-03	-9.361911e-02	-2.256084e-02	8.896413e-01		 0	 7	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5145376	0.4477579	U	0.4686274	0.6162291
13773	129	183534	183535	1	  49	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.439032	3.234411	1.0621691	1325	Predicted exosome subunit	J	conserved hypothetical protein	1.527485	3.332945	1.0386432	-	-	-	hypothetical protein	 0.000000e+00	 0	7.823808e-03	-9.405252e-04	 2.405653e-02	-1.628452e-02	4.728541e-01		 7	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5166081	0.4980443	U	0.4686274	0.6162291
13773	129	183535	183536	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.527485	3.332945	1.0386432	-	-	-	hypothetical protein	1.434792	3.135912	1.0711758	638	20S proteasome, alpha and beta subunits	O	proteasome alpha subunit	 0.000000e+00	 0	8.591957e-03	-1.263194e-03	-8.035769e-03	-4.172908e-02	5.271005e-01		 0	11	 TRUE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5086220	0.4881566	U	0.4686274	0.6162291
13773	129	183536	183537	1	 368	Divergent	-	+	 0.000000	0	  0.000000	 -0.86882372	1.434792	3.135912	1.0711758	638	20S proteasome, alpha and beta subunits	O	proteasome alpha subunit	1.474510	3.206163	1.1167005	1389	DNA topoisomerase VI, subunit B	L	DNA topoisomerase VI (type II ) subunit b	 2.996634e-01	 9	1.577508e-03	-3.837622e-04	 1.690787e-02	-1.956050e-02	1.396912e-01	0	11	 9	FALSE	 TRUE	 97	FALSE	0.4469764	0.2164619	0.5480306	0.4469764	0.7702221	1.2189334	0.5156308	0.5958874	N	0.5492530	0.5395526
13773	129	183537	183538	1	  36	Same	+	+	13.557465	0	 24.023896	 23.84548843	1.474510	3.206163	1.1167005	1389	DNA topoisomerase VI, subunit B	L	DNA topoisomerase VI (type II ) subunit b	1.412962	3.074278	1.0542795	1697	DNA topoisomerase VI, subunit A	L	DNA topoisomerase VI (type II ) subunit a	 2.996634e-01	 9	3.788157e-03	-8.884089e-04	 1.274378e-02	-8.897644e-02	3.565089e-01	L	 9	11	 TRUE	 TRUE	 98	 TRUE	2.5965907	1.9382871	0.5480306	2.5274876	0.7702221	1.2189334	0.4956506	0.5232211	Y	1.4497162	0.9228025
13773	129	183538	183539	1	  72	Same	+	+	 0.000000	0	  0.000000	 -0.69505644	1.412962	3.074278	1.0542795	1697	DNA topoisomerase VI, subunit A	L	DNA topoisomerase VI (type II ) subunit a	1.508590	3.348814	1.1351602	704	Phosphate uptake regulator	P	conserved hypothetical protein	 1.412268e-01	 7	9.144723e-03	-2.198141e-03	-4.063058e-04	-1.599379e-01	7.139796e-01	0	11	 7	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.2254948	0.5480306	0.4469764	0.7596462	1.0817075	0.4742076	0.4632631	N	0.5492530	0.5424105
13773	129	183539	183540	1	 228	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.508590	3.348814	1.1351602	704	Phosphate uptake regulator	P	conserved hypothetical protein	1.448785	3.174827	1.1267683	-	-	-	hypothetical protein	 0.000000e+00	 0	3.576650e-03	-1.491757e-04	 1.070276e-02	 3.901970e-02	2.389957e-01		 7	 0	 TRUE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181319	0.5668045	U	0.4686274	0.6162291
13773	129	183540	183541	1	 104	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.448785	3.174827	1.1267683	-	-	-	hypothetical protein	1.629950	3.323632	1.1159333	-	-	-	hypothetical protein	 0.000000e+00	 0	3.282100e-02	-4.656967e-04	 9.624202e-02	 6.362141e-02	7.075095e-01		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183462	0.4639635	U	0.4686274	0.6162291
13773	129	183541	183542	1	 241	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.629950	3.323632	1.1159333	-	-	-	hypothetical protein	1.530463	3.339661	1.0301056	2890	Methylase of polypeptide chain release factors	J	conserved hypothetical protein	 0.000000e+00	 0	9.897660e-03	 1.411865e-02	 1.207276e-01	 6.208331e-01	5.265669e-02		 0	 2	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7268108	0.6230318	U	0.4686274	0.6162291
13773	129	183542	183543	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.530463	3.339661	1.0301056	2890	Methylase of polypeptide chain release factors	J	conserved hypothetical protein	1.452246	3.794556	1.2327908	4742	Predicted transcriptional regulator	K	conserved protein (possible helix-turn-helix)	 0.000000e+00	 0	6.117908e-03	 6.748828e-05	 5.651225e-03	 7.217773e-02	3.313094e-01	0	 2	 0	FALSE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179893	0.5307106	N	0.5492530	0.6245624
13773	129	183543	183544	1	  50	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.452246	3.794556	1.2327908	4742	Predicted transcriptional regulator	K	conserved protein (possible helix-turn-helix)	1.581806	3.511249	1.0887380	1581	Archaeal DNA-binding protein	K	conserved hypothetical protein	 0.000000e+00	 0	1.678563e-02	 1.113099e-04	 6.522806e-02	 8.786501e-02	5.237627e-01	K	 0	 9	FALSE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177183	0.4888416	Y	1.4497162	0.7118045
13773	129	183544	183545	1	 146	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.581806	3.511249	1.0887380	1581	Archaeal DNA-binding protein	K	conserved hypothetical protein	1.548791	3.267592	1.0389904	-	-	-	paREP2a	 0.000000e+00	 0	1.089969e-03	 1.270198e-02	 1.501529e-01	 6.125082e-01	8.340750e-03		 9	 0	 TRUE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7238804	0.6438916	U	0.4686274	0.6162291
13773	129	183545	183546	1	  73	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.548791	3.267592	1.0389904	-	-	-	paREP2a	1.499232	3.125958	1.0376264	-	-	-	paREP2b	 0.000000e+00	 0	2.456064e-03	 4.659483e-03	 5.693881e-02	 3.716979e-01	5.515108e-02		 0	 0	FALSE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6206856	0.6221915	U	0.4686274	0.6162291
13773	129	183546	183547	1	 -24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.499232	3.125958	1.0376264	-	-	-	paREP2b	1.377255	3.051847	1.0936951	-	-	-	paREP2b	 0.000000e+00	 0	1.487840e-02	-3.546704e-03	-1.258524e-02	-3.060132e-01	1.234947e+00		 0	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4387303	0.4269687	U	0.4686274	0.6162291
13773	129	183547	183548	1	  37	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.377255	3.051847	1.0936951	-	-	-	paREP2b	1.515402	3.357184	1.1447169	43	3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases	H	conserved hypothetical protein	 0.000000e+00	 0	1.908439e-02	-4.745449e-03	-3.830086e-02	-3.619912e-01	1.448116e+00		 0	10	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4255825	0.4185803	U	0.4686274	0.6162291
13773	129	183548	183549	1	  29	Same	+	+	 4.591747	0	  6.788972	  6.36951087	1.515402	3.357184	1.1447169	43	3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases	H	conserved hypothetical protein	1.531467	3.374079	1.1343954	1679	Uncharacterized conserved protein	S	conserved hypothetical protein	 2.329131e-01	 9	2.580930e-04	 5.125432e-03	 8.654395e-02	 4.095255e-01	8.481519e-03		10	 9	 TRUE	 TRUE	 99	 TRUE	2.8493358	1.8051951	0.5480306	2.8284621	0.7702221	1.1625725	0.6378622	0.6437931	U	0.4686274	0.8640739
13773	129	183549	183550	1	  -7	Same	+	+	 4.969813	0	  4.969813	  4.92899131	1.531467	3.374079	1.1343954	1679	Uncharacterized conserved protein	S	conserved hypothetical protein	1.483113	3.391754	1.1223304	1786	Uncharacterized conserved protein	S	conserved hypothetical protein	 9.224434e-02	 3	2.338096e-03	 2.539956e-03	 3.670781e-02	 2.686191e-01	8.821310e-02		 9	 3	 TRUE	 TRUE	100	 TRUE	2.8267047	1.7617730	0.5480306	2.8904122	0.7136133	0.9819426	0.5780890	0.6118328	U	0.4686274	0.8577867
13773	129	183550	183551	1	 231	Convergent	+	-	 0.000000	0	  0.000000	 -0.19068981	1.483113	3.391754	1.1223304	1786	Uncharacterized conserved protein	S	conserved hypothetical protein	1.531943	3.379310	1.1098096	4047	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 7.283192e-02	 3	2.384357e-03	 2.555056e-03	 6.453405e-02	 2.689189e-01	8.866957e-02		 3	 3	 TRUE	 TRUE	101	FALSE	0.4469764	0.2733593	0.5480306	0.4469764	0.7136133	0.9306064	0.5783208	0.6116373	U	0.4686274	0.5487570
13773	129	183551	183552	1	 -34	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.531943	3.379310	1.1098096	4047	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.522117	3.331698	1.0908898	2219	Eukaryotic-type DNA primase, large subunit	L	conserved protein (possible primase)	 0.000000e+00	 0	9.654513e-05	 5.696839e-03	 8.357205e-02	 4.353423e-01	3.138751e-03		 3	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6501666	0.6484515	U	0.4686274	0.6162291
13773	129	183552	183553	1	 131	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.522117	3.331698	1.0908898	2219	Eukaryotic-type DNA primase, large subunit	L	conserved protein (possible primase)	1.524334	3.465516	1.1165919	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	hypothetical protein	 0.000000e+00	 0	4.913905e-06	 5.158698e-03	 8.186338e-02	 4.067077e-01	1.154429e-04		 0	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6369416	0.6549470	U	0.4686274	0.6162291
13773	129	183553	183554	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.524334	3.465516	1.1165919	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	hypothetical protein	1.570402	3.508786	1.1009637	714	MoxR-like ATPases	R	conserved hypothetical protein	 0.000000e+00	 0	2.122254e-03	 8.680629e-03	 1.446902e-01	 5.177626e-01	2.622262e-02		 0	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6825953	0.6348800	U	0.4686274	0.6162291
13773	129	183554	183555	1	  86	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.570402	3.508786	1.1009637	714	MoxR-like ATPases	R	conserved hypothetical protein	1.541078	3.355534	1.1088260	1341	Predicted GTPase or GTP-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	8.599108e-04	 1.067328e-02	 1.299914e-01	 5.789303e-01	7.388346e-03		 0	 1	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7119669	0.6442479	U	0.4686274	0.6162291
13773	129	183555	183556	1	  91	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.541078	3.355534	1.1088260	1341	Predicted GTPase or GTP-binding protein	R	conserved hypothetical protein	1.501669	3.290419	1.1069571	1407	Predicted ICC-like phosphoesterases	R	conserved hypothetical protein	 1.557260e-03	 1	1.553009e-03	 4.509028e-03	 5.945154e-02	 3.708686e-01	4.136213e-02		 1	 8	 TRUE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4867810	0.6204005	0.6275054	U	0.4686274	0.6162291
13773	129	183556	183557	1	 -48	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.501669	3.290419	1.1069571	1407	Predicted ICC-like phosphoesterases	R	conserved hypothetical protein	1.514350	3.281024	1.0839918	-	-	-	hypothetical protein	 0.000000e+00	 0	1.608122e-04	 3.165286e-03	 6.139369e-02	 3.027902e-01	5.094213e-03		 8	 0	FALSE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5928664	0.6463003	U	0.4686274	0.6162291
13773	129	183557	183558	1	 322	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.514350	3.281024	1.0839918	-	-	-	hypothetical protein	1.497112	3.218905	1.0747143	456	Acetyltransferases	R	N-acetyltransferase	 0.000000e+00	 0	2.971616e-04	 2.878376e-03	 4.963492e-02	 2.852176e-01	1.026264e-02		 0	18	FALSE	 TRUE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5864381	0.6426621	U	0.4686274	0.6162291
13773	129	183558	183559	1	  86	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.497112	3.218905	1.0747143	456	Acetyltransferases	R	N-acetyltransferase	1.470772	3.192989	1.1082247	-	-	-	hypothetical protein	 0.000000e+00	 0	6.938162e-04	 8.859871e-04	 2.674238e-02	 1.342200e-01	4.389716e-02		18	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5260628	0.6263686	U	0.4686274	0.6162291
13773	129	183559	183560	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.470772	3.192989	1.1082247	-	-	-	hypothetical protein	1.509160	3.330507	1.0776493	-	-	-	hypothetical protein	 0.000000e+00	 0	1.473687e-03	 1.119468e-03	 4.134769e-02	 1.549998e-01	8.106978e-02		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5322701	0.6140495	U	0.4686274	0.6162291
13773	129	183560	183561	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.509160	3.330507	1.0776493	-	-	-	hypothetical protein	1.545973	3.497432	1.1421371	-	-	-	hypothetical protein	 0.000000e+00	 0	1.355145e-03	 5.463636e-03	 9.886226e-02	 4.098883e-01	2.876708e-02		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6381698	0.6337043	U	0.4686274	0.6162291
13773	129	183561	183562	1	 209	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.545973	3.497432	1.1421371	-	-	-	hypothetical protein	1.458699	3.203241	1.1033667	436	Aspartate/tyrosine/aromatic aminotransferase	E	aspartate aminotransferase (aspC), conjectural	 0.000000e+00	 0	7.616633e-03	 6.910426e-04	 6.236367e-03	 1.194339e-01	3.216622e-01		 0	63	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5219442	0.5343942	U	0.4686274	0.6162291
13773	129	183562	183563	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.458699	3.203241	1.1033667	436	Aspartate/tyrosine/aromatic aminotransferase	E	aspartate aminotransferase (aspC), conjectural	1.484566	3.179728	1.0578117	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	mutT/nudix family protein	 0.000000e+00	 0	6.690807e-04	 2.423773e-04	 2.623067e-02	 6.611521e-02	5.807249e-02		63	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182425	0.6210721	U	0.4686274	0.6162291
13773	129	183563	183564	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.484566	3.179728	1.0578117	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	mutT/nudix family protein	1.493816	3.161875	1.0542496	-	-	-	hypothetical protein	 0.000000e+00	 0	8.556781e-05	 1.407311e-03	 3.896822e-02	 1.877920e-01	3.583442e-03		 0	 0	 TRUE	 TRUE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5453926	0.6476453	U	0.4686274	0.6162291
13773	129	183564	183565	1	  74	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.493816	3.161875	1.0542496	-	-	-	hypothetical protein	1.424337	3.040662	1.0438322	2108	Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme	R	conserved hypothetical protein	 0.000000e+00	 0	4.827415e-03	-1.147817e-03	 4.605664e-03	-8.338394e-02	4.146055e-01		 0	 6	FALSE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4971111	0.5098051	U	0.4686274	0.6162291
13773	129	183565	183566	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.424337	3.040662	1.0438322	2108	Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme	R	conserved hypothetical protein	1.542874	3.834192	1.1274085	-	-	-	hypothetical protein	 0.000000e+00	 0	1.405117e-02	-2.475144e-03	 1.119133e-02	-1.298309e-01	8.145651e-01		 6	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4816187	0.4536353	U	0.4686274	0.6162291
13773	129	183566	183567	1	 333	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.542874	3.834192	1.1274085	-	-	-	hypothetical protein	1.831579	3.960037	1.1558647	-	-	-	hypothetical protein	 0.000000e+00	 0	8.335066e-02	 3.477997e-02	 7.732073e-01	 7.190632e-01	7.381042e-02		 0	 0	 TRUE	 TRUE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7603548	0.6167268	U	0.4686274	0.6162291
13773	129	183567	183568	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.831579	3.960037	1.1558647	-	-	-	hypothetical protein	1.457857	3.083695	1.0890576	1996	DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)	K	DNA-directed RNA polymerase subunit	 0.000000e+00	 0	1.396687e-01	 2.457436e-03	-3.174883e-01	 1.534307e-01	7.062190e-01		 0	 3	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5315999	0.4641545	U	0.4686274	0.6162291
13773	129	183568	183569	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.457857	3.083695	1.0890576	1996	DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)	K	DNA-directed RNA polymerase subunit	1.443126	3.036764	1.0349715	1056	Nicotinamide mononucleotide adenylyltransferase	H	conserved protein (possible cytidylyltransferase)	 0.000000e+00	 0	2.169798e-04	-5.343251e-05	 2.018038e-02	 2.604533e-03	1.887197e-02	0	 3	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197564	0.6382319	N	0.5492530	0.6245624
13773	129	183569	183570	1	 251	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.443126	3.036764	1.0349715	1056	Nicotinamide mononucleotide adenylyltransferase	H	conserved protein (possible cytidylyltransferase)	1.358050	2.946942	1.0246342	10	Arginase/agmatinase/formimionoglutamate hydrolase, arginase family	E	agmatinase (speB)	 0.000000e+00	 0	7.238025e-03	 7.716174e-04	 5.171267e-02	-1.234886e-02	5.599128e-01	0	 0	34	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177473	0.4824847	N	0.5492530	0.6245624
13773	129	183570	183571	1	  -7	Same	-	-	 0.000000	0	  0.000000	 -0.05918887	1.358050	2.946942	1.0246342	10	Arginase/agmatinase/formimionoglutamate hydrolase, arginase family	E	agmatinase (speB)	1.466530	3.501772	1.1750842	53	Predicted Co/Zn/Cd cation transporters	P	cation efflux system protein, conjectural	 1.061851e-02	 1	1.176795e-02	-1.412947e-03	-1.732755e-02	-1.717614e-01	9.336038e-01	0	34	 1	FALSE	 TRUE	 99	 TRUE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.6041916	0.4726362	0.4442659	N	0.5492530	0.5676209
13773	129	183571	183572	1	  79	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.466530	3.501772	1.1750842	53	Predicted Co/Zn/Cd cation transporters	P	cation efflux system protein, conjectural	1.520904	3.173844	1.0511137	-	-	-	paREP2b	 0.000000e+00	 0	2.956534e-03	 1.052200e-03	 4.472883e-02	 1.477905e-01	1.556100e-01		 1	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5301354	0.5912363	U	0.4686274	0.6162291
13773	129	183572	183573	1	  32	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.520904	3.173844	1.0511137	-	-	-	paREP2b	1.573679	3.179268	1.0382725	-	-	-	paREP2a	 0.000000e+00	 0	2.785232e-03	 8.500273e-03	 1.458306e-01	 5.119539e-01	3.392608e-02		 0	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6782186	0.6305306	U	0.4686274	0.6162291
13773	129	183573	183574	1	  13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.573679	3.179268	1.0382725	-	-	-	paREP2a	1.454347	3.090628	1.0749583	423	Glycyl-tRNA synthetase (class II)	J	glycyl-tRNA synthetase	 0.000000e+00	 0	1.424010e-02	 3.613040e-04	-1.299143e-02	 1.011421e-01	4.749674e-01		 0	14	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5189250	0.4975908	U	0.4686274	0.6162291
13773	129	183574	183575	1	  57	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.454347	3.090628	1.0749583	423	Glycyl-tRNA synthetase (class II)	J	glycyl-tRNA synthetase	1.444292	3.034543	0.9962578	-	-	-	conserved protein	 0.000000e+00	 0	1.011206e-04	-2.098131e-05	 2.059827e-02	 3.625850e-03	9.056378e-03		14	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196581	0.6434772	U	0.4686274	0.6162291
13773	129	183575	183576	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.444292	3.034543	0.9962578	-	-	-	conserved protein	1.489159	3.218574	1.0835706	1676	tRNA splicing endonuclease	J	tRNA intron endonuclease	 0.000000e+00	 0	2.013086e-03	-2.681888e-04	 2.109594e-02	 1.271286e-02	1.654485e-01		 0	 5	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185526	0.5885871	U	0.4686274	0.6162291
13773	129	183576	183577	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.489159	3.218574	1.0835706	1676	tRNA splicing endonuclease	J	tRNA intron endonuclease	1.519750	3.143469	1.0637652	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein, hsp20 homolog, conjectural	 1.917743e-03	 2	9.358338e-04	 2.581599e-03	 5.916691e-02	 2.693118e-01	3.308323e-02	0	 5	 2	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4923490	0.5786696	0.6310514	N	0.5492530	0.6245624
13773	129	183577	183578	1	 100	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.519750	3.143469	1.0637652	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein, hsp20 homolog, conjectural	1.446602	2.897523	0.9791087	-	-	-	hypothetical protein	 0.000000e+00	 0	5.350673e-03	-3.274850e-04	 5.100434e-03	 3.034499e-02	3.234056e-01		 2	 0	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173882	0.5336048	U	0.4686274	0.6162291
13773	129	183578	183579	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.446602	2.897523	0.9791087	-	-	-	hypothetical protein	1.552699	3.394277	1.0672359	778	Nitroreductase	C	reductase, putative	 0.000000e+00	 0	1.125664e-02	-4.853361e-04	 4.106774e-02	 3.690403e-02	4.931208e-01		 0	 8	FALSE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178540	0.4934901	U	0.4686274	0.6162291
13773	129	183579	183580	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.552699	3.394277	1.0672359	778	Nitroreductase	C	reductase, putative	1.428682	3.064406	0.9928041	-	-	-	hypothetical protein	 0.000000e+00	 0	1.538038e-02	-2.300784e-03	-3.091688e-02	-1.003328e-01	7.830145e-01		 8	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4910342	0.4572662	U	0.4686274	0.6162291
13773	129	183580	183581	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.428682	3.064406	0.9928041	-	-	-	hypothetical protein	1.440157	3.141433	1.0591549	5277	Actin and related proteins	Z	hypothetical protein	 0.000000e+00	 0	1.316807e-04	 2.551793e-04	 2.273205e-02	 1.332305e-03	1.526732e-02		 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198606	0.6402042	U	0.4686274	0.6162291
13773	129	183581	183582	1	  14	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.440157	3.141433	1.0591549	5277	Actin and related proteins	Z	hypothetical protein	1.472478	3.204149	1.0572845	-	-	-	actin-like protein	 0.000000e+00	 0	1.044623e-03	-2.369058e-04	 1.877610e-02	-2.871348e-03	8.866957e-02		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198828	0.6116373	U	0.4686274	0.6162291
13773	129	183582	183583	1	 185	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.472478	3.204149	1.0572845	-	-	-	actin-like protein	1.461616	3.187874	1.1168131	419	ATPase involved in DNA repair	L	conserved hypothetical protein	 0.000000e+00	 0	1.179837e-04	 2.155435e-04	 2.239429e-02	 5.698521e-02	8.062744e-03		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186761	0.6440495	U	0.4686274	0.6162291
13773	129	183583	183584	1	  71	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.461616	3.187874	1.1168131	419	ATPase involved in DNA repair	L	conserved hypothetical protein	1.558823	3.472804	1.1418756	1378	Predicted transcriptional regulators	K	conserved hypothetical protein	 0.000000e+00	 0	9.449373e-03	 1.098233e-03	 6.262247e-02	 1.525684e-01	3.277848e-01	0	 0	 2	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5313326	0.5314834	N	0.5492530	0.6245624
13773	129	183584	183585	1	  81	Divergent	-	+	 0.000000	0	  0.000000	 -0.13150953	1.558823	3.472804	1.1418756	1378	Predicted transcriptional regulators	K	conserved hypothetical protein	1.372980	2.893449	1.0343302	1964	Predicted Fe-S oxidoreductases	R	molybdenum cofactor biosynthesis protein (moaA)	 5.662889e-02	 2	3.453784e-02	-8.423955e-03	-9.145246e-02	-4.920035e-01	1.985439e+00		 2	10	FALSE	 TRUE	103	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.6838149	0.8734599	0.4059617	0.4081529	U	0.4686274	0.5537552
13773	129	183585	183586	1	  17	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.372980	2.893449	1.0343302	1964	Predicted Fe-S oxidoreductases	R	molybdenum cofactor biosynthesis protein (moaA)	1.440407	3.406955	1.1725425	-	-	-	hypothetical protein	 0.000000e+00	 0	4.546452e-03	 8.614138e-04	 1.550164e-02	 3.920347e-03	3.999131e-01		10	 0	 TRUE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196429	0.5126202	U	0.4686274	0.6162291
13773	129	183586	183587	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.440407	3.406955	1.1725425	-	-	-	hypothetical protein	1.543396	3.521652	1.1519021	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	 0.000000e+00	 0	1.060672e-02	-1.010712e-03	 3.010964e-02	-4.452798e-03	5.349300e-01		 0	23	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197613	0.4860301	U	0.4686274	0.6162291
13773	129	183587	183588	1	  -9	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.543396	3.521652	1.1519021	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	1.455687	3.403186	1.1554707	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	 0.000000e+00	 0	7.692869e-03	 3.950918e-04	 3.908088e-03	 9.851815e-02	3.474030e-01	V	23	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184799	0.5254647	Y	1.4497162	0.7118045
13773	129	183588	183589	1	  58	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.455687	3.403186	1.1554707	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	1.450820	3.367132	1.1652594	2409	Predicted drug exporters of the RND superfamily	R	membrane protein, putative	 0.000000e+00	 0	2.369147e-05	-2.460935e-06	 2.066292e-02	 1.240599e-02	1.981377e-03		 0	 0	FALSE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185960	0.6503033	U	0.4686274	0.6162291
13773	129	183589	183590	1	  17	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.450820	3.367132	1.1652594	2409	Predicted drug exporters of the RND superfamily	R	membrane protein, putative	1.442063	3.324462	1.1736143	-	-	-	hypothetical protein	 0.000000e+00	 0	7.667249e-05	 5.346345e-06	 2.102040e-02	 7.009033e-04	6.997843e-03		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199219	0.6444474	U	0.4686274	0.6162291
13773	129	183590	183591	1	  27	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.442063	3.324462	1.1736143	-	-	-	hypothetical protein	1.367476	3.066169	1.0379086	1011	Predicted hydrolase (HAD superfamily)	R	hypothetical protein	 0.000000e+00	 0	5.563272e-03	 7.828882e-04	 4.755366e-02	-5.218490e-03	4.728541e-01		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196311	0.4980443	U	0.4686274	0.6162291
13773	129	183591	183592	1	 113	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.367476	3.066169	1.0379086	1011	Predicted hydrolase (HAD superfamily)	R	hypothetical protein	1.360815	2.688609	1.0134886	-	-	-	hypothetical protein	 0.000000e+00	 0	4.436820e-05	 7.600976e-03	 1.125621e-01	 4.884507e-01	1.472486e-03		 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6693363	0.6510547	U	0.4686274	0.6162291
13773	129	183592	183593	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.360815	2.688609	1.0134886	-	-	-	hypothetical protein	1.362462	2.989842	1.0318120	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein	 0.000000e+00	 0	2.711127e-06	 8.055168e-03	 1.141704e-01	 5.099514e-01	7.126832e-05		 0	17	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6771361	0.6552829	U	0.4686274	0.6162291
13773	129	183593	183594	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.362462	2.989842	1.0318120	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein	1.439665	3.134106	1.0695088	-	-	-	hypothetical protein	 0.000000e+00	 0	5.960375e-03	 1.042950e-03	 1.319712e-02	 9.261937e-03	4.856047e-01		17	 0	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5189208	0.4950121	U	0.4686274	0.6162291
13773	129	183594	183595	1	  98	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.439665	3.134106	1.0695088	-	-	-	hypothetical protein	1.424424	3.013785	1.0760761	525	Valyl-tRNA synthetase	J	valyl-tRNA synthetase	 0.000000e+00	 0	2.322808e-04	 3.162750e-04	 2.593336e-02	 2.312981e-03	2.697359e-02		 0	69	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197941	0.6345527	U	0.4686274	0.6162291
13773	129	183595	183596	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -1.88443240	1.424424	3.013785	1.0760761	525	Valyl-tRNA synthetase	J	valyl-tRNA synthetase	1.396073	3.036413	1.0866118	1205	Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	R	ATP-dependent helicase	 1.591753e-02	15	8.037975e-04	 1.491883e-03	 4.410582e-02	 8.122645e-02	7.889933e-02		69	15	 TRUE	 TRUE	106	FALSE	0.4469764	0.1974839	0.5480306	0.4469764	0.7783720	0.6430980	0.5177366	0.6150837	U	0.4686274	0.5247237
13773	129	183596	183597	1	  84	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.396073	3.036413	1.0866118	1205	Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	R	ATP-dependent helicase	1.341847	2.911209	0.9959901	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.940426e-03	 6.060019e-03	 1.142962e-01	 3.772986e-01	1.334520e-01		15	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6241345	0.5974546	U	0.4686274	0.6162291
13773	129	183597	183598	1	  88	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.341847	2.911209	0.9959901	-	-	-	conserved within P. aerophilum	1.506234	3.441775	1.1481316	1132	ABC-type multidrug transport system, ATPase and permease components	V	ABC transporter ATP-binding component, degenerate	 0.000000e+00	 0	2.702310e-02	-6.007650e-03	-7.234220e-02	-4.480816e-01	1.870366e+00		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4121842	0.4100105	U	0.4686274	0.6162291
13773	129	183598	183599	1	1030	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.506234	3.441775	1.1481316	1132	ABC-type multidrug transport system, ATPase and permease components	V	ABC transporter ATP-binding component, degenerate	1.400924	3.412381	1.1917795	477	Permeases of the major facilitator superfamily	GEPR	resistance protein, conjectural	 0.000000e+00	 0	1.109039e-02	-2.767819e-03	-1.279376e-02	-2.225792e-01	9.085616e-01		 0	 3	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4590764	0.4456325	U	0.4686274	0.6162291
13773	129	183599	183600	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.11903382	1.400924	3.412381	1.1917795	477	Permeases of the major facilitator superfamily	GEPR	resistance protein, conjectural	1.386908	2.880587	1.0006783	1839	Uncharacterized conserved protein	S	conserved hypothetical protein	 3.747475e-03	 3	1.964472e-04	 3.254524e-03	 6.288215e-02	 2.175563e-01	1.507826e-02		 3	12	FALSE	 TRUE	106	 TRUE	0.4469764	0.2932604	0.5480306	0.4469764	0.7136133	0.5321665	0.5562425	0.6403514	U	0.4686274	0.5550278
13773	129	183600	183601	1	  85	Divergent	-	+	 0.000000	0	  0.000000	 -0.62878219	1.386908	2.880587	1.0006783	1839	Uncharacterized conserved protein	S	conserved hypothetical protein	1.365410	2.931775	1.0257456	735	Fe2+/Zn2+ uptake regulation proteins	P	ferric uptake regulator, putative	 3.489358e-02	12	4.621285e-04	 5.544597e-03	 9.378105e-02	 3.681722e-01	2.572786e-02		12	17	FALSE	 TRUE	105	FALSE	0.4469764	0.2296104	0.5480306	0.4469764	0.7776747	0.7689006	0.6192641	0.6351292	U	0.4686274	0.5349202
13773	129	183601	183602	1	 107	Same	+	+	 0.000000	0	  0.000000	 -0.26682824	1.365410	2.931775	1.0257456	735	Fe2+/Zn2+ uptake regulation proteins	P	ferric uptake regulator, putative	1.464285	3.092577	1.0915864	665	Glycine/D-amino acid oxidases (deaminating)	E	proline dehydrogenase	-8.914191e-03	 8	9.776092e-03	-1.108460e-03	-1.057521e-02	-1.487564e-01	8.228982e-01	0	17	 8	 TRUE	 TRUE	106	 TRUE	0.4469764	0.2593289	0.5480306	0.4469764	0.7652913	0.5247582	0.4770289	0.4528094	N	0.5492530	0.5530890
13773	129	183602	183603	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.464285	3.092577	1.0915864	665	Glycine/D-amino acid oxidases (deaminating)	E	proline dehydrogenase	1.469237	3.167382	1.1064025	-	-	-	hypothetical protein	 0.000000e+00	 0	2.452817e-05	 2.300434e-04	 2.381399e-02	 5.673194e-02	2.412521e-03		 8	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186841	0.6495169	U	0.4686274	0.6162291
13773	129	183603	183604	1	  53	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.469237	3.167382	1.1064025	-	-	-	hypothetical protein	1.367392	2.897779	1.0294116	45	Succinyl-CoA synthetase, beta subunit	C	succinyl-CoA synthetase beta subunit (sucC)	 0.000000e+00	 0	1.037235e-02	-1.498929e-03	 2.032214e-02	-1.797187e-01	8.925391e-01		 0	44	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4707718	0.4471312	U	0.4686274	0.6162291
13773	129	183604	183605	1	  -3	Same	+	+	65.606532	0	161.442917	160.82331113	1.367392	2.897779	1.0294116	45	Succinyl-CoA synthetase, beta subunit	C	succinyl-CoA synthetase beta subunit (sucC)	1.469391	3.179686	1.1051900	74	Succinyl-CoA synthetase, alpha subunit	C	succinyl-CoA synthetase alpha subunit (sucD)	 6.103390e-01	44	1.040374e-02	-1.511861e-03	-1.403574e-02	-1.807636e-01	8.954417e-01	C	44	45	 TRUE	 TRUE	109	 TRUE	2.0330550	2.0786883	0.5480306	2.0362540	0.7723149	1.2651653	0.4699621	0.4468809	Y	1.4497162	0.9387625
13773	129	183605	183606	1	 302	Same	+	+	 0.000000	0	  0.000000	 -3.59739026	1.469391	3.179686	1.1051900	74	Succinyl-CoA synthetase, alpha subunit	C	succinyl-CoA synthetase alpha subunit (sucD)	1.424130	3.127407	1.0910040	1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR	KE	aminotransferase, class I	 2.652383e-02	28	2.048530e-03	-4.906761e-04	 1.606539e-02	-4.891010e-02	2.022583e-01		45	28	 TRUE	 TRUE	110	 TRUE	0.4469764	0.1864318	0.5480306	0.4469764	0.7759129	0.7196957	0.5069108	0.5792906	U	0.4686274	0.5212107
13773	129	183606	183607	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -1.08208674	1.424130	3.127407	1.0910040	1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR	KE	aminotransferase, class I	1.536165	3.333554	1.1172852	1171	Threonine dehydratase	E	threonine dehydratase (ilvA)	 5.157557e-03	22	1.255182e-02	-2.311104e-03	 1.007799e-02	-1.289191e-01	7.816568e-01		28	22	 TRUE	 TRUE	111	 TRUE	0.4469764	0.2079743	0.5480306	0.4469764	0.7773546	0.5441913	0.4821044	0.4573938	U	0.4686274	0.5280559
13773	129	183607	183608	1	  29	Same	+	+	 0.000000	0	  0.000000	 -0.50412182	1.536165	3.333554	1.1172852	1171	Threonine dehydratase	E	threonine dehydratase (ilvA)	1.482018	2.993575	1.0027465	2872	Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain	R	alanyl-tRNA synthetase related protein	 1.948322e-03	14	2.931950e-03	 2.596153e-03	 3.522457e-02	 2.675071e-01	1.009513e-01		22	14	 TRUE	 TRUE	112	 TRUE	0.4469764	0.2349383	0.5480306	0.4469764	0.7782928	0.4935462	0.5769393	0.6063831	U	0.4686274	0.5366086
13773	129	183608	183609	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.482018	2.993575	1.0027465	2872	Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain	R	alanyl-tRNA synthetase related protein	1.465080	3.586566	1.2112046	475	Kef-type K+ transport systems, membrane components	P	hypothetical protein	 0.000000e+00	 0	2.868846e-04	 4.191728e-04	 2.373276e-02	 8.476925e-02	2.572786e-02		14	 0	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176818	0.6351292	U	0.4686274	0.6162291
13773	129	183609	183610	1	 615	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.465080	3.586566	1.2112046	475	Kef-type K+ transport systems, membrane components	P	hypothetical protein	1.407812	3.125693	1.0494119	-	-	-	hypothetical protein	 0.000000e+00	 0	3.279629e-03	-5.965025e-04	 1.811070e-02	-7.336455e-02	3.053347e-01		 0	 0	 TRUE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5004304	0.5400080	U	0.4686274	0.6162291
13773	129	183610	183611	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.407812	3.125693	1.0494119	-	-	-	hypothetical protein	1.401978	3.009330	1.0210472	3294	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.403748e-05	 2.153539e-03	 4.729529e-02	 1.314977e-01	4.458099e-03		 0	 3	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5249066	0.6467962	U	0.4686274	0.6162291
13773	129	183611	183612	1	 120	Divergent	-	+	 2.079442	0	  2.079442	  2.07944154	1.401978	3.009330	1.0210472	3294	Uncharacterized conserved protein	S	conserved hypothetical protein	1.625129	3.445891	1.0678782	1324	Uncharacterized protein involved in tolerance to divalent cations	P	divalent cation tolerance protein, conjectural	 1.286114e-04	 3	4.979624e-02	-8.585139e-03	-9.190362e-03	-3.594067e-01	1.694193e+00		 3	22	FALSE	 TRUE	114	FALSE	2.9335626	1.6614134	0.5480306	2.9479804	0.7136133	0.4408068	0.4264016	0.4122525	U	0.4686274	0.8396881
13773	129	183612	183613	1	  -7	Same	+	+	 0.000000	0	  0.000000	 -1.10596666	1.625129	3.445891	1.0678782	1324	Uncharacterized protein involved in tolerance to divalent cations	P	divalent cation tolerance protein, conjectural	1.483333	3.222690	1.0785096	3635	Predicted phosphoglycerate mutase, AP superfamily	G	phosphonopyruvate decarboxylase, conjectural	 1.116692e-01	17	2.010590e-02	 5.549212e-03	 1.155857e-02	 3.552437e-01	2.612520e-01	0	22	17	 TRUE	 TRUE	115	 TRUE	0.4469764	0.2069500	0.5480306	0.4469764	0.7782882	1.0486335	0.6147754	0.5572152	N	0.5492530	0.5365404
13773	129	183613	183614	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.483333	3.222690	1.0785096	3635	Predicted phosphoglycerate mutase, AP superfamily	G	phosphonopyruvate decarboxylase, conjectural	1.482257	3.275173	1.0596085	-	-	-	hypothetical protein	 0.000000e+00	 0	1.158335e-06	 9.858205e-04	 3.209252e-02	 1.504810e-01	9.954005e-05		17	 0	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5306664	0.6550803	U	0.4686274	0.6162291
13773	129	183614	183615	1	 -44	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.482257	3.275173	1.0596085	-	-	-	hypothetical protein	1.512158	3.211057	1.0419126	1634	Uncharacterized Rossmann fold enzyme	R	conserved hypothetical protein	 0.000000e+00	 0	8.940924e-04	 1.875486e-03	 4.962430e-02	 2.210190e-01	3.770094e-02		 0	 0	 TRUE	 TRUE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5576688	0.6287554	U	0.4686274	0.6162291
13773	129	183615	183616	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.512158	3.211057	1.0419126	1634	Uncharacterized Rossmann fold enzyme	R	conserved hypothetical protein	1.482887	3.643801	1.2136475	477	Permeases of the major facilitator superfamily	GEPR	sugar transporter, conjectural	 0.000000e+00	 0	8.567950e-04	 1.913788e-03	 3.625615e-02	 2.227907e-01	3.651824e-02		 0	27	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5583920	0.6293389	U	0.4686274	0.6162291
13773	129	183616	183617	1	 254	Same	-	-	 0.000000	0	  0.000000	 -0.15028220	1.482887	3.643801	1.2136475	477	Permeases of the major facilitator superfamily	GEPR	sugar transporter, conjectural	1.477978	3.235548	1.0852840	1650	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 7.917166e-03	 3	2.410317e-05	 8.372858e-04	 2.980335e-02	 1.345039e-01	1.414176e-03		27	 3	FALSE	 TRUE	115	 TRUE	0.4469764	0.2771315	0.5480306	0.4469764	0.7136133	0.5787144	0.5261933	0.6511912	U	0.4686274	0.5499469
13773	129	183617	183618	1	  13	Same	-	-	 0.000000	0	  0.000000	 -0.20585205	1.477978	3.235548	1.0852840	1650	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.511422	3.291047	1.1093933	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	 1.841759e-02	 3	1.118498e-03	 1.595876e-03	 4.675336e-02	 1.997504e-01	5.056458e-02		 3	17	FALSE	 TRUE	114	 TRUE	0.4469764	0.2710905	0.5480306	0.4469764	0.7136133	0.6663050	0.5499731	0.6236602	U	0.4686274	0.5480411
13773	129	183618	183619	1	  -3	Same	-	-	 2.856470	0	  5.519058	  4.35916876	1.511422	3.291047	1.1093933	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	1.496062	3.245016	1.0706130	318	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	IQ	medium-chain acyl-CoA ligase	 1.116560e-03	17	2.359304e-04	 2.681436e-03	 4.800585e-02	 2.749868e-01	8.766593e-03		17	24	FALSE	 TRUE	113	 TRUE	2.8950318	1.7520176	0.5480306	2.8617306	0.7782882	0.4733125	0.5825759	0.6436550	U	0.4686274	0.8552180
13773	129	183619	183620	1	  87	Divergent	-	+	 0.000000	0	  0.000000	 -2.05010507	1.496062	3.245016	1.0706130	318	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	IQ	medium-chain acyl-CoA ligase	1.475558	3.096341	1.0450955	624	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	E	possible succinyl-diaminopimelate desuccinylase	 6.763448e-02	24	4.204270e-04	 1.079412e-03	 2.977425e-02	 1.560835e-01	2.379596e-02		24	43	FALSE	 TRUE	112	FALSE	0.4469764	0.1958623	0.5480306	0.4469764	0.7769228	0.9064426	0.5328084	0.6358881	U	0.4686274	0.5242084
13773	129	183620	183621	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	 -0.04255961	1.475558	3.096341	1.0450955	624	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	E	possible succinyl-diaminopimelate desuccinylase	1.517349	3.382219	1.1362221	778	Nitroreductase	C	conserved hypothetical protein	 3.702577e-04	 2	1.746513e-03	 1.593805e-03	 4.893736e-02	 1.967901e-01	7.803940e-02	0	43	 2	 TRUE	 TRUE	113	FALSE	0.4469764	0.3082875	0.5480306	0.4469764	0.6838149	0.4473591	0.5485227	0.6154327	N	0.5492530	0.5684521
13773	129	183621	183622	1	   6	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.517349	3.382219	1.1362221	778	Nitroreductase	C	conserved hypothetical protein	1.427334	3.503229	1.1485988	-	-	-	hypothetical protein	 0.000000e+00	 0	8.102656e-03	-1.586820e-03	-7.393273e-03	-8.911250e-02	5.656702e-01		 2	 0	FALSE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4955506	0.4818106	U	0.4686274	0.6162291
13773	129	183622	183623	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.427334	3.503229	1.1485988	-	-	-	hypothetical protein	1.473164	3.222187	1.0513741	2226	Methylase involved in ubiquinone/menaquinone biosynthesis	H	ubiquinone/menaquinone biosynthesis methyltransferase (ubiE), conjectural	 0.000000e+00	 0	2.100358e-03	-5.237808e-04	 1.434722e-02	-4.353847e-02	1.960933e-01		 0	13	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5081483	0.5808669	U	0.4686274	0.6162291
13773	129	183623	183624	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.473164	3.222187	1.0513741	2226	Methylase involved in ubiquinone/menaquinone biosynthesis	H	ubiquinone/menaquinone biosynthesis methyltransferase (ubiE), conjectural	1.430711	3.100423	1.0737814	-	-	-	P. aerophilum family 577 protein	 0.000000e+00	 0	1.802271e-03	-4.502715e-04	 1.535563e-02	-3.174680e-02	1.623416e-01		13	 0	 TRUE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5116760	0.5894844	U	0.4686274	0.6162291
13773	129	183624	183625	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.430711	3.100423	1.0737814	-	-	-	P. aerophilum family 577 protein	1.369161	3.048681	1.0740449	-	-	-	P. aerophilum family 562 protein	 0.000000e+00	 0	3.788379e-03	 1.700747e-03	 5.670946e-02	 7.149214e-02	3.113006e-01		 0	 0	FALSE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180253	0.5379312	U	0.4686274	0.6162291
13773	129	183625	183626	1	  42	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.369161	3.048681	1.0740449	-	-	-	P. aerophilum family 562 protein	1.592004	3.489508	1.0977187	-	-	-	hypothetical protein	 0.000000e+00	 0	4.965892e-02	-1.156271e-02	-8.141966e-02	-5.678519e-01	2.306762e+00		 0	 0	FALSE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3970660	0.4050462	U	0.4686274	0.6162291
13773	129	183626	183627	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.592004	3.489508	1.0977187	-	-	-	hypothetical protein	1.468302	3.287342	1.0594303	-	-	-	hypothetical protein	 0.000000e+00	 0	1.530216e-02	 2.377564e-03	-9.466787e-04	 2.148275e-01	3.620289e-01		 0	 0	FALSE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5553645	0.5204865	U	0.4686274	0.6162291
13773	129	183627	183628	1	 200	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.468302	3.287342	1.0594303	-	-	-	hypothetical protein	1.494562	3.356862	1.1028924	-	-	-	hypothetical protein	 0.000000e+00	 0	6.896281e-04	 7.299481e-04	 3.327905e-02	 1.184256e-01	4.784107e-02		 0	 0	FALSE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5217688	0.6247981	U	0.4686274	0.6162291
13773	129	183628	183629	1	 -29	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.494562	3.356862	1.1028924	-	-	-	hypothetical protein	1.562935	3.640498	1.1831172	2860	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.674834e-03	 4.815241e-03	 1.039020e-01	 3.700799e-01	9.997827e-02		 0	 2	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6198316	0.6068453	U	0.4686274	0.6162291
13773	129	183629	183630	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.562935	3.640498	1.1831172	2860	Predicted membrane protein	S	conserved hypothetical protein	1.429972	3.154705	1.0329476	-	-	-	hypothetical protein	 0.000000e+00	 0	1.767935e-02	-2.389386e-03	-3.763017e-02	-9.297277e-02	8.187264e-01		 2	 0	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4945325	0.4531269	U	0.4686274	0.6162291
13773	129	183630	183631	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.429972	3.154705	1.0329476	-	-	-	hypothetical protein	1.472577	3.369668	1.1166873	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.815200e-03	-4.537858e-04	 1.540620e-02	-3.419584e-02	1.660735e-01		 0	 0	FALSE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5107526	0.5884564	U	0.4686274	0.6162291
13773	129	183631	183632	1	  62	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.472577	3.369668	1.1166873	-	-	-	conserved hypothetical protein	1.438154	3.095842	1.0848479	1245	Predicted ATPase, RNase L inhibitor (RLI) homolog	R	RNase L inhibitor homolog	 0.000000e+00	 0	1.184899e-03	-2.804429e-04	 1.676413e-02	-1.021434e-02	1.053882e-01		 0	12	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185854	0.6043969	U	0.4686274	0.6162291
13773	129	183632	183633	1	 124	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.438154	3.095842	1.0848479	1245	Predicted ATPase, RNase L inhibitor (RLI) homolog	R	RNase L inhibitor homolog	1.374307	3.463428	1.1698463	-	-	-	hypothetical protein	 0.000000e+00	 0	4.076533e-03	 1.020509e-03	 4.731520e-02	 2.237943e-02	3.583442e-01		12	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175169	0.5224252	U	0.4686274	0.6162291
13773	129	183633	183634	1	  -9	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.374307	3.463428	1.1698463	-	-	-	hypothetical protein	1.515689	3.423986	1.1618010	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	glycosyl transferase	 0.000000e+00	 0	1.998901e-02	-4.956356e-03	-4.180558e-02	-3.794773e-01	1.519156e+00		 0	 3	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4233094	0.4165262	U	0.4686274	0.6162291
13773	129	183634	183635	1	 132	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.515689	3.423986	1.1618010	1215	Glycosyltransferases, probably involved in cell wall biogenesis	M	glycosyl transferase	1.491588	3.207671	1.0700211	-	-	-	hypothetical protein	 0.000000e+00	 0	5.808735e-04	 2.584381e-03	 4.455956e-02	 2.705958e-01	2.148710e-02		 3	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5797242	0.6369087	U	0.4686274	0.6162291
13773	129	183635	183636	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.491588	3.207671	1.0700211	-	-	-	hypothetical protein	1.466773	3.075976	0.9839308	-	-	-	hypothetical protein	 0.000000e+00	 0	6.157638e-04	 6.182107e-04	 2.446381e-02	 1.078914e-01	4.551984e-02		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196537	0.6257919	U	0.4686274	0.6162291
13773	129	183636	183637	1	 -12	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.466773	3.075976	0.9839308	-	-	-	hypothetical protein	1.519315	3.344217	1.0823030	-	-	-	hypothetical protein	 0.000000e+00	 0	2.760661e-03	 1.044667e-03	 4.406737e-02	 1.470913e-01	1.425743e-01		 0	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5298704	0.5949759	U	0.4686274	0.6162291
13773	129	183637	183638	1	  40	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.519315	3.344217	1.0823030	-	-	-	hypothetical protein	1.458476	3.205468	1.0436440	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar phospate transferase	 0.000000e+00	 0	3.701385e-03	 4.811145e-04	 1.477456e-02	 9.932213e-02	2.071193e-01		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185803	0.5774877	U	0.4686274	0.6162291
13773	129	183638	183639	1	 -23	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.458476	3.205468	1.0436440	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar phospate transferase	1.439600	3.186784	1.1265130	1201	Lhr-like helicases	R	ATP-dependent helicase	 0.000000e+00	 0	3.563003e-04	-8.353068e-05	 1.998677e-02	-2.226399e-03	3.061829e-02		 0	13	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199212	0.6326945	U	0.4686274	0.6162291
13773	129	183639	183640	1	  60	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.439600	3.186784	1.1265130	1201	Lhr-like helicases	R	ATP-dependent helicase	1.517611	3.528935	1.1186482	-	-	-	hypothetical protein	 0.000000e+00	 0	6.085733e-03	-7.808890e-04	 2.238962e-02	-8.386102e-03	3.854856e-01		13	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191396	0.5151711	U	0.4686274	0.6162291
13773	129	183640	183641	1	 -26	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.517611	3.528935	1.1186482	-	-	-	hypothetical protein	1.469492	3.151542	1.0612632	517	FOG: CBS domain	R	conserved protein with 4 CBS domains	 0.000000e+00	 0	2.315482e-03	 1.198491e-03	 2.444720e-02	 1.630631e-01	1.145482e-01		 0	 9	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5356723	0.6020917	U	0.4686274	0.6162291
13773	129	183641	183642	1	  17	Same	-	-	 0.000000	0	  0.000000	 -0.70116330	1.469492	3.151542	1.0612632	517	FOG: CBS domain	R	conserved protein with 4 CBS domains	1.512155	3.145248	1.0474880	127	Xanthosine triphosphate pyrophosphatase	F	nucleoside-triphosphatase (NTPase)	 3.891653e-02	 9	1.820131e-03	 1.099734e-03	 4.214014e-02	 1.548172e-01	9.471089e-02		 9	55	FALSE	 TRUE	106	 TRUE	0.4469764	0.2250311	0.5480306	0.4469764	0.7702221	0.8007956	0.5320016	0.6088875	U	0.4686274	0.5334684
13773	129	183642	183643	1	   0	Same	-	-	 0.000000	0	  0.000000	 -0.77117342	1.512155	3.145248	1.0474880	127	Xanthosine triphosphate pyrophosphatase	F	nucleoside-triphosphatase (NTPase)	1.424281	3.010410	1.0664221	526	Thiol-disulfide isomerase and thioredoxins	OC	glutaredoxin-like protein	 2.973966e-02	 7	7.721849e-03	-1.647382e-03	-6.033190e-03	-1.043910e-01	5.737801e-01		55	 7	FALSE	 TRUE	105	 TRUE	0.4469764	0.2198448	0.5480306	0.4469764	0.7596462	0.7322295	0.4898862	0.4809145	U	0.4686274	0.5318235
13773	129	183643	183644	1	  25	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.424281	3.010410	1.0664221	526	Thiol-disulfide isomerase and thioredoxins	OC	glutaredoxin-like protein	1.376081	2.841700	0.9758487	-	-	-	hypothetical protein	 0.000000e+00	 0	2.323203e-03	 2.041851e-03	 5.714858e-02	 1.125922e-01	1.940595e-01		 7	 0	FALSE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5202559	0.5817361	U	0.4686274	0.6162291
13773	129	183644	183645	1	  28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.376081	2.841700	0.9758487	-	-	-	hypothetical protein	1.432814	3.220111	1.0798073	39	Malate/lactate dehydrogenases	C	malate dehydrogenase	 0.000000e+00	 0	3.218583e-03	 1.399221e-03	 2.357068e-02	 4.866272e-02	2.952417e-01		 0	54	FALSE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187637	0.5436061	U	0.4686274	0.6162291
13773	129	183645	183646	1	  68	Same	-	-	 1.791759	0	 11.184421	  2.15314922	1.432814	3.220111	1.0798073	39	Malate/lactate dehydrogenases	C	malate dehydrogenase	1.516560	3.245041	1.1284345	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	NADH oxidase (nox)	 5.869990e-02	39	7.013403e-03	-1.210743e-03	 1.648937e-02	-4.716078e-02	4.634025e-01		54	39	FALSE	 TRUE	102	 TRUE	2.9327734	1.6698372	0.5480306	2.7240699	0.7736367	0.8789942	0.5072577	0.5009016	U	0.4686274	0.8411407
13773	129	183646	183647	1	 329	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.516560	3.245041	1.1284345	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	NADH oxidase (nox)	1.305292	2.920667	1.1052237	-	-	-	hypothetical protein	 0.000000e+00	 0	4.463402e-02	-9.520939e-03	-4.716157e-02	-5.613058e-01	2.353622e+00		39	 0	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3979894	0.4044878	U	0.4686274	0.6162291
13773	129	183647	183648	1	  73	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.305292	2.920667	1.1052237	-	-	-	hypothetical protein	1.425093	3.322647	1.1375384	382	4-hydroxybenzoate polyprenyltransferase and related prenyltransferases	H	4-hydroxybenzoate octaprenyltransferase (ubiA)	 0.000000e+00	 0	1.435214e-02	 3.842485e-03	 1.321485e-02	 1.601688e-01	5.772734e-01		 0	 7	FALSE	 TRUE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5347102	0.4802448	U	0.4686274	0.6162291
13773	129	183648	183649	1	 -61	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.425093	3.322647	1.1375384	382	4-hydroxybenzoate polyprenyltransferase and related prenyltransferases	H	4-hydroxybenzoate octaprenyltransferase (ubiA)	1.555036	3.779359	1.2331522	477	Permeases of the major facilitator superfamily	GEPR	drug resistance protein, conjectural	 0.000000e+00	 0	1.688535e-02	-2.725848e-03	 1.438900e-02	-1.311431e-01	8.737873e-01		 7	 0	 TRUE	 TRUE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4812531	0.4485115	U	0.4686274	0.6162291
13773	129	183649	183650	1	 -40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.555036	3.779359	1.2331522	477	Permeases of the major facilitator superfamily	GEPR	drug resistance protein, conjectural	1.514465	3.182476	1.0378620	97	Ribosomal protein L6P/L9E	J	ribosomal protein L6	 0.000000e+00	 0	1.646060e-03	 6.536965e-03	 7.999271e-02	 4.490482e-01	3.035029e-02		 0	52	FALSE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6554013	0.6329638	U	0.4686274	0.6162291
13773	129	183650	183651	1	  67	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.514465	3.182476	1.0378620	97	Ribosomal protein L6P/L9E	J	ribosomal protein L6	1.479216	3.428924	1.1334820	2096	Uncharacterized conserved protein	S	conserved within P. aerophilum	 0.000000e+00	 0	1.242427e-03	 1.754885e-03	 3.312000e-02	 2.114231e-01	5.265669e-02		52	 0	FALSE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5538092	0.6230318	U	0.4686274	0.6162291
13773	129	183651	183652	1	  16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.479216	3.428924	1.1334820	2096	Uncharacterized conserved protein	S	conserved within P. aerophilum	1.695917	3.869801	1.1710040	-	-	-	hypothetical protein	 0.000000e+00	 0	4.695931e-02	 6.803565e-03	 2.501640e-01	 3.475939e-01	3.703885e-01		 0	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6117416	0.5182644	U	0.4686274	0.6162291
13773	129	183652	183653	1	 267	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.695917	3.869801	1.1710040	-	-	-	hypothetical protein	1.771508	3.741201	1.0540512	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	5.713971e-03	 7.827610e-02	 1.044354e+00	 9.543977e-01	3.392608e-04		 0	 2	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8124037	0.6537679	U	0.4686274	0.6162291
13773	129	183653	183654	1	  29	Same	+	+	 0.000000	0	  0.000000	 -0.07232066	1.771508	3.741201	1.0540512	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.459084	3.298383	1.0691251	589	Universal stress protein UspA and related nucleotide-binding proteins	T	universal stress protein family	 9.161747e-05	 2	9.760885e-02	 2.462095e-03	-2.105579e-01	 1.665087e-01	6.680522e-01		 2	34	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6838149	0.4402366	0.5373414	0.4691571	U	0.4686274	0.5573725
13773	129	183654	183655	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.459084	3.298383	1.0691251	589	Universal stress protein UspA and related nucleotide-binding proteins	T	universal stress protein family	1.569391	3.823999	1.1999919	477	Permeases of the major facilitator superfamily	GEPR	transport protein part 2, authentic frameshift	 0.000000e+00	 0	1.216766e-02	 9.075581e-04	 6.655806e-02	 1.356690e-01	4.028304e-01		34	 0	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5267157	0.5119762	U	0.4686274	0.6162291
13773	129	183655	183656	1	 -69	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.569391	3.823999	1.1999919	477	Permeases of the major facilitator superfamily	GEPR	transport protein part 2, authentic frameshift	1.459393	3.597965	1.1903404	477	Permeases of the major facilitator superfamily	GEPR	transport protein part 1, authentic frameshift	 0.000000e+00	 0	1.209965e-02	 9.439869e-04	-3.421594e-03	 1.406024e-01	3.950745e-01		 0	 0	FALSE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5277629	0.5132117	U	0.4686274	0.6162291
13773	129	183656	183657	1	  78	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.459393	3.597965	1.1903404	477	Permeases of the major facilitator superfamily	GEPR	transport protein part 1, authentic frameshift	1.472557	3.348191	1.1226351	-	-	-	hypothetical protein	 0.000000e+00	 0	1.732824e-04	 1.693093e-04	 2.369222e-02	 5.049331e-02	1.290133e-02		 0	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187852	0.6415107	U	0.4686274	0.6162291
13773	129	183657	183658	1	 -32	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.472557	3.348191	1.1226351	-	-	-	hypothetical protein	1.470000	3.677709	1.1989149	730	Predicted permeases	R	hypothetical protein	 0.000000e+00	 0	6.535574e-06	 3.937966e-04	 2.508387e-02	 7.817605e-02	3.115780e-04		 0	 0	 TRUE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178115	0.6539188	U	0.4686274	0.6162291
13773	129	183658	183659	1	 106	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.470000	3.677709	1.1989149	730	Predicted permeases	R	hypothetical protein	1.370935	3.273790	1.1055506	4023	Preprotein translocase subunit Sec61beta	U	hypothetical protein	 0.000000e+00	 0	9.813947e-03	-1.497101e-03	 1.879347e-02	-1.775594e-01	8.580759e-01		 0	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4713080	0.4495188	U	0.4686274	0.6162291
13773	129	183659	183660	1	 177	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.370935	3.273790	1.1055506	4023	Preprotein translocase subunit Sec61beta	U	hypothetical protein	1.346098	3.066685	1.0732087	747	ABC-type dipeptide transport system, periplasmic component	E	dipeptide binding protein	 0.000000e+00	 0	6.168577e-04	 8.471827e-03	 1.315086e-01	 5.271453e-01	2.216739e-02	0	 0	50	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6870455	0.6366745	N	0.5492530	0.6245624
13773	129	183660	183661	1	  -3	Convergent	+	-	14.897927	0	 31.003127	 29.06991464	1.346098	3.066685	1.0732087	747	ABC-type dipeptide transport system, periplasmic component	E	dipeptide binding protein	1.421756	3.425595	1.1676432	1173	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide transport permease	 2.388100e-02	19	5.724136e-03	 3.120597e-03	 3.129962e-02	 1.672791e-01	3.555930e-01		50	19	 TRUE	 TRUE	 99	FALSE	2.5753743	1.9636520	0.5480306	2.4003631	0.7779521	0.7002468	0.5376222	0.5235224	U	0.4686274	0.8894766
13773	129	183661	183662	1	   0	Same	-	-	23.483782	0	 33.179630	 31.36760758	1.421756	3.425595	1.1676432	1173	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide transport permease	1.451773	3.475871	1.1937884	601	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide transport permease	 3.274588e-02	19	9.010343e-04	-1.127570e-05	 1.837567e-02	-2.059066e-02	9.423910e-02		19	43	FALSE	 TRUE	 98	 TRUE	2.2720708	1.9807008	0.5480306	2.3586192	0.7779521	0.7555347	0.5152182	0.6091015	U	0.4686274	0.8951754
13773	129	183662	183663	1	 528	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.451773	3.475871	1.1937884	601	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	dipeptide transport permease	1.525744	3.272221	1.0555162	-	-	-	hypothetical protein	 0.000000e+00	 0	5.471736e-03	 2.828805e-05	 3.510690e-02	 6.465922e-02	3.070334e-01		43	 0	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182816	0.5396610	U	0.4686274	0.6162291
13773	129	183663	183664	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.525744	3.272221	1.0555162	-	-	-	hypothetical protein	1.478384	3.214759	1.0623518	-	-	-	hypothetical protein	 0.000000e+00	 0	2.243004e-03	 2.006846e-03	 3.201358e-02	 2.305677e-01	9.004605e-02		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5619239	0.6109629	U	0.4686274	0.6162291
13773	129	183664	183665	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.478384	3.214759	1.0623518	-	-	-	hypothetical protein	1.419556	3.190131	1.0407502	-	-	-	hypothetical protein	 0.000000e+00	 0	3.460706e-03	-8.593075e-04	 1.141427e-02	-7.857185e-02	3.313094e-01		 0	 0	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4984120	0.5307106	U	0.4686274	0.6162291
13773	129	183665	183666	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.419556	3.190131	1.0407502	-	-	-	hypothetical protein	1.429069	3.141549	1.0353367	455	ATPases involved in chromosome partitioning	D	hypothetical protein	 0.000000e+00	 0	9.049389e-05	 7.107066e-04	 2.773907e-02	 2.818338e-02	9.203038e-03		 0	 0	 TRUE	 TRUE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173819	0.6433585	U	0.4686274	0.6162291
13773	129	183666	183667	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.429069	3.141549	1.0353367	455	ATPases involved in chromosome partitioning	D	hypothetical protein	1.343783	3.005146	1.0545143	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein, conjectural	 0.000000e+00	 0	7.273687e-03	 2.402239e-03	 7.696684e-02	 1.032095e-01	4.739102e-01		 0	 0	 TRUE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190548	0.4977420	U	0.4686274	0.6162291
13773	129	183667	183668	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.343783	3.005146	1.0545143	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein, conjectural	1.350746	3.159619	1.0787493	-	-	-	hypothetical protein	 0.000000e+00	 0	4.848377e-05	 1.083053e-02	 1.436888e-01	 6.292651e-01	1.847086e-03		 0	 0	 TRUE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7284947	0.6505622	U	0.4686274	0.6162291
13773	129	183668	183669	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.350746	3.159619	1.0787493	-	-	-	hypothetical protein	1.361390	3.100535	1.1110331	-	-	-	hypothetical protein	 0.000000e+00	 0	1.132842e-04	 9.058494e-03	 1.214990e-01	 5.516439e-01	3.313094e-03		 0	 0	 TRUE	 TRUE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7000423	0.6480385	U	0.4686274	0.6162291
13773	129	183669	183670	1	  47	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.361390	3.100535	1.1110331	-	-	-	hypothetical protein	1.359462	3.218214	1.0872858	-	-	-	hypothetical protein	 0.000000e+00	 0	3.717144e-06	 8.274071e-03	 1.183712e-01	 5.176460e-01	9.954005e-05		 0	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6822277	0.6550803	U	0.4686274	0.6162291
13773	129	183670	183671	1	  54	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.359462	3.218214	1.0872858	-	-	-	hypothetical protein	1.456950	3.364923	1.1801270	-	-	-	hypothetical protein	 0.000000e+00	 0	9.503986e-03	-5.108945e-04	-6.619585e-03	-1.073101e-01	7.614337e-01		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4886155	0.4584148	U	0.4686274	0.6162291
13773	129	183671	183672	1	  59	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.456950	3.364923	1.1801270	-	-	-	hypothetical protein	1.338310	3.035230	1.0370695	-	-	-	hypothetical protein	 0.000000e+00	 0	1.407547e-02	-6.284422e-04	 4.578581e-02	-1.247025e-01	9.801456e-01		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4835508	0.4412509	U	0.4686274	0.6162291
13773	129	183672	183673	1	  50	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.338310	3.035230	1.0370695	-	-	-	hypothetical protein	1.439287	3.500006	1.1677627	-	-	-	hypothetical protein	 0.000000e+00	 0	1.019623e-02	 1.369016e-03	 4.642335e-03	 1.292254e-02	6.831917e-01		 0	 0	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184236	0.4664146	U	0.4686274	0.6162291
13773	129	183673	183674	1	 -15	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.439287	3.500006	1.1677627	-	-	-	hypothetical protein	1.385836	2.974963	0.9991273	-	-	-	hypothetical protein	 0.000000e+00	 0	2.856988e-03	 7.936560e-04	 4.055928e-02	 8.363721e-03	2.804202e-01		 0	 0	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190690	0.5510159	U	0.4686274	0.6162291
13773	129	183674	183675	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.385836	2.974963	0.9991273	-	-	-	hypothetical protein	1.426349	3.185126	1.1086859	-	-	-	hypothetical protein	 0.000000e+00	 0	1.641345e-03	 1.641787e-03	 3.061252e-02	 8.530995e-02	1.508038e-01		 0	 0	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176826	0.5929737	U	0.4686274	0.6162291
13773	129	183675	183676	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.426349	3.185126	1.1086859	-	-	-	hypothetical protein	1.340649	2.933286	1.0136987	-	-	-	hypothetical protein	 0.000000e+00	 0	7.344519e-03	 2.773424e-03	 8.271761e-02	 1.296471e-01	4.509488e-01		 0	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5240737	0.5035785	U	0.4686274	0.6162291
13773	129	183676	183677	1	  32	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.340649	2.933286	1.0136987	-	-	-	hypothetical protein	1.407212	3.111002	1.1032309	-	-	-	hypothetical protein	 0.000000e+00	 0	4.430673e-03	 4.892712e-03	 5.175655e-02	 2.777244e-01	2.427623e-01		 0	 0	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5837754	0.5650312	U	0.4686274	0.6162291
13773	129	183677	183678	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.407212	3.111002	1.1032309	-	-	-	hypothetical protein	1.502961	3.417446	1.1390219	-	-	-	hypothetical protein	 0.000000e+00	 0	9.167742e-03	-2.278292e-03	-4.104471e-03	-1.757977e-01	7.388346e-01		 0	 0	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4715751	0.4609040	U	0.4686274	0.6162291
13773	129	183678	183679	1	 197	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.502961	3.417446	1.1390219	-	-	-	hypothetical protein	1.377863	3.163707	1.0778806	-	-	-	hypothetical protein	 0.000000e+00	 0	1.564947e-02	-3.791784e-03	-1.661982e-02	-3.157923e-01	1.269297e+00		 0	 0	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4360885	0.4255677	U	0.4686274	0.6162291
13773	129	183679	183680	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.377863	3.163707	1.0778806	-	-	-	hypothetical protein	1.410998	3.040329	1.0210129	-	-	-	hypothetical protein	 0.000000e+00	 0	1.097965e-03	 2.970202e-03	 4.587961e-02	 1.835572e-01	8.866957e-02		 0	 0	 TRUE	 TRUE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5434213	0.6116373	U	0.4686274	0.6162291
13773	129	183680	183681	1	  55	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.410998	3.040329	1.0210129	-	-	-	hypothetical protein	1.538403	3.472078	1.1461646	1602	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.623199e-02	-3.514736e-03	-5.275188e-03	-2.155920e-01	1.024709e+00		 0	 3	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4602820	0.4374432	U	0.4686274	0.6162291
13773	129	183681	183682	1	  28	Same	-	-	 0.000000	0	  0.000000	 -0.26504093	1.538403	3.472078	1.1461646	1602	Uncharacterized conserved protein	S	conserved hypothetical protein	1.483817	3.350480	1.1156986	626	Cystathionine beta-lyases/cystathionine gamma-synthases	E	cystathionine gamma-synthase	 1.308803e-02	 3	2.979633e-03	 2.821259e-03	 3.716839e-02	 2.818444e-01	9.565799e-02		 3	54	FALSE	 TRUE	114	 TRUE	0.4469764	0.2605979	0.5480306	0.4469764	0.7136133	0.6246374	0.5849816	0.6084549	U	0.4686274	0.5447277
13773	129	183682	183683	1	 189	Divergent	-	+	 0.000000	0	  0.000000	 -0.17185026	1.483817	3.350480	1.1156986	626	Cystathionine beta-lyases/cystathionine gamma-synthases	E	cystathionine gamma-synthase	1.497988	3.320684	1.0433806	569	K+ transport systems, NAD-binding component	P	potassium transport peripheral protein, conjectural	 3.305270e-03	 2	2.008178e-04	 1.510828e-03	 4.124643e-02	 1.974745e-01	9.499891e-03	0	54	 2	FALSE	 TRUE	113	FALSE	0.4469764	0.2758904	0.5480306	0.4469764	0.6838149	0.5221400	0.5491640	0.6431205	N	0.5492530	0.5582988
13773	129	183683	183684	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.497988	3.320684	1.0433806	569	K+ transport systems, NAD-binding component	P	potassium transport peripheral protein, conjectural	1.469167	3.264247	1.0894773	-	-	-	potassium transport membrane protein, conjectural	 0.000000e+00	 0	8.306564e-04	 8.282009e-04	 2.570993e-02	 1.305082e-01	5.407499e-02		 2	 0	 TRUE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5241888	0.6225521	U	0.4686274	0.6162291
13773	129	183684	183685	1	  21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.469167	3.264247	1.0894773	-	-	-	potassium transport membrane protein, conjectural	1.450203	3.118907	1.0997703	574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	G	phosphoenolpyruvate synthase (pyruvate,water dikinase)	 0.000000e+00	 0	3.596529e-04	-2.115523e-05	 1.969164e-02	 2.282883e-02	3.115780e-02		 0	24	FALSE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174875	0.6322033	U	0.4686274	0.6162291
13773	129	183685	183686	1	 126	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.450203	3.118907	1.0997703	574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	G	phosphoenolpyruvate synthase (pyruvate,water dikinase)	1.512373	3.246166	1.0771876	-	-	-	hypothetical protein	 0.000000e+00	 0	3.865190e-03	-7.257980e-05	 2.932892e-02	 5.018350e-02	2.420066e-01		24	 0	FALSE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187805	0.5652310	U	0.4686274	0.6162291
13773	129	183686	183687	1	  67	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.512373	3.246166	1.0771876	-	-	-	hypothetical protein	1.402932	3.108366	1.0828631	1032	Fe-S oxidoreductase	C	conserved hypothetical protein	 0.000000e+00	 0	1.197743e-02	-2.955174e-03	-1.729452e-02	-2.242714e-01	9.336038e-01		 0	 8	FALSE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4583151	0.4442659	U	0.4686274	0.6162291
13773	129	183687	183688	1	 -39	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.402932	3.108366	1.0828631	1032	Fe-S oxidoreductase	C	conserved hypothetical protein	1.482986	3.194584	1.1320022	-	-	-	hypothetical protein	 0.000000e+00	 0	6.408672e-03	-1.531037e-03	-5.928272e-04	-1.508032e-01	6.032151e-01		 8	 0	 TRUE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4765214	0.4767123	U	0.4686274	0.6162291
13773	129	183688	183689	1	 131	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.482986	3.194584	1.1320022	-	-	-	hypothetical protein	1.477575	3.351037	1.1299820	-	-	-	hypothetical protein	 0.000000e+00	 0	2.927468e-05	 8.271902e-04	 2.961557e-02	 1.340805e-01	1.981377e-03		 0	 0	FALSE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5259324	0.6503033	U	0.4686274	0.6162291
13773	129	183689	183690	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.477575	3.351037	1.1299820	-	-	-	hypothetical protein	1.525357	3.406630	1.1726082	533	Metal-dependent proteases with possible chaperone activity	O	o-syaloglycoprotein endopeptidase	 0.000000e+00	 0	2.283128e-03	 1.936584e-03	 5.553294e-02	 2.242608e-01	9.376850e-02		 0	63	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5589390	0.6094409	U	0.4686274	0.6162291
13773	129	183690	183691	1	   1	Same	-	-	 7.575243	0	  7.575243	  7.57524271	1.525357	3.406630	1.1726082	533	Metal-dependent proteases with possible chaperone activity	O	o-syaloglycoprotein endopeptidase	1.284528	2.673174	1.0148683	1998	Ribosomal protein S27AE	J	ribosomal protein S27	 6.672049e-03	 3	5.799888e-02	-1.234211e-02	-6.675290e-02	-6.308271e-01	2.624748e+00	0	63	 3	FALSE	 TRUE	109	 TRUE	2.7217601	1.8131776	0.5480306	2.8161013	0.7136133	0.5663031	0.3912435	0.4026225	N	0.5492530	0.8711225
13773	129	183691	183692	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.284528	2.673174	1.0148683	1998	Ribosomal protein S27AE	J	ribosomal protein S27	1.452505	3.088854	1.0535606	2004	Ribosomal protein S24E	J	ribosomal protein S24	 0.000000e+00	 0	2.821629e-02	-1.855758e-04	-5.213881e-02	-1.056338e-01	1.162690e+00	J	 3	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4891942	0.4300663	Y	1.4497162	0.7118045
13773	129	183692	183693	1	  46	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.452505	3.088854	1.0535606	2004	Ribosomal protein S24E	J	ribosomal protein S24	1.456920	3.361264	1.0652496	3431	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.949173e-05	 6.146837e-06	 2.088400e-02	 1.605834e-02	1.472486e-03		 0	 0	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181137	0.6510547	U	0.4686274	0.6162291
13773	129	183693	183694	1	 251	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.456920	3.361264	1.0652496	3431	Predicted membrane protein	S	conserved hypothetical protein	1.416426	3.150113	1.1025380	1032	Fe-S oxidoreductase	C	conserved hypothetical protein	 0.000000e+00	 0	1.639732e-03	-1.932626e-04	 2.150538e-02	-3.697942e-02	1.586521e-01		 0	17	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5098258	0.5904345	U	0.4686274	0.6162291
13773	129	183694	183695	1	 -23	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.416426	3.150113	1.1025380	1032	Fe-S oxidoreductase	C	conserved hypothetical protein	1.540431	3.574595	1.1666871	1266	Predicted metal-dependent membrane protease	R	conserved within P. aerophilum	 0.000000e+00	 0	1.537721e-02	-3.113362e-03	 1.363233e-03	-1.795043e-01	9.336038e-01		17	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4709062	0.4442659	U	0.4686274	0.6162291
13773	129	183695	183696	1	 183	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.540431	3.574595	1.1666871	1266	Predicted metal-dependent membrane protease	R	conserved within P. aerophilum	1.438990	3.297355	1.0846338	598	Mg2+ and Co2+ transporters	P	hypothetical protein	 0.000000e+00	 0	1.029038e-02	-1.104354e-03	-1.191685e-02	-1.866405e-02	5.496237e-01		 0	 0	FALSE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5157691	0.4836874	U	0.4686274	0.6162291
13773	129	183696	183697	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.438990	3.297355	1.0846338	598	Mg2+ and Co2+ transporters	P	hypothetical protein	1.437875	3.111696	1.0926482	2423	Predicted ornithine cyclodeaminase, mu-crystallin homolog	E	ornithine cyclodeaminase (arcB)	 0.000000e+00	 0	1.242485e-06	 1.676631e-04	 2.277143e-02	 9.812647e-04	1.325237e-04	0	 0	15	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198978	0.6548417	N	0.5492530	0.6245624
13773	129	183697	183698	1	  -9	Same	+	+	 0.000000	0	  0.000000	 -0.60578367	1.437875	3.111696	1.0926482	2423	Predicted ornithine cyclodeaminase, mu-crystallin homolog	E	ornithine cyclodeaminase (arcB)	1.463702	3.176982	1.1076323	1061	DNA or RNA helicases of superfamily II	KL	helicase, possible DNA repair	 9.572191e-02	10	6.670356e-04	-1.663937e-04	 1.871290e-02	-7.965560e-03	6.221253e-02		15	10	 TRUE	 TRUE	108	 TRUE	0.4469764	0.2314065	0.5480306	0.4469764	0.7739415	0.9981941	0.5192060	0.6197187	U	0.4686274	0.5354895
13773	129	183698	183699	1	  -3	Same	+	+	19.126115	0	 29.985588	 29.98558847	1.463702	3.176982	1.1076323	1061	DNA or RNA helicases of superfamily II	KL	helicase, possible DNA repair	1.395696	3.072886	1.0521069	3372	Uncharacterized conserved protein	S	conserved hypothetical protein	 2.749196e-01	 8	4.624783e-03	-6.855814e-04	 2.021472e-02	-9.770004e-02	4.530127e-01		10	 8	 TRUE	 TRUE	109	 TRUE	2.4002074	1.9764282	0.5480306	2.4139043	0.7652913	1.2035108	0.4925009	0.5032088	U	0.4686274	0.8931569
13773	129	183699	183700	1	 136	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.395696	3.072886	1.0521069	3372	Uncharacterized conserved protein	S	conserved hypothetical protein	1.430758	3.196291	1.1078911	3413	Predicted DNA binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	1.229290e-03	 1.149314e-03	 2.737934e-02	 4.920400e-02	1.257173e-01		 8	 0	 TRUE	 TRUE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187752	0.5994609	U	0.4686274	0.6162291
13773	129	183700	183701	1	 103	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.430758	3.196291	1.1078911	3413	Predicted DNA binding protein	R	conserved hypothetical protein	1.376764	2.863163	0.9601070	1145	Ferredoxin	C	ferredoxin	 0.000000e+00	 0	2.915289e-03	 1.539986e-03	 5.180593e-02	 6.557805e-02	2.581233e-01		 0	 1	FALSE	 TRUE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182555	0.5591829	U	0.4686274	0.6162291
13773	129	183701	183702	1	  32	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.376764	2.863163	0.9601070	1145	Ferredoxin	C	ferredoxin	1.430986	3.105705	1.0904219	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme homolog	 7.562104e-04	 1	2.940039e-03	 1.522918e-03	 2.545794e-02	 6.369091e-02	2.612520e-01	0	 1	 4	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.5183333	0.5572152	N	0.5492530	0.6245624
13773	129	183702	183703	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.430986	3.105705	1.0904219	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme homolog	1.533942	3.477116	1.0589357	-	-	-	paREP13	 0.000000e+00	 0	1.059995e-02	-1.684554e-03	 1.728916e-02	-7.180136e-02	6.346085e-01		 4	 0	 TRUE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5008512	0.4721311	U	0.4686274	0.6162291
13773	129	183703	183704	1	 -30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.533942	3.477116	1.0589357	-	-	-	paREP13	1.526805	3.261876	1.0824237	1435	Thymidine kinase	F	thymidine kinase	 0.000000e+00	 0	5.094675e-05	 6.225204e-03	 9.066127e-02	 4.579331e-01	1.038986e-03		 0	34	FALSE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6597374	0.6518064	U	0.4686274	0.6162291
13773	129	183704	183705	1	  17	Same	-	-	 0.000000	0	  0.000000	 -0.25131443	1.526805	3.261876	1.0824237	1435	Thymidine kinase	F	thymidine kinase	1.438855	3.569228	1.2269751	1906	Uncharacterized conserved protein	S	conserved hypothetical protein	 9.161747e-05	 2	7.735210e-03	-9.455326e-04	-4.360539e-03	-1.774935e-02	4.728541e-01		34	 2	FALSE	 TRUE	109	 TRUE	0.4469764	0.2639739	0.5480306	0.4469764	0.6838149	0.4402366	0.5159773	0.4980443	U	0.4686274	0.5457943
13773	129	183705	183706	1	   7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.438855	3.569228	1.2269751	1906	Uncharacterized conserved protein	S	conserved hypothetical protein	1.347890	3.061222	1.0713569	4919	Ribosomal protein S30	J	ribosomal protein S30	 0.000000e+00	 0	8.274491e-03	 1.297741e-03	 6.271718e-02	 2.129509e-02	5.866408e-01		 2	 0	FALSE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175611	0.4787644	U	0.4686274	0.6162291
13773	129	183706	183707	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.347890	3.061222	1.0713569	4919	Ribosomal protein S30	J	ribosomal protein S30	1.391107	2.905490	0.9922133	1720	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.867642e-03	 6.239779e-03	 7.571945e-02	 3.918297e-01	8.912722e-02		 0	 9	FALSE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6305976	0.6113614	U	0.4686274	0.6162291
13773	129	183707	183708	1	  37	Divergent	-	+	 0.000000	0	  0.000000	 -0.70306007	1.391107	2.905490	0.9922133	1720	Uncharacterized conserved protein	S	conserved hypothetical protein	1.346898	3.298791	1.1437017	1055	Na+/H+ antiporter NhaD and related arsenite permeases	P	arsenite transport protein, conjectural	 3.145637e-02	 9	1.954355e-03	 6.299574e-03	 1.128935e-01	 3.948642e-01	9.283082e-02		 9	25	FALSE	 TRUE	106	FALSE	0.4469764	0.2245661	0.5480306	0.4469764	0.7702221	0.7437618	0.6320924	0.6099430	U	0.4686274	0.5333209
13773	129	183708	183709	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	 -2.96197163	1.346898	3.298791	1.1437017	1055	Na+/H+ antiporter NhaD and related arsenite permeases	P	arsenite transport protein, conjectural	1.480731	3.309522	1.0854886	159	Tryptophan synthase alpha chain	E	tryptophan synthase alpha subunit	-2.295409e-02	25	1.791104e-02	-3.065633e-03	-4.064985e-02	-2.967613e-01	1.369780e+00	0	25	41	 TRUE	 TRUE	107	FALSE	0.4469764	0.1909211	0.5480306	0.4469764	0.7766777	0.5246940	0.4409471	0.4210285	N	0.5492530	0.5314583
13773	129	183709	183710	1	   2	Same	-	-	23.586704	0	 36.152779	 32.32719398	1.480731	3.309522	1.0854886	159	Tryptophan synthase alpha chain	E	tryptophan synthase alpha subunit	1.336639	2.812730	0.9485866	512	Anthranilate/para-aminobenzoate synthases component II	EH	anthranilate synthase component II	 4.806863e-02	41	2.076235e-02	-3.366619e-03	 1.262976e-02	-3.152911e-01	1.489037e+00		41	52	FALSE	 TRUE	106	 TRUE	2.2645047	1.9871229	0.5480306	2.3225394	0.7731283	0.8373216	0.4362791	0.4173627	U	0.4686274	0.8960282
13773	129	183710	183711	1	  -9	Same	-	-	15.727291	0	 18.389878	 18.13791439	1.336639	2.812730	0.9485866	512	Anthranilate/para-aminobenzoate synthases component II	EH	anthranilate synthase component II	1.431241	3.156608	1.0954557	147	Anthranilate/para-aminobenzoate synthases component I	EH	anthranilate synthase component I	 1.064886e-03	12	8.949432e-03	 2.312546e-03	 1.536666e-02	 8.468562e-02	5.610619e-01		52	12	FALSE	 TRUE	105	 TRUE	2.5478634	1.9007066	0.5480306	2.6315452	0.7776747	0.4717501	0.5176821	0.4821849	U	0.4686274	0.8816988
13773	129	183711	183712	1	  -3	Same	-	-	13.530066	0	 16.192654	 16.04605033	1.431241	3.156608	1.0954557	147	Anthranilate/para-aminobenzoate synthases component I	EH	anthranilate synthase component I	1.441490	3.172287	1.0856574	547	Anthranilate phosphoribosyltransferase	E	anthranilate phosphoribosyltransferase	 2.419430e-02	12	1.050423e-04	 1.995726e-04	 2.228888e-02	-3.062771e-04	1.057598e-02		12	31	FALSE	 TRUE	104	 TRUE	2.6069365	1.8862425	0.5480306	2.6562892	0.7776747	0.7038371	0.5199787	0.6424418	U	0.4686274	0.8789861
13773	129	183712	183713	1	  41	Same	-	-	24.414383	0	 46.144461	 44.76493847	1.441490	3.172287	1.0856574	547	Anthranilate phosphoribosyltransferase	E	anthranilate phosphoribosyltransferase	1.384289	3.073505	1.0442475	1350	Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB)	R	tryptophan synthase beta subunit	 9.371434e-02	31	3.271872e-03	 6.645423e-04	 3.969375e-02	-1.698660e-03	3.095902e-01		31	47	FALSE	 TRUE	103	 TRUE	2.2568910	2.0368816	0.5480306	2.1990703	0.7752555	0.9855300	0.5199748	0.5385067	U	0.4686274	0.9018715
13773	129	183713	183714	1	 259	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.384289	3.073505	1.0442475	1350	Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB)	R	tryptophan synthase beta subunit	1.633981	3.543571	1.0842639	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	ABC transporter ATP-binding component	 0.000000e+00	 0	6.234577e-02	-1.225229e-02	-4.929163e-02	-5.078993e-01	2.164489e+00		47	 0	FALSE	 TRUE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4046095	0.4064935	U	0.4686274	0.6162291
13773	129	183714	183715	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.633981	3.543571	1.0842639	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	ABC transporter ATP-binding component	1.720677	3.754533	1.0415022	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid ABC transporter, ATP-binding protein, putative	 0.000000e+00	 0	7.516318e-03	 4.916808e-02	 6.951121e-01	 8.967487e-01	3.492148e-03	E	 0	14	FALSE	 TRUE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8041851	0.6477695	Y	1.4497162	0.7118045
13773	129	183715	183716	1	 161	Same	-	-	 2.079442	0	  2.079442	  2.07944154	1.720677	3.754533	1.0415022	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid ABC transporter, ATP-binding protein, putative	1.492286	3.332409	1.1391684	318	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	IQ	long-chain-fatty-acid--CoA ligase	 2.480582e-03	 3	5.216249e-02	 1.101197e-02	-3.041085e-02	 4.446254e-01	2.723510e-01		14	 3	FALSE	 TRUE	100	 TRUE	2.9335626	1.6614134	0.5480306	2.9479804	0.7136133	0.5047177	0.6530974	0.5529566	U	0.4686274	0.8396881
13773	129	183716	183717	1	  97	Same	-	-	 0.000000	0	  0.000000	 -0.13150953	1.492286	3.332409	1.1391684	318	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	IQ	long-chain-fatty-acid--CoA ligase	1.596366	3.533125	1.1433920	1804	Predicted acyl-CoA transferases/carnitine dehydratase	C	fatty acid co-A racemase, conjectural	 1.841759e-02	 3	1.083268e-02	 5.928471e-03	 1.391820e-01	 3.922343e-01	1.654485e-01		 3	17	FALSE	 TRUE	 99	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.7136133	0.6663050	0.6308958	0.5885871	U	0.4686274	0.5537552
13773	129	183717	183718	1	 -18	Same	-	-	 0.000000	0	  0.000000	 -0.24889054	1.596366	3.533125	1.1433920	1804	Predicted acyl-CoA transferases/carnitine dehydratase	C	fatty acid co-A racemase, conjectural	1.407270	2.975353	1.0280827	824	Predicted thioesterase	R	conserved hypothetical protein	-8.914191e-03	 8	3.575732e-02	-6.396592e-03	-1.024829e-01	-2.883882e-01	1.431540e+00		17	 8	FALSE	 TRUE	 98	 TRUE	0.4469764	0.2663985	0.5480306	0.4469764	0.7652913	0.5247582	0.4431184	0.4189018	U	0.4686274	0.5465600
13773	129	183718	183719	1	 219	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.407270	2.975353	1.0280827	824	Predicted thioesterase	R	conserved hypothetical protein	1.650018	3.583547	1.1112504	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	 8.021092e-03	 5	5.892646e-02	-8.763835e-03	 1.351329e-02	-3.117571e-01	1.603537e+00		 8	 5	FALSE	 TRUE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7448207	0.5795898	0.4370387	0.4146495	U	0.4686274	0.6162291
13773	129	183719	183720	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.08004271	1.650018	3.583547	1.1112504	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	1.620399	3.419666	0.9696495	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	 3.777386e-02	 1	8.772977e-04	 3.356887e-02	 3.855818e-01	 8.358808e-01	1.192714e-03		 5	 1	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.2967290	0.5480306	0.4469764	0.6329203	0.7874252	0.7917785	0.6516158	U	0.4686274	0.5561190
13773	129	183720	183721	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.620399	3.419666	0.9696495	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	1.668464	3.545638	1.0853747	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	 0.000000e+00	 0	2.310297e-03	 3.668642e-02	 4.968113e-01	 8.510286e-01	2.643996e-03		 1	 0	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7950987	0.6490066	U	0.4686274	0.6162291
13773	129	183721	183722	1	 375	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.668464	3.545638	1.0853747	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	1.419482	2.997837	1.0570901	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	 0.000000e+00	 0	6.199213e-02	-6.926884e-03	-1.773293e-01	-2.133031e-01	1.376975e+00	I	 0	 3	FALSE	 TRUE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4607302	0.4207387	Y	1.4497162	0.7118045
13773	129	183722	183723	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.419482	2.997837	1.0570901	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	1.376304	2.948863	1.0449166	2080	Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs	C	molybdopterin binding oxidoreductase small and medium subunit	 5.631536e-04	 1	1.864336e-03	 2.396120e-03	 6.048634e-02	 1.392683e-01	1.556100e-01	0	 3	 1	 TRUE	 TRUE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.5271079	0.5912363	N	0.5492530	0.6245624
13773	129	183723	183724	1	  -3	Same	-	-	 2.662588	0	  2.662588	  2.66258783	1.376304	2.948863	1.0449166	2080	Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs	C	molybdopterin binding oxidoreductase small and medium subunit	1.384304	3.019461	1.0766702	1529	Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs	C	molybdopterin binding oxidoreductase large subunit	 5.285113e-02	 1	6.399081e-05	 5.037626e-03	 7.675074e-02	 3.422293e-01	4.458099e-03	C	 1	 2	FALSE	 TRUE	 98	 TRUE	2.9244472	1.7076796	0.5480306	2.9399224	0.6329203	0.8555544	0.6095612	0.6467962	Y	1.4497162	0.8953487
13773	129	183724	183725	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.12361396	1.384304	3.019461	1.0766702	1529	Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs	C	molybdopterin binding oxidoreductase large subunit	1.455097	3.256751	1.0751396	1024	Enoyl-CoA hydratase/carnithine racemase	I	enoyl-CoA hydratase	 7.877708e-02	 2	5.011689e-03	-2.485087e-04	 6.436695e-03	-7.336514e-02	4.696930e-01	0	 2	 5	FALSE	 TRUE	 97	 TRUE	0.4469764	0.2928786	0.5480306	0.4469764	0.6838149	0.9476794	0.5003455	0.4991754	N	0.5492530	0.5636296
13773	129	183725	183726	1	 -72	Same	-	-	 0.000000	0	  0.000000	 -0.76090838	1.455097	3.256751	1.0751396	1024	Enoyl-CoA hydratase/carnithine racemase	I	enoyl-CoA hydratase	1.413578	2.975708	1.0490274	1012	NAD-dependent aldehyde dehydrogenases	C	aldehyde dehydrogenase	 1.712493e-02	 5	1.723805e-03	-1.400711e-04	 2.269644e-02	-3.668257e-02	1.673268e-01	0	 5	58	FALSE	 TRUE	 96	 TRUE	0.4469764	0.2203228	0.5480306	0.4469764	0.7448207	0.6537337	0.5100249	0.5882371	N	0.5492530	0.5407745
13773	129	183726	183727	1	 138	Divergent	-	+	 0.000000	0	  0.000000	 -0.75608581	1.413578	2.975708	1.0490274	1012	NAD-dependent aldehyde dehydrogenases	C	aldehyde dehydrogenase	1.356058	2.932633	0.9861445	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	 1.809586e-03	 7	3.308587e-03	 3.605047e-03	 8.233850e-02	 2.058889e-01	2.198840e-01	0	58	 7	FALSE	 TRUE	 95	FALSE	0.4469764	0.2207995	0.5480306	0.4469764	0.7596462	0.4911605	0.5516174	0.5744992	N	0.5492530	0.5409253
13773	129	183727	183728	1	 137	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.356058	2.932633	0.9861445	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	1.665645	3.450232	1.0550238	-	-	-	hypothetical protein	 0.000000e+00	 0	9.584426e-02	-2.042572e-02	-1.245927e-01	-7.057413e-01	2.863706e+00		 7	 0	 TRUE	 TRUE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3865283	0.4015264	U	0.4686274	0.6162291
13773	129	183728	183729	1	 479	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.665645	3.450232	1.0550238	-	-	-	hypothetical protein	1.656183	3.659926	1.1397275	-	-	-	hypothetical protein	 0.000000e+00	 0	8.953784e-05	 4.387672e-02	 5.236871e-01	 8.874461e-01	9.954005e-05		 0	 0	 TRUE	 TRUE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8027433	0.6550803	U	0.4686274	0.6162291
13773	129	183729	183730	1	  11	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.656183	3.659926	1.1397275	-	-	-	hypothetical protein	1.507435	3.309591	1.0323923	-	-	-	hypothetical protein	 0.000000e+00	 0	2.212597e-02	 1.147682e-02	 5.639943e-02	 5.177968e-01	1.478382e-01		 0	 0	 TRUE	 TRUE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6829633	0.5936859	U	0.4686274	0.6162291
13773	129	183730	183731	1	 168	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.507435	3.309591	1.0323923	-	-	-	hypothetical protein	1.355364	2.889434	1.0417522	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	 0.000000e+00	 0	2.312538e-02	-5.381614e-03	-2.674351e-02	-4.138981e-01	1.694193e+00		 0	 4	 TRUE	 TRUE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4167488	0.4122525	U	0.4686274	0.6162291
13773	129	183731	183732	1	  -3	Same	+	+	 7.133136	0	  9.795724	  9.79572415	1.355364	2.889434	1.0417522	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	1.373972	2.940550	1.0061524	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	 1.586742e-01	 4	3.462305e-04	 7.434628e-03	 9.946938e-02	 4.765577e-01	1.272758e-02	I	 4	 6	 TRUE	 TRUE	100	 TRUE	2.7473022	1.8342605	0.5480306	2.7696028	0.7323301	1.0926286	0.6651784	0.6416331	Y	1.4497162	0.9113169
13773	129	183732	183733	1	  -3	Same	+	+	 7.133136	0	  9.795724	  9.79572415	1.373972	2.940550	1.0061524	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	1.277148	2.642724	0.9188220	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	 1.586742e-01	 4	9.374909e-03	 1.349026e-02	 2.403508e-01	 6.191344e-01	1.135116e-01		 6	 4	 TRUE	 TRUE	101	 TRUE	2.7473022	1.8342605	0.5480306	2.7696028	0.7323301	1.0926286	0.7263909	0.6022559	U	0.4686274	0.8698043
13773	129	183733	183734	1	  -3	Same	+	+	 5.053695	0	  5.053695	  5.05369478	1.277148	2.642724	0.9188220	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	1.280044	2.666354	0.8613930	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	 8.678342e-02	 2	8.389362e-06	 2.985672e-02	 3.672887e-01	 9.440120e-01	9.423910e-06		 4	 2	 TRUE	 TRUE	102	 TRUE	2.8165621	1.7676464	0.5480306	2.8829874	0.6838149	0.9642105	0.8099780	0.6557762	U	0.4686274	0.8588497
13773	129	183734	183735	1	  -3	Same	+	+	 2.856470	0	  2.856470	  2.85647021	1.280044	2.666354	0.8613930	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved protein associated with acetyl-CoA C-acyltransferase	1.380022	2.913635	1.0094602	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	 1.728481e-02	 2	9.995512e-03	 1.222938e-02	 1.021019e-01	 5.650671e-01	1.502083e-01		 2	 6	 TRUE	 TRUE	103	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6838149	0.6558938	0.7051584	0.5931245	U	0.4686274	0.8518227
13773	129	183735	183736	1	 387	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.380022	2.913635	1.0094602	1960	Acyl-CoA dehydrogenases	I	acyl-CoA dehydrogenase	1.526711	3.254370	1.0135603	-	-	-	paREP7	 0.000000e+00	 0	2.151787e-02	-5.375573e-03	-4.064460e-02	-3.840132e-01	1.541943e+00		 6	 0	 TRUE	 TRUE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4218475	0.4157486	U	0.4686274	0.6162291
13773	129	183736	183737	1	 408	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.526711	3.254370	1.0135603	-	-	-	paREP7	1.581087	3.609700	1.1630527	-	-	-	hypothetical protein	 0.000000e+00	 0	2.956707e-03	 9.768357e-03	 1.632617e-01	 5.464219e-01	2.876708e-02		 0	 0	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6969337	0.6337043	U	0.4686274	0.6162291
13773	129	183737	183738	1	 780	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.581087	3.609700	1.1630527	-	-	-	hypothetical protein	1.455402	3.115528	1.0506060	-	-	-	hypothetical protein	 0.000000e+00	 0	1.579668e-02	 5.199736e-04	-1.585775e-02	 1.106838e-01	4.834678e-01		 0	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5200033	0.4957719	U	0.4686274	0.6162291
13773	129	183738	183739	1	  43	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.455402	3.115528	1.0506060	-	-	-	hypothetical protein	1.483992	3.330573	1.1092369	135	Phosphoribosylanthranilate isomerase	E	phosphoribosyl anthranilate isomerase	 0.000000e+00	 0	8.173616e-04	 1.306960e-04	 2.492369e-02	 5.339470e-02	7.092023e-02		 0	42	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187710	0.6175203	U	0.4686274	0.6162291
13773	129	183739	183740	1	 382	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.483992	3.330573	1.1092369	135	Phosphoribosylanthranilate isomerase	E	phosphoribosyl anthranilate isomerase	2.047544	4.271052	1.1346517	-	-	-	paREP13	 0.000000e+00	 0	3.175918e-01	 1.943381e-02	 1.147798e+00	 3.995396e-01	3.592636e-01		42	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6348076	0.5214465	U	0.4686274	0.6162291
13773	129	183740	183741	1	-194	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	2.047544	4.271052	1.1346517	-	-	-	paREP13	1.444028	3.411617	1.0857366	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein, frameshift	 0.000000e+00	 0	3.642322e-01	-4.390606e-03	-9.329940e-01	 2.607360e-02	9.469993e-01		 0	 0	 TRUE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173851	0.4429071	U	0.4686274	0.6162291
13773	129	183741	183742	1	 146	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.444028	3.411617	1.0857366	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein, frameshift	1.426072	3.186326	1.1059304	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.224000e-04	 1.864827e-04	 2.440849e-02	-4.245472e-03	3.564359e-02		 0	 0	FALSE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197926	0.6297015	U	0.4686274	0.6162291
13773	129	183742	183743	1	  57	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.426072	3.186326	1.1059304	-	-	-	conserved within P. aerophilum	1.533153	3.188659	1.0302539	-	-	-	hypothetical protein	 0.000000e+00	 0	1.146632e-02	-2.070209e-03	 1.188013e-02	-1.122553e-01	7.270082e-01		 0	 0	FALSE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4876857	0.4621159	U	0.4686274	0.6162291
13773	129	183743	183744	1	  50	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.533153	3.188659	1.0302539	-	-	-	hypothetical protein	1.470267	3.285697	1.0997870	2445	Uncharacterized conserved protein	S	paREP11	 0.000000e+00	 0	3.954655e-03	 1.543183e-03	 2.270966e-02	 1.885041e-01	1.736644e-01		 0	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5457001	0.5866463	U	0.4686274	0.6162291
13773	129	183744	183745	1	 -12	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.470267	3.285697	1.0997870	2445	Uncharacterized conserved protein	S	paREP11	1.296562	2.775444	0.9720906	1533	DNA repair photolyase	L	conserved hypothetical protein	 0.000000e+00	 0	3.017344e-02	-2.922341e-03	 4.654259e-02	-2.600057e-01	1.500296e+00		 0	 4	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4505180	0.4170968	U	0.4686274	0.6162291
13773	129	183745	183746	1	 187	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.296562	2.775444	0.9720906	1533	DNA repair photolyase	L	conserved hypothetical protein	1.785687	3.482784	1.0691554	-	-	-	paREP7	 0.000000e+00	 0	2.392432e-01	-5.175898e-02	-3.615243e-01	-9.406947e-01	3.764136e+00		 4	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3779345	0.3989958	U	0.4686274	0.6162291
13773	129	183746	183747	1	 372	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.785687	3.482784	1.0691554	-	-	-	paREP7	1.489346	3.259215	1.0929864	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	8.781829e-02	 1.268740e-02	-1.110567e-01	 4.346920e-01	3.011087e-01		 0	 0	 TRUE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6495201	0.5411666	U	0.4686274	0.6162291
13773	129	183747	183748	1	 108	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.489346	3.259215	1.0929864	-	-	-	conserved hypothetical protein	1.435255	3.349167	1.0917653	4243	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	2.925797e-03	-6.124764e-04	 1.057987e-02	-2.632452e-02	2.496164e-01		 0	 0	FALSE	 TRUE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5132638	0.5628925	U	0.4686274	0.6162291
13773	129	183748	183749	1	  66	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.435255	3.349167	1.0917653	4243	Predicted membrane protein	S	conserved hypothetical protein	1.497971	3.524689	1.1746551	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.933312e-03	-7.516732e-04	 1.679710e-02	-2.958637e-02	3.070334e-01		 0	 0	 TRUE	 TRUE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5122699	0.5396610	U	0.4686274	0.6162291
13773	129	183749	183750	1	  47	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.497971	3.524689	1.1746551	-	-	-	conserved within P. aerophilum	1.393321	2.941650	1.0400189	4992	Ornithine/acetylornithine aminotransferase	E	acetylornithine aminotransferase (argD)	 0.000000e+00	 0	1.095160e-02	-2.704875e-03	-7.834006e-03	-2.325185e-01	9.306400e-01		 0	37	 TRUE	 TRUE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4561508	0.4448241	U	0.4686274	0.6162291
13773	129	183750	183751	1	  30	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.393321	2.941650	1.0400189	4992	Ornithine/acetylornithine aminotransferase	E	acetylornithine aminotransferase (argD)	1.683119	3.958646	1.1256252	-	-	-	hypothetical protein	 0.000000e+00	 0	8.398299e-02	-1.345674e-02	-8.801744e-03	-4.524001e-01	2.050853e+00		37	 0	FALSE	 TRUE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4113045	0.4076071	U	0.4686274	0.6162291
13773	129	183751	183752	1	  50	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.683119	3.958646	1.1256252	-	-	-	hypothetical protein	1.309833	2.744578	0.9996689	1531	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	1.393428e-01	-3.280320e-02	-4.482813e-01	-8.878260e-01	3.552777e+00		 0	 0	 TRUE	 TRUE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3798546	0.3995439	U	0.4686274	0.6162291
13773	129	183752	183753	1	  66	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.309833	2.744578	0.9996689	1531	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.403393	3.115893	1.0785792	62	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	8.753522e-03	 6.794834e-03	 5.514597e-02	 3.535716e-01	2.919151e-01		 0	42	 TRUE	 TRUE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6139438	0.5460473	U	0.4686274	0.6162291
13773	129	183753	183754	1	  18	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.403393	3.115893	1.0785792	62	Uncharacterized conserved protein	S	conserved hypothetical protein	1.448060	3.069529	1.0008530	-	-	-	paREP8	 0.000000e+00	 0	1.995137e-03	 1.599704e-04	 1.678536e-02	-2.468829e-02	2.001927e-01		42	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5139316	0.5800294	U	0.4686274	0.6162291
13773	129	183754	183755	1	  62	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.448060	3.069529	1.0008530	-	-	-	paREP8	1.542144	3.417951	1.0551868	-	-	-	hypothetical protein	 0.000000e+00	 0	8.851715e-03	-3.024487e-04	 3.808783e-02	 4.655647e-02	4.325864e-01		 0	 0	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186386	0.5070154	U	0.4686274	0.6162291
13773	129	183755	183756	1	   7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.542144	3.417951	1.0551868	-	-	-	hypothetical protein	1.554297	3.392551	1.1192120	675	Transposase and inactivated derivatives	L	paREP12	 0.000000e+00	 0	1.477029e-04	 9.338633e-03	 1.359045e-01	 5.475928e-01	1.301089e-03		 0	 0	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6980958	0.6513850	U	0.4686274	0.6162291
13773	129	183756	183757	1	 560	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.554297	3.392551	1.1192120	675	Transposase and inactivated derivatives	L	paREP12	1.447747	3.257610	1.0962097	-	-	-	hypothetical protein	 0.000000e+00	 0	1.135291e-02	-3.751770e-04	-1.050675e-02	 4.597219e-02	4.866749e-01		 0	 0	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186259	0.4946318	U	0.4686274	0.6162291
13773	129	183757	183758	1	 215	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.447747	3.257610	1.0962097	-	-	-	hypothetical protein	1.449362	3.469730	1.1312199	3374	Predicted membrane protein	S	conserved hypothetical protein	 0.000000e+00	 0	2.607647e-06	 7.405050e-06	 2.080099e-02	 4.559995e-03	2.126270e-04		 0	 2	 TRUE	 TRUE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195797	0.6544230	U	0.4686274	0.6162291
13773	129	183758	183759	1	 197	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.449362	3.469730	1.1312199	3374	Predicted membrane protein	S	conserved hypothetical protein	1.494680	3.583421	1.1916444	4732	Predicted membrane protein	S	conserved hypothetical protein	 7.508473e-04	 2	2.053709e-03	-8.791843e-05	 2.445764e-02	 3.549869e-02	1.574317e-01		 2	 2	FALSE	 TRUE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4618072	0.5176263	0.5905561	U	0.4686274	0.6162291
13773	129	183759	183760	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.494680	3.583421	1.1916444	4732	Predicted membrane protein	S	conserved hypothetical protein	1.478569	3.344013	1.1022495	-	-	-	conserved hypothetical protein	 3.728161e-04	 1	2.595468e-04	 1.176377e-03	 3.160938e-02	 1.673510e-01	1.378777e-02		 2	 1	 TRUE	 TRUE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.5377629	0.6411621	U	0.4686274	0.6162291
13773	129	183760	183761	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.478569	3.344013	1.1022495	-	-	-	conserved hypothetical protein	1.430975	3.145717	1.0825221	1122	ABC-type cobalt transport system, ATPase component	P	ribose ABC transporter, ATP-binding protein, putative	 3.728161e-04	 1	2.265243e-03	-5.548929e-04	 1.343290e-02	-3.700770e-02	2.106268e-01		 1	 2	 TRUE	 TRUE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.5097593	0.5759811	U	0.4686274	0.6162291
13773	129	183761	183762	1	 -28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430975	3.145717	1.0825221	1122	ABC-type cobalt transport system, ATPase component	P	ribose ABC transporter, ATP-binding protein, putative	1.380133	3.531618	1.1744893	-	-	-	hypothetical protein	 0.000000e+00	 0	2.584820e-03	 1.454991e-03	 4.958648e-02	 6.071826e-02	2.278725e-01		 2	 0	 TRUE	 TRUE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184940	0.5715668	U	0.4686274	0.6162291
13773	129	183762	183763	1	  78	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.380133	3.531618	1.1744893	-	-	-	hypothetical protein	1.403056	3.016718	1.0610696	1992	Uncharacterized conserved protein	S	phosphomethylpyrimidine kinase	 0.000000e+00	 0	5.254431e-04	 3.444451e-03	 5.404924e-02	 2.236753e-01	3.890249e-02		 0	10	 TRUE	 TRUE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5585739	0.6284750	U	0.4686274	0.6162291
13773	129	183763	183764	1	  26	Convergent	+	-	 0.000000	0	  0.000000	 -0.40570826	1.403056	3.016718	1.0610696	1992	Uncharacterized conserved protein	S	phosphomethylpyrimidine kinase	1.438818	3.079294	1.0498586	212	5-formyltetrahydrofolate cyclo-ligase	H	conserved hypothetical protein	 1.181248e-01	 6	1.278954e-03	 6.078040e-04	 2.231241e-02	 1.091819e-02	1.268081e-01		10	 6	 TRUE	 TRUE	112	FALSE	0.4469764	0.2413468	0.5480306	0.4469764	0.7537284	1.0524713	0.5188131	0.5988589	U	0.4686274	0.5386384
13773	129	183764	183765	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.438818	3.079294	1.0498586	212	5-formyltetrahydrofolate cyclo-ligase	H	conserved hypothetical protein	1.401938	3.307530	1.1509646	1030	Membrane-bound serine protease (ClpP class)	O	conserved hypothetical protein	 0.000000e+00	 0	1.360142e-03	 6.218574e-04	 3.381807e-02	 1.131046e-02	1.368375e-01	0	 6	 0	FALSE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187697	0.5965788	N	0.5492530	0.6245624
13773	129	183765	183766	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.401938	3.307530	1.1509646	1030	Membrane-bound serine protease (ClpP class)	O	conserved hypothetical protein	1.499295	3.362662	1.1385525	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	 0.000000e+00	 0	9.478243e-03	-2.368958e-03	-7.344698e-03	-2.008371e-01	8.145651e-01		 0	 3	 TRUE	 TRUE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4643861	0.4536353	U	0.4686274	0.6162291
13773	129	183766	183767	1	 271	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.499295	3.362662	1.1385525	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein	1.461588	3.376532	1.1301500	-	-	-	hypothetical protein	 0.000000e+00	 0	1.421763e-03	 4.883857e-04	 2.088489e-02	 9.945112e-02	9.423910e-02		 3	 0	FALSE	 TRUE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186154	0.6091015	U	0.4686274	0.6162291
13773	129	183767	183768	1	 -64	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.461588	3.376532	1.1301500	-	-	-	hypothetical protein	1.402521	3.163052	1.1240829	4880	Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats	R	conserved hypothetical protein	 0.000000e+00	 0	3.488973e-03	-4.982769e-04	 2.071326e-02	-7.750224e-02	3.483083e-01		 0	 2	 TRUE	 TRUE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4988628	0.5251543	U	0.4686274	0.6162291
13773	129	183768	183769	1	 257	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.402521	3.163052	1.1240829	4880	Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats	R	conserved hypothetical protein	1.472702	3.227297	1.0643772	1708	Predicted nucleotidyltransferases	R	paREP11	 0.000000e+00	 0	4.925448e-03	-1.041440e-03	 3.648521e-03	-1.142932e-01	4.675915e-01		 2	 0	 TRUE	 TRUE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4868677	0.4996268	U	0.4686274	0.6162291
13773	129	183769	183770	1	  33	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.472702	3.227297	1.0643772	1708	Predicted nucleotidyltransferases	R	paREP11	1.515578	3.332004	1.1763955	-	-	-	hypothetical protein	 0.000000e+00	 0	1.838357e-03	 1.367768e-03	 4.603909e-02	 1.736721e-01	9.376850e-02		 0	 0	 TRUE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5394670	0.6094409	U	0.4686274	0.6162291
13773	129	183770	183771	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.515578	3.332004	1.1763955	-	-	-	hypothetical protein	1.460108	4.043885	1.2814136	-	-	-	hypothetical protein	 0.000000e+00	 0	3.076924e-03	 5.594169e-04	 1.700920e-02	 1.090606e-01	1.717508e-01		 0	 0	FALSE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197664	0.5873404	U	0.4686274	0.6162291
13773	129	183771	183772	1	  20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.460108	4.043885	1.2814136	-	-	-	hypothetical protein	1.395764	3.073792	1.0597806	-	-	-	hypothetical protein	 0.000000e+00	 0	4.140255e-03	-4.848424e-04	 2.273466e-02	-8.410840e-02	4.136178e-01		 0	 0	 TRUE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4970159	0.5101580	U	0.4686274	0.6162291
13773	129	183772	183773	1	  72	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.395764	3.073792	1.0597806	-	-	-	hypothetical protein	1.541634	3.367028	1.0812058	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	2.127826e-02	-5.020062e-03	-2.513651e-02	-3.321928e-01	1.396859e+00		 0	 1	FALSE	 TRUE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4316239	0.4197398	U	0.4686274	0.6162291
13773	129	183773	183774	1	 -10	Same	+	+	 2.662588	0	  2.662588	  2.66258783	1.541634	3.367028	1.0812058	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.426140	3.081344	1.0662925	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 7.158483e-02	 1	1.333890e-02	-2.278839e-03	-2.496826e-02	-1.162675e-01	7.789451e-01		 1	 1	 TRUE	 TRUE	114	 TRUE	2.9244472	1.7076796	0.5480306	2.9399224	0.6329203	0.9205230	0.4862809	0.4575852	U	0.4686274	0.8476113
13773	129	183774	183775	1	 485	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.426140	3.081344	1.0662925	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.495735	3.522656	1.1760911	730	Predicted permeases	R	conserved hypothetical protein	 9.520652e-04	 1	4.843488e-03	-1.119767e-03	 1.101895e-02	-7.705814e-02	4.086967e-01		 1	 5	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4684288	0.4991300	0.5107204	U	0.4686274	0.6162291
13773	129	183775	183776	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.495735	3.522656	1.1760911	730	Predicted permeases	R	conserved hypothetical protein	1.508732	3.650826	1.1573022	-	-	-	hypothetical protein	 0.000000e+00	 0	1.689025e-04	 2.542543e-03	 5.382171e-02	 2.675018e-01	6.617941e-03		 5	 0	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5767111	0.6448898	U	0.4686274	0.6162291
13773	129	183776	183777	1	 532	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.508732	3.650826	1.1573022	-	-	-	hypothetical protein	1.387368	2.959396	1.0353109	174	Glutamine synthetase	E	glutamine synthetase	 0.000000e+00	 0	1.472924e-02	-3.671133e-03	-2.012538e-02	-2.941232e-01	1.177633e+00		 0	23	 TRUE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4420385	0.4293379	U	0.4686274	0.6162291
13773	129	183777	183778	1	 298	Same	+	+	 0.000000	0	  0.000000	 -0.15206951	1.387368	2.959396	1.0353109	174	Glutamine synthetase	E	glutamine synthetase	1.366014	2.861802	0.9996254	17	Aspartyl/asparaginyl-tRNA synthetases	J	asparaginyl-tRNA synthetase	 1.599790e-02	 1	4.559767e-04	 5.466417e-03	 9.275442e-02	 3.619047e-01	2.647176e-02	0	23	 1	 TRUE	 TRUE	118	 TRUE	0.4469764	0.2765129	0.5480306	0.4469764	0.6329203	0.6457313	0.6161683	0.6347546	N	0.5492530	0.5584944
13773	129	183778	183779	1	 104	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.366014	2.861802	0.9996254	17	Aspartyl/asparaginyl-tRNA synthetases	J	asparaginyl-tRNA synthetase	1.449540	3.559671	1.2209676	477	Permeases of the major facilitator superfamily	GEPR	tetracycline resistance protein	 4.041771e-03	 1	6.976549e-03	 1.582254e-04	 4.084509e-03	-5.388945e-02	5.878170e-01		 1	19	 TRUE	 TRUE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5366044	0.5055660	0.4784697	U	0.4686274	0.6162291
13773	129	183779	183780	1	  42	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.449540	3.559671	1.2209676	477	Permeases of the major facilitator superfamily	GEPR	tetracycline resistance protein	1.452109	3.193011	1.0786093	-	-	-	hypothetical protein	 0.000000e+00	 0	6.601290e-06	-1.327057e-06	 2.071475e-02	 8.110453e-03	6.414149e-04		19	 0	FALSE	 TRUE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190898	0.6527891	U	0.4686274	0.6162291
13773	129	183780	183781	1	 130	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.452109	3.193011	1.0786093	-	-	-	hypothetical protein	1.348715	2.725685	1.0158992	1146	Ferredoxin	C	adenylylsulfate reductase beta subunit part 1, authentic frameshift	 0.000000e+00	 0	1.069027e-02	-7.352588e-05	 4.664999e-02	-8.158161e-02	7.939179e-01		 0	 2	FALSE	 TRUE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4974887	0.4559908	U	0.4686274	0.6162291
13773	129	183781	183782	1	   3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.348715	2.725685	1.0158992	1146	Ferredoxin	C	adenylylsulfate reductase beta subunit part 1, authentic frameshift	1.332370	2.947806	1.0110938	1146	Ferredoxin	C	adenylylsulfate reductase beta subunit part 2, authentic frameshift	 0.000000e+00	 0	2.671711e-04	 1.222101e-02	 1.728317e-01	 6.798468e-01	5.772734e-03	C	 2	 0	 TRUE	 TRUE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7456945	0.6458271	Y	1.4497162	0.7118045
13773	129	183782	183783	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.332370	2.947806	1.0110938	1146	Ferredoxin	C	adenylylsulfate reductase beta subunit part 2, authentic frameshift	1.319150	2.857916	1.0119104	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	adenylylsulfate reductase alpha subunit part 1, authentic frameshift	 0.000000e+00	 0	1.747689e-04	 1.573997e-02	 2.132094e-01	 7.779144e-01	1.414176e-03	C	 0	 1	 TRUE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7767975	0.6511912	Y	1.4497162	0.7118045
13773	129	183783	183784	1	   7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.319150	2.857916	1.0119104	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	adenylylsulfate reductase alpha subunit part 1, authentic frameshift	1.312458	2.770860	0.9407806	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	adenylylsulfate reductase alpha subunit part 2, authentic frameshift	 0.000000e+00	 0	4.477548e-05	 1.837312e-02	 2.401695e-01	 8.249350e-01	2.126270e-04	C	 1	 0	 TRUE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7898880	0.6544230	Y	1.4497162	0.7118045
13773	129	183784	183785	1	  96	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.312458	2.770860	0.9407806	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	adenylylsulfate reductase alpha subunit part 2, authentic frameshift	1.410624	2.935173	1.0236374	622	Predicted phosphoesterase	R	conserved hypothetical protein	 0.000000e+00	 0	9.636503e-03	 5.664192e-03	 4.216630e-02	 2.831761e-01	3.675914e-01		 0	14	 TRUE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5859515	0.5196393	U	0.4686274	0.6162291
13773	129	183785	183786	1	   9	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.410624	2.935173	1.0236374	622	Predicted phosphoesterase	R	conserved hypothetical protein	1.328405	2.712864	0.9203653	2920	Dissimilatory sulfite reductase (desulfoviridin), gamma subunit	P	siroheme-sulfite reductase gamma subunit homolog	 6.432019e-04	 4	6.760045e-03	 5.014084e-03	 1.135558e-01	 2.696464e-01	3.164602e-01		14	 4	 TRUE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.4592152	0.5794887	0.5367838	U	0.4686274	0.6162291
13773	129	183786	183787	1	 131	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.328405	2.712864	0.9203653	2920	Dissimilatory sulfite reductase (desulfoviridin), gamma subunit	P	siroheme-sulfite reductase gamma subunit homolog	1.375551	3.017219	1.0285430	2044	Predicted peroxiredoxins	R	conserved hypothetical protein	 3.090486e-03	 4	2.222782e-03	 9.327666e-03	 1.059937e-01	 5.459837e-01	6.031303e-02		 4	 4	FALSE	 TRUE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.5166149	0.6961613	0.6204913	U	0.4686274	0.6162291
13773	129	183787	183788	1	   1	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.375551	3.017219	1.0285430	2044	Predicted peroxiredoxins	R	conserved hypothetical protein	1.372874	2.931209	1.0226173	-	-	-	glutathione-S-transferase homolog	 0.000000e+00	 0	7.167937e-06	 5.955046e-03	 9.141526e-02	 4.008366e-01	1.908342e-04		 4	 0	 TRUE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6360246	0.6545960	U	0.4686274	0.6162291
13773	129	183788	183789	1	 207	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.372874	2.931209	1.0226173	-	-	-	glutathione-S-transferase homolog	1.424391	3.095209	1.0821613	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase beta subunit	 0.000000e+00	 0	2.654017e-03	 2.120180e-03	 3.172226e-02	 1.144546e-01	2.127454e-01		 0	 3	FALSE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5209588	0.5756211	U	0.4686274	0.6162291
13773	129	183789	183790	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.06453852	1.424391	3.095209	1.0821613	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase beta subunit	1.407052	2.975161	1.0253400	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase alpha subunit	 4.578021e-02	 1	3.006382e-04	 1.197297e-03	 3.787823e-02	 6.052094e-02	2.548225e-02	C	 3	 1	FALSE	 TRUE	120	 TRUE	0.4469764	0.3032773	0.5480306	0.4469764	0.6329203	0.8313457	0.5185395	0.6352777	Y	1.4497162	0.6602392
13773	129	183790	183791	1	 143	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.407052	2.975161	1.0253400	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase alpha subunit	1.388665	2.945437	1.0170421	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase	 0.000000e+00	 0	3.380939e-04	 2.781434e-03	 5.825857e-02	 1.727314e-01	2.955338e-02	0	 1	 0	FALSE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5388957	0.6332836	N	0.5492530	0.6245624
13773	129	183791	183792	1	 105	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.388665	2.945437	1.0170421	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase	1.726880	3.748294	1.0150510	-	-	-	hypothetical protein	 0.000000e+00	 0	1.143894e-01	-1.728081e-02	 1.423773e-03	-5.001770e-01	2.221312e+00		 0	 0	FALSE	 TRUE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4052864	0.4055375	U	0.4686274	0.6162291
13773	129	183792	183793	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.726880	3.748294	1.0150510	-	-	-	hypothetical protein	1.590293	3.327726	1.0147741	175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related e	EH	phosphoadenosine phosphosulfate reductase (PAPS reductase)	 0.000000e+00	 0	1.865588e-02	 3.826515e-02	 3.244092e-01	 8.318733e-01	1.722279e-02		 0	28	FALSE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7908326	0.6392215	U	0.4686274	0.6162291
13773	129	183793	183794	1	   2	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.590293	3.327726	1.0147741	175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related e	EH	phosphoadenosine phosphosulfate reductase (PAPS reductase)	1.630585	3.634120	1.0483722	-	-	-	hypothetical protein	 0.000000e+00	 0	1.623468e-03	 2.488987e-02	 3.443051e-01	 7.751991e-01	4.155945e-03		28	 0	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7754102	0.6472310	U	0.4686274	0.6162291
13773	129	183794	183795	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.630585	3.634120	1.0483722	-	-	-	hypothetical protein	1.664315	3.592628	1.0868482	155	Sulfite reductase, beta subunit (hemoprotein)	P	ferredoxin-nitrite reductase	 0.000000e+00	 0	1.137677e-03	 3.815401e-02	 5.004321e-01	 8.628120e-01	9.900996e-04		 0	33	FALSE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7970027	0.6518633	U	0.4686274	0.6162291
13773	129	183795	183796	1	 110	Divergent	-	+	 2.856470	0	  2.856470	  2.76945883	1.664315	3.592628	1.0868482	155	Sulfite reductase, beta subunit (hemoprotein)	P	ferredoxin-nitrite reductase	1.640701	3.990078	1.1174448	730	Predicted permeases	R	conserved hypothetical protein	 2.229338e-02	 2	5.575930e-04	 4.030794e-02	 4.679090e-01	 8.700625e-01	5.660236e-04		33	 2	FALSE	 TRUE	114	FALSE	2.8950318	1.7153274	0.5480306	2.9213001	0.6838149	0.6943202	0.7993894	0.6530578	U	0.4686274	0.8493330
13773	129	183796	183797	1	  97	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.640701	3.990078	1.1174448	730	Predicted permeases	R	conserved hypothetical protein	1.725507	3.732178	1.0402171	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	 3.728161e-04	 1	7.192024e-03	 5.189218e-02	 7.272807e-01	 9.018682e-01	3.402032e-03		 2	 1	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.8056295	0.6479144	U	0.4686274	0.6162291
13773	129	183797	183798	1	  -9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.725507	3.732178	1.0402171	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	1.685775	3.453720	1.0463321	2897	Rhodanese-related sulfurtransferase	P	thiosulfate sulfurtransferase	 0.000000e+00	 0	1.578681e-03	 6.424738e-02	 7.206282e-01	 9.424523e-01	2.850733e-04	0	 1	 0	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8094937	0.6540676	N	0.5492530	0.6245624
13773	129	183798	183799	1	 187	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.685775	3.453720	1.0463321	2897	Rhodanese-related sulfurtransferase	P	thiosulfate sulfurtransferase	1.336930	2.932055	1.0411641	-	-	-	paREP1	 0.000000e+00	 0	1.216923e-01	-2.682792e-02	-3.991775e-01	-8.154133e-01	3.274905e+00		 0	 0	 TRUE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3820080	0.4002278	U	0.4686274	0.6162291
13773	129	183799	183800	1	 191	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.336930	2.932055	1.0411641	-	-	-	paREP1	1.361973	2.994409	1.0502327	1797	Cobyrinic acid a,c-diamide synthase	H	cobyrinic acid a,c-diamide synthase (cbiA) part 2, authentic frameshift	 0.000000e+00	 0	6.271531e-04	 1.023518e-02	 1.274440e-01	 6.040821e-01	1.803795e-02		 0	20	 TRUE	 TRUE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7213853	0.6386975	U	0.4686274	0.6162291
13773	129	183800	183801	1	  84	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.361973	2.994409	1.0502327	1797	Cobyrinic acid a,c-diamide synthase	H	cobyrinic acid a,c-diamide synthase (cbiA) part 2, authentic frameshift	1.450176	3.503389	1.1989552	-	-	-	cobyrinic acid a,c-diamide synthase (cbiA) part 1, authentic frameshift	 0.000000e+00	 0	7.779717e-03	 1.088055e-04	 1.708108e-03	-6.073651e-02	6.370563e-01		20	 0	FALSE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5036415	0.4715010	U	0.4686274	0.6162291
13773	129	183801	183802	1	  50	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.450176	3.503389	1.1989552	-	-	-	cobyrinic acid a,c-diamide synthase (cbiA) part 1, authentic frameshift	1.348888	2.971342	1.0362232	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	1.025927e-02	 1.247277e-04	 4.887551e-02	-6.681670e-02	7.560856e-01		 0	 1	FALSE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5018373	0.4589254	U	0.4686274	0.6162291
13773	129	183802	183803	1	  77	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.348888	2.971342	1.0362232	-	-	-	conserved hypothetical protein	1.475735	3.213049	1.0244982	-	-	-	hypothetical protein	 0.000000e+00	 0	1.609028e-02	-2.495237e-03	-3.361573e-02	-2.570336e-01	1.236653e+00		 1	 0	FALSE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4511785	0.4267515	U	0.4686274	0.6162291
13773	129	183803	183804	1	  42	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.475735	3.213049	1.0244982	-	-	-	hypothetical protein	1.448814	3.231571	1.1007316	1587	Uroporphyrinogen-III synthase	H	uroporphyrinogen-III synthase (hemD), conjectural	 0.000000e+00	 0	7.247710e-04	-6.277824e-05	 1.851574e-02	 2.313806e-02	6.609990e-02		 0	 0	FALSE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174534	0.6187763	U	0.4686274	0.6162291
13773	129	183804	183805	1	 -56	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.448814	3.231571	1.1007316	1587	Uroporphyrinogen-III synthase	H	uroporphyrinogen-III synthase (hemD), conjectural	1.303702	2.910906	0.9963818	1587	Uroporphyrinogen-III synthase	H	uroporphyrinogen-III synthase (hemD), conjectural	 0.000000e+00	 0	2.105745e-02	 3.808861e-04	 8.056744e-02	-6.610873e-02	1.013862e+00	H	 0	 5	 TRUE	 TRUE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5020788	0.4384021	Y	1.4497162	0.7118045
13773	129	183805	183806	1	  60	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.303702	2.910906	0.9963818	1587	Uroporphyrinogen-III synthase	H	uroporphyrinogen-III synthase (hemD), conjectural	1.383255	2.893819	1.0218698	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase alpha subunit	 1.917743e-03	 2	6.328706e-03	 1.006330e-02	 9.479767e-02	 5.231213e-01	1.425743e-01	0	 5	 2	FALSE	 TRUE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4923490	0.6855540	0.5949759	N	0.5492530	0.6245624
13773	129	183806	183807	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.383255	2.893819	1.0218698	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase alpha subunit	1.377029	2.967117	1.0294300	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase beta subunit	 3.728161e-04	 1	3.875986e-05	 5.066944e-03	 8.223480e-02	 3.413152e-01	2.723510e-03	C	 2	 1	 TRUE	 TRUE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.6087492	0.6489041	Y	1.4497162	0.7118045
13773	129	183807	183808	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.377029	2.967117	1.0294300	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	sulfite reductase beta subunit	1.511308	3.318708	1.0549514	-	-	-	hypothetical protein	 0.000000e+00	 0	1.803074e-02	-4.455498e-03	-3.628408e-02	-3.483478e-01	1.395046e+00		 1	 0	 TRUE	 TRUE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4282296	0.4198811	U	0.4686274	0.6162291
13773	129	183808	183809	1	 140	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.511308	3.318708	1.0549514	-	-	-	hypothetical protein	1.377458	3.166645	1.0819179	-	-	-	hypothetical protein	 0.000000e+00	 0	1.791582e-02	-4.429818e-03	-2.629155e-02	-3.452844e-01	1.382384e+00		 0	 0	 TRUE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4288342	0.4206426	U	0.4686274	0.6162291
13773	129	183809	183810	1	 -22	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.377458	3.166645	1.0819179	-	-	-	hypothetical protein	1.418660	3.065875	1.0343557	-	-	-	hypothetical protein	 0.000000e+00	 0	1.697609e-03	 2.420085e-03	 3.787307e-02	 1.398797e-01	1.402655e-01		 0	 0	 TRUE	 TRUE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5275007	0.5956690	U	0.4686274	0.6162291
13773	129	183810	183811	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.418660	3.065875	1.0343557	-	-	-	hypothetical protein	1.557715	3.393217	1.1056643	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	 0.000000e+00	 0	1.933627e-02	-3.480215e-03	 6.032795e-03	-1.774646e-01	9.984657e-01		 0	21	FALSE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4714416	0.4393668	U	0.4686274	0.6162291
13773	129	183811	183812	1	 125	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.557715	3.393217	1.1056643	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	1.560840	3.375615	1.1221703	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	 4.547022e-03	 1	9.767960e-06	 1.163671e-02	 1.585099e-01	 6.007855e-01	1.908342e-04	O	21	 1	FALSE	 TRUE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5418901	0.7201436	0.6545960	Y	1.4497162	0.7118045
13773	129	183812	183813	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.560840	3.375615	1.1221703	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	1.360011	2.945558	1.0501620	709	Selenophosphate synthase	E	conserved protein with C terminal acylphosphatase domain	 3.728161e-04	 1	4.033228e-02	-1.000147e-02	-1.054162e-01	-5.647744e-01	2.262681e+00	0	 1	 2	 TRUE	 TRUE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.3975280	0.4053266	N	0.5492530	0.6245624
13773	129	183813	183814	1	  -3	Same	+	+	 2.856470	0	  2.856470	  2.85647021	1.360011	2.945558	1.0501620	709	Selenophosphate synthase	E	conserved protein with C terminal acylphosphatase domain	1.449517	3.076755	1.0360340	2210	Uncharacterized conserved protein	S	conserved hypothetical protein	 5.285113e-02	 1	8.011183e-03	 1.714479e-04	 1.544926e-03	-5.542437e-02	6.382820e-01		 2	 1	 TRUE	 TRUE	118	 TRUE	2.8950318	1.7307027	0.5480306	2.9213001	0.6329203	0.8555544	0.5051313	0.4713615	U	0.4686274	0.8518227
13773	129	183814	183815	1	  73	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.449517	3.076755	1.0360340	2210	Uncharacterized conserved protein	S	conserved hypothetical protein	1.334512	3.035578	1.0775568	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved within P. aerophilum	 0.000000e+00	 0	1.322617e-02	 2.192903e-04	 5.798558e-02	-6.590847e-02	8.752227e-01		 1	 0	 TRUE	 TRUE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5023184	0.4483858	U	0.4686274	0.6162291
13773	129	183815	183816	1	  51	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.334512	3.035578	1.0775568	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved within P. aerophilum	1.398411	3.000759	1.0551062	-	-	-	hypothetical protein	 0.000000e+00	 0	4.083145e-03	 6.192578e-03	 6.557880e-02	 3.750192e-01	1.781708e-01		 0	 0	FALSE	 TRUE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6232673	0.5854446	U	0.4686274	0.6162291
13773	129	183816	183817	1	  53	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.398411	3.000759	1.0551062	-	-	-	hypothetical protein	1.380715	2.891643	1.0291224	2046	ATP sulfurylase (sulfate adenylyltransferase)	P	sulfate adenylyltransferase	 0.000000e+00	 0	3.131393e-04	 3.744621e-03	 7.007791e-02	 2.520236e-01	1.972483e-02		 0	19	 TRUE	 TRUE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5701348	0.6377141	U	0.4686274	0.6162291
13773	129	183817	183818	1	  -3	Same	+	+	 2.197225	0	  2.197225	  2.19722458	1.380715	2.891643	1.0291224	2046	ATP sulfurylase (sulfate adenylyltransferase)	P	sulfate adenylyltransferase	1.301676	2.716322	0.9750762	-	-	-	conserved hypothetical protein	 1.864363e-02	 1	6.247171e-03	 1.058160e-02	 1.886983e-01	 5.452392e-01	1.351395e-01		19	 1	 TRUE	 TRUE	120	 TRUE	2.9321590	1.6745314	0.5480306	2.9469979	0.6329203	0.6679717	0.6957759	0.5970160	U	0.4686274	0.8419484
13773	129	183818	183819	1	 331	Same	+	+	 0.000000	0	  0.000000	 -0.11778304	1.301676	2.716322	0.9750762	-	-	-	conserved hypothetical protein	1.307993	3.235518	1.1247951	2181	Nitrate reductase gamma subunit	C	nitrate reductase gamma subunit (narI)	 3.279005e-02	 1	3.990459e-05	 2.146929e-02	 2.670605e-01	 8.765880e-01	2.850733e-04		 1	 7	 TRUE	 TRUE	121	 TRUE	0.4469764	0.2945188	0.5480306	0.4469764	0.6329203	0.7581838	0.8003462	0.6540676	U	0.4686274	0.5554237
13773	129	183819	183820	1	 336	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.307993	3.235518	1.1247951	2181	Nitrate reductase gamma subunit	C	nitrate reductase gamma subunit (narI)	1.479378	3.187912	1.0657804	-	-	-	paREP13	 0.000000e+00	 0	2.937259e-02	-4.013006e-03	-7.641572e-02	-3.346843e-01	1.660399e+00		 7	 0	 TRUE	 TRUE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4310306	0.4130911	U	0.4686274	0.6162291
13773	129	183820	183821	1	  19	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.479378	3.187912	1.0657804	-	-	-	paREP13	1.303265	2.748000	0.9696739	247	Fe-S oxidoreductase	C	iron-sulfur binding reductase, degenerate	 0.000000e+00	 0	3.101581e-02	-4.145338e-03	 2.600230e-02	-3.385599e-01	1.688205e+00		 0	 0	 TRUE	 TRUE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4304348	0.4124111	U	0.4686274	0.6162291
13773	129	183821	183822	1	 285	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.303265	2.748000	0.9696739	247	Fe-S oxidoreductase	C	iron-sulfur binding reductase, degenerate	1.398553	3.060306	1.0839476	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	flavoprotein reductase, conjectural	 0.000000e+00	 0	9.079941e-03	 7.827032e-03	 6.362202e-02	 4.069922e-01	2.550134e-01		 0	13	 TRUE	 TRUE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6372481	0.5607931	U	0.4686274	0.6162291
13773	129	183822	183823	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.36974703	1.398553	3.060306	1.0839476	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	flavoprotein reductase, conjectural	1.310305	3.031383	1.0613498	2427	Uncharacterized conserved protein	S	conserved hypothetical protein	 2.528213e-02	 3	7.787702e-03	 7.455001e-03	 1.513640e-01	 3.996710e-01	2.382459e-01		13	 3	 TRUE	 TRUE	125	 TRUE	0.4469764	0.2466800	0.5480306	0.4469764	0.7136133	0.7123155	0.6351113	0.5674779	U	0.4686274	0.5403265
13773	129	183823	183824	1	  13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.310305	3.031383	1.0613498	2427	Uncharacterized conserved protein	S	conserved hypothetical protein	1.349850	2.971776	1.0119181	-	-	-	hypothetical protein	 0.000000e+00	 0	1.563818e-03	 1.432636e-02	 1.638794e-01	 7.165782e-01	2.081742e-02		 3	 0	 TRUE	 TRUE	126	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7594547	0.6371410	U	0.4686274	0.6162291
13773	129	183824	183825	1	  83	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.349850	2.971776	1.0119181	-	-	-	hypothetical protein	1.397392	3.022192	1.0733848	1249	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and re	C	mercuric reductase	 0.000000e+00	 0	2.260163e-03	 5.483410e-03	 6.607229e-02	 3.490410e-01	1.078944e-01		 0	23	FALSE	 TRUE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6122901	0.6036927	U	0.4686274	0.6162291
13773	129	183825	183826	1	 156	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.397392	3.022192	1.0733848	1249	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and re	C	mercuric reductase	1.380578	2.937157	1.0084863	-	-	-	hypothetical protein	 0.000000e+00	 0	2.826946e-04	 3.824080e-03	 7.077931e-02	 2.594550e-01	1.662378e-02		23	 0	 TRUE	 TRUE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5735786	0.6393728	U	0.4686274	0.6162291
13773	129	183826	183827	1	 -15	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.380578	2.937157	1.0084863	-	-	-	hypothetical protein	1.537154	3.268051	1.1052041	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	flavoprotein reductase, conjectural	 0.000000e+00	 0	2.451589e-02	-6.073127e-03	-4.432808e-02	-4.062577e-01	1.640680e+00		 0	 0	 TRUE	 TRUE	127	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4182494	0.4136182	U	0.4686274	0.6162291
13773	129	183827	183828	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.537154	3.268051	1.1052041	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	flavoprotein reductase, conjectural	1.453675	3.581518	1.2099148	428	Predicted divalent heavy-metal cations transporter	P	conserved hypothetical protein	 0.000000e+00	 0	6.968667e-03	 1.957274e-04	 4.361550e-03	 8.308591e-02	3.419961e-01		 0	 0	FALSE	 TRUE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177017	0.5271430	U	0.4686274	0.6162291
13773	129	183828	183829	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.453675	3.581518	1.2099148	428	Predicted divalent heavy-metal cations transporter	P	conserved hypothetical protein	1.490092	3.297159	1.1063942	-	-	-	hypothetical protein	 0.000000e+00	 0	1.326210e-03	 8.832167e-05	 2.556043e-02	 5.251828e-02	1.063871e-01		 0	 0	FALSE	 TRUE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187770	0.6042634	U	0.4686274	0.6162291
13773	129	183829	183830	1	   2	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.490092	3.297159	1.1063942	-	-	-	hypothetical protein	1.602453	3.566372	1.1186938	-	-	-	hypothetical protein	 0.000000e+00	 0	1.262490e-02	 5.845933e-03	 1.432361e-01	 3.860434e-01	1.801198e-01		 0	 0	FALSE	 TRUE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6285212	0.5850474	U	0.4686274	0.6162291
13773	129	183830	183831	1	  95	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.602453	3.566372	1.1186938	-	-	-	hypothetical protein	1.398054	3.116759	1.0614079	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	 0.000000e+00	 0	4.177901e-02	-8.057411e-03	-1.241961e-01	-3.820430e-01	1.712221e+00		 0	 2	FALSE	 TRUE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4225799	0.4121339	U	0.4686274	0.6162291
13773	129	183831	183832	1	   8	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.398054	3.116759	1.0614079	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	1.459155	3.135018	1.0711881	2210	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.733331e-03	-4.140105e-04	 8.824894e-03	-7.559861e-02	3.741345e-01		 2	 0	 TRUE	 TRUE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4994825	0.5178169	U	0.4686274	0.6162291
13773	129	183832	183833	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.459155	3.135018	1.0711881	2210	Uncharacterized conserved protein	S	conserved hypothetical protein	1.477701	3.411742	1.1696672	2391	Predicted transporter component	R	conserved hypothetical protein	 0.000000e+00	 0	3.439683e-04	 2.042006e-04	 2.472992e-02	 5.950257e-02	3.035029e-02		 0	 5	 TRUE	 TRUE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185720	0.6329638	U	0.4686274	0.6162291
13773	129	183833	183834	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.477701	3.411742	1.1696672	2391	Predicted transporter component	R	conserved hypothetical protein	1.495703	3.418832	1.1444442	-	-	-	hypothetical protein	 0.000000e+00	 0	3.240666e-04	 1.165720e-03	 3.759599e-02	 1.652259e-01	1.722279e-02		 5	 0	 TRUE	 TRUE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5365036	0.6392215	U	0.4686274	0.6162291
13773	129	183834	183835	1	 -24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.495703	3.418832	1.1444442	-	-	-	hypothetical protein	1.487235	3.345249	1.0901355	1999	Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic sys	R	senC homolog	 0.000000e+00	 0	7.169743e-05	 1.588191e-03	 3.758373e-02	 2.040595e-01	2.488501e-03		 0	 4	 TRUE	 TRUE	127	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5509555	0.6493745	U	0.4686274	0.6162291
13773	129	183835	183836	1	 105	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.487235	3.345249	1.0901355	1999	Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic sys	R	senC homolog	1.320835	3.043376	1.0151908	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.768904e-02	-4.679530e-03	 6.047472e-03	-3.825295e-01	1.748565e+00		 4	 0	 TRUE	 TRUE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4220571	0.4115066	U	0.4686274	0.6162291
13773	129	183836	183837	1	   5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.320835	3.043376	1.0151908	-	-	-	conserved within P. aerophilum	1.427720	3.369964	1.1397821	-	-	-	hypothetical protein	 0.000000e+00	 0	1.142429e-02	 3.090707e-03	 1.501163e-02	 1.270520e-01	5.668252e-01		 0	 0	 TRUE	 TRUE	129	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5234101	0.4816610	U	0.4686274	0.6162291
13773	129	183837	183838	1	  96	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.427720	3.369964	1.1397821	-	-	-	hypothetical protein	1.476887	3.261063	1.0826206	320	Lipoate synthase	H	lipoic acid synthetase	 0.000000e+00	 0	2.417461e-03	-6.035359e-04	 1.390841e-02	-4.750829e-02	2.271404e-01		 0	41	FALSE	 TRUE	128	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5070499	0.5719932	U	0.4686274	0.6162291
13773	129	183838	183839	1	  31	Same	+	+	 2.564949	0	  2.564949	 -2.05085474	1.476887	3.261063	1.0826206	320	Lipoate synthase	H	lipoic acid synthetase	1.289608	2.768884	0.9640038	1071	Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha	C	pyruvate dehydrogenase E1 alpha subunit	 5.538024e-02	36	3.507348e-02	-4.124627e-03	 3.733055e-02	-3.227996e-01	1.688205e+00	0	41	36	 TRUE	 TRUE	129	 TRUE	2.9291542	0.1953189	0.5480306	2.9443141	0.7743490	0.8711003	0.4347457	0.4124111	N	0.5492530	0.4560792
13773	129	183839	183840	1	   0	Same	+	+	46.674626	0	 65.719232	 64.19133555	1.289608	2.768884	0.9640038	1071	Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha	C	pyruvate dehydrogenase E1 alpha subunit	1.339069	2.895078	1.0262107	22	Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta s	C	pyruvate dehydrogenase E1 beta subunit	 3.322889e-01	36	2.446347e-03	 1.817230e-02	 1.987837e-01	 8.069989e-01	1.642646e-02	C	36	44	 TRUE	 TRUE	130	 TRUE	2.0771956	2.0522099	0.5480306	2.1411556	0.7743490	1.2424137	0.7884734	0.6394805	Y	1.4497162	0.9364693
13773	129	183840	183841	1	   0	Same	+	+	29.777454	0	 62.916683	 59.61121641	1.339069	2.895078	1.0262107	22	Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta s	C	pyruvate dehydrogenase E1 beta subunit	1.354144	2.903410	1.0237930	508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and	C	pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)	 2.408013e-01	42	2.272677e-04	 1.092336e-02	 1.404334e-01	 6.298058e-01	6.997843e-03	C	44	42	 TRUE	 TRUE	131	 TRUE	2.1617868	2.0500148	0.5480306	2.1495760	0.7729307	1.1807211	0.7289167	0.6444474	Y	1.4497162	0.9356744
13773	129	183841	183842	1	  -3	Same	+	+	25.935485	0	 61.245552	 55.72385375	1.354144	2.903410	1.0237930	508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and	C	pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)	1.381975	3.075030	1.0645321	1249	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and re	C	pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase)	 1.052926e-01	42	7.745720e-04	 6.750758e-03	 8.788991e-02	 4.287302e-01	3.364395e-02	C	42	54	 TRUE	 TRUE	132	 TRUE	2.2102051	2.0434403	0.5480306	2.1579474	0.7729307	1.0259018	0.6469509	0.6306472	Y	1.4497162	0.9348035
13773	129	183842	183843	1	  -3	Same	+	+	 1.504077	0	  1.504077	 -2.06751619	1.381975	3.075030	1.0645321	1249	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and re	C	pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase)	1.442675	3.097238	1.0061463	321	Lipoate-protein ligase B	H	lipoate protein ligase B	 3.118390e-02	20	3.684391e-03	 6.052037e-04	 1.576957e-02	-9.177711e-03	3.428943e-01	0	54	20	 TRUE	 TRUE	133	 TRUE	2.9322497	0.1947742	0.5480306	2.9467151	0.7777535	0.7398911	0.5188017	0.5266146	N	0.5492530	0.4558118
13773	129	183843	183844	1	  61	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.442675	3.097238	1.0061463	321	Lipoate-protein ligase B	H	lipoate protein ligase B	1.483919	3.192871	1.0732777	-	-	-	hypothetical protein	 0.000000e+00	 0	1.701129e-03	-2.835757e-04	 1.991574e-02	 6.431819e-03	1.466602e-01		20	 0	 TRUE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5193493	0.5938717	U	0.4686274	0.6162291
13773	129	183844	183845	1	 261	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.483919	3.192871	1.0732777	-	-	-	hypothetical protein	1.517879	3.448035	1.1079735	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.153273e-03	 2.162562e-03	 5.456197e-02	 2.425715e-01	4.357616e-02		 0	 0	 TRUE	 TRUE	135	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5664255	0.6264906	U	0.4686274	0.6162291
13773	129	183845	183846	1	  21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.517879	3.448035	1.1079735	-	-	-	conserved within P. aerophilum	1.403009	3.076164	1.0441541	1741	Pirin-related protein	R	pirin homolog	 0.000000e+00	 0	1.319512e-02	-3.216854e-03	-2.215544e-02	-2.346412e-01	9.877583e-01		 0	20	 TRUE	 TRUE	136	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4553659	0.4404584	U	0.4686274	0.6162291
13773	129	183846	183847	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.403009	3.076164	1.0441541	1741	Pirin-related protein	R	pirin homolog	1.399126	3.017080	1.0176185	-	-	-	hypothetical protein	 0.000000e+00	 0	1.507833e-05	 2.528862e-03	 5.129838e-02	 1.659079e-01	1.913643e-03		20	 0	 TRUE	 TRUE	137	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5370614	0.6504429	U	0.4686274	0.6162291
13773	129	183847	183848	1	 121	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.399126	3.017080	1.0176185	-	-	-	hypothetical protein	1.432578	3.065229	0.9804827	-	-	-	formate dehydrogenase protein fdhE	 0.000000e+00	 0	1.119056e-03	 9.833739e-04	 2.619705e-02	 3.463287e-02	1.219366e-01		 0	 0	 TRUE	 TRUE	138	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175633	0.6003415	U	0.4686274	0.6162291
13773	129	183848	183849	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.432578	3.065229	0.9804827	-	-	-	formate dehydrogenase protein fdhE	1.443545	3.453513	1.1392855	-	-	-	hypothetical protein	 0.000000e+00	 0	1.202615e-04	 1.476586e-04	 2.172162e-02	-1.731644e-03	1.041872e-02		 0	 0	FALSE	 TRUE	137	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199710	0.6425621	U	0.4686274	0.6162291
13773	129	183849	183850	1	  37	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.443545	3.453513	1.1392855	-	-	-	hypothetical protein	1.506129	3.161920	1.0715123	437	Fe-S-cluster-containing hydrogenase components 1	C	formate dehydrogenase beta subunit	 0.000000e+00	 0	3.916806e-03	-4.295771e-04	 2.316706e-02	 1.164324e-02	2.707513e-01		 0	 4	FALSE	 TRUE	136	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187046	0.5531837	U	0.4686274	0.6162291
13773	129	183850	183851	1	   6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.506129	3.161920	1.0715123	437	Fe-S-cluster-containing hydrogenase components 1	C	formate dehydrogenase beta subunit	1.441328	3.147806	1.1188679	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	formate dehydrogenase alpha subunit	 7.562104e-04	 1	4.199137e-03	-5.508923e-04	 6.945222e-03	 0.000000e+00	2.935760e-01	C	 4	 1	FALSE	 TRUE	135	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.5199566	0.5445363	Y	1.4497162	0.7118045
13773	129	183851	183852	1	 210	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.441328	3.147806	1.1188679	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	formate dehydrogenase alpha subunit	1.483396	3.270195	1.0982228	1526	Uncharacterized protein required for formate dehydrogenase activity	C	formate dehydrogenase delta subunit	 2.630347e-03	 1	1.769684e-03	-3.220950e-04	 1.931539e-02	 0.000000e+00	1.550051e-01	C	 1	13	FALSE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5063263	0.5199566	0.5915122	Y	1.4497162	0.7118045
13773	129	183852	183853	1	 -21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.483396	3.270195	1.0982228	1526	Uncharacterized protein required for formate dehydrogenase activity	C	formate dehydrogenase delta subunit	1.590437	3.597336	1.1258192	-	-	-	hypothetical protein	 0.000000e+00	 0	1.145785e-02	 4.449859e-03	 1.192630e-01	 3.347868e-01	2.085187e-01		13	 0	FALSE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6067323	0.5767479	U	0.4686274	0.6162291
13773	129	183853	183854	1	 139	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.590437	3.597336	1.1258192	-	-	-	hypothetical protein	1.413890	3.026527	1.0050593	1832	Predicted CoA-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	3.116894e-02	-5.214553e-03	-8.575789e-02	-2.310225e-01	1.258943e+00		 0	22	FALSE	 TRUE	132	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4566187	0.4258352	U	0.4686274	0.6162291
13773	129	183854	183855	1	  29	Same	+	+	 2.662588	0	  2.662588	  2.60339896	1.413890	3.026527	1.0050593	1832	Predicted CoA-binding protein	R	conserved hypothetical protein	1.464235	3.206119	1.1072739	1975	Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	O	conserved hypothetical protein	 3.368335e-02	 2	2.534576e-03	-4.816033e-04	 1.195373e-02	-5.775561e-02	2.345146e-01		22	 2	 TRUE	 TRUE	133	 TRUE	2.9244472	1.6981571	0.5480306	2.9399224	0.6838149	0.7648592	0.5045433	0.5687032	U	0.4686274	0.8460376
13773	129	183855	183856	1	  19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.464235	3.206119	1.1072739	1975	Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	O	conserved hypothetical protein	1.445955	3.011945	0.9961085	-	-	-	paREP8	 0.000000e+00	 0	3.341551e-04	-6.983505e-05	 1.957746e-02	 8.647027e-03	2.955338e-02		 2	 0	 TRUE	 TRUE	134	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190270	0.6332836	U	0.4686274	0.6162291
13773	129	183856	183857	1	 130	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.445955	3.011945	0.9961085	-	-	-	paREP8	1.414134	3.111511	1.0859890	2102	Predicted ATPases of PP-loop superfamily	R	conserved hypothetical protein	 0.000000e+00	 0	1.012583e-03	 2.026194e-04	 2.655714e-02	-1.098828e-02	9.660981e-02		 0	13	FALSE	 TRUE	133	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182468	0.6082362	U	0.4686274	0.6162291
13773	129	183857	183858	1	  21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.414134	3.111511	1.0859890	2102	Predicted ATPases of PP-loop superfamily	R	conserved hypothetical protein	1.348139	2.970023	1.0134507	-	-	-	paREP8	 0.000000e+00	 0	4.355233e-03	 3.847141e-03	 8.926845e-02	 2.133385e-01	2.699532e-01		13	 0	 TRUE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5546694	0.5534105	U	0.4686274	0.6162291
13773	129	183858	183859	1	 438	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.348139	2.970023	1.0134507	-	-	-	paREP8	1.451656	3.109448	1.0212581	2402	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 0.000000e+00	 0	1.071567e-02	-2.716799e-05	-6.654170e-03	-7.757763e-02	7.884568e-01		 0	 1	 TRUE	 TRUE	135	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4987732	0.4570748	U	0.4686274	0.6162291
13773	129	183859	183860	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.451656	3.109448	1.0212581	2402	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.416084	3.260653	1.0759889	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.265374e-03	-9.290481e-06	 2.379495e-02	-2.480373e-02	1.230109e-01		 1	 0	FALSE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5138646	0.6000329	U	0.4686274	0.6162291
13773	129	183860	183861	1	  80	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.416084	3.260653	1.0759889	-	-	-	conserved within P. aerophilum	1.473136	3.409491	1.1039291	1846	Transcriptional regulators	K	transcriptional regulator, conjectural	 0.000000e+00	 0	3.254911e-03	-7.677178e-04	 9.795810e-03	-7.441120e-02	2.994265e-01		 0	 3	FALSE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4999172	0.5419791	U	0.4686274	0.6162291
13773	129	183861	183862	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.473136	3.409491	1.1039291	1846	Transcriptional regulators	K	transcriptional regulator, conjectural	1.377090	2.929115	0.9892420	3945	Uncharacterized conserved protein	S	conserved hypothetical protein	 5.631536e-04	 1	9.224712e-03	-1.615549e-03	 1.466797e-02	-1.798082e-01	8.187264e-01		 3	 1	FALSE	 TRUE	132	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.4706373	0.4531269	U	0.4686274	0.6162291
13773	129	183862	183863	1	 213	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.377090	2.929115	0.9892420	3945	Uncharacterized conserved protein	S	conserved hypothetical protein	1.623073	3.881899	1.1556832	-	-	-	hypothetical protein	 0.000000e+00	 0	6.050731e-02	-1.275624e-02	-6.758276e-02	-5.497261e-01	2.283508e+00		 1	 0	FALSE	 TRUE	131	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3986804	0.4052564	U	0.4686274	0.6162291
13773	129	183863	183864	1	 442	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.623073	3.881899	1.1556832	-	-	-	hypothetical protein	1.381527	3.321544	1.0910805	1846	Transcriptional regulators	K	transcriptional regulator, conjectural	 0.000000e+00	 0	5.834448e-02	-1.199462e-02	-1.819601e-01	-5.151522e-01	2.169008e+00		 0	 0	FALSE	 TRUE	130	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4037046	0.4063867	U	0.4686274	0.6162291
13773	129	183864	183865	1	  56	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.381527	3.321544	1.0910805	1846	Transcriptional regulators	K	transcriptional regulator, conjectural	1.398184	3.038462	1.0660191	2514	Predicted ring-cleavage extradiol dioxygenase	R	conserved hypothetical protein	 0.000000e+00	 0	2.774742e-04	 3.717485e-03	 5.899725e-02	 2.501165e-01	1.803795e-02		 0	14	FALSE	 TRUE	129	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5692958	0.6386975	U	0.4686274	0.6162291
13773	129	183865	183866	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.398184	3.038462	1.0660191	2514	Predicted ring-cleavage extradiol dioxygenase	R	conserved hypothetical protein	1.297921	2.819524	0.9876389	3193	Uncharacterized protein, possibly involved in utilization of glycolate and propanediol	R	glcG homolog	 5.755097e-03	 2	1.005271e-02	 8.166027e-03	 1.688420e-01	 4.152941e-01	2.620371e-01		14	 2	FALSE	 TRUE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5508290	0.6415810	0.5566624	U	0.4686274	0.6162291
13773	129	183866	183867	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.05918887	1.297921	2.819524	0.9876389	3193	Uncharacterized protein, possibly involved in utilization of glycolate and propanediol	R	glcG homolog	1.326952	2.937303	1.0116287	604	NADPH:quinone reductase and related Zn-dependent oxidoreductases	CR	alcohol dehydrogenase (Zinc)	 1.023438e-02	 2	8.428146e-04	 1.909812e-02	 2.235491e-01	 8.342311e-01	4.985249e-03		 2	26	FALSE	 TRUE	127	 TRUE	0.4469764	0.3056289	0.5480306	0.4469764	0.6838149	0.6004284	0.7913054	0.6463622	U	0.4686274	0.5589164
13773	129	183867	183868	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -1.90077538	1.326952	2.937303	1.0116287	604	NADPH:quinone reductase and related Zn-dependent oxidoreductases	CR	alcohol dehydrogenase (Zinc)	1.250110	2.608395	0.9014901	179	2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	Q	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, conjectural	 2.138653e-02	18	5.904772e-03	 2.504778e-02	 3.771658e-01	 8.686254e-01	1.204435e-02		26	18	FALSE	 TRUE	126	 TRUE	0.4469764	0.1969447	0.5480306	0.4469764	0.7781393	0.6861429	0.7989115	0.6419986	U	0.4686274	0.5245524
13773	129	183868	183869	1	  68	Same	-	-	 0.000000	0	  0.000000	 -0.61097853	1.250110	2.608395	0.9014901	179	2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	Q	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, conjectural	1.479139	3.302477	1.1236431	2133	Glucose/sorbosone dehydrogenases	G	conserved hypothetical protein	 6.387034e-03	11	5.245453e-02	-5.584896e-03	-1.454953e-01	-3.535192e-01	1.812051e+00	0	18	11	FALSE	 TRUE	125	 TRUE	0.4469764	0.2305110	0.5480306	0.4469764	0.7764261	0.5625579	0.4274197	0.4106571	N	0.5492530	0.5439964
13773	129	183869	183870	1	 101	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.479139	3.302477	1.1236431	2133	Glucose/sorbosone dehydrogenases	G	conserved hypothetical protein	1.439133	3.074786	1.0542712	479	Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit	C	iron-sulfur protein, putative	 0.000000e+00	 0	1.600535e-03	-3.401778e-04	 1.518687e-02	-7.410728e-03	1.431545e-01	0	11	 0	FALSE	 TRUE	124	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5193297	0.5946095	N	0.5492530	0.6245624
13773	129	183870	183871	1	 -25	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.439133	3.074786	1.0542712	479	Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit	C	iron-sulfur protein, putative	1.619914	3.522053	1.1136763	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	3.268204e-02	-2.066111e-03	 6.831922e-02	-1.855862e-02	8.396916e-01		 0	 1	 TRUE	 TRUE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5158384	0.4516044	U	0.4686274	0.6162291
13773	129	183871	183872	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.619914	3.522053	1.1136763	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.321550	2.820879	0.9997251	2368	Aromatic ring hydroxylase	Q	4-hydroxyphenylacetate-3-hydroxylase, conjectural	 2.915931e-02	 1	8.902125e-02	-2.188130e-02	-2.644115e-01	-7.993956e-01	3.197592e+00		 1	 9	FALSE	 TRUE	124	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.7296993	0.3832011	0.4005695	U	0.4686274	0.5573725
13773	129	183872	183873	1	 285	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.321550	2.820879	0.9997251	2368	Aromatic ring hydroxylase	Q	4-hydroxyphenylacetate-3-hydroxylase, conjectural	1.643065	3.602775	1.0795956	2210	Uncharacterized conserved protein	S	conserved within P. aerophilum	 0.000000e+00	 0	1.033722e-01	-2.488731e-02	-2.197681e-01	-8.261106e-01	3.305531e+00		 9	 0	FALSE	 TRUE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3810518	0.3998860	U	0.4686274	0.6162291
13773	129	183873	183874	1	 332	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.643065	3.602775	1.0795956	2210	Uncharacterized conserved protein	S	conserved within P. aerophilum	1.479648	3.191031	1.0872750	3546	Mn-containing catalase	P	pseudocatalase	 0.000000e+00	 0	2.670518e-02	 5.415794e-03	-7.209362e-03	 3.345641e-01	3.181895e-01		 0	 6	FALSE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6063311	0.5356423	U	0.4686274	0.6162291
13773	129	183874	183875	1	   4	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.479648	3.191031	1.0872750	3546	Mn-containing catalase	P	pseudocatalase	1.540802	3.669063	1.1103851	3639	ABC-type phosphate/phosphonate transport system, permease component	P	transport protein, putative	 0.000000e+00	 0	3.739761e-03	 2.526291e-03	 6.854909e-02	 2.596617e-01	1.273553e-01	P	 6	 0	 TRUE	 TRUE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5737986	0.5986351	Y	1.4497162	0.7118045
13773	129	183875	183876	1	  -6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.540802	3.669063	1.1103851	3639	ABC-type phosphate/phosphonate transport system, permease component	P	transport protein, putative	1.513705	3.394640	1.1074322	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	iron (III) ABC transporter ATP-binding protein, putative	 0.000000e+00	 0	7.342208e-04	 5.571300e-03	 7.543866e-02	 4.200897e-01	1.783239e-02	0	 0	 4	FALSE	 TRUE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6440930	0.6388731	N	0.5492530	0.6245624
13773	129	183876	183877	1	 137	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.513705	3.394640	1.1074322	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	iron (III) ABC transporter ATP-binding protein, putative	1.485342	3.226206	1.0895051	3221	ABC-type phosphate/phosphonate transport system, periplasmic component	P	hypothetical protein	 1.523153e-03	 2	8.045030e-04	 2.115432e-03	 3.853821e-02	 2.396665e-01	3.061829e-02	0	 4	 2	FALSE	 TRUE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4836464	0.5642404	0.6326945	N	0.5492530	0.6245624
13773	129	183877	183878	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.485342	3.226206	1.0895051	3221	ABC-type phosphate/phosphonate transport system, periplasmic component	P	hypothetical protein	1.435424	2.939284	0.9740132	2406	Protein distantly related to bacterial ferritins	R	conserved hypothetical protein	 1.523153e-03	 2	2.491813e-03	-5.421382e-04	 1.211965e-02	-2.327470e-02	2.177300e-01		 2	 4	 TRUE	 TRUE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4836464	0.5142676	0.5751052	U	0.4686274	0.6162291
13773	129	183878	183879	1	  58	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.435424	2.939284	0.9740132	2406	Protein distantly related to bacterial ferritins	R	conserved hypothetical protein	1.421209	2.966910	1.0204997	1433	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	2.020455e-04	 4.820110e-04	 2.803949e-02	 1.185528e-02	2.309094e-02		 4	 0	 TRUE	 TRUE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186829	0.6362005	U	0.4686274	0.6162291
13773	129	183879	183880	1	 160	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.421209	2.966910	1.0204997	1433	Uncharacterized conserved protein	S	hypothetical protein	1.465046	3.201706	1.1214751	665	Glycine/D-amino acid oxidases (deaminating)	E	conserved hypothetical protein	 0.000000e+00	 0	1.921687e-03	-4.121106e-04	 1.407897e-02	-4.613947e-02	1.847086e-01		 0	 2	 TRUE	 TRUE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5074646	0.5840258	U	0.4686274	0.6162291
13773	129	183880	183881	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.465046	3.201706	1.1214751	665	Glycine/D-amino acid oxidases (deaminating)	E	conserved hypothetical protein	1.661344	3.590164	1.1386743	-	-	-	hypothetical protein	 0.000000e+00	 0	3.853276e-02	 2.866561e-03	 1.657211e-01	 2.079669e-01	5.182232e-01		 2	 0	 TRUE	 TRUE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5529587	0.4901366	U	0.4686274	0.6162291
13773	129	183881	183882	1	 -45	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.661344	3.590164	1.1386743	-	-	-	hypothetical protein	1.270285	2.773619	0.9741628	1145	Ferredoxin	C	ferredoxin oxidoreductase, conjectural	 0.000000e+00	 0	1.529270e-01	-3.802376e-02	-4.524910e-01	-9.206866e-01	3.684161e+00		 0	 0	FALSE	 TRUE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3781748	0.3990644	U	0.4686274	0.6162291
13773	129	183882	183883	1	  66	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.270285	2.773619	0.9741628	1145	Ferredoxin	C	ferredoxin oxidoreductase, conjectural	1.375516	2.978272	1.0475524	-	-	-	hypothetical protein	 0.000000e+00	 0	1.107348e-02	 1.374192e-02	 1.127370e-01	 6.142917e-01	1.230109e-01		 0	 0	FALSE	 TRUE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7247155	0.6000329	U	0.4686274	0.6162291
13773	129	183883	183884	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.375516	2.978272	1.0475524	-	-	-	hypothetical protein	1.354007	2.947917	1.0735409	-	-	-	hypothetical protein	 0.000000e+00	 0	4.626433e-04	 7.389380e-03	 1.166005e-01	 4.731251e-01	1.584159e-02		 0	 0	FALSE	 TRUE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6638072	0.6399079	U	0.4686274	0.6162291
13773	129	183884	183885	1	 -33	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.354007	2.947917	1.0735409	-	-	-	hypothetical protein	1.316075	2.767352	0.9644184	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	 0.000000e+00	 0	1.438823e-03	 1.317811e-02	 1.972358e-01	 6.813464e-01	2.262681e-02		 0	 2	FALSE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7470102	0.6365095	U	0.4686274	0.6162291
13773	129	183885	183886	1	  55	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.316075	2.767352	0.9644184	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein	1.438138	3.127943	1.0454736	2210	Uncharacterized conserved protein	S	conserved hypothetical protein	 4.414517e-03	 2	1.489941e-02	 1.793625e-03	-4.345440e-03	 3.261026e-02	7.534187e-01		 2	11	FALSE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5396105	0.5174574	0.4592446	U	0.4686274	0.6162291
13773	129	183886	183887	1	  -6	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.438138	3.127943	1.0454736	2210	Uncharacterized conserved protein	S	conserved hypothetical protein	1.385421	2.990659	1.0217760	2154	Pterin-4a-carbinolamine dehydratase	H	4a-hydroxytetrahydrobiopterin dehydratase	 0.000000e+00	 0	2.779069e-03	 8.744483e-04	 4.156845e-02	 1.976547e-02	2.620371e-01		11	 0	FALSE	 TRUE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176791	0.5566624	U	0.4686274	0.6162291
13773	129	183887	183888	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.385421	2.990659	1.0217760	2154	Pterin-4a-carbinolamine dehydratase	H	4a-hydroxytetrahydrobiopterin dehydratase	1.418793	3.352008	1.1516514	1230	Co/Zn/Cd efflux system component	P	cation efflux system protein	 0.000000e+00	 0	1.113718e-03	 2.150636e-03	 3.752968e-02	 1.261626e-01	1.009513e-01	0	 0	34	 TRUE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5233039	0.6063831	N	0.5492530	0.6245624
13773	129	183888	183889	1	  68	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.418793	3.352008	1.1516514	1230	Co/Zn/Cd efflux system component	P	cation efflux system protein	1.481716	3.398539	1.1200883	-	-	-	paREP1	 0.000000e+00	 0	3.959233e-03	-9.885129e-04	 8.815992e-03	-8.711227e-02	3.703885e-01		34	 0	 TRUE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4961454	0.5182644	U	0.4686274	0.6162291
13773	129	183889	183890	1	  11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.481716	3.398539	1.1200883	-	-	-	paREP1	1.327360	2.871127	1.0096848	1331	Highly conserved protein containing a thioredoxin domain	O	conserved hypothetical protein	 0.000000e+00	 0	2.382579e-02	-3.761063e-03	 1.349549e-02	-3.316074e-01	1.574515e+00		 0	24	 TRUE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4322147	0.4149848	U	0.4686274	0.6162291
13773	129	183890	183891	1	 162	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.327360	2.871127	1.0096848	1331	Highly conserved protein containing a thioredoxin domain	O	conserved hypothetical protein	1.392398	3.105082	1.0365829	-	-	-	paREP1	 0.000000e+00	 0	4.230018e-03	 7.317246e-03	 7.606308e-02	 4.217400e-01	1.562160e-01		24	 0	FALSE	 TRUE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6450419	0.5909581	U	0.4686274	0.6162291
13773	129	183891	183892	1	 713	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.392398	3.105082	1.0365829	-	-	-	paREP1	1.433795	3.663050	1.2061398	-	-	-	P. aerophilum family 79 protein	 0.000000e+00	 0	1.713634e-03	 1.038201e-03	 2.482477e-02	 3.286765e-02	1.704809e-01		 0	 0	 TRUE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174768	0.5875676	U	0.4686274	0.6162291
13773	129	183892	183893	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.433795	3.663050	1.2061398	-	-	-	P. aerophilum family 79 protein	1.718508	3.850957	1.1506004	-	-	-	P. aerophilum family 66 protein, interruption-C	 0.000000e+00	 0	8.106200e-02	-4.700783e-03	 1.461842e-01	-6.662646e-02	1.089404e+00		 0	 0	FALSE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5019180	0.4337863	U	0.4686274	0.6162291
13773	129	183893	183894	1	 594	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.718508	3.850957	1.1506004	-	-	-	P. aerophilum family 66 protein, interruption-C	1.427510	3.013995	0.9934479	-	-	-	P. aerophilum family 66 protein, interruption-N	 0.000000e+00	 0	8.467999e-02	-6.379438e-03	-2.335998e-01	-1.414876e-01	1.255500e+00		 0	 0	FALSE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4792844	0.4259424	U	0.4686274	0.6162291
13773	129	183894	183895	1	 419	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.427510	3.013995	0.9934479	-	-	-	P. aerophilum family 66 protein, interruption-N	1.388152	3.014273	1.0294393	4741	Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase	F	conserved hypothetical protein	 0.000000e+00	 0	1.549098e-03	 1.510372e-03	 4.710555e-02	 7.469568e-02	1.368375e-01		 0	 0	FALSE	 TRUE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178886	0.5965788	U	0.4686274	0.6162291
13773	129	183895	183896	1	 339	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.388152	3.014273	1.0294393	4741	Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase	F	conserved hypothetical protein	1.411779	3.020746	1.0602383	-	-	-	selenium binding protein, probable	 0.000000e+00	 0	5.582439e-04	 2.505245e-03	 4.385825e-02	 1.525531e-01	4.784107e-02		 0	 3	 TRUE	 TRUE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5311992	0.6247981	U	0.4686274	0.6162291
13773	129	183896	183897	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.411779	3.020746	1.0602383	-	-	-	selenium binding protein, probable	1.412858	3.487151	1.1382069	-	-	-	hypothetical protein	 0.000000e+00	 0	1.164975e-06	 1.526519e-03	 3.837197e-02	 8.548429e-02	5.889944e-05		 3	 0	 TRUE	 TRUE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176836	0.6554240	U	0.4686274	0.6162291
13773	129	183897	183898	1	  39	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.412858	3.487151	1.1382069	-	-	-	hypothetical protein	1.369248	3.026826	1.0187989	1225	Peroxiredoxin	O	bacterioferritin comigratory protein homolog	 0.000000e+00	 0	1.901866e-03	 3.165442e-03	 7.111409e-02	 1.917860e-01	1.414176e-01		 0	38	 TRUE	 TRUE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5466299	0.5954869	U	0.4686274	0.6162291
13773	129	183898	183899	1	 208	Divergent	-	+	 0.000000	0	  0.000000	 -3.49061503	1.369248	3.026826	1.0187989	1225	Peroxiredoxin	O	bacterioferritin comigratory protein homolog	1.359118	2.789519	0.9721743	2897	Rhodanese-related sulfurtransferase	P	thiosulfate sulfurtransferase	 7.221967e-03	27	1.026212e-04	 7.579970e-03	 1.138519e-01	 4.845657e-01	4.155945e-03	0	38	27	FALSE	 TRUE	121	FALSE	0.4469764	0.1875627	0.5480306	0.4469764	0.7761702	0.5718017	0.6679429	0.6472310	N	0.5492530	0.5303927
13773	129	183899	183900	1	  28	Convergent	+	-	 0.000000	0	  0.000000	 -0.11431683	1.359118	2.789519	0.9721743	2897	Rhodanese-related sulfurtransferase	P	thiosulfate sulfurtransferase	1.313744	2.767043	0.9981431	2146	Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases	PR	Rieske iron sulfur protein, putative	 1.054642e-03	 2	2.058790e-03	 1.270163e-02	 1.957423e-01	 6.647391e-01	3.336300e-02		27	 2	 TRUE	 TRUE	122	FALSE	0.4469764	0.2956327	0.5480306	0.4469764	0.6838149	0.4709759	0.7413343	0.6308211	U	0.4686274	0.5557741
13773	129	183900	183901	1	  59	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.313744	2.767043	0.9981431	2146	Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases	PR	Rieske iron sulfur protein, putative	1.379305	2.813341	1.0107902	-	-	-	hypothetical protein	 0.000000e+00	 0	4.298237e-03	 9.922898e-03	 1.018392e-01	 5.359896e-01	1.048905e-01		 2	 0	FALSE	 TRUE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6892978	0.6045311	U	0.4686274	0.6162291
13773	129	183901	183902	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.379305	2.813341	1.0107902	-	-	-	hypothetical protein	1.331173	2.888942	1.0195020	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	2-oxoacid ferredoxin oxidoreductase alpha subunit	 0.000000e+00	 0	2.316638e-03	 8.666437e-03	 1.455740e-01	 5.093706e-01	7.761120e-02		 0	 4	 TRUE	 TRUE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6764170	0.6156404	U	0.4686274	0.6162291
13773	129	183902	183903	1	 -10	Same	+	+	 7.574969	0	 12.827824	 12.82782407	1.331173	2.888942	1.0195020	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	2-oxoacid ferredoxin oxidoreductase alpha subunit	1.369842	2.904076	1.0360836	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-oxoacid ferredoxin oxidoreductase beta subunit	 2.102834e-01	 4	1.495284e-03	 9.804025e-03	 1.155552e-01	 5.705483e-01	4.325634e-02	C	 4	 4	 TRUE	 TRUE	123	 TRUE	2.7258037	1.8739116	0.5480306	2.6891160	0.7323301	1.1488744	0.7079458	0.6266433	Y	1.4497162	0.9155223
13773	129	183903	183904	1	 296	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.369842	2.904076	1.0360836	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-oxoacid ferredoxin oxidoreductase beta subunit	1.576463	3.546035	1.1220628	-	-	-	paREP5a	 0.000000e+00	 0	4.269227e-02	-1.019958e-02	-7.568340e-02	-5.392161e-01	2.182592e+00		 4	 0	 TRUE	 TRUE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3995996	0.4059610	U	0.4686274	0.6162291
13773	129	183904	183905	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.576463	3.546035	1.1220628	-	-	-	paREP5a	1.528190	3.190855	0.9609290	-	-	-	paREP5b	 0.000000e+00	 0	2.330263e-03	 9.605071e-03	 1.082961e-01	 5.467576e-01	2.285828e-02		 0	 0	 TRUE	 TRUE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6973206	0.6363673	U	0.4686274	0.6162291
13773	129	183905	183906	1	 119	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.528190	3.190855	0.9609290	-	-	-	paREP5b	1.469419	3.310634	1.1018818	3370	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	3.454075e-03	 1.384354e-03	 2.277150e-02	 1.778115e-01	1.611071e-01		 0	 5	 TRUE	 TRUE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5413488	0.5897354	U	0.4686274	0.6162291
13773	129	183906	183907	1	   2	Same	+	+	 0.000000	0	  0.000000	 -0.41711044	1.469419	3.310634	1.1018818	3370	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.386505	3.108073	1.0938893	114	Fumarase	C	fumarate hydratase class II	 2.768716e-03	 5	6.874730e-03	-1.169673e-03	 1.692882e-02	-1.422492e-01	6.407370e-01		 5	50	 TRUE	 TRUE	127	 TRUE	0.4469764	0.2400872	0.5480306	0.4469764	0.7448207	0.5102443	0.4791603	0.4712222	U	0.4686274	0.5382395
13773	129	183907	183908	1	 412	Convergent	+	-	 0.000000	0	  0.000000	 -7.65099717	1.386505	3.108073	1.0938893	114	Fumarase	C	fumarate hydratase class II	1.569681	3.386031	1.0767793	492	Thioredoxin reductase	O	thioredoxin reductase (trxB)	 5.860375e-04	48	3.355340e-02	-7.675460e-03	-4.416551e-02	-4.296172e-01	1.791448e+00	0	50	48	 TRUE	 TRUE	128	FALSE	0.4469764	0.1783521	0.5480306	0.4469764	0.7718122	0.4585188	0.4143693	0.4108873	N	0.5492530	0.5274687
13773	129	183908	183909	1	 175	Same	-	-	 0.000000	0	  0.000000	 -0.22439018	1.569681	3.386031	1.0767793	492	Thioredoxin reductase	O	thioredoxin reductase (trxB)	1.482461	2.924526	1.0228206	3350	Uncharacterized conserved protein	S	ribosomal protein L24, conjectural	 1.190151e-02	 2	7.607320e-03	 3.674966e-03	 3.062471e-02	 3.092503e-01	1.762324e-01		48	 2	FALSE	 TRUE	127	 TRUE	0.4469764	0.2697711	0.5480306	0.4469764	0.6838149	0.6132969	0.5956452	0.5859323	U	0.4686274	0.5476247
13773	129	183909	183910	1	  37	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.482461	2.924526	1.0228206	3350	Uncharacterized conserved protein	S	ribosomal protein L24, conjectural	1.537662	3.085536	0.9479026	-	-	-	hypothetical protein	 0.000000e+00	 0	3.047191e-03	 2.680213e-03	 6.852435e-02	 2.714793e-01	1.034044e-01		 2	 0	FALSE	 TRUE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5801967	0.6048471	U	0.4686274	0.6162291
13773	129	183910	183911	1	 104	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.537662	3.085536	0.9479026	-	-	-	hypothetical protein	1.452229	3.326521	1.0982687	-	-	-	hypothetical protein	 0.000000e+00	 0	7.298871e-03	 7.211321e-05	 2.682594e-03	 7.423685e-02	3.611060e-01		 0	 0	FALSE	 TRUE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178991	0.5209641	U	0.4686274	0.6162291
13773	129	183911	183912	1	 270	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.452229	3.326521	1.0982687	-	-	-	hypothetical protein	1.568765	3.436794	1.0740291	3019	Predicted metal-binding protein	R	hypothetical protein	 0.000000e+00	 0	1.358069e-02	 9.811225e-05	 5.686788e-02	 8.416200e-02	4.834678e-01		 0	 0	 TRUE	 TRUE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176838	0.4957719	U	0.4686274	0.6162291
13773	129	183912	183913	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.568765	3.436794	1.0740291	3019	Predicted metal-binding protein	R	hypothetical protein	1.629837	3.895510	1.1765080	785	Cytochrome c biogenesis protein	O	cytochrome C-type biogenesis protein (ccdA), conjectural	 0.000000e+00	 0	3.729825e-03	 2.094440e-02	 3.115047e-01	 7.279706e-01	1.187648e-02		 0	 0	 TRUE	 TRUE	127	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7617075	0.6420390	U	0.4686274	0.6162291
13773	129	183913	183914	1	 432	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.629837	3.895510	1.1765080	785	Cytochrome c biogenesis protein	O	cytochrome C-type biogenesis protein (ccdA), conjectural	1.510920	3.775978	1.1201064	-	-	-	hypothetical protein	 0.000000e+00	 0	1.414134e-02	 1.062227e-02	 7.307082e-02	 5.157912e-01	1.171604e-01		 0	 0	 TRUE	 TRUE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6811281	0.6014840	U	0.4686274	0.6162291
13773	129	183914	183915	1	 121	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.510920	3.775978	1.1201064	-	-	-	hypothetical protein	1.312616	3.016075	0.9838714	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 0.000000e+00	 0	3.932463e-02	-8.261005e-03	-3.594218e-02	-5.184028e-01	2.193945e+00		 0	 2	 TRUE	 TRUE	129	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4032511	0.4058196	U	0.4686274	0.6162291
13773	129	183915	183916	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.312616	3.016075	0.9838714	4113	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.519243	3.235523	0.9679694	-	-	-	hypothetical protein	 0.000000e+00	 0	4.269510e-02	-9.416124e-03	-1.265759e-01	-5.625969e-01	2.339515e+00		 2	 0	FALSE	 TRUE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3977588	0.4046968	U	0.4686274	0.6162291
13773	129	183916	183917	1	 125	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.519243	3.235523	0.9679694	-	-	-	hypothetical protein	1.384224	3.175011	1.1301242	-	-	-	conserved within P. aerophilum, degenerate	 0.000000e+00	 0	1.823020e-02	-4.557433e-03	-3.278292e-02	-3.415260e-01	1.369780e+00		 0	 0	FALSE	 TRUE	127	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4294364	0.4210285	U	0.4686274	0.6162291
13773	129	183917	183918	1	  65	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.384224	3.175011	1.1301242	-	-	-	conserved within P. aerophilum, degenerate	1.417841	3.105563	1.1108843	2217	Cation transport ATPase	P	cation-transporting ATPase (P-type)	 0.000000e+00	 0	1.130068e-03	 2.253655e-03	 3.848958e-02	 1.307338e-01	1.019290e-01		 0	55	 TRUE	 TRUE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5244228	0.6058668	U	0.4686274	0.6162291
13773	129	183918	183919	1	  42	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.417841	3.105563	1.1108843	2217	Cation transport ATPase	P	cation-transporting ATPase (P-type)	1.485489	3.329922	1.0969892	2445	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.576248e-03	-1.143988e-03	 7.455251e-03	-9.692021e-02	4.185683e-01		55	 0	 TRUE	 TRUE	129	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4930484	0.5090246	U	0.4686274	0.6162291
13773	129	183919	183920	1	  16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.485489	3.329922	1.0969892	2445	Uncharacterized conserved protein	S	conserved hypothetical protein	1.482890	3.251512	1.0792699	1708	Predicted nucleotidyltransferases	R	paREP11	 0.000000e+00	 0	6.754880e-06	 1.073908e-03	 3.286120e-02	 1.591133e-01	6.031303e-04		 0	 0	 TRUE	 TRUE	130	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5342321	0.6529329	U	0.4686274	0.6162291
13773	129	183920	183921	1	  62	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.482890	3.251512	1.0792699	1708	Predicted nucleotidyltransferases	R	paREP11	1.403041	3.396718	1.1667037	2245	Predicted membrane protein	S	hypothetical protein	 0.000000e+00	 0	6.375801e-03	-1.522927e-03	 6.349003e-03	-1.490203e-01	5.960835e-01		 0	 0	 TRUE	 TRUE	131	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4769023	0.4771498	U	0.4686274	0.6162291
13773	129	183921	183922	1	 204	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.403041	3.396718	1.1667037	2245	Predicted membrane protein	S	hypothetical protein	1.442531	3.040307	1.0904076	-	-	-	hypothetical protein	 0.000000e+00	 0	1.559448e-03	 4.284927e-04	 2.001007e-02	-5.026478e-03	1.586521e-01		 0	 0	FALSE	 TRUE	130	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196716	0.5904345	U	0.4686274	0.6162291
13773	129	183922	183923	1	  55	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.442531	3.040307	1.0904076	-	-	-	hypothetical protein	1.436334	3.472309	1.1796486	477	Permeases of the major facilitator superfamily	GEPR	transport protein, putative	 0.000000e+00	 0	3.839728e-05	 1.334483e-04	 2.267442e-02	-6.408259e-04	3.864392e-03		 0	20	 TRUE	 TRUE	131	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199869	0.6474175	U	0.4686274	0.6162291
13773	129	183923	183924	1	 166	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.436334	3.472309	1.1796486	477	Permeases of the major facilitator superfamily	GEPR	transport protein, putative	1.460737	3.418787	1.1784385	4756	Predicted cation transporter	R	conserved hypothetical protein	 1.759678e-02	 4	5.955047e-04	-1.407135e-04	 1.873832e-02	-9.160041e-03	5.551213e-02		20	 4	FALSE	 TRUE	130	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.6591545	0.5188424	0.6218902	U	0.4686274	0.6162291
13773	129	183924	183925	1	 713	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.460737	3.418787	1.1784385	4756	Predicted cation transporter	R	conserved hypothetical protein	1.620547	3.636324	1.1231104	675	Transposase and inactivated derivatives	L	paREP12, degenerate	 0.000000e+00	 0	2.553925e-02	 1.580653e-03	 1.116610e-01	 1.674570e-01	5.061400e-01		 4	 0	FALSE	 TRUE	129	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5379038	0.4920423	U	0.4686274	0.6162291
13773	129	183925	183926	1	 441	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.620547	3.636324	1.1231104	675	Transposase and inactivated derivatives	L	paREP12, degenerate	1.406713	3.145549	1.0258568	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	4.572530e-02	-7.557869e-03	-1.352249e-01	-3.073491e-01	1.538133e+00		 0	 0	 TRUE	 TRUE	130	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4383565	0.4158343	U	0.4686274	0.6162291
13773	129	183926	183927	1	 138	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.406713	3.145549	1.0258568	-	-	-	conserved hypothetical protein	1.388733	2.973753	1.0528135	-	-	-	hypothetical protein	 0.000000e+00	 0	3.232507e-04	 2.799642e-03	 5.837284e-02	 1.744272e-01	2.799137e-02		 0	 0	FALSE	 TRUE	129	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5400419	0.6340416	U	0.4686274	0.6162291
13773	129	183927	183928	1	 103	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.388733	2.973753	1.0528135	-	-	-	hypothetical protein	1.404541	2.979352	1.0767976	147	Anthranilate/para-aminobenzoate synthases component I	EH	hypothetical protein	 0.000000e+00	 0	2.498897e-04	 2.935693e-03	 5.066639e-02	 1.877243e-01	1.994099e-02		 0	 0	 TRUE	 TRUE	130	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5452392	0.6374861	U	0.4686274	0.6162291
13773	129	183928	183929	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.404541	2.979352	1.0767976	147	Anthranilate/para-aminobenzoate synthases component I	EH	hypothetical protein	1.351702	2.975510	1.0084479	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein, conjectural	 0.000000e+00	 0	2.791967e-03	 4.670660e-03	 9.501217e-02	 2.827173e-01	1.592641e-01		 0	 1	 TRUE	 TRUE	131	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5857086	0.5901897	U	0.4686274	0.6162291
13773	129	183929	183930	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.351702	2.975510	1.0084479	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein, conjectural	1.404096	3.454968	1.1951689	2064	Flp pilus assembly protein TadC	NU	hypothetical protein	 0.000000e+00	 0	2.745086e-03	 4.715072e-03	 5.631035e-02	 2.886073e-01	1.531974e-01		 1	 0	 TRUE	 TRUE	132	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5886415	0.5924418	U	0.4686274	0.6162291
13773	129	183930	183931	1	  66	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.404096	3.454968	1.1951689	2064	Flp pilus assembly protein TadC	NU	hypothetical protein	1.435287	3.237900	1.0523926	-	-	-	P. aerophilum family 453	 0.000000e+00	 0	9.728744e-04	 7.617718e-04	 2.462240e-02	 2.222276e-02	1.004642e-01		 0	 0	 TRUE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175383	0.6066151	U	0.4686274	0.6162291
13773	129	183931	183932	1	  67	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.435287	3.237900	1.0523926	-	-	-	P. aerophilum family 453	1.363003	3.189419	1.0863858	-	-	-	P. aerophilum family 453	 0.000000e+00	 0	5.224977e-03	 1.423622e-03	 5.656502e-02	 4.176972e-02	4.195619e-01		 0	 0	 TRUE	 TRUE	134	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183841	0.5088109	U	0.4686274	0.6162291
13773	129	183932	183933	1	  56	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.363003	3.189419	1.0863858	-	-	-	P. aerophilum family 453	1.414990	3.107658	1.0162808	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	 0.000000e+00	 0	2.702715e-03	 3.217619e-03	 4.188349e-02	 1.844377e-01	1.988215e-01		 0	 4	FALSE	 TRUE	133	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5437215	0.5803915	U	0.4686274	0.6162291
13773	129	183933	183934	1	 -30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.414990	3.107658	1.0162808	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein	1.457098	3.344225	1.0817281	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	 0.000000e+00	 0	1.773016e-03	-2.076661e-04	 1.502704e-02	-3.905033e-02	1.685849e-01		 4	 0	 TRUE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5093597	0.5880602	U	0.4686274	0.6162291
13773	129	183934	183935	1	 -16	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.457098	3.344225	1.0817281	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein	1.320371	2.931974	1.0585210	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	 0.000000e+00	 0	1.869419e-02	-7.474445e-04	 5.551086e-02	-1.341494e-01	1.094216e+00		 0	58	 TRUE	 TRUE	135	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4808864	0.4333218	U	0.4686274	0.6162291
13773	129	183935	183936	1	  83	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.320371	2.931974	1.0585210	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	ABC transporter ATP-binding protein, putative	1.446377	3.197837	1.0299687	-	-	-	paREP5ab, internal deletion and authentic frameshift	 0.000000e+00	 0	1.587744e-02	 6.572419e-04	-1.510890e-02	-4.127673e-02	8.881941e-01		58	 0	FALSE	 TRUE	134	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5087566	0.4478833	U	0.4686274	0.6162291
13773	129	183936	183937	1	  96	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.446377	3.197837	1.0299687	-	-	-	paREP5ab, internal deletion and authentic frameshift	1.504075	3.373064	1.1139801	-	-	-	hypothetical protein	 0.000000e+00	 0	3.329146e-03	-2.642697e-04	 2.463214e-02	 2.449039e-02	2.360036e-01		 0	 0	 TRUE	 TRUE	135	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173960	0.5682360	U	0.4686274	0.6162291
13773	129	183937	183938	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.504075	3.373064	1.1139801	-	-	-	hypothetical protein	1.423926	3.151385	1.0841519	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	6.423932e-03	-1.447027e-03	-1.313734e-03	-9.877790e-02	5.149136e-01		 0	 0	FALSE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4918315	0.4907464	U	0.4686274	0.6162291
13773	129	183938	183939	1	   2	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.423926	3.151385	1.0841519	-	-	-	conserved within P. aerophilum	1.393067	3.042114	1.0346168	-	-	-	hypothetical protein	 0.000000e+00	 0	9.522732e-04	 1.602034e-03	 4.619241e-02	 8.766004e-02	8.194620e-02		 0	 0	FALSE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177127	0.6136849	U	0.4686274	0.6162291
13773	129	183939	183940	1	  36	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.393067	3.042114	1.0346168	-	-	-	hypothetical protein	1.552174	3.357382	1.0944538	608	Single-stranded DNA-specific exonuclease	L	conserved hypothetical protein part 1, authentic frameshift	 0.000000e+00	 0	2.531510e-02	-5.878158e-03	-3.083709e-02	-3.531758e-01	1.489037e+00		 0	 0	FALSE	 TRUE	132	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4276226	0.4173627	U	0.4686274	0.6162291
13773	129	183940	183941	1	 -24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.552174	3.357382	1.0944538	608	Single-stranded DNA-specific exonuclease	L	conserved hypothetical protein part 1, authentic frameshift	1.425377	3.049794	1.0416300	608	Single-stranded DNA-specific exonuclease	L	conserved hypothetical protein part 2, authentic frameshift	 0.000000e+00	 0	1.607760e-02	-2.621943e-03	-3.399343e-02	-1.269136e-01	8.425070e-01	L	 0	 0	 TRUE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4827091	0.4514144	Y	1.4497162	0.7118045
13773	129	183941	183942	1	 -49	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.425377	3.049794	1.0416300	608	Single-stranded DNA-specific exonuclease	L	conserved hypothetical protein part 2, authentic frameshift	1.368850	3.081893	1.0966477	616	Periplasmic serine proteases (ClpP class)	OU	protease IV, conjectural	 0.000000e+00	 0	3.195252e-03	 2.147445e-03	 6.142981e-02	 1.135063e-01	2.496164e-01		 0	 0	 TRUE	 TRUE	134	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5205943	0.5628925	U	0.4686274	0.6162291
13773	129	183942	183943	1	 -19	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.368850	3.081893	1.0966477	616	Periplasmic serine proteases (ClpP class)	OU	protease IV, conjectural	1.396237	3.138331	1.1013228	265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	O	serine protease	 0.000000e+00	 0	7.500238e-04	 4.552740e-03	 6.439286e-02	 3.050803e-01	4.551984e-02		 0	 7	FALSE	 TRUE	133	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5936207	0.6257919	U	0.4686274	0.6162291
13773	129	183943	183944	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.14660347	1.396237	3.138331	1.1013228	265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	O	serine protease	1.328372	2.835333	0.9856977	1917	Uncharacterized conserved protein, contains double-stranded beta-helix domain	S	conserved hypothetical protein	 2.114183e-04	 7	4.605631e-03	 6.785364e-03	 1.307817e-01	 3.977939e-01	1.736644e-01		 7	 9	 TRUE	 TRUE	134	FALSE	0.4469764	0.2774393	0.5480306	0.4469764	0.7596462	0.4443167	0.6335969	0.5866463	U	0.4686274	0.5500440
13773	129	183944	183945	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.328372	2.835333	0.9856977	1917	Uncharacterized conserved protein, contains double-stranded beta-helix domain	S	conserved hypothetical protein	1.416060	3.203858	1.0628580	-	-	-	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	7.689127e-03	 4.346736e-03	 3.629805e-02	 2.209966e-01	3.835820e-01		 9	 0	FALSE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5574890	0.5159995	U	0.4686274	0.6162291
13773	129	183945	183946	1	  63	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.416060	3.203858	1.0628580	-	-	-	P. aerophilum family 453, possible regulatory protein	1.400337	3.087048	1.0662294	624	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	E	peptidase family M20/M25/M40	 0.000000e+00	 0	2.472070e-04	 1.803981e-03	 4.527972e-02	 1.059306e-01	2.722627e-02		 0	11	FALSE	 TRUE	132	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5194395	0.6344003	U	0.4686274	0.6162291
13773	129	183946	183947	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.400337	3.087048	1.0662294	624	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	E	peptidase family M20/M25/M40	1.448840	3.166973	1.0873087	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	 0.000000e+00	 0	2.352587e-03	 1.303277e-04	 1.565826e-02	-2.985318e-02	2.397466e-01	0	11	 0	 TRUE	 TRUE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5120058	0.5661218	N	0.5492530	0.6245624
13773	129	183947	183948	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.448840	3.166973	1.0873087	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	1.332870	3.105544	1.0575958	-	-	-	P. aerophilum family 453	 0.000000e+00	 0	1.344909e-02	 3.025458e-04	 5.993277e-02	-6.151399e-02	8.709201e-01		 0	 0	 TRUE	 TRUE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5034120	0.4486372	U	0.4686274	0.6162291
13773	129	183948	183949	1	  21	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.332870	3.105544	1.0575958	-	-	-	P. aerophilum family 453	1.329749	2.921974	1.0359797	-	-	-	hypothetical protein	 0.000000e+00	 0	9.740293e-06	 1.441757e-02	 1.912154e-01	 7.494123e-01	5.889944e-05		 0	 0	 TRUE	 TRUE	135	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7666953	0.6554240	U	0.4686274	0.6162291
13773	129	183949	183950	1	 187	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.329749	2.921974	1.0359797	-	-	-	hypothetical protein	1.350376	2.652701	1.1641298	-	-	-	paREP8, degenerate	 0.000000e+00	 0	4.254808e-04	 1.228804e-02	 1.527493e-01	 6.753386e-01	8.623467e-03		 0	 0	 TRUE	 TRUE	136	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7448193	0.6437142	U	0.4686274	0.6162291
13773	129	183950	183951	1	 255	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.350376	2.652701	1.1641298	-	-	-	paREP8, degenerate	1.406632	3.044956	1.0428376	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	 0.000000e+00	 0	3.164693e-03	 4.521605e-03	 5.277954e-02	 2.670359e-01	1.873568e-01		 0	 7	 TRUE	 TRUE	137	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5764836	0.5834990	U	0.4686274	0.6162291
13773	129	183951	183952	1	   5	Same	+	+	 0.000000	0	  0.000000	 -0.13580154	1.406632	3.044956	1.0428376	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	1.426580	3.152890	1.0786613	1986	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.296813e-02	 7	3.979482e-04	 1.110627e-03	 3.019888e-02	 5.356551e-02	3.535439e-02		 7	 8	 TRUE	 TRUE	138	 TRUE	0.4469764	0.2789631	0.5480306	0.4469764	0.7596462	0.6226399	0.5187674	0.6298812	U	0.4686274	0.5505244
13773	129	183952	183953	1	  28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.426580	3.152890	1.0786613	1986	Uncharacterized conserved protein	S	conserved hypothetical protein	1.345541	2.747353	1.0847804	-	-	-	hypothetical protein	 0.000000e+00	 0	6.567417e-03	 2.626438e-03	 7.833756e-02	 1.256637e-01	4.235482e-01		 8	 0	 TRUE	 TRUE	139	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5231989	0.5080957	U	0.4686274	0.6162291
13773	129	183953	183954	1	 265	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.345541	2.747353	1.0847804	-	-	-	hypothetical protein	1.605128	3.528594	1.1255324	-	-	-	hypothetical protein	 0.000000e+00	 0	6.738555e-02	-1.627318e-02	-1.379671e-01	-7.044597e-01	2.822297e+00		 0	 0	FALSE	 TRUE	138	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3867651	0.4017316	U	0.4686274	0.6162291
13773	129	183954	183955	1	 182	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.605128	3.528594	1.1255324	-	-	-	hypothetical protein	1.311976	2.825695	0.9879400	-	-	-	paREP8	 0.000000e+00	 0	8.593801e-02	-2.143324e-02	-2.405256e-01	-8.023199e-01	3.211330e+00		 0	 0	FALSE	 TRUE	137	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3829626	0.4004329	U	0.4686274	0.6162291
13773	129	183955	183956	1	 436	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.311976	2.825695	0.9879400	-	-	-	paREP8	1.475249	3.394207	1.1231295	-	-	-	hypothetical protein	 0.000000e+00	 0	2.665802e-02	-3.325961e-03	-6.606546e-02	-2.947010e-01	1.536230e+00		 0	 0	FALSE	 TRUE	136	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4418574	0.4159632	U	0.4686274	0.6162291
13773	129	183956	183957	1	 465	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.475249	3.394207	1.1231295	-	-	-	hypothetical protein	1.499698	3.494587	1.1575954	-	-	-	paREP1	 0.000000e+00	 0	5.977558e-04	 1.152386e-03	 3.869212e-02	 1.624918e-01	3.449387e-02		 0	 0	 TRUE	 TRUE	137	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5352590	0.6302077	U	0.4686274	0.6162291
13773	129	183957	183958	1	 895	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.499698	3.494587	1.1575954	-	-	-	paREP1	1.295578	2.810093	0.9614582	214	Pyridoxine biosynthesis enzyme	H	stress induced protein, conjectural	 0.000000e+00	 0	4.166506e-02	-7.526689e-03	-1.153727e-02	-4.831992e-01	2.132990e+00		 0	33	 TRUE	 TRUE	138	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4075311	0.4068150	U	0.4686274	0.6162291
13773	129	183958	183959	1	  -3	Same	+	+	37.300049	0	 74.108970	 73.53424881	1.295578	2.810093	0.9614582	214	Pyridoxine biosynthesis enzyme	H	stress induced protein, conjectural	1.355637	2.934483	1.0265251	311	Predicted glutamine amidotransferase involved in pyridoxine biosynthesis	H	conserved hypothetical protein	 5.779832e-01	31	3.607083e-03	 1.492019e-02	 1.568191e-01	 7.130849e-01	4.262022e-02	H	33	31	 TRUE	 TRUE	139	 TRUE	2.1116198	2.0588056	0.5480306	2.1241672	0.7752555	1.2628730	0.7590053	0.6270113	Y	1.4497162	0.9367150
13773	129	183959	183960	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.355637	2.934483	1.0265251	311	Predicted glutamine amidotransferase involved in pyridoxine biosynthesis	H	conserved hypothetical protein	1.313745	2.803925	0.9540756	-	-	-	paREP1	 0.000000e+00	 0	1.754920e-03	 1.318057e-02	 1.996792e-01	 6.809588e-01	2.672209e-02		31	 0	 TRUE	 TRUE	140	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7465712	0.6346538	U	0.4686274	0.6162291
13773	129	183960	183961	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.313745	2.803925	0.9540756	-	-	-	paREP1	1.497212	3.605536	1.1919972	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.366004e-02	-6.306889e-03	-9.578858e-02	-4.439516e-01	1.955275e+00		 0	 0	 TRUE	FALSE	139	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4128419	0.4087775	U	0.4686274	0.6162291
13773	129	183961	183962	1	  19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.497212	3.605536	1.1919972	-	-	-	conserved within P. aerophilum	1.404334	3.226240	1.0696772	-	-	-	hypothetical protein	 0.000000e+00	 0	8.626327e-03	-2.156197e-03	-4.180737e-03	-1.813956e-01	7.388346e-01		 0	 0	 TRUE	FALSE	138	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4696907	0.4609040	U	0.4686274	0.6162291
13773	129	183962	183963	1	  90	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.404334	3.226240	1.0696772	-	-	-	hypothetical protein	1.359137	3.346044	1.1702030	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	2.042785e-03	 4.341475e-03	 8.748982e-02	 2.710935e-01	1.268081e-01		 0	 0	 TRUE	FALSE	137	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5799602	0.5988589	U	0.4686274	0.6162291
13773	129	183963	183964	1	  49	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.359137	3.346044	1.1702030	-	-	-	conserved hypothetical protein	1.575819	3.422707	1.1059855	-	-	-	hypothetical protein	 0.000000e+00	 0	4.695117e-02	-1.147907e-02	-9.577673e-02	-5.947289e-01	2.386705e+00		 0	 0	 TRUE	FALSE	136	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3947473	0.4041403	U	0.4686274	0.6162291
13773	129	183964	183965	1	 -16	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.575819	3.422707	1.1059855	-	-	-	hypothetical protein	1.426274	3.055489	1.0638809	1145	Ferredoxin	C	polyferredoxin	 0.000000e+00	 0	2.236367e-02	-3.125435e-03	-5.351975e-02	-1.284715e-01	9.484936e-01		 0	 0	FALSE	FALSE	137	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4824675	0.4427224	U	0.4686274	0.6162291
13773	129	183965	183966	1	  27	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.426274	3.055489	1.0638809	1145	Ferredoxin	C	polyferredoxin	1.439000	3.091070	1.0876779	4670	Acyl CoA:acetate/3-ketoacid CoA transferase	I	coA transferase, putative	 0.000000e+00	 0	1.619618e-04	 3.112819e-04	 2.316497e-02	 3.984547e-03	1.742481e-02	0	 0	16	 TRUE	FALSE	136	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196118	0.6390912	N	0.5492530	0.6245624
13773	129	183966	183967	1	 134	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.439000	3.091070	1.0876779	4670	Acyl CoA:acetate/3-ketoacid CoA transferase	I	coA transferase, putative	1.446850	3.147456	1.0138607	2002	Regulators of stationary/sporulation gene expression	K	conserved hypothetical protein	 1.011049e-02	 3	6.161042e-05	 5.630052e-05	 2.105839e-02	-1.380014e-03	6.370563e-03	0	16	 3	 TRUE	FALSE	135	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5976332	0.5199808	0.6451734	N	0.5492530	0.6245624
13773	129	183967	183968	1	 -16	Same	+	+	 5.010635	0	  5.010635	  4.95144642	1.446850	3.147456	1.0138607	2002	Regulators of stationary/sporulation gene expression	K	conserved hypothetical protein	1.523765	3.372059	1.0451670	1848	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	 1.392617e-01	 3	5.915986e-03	-3.287985e-04	 3.014218e-02	 3.487671e-02	3.428943e-01		 3	 4	FALSE	FALSE	136	 TRUE	2.8224171	1.7637291	0.5480306	2.8872874	0.7136133	1.0767792	0.5175781	0.5266146	U	0.4686274	0.8581552
13773	129	183968	183969	1	   7	Convergent	+	-	 0.000000	0	  0.000000	 -0.07232066	1.523765	3.372059	1.0451670	1848	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein	1.388571	3.068182	1.0501531	-	-	-	paREP8	 4.118834e-02	 1	1.827742e-02	-4.546551e-03	-3.570082e-02	-3.281359e-01	1.328774e+00		 4	 1	FALSE	FALSE	137	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.8108260	0.4333888	0.4230623	U	0.4686274	0.5573725
13773	129	183969	183970	1	 312	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.388571	3.068182	1.0501531	-	-	-	paREP8	1.472186	3.266246	1.1165881	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase	 8.054069e-03	 1	6.991365e-03	-1.306231e-03	-3.459556e-03	-1.455759e-01	6.346085e-01		 1	41	 TRUE	FALSE	136	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.5809077	0.4781623	0.4721311	U	0.4686274	0.5573725
13773	129	183970	183971	1	  12	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.472186	3.266246	1.1165881	1028	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	IQR	short chain dehydrogenase	1.402350	3.265442	1.0828666	2427	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.877028e-03	-1.019736e-03	 1.382481e-02	-1.120150e-01	4.602732e-01		41	 0	 TRUE	FALSE	135	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4878022	0.5020955	U	0.4686274	0.6162291
13773	129	183971	183972	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.402350	3.265442	1.0828666	2427	Uncharacterized conserved protein	S	conserved hypothetical protein	1.349413	2.945366	1.0170575	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	conserved hypothetical protein	 0.000000e+00	 0	2.802336e-03	 5.001417e-03	 9.951834e-02	 3.081925e-01	1.496140e-01		 0	 4	 TRUE	FALSE	134	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5953911	0.5933123	U	0.4686274	0.6162291
13773	129	183972	183973	1	  72	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.349413	2.945366	1.0170575	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	conserved hypothetical protein	1.456310	3.657662	1.2428926	3301	Formate-dependent nitrite reductase, membrane component	P	molybdopterin oxidoreductase, membrane subunit	 0.000000e+00	 0	1.142710e-02	-5.014839e-04	-1.147515e-02	-1.115249e-01	8.538157e-01		 4	 0	 TRUE	FALSE	133	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4879186	0.4498973	U	0.4686274	0.6162291
13773	129	183973	183974	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.456310	3.657662	1.2428926	3301	Formate-dependent nitrite reductase, membrane component	P	molybdopterin oxidoreductase, membrane subunit	1.511137	3.124213	1.0127483	437	Fe-S-cluster-containing hydrogenase components 1	C	molybdopterin oxidoreductase, iron-sulfur binding subunit	 0.000000e+00	 0	3.005941e-03	 2.937887e-04	 3.317571e-02	 8.106919e-02	1.807718e-01	0	 0	 0	 TRUE	FALSE	132	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177429	0.5848968	N	0.5492530	0.6245624
13773	129	183974	183975	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511137	3.124213	1.0127483	437	Fe-S-cluster-containing hydrogenase components 1	C	molybdopterin oxidoreductase, iron-sulfur binding subunit	1.420734	3.131720	1.0866802	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit part 2, authentic frameshift	 0.000000e+00	 0	8.172669e-03	-1.831682e-03	-7.356163e-03	-1.194245e-01	6.056017e-01	C	 0	 0	 TRUE	FALSE	131	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4853372	0.4761308	Y	1.4497162	0.7118045
13773	129	183975	183976	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.420734	3.131720	1.0866802	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit part 2, authentic frameshift	1.415721	3.093811	1.0865642	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit part 1, authentic frameshift	 0.000000e+00	 0	2.512976e-05	 1.093659e-03	 3.436948e-02	 5.406380e-02	2.191648e-03	C	 0	 0	 TRUE	FALSE	130	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187593	0.6499017	Y	1.4497162	0.7118045
13773	129	183976	183977	1	  95	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.415721	3.093811	1.0865642	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit part 1, authentic frameshift	1.623658	3.348491	1.0777559	-	-	-	hypothetical protein	 0.000000e+00	 0	4.323771e-02	-6.145009e-03	 2.101752e-02	-2.320402e-01	1.344745e+00		 0	 0	 TRUE	FALSE	129	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4563070	0.4225072	U	0.4686274	0.6162291
13773	129	183977	183978	1	  35	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.623658	3.348491	1.0777559	-	-	-	hypothetical protein	1.427038	3.256597	1.1152006	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	3.865925e-02	-4.195444e-03	-1.021708e-01	-1.371462e-01	1.111948e+00		 0	 0	 TRUE	FALSE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4800265	0.4321685	U	0.4686274	0.6162291
13773	129	183978	183979	1	 -19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.427038	3.256597	1.1152006	-	-	-	conserved hypothetical protein	1.680742	3.911576	1.1493915	-	-	-	hypothetical protein	 0.000000e+00	 0	6.436561e-02	-5.585707e-03	 8.750256e-02	-1.456595e-01	1.233242e+00		 0	 0	 TRUE	FALSE	127	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4777858	0.4271864	U	0.4686274	0.6162291
13773	129	183979	183980	1	 275	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.680742	3.911576	1.1493915	-	-	-	hypothetical protein	1.423777	3.224928	1.0515196	-	-	-	paREP5ab, internal deletion and authentic frameshift	 0.000000e+00	 0	6.603087e-02	-6.333605e-03	-1.849607e-01	-1.794996e-01	1.312897e+00		 0	 0	 TRUE	FALSE	126	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4710403	0.4237791	U	0.4686274	0.6162291
13773	129	183980	183981	1	  20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.423777	3.224928	1.0515196	-	-	-	paREP5ab, internal deletion and authentic frameshift	1.611162	3.551840	1.1308714	-	-	-	hypothetical protein	 0.000000e+00	 0	3.511316e-02	-4.412123e-03	 3.203748e-02	-1.657030e-01	1.149487e+00		 0	 0	FALSE	FALSE	127	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4732939	0.4305738	U	0.4686274	0.6162291
13773	129	183981	183982	1	  15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.611162	3.551840	1.1308714	-	-	-	hypothetical protein	1.539793	3.266599	1.1612734	-	-	-	hypothetical protein	 0.000000e+00	 0	5.093557e-03	 1.412368e-02	 1.408967e-01	 6.315728e-01	2.929010e-02		 0	 0	 TRUE	FALSE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7297619	0.6334684	U	0.4686274	0.6162291
13773	129	183982	183983	1	  46	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.539793	3.266599	1.1612734	-	-	-	hypothetical protein	1.413193	3.101166	1.0949745	-	-	-	paREP6	 0.000000e+00	 0	1.602756e-02	-3.376862e-03	-3.488514e-02	-2.026730e-01	9.954005e-01		 0	 0	 TRUE	FALSE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4632313	0.4395482	U	0.4686274	0.6162291
13773	129	183983	183984	1	 -21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413193	3.101166	1.0949745	-	-	-	paREP6	1.412414	3.074276	1.0715413	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	6.077939e-07	 1.488994e-03	 3.830023e-02	 8.237676e-02	3.769564e-05		 0	 0	 TRUE	FALSE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177101	0.6555210	U	0.4686274	0.6162291
13773	129	183984	183985	1	 -19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.412414	3.074276	1.0715413	-	-	-	conserved hypothetical protein	1.464464	3.475481	1.1499874	-	-	-	paREP6	 0.000000e+00	 0	2.709237e-03	-5.095004e-04	 1.135586e-02	-6.278445e-02	2.565660e-01		 0	 0	 TRUE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5031809	0.5600453	U	0.4686274	0.6162291
13773	129	183985	183986	1	 228	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.464464	3.475481	1.1499874	-	-	-	paREP6	1.461397	3.238656	1.1150198	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	9.405465e-06	 1.307659e-04	 2.208693e-02	 4.169020e-02	5.660236e-04		 0	 0	 TRUE	FALSE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183393	0.6530578	U	0.4686274	0.6162291
13773	129	183986	183987	1	   7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.461397	3.238656	1.1150198	-	-	-	P. aerophilum family 1964 protein	1.422733	3.077684	1.0346589	5550	Predicted aspartyl protease	O	conserved within P. aerophilum	 0.000000e+00	 0	1.494910e-03	-2.867196e-04	 1.921704e-02	-3.784642e-02	1.514004e-01		 0	 0	FALSE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5094931	0.5927845	U	0.4686274	0.6162291
13773	129	183987	183988	1	  49	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.422733	3.077684	1.0346589	5550	Predicted aspartyl protease	O	conserved within P. aerophilum	1.552959	3.364299	1.1044575	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.695877e-02	-2.910864e-03	 1.081382e-02	-1.482193e-01	9.041777e-01		 0	 0	 TRUE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4774080	0.4460064	U	0.4686274	0.6162291
13773	129	183988	183989	1	  93	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.552959	3.364299	1.1044575	-	-	-	conserved within P. aerophilum	1.451433	3.336794	1.0994001	-	-	-	hypothetical protein	 0.000000e+00	 0	1.030754e-02	 4.058882e-06	-5.411540e-03	 7.295167e-02	4.325864e-01		 0	 0	 TRUE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179775	0.5070154	U	0.4686274	0.6162291
13773	129	183989	183990	1	 412	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.451433	3.336794	1.0994001	-	-	-	hypothetical protein	1.464901	3.174646	1.1027993	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit	 0.000000e+00	 0	1.813852e-04	 5.398161e-07	 2.120736e-02	 2.115079e-02	1.489037e-02		 0	 8	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5175851	0.6404563	U	0.4686274	0.6162291
13773	129	183990	183991	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.464901	3.174646	1.1027993	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	molybdopterin oxidoreductase, molybdopterin binding subunit	1.528964	3.317503	1.0929392	437	Fe-S-cluster-containing hydrogenase components 1	C	molybdopterin oxidoreductase, iron-sulfur binding subunit	 0.000000e+00	 0	4.104067e-03	 1.047819e-03	 4.780656e-02	 1.468805e-01	2.050290e-01	C	 8	 0	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5297381	0.5780796	Y	1.4497162	0.7118045
13773	129	183991	183992	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.528964	3.317503	1.0929392	437	Fe-S-cluster-containing hydrogenase components 1	C	molybdopterin oxidoreductase, iron-sulfur binding subunit	1.481566	3.692880	1.1869757	3301	Formate-dependent nitrite reductase, membrane component	P	molybdopterin oxidoreductase, membrane subunit	 0.000000e+00	 0	2.246559e-03	 2.340547e-03	 3.513518e-02	 2.535621e-01	8.639900e-02	0	 0	 1	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5714096	0.6124500	N	0.5492530	0.6245624
13773	129	183992	183993	1	 120	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.481566	3.692880	1.1869757	3301	Formate-dependent nitrite reductase, membrane component	P	molybdopterin oxidoreductase, membrane subunit	1.501455	3.165412	1.0494619	-	-	-	paREP1	 0.000000e+00	 0	3.955719e-04	 1.510521e-03	 4.245166e-02	 1.944459e-01	1.887197e-02		 1	 0	FALSE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5477285	0.6382319	U	0.4686274	0.6162291
13773	129	183993	183994	1	  70	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.501455	3.165412	1.0494619	-	-	-	paREP1	1.486482	3.231015	1.1060169	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	2.241822e-04	 1.756640e-03	 3.803908e-02	 2.161827e-01	9.056378e-03		 0	 2	FALSE	FALSE	124	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5557145	0.6434772	U	0.4686274	0.6162291
13773	129	183994	183995	1	 238	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.486482	3.231015	1.1060169	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.413306	3.016774	1.0635902	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	 1.134242e-03	 2	5.354716e-03	-1.336433e-03	 5.668743e-03	-1.182400e-01	4.920436e-01		 2	 3	 TRUE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4743646	0.4855737	0.4938708	U	0.4686274	0.6162291
13773	129	183995	183996	1	  33	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413306	3.016774	1.0635902	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	1.554449	3.599203	1.1343807	517	FOG: CBS domain	R	conserved protein with CBS domains	 5.374391e-03	 3	1.992142e-02	-3.925080e-03	-1.867968e-03	-2.139993e-01	1.084603e+00		 3	 9	 TRUE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5484663	0.4604317	0.4341358	U	0.4686274	0.6162291
13773	129	183996	183997	1	 -61	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.554449	3.599203	1.1343807	517	FOG: CBS domain	R	conserved protein with CBS domains	1.553896	3.610828	1.1825718	477	Permeases of the major facilitator superfamily	GEPR	sugar transporter, putative	 0.000000e+00	 0	3.067872e-07	 1.056358e-02	 1.439609e-01	 5.755241e-01	5.300950e-06		 9	 0	 TRUE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7107558	0.6558673	U	0.4686274	0.6162291
13773	129	183997	183998	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.553896	3.610828	1.1825718	477	Permeases of the major facilitator superfamily	GEPR	sugar transporter, putative	1.375583	2.933100	1.0421685	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	 0.000000e+00	 0	3.179540e-02	-7.770724e-03	-8.220700e-02	-4.737900e-01	1.912585e+00		 0	38	 TRUE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4090915	0.4095588	U	0.4686274	0.6162291
13773	129	183998	183999	1	 235	Same	-	-	 0.000000	0	  0.000000	 -0.79095930	1.375583	2.933100	1.0421685	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase	1.323962	2.957069	1.0574064	460	Homoserine dehydrogenase	E	homoserine dehydrogenase	 1.396676e-02	13	2.664678e-03	 9.660494e-03	 1.603338e-01	 5.539551e-01	6.768783e-02	0	38	13	 TRUE	FALSE	119	 TRUE	0.4469764	0.2184029	0.5480306	0.4469764	0.7781369	0.6327344	0.7004330	0.6184898	N	0.5492530	0.5401670
13773	129	183999	184000	1	  49	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.323962	2.957069	1.0574064	460	Homoserine dehydrogenase	E	homoserine dehydrogenase	1.419458	3.163189	1.0619968	-	-	-	paREP1	 0.000000e+00	 0	9.119330e-03	 4.069526e-03	 2.967181e-02	 2.005114e-01	4.346078e-01		13	 0	 TRUE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5501360	0.5062177	U	0.4686274	0.6162291
13773	129	184000	184001	1	  90	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.419458	3.163189	1.0619968	-	-	-	paREP1	1.599937	3.363366	1.0635383	2445	Uncharacterized conserved protein	S	paREP11	 0.000000e+00	 0	3.257295e-02	-4.743809e-03	 1.871726e-02	-1.956463e-01	1.189322e+00		 0	 0	FALSE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4652432	0.4286704	U	0.4686274	0.6162291
13773	129	184001	184002	1	  47	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.599937	3.363366	1.0635383	2445	Uncharacterized conserved protein	S	paREP11	1.484258	3.158576	1.0622991	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.338165e-02	 4.881981e-03	 2.452674e-02	 3.481840e-01	2.127454e-01		 0	 0	 TRUE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6120157	0.5756211	U	0.4686274	0.6162291
13773	129	184002	184003	1	 312	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.484258	3.158576	1.0622991	-	-	-	conserved within P. aerophilum	1.615402	3.263455	1.0107660	-	-	-	hypothetical protein	 0.000000e+00	 0	1.719860e-02	 5.390225e-03	 1.493287e-01	 3.583884e-01	2.367498e-01		 0	 0	 TRUE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6153315	0.5679532	U	0.4686274	0.6162291
13773	129	184003	184004	1	  61	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.615402	3.263455	1.0107660	-	-	-	hypothetical protein	1.445123	3.153118	1.0653918	-	-	-	hypothetical protein	 0.000000e+00	 0	2.899488e-02	-1.028329e-03	-5.949602e-02	 3.140165e-02	7.296280e-01		 0	 0	FALSE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174026	0.4617333	U	0.4686274	0.6162291
13773	129	184004	184005	1	  41	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.445123	3.153118	1.0653918	-	-	-	hypothetical protein	1.411964	3.112881	1.0705154	136	Aspartate-semialdehyde dehydrogenase	E	aspartate-semialdehyde dehydrogenase (asd)	 0.000000e+00	 0	1.099483e-03	 2.472146e-04	 2.747628e-02	-1.037690e-02	1.083991e-01		 0	60	FALSE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184455	0.6034335	U	0.4686274	0.6162291
13773	129	184005	184006	1	  13	Same	-	-	 0.000000	0	  0.000000	 -0.06317890	1.411964	3.112881	1.0705154	136	Aspartate-semialdehyde dehydrogenase	E	aspartate-semialdehyde dehydrogenase (asd)	1.413216	3.144748	1.0880329	527	Aspartokinases	E	aspartate kinase	 2.855583e-03	 1	1.566214e-06	 1.505256e-03	 3.809092e-02	 8.324081e-02	1.154429e-04	E	60	 1	 TRUE	FALSE	118	 TRUE	0.4469764	0.3037120	0.5480306	0.4469764	0.6329203	0.5112366	0.5176918	0.6549470	Y	1.4497162	0.6603634
13773	129	184006	184007	1	  -3	Same	-	-	 2.793208	0	  2.793208	  2.79320801	1.413216	3.144748	1.0880329	527	Aspartokinases	E	aspartate kinase	1.414485	3.083992	1.0488236	498	Threonine synthase	E	threonine synthase	 1.145043e-02	 1	1.610623e-06	 1.409028e-03	 3.697045e-02	 7.498193e-02	3.392608e-04	E	 1	32	 TRUE	FALSE	117	 TRUE	2.9180123	1.7201207	0.5480306	2.9337967	0.6329203	0.6079966	0.5178783	0.6537679	Y	1.4497162	0.8968985
13773	129	184007	184008	1	 468	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.414485	3.083992	1.0488236	498	Threonine synthase	E	threonine synthase	1.346657	3.093543	1.0665340	-	-	-	hypothetical protein	 0.000000e+00	 0	4.600684e-03	 3.865585e-03	 9.033347e-02	 2.123472e-01	2.886073e-01		32	 0	 TRUE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5541521	0.5474398	U	0.4686274	0.6162291
13773	129	184008	184009	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.346657	3.093543	1.0665340	-	-	-	hypothetical protein	1.392955	3.046548	1.0515282	2	Acetylglutamate semialdehyde dehydrogenase	E	N-acetyl-gamma-glutamyl-phosphate reductase (argC)	 0.000000e+00	 0	2.143562e-03	 6.120525e-03	 7.311531e-02	 3.797630e-01	1.078944e-01		 0	49	FALSE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6244243	0.6036927	U	0.4686274	0.6162291
13773	129	184009	184010	1	  -3	Same	+	+	37.124095	0	 92.602801	 89.99264495	1.392955	3.046548	1.0515282	2	Acetylglutamate semialdehyde dehydrogenase	E	N-acetyl-gamma-glutamyl-phosphate reductase (argC)	1.479696	3.288972	1.1109807	548	Acetylglutamate kinase	E	acetylglutamate kinase (argB)	 2.815304e-01	48	7.523935e-03	-1.653962e-03	-5.238878e-03	-1.715293e-01	6.985008e-01	E	49	48	FALSE	FALSE	118	 TRUE	2.1201031	2.0742575	0.5480306	2.0542348	0.7718122	1.2134042	0.4727681	0.4650492	Y	1.4497162	0.9378107
13773	129	184010	184011	1	  71	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.479696	3.288972	1.1109807	548	Acetylglutamate kinase	E	acetylglutamate kinase (argB)	1.493542	3.071060	1.0267087	-	-	-	hypothetical protein	 0.000000e+00	 0	1.917160e-04	 1.192952e-03	 3.716330e-02	 1.668032e-01	9.650084e-03		48	 0	FALSE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5374817	0.6430012	U	0.4686274	0.6162291
13773	129	184011	184012	1	 244	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.493542	3.071060	1.0267087	-	-	-	hypothetical protein	1.392024	2.994696	1.0473833	137	Argininosuccinate synthase	E	argininosuccinate synthase (argG)	 0.000000e+00	 0	1.030594e-02	-2.502356e-03	-4.081196e-03	-2.226399e-01	8.910896e-01		 0	48	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4589246	0.4474444	U	0.4686274	0.6162291
13773	129	184012	184013	1	  49	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.392024	2.994696	1.0473833	137	Argininosuccinate synthase	E	argininosuccinate synthase (argG)	1.350950	2.754359	1.0419643	-	-	-	hypothetical protein	 0.000000e+00	 0	1.687104e-03	 5.963216e-03	 1.071311e-01	 3.725507e-01	8.238618e-02		48	 0	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6218293	0.6134641	U	0.4686274	0.6162291
13773	129	184013	184014	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.350950	2.754359	1.0419643	-	-	-	hypothetical protein	1.390523	3.100962	1.0777570	165	Argininosuccinate lyase	E	argininosuccinate lyase (argH)	 0.000000e+00	 0	1.566041e-03	 6.113996e-03	 7.601279e-02	 3.843777e-01	7.381042e-02		 0	52	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6273431	0.6167268	U	0.4686274	0.6162291
13773	129	184014	184015	1	 254	Convergent	+	-	 0.000000	0	  0.000000	 -0.18866795	1.390523	3.100962	1.0777570	165	Argininosuccinate lyase	E	argininosuccinate lyase (argH)	1.578354	3.864240	1.2551062	3371	Predicted membrane protein	S	conserved hypothetical protein	 1.466307e-02	 3	3.528065e-02	-7.728149e-03	-3.809650e-02	-4.100285e-01	1.744508e+00		52	 3	FALSE	FALSE	123	FALSE	0.4469764	0.2739982	0.5480306	0.4469764	0.7136133	0.6368474	0.4173932	0.4116236	U	0.4686274	0.5489586
13773	129	184015	184016	1	 114	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.578354	3.864240	1.2551062	3371	Predicted membrane protein	S	conserved hypothetical protein	1.423054	3.100155	1.0850778	3842	ABC-type spermidine/putrescine transport systems, ATPase components	E	spermidine/putrescine transport ATP-binding protein	 2.897430e-03	 3	2.411805e-02	-3.597900e-03	-6.022535e-02	-1.570724e-01	1.026264e+00		 3	 5	 TRUE	FALSE	122	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5139075	0.4752422	0.4372640	U	0.4686274	0.6162291
13773	129	184016	184017	1	  -3	Same	+	+	 2.197225	0	  2.197225	  2.19722458	1.423054	3.100155	1.0850778	3842	ABC-type spermidine/putrescine transport systems, ATPase components	E	spermidine/putrescine transport ATP-binding protein	1.387247	3.531590	1.1708449	1176	ABC-type spermidine/putrescine transport system, permease component I	E	spermidine/putrescine transport permease protein	 2.654237e-03	 5	1.282182e-03	 1.817808e-03	 5.040198e-02	 1.009018e-01	1.135116e-01	E	 5	 8	FALSE	FALSE	123	 TRUE	2.9321590	1.6745314	0.5480306	2.9469979	0.7448207	0.5079489	0.5188027	0.6022559	Y	1.4497162	0.8912321
13773	129	184017	184018	1	  -3	Same	+	+	13.161584	0	 15.464169	 15.46416918	1.387247	3.531590	1.1708449	1176	ABC-type spermidine/putrescine transport system, permease component I	E	spermidine/putrescine transport permease protein	1.390117	3.323418	1.1061455	1177	ABC-type spermidine/putrescine transport system, permease component II	E	spermidine/putrescine transport permease protein	 5.151514e-02	 8	8.239465e-06	 3.930596e-03	 6.578106e-02	 2.650192e-01	6.808775e-04	E	 8	32	FALSE	FALSE	124	 TRUE	2.6120441	1.8821254	0.5480306	2.6658834	0.7652913	0.8479017	0.5755793	0.6526075	Y	1.4497162	0.9174032
13773	129	184018	184019	1	 251	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.390117	3.323418	1.1061455	1177	ABC-type spermidine/putrescine transport system, permease component II	E	spermidine/putrescine transport permease protein	1.526956	3.330181	1.1198169	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein, authentic frameshift	 0.000000e+00	 0	1.872491e-02	-4.630194e-03	-2.843482e-02	-3.320444e-01	1.353660e+00	0	32	 0	FALSE	FALSE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4318211	0.4222073	N	0.5492530	0.6245624
13773	129	184019	184020	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.526956	3.330181	1.1198169	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein, authentic frameshift	1.440283	3.282476	1.1112256	1651	Protein-disulfide isomerase	O	conserved within P. aerophilum	 0.000000e+00	 0	7.512209e-03	-8.394838e-04	-3.264482e-03	-5.077132e-03	4.478619e-01	0	 0	 0	 TRUE	FALSE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196517	0.5041686	N	0.5492530	0.6245624
13773	129	184020	184021	1	  30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.440283	3.282476	1.1112256	1651	Protein-disulfide isomerase	O	conserved within P. aerophilum	1.489787	3.110652	1.0028848	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	2.450581e-03	-4.265411e-04	 1.918044e-02	-3.404388e-03	2.036413e-01		 0	 1	 TRUE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198214	0.5784676	U	0.4686274	0.6162291
13773	129	184021	184022	1	  21	Same	-	-	 0.000000	0	  0.000000	 -0.07232066	1.489787	3.110652	1.0028848	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.369052	3.081574	1.0822005	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	conserved hypothetical protein	 5.285113e-02	 1	1.457683e-02	-3.161368e-03	-2.751422e-03	-2.961817e-01	1.234947e+00		 1	 2	 TRUE	FALSE	122	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.8555544	0.4414942	0.4269687	U	0.4686274	0.5573725
13773	129	184022	184023	1	   0	Same	-	-	 2.856470	0	  5.519058	  5.51905803	1.369052	3.081574	1.0822005	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	conserved hypothetical protein	1.332102	2.971837	1.0434763	714	MoxR-like ATPases	R	conserved hypothetical protein	 9.844621e-02	 2	1.365298e-03	 9.822508e-03	 1.545053e-01	 5.769907e-01	3.860034e-02		 2	 3	 TRUE	FALSE	121	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.6838149	1.0091835	0.7111590	0.6286000	U	0.4686274	0.8613043
13773	129	184023	184024	1	 154	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.332102	2.971837	1.0434763	714	MoxR-like ATPases	R	conserved hypothetical protein	1.459837	3.257854	1.1135292	-	-	-	hypothetical protein	 0.000000e+00	 0	1.631621e-02	-1.007307e-03	-2.699691e-02	-1.565170e-01	1.092611e+00		 3	 0	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4753708	0.4334958	U	0.4686274	0.6162291
13773	129	184024	184025	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.459837	3.257854	1.1135292	-	-	-	hypothetical protein	1.424412	3.140747	1.1118213	433	Predicted ATPase	R	conserved hypothetical protein	 0.000000e+00	 0	1.254894e-03	-2.278256e-04	 1.974142e-02	-3.224862e-02	1.290039e-01		 0	 7	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5115441	0.5983751	U	0.4686274	0.6162291
13773	129	184025	184026	1	  -3	Same	+	+	 2.590267	0	  2.590267	  2.57224866	1.424412	3.140747	1.1118213	433	Predicted ATPase	R	conserved hypothetical protein	1.429858	3.116473	1.0845816	420	DNA repair exonuclease	L	exonuclease sbcD, conjectural	 4.283283e-02	 3	2.964831e-05	 5.810306e-04	 2.686040e-02	 2.118024e-02	3.492148e-03		 7	 3	FALSE	FALSE	122	 TRUE	2.9285866	1.6962575	0.5480306	2.9437919	0.7136133	0.8180840	0.5175729	0.6477695	U	0.4686274	0.8456551
13773	129	184026	184027	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.429858	3.116473	1.0845816	420	DNA repair exonuclease	L	exonuclease sbcD, conjectural	1.402503	3.074619	1.1011732	419	ATPase involved in DNA repair	L	purine NTPase, probable	 0.000000e+00	 0	7.482905e-04	 1.052867e-03	 3.794043e-02	 4.683389e-02	7.548788e-02	L	 3	 0	FALSE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186732	0.6162896	Y	1.4497162	0.7118045
13773	129	184027	184028	1	   3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.402503	3.074619	1.1011732	419	ATPase involved in DNA repair	L	purine NTPase, probable	1.336181	2.793850	0.9735827	1503	Peptide chain release factor 1 (eRF1)	J	peptide chain release factor aRF subunit 1	 0.000000e+00	 0	4.398622e-03	 5.632757e-03	 1.142365e-01	 3.347868e-01	2.085187e-01	0	 0	11	FALSE	FALSE	124	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6067323	0.5767479	N	0.5492530	0.6245624
13773	129	184028	184029	1	  79	Divergent	-	+	 0.000000	0	  0.000000	 -1.10093594	1.336181	2.793850	0.9735827	1503	Peptide chain release factor 1 (eRF1)	J	peptide chain release factor aRF subunit 1	1.439074	3.240760	1.0994271	51	Ribosomal protein S10	J	ribosomal protein S10	 1.606241e-02	11	1.058711e-02	 1.419260e-03	 4.008297e-03	 1.957817e-02	6.844610e-01	J	11	67	 TRUE	FALSE	123	FALSE	0.4469764	0.2074628	0.5480306	0.4469764	0.7764261	0.6483817	0.5176936	0.4662178	Y	1.4497162	0.6323429
13773	129	184029	184030	1	  32	Same	+	+	 2.197225	0	  2.197225	 -5.31061904	1.439074	3.240760	1.0994271	51	Ribosomal protein S10	J	ribosomal protein S10	1.410878	3.226738	1.1161360	496	Predicted acid phosphatase	R	surE stationary-phase survival protein homolog	 4.148562e-04	35	7.950443e-04	 4.990920e-04	 3.035640e-02	 7.085603e-03	8.106978e-02		67	35	FALSE	FALSE	124	 TRUE	2.9321590	0.1818499	0.5480306	2.9469979	0.7746280	0.4539905	0.5192523	0.6140495	U	0.4686274	0.4429849
13773	129	184030	184031	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.410878	3.226738	1.1161360	496	Predicted acid phosphatase	R	surE stationary-phase survival protein homolog	1.436785	3.288570	1.1154269	-	-	-	hypothetical protein	 0.000000e+00	 0	6.711952e-04	 5.918350e-04	 2.403094e-02	 1.393502e-02	6.889114e-02		35	 0	FALSE	FALSE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182553	0.6181692	U	0.4686274	0.6162291
13773	129	184031	184032	1	 -28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.436785	3.288570	1.1154269	-	-	-	hypothetical protein	1.547601	3.499513	1.1277944	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	 0.000000e+00	 0	1.228009e-02	-1.405379e-03	 2.726927e-02	-3.336064e-02	6.115888e-01		 0	 0	FALSE	FALSE	126	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5111485	0.4754795	U	0.4686274	0.6162291
13773	129	184032	184033	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.547601	3.499513	1.1277944	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein	1.459768	3.216440	1.0727610	1590	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	7.714569e-03	 8.057588e-04	 6.831427e-03	 1.328771e-01	3.095902e-01		 0	 1	 TRUE	FALSE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5254116	0.5385067	U	0.4686274	0.6162291
13773	129	184033	184034	1	  19	Same	-	-	 0.000000	0	  0.000000	 -0.18221272	1.459768	3.216440	1.0727610	1590	Uncharacterized conserved protein	S	conserved hypothetical protein	1.393286	3.115313	1.0774654	329	Dihydrodipicolinate synthase/N-acetylneuraminate lyase	EM	dihydrodipicolinate synthase	 3.554731e-03	 1	4.419865e-03	-4.866562e-04	 2.344386e-02	-8.498600e-02	4.245478e-01		 1	57	 TRUE	FALSE	124	 TRUE	0.4469764	0.2749489	0.5480306	0.4469764	0.6329203	0.5281729	0.4967286	0.5079521	U	0.4686274	0.5492585
13773	129	184034	184035	1	  80	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.393286	3.115313	1.0774654	329	Dihydrodipicolinate synthase/N-acetylneuraminate lyase	EM	dihydrodipicolinate synthase	1.682216	4.070810	1.1843317	-	-	-	hypothetical protein	 0.000000e+00	 0	8.348071e-02	-1.341243e-02	-9.354955e-03	-4.520532e-01	2.046459e+00		57	 0	 TRUE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4117447	0.4077159	U	0.4686274	0.6162291
13773	129	184035	184036	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.682216	4.070810	1.1843317	-	-	-	hypothetical protein	1.446718	3.116932	1.0913809	312	Predicted Zn-dependent proteases and their inactivated homologs	R	tldD, putative modulator of DNA gyrase	 0.000000e+00	 0	5.545954e-02	-1.079119e-03	-1.271278e-01	 4.859204e-02	8.256853e-01		 0	32	FALSE	FALSE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187537	0.4524920	U	0.4686274	0.6162291
13773	129	184036	184037	1	  -3	Same	+	+	10.604603	0	 18.801489	 18.16351238	1.446718	3.116932	1.0913809	312	Predicted Zn-dependent proteases and their inactivated homologs	R	tldD, putative modulator of DNA gyrase	1.444788	3.180642	1.1006746	312	Predicted Zn-dependent proteases and their inactivated homologs	R	pmbA, putative modulator of DNA gyrase	 6.311121e-02	 9	3.725602e-06	 3.088018e-05	 2.115404e-02	 1.632692e-03	3.392608e-04		32	 9	FALSE	FALSE	125	 TRUE	2.6607417	1.9027798	0.5480306	2.6109649	0.7702221	0.9015300	0.5198288	0.6537679	U	0.4686274	0.8805094
13773	129	184037	184038	1	 134	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.444788	3.180642	1.1006746	312	Predicted Zn-dependent proteases and their inactivated homologs	R	pmbA, putative modulator of DNA gyrase	1.371453	3.158600	0.9895597	-	-	-	paREP10	 0.000000e+00	 0	5.377976e-03	 5.280247e-04	 4.302917e-02	-2.097762e-02	4.665425e-01		 9	 0	FALSE	FALSE	126	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5150132	0.5000023	U	0.4686274	0.6162291
13773	129	184038	184039	1	 268	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.371453	3.158600	0.9895597	-	-	-	paREP10	1.495788	3.340149	1.1324082	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.545925e-02	-3.548957e-03	-3.198096e-02	-3.116676e-01	1.276224e+00		 0	 0	 TRUE	FALSE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4372279	0.4252479	U	0.4686274	0.6162291
13773	129	184039	184040	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.495788	3.340149	1.1324082	-	-	-	conserved within P. aerophilum	1.805149	3.913451	1.0885881	-	-	-	hypothetical protein	 0.000000e+00	 0	9.570384e-02	 1.570509e-02	 5.171627e-01	 4.748520e-01	2.628234e-01		 0	 0	 TRUE	FALSE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6644919	0.5561071	U	0.4686274	0.6162291
13773	129	184040	184041	1	 149	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.805149	3.913451	1.0885881	-	-	-	hypothetical protein	1.451907	3.652962	1.1956527	477	Permeases of the major facilitator superfamily	GEPR	resistance protein, conjectural	 0.000000e+00	 0	1.247797e-01	 1.817935e-04	-2.949380e-01	 9.968848e-02	7.939179e-01		 0	22	 TRUE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186513	0.4559908	U	0.4686274	0.6162291
13773	129	184041	184042	1	 -11	Convergent	+	-	 0.000000	0	  0.000000	 -0.44206673	1.451907	3.652962	1.1956527	477	Permeases of the major facilitator superfamily	GEPR	resistance protein, conjectural	1.303350	2.774003	0.9709828	852	NADH:ubiquinone oxidoreductase 27 kD subunit	C	NADH-ubiquinone oxidoreductase subunit	 9.712855e-03	11	2.206910e-02	-7.607857e-05	 7.550510e-02	-9.428740e-02	1.078218e+00		22	11	FALSE	FALSE	124	FALSE	0.4469764	0.2371052	0.5480306	0.4469764	0.7764261	0.5957827	0.4939051	0.4344863	U	0.4686274	0.5372951
13773	129	184042	184043	1	   3	Same	-	-	 2.512306	0	  2.512306	  2.45514721	1.303350	2.774003	0.9709828	852	NADH:ubiquinone oxidoreductase 27 kD subunit	C	NADH-ubiquinone oxidoreductase subunit	1.413580	3.100660	1.0461958	377	NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases	C	NADH-ubiquinone oxidoreductase subunit	 6.552761e-03	 7	1.215066e-02	 5.597917e-03	 3.416351e-02	 2.583907e-01	4.386648e-01	C	11	 7	 TRUE	FALSE	123	 TRUE	2.9301853	1.6848950	0.5480306	2.9452541	0.7596462	0.5650491	0.5729220	0.5058537	Y	1.4497162	0.8925290
13773	129	184043	184044	1	  97	Same	-	-	 0.000000	0	  0.000000	 -0.24393432	1.413580	3.100660	1.0461958	377	NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases	C	NADH-ubiquinone oxidoreductase subunit	1.422267	3.119668	1.0542917	656	Aldo/keto reductases, related to diketogulonate reductase	R	aldo-keto reductase, putative	 1.069412e-03	 7	7.546543e-05	 1.101326e-03	 3.213798e-02	 5.539964e-02	5.541848e-03		 7	37	 TRUE	FALSE	122	 TRUE	0.4469764	0.2667406	0.5480306	0.4469764	0.7596462	0.4722688	0.5187206	0.6460120	U	0.4686274	0.5466680
13773	129	184044	184045	1	 458	Same	-	-	 1.504077	0	  4.512232	 -2.63225122	1.422267	3.119668	1.0542917	656	Aldo/keto reductases, related to diketogulonate reductase	R	aldo-keto reductase, putative	1.644299	3.550234	1.0730074	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	 1.009877e-01	37	4.929795e-02	-5.618520e-03	 4.739184e-02	-1.868773e-01	1.277958e+00		37	44	 TRUE	FALSE	121	 TRUE	2.9322497	0.1931314	0.5480306	2.9011386	0.7740003	1.0165791	0.4681846	0.4250355	U	0.4686274	0.4465317
13773	129	184045	184046	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.05918887	1.644299	3.550234	1.0730074	1064	Zn-dependent alcohol dehydrogenases	R	alcohol dehydrogenase (Zinc)	1.538571	3.339879	1.0706312	3255	Putative sterol carrier protein	I	conserved hypothetical protein	 5.865798e-03	 3	1.117821e-02	 1.681726e-02	 1.421686e-01	 6.583503e-01	4.885355e-02		44	 3	 TRUE	FALSE	120	 TRUE	0.4469764	0.3056289	0.5480306	0.4469764	0.7136133	0.5528145	0.7383057	0.6242586	U	0.4686274	0.5589164
13773	129	184046	184047	1	 295	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.538571	3.339879	1.0706312	3255	Putative sterol carrier protein	I	conserved hypothetical protein	1.354981	3.116537	1.0811941	-	-	-	hypothetical protein	 0.000000e+00	 0	3.370535e-02	-8.405026e-03	-7.323159e-02	-5.316817e-01	2.128509e+00		 3	 0	 TRUE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4005164	0.4069224	U	0.4686274	0.6162291
13773	129	184047	184048	1	  57	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.354981	3.116537	1.0811941	-	-	-	hypothetical protein	1.391799	2.961679	1.0441961	1818	Predicted RNA-binding protein, contains THUMP domain	R	conserved hypothetical protein	 0.000000e+00	 0	1.355576e-03	 5.745489e-03	 7.332909e-02	 3.646311e-01	7.010506e-02		 0	 0	 TRUE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6172891	0.6177812	U	0.4686274	0.6162291
13773	129	184048	184049	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.391799	2.961679	1.0441961	1818	Predicted RNA-binding protein, contains THUMP domain	R	conserved hypothetical protein	1.369653	3.122999	1.0892480	596	Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)	R	conserved hypothetical protein	 0.000000e+00	 0	4.904824e-04	 4.871176e-03	 8.564174e-02	 3.206368e-01	3.035029e-02		 0	 4	FALSE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5997525	0.6329638	U	0.4686274	0.6162291
13773	129	184049	184050	1	 -17	Convergent	+	-	 0.000000	0	  0.000000	 -0.40338394	1.369653	3.122999	1.0892480	596	Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)	R	conserved hypothetical protein	1.380155	2.990639	1.0509222	294	Dihydropteroate synthase and related enzymes	H	dihydropteroate synthase	 2.651336e-03	 4	1.102971e-04	 5.823008e-03	 8.474192e-02	 3.834471e-01	6.248642e-03		 4	48	FALSE	FALSE	120	FALSE	0.4469764	0.2417643	0.5480306	0.4469764	0.7323301	0.5072982	0.6267563	0.6452751	U	0.4686274	0.5387705
13773	129	184050	184051	1	  87	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.380155	2.990639	1.0509222	294	Dihydropteroate synthase and related enzymes	H	dihydropteroate synthase	1.619779	3.406069	1.0721761	-	-	-	hypothetical protein	 0.000000e+00	 0	5.741955e-02	-1.199546e-02	-6.039959e-02	-5.198830e-01	2.178059e+00		48	 0	 TRUE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4030241	0.4060318	U	0.4686274	0.6162291
13773	129	184051	184052	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.619779	3.406069	1.0721761	-	-	-	hypothetical protein	1.415863	3.014596	1.0602228	621	2-methylthioadenine synthetase	J	conserved hypothetical protein	 0.000000e+00	 0	4.158151e-02	-5.982688e-03	-1.180125e-01	-2.286936e-01	1.323471e+00		 0	58	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4573935	0.4233169	U	0.4686274	0.6162291
13773	129	184052	184053	1	 109	Convergent	+	-	 0.000000	0	  0.000000	-12.44561265	1.415863	3.014596	1.0602228	621	2-methylthioadenine synthetase	J	conserved hypothetical protein	1.344753	2.830463	0.9963319	143	Methionyl-tRNA synthetase	J	methionyl-tRNA synthetase alpha subunit	 3.957376e-04	58	5.056710e-03	 3.788889e-03	 9.071230e-02	 2.071187e-01	3.078845e-01	J	58	66	FALSE	FALSE	121	FALSE	0.4469764	0.1771744	0.5480306	0.4469764	0.7709797	0.4526705	0.5524530	0.5393143	Y	1.4497162	0.6233262
13773	129	184053	184054	1	  23	Same	-	-	 0.000000	0	  0.000000	 -0.41586382	1.344753	2.830463	0.9963319	143	Methionyl-tRNA synthetase	J	methionyl-tRNA synthetase alpha subunit	1.444740	3.357966	1.1418691	-	-	-	conserved hypothetical protein	 3.137307e-03	 2	9.997570e-03	 7.094076e-04	 2.650360e-04	-2.487912e-02	7.075095e-01		66	 2	 TRUE	FALSE	120	 TRUE	0.4469764	0.2407184	0.5480306	0.4469764	0.6838149	0.5183257	0.5137976	0.4639635	U	0.4686274	0.5384394
13773	129	184054	184055	1	   0	Same	-	-	 0.000000	0	  0.000000	 -0.41586382	1.444740	3.357966	1.1418691	-	-	-	conserved hypothetical protein	1.370909	2.942435	1.0188536	20	Undecaprenyl pyrophosphate synthase	I	conserved hypothetical protein	 3.137307e-03	 2	5.451116e-03	 5.354077e-04	 4.333557e-02	-2.014361e-02	4.717992e-01		 2	66	 TRUE	FALSE	119	 TRUE	0.4469764	0.2407184	0.5480306	0.4469764	0.6838149	0.5183257	0.5154929	0.4985726	U	0.4686274	0.5384394
13773	129	184055	184056	1	 -22	Same	-	-	 0.000000	0	  0.000000	 -0.89579163	1.370909	2.942435	1.0188536	20	Undecaprenyl pyrophosphate synthase	I	conserved hypothetical protein	1.401440	3.104437	1.0664649	73	EMAP domain	R	methionyl-tRNA synthetase beta subunit	 1.313629e-02	 8	9.321310e-04	 4.020435e-03	 5.763251e-02	 2.653920e-01	6.336637e-02		66	 8	 TRUE	FALSE	118	 TRUE	0.4469764	0.2159734	0.5480306	0.4469764	0.7652913	0.6256402	0.5758045	0.6195004	U	0.4686274	0.5305951
13773	129	184056	184057	1	  46	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.401440	3.104437	1.0664649	73	EMAP domain	R	methionyl-tRNA synthetase beta subunit	1.554912	3.301215	1.0686863	-	-	-	hypothetical protein	 0.000000e+00	 0	2.355376e-02	-5.171113e-03	-1.884738e-02	-3.082273e-01	1.360813e+00		 8	 0	 TRUE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4379815	0.4217615	U	0.4686274	0.6162291
13773	129	184057	184058	1	 141	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.554912	3.301215	1.0686863	-	-	-	hypothetical protein	1.413447	2.937350	0.9616685	-	-	-	hypothetical protein	 0.000000e+00	 0	2.001226e-02	-3.928091e-03	-4.874803e-02	-2.128932e-01	1.084603e+00		 0	 0	FALSE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4608792	0.4341358	U	0.4686274	0.6162291
13773	129	184058	184059	1	   6	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.413447	2.937350	0.9616685	-	-	-	hypothetical protein	1.459098	3.296581	1.1564411	-	-	-	hypothetical protein	 0.000000e+00	 0	2.083992e-03	-2.923787e-04	 1.381334e-02	-4.759546e-02	2.022583e-01		 0	 0	 TRUE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5069804	0.5792906	U	0.4686274	0.6162291
13773	129	184059	184060	1	 -34	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.459098	3.296581	1.1564411	-	-	-	hypothetical protein	1.375811	2.996996	1.0404782	1011	Predicted hydrolase (HAD superfamily)	R	conserved hypothetical protein	 0.000000e+00	 0	6.936800e-03	-5.823776e-04	 2.828499e-02	-1.063052e-01	6.309455e-01		 0	 3	 TRUE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4889630	0.4730477	U	0.4686274	0.6162291
13773	129	184060	184061	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.375811	2.996996	1.0404782	1011	Predicted hydrolase (HAD superfamily)	R	conserved hypothetical protein	1.475464	3.427662	1.1466969	455	ATPases involved in chromosome partitioning	D	hypothetical protein	 0.000000e+00	 0	9.930812e-03	-1.819357e-03	-1.357068e-02	-2.015969e-01	8.968948e-01		 3	 0	FALSE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4639547	0.4466307	U	0.4686274	0.6162291
13773	129	184061	184062	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.475464	3.427662	1.1466969	455	ATPases involved in chromosome partitioning	D	hypothetical protein	1.446215	3.351671	1.1225509	-	-	-	hypothetical protein	 0.000000e+00	 0	8.554880e-04	-1.246289e-04	 1.787712e-02	 1.388613e-02	7.846878e-02		 0	 0	 TRUE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182761	0.6152238	U	0.4686274	0.6162291
13773	129	184062	184063	1	  41	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.446215	3.351671	1.1225509	-	-	-	hypothetical protein	1.540562	3.411667	1.0933600	-	-	-	hypothetical protein	 0.000000e+00	 0	8.901311e-03	-4.616743e-04	 3.546362e-02	 3.080676e-02	4.540464e-01		 0	 0	 TRUE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173943	0.5029866	U	0.4686274	0.6162291
13773	129	184063	184064	1	  48	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.540562	3.411667	1.0933600	-	-	-	hypothetical protein	1.422021	3.011554	1.0556592	-	-	-	hypothetical protein	 0.000000e+00	 0	1.405194e-02	-2.619048e-03	-2.788616e-02	-1.474324e-01	8.509815e-01		 0	 0	 TRUE	FALSE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4776600	0.4503392	U	0.4686274	0.6162291
13773	129	184064	184065	1	 301	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.422021	3.011554	1.0556592	-	-	-	hypothetical protein	1.397506	3.044862	1.0667490	834	ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	ET	bacterial extracellular solute-binding proteins, family 3	 0.000000e+00	 0	6.009761e-04	 1.582734e-03	 4.442674e-02	 9.155329e-02	5.733507e-02		 0	15	FALSE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178651	0.6213153	U	0.4686274	0.6162291
13773	129	184065	184066	1	 -15	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.397506	3.044862	1.0667490	834	ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	ET	bacterial extracellular solute-binding proteins, family 3	1.319822	3.086279	1.0415209	1430	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	6.034800e-03	 7.089865e-03	 1.402212e-01	 3.993500e-01	2.043345e-01		15	 0	FALSE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6345043	0.5782742	U	0.4686274	0.6162291
13773	129	184066	184067	1	 549	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.319822	3.086279	1.0415209	1430	Uncharacterized conserved protein	S	conserved hypothetical protein	1.343544	3.417032	1.1757412	-	-	-	hypothetical protein	 0.000000e+00	 0	5.627018e-04	 1.418975e-02	 1.722255e-01	 7.319121e-01	6.617941e-03		 0	 0	FALSE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7626112	0.6448898	U	0.4686274	0.6162291
13773	129	184067	184068	1	 -39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.343544	3.417032	1.1757412	-	-	-	hypothetical protein	1.401716	3.041203	1.0587861	846	NAD-dependent protein deacetylases, SIR2 family	K	conserved hypothetical protein	 0.000000e+00	 0	3.384020e-03	 5.357595e-03	 6.010903e-02	 3.268247e-01	1.723875e-01		 0	17	FALSE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6023599	0.5871112	U	0.4686274	0.6162291
13773	129	184068	184069	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.401716	3.041203	1.0587861	846	NAD-dependent protein deacetylases, SIR2 family	K	conserved hypothetical protein	1.428818	3.040000	1.0470165	1547	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	7.344891e-04	 1.121468e-03	 2.887751e-02	 5.195991e-02	7.339400e-02		17	 0	FALSE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187833	0.6168603	U	0.4686274	0.6162291
13773	129	184069	184070	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.428818	3.040000	1.0470165	1547	Uncharacterized conserved protein	S	conserved hypothetical protein	1.429222	3.073190	1.0781032	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 0.000000e+00	 0	1.633435e-07	 5.005206e-04	 2.654399e-02	 1.622503e-02	2.120380e-05		 0	 9	 TRUE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180551	0.6555893	U	0.4686274	0.6162291
13773	129	184070	184071	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.429222	3.073190	1.0781032	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.393036	3.132328	1.0814141	-	-	-	hypothetical protein	 0.000000e+00	 0	1.309441e-03	 1.293850e-03	 4.326592e-02	 5.913975e-02	1.208670e-01		 9	 0	 TRUE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186029	0.6007310	U	0.4686274	0.6162291
13773	129	184071	184072	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.393036	3.132328	1.0814141	-	-	-	hypothetical protein	1.459017	3.411522	1.1444407	-	-	-	hypothetical protein	 0.000000e+00	 0	4.353561e-03	-4.449267e-04	 7.034599e-03	-7.909488e-02	4.096786e-01		 0	 0	 TRUE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4983209	0.5105099	U	0.4686274	0.6162291
13773	129	184072	184073	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.459017	3.411522	1.1444407	-	-	-	hypothetical protein	1.388629	3.073390	1.1094301	-	-	-	hypothetical protein	 0.000000e+00	 0	4.954500e-03	-4.785240e-04	 2.499898e-02	-8.564332e-02	4.613151e-01		 0	 0	 TRUE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4964384	0.5017230	U	0.4686274	0.6162291
13773	129	184073	184074	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.388629	3.073390	1.1094301	-	-	-	hypothetical protein	1.371111	2.915413	1.0100036	-	-	-	hypothetical protein	 0.000000e+00	 0	3.068648e-04	 5.038797e-03	 8.601624e-02	 3.339304e-01	1.972483e-02		 0	 0	 TRUE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6057974	0.6377141	U	0.4686274	0.6162291
13773	129	184074	184075	1	  74	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.371111	2.915413	1.0100036	-	-	-	hypothetical protein	1.350468	2.958310	1.0301704	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar-phosphate nucleotidyl transferase, putative	 0.000000e+00	 0	4.261517e-04	 8.102422e-03	 1.249731e-01	 5.056517e-01	1.507826e-02		 0	20	 TRUE	FALSE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6742724	0.6403514	U	0.4686274	0.6162291
13773	129	184075	184076	1	 -10	Same	+	+	 0.000000	0	  0.000000	 -1.13595021	1.350468	2.958310	1.0301704	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar-phosphate nucleotidyl transferase, putative	1.399440	2.948491	1.0473882	8	Glutamyl- and glutaminyl-tRNA synthetases	J	glutamyl-tRNA synthetase	 2.482542e-03	15	2.398264e-03	 5.243354e-03	 6.303178e-02	 3.313506e-01	1.208670e-01		20	15	FALSE	FALSE	114	 TRUE	0.4469764	0.2059203	0.5480306	0.4469764	0.7783720	0.5053594	0.6044688	0.6007310	U	0.4686274	0.5274037
13773	129	184076	184077	1	  -7	Same	+	+	 0.000000	0	  0.000000	 -0.32561061	1.399440	2.948491	1.0473882	8	Glutamyl- and glutaminyl-tRNA synthetases	J	glutamyl-tRNA synthetase	1.506709	3.317769	1.1380589	1817	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 9.273304e-02	 4	1.150659e-02	-2.873819e-03	-1.194774e-02	-2.345700e-01	9.529835e-01		15	 4	FALSE	FALSE	115	 TRUE	0.4469764	0.2506458	0.5480306	0.4469764	0.7323301	0.9837346	0.4556806	0.4424150	U	0.4686274	0.5415813
13773	129	184077	184078	1	  29	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.506709	3.317769	1.1380589	1817	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.404127	3.179855	1.0856347	-	-	-	hypothetical protein	 0.000000e+00	 0	1.052304e-02	-2.614559e-03	-1.192949e-02	-2.050908e-01	8.509815e-01		 4	 0	FALSE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4629404	0.4503392	U	0.4686274	0.6162291
13773	129	184078	184079	1	 -34	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.404127	3.179855	1.0856347	-	-	-	hypothetical protein	1.371930	2.992618	1.0268345	1936	Predicted nucleotide kinase (related to CMP and AMP kinases)	F	conserved hypothetical protein	 0.000000e+00	 0	1.036662e-03	 3.755917e-03	 7.501497e-02	 2.406590e-01	7.297876e-02		 0	 8	FALSE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5654248	0.6169600	U	0.4686274	0.6162291
13773	129	184079	184080	1	 -22	Same	-	-	 0.000000	0	  0.000000	 -0.18221272	1.371930	2.992618	1.0268345	1936	Predicted nucleotide kinase (related to CMP and AMP kinases)	F	conserved hypothetical protein	1.394563	2.955129	1.0165458	17	Aspartyl/asparaginyl-tRNA synthetases	J	asparaginyl-tRNA synthetase	 3.547665e-02	 8	5.122594e-04	 4.515911e-03	 6.570524e-02	 2.999589e-01	3.170203e-02	0	 8	36	 TRUE	FALSE	116	 TRUE	0.4469764	0.2749489	0.5480306	0.4469764	0.7652913	0.7770652	0.5918648	0.6317872	N	0.5492530	0.5580030
13773	129	184080	184081	1	   4	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.394563	2.955129	1.0165458	17	Aspartyl/asparaginyl-tRNA synthetases	J	asparaginyl-tRNA synthetase	1.385286	2.896041	0.9833989	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	8.604965e-05	 3.756839e-03	 6.755975e-02	 2.559840e-01	6.997843e-03		36	 0	 TRUE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5724871	0.6444474	U	0.4686274	0.6162291
13773	129	184081	184082	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.385286	2.896041	0.9833989	-	-	-	conserved hypothetical protein	1.461580	3.166711	1.0879953	2084	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	I	3-hydroxyisobutyrate dehydrogenase, putative	 0.000000e+00	 0	5.820714e-03	-6.734368e-04	 2.029412e-03	-1.079603e-01	5.564725e-01		 0	 1	 TRUE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4884996	0.4830103	U	0.4686274	0.6162291
13773	129	184082	184083	1	  49	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.461580	3.166711	1.0879953	2084	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	I	3-hydroxyisobutyrate dehydrogenase, putative	1.500391	3.286882	1.1211025	9	Putative translation factor (SUA5)	J	sua5 family protein	 1.102807e-02	 1	1.506287e-03	 4.991511e-04	 3.240724e-02	 1.002704e-01	9.852757e-02	0	 1	33	 TRUE	FALSE	113	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.6060889	0.5187254	0.6071648	N	0.5492530	0.5604716
13773	129	184083	184084	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.34265153	1.500391	3.286882	1.1211025	9	Putative translation factor (SUA5)	J	sua5 family protein	1.343799	2.919769	1.0025056	500	SAM-dependent methyltransferases	QR	methyltransferase	 7.130277e-04	 8	2.452102e-02	-5.271890e-03	-1.760116e-02	-4.155738e-01	1.754659e+00		33	 8	FALSE	FALSE	114	 TRUE	0.4469764	0.2494684	0.5480306	0.4469764	0.7652913	0.4603858	0.4165336	0.4113510	U	0.4686274	0.5412088
13773	129	184084	184085	1	  25	Same	+	+	 0.000000	0	  0.000000	 -1.63396634	1.343799	2.919769	1.0025056	500	SAM-dependent methyltransferases	QR	methyltransferase	1.467067	3.232993	1.0780114	462	Phosphoribosylpyrophosphate synthetase	FE	ribose-phosphate pyrophosphokinase	 6.541102e-04	 8	1.519507e-02	-1.686475e-03	-2.775556e-02	-1.968508e-01	1.115188e+00		 8	62	FALSE	FALSE	115	 TRUE	0.4469764	0.2001585	0.5480306	0.4469764	0.7652913	0.4599161	0.4651009	0.4320538	U	0.4686274	0.5255735
13773	129	184085	184086	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	 -1.86225522	1.467067	3.232993	1.0780114	462	Phosphoribosylpyrophosphate synthetase	FE	ribose-phosphate pyrophosphokinase	1.429568	3.005984	1.0488099	123	Deacetylases, including yeast histone deacetylase and acetoin utilization protein	BQ	acetylpolyamine aminohydrolase, putative	 6.363500e-02	22	1.406170e-03	-3.420869e-04	 1.732357e-02	-2.949978e-02	1.323329e-01		62	22	FALSE	FALSE	116	FALSE	0.4469764	0.1980216	0.5480306	0.4469764	0.7773546	0.9031642	0.5123360	0.5978214	U	0.4686274	0.5248946
13773	129	184086	184087	1	  60	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.429568	3.005984	1.0488099	123	Deacetylases, including yeast histone deacetylase and acetoin utilization protein	BQ	acetylpolyamine aminohydrolase, putative	1.305496	2.719957	0.9952022	-	-	-	hypothetical protein	 0.000000e+00	 0	1.539392e-02	 3.184120e-03	 1.108133e-01	 1.135039e-01	6.530823e-01		22	 0	 TRUE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5205246	0.4700463	U	0.4686274	0.6162291
13773	129	184087	184088	1	 -22	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.305496	2.719957	0.9952022	-	-	-	hypothetical protein	1.551535	3.386696	1.0422159	1402	Uncharacterized protein, putative amidase	R	conserved hypothetical protein	 0.000000e+00	 0	6.053508e-02	-1.461040e-02	-1.786795e-01	-6.938731e-01	2.809418e+00		 0	15	FALSE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3881839	0.4018000	U	0.4686274	0.6162291
13773	129	184088	184089	1	  87	Divergent	-	+	 0.000000	0	  0.000000	 -0.15725008	1.551535	3.386696	1.0422159	1402	Uncharacterized protein, putative amidase	R	conserved hypothetical protein	1.522682	3.315424	1.0938136	2429	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.970976e-02	 6	8.325102e-04	 7.139012e-03	 9.164775e-02	 4.734596e-01	1.238361e-02		15	 6	 TRUE	FALSE	115	FALSE	0.4469764	0.2762022	0.5480306	0.4469764	0.7537284	0.6758331	0.6641493	0.6418162	U	0.4686274	0.5496538
13773	129	184089	184090	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.27039274	1.522682	3.315424	1.0938136	2429	Uncharacterized conserved protein	S	conserved hypothetical protein	1.423484	3.120426	1.0611501	1985	Pyrimidine reductase, riboflavin biosynthesis	H	riboflavin specific deaminase, putative	 1.020864e-01	 6	9.840179e-03	-1.989589e-03	-1.345314e-02	-1.198262e-01	6.781263e-01		 6	12	FALSE	FALSE	116	 TRUE	0.4469764	0.2585977	0.5480306	0.4469764	0.7537284	1.0221623	0.4852188	0.4669420	U	0.4686274	0.5440956
13773	129	184090	184091	1	   8	Same	+	+	 0.000000	0	  0.000000	 -0.65114082	1.423484	3.120426	1.0611501	1985	Pyrimidine reductase, riboflavin biosynthesis	H	riboflavin specific deaminase, putative	1.459406	3.147446	1.0773533	108	3,4-dihydroxy-2-butanone 4-phosphate synthase	H	GTP cyclohydrolase II	 1.854570e-01	12	1.290366e-03	-2.236284e-04	 1.630798e-02	-3.332530e-02	1.334520e-01	H	12	13	FALSE	FALSE	117	 TRUE	0.4469764	0.2273367	0.5480306	0.4469764	0.7776747	1.1219429	0.5112145	0.5974546	Y	1.4497162	0.6382099
13773	129	184091	184092	1	 -16	Convergent	+	-	 0.000000	0	  0.000000	 -0.11778304	1.459406	3.147446	1.0773533	108	3,4-dihydroxy-2-butanone 4-phosphate synthase	H	GTP cyclohydrolase II	1.369555	2.799328	0.9277650	727	Predicted Fe-S-cluster oxidoreductase	R	conserved hypothetical protein	 7.654975e-03	 2	8.073174e-03	-6.557530e-04	 2.991566e-02	-1.166386e-01	7.010688e-01		13	 2	FALSE	FALSE	118	FALSE	0.4469764	0.2945188	0.5480306	0.4469764	0.6838149	0.5743751	0.4860455	0.4647282	U	0.4686274	0.5554237
13773	129	184092	184093	1	  53	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.369555	2.799328	0.9277650	727	Predicted Fe-S-cluster oxidoreductase	R	conserved hypothetical protein	1.519910	3.311792	1.1181128	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	 1.523153e-03	 2	2.260662e-02	-5.607291e-03	-4.991069e-02	-4.092492e-01	1.638714e+00		 2	 4	 TRUE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.4836464	0.4176076	0.4137816	U	0.4686274	0.6162291
13773	129	184093	184094	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	 -0.20450080	1.519910	3.311792	1.1181128	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein	1.422487	3.109467	1.0708789	1488	Nicotinic acid phosphoribosyltransferase	H	conserved hypothetical protein	 5.109106e-02	 4	9.491113e-03	-1.980510e-03	-1.221908e-02	-1.231075e-01	6.693073e-01	0	 4	30	FALSE	FALSE	118	FALSE	0.4469764	0.2717439	0.5480306	0.4469764	0.7323301	0.8433483	0.4841488	0.4688853	N	0.5492530	0.5569956
13773	129	184094	184095	1	  32	Divergent	-	+	 0.000000	0	  0.000000	 -1.04300948	1.422487	3.109467	1.0708789	1488	Nicotinic acid phosphoribosyltransferase	H	conserved hypothetical protein	1.461813	3.153437	1.0982007	1199	Rad3-related DNA helicases	KL	conserved hypothetical protein	 7.695582e-03	13	1.546525e-03	-3.012082e-04	 1.536982e-02	-3.981543e-02	1.592641e-01		30	13	 TRUE	FALSE	117	FALSE	0.4469764	0.2089931	0.5480306	0.4469764	0.7781369	0.5761033	0.5091592	0.5901897	U	0.4686274	0.5283794
13773	129	184095	184096	1	 -28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.461813	3.153437	1.0982007	1199	Rad3-related DNA helicases	KL	conserved hypothetical protein	1.496163	3.483385	1.0964711	-	-	-	hypothetical protein	 0.000000e+00	 0	1.179910e-03	 4.665281e-04	 3.100685e-02	 9.623344e-02	7.846878e-02		13	 0	FALSE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181220	0.6152238	U	0.4686274	0.6162291
13773	129	184096	184097	1	  71	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.496163	3.483385	1.0964711	-	-	-	hypothetical protein	1.437054	3.154488	1.1023910	550	Topoisomerase IA	L	DNA topoisomerase (topA)	 0.000000e+00	 0	3.493921e-03	-6.419656e-04	 8.663654e-03	-2.138521e-02	2.755646e-01		 0	12	 TRUE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5148769	0.5521597	U	0.4686274	0.6162291
13773	129	184097	184098	1	  -7	Same	+	+	 0.000000	0	  0.000000	 -0.25208038	1.437054	3.154488	1.1023910	550	Topoisomerase IA	L	DNA topoisomerase (topA)	1.444984	3.111572	1.0584211	1736	Diphthamide synthase subunit DPH2	J	conserved hypothetical protein	 3.671477e-02	 5	6.288137e-05	 9.190379e-05	 2.139443e-02	-1.537275e-03	6.248642e-03	0	12	 5	FALSE	FALSE	118	 TRUE	0.4469764	0.2632714	0.5480306	0.4469764	0.7448207	0.7825692	0.5199781	0.6452751	N	0.5492530	0.5543303
13773	129	184098	184099	1	   7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.444984	3.111572	1.0584211	1736	Diphthamide synthase subunit DPH2	J	conserved hypothetical protein	1.394883	2.910434	1.0198843	-	-	-	hypothetical protein	 0.000000e+00	 0	2.510086e-03	 3.621910e-04	 3.297785e-02	-1.606188e-02	2.496164e-01		 5	 0	FALSE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5168205	0.5628925	U	0.4686274	0.6162291
13773	129	184099	184100	1	  40	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.394883	2.910434	1.0198843	-	-	-	hypothetical protein	1.438378	3.145068	1.0972168	433	Predicted ATPase	R	conserved hypothetical protein	 0.000000e+00	 0	1.891876e-03	 7.354437e-04	 2.165719e-02	 1.499109e-02	1.873568e-01		 0	 2	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181535	0.5834990	U	0.4686274	0.6162291
13773	129	184100	184101	1	  10	Convergent	+	-	 0.000000	0	  0.000000	 -0.13294528	1.438378	3.145068	1.0972168	433	Predicted ATPase	R	conserved hypothetical protein	1.387261	2.961162	1.0291804	5256	Translation elongation factor EF-1alpha (GTPase)	J	translation elongation factor aEF-1 alpha subunit	 3.982039e-03	 2	2.613026e-03	 8.346403e-04	 4.051124e-02	 1.697011e-02	2.442772e-01		 2	64	FALSE	FALSE	121	FALSE	0.4469764	0.2864925	0.5480306	0.4469764	0.6838149	0.5358589	0.5179792	0.5648306	U	0.4686274	0.5528971
13773	129	184101	184102	1	 116	Same	-	-	 0.000000	0	  0.000000	 -6.82012478	1.387261	2.961162	1.0291804	5256	Translation elongation factor EF-1alpha (GTPase)	J	translation elongation factor aEF-1 alpha subunit	1.328587	2.859543	0.9973405	1335	Amidases related to nicotinamidase	Q	isochorismatase, putative	-5.209427e-02	34	3.442579e-03	 7.875790e-03	 1.406777e-01	 4.585969e-01	1.187419e-01	0	64	34	 TRUE	FALSE	120	 TRUE	0.4469764	0.1806899	0.5480306	0.4469764	0.7748967	0.5246260	0.6600740	0.6011648	N	0.5492530	0.5282110
13773	129	184102	184103	1	 328	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.328587	2.859543	0.9973405	1335	Amidases related to nicotinamidase	Q	isochorismatase, putative	1.661157	3.535835	1.1271021	-	-	-	paREP2a	 0.000000e+00	 0	1.106028e-01	-2.576024e-02	-2.070161e-01	-8.189231e-01	3.280463e+00		34	 0	 TRUE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3815301	0.4000911	U	0.4686274	0.6162291
13773	129	184103	184104	1	  79	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.661157	3.535835	1.1271021	-	-	-	paREP2a	1.362811	2.895437	0.9812094	251	Putative translation initiation inhibitor, yjgF family	J	conserved hypothetical protein	 0.000000e+00	 0	8.901018e-02	-1.858122e-02	-2.883336e-01	-6.659612e-01	2.717564e+00		 0	50	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3895986	0.4022795	U	0.4686274	0.6162291
13773	129	184104	184105	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.362811	2.895437	0.9812094	251	Putative translation initiation inhibitor, yjgF family	J	conserved hypothetical protein	1.480643	3.202945	1.0609089	-	-	-	hypothetical protein	 0.000000e+00	 0	1.388440e-02	-2.591063e-03	-2.731164e-02	-2.620354e-01	1.162690e+00		50	 0	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4495190	0.4300663	U	0.4686274	0.6162291
13773	129	184105	184106	1	  39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.480643	3.202945	1.0609089	-	-	-	hypothetical protein	1.360455	3.043622	1.0779861	-	-	-	hypothetical protein	 0.000000e+00	 0	1.444520e-02	-2.659980e-03	 8.464473e-03	-2.662938e-01	1.187648e+00		 0	 0	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4483405	0.4288368	U	0.4686274	0.6162291
13773	129	184106	184107	1	 181	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.360455	3.043622	1.0779861	-	-	-	hypothetical protein	1.670595	3.775329	1.1117028	-	-	-	paREP2a	 0.000000e+00	 0	9.618683e-02	-1.993374e-02	-1.113112e-01	-6.845187e-01	2.791438e+00		 0	 0	FALSE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3886560	0.4019369	U	0.4686274	0.6162291
13773	129	184107	184108	1	   7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.670595	3.775329	1.1117028	-	-	-	paREP2a	1.527957	3.216978	1.0369013	-	-	-	paREP2a	 0.000000e+00	 0	2.034567e-02	 1.678307e-02	 1.098341e-01	 6.334352e-01	8.106978e-02		 0	 0	 TRUE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7314575	0.6140495	U	0.4686274	0.6162291
13773	129	184108	184109	1	  10	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.527957	3.216978	1.0369013	-	-	-	paREP2a	1.426245	3.006360	1.0296258	-	-	-	paREP2b	 0.000000e+00	 0	1.034529e-02	-1.925406e-03	-1.505551e-02	-1.063394e-01	6.819236e-01		 0	 0	 TRUE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4888472	0.4666119	U	0.4686274	0.6162291
13773	129	184109	184110	1	 399	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.426245	3.006360	1.0296258	-	-	-	paREP2b	1.520386	3.360320	1.1112507	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	8.862498e-03	-1.735014e-03	 1.093367e-02	-9.972382e-02	6.151952e-01		 0	 0	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4912631	0.4752630	U	0.4686274	0.6162291
13773	129	184110	184111	1	  13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.520386	3.360320	1.1112507	-	-	-	conserved within P. aerophilum	1.392119	3.017324	1.0402515	1720	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.645234e-02	-4.089467e-03	-3.024359e-02	-3.015687e-01	1.226433e+00		 0	 4	FALSE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4400289	0.4274593	U	0.4686274	0.6162291
13773	129	184111	184112	1	 126	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.392119	3.017324	1.0402515	1720	Uncharacterized conserved protein	S	conserved hypothetical protein	1.428500	3.155809	1.0596087	-	-	-	hypothetical protein	 0.000000e+00	 0	1.323533e-03	 1.356950e-03	 2.901230e-02	 6.520404e-02	1.208670e-01		 4	 0	 TRUE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182685	0.6007310	U	0.4686274	0.6162291
13773	129	184112	184113	1	 326	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.428500	3.155809	1.0596087	-	-	-	hypothetical protein	1.489763	3.303768	1.0601337	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	3.753190e-03	-8.784115e-04	 1.287498e-02	-5.981356e-02	3.339651e-01		 0	 0	 TRUE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5037176	0.5300523	U	0.4686274	0.6162291
13773	129	184113	184114	1	 -28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.489763	3.303768	1.0601337	-	-	-	conserved within P. aerophilum	1.559038	3.738425	1.2021764	-	-	-	hypothetical protein	 0.000000e+00	 0	4.799012e-03	 4.130370e-03	 9.471877e-02	 3.415490e-01	1.078944e-01		 0	 0	 TRUE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6090195	0.6036927	U	0.4686274	0.6162291
13773	129	184114	184115	1	 181	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.559038	3.738425	1.2021764	-	-	-	hypothetical protein	1.438281	3.454605	1.1237616	-	-	-	hypothetical protein	 0.000000e+00	 0	1.458229e-02	-1.411444e-03	-2.475520e-02	-2.604533e-02	6.481300e-01		 0	 0	 TRUE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5134636	0.4705979	U	0.4686274	0.6162291
13773	129	184115	184116	1	  81	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.438281	3.454605	1.1237616	-	-	-	hypothetical protein	1.478805	3.354787	1.0680063	-	-	-	hypothetical protein	 0.000000e+00	 0	1.642199e-03	-3.594270e-04	 1.800680e-02	-1.202491e-02	1.519983e-01		 0	 0	 TRUE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179220	0.5926706	U	0.4686274	0.6162291
13773	129	184116	184117	1	 409	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.478805	3.354787	1.0680063	-	-	-	hypothetical protein	1.368108	2.963392	1.0870720	-	-	-	hypothetical protein	 0.000000e+00	 0	1.225390e-02	-2.283021e-03	 9.750880e-03	-2.410448e-01	1.067091e+00		 0	 0	 TRUE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4534556	0.4350139	U	0.4686274	0.6162291
13773	129	184117	184118	1	 817	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.368108	2.963392	1.0870720	-	-	-	hypothetical protein	1.406515	3.148186	1.0829615	388	Predicted amidohydrolase	R	carbon nitrogen hydrolase, conjectural	 0.000000e+00	 0	1.475124e-03	 3.737671e-03	 5.193909e-02	 2.342914e-01	1.094122e-01		 0	 3	 TRUE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5634606	0.6033049	U	0.4686274	0.6162291
13773	129	184118	184119	1	 280	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.406515	3.148186	1.0829615	388	Predicted amidohydrolase	R	carbon nitrogen hydrolase, conjectural	1.365381	2.954404	1.0241136	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar-phosphate nucleotidyl transferase	 1.713491e-03	 3	1.691972e-03	 3.860019e-03	 7.954272e-02	 2.398697e-01	1.203339e-01		 3	 3	FALSE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.4893941	0.5644366	0.6009275	U	0.4686274	0.6162291
13773	129	184119	184120	1	   2	Same	-	-	 4.935912	0	  7.598500	  7.59849957	1.365381	2.954404	1.0241136	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	sugar-phosphate nucleotidyl transferase	1.369081	2.960348	1.0554106	449	Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains	M	glucosamine--fructose-6-phosphate aminotransferase (isomerizing)	 6.672049e-03	 3	1.369083e-05	 7.079730e-03	 1.019342e-01	 4.621880e-01	6.808775e-04		 3	63	 TRUE	FALSE	116	 TRUE	2.8363652	1.8151775	0.5480306	2.8096798	0.7136133	0.5663031	0.6610867	0.6526075	U	0.4686274	0.8657478
13773	129	184120	184121	1	  61	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.369081	2.960348	1.0554106	449	Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains	M	glucosamine--fructose-6-phosphate aminotransferase (isomerizing)	1.371731	2.999263	1.0544452	618	Exopolyphosphatase-related proteins	R	conserved hypothetical protein	 0.000000e+00	 0	7.018223e-06	 6.557109e-03	 9.631555e-02	 4.325015e-01	3.392608e-04		63	 0	 TRUE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6488752	0.6537679	U	0.4686274	0.6162291
13773	129	184121	184122	1	 116	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.371731	2.999263	1.0544452	618	Exopolyphosphatase-related proteins	R	conserved hypothetical protein	1.347561	2.986227	1.0480501	-	-	-	hypothetical protein	 0.000000e+00	 0	5.841510e-04	 8.271442e-03	 1.287122e-01	 5.151198e-01	2.126270e-02		 0	 0	 TRUE	FALSE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6803976	0.6369786	U	0.4686274	0.6162291
13773	129	184122	184123	1	 273	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.347561	2.986227	1.0480501	-	-	-	hypothetical protein	1.407019	3.335956	1.1694700	1287	Uncharacterized membrane protein, required for N-linked glycosylation	R	oligosaccharyl transferase STT3 homolog	 0.000000e+00	 0	3.535259e-03	 4.607352e-03	 5.223007e-02	 2.694473e-01	2.071193e-01		 0	 0	FALSE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5792539	0.5774877	U	0.4686274	0.6162291
13773	129	184123	184124	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.407019	3.335956	1.1694700	1287	Uncharacterized membrane protein, required for N-linked glycosylation	R	oligosaccharyl transferase STT3 homolog	1.432519	3.248675	1.0952041	2260	Predicted Zn-ribbon RNA-binding protein	J	conserved hypothetical protein	 0.000000e+00	 0	6.502158e-04	 8.375058e-04	 2.643441e-02	 2.811624e-02	6.570586e-02		 0	 3	FALSE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173816	0.6189031	U	0.4686274	0.6162291
13773	129	184124	184125	1	  -3	Same	-	-	 7.483119	0	 10.276327	 10.27632743	1.432519	3.248675	1.0952041	2260	Predicted Zn-ribbon RNA-binding protein	J	conserved hypothetical protein	1.445281	3.073692	1.0282537	1093	Translation initiation factor 2, alpha subunit (eIF-2alpha)	J	translation initiation factor aIF-2 alpha subunit	 7.846874e-02	 3	1.628835e-04	 1.153483e-04	 2.127658e-02	-2.989736e-03	1.415059e-02	J	 3	12	 TRUE	FALSE	115	 TRUE	2.7337662	1.8433533	0.5480306	2.7524417	0.7136133	0.9433797	0.5198478	0.6408729	Y	1.4497162	0.9123830
13773	129	184125	184126	1	  41	Same	-	-	18.655523	0	 23.515335	 23.19732121	1.445281	3.073692	1.0282537	1093	Translation initiation factor 2, alpha subunit (eIF-2alpha)	J	translation initiation factor aIF-2 alpha subunit	1.409821	3.130552	1.0789084	2051	Ribosomal protein S27E	J	ribosomal protein S27	 4.432379e-01	12	1.257461e-03	 2.540673e-04	 2.800236e-02	-1.137760e-02	1.235498e-01	J	12	12	 TRUE	FALSE	114	 TRUE	2.4331275	1.9361847	0.5480306	2.5333655	0.7776747	1.2514686	0.5181949	0.5998031	Y	1.4497162	0.9240461
13773	129	184126	184127	1	   2	Same	-	-	20.611775	0	 28.880981	 28.88098112	1.409821	3.130552	1.0789084	2051	Ribosomal protein S27E	J	ribosomal protein S27	1.546033	3.286474	1.0371540	1631	Ribosomal protein L44E	J	ribosomal protein L44	 2.393230e-01	 8	1.855370e-02	-3.934382e-03	-6.907505e-03	-2.309412e-01	1.097429e+00	J	12	 8	 TRUE	FALSE	113	 TRUE	2.3451306	1.9572874	0.5480306	2.4725492	0.7652913	1.1721472	0.4567741	0.4330324	Y	1.4497162	0.9266568
13773	129	184127	184128	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.546033	3.286474	1.0371540	1631	Ribosomal protein L44E	J	ribosomal protein L44	1.342831	3.031311	1.0214410	-	-	-	hypothetical protein	 0.000000e+00	 0	4.129087e-02	-1.027426e-02	-9.220768e-02	-5.995480e-01	2.405713e+00		 8	 0	 TRUE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3942818	0.4040016	U	0.4686274	0.6162291
13773	129	184128	184129	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.342831	3.031311	1.0214410	-	-	-	hypothetical protein	1.418383	2.944863	1.0077014	1467	Eukaryotic-type DNA primase, catalytic (small) subunit	L	DNA primase related protein	 0.000000e+00	 0	5.708143e-03	 3.583569e-03	 3.547513e-02	 1.910509e-01	3.428943e-01		 0	 8	 TRUE	FALSE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5464741	0.5266146	U	0.4686274	0.6162291
13773	129	184129	184130	1	  -3	Same	-	-	 2.079442	0	  2.079442	  1.49418465	1.418383	2.944863	1.0077014	1467	Eukaryotic-type DNA primase, catalytic (small) subunit	L	DNA primase related protein	1.305768	2.868950	0.9986898	592	DNA polymerase sliding clamp subunit (PCNA homolog)	L	proliferating-cell nuclear antigen homolog (PCNA)	 2.393230e-01	 8	1.268220e-02	 4.807000e-03	 1.280296e-01	 2.168348e-01	4.845357e-01	L	 8	12	 TRUE	FALSE	110	 TRUE	2.9335626	1.6418870	0.5480306	2.9479804	0.7652913	1.1721472	0.5560661	0.4953921	Y	1.4497162	0.8871167
13773	129	184130	184131	1	 103	Same	-	-	10.700995	0	 18.504838	 18.08545746	1.305768	2.868950	0.9986898	592	DNA polymerase sliding clamp subunit (PCNA homolog)	L	proliferating-cell nuclear antigen homolog (PCNA)	1.544162	3.203826	1.0325313	1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	K	DNA-directed RNA polymerase subunit M	 3.229691e-01	10	5.683149e-02	-1.350944e-02	-1.692175e-01	-6.754688e-01	2.742926e+00	0	12	10	 TRUE	FALSE	109	 TRUE	2.6513462	1.8986352	0.5480306	2.6161757	0.7739415	1.2322996	0.3893631	0.4021424	N	0.5492530	0.8837605
13773	129	184131	184132	1	 102	Divergent	-	+	 0.000000	0	  0.000000	 -0.97828712	1.544162	3.203826	1.0325313	1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	K	DNA-directed RNA polymerase subunit M	1.382233	3.059724	1.0497597	2238	Ribosomal protein S19E (S16A)	J	ribosomal protein S19	 3.229691e-01	10	2.622104e-02	-6.415920e-03	-6.398734e-02	-4.127555e-01	1.676260e+00	0	10	12	 TRUE	FALSE	108	FALSE	0.4469764	0.2115163	0.5480306	0.4469764	0.7739415	1.2322996	0.4169638	0.4127699	N	0.5492530	0.5379868
13773	129	184132	184133	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.382233	3.059724	1.0497597	2238	Ribosomal protein S19E (S16A)	J	ribosomal protein S19	1.419967	3.120064	1.0706143	2118	DNA-binding protein	R	conserved hypothetical protein	 0.000000e+00	 0	1.423882e-03	 2.173429e-03	 3.651118e-02	 1.246548e-01	1.214012e-01		12	 0	FALSE	FALSE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5229927	0.6004968	U	0.4686274	0.6162291
13773	129	184133	184134	1	  38	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.419967	3.120064	1.0706143	2118	DNA-binding protein	R	conserved hypothetical protein	1.387023	3.264630	1.2288216	-	-	-	ribosomal protein L39E, frameshift	 0.000000e+00	 0	1.085317e-03	 2.022892e-03	 5.240440e-02	 1.165691e-01	9.708748e-02		 0	 0	FALSE	FALSE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5214315	0.6079718	U	0.4686274	0.6162291
13773	129	184134	184135	1	  91	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.387023	3.264630	1.2288216	-	-	-	ribosomal protein L39E, frameshift	1.445454	3.216169	1.0700985	1646	Predicted phosphate-binding enzymes, TIM-barrel fold	R	pcrB homolog	 0.000000e+00	 0	3.414237e-03	 3.822698e-04	 1.477438e-02	-1.997162e-02	3.234056e-01		 0	15	FALSE	FALSE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5155618	0.5336048	U	0.4686274	0.6162291
13773	129	184135	184136	1	 -13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.445454	3.216169	1.0700985	1646	Predicted phosphate-binding enzymes, TIM-barrel fold	R	pcrB homolog	1.413268	2.881542	0.9900556	4888	Uncharacterized Zn ribbon-containing protein	R	conserved hypothetical protein	 0.000000e+00	 0	1.035969e-03	 2.264106e-04	 2.698662e-02	-1.062075e-02	1.024196e-01		15	 0	 TRUE	FALSE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183479	0.6055846	U	0.4686274	0.6162291
13773	129	184136	184137	1	 130	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.413268	2.881542	0.9900556	4888	Uncharacterized Zn ribbon-containing protein	R	conserved hypothetical protein	1.435251	3.087688	1.0764464	303	Molybdopterin biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)	 0.000000e+00	 0	4.832572e-04	 6.154146e-04	 2.490376e-02	 1.712325e-02	4.919340e-02		 0	 1	 TRUE	FALSE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179063	0.6240491	U	0.4686274	0.6162291
13773	129	184137	184138	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.435251	3.087688	1.0764464	303	Molybdopterin biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)	1.403741	2.976841	1.0238262	2236	Predicted phosphoribosyltransferases	R	phosphoribosyl transferase	 9.520652e-04	 1	9.928566e-04	 7.691914e-04	 3.483599e-02	 2.298610e-02	1.014396e-01		 1	 5	FALSE	FALSE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4684288	0.5174697	0.6061495	U	0.4686274	0.6162291
13773	129	184138	184139	1	  42	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.403741	2.976841	1.0238262	2236	Predicted phosphoribosyltransferases	R	phosphoribosyl transferase	1.443845	3.282502	1.1256136	-	-	-	hypothetical protein	 0.000000e+00	 0	1.608304e-03	 3.596719e-04	 1.932135e-02	-9.310824e-03	1.629606e-01		 5	 0	 TRUE	FALSE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187601	0.5893580	U	0.4686274	0.6162291
13773	129	184139	184140	1	  94	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.443845	3.282502	1.1256136	-	-	-	hypothetical protein	1.497065	3.258989	1.1037526	-	-	-	hypothetical protein	 0.000000e+00	 0	2.832334e-03	-3.447279e-04	 2.185954e-02	 1.189298e-02	2.113318e-01		 0	 0	 TRUE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186611	0.5758379	U	0.4686274	0.6162291
13773	129	184140	184141	1	 -16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.497065	3.258989	1.1037526	-	-	-	hypothetical protein	1.459599	3.231775	1.1308883	483	Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family	G	extragenic suppressor protein suhB homolog	 0.000000e+00	 0	1.403656e-03	 3.747973e-04	 1.999377e-02	 8.659572e-02	9.329907e-02		 0	22	 TRUE	FALSE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176919	0.6097348	U	0.4686274	0.6162291
13773	129	184141	184142	1	 124	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.459599	3.231775	1.1308883	483	Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family	G	extragenic suppressor protein suhB homolog	1.465602	3.138234	1.0712956	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	 0.000000e+00	 0	3.603267e-05	 1.166042e-04	 2.244276e-02	 4.021006e-02	2.120380e-03	0	22	 0	 TRUE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182150	0.6501030	N	0.5492530	0.6245624
13773	129	184142	184143	1	 140	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.465602	3.138234	1.0712956	467	RecA-superfamily ATPases implicated in signal transduction	T	P. aerophilum family 417, putative ATP binding	1.789632	3.691430	1.1360227	3269	Predicted RNA-binding protein, contains TRAM domain	R	conserved hypothetical protein	 0.000000e+00	 0	1.049956e-01	 4.806059e-03	 3.669533e-01	 2.224496e-01	5.842919e-01		 0	 0	 TRUE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5582106	0.4791334	U	0.4686274	0.6162291
13773	129	184143	184144	1	1279	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.789632	3.691430	1.1360227	3269	Predicted RNA-binding protein, contains TRAM domain	R	conserved hypothetical protein	1.605426	3.545064	1.0923047	-	-	-	hypothetical protein	 0.000000e+00	 0	3.393185e-02	 5.210010e-02	 3.996251e-01	 8.655037e-01	1.307626e-02		 0	 0	 TRUE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7979565	0.6414085	U	0.4686274	0.6162291
13773	129	184144	184145	1	  27	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.605426	3.545064	1.0923047	-	-	-	hypothetical protein	1.533511	3.698668	1.0537080	-	-	-	hypothetical protein	 0.000000e+00	 0	5.171807e-03	 1.264890e-02	 1.255040e-01	 6.043083e-01	3.392608e-02		 0	 0	 TRUE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7218001	0.6305306	U	0.4686274	0.6162291
13773	129	184145	184146	1	 371	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.533511	3.698668	1.0537080	-	-	-	hypothetical protein	1.508771	3.623981	1.2101471	471	Di- and tricarboxylate transporters	P	conserved hypothetical protein	 0.000000e+00	 0	6.120604e-04	 4.711777e-03	 6.706497e-02	 3.869693e-01	1.702194e-02		 0	 8	FALSE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6288167	0.6393080	U	0.4686274	0.6162291
13773	129	184146	184147	1	 -31	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.508771	3.623981	1.2101471	471	Di- and tricarboxylate transporters	P	conserved hypothetical protein	1.511625	3.646041	1.2169422	-	-	-	ABC-2 type transport system, membrane protein	 0.000000e+00	 0	8.144664e-06	 3.456001e-03	 6.199860e-02	 3.216145e-01	1.908342e-04		 8	 0	FALSE	FALSE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6005314	0.6545960	U	0.4686274	0.6162291
13773	129	184147	184148	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511625	3.646041	1.2169422	-	-	-	ABC-2 type transport system, membrane protein	1.362449	3.476284	1.1647191	842	ABC-type multidrug transport system, permease component	V	ABC-2 type transport system, membrane protein	 0.000000e+00	 0	2.225349e-02	-5.357278e-03	-3.102403e-02	-4.079658e-01	1.650525e+00		 0	 0	 TRUE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4178218	0.4132931	U	0.4686274	0.6162291
13773	129	184148	184149	1	 -28	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.362449	3.476284	1.1647191	842	ABC-type multidrug transport system, permease component	V	ABC-2 type transport system, membrane protein	1.469473	3.240744	1.0474256	1131	ABC-type multidrug transport system, ATPase component	V	ABC-2 type transport system ATP-binding protein	 0.000000e+00	 0	1.145424e-02	-1.608148e-03	-1.732521e-02	-1.903477e-01	9.574840e-01	V	 0	 3	 TRUE	FALSE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4673532	0.4422922	Y	1.4497162	0.7118045
13773	129	184149	184150	1	 704	Divergent	-	+	 0.000000	0	  0.000000	 -0.43323636	1.469473	3.240744	1.0474256	1131	ABC-type multidrug transport system, ATPase component	V	ABC-2 type transport system ATP-binding protein	1.489034	3.311423	1.1162642	637	Predicted phosphatase/phosphohexomutase	R	phosphoglycolate phosphatase (pgp), conjectural	 1.386361e-03	 3	3.826353e-04	 6.805756e-04	 3.146319e-02	 1.165520e-01	2.799137e-02		 3	40	 TRUE	FALSE	102	FALSE	0.4469764	0.2383906	0.5480306	0.4469764	0.7136133	0.4803007	0.5213500	0.6340416	U	0.4686274	0.5377022
13773	129	184150	184151	1	 555	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.489034	3.311423	1.1162642	637	Predicted phosphatase/phosphohexomutase	R	phosphoglycolate phosphatase (pgp), conjectural	1.564512	3.220068	1.0348875	-	-	-	paREP2b	 0.000000e+00	 0	5.696821e-03	 4.257963e-03	 9.942001e-02	 3.439786e-01	1.262621e-01		40	 0	FALSE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6103763	0.5992342	U	0.4686274	0.6162291
13773	129	184151	184152	1	 237	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.564512	3.220068	1.0348875	-	-	-	paREP2b	1.278194	3.159309	1.1600496	-	-	-	paREP2b	 0.000000e+00	 0	8.197770e-02	-1.959203e-02	-1.646534e-01	-7.680369e-01	3.104952e+00		 0	 0	 TRUE	FALSE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3841538	0.4007745	U	0.4686274	0.6162291
13773	129	184152	184153	1	 105	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.278194	3.159309	1.1600496	-	-	-	paREP2b	1.374766	3.038256	1.0757664	-	-	-	P. aerophilum family 1964 protein	 0.000000e+00	 0	9.326082e-03	 1.327170e-02	 1.146457e-01	 6.144295e-01	1.150683e-01		 0	 0	 TRUE	FALSE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7251337	0.6018877	U	0.4686274	0.6162291
13773	129	184153	184154	1	 182	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.374766	3.038256	1.0757664	-	-	-	P. aerophilum family 1964 protein	1.579002	3.689968	1.0831777	-	-	-	hypothetical protein	 0.000000e+00	 0	4.171227e-02	-9.778283e-03	-6.715061e-02	-5.207606e-01	2.119561e+00		 0	 0	FALSE	FALSE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4023421	0.4070301	U	0.4686274	0.6162291
13773	129	184154	184155	1	 218	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.579002	3.689968	1.0831777	-	-	-	hypothetical protein	1.376564	2.952742	1.0060819	1801	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.098099e-02	-9.548815e-03	-1.180435e-01	-5.074888e-01	2.072893e+00		 0	 6	FALSE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4048353	0.4073901	U	0.4686274	0.6162291
13773	129	184155	184156	1	  39	Divergent	-	+	 0.000000	0	  0.000000	 -0.13353139	1.376564	2.952742	1.0060819	1801	Uncharacterized conserved protein	S	conserved hypothetical protein	1.346791	2.883768	0.9562876	-	-	-	conserved hypothetical protein	 3.505284e-02	 1	8.864511e-04	 7.827256e-03	 1.258229e-01	 4.937729e-01	3.420938e-02		 6	 1	 TRUE	FALSE	102	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7716100	0.6703862	0.6303843	U	0.4686274	0.5517368
13773	129	184156	184157	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.346791	2.883768	0.9562876	-	-	-	conserved hypothetical protein	1.249923	2.541840	0.9795289	-	-	-	hypothetical protein	 0.000000e+00	 0	9.383358e-03	 2.107418e-02	 3.424356e-01	 7.932341e-01	3.564359e-02		 1	 0	FALSE	FALSE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7828436	0.6297015	U	0.4686274	0.6162291
13773	129	184157	184158	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.249923	2.541840	0.9795289	-	-	-	hypothetical protein	1.439172	3.057515	1.0831408	1446	Asparaginase	E	asparaginase	 0.000000e+00	 0	3.581510e-02	 2.462186e-03	-5.317341e-02	 1.747546e-02	9.455062e-01		 0	14	FALSE	FALSE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178537	0.4430303	U	0.4686274	0.6162291
13773	129	184158	184159	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.31372225	1.439172	3.057515	1.0831408	1446	Asparaginase	E	asparaginase	1.290774	2.949834	1.0111545	522	Ribosomal protein S4 and related proteins	J	ribosomal protein S4	 2.214465e-02	 6	2.202187e-02	 1.962941e-03	 1.088249e-01	 1.697423e-02	8.910896e-01	0	14	 6	 TRUE	FALSE	103	 TRUE	0.4469764	0.2527773	0.5480306	0.4469764	0.7537284	0.6919696	0.5179607	0.4474444	N	0.5492530	0.5510247
13773	129	184159	184160	1	  32	Same	-	-	11.162942	0	 16.769561	 16.76956109	1.290774	2.949834	1.0111545	522	Ribosomal protein S4 and related proteins	J	ribosomal protein S4	1.415568	3.129634	1.0651265	99	Ribosomal protein S13	J	ribosomal protein S13	 2.318511e-03	 6	1.557347e-02	 5.754182e-03	 2.576124e-02	 2.479714e-01	4.952789e-01	J	 6	41	 TRUE	FALSE	102	 TRUE	2.6369314	1.8883037	0.5480306	2.6514272	0.7537284	0.5021730	0.5686721	0.4929568	Y	1.4497162	0.9177651
13773	129	184160	184161	1	  29	Same	-	-	 0.000000	0	  0.000000	 -0.24140159	1.415568	3.129634	1.0651265	99	Ribosomal protein S13	J	ribosomal protein S13	1.592350	3.626881	1.0890554	1173	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	oligopeptide ABC transporter, permease protein	 1.111513e-03	 3	3.125193e-02	-5.049800e-03	 8.891959e-03	-2.202651e-01	1.236653e+00		41	 3	 TRUE	FALSE	101	 TRUE	0.4469764	0.2682666	0.5480306	0.4469764	0.7136133	0.4727897	0.4593792	0.4267515	U	0.4686274	0.5471498
13773	129	184161	184162	1	  -3	Same	-	-	 5.746842	0	 11.353461	 11.35346069	1.592350	3.626881	1.0890554	1173	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	oligopeptide ABC transporter, permease protein	1.579403	3.824023	1.1729522	601	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	oligopeptide ABC transporter, permease protein	 2.978406e-02	 3	1.676118e-04	 1.804400e-02	 2.228701e-01	 7.047171e-01	8.505079e-04		 3	11	 TRUE	FALSE	100	 TRUE	2.7746139	1.8596033	0.5480306	2.7198489	0.7136133	0.7347716	0.7545308	0.6520519	U	0.4686274	0.8730427
13773	129	184162	184163	1	  50	Same	-	-	 5.669881	0	  5.669881	  5.66988092	1.579403	3.824023	1.1729522	601	ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	EP	oligopeptide ABC transporter, permease protein	1.623356	3.486957	1.0810143	3889	Predicted solute binding protein	R	oligopeptide binding protein, putative	 5.377067e-02	 2	1.931836e-03	 2.201311e-02	 3.116037e-01	 7.439736e-01	5.889944e-03		11	 2	 TRUE	FALSE	 99	 TRUE	2.7848973	1.8012140	0.5480306	2.8401840	0.6838149	0.8640648	0.7653307	0.6456836	U	0.4686274	0.8644161
13773	129	184163	184164	1	 246	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.623356	3.486957	1.0810143	3889	Predicted solute binding protein	R	oligopeptide binding protein, putative	1.516158	3.475877	1.1617088	4945	Membrane-anchored protein predicted to be involved in regulation of amylopullulanase	G	pullulanase	 0.000000e+00	 0	1.149132e-02	 1.113731e-02	 8.651370e-02	 5.418896e-01	9.050724e-02		 2	 0	 TRUE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6938559	0.6107212	U	0.4686274	0.6162291
13773	129	184164	184165	1	 615	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.516158	3.475877	1.1617088	4945	Membrane-anchored protein predicted to be involved in regulation of amylopullulanase	G	pullulanase	1.328157	2.829538	0.9666244	180	Tryptophanyl-tRNA synthetase	J	tryptophanyl-tRNA synthetase	 0.000000e+00	 0	3.534466e-02	-7.981465e-03	-4.466816e-02	-5.248258e-01	2.173531e+00	0	 0	25	 TRUE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4018867	0.4062445	N	0.5492530	0.6245624
13773	129	184165	184166	1	  35	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.328157	2.829538	0.9666244	180	Tryptophanyl-tRNA synthetase	J	tryptophanyl-tRNA synthetase	1.362000	3.047450	1.0672818	177	Predicted EndoIII-related endonuclease	L	DNA-(apurinic or apyrimidinic site) lyase, conjectural	 0.000000e+00	 0	1.145344e-03	 1.101647e-02	 1.312710e-01	 6.220158e-01	2.597465e-02	0	25	 0	 TRUE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7272311	0.6350049	N	0.5492530	0.6245624
13773	129	184166	184167	1	  75	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.362000	3.047450	1.0672818	177	Predicted EndoIII-related endonuclease	L	DNA-(apurinic or apyrimidinic site) lyase, conjectural	1.368357	3.035761	1.0375061	5014	Predicted Fe-S oxidoreductase	R	molybdenum cofactor biosynthesis protein (moaA)	 0.000000e+00	 0	4.041077e-05	 7.422874e-03	 1.047444e-01	 4.804498e-01	1.414176e-03		 0	 2	 TRUE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6665569	0.6511912	U	0.4686274	0.6162291
13773	129	184167	184168	1	 210	Divergent	-	+	 0.000000	0	  0.000000	 -0.06062462	1.368357	3.035761	1.0375061	5014	Predicted Fe-S oxidoreductase	R	molybdenum cofactor biosynthesis protein (moaA)	1.452508	3.186439	1.0998393	2097	Ribosomal protein L31E	J	ribosomal protein L31	 1.349135e-02	 2	7.081479e-03	-9.260939e-05	 2.148077e-03	-7.403483e-02	6.151952e-01		 2	 8	 TRUE	FALSE	 94	FALSE	0.4469764	0.3041435	0.5480306	0.4469764	0.6838149	0.6281588	0.5001749	0.4752630	U	0.4686274	0.5584497
13773	129	184168	184169	1	   0	Same	+	+	19.942188	0	 22.139412	 22.13941216	1.452508	3.186439	1.0998393	2097	Ribosomal protein L31E	J	ribosomal protein L31	1.323304	3.026093	1.0816571	1976	Translation initiation factor 6 (eIF-6)	J	translation initiation factor aIF-6	 2.393230e-01	 8	1.669365e-02	-1.428558e-04	 6.072917e-02	-9.744971e-02	9.954005e-01	J	 8	12	FALSE	FALSE	 95	 TRUE	2.3799019	1.9298876	0.5480306	2.5564277	0.7652913	1.1721472	0.4926112	0.4395482	Y	1.4497162	0.9239461
13773	129	184169	184170	1	  57	Same	+	+	 2.890372	0	  2.890372	  2.87235325	1.323304	3.026093	1.0816571	1976	Translation initiation factor 6 (eIF-6)	J	translation initiation factor aIF-6	1.327226	2.919822	1.0483733	2157	Ribosomal protein L20A (L18A)	J	ribosomal protein LX	 5.118686e-02	 2	1.538022e-05	 1.590436e-02	 2.041836e-01	 7.789162e-01	1.154429e-04	J	12	 2	FALSE	FALSE	 96	 TRUE	2.8691690	1.7403663	0.5480306	2.9115413	0.6838149	0.8456214	0.7772606	0.6549470	Y	1.4497162	0.8998068
13773	129	184170	184171	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.327226	2.919822	1.0483733	2157	Ribosomal protein L20A (L18A)	J	ribosomal protein LX	1.357444	3.057758	1.0693971	1730	Predicted prefoldin, molecular chaperone implicated in de novo protein folding	O	conserved hypothetical protein	 0.000000e+00	 0	9.131374e-04	 1.166531e-02	 1.403938e-01	 6.442721e-01	2.037685e-02	0	 2	 0	FALSE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7348685	0.6373256	N	0.5492530	0.6245624
13773	129	184171	184172	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.357444	3.057758	1.0693971	1730	Predicted prefoldin, molecular chaperone implicated in de novo protein folding	O	conserved hypothetical protein	1.433457	3.070995	1.0587444	552	Signal recognition particle GTPase	U	signal recognition particle protein (docking protein), probable	 0.000000e+00	 0	5.777985e-03	 1.685029e-03	 1.884184e-02	 5.242109e-02	4.396820e-01	0	 0	12	FALSE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187795	0.5054889	N	0.5492530	0.6245624
13773	129	184172	184173	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.433457	3.070995	1.0587444	552	Signal recognition particle GTPase	U	signal recognition particle protein (docking protein), probable	1.444763	3.445529	1.1375239	-	-	-	hypothetical protein	 0.000000e+00	 0	1.278154e-04	 1.189148e-04	 2.142278e-02	-2.245836e-03	1.057598e-02		12	 0	FALSE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199125	0.6424418	U	0.4686274	0.6162291
13773	129	184173	184174	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.444763	3.445529	1.1375239	-	-	-	hypothetical protein	1.461024	3.172987	1.0629700	250	Transcription antiterminator	K	transcription antitermination protein nusG, putative	 0.000000e+00	 0	2.644251e-04	-6.385480e-05	 2.011501e-02	 5.916449e-03	2.451159e-02		 0	11	FALSE	FALSE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5193869	0.6356211	U	0.4686274	0.6162291
13773	129	184174	184175	1	  36	Same	+	+	20.533813	0	 31.000244	 30.92020145	1.461024	3.172987	1.0629700	250	Transcription antiterminator	K	transcription antitermination protein nusG, putative	1.362695	2.965688	1.0422739	80	Ribosomal protein L11	J	ribosomal protein L11	 4.243113e-02	11	9.668546e-03	-8.542534e-04	 3.049299e-02	-1.333366e-01	8.048968e-01	0	11	44	FALSE	FALSE	101	 TRUE	2.3661331	1.9785636	0.5480306	2.4071570	0.7764261	0.8151714	0.4810088	0.4547804	N	0.5492530	0.8971298
13773	129	184175	184176	1	  -3	Same	+	+	58.970581	0	 82.497934	 82.16976074	1.362695	2.965688	1.0422739	80	Ribosomal protein L11	J	ribosomal protein L11	1.368653	2.992130	1.0379044	81	Ribosomal protein L1	J	ribosomal protein L1	-4.174930e-02	44	3.549320e-05	 7.338855e-03	 1.039519e-01	 4.756577e-01	1.472486e-03	J	44	57	FALSE	FALSE	102	 TRUE	2.0419822	2.0676247	0.5480306	2.0808318	0.7723149	0.5246430	0.6648349	0.6510547	Y	1.4497162	0.9378827
13773	129	184176	184177	1	  40	Same	+	+	21.765172	0	 29.215252	 29.21525165	1.368653	2.992130	1.0379044	81	Ribosomal protein L1	J	ribosomal protein L1	1.344258	2.966508	1.0414355	244	Ribosomal protein L10	J	acidic ribosomal protein P0 (L10E)	 3.831506e-02	10	5.951189e-04	 8.864370e-03	 1.361454e-01	 5.446384e-01	1.994099e-02	J	57	10	FALSE	FALSE	103	 TRUE	2.3164721	1.9657770	0.5480306	2.4469457	0.7739415	0.7923188	0.6950064	0.6374861	Y	1.4497162	0.9276274
13773	129	184177	184178	1	  16	Same	+	+	 0.000000	0	  0.000000	 -0.73190692	1.344258	2.966508	1.0414355	244	Ribosomal protein L10	J	acidic ribosomal protein P0 (L10E)	1.433107	3.153237	1.0569607	1577	Mevalonate kinase	I	mevalonate kinase	 1.600341e-01	10	7.894263e-03	 1.959017e-03	 1.534384e-02	 6.044614e-02	5.439487e-01	0	10	13	FALSE	FALSE	104	 TRUE	0.4469764	0.2226932	0.5480306	0.4469764	0.7739415	1.0996350	0.5185505	0.4843660	N	0.5492530	0.5415244
13773	129	184178	184179	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.433107	3.153237	1.0569607	1577	Mevalonate kinase	I	mevalonate kinase	1.470226	3.763483	1.2243997	-	-	-	hypothetical protein	 0.000000e+00	 0	1.377776e-03	-3.443691e-04	 1.676283e-02	-2.022489e-02	1.198021e-01		13	 0	FALSE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5154241	0.6010459	U	0.4686274	0.6162291
13773	129	184179	184180	1	  16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.470226	3.763483	1.2243997	-	-	-	hypothetical protein	1.438811	3.116363	1.0535641	2820	Uridine phosphorylase	F	uridine phosphorylase	 0.000000e+00	 0	9.869039e-04	-2.369577e-04	 1.746843e-02	-7.923153e-03	9.050724e-02		 0	15	FALSE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192381	0.6107212	U	0.4686274	0.6162291
13773	129	184180	184181	1	 -28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.438811	3.116363	1.0535641	2820	Uridine phosphorylase	F	uridine phosphorylase	1.399048	3.099869	1.0792486	-	-	-	hypothetical protein	 0.000000e+00	 0	1.581076e-03	 6.586075e-04	 3.499450e-02	 1.257856e-02	1.617237e-01		15	 0	FALSE	FALSE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185743	0.5896102	U	0.4686274	0.6162291
13773	129	184181	184182	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.399048	3.099869	1.0792486	-	-	-	hypothetical protein	1.427614	3.143614	1.0573621	4080	RecB-family nuclease	L	conserved hypothetical protein	 0.000000e+00	 0	8.159978e-04	 1.244717e-03	 2.976902e-02	 6.189978e-02	8.282734e-02		 0	 2	FALSE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184094	0.6132788	U	0.4686274	0.6162291
13773	129	184182	184183	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.427614	3.143614	1.0573621	4080	RecB-family nuclease	L	conserved hypothetical protein	1.427689	3.125520	1.0906589	1712	Predicted dinucleotide-utilizing enzyme	R	nicotinate-nucleotide pyrophosphorylase AND conserved protein	 0.000000e+00	 0	5.646819e-09	 5.636617e-04	 2.731912e-02	 2.048640e-02	5.889944e-07		 2	 0	FALSE	FALSE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176236	0.6559820	U	0.4686274	0.6162291
13773	129	184183	184184	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.427689	3.125520	1.0906589	1712	Predicted dinucleotide-utilizing enzyme	R	nicotinate-nucleotide pyrophosphorylase AND conserved protein	1.359563	2.920612	1.0427335	379	Quinolinate synthase	H	quinolinate synthetase A	 0.000000e+00	 0	4.641070e-03	 2.176726e-03	 6.617645e-02	 1.033084e-01	3.375227e-01		 0	46	 TRUE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190998	0.5282099	U	0.4686274	0.6162291
13773	129	184184	184185	1	 104	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.359563	2.920612	1.0427335	379	Quinolinate synthase	H	quinolinate synthetase A	1.503549	3.415555	1.1543291	61	Predicted sugar kinase	G	conserved hypothetical protein	 0.000000e+00	 0	2.073174e-02	-4.789436e-03	-4.976846e-02	-3.821301e-01	1.566820e+00	0	46	 0	 TRUE	FALSE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4222664	0.4151533	N	0.5492530	0.6245624
13773	129	184185	184186	1	   9	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.503549	3.415555	1.1543291	61	Predicted sugar kinase	G	conserved hypothetical protein	1.403588	2.946256	1.0037612	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein, hsp20 homolog, conjectural	 0.000000e+00	 0	9.992076e-03	-2.493286e-03	-9.519061e-03	-2.018036e-01	8.284772e-01	0	 0	 0	 TRUE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4638104	0.4521115	N	0.5492530	0.6245624
13773	129	184186	184187	1	  27	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.403588	2.946256	1.0037612	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein, hsp20 homolog, conjectural	1.546706	3.594299	1.1497608	1079	Uncharacterized ABC-type transport system, permease component	R	ribose ABC transporter, permease protein	 0.000000e+00	 0	2.048280e-02	-4.556425e-03	-1.527018e-02	-2.807065e-01	1.246916e+00		 0	36	 TRUE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4452427	0.4261574	U	0.4686274	0.6162291
13773	129	184187	184188	1	  -3	Same	-	-	40.888118	0	 67.464862	 66.97821439	1.546706	3.594299	1.1497608	1079	Uncharacterized ABC-type transport system, permease component	R	ribose ABC transporter, permease protein	1.391263	3.361726	1.1740136	4603	ABC-type uncharacterized transport system, permease component	R	ribose ABC transporter, permease protein	 3.494012e-01	29	2.416257e-02	-5.731165e-03	-6.016154e-02	-3.613110e-01	1.504058e+00		36	29	 TRUE	FALSE	104	 TRUE	2.0945060	2.0544067	0.5480306	2.1326860	0.7756873	1.2446717	0.4257877	0.4168764	U	0.4686274	0.9055657
13773	129	184188	184189	1	  -3	Same	-	-	37.991811	0	 75.073733	 74.77809375	1.391263	3.361726	1.1740136	4603	ABC-type uncharacterized transport system, permease component	R	ribose ABC transporter, permease protein	1.457634	3.165580	1.1109851	3845	ABC-type uncharacterized transport systems, ATPase components	R	ribose ABC transport system ATP-binding	 2.481876e-01	29	4.405074e-03	-3.752772e-04	 7.266996e-03	-7.437645e-02	4.136178e-01		29	42	 TRUE	FALSE	103	 TRUE	2.1030874	2.0610077	0.5480306	2.1069815	0.7756873	1.1871904	0.5000034	0.5101580	U	0.4686274	0.9061921
13773	129	184189	184190	1	   0	Same	-	-	18.531347	0	 26.130396	 26.02671778	1.457634	3.165580	1.1109851	3845	ABC-type uncharacterized transport systems, ATPase components	R	ribose ABC transport system ATP-binding	1.363853	2.955727	1.0443157	1744	Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein	R	sugar binding protein	 9.398390e-02	11	8.794799e-03	-5.463460e-04	 3.371139e-02	-1.062852e-01	7.296280e-01		42	11	 TRUE	FALSE	102	 TRUE	2.4523295	1.9467144	0.5480306	2.5095833	0.7764261	0.9909368	0.4890786	0.4617333	U	0.4686274	0.8888532
13773	129	184190	184191	1	  23	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.363853	2.955727	1.0443157	1744	Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein	R	sugar binding protein	1.520383	3.538968	1.1151677	-	-	-	hypothetical protein	 0.000000e+00	 0	2.450156e-02	-6.039371e-03	-5.724979e-02	-4.386288e-01	1.760764e+00		11	 0	 TRUE	FALSE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4132793	0.4111960	U	0.4686274	0.6162291
13773	129	184191	184192	1	 -16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.520383	3.538968	1.1151677	-	-	-	hypothetical protein	1.503401	3.250005	1.1175356	2366	Protein related to penicillin acylase	R	penicillin amidase	 0.000000e+00	 0	2.884018e-04	 3.588039e-03	 5.747176e-02	 3.289716e-01	9.350875e-03		 0	 6	 TRUE	FALSE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6031483	0.6432396	U	0.4686274	0.6162291
13773	129	184192	184193	1	  81	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.503401	3.250005	1.1175356	2366	Protein related to penicillin acylase	R	penicillin amidase	1.609982	3.841900	1.1457547	-	-	-	P. aerophilum family 70 protein	 0.000000e+00	 0	1.135962e-02	 8.247900e-03	 1.741757e-01	 4.657397e-01	1.268081e-01		 6	 0	 TRUE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6621035	0.5988589	U	0.4686274	0.6162291
13773	129	184193	184194	1	 -30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.609982	3.841900	1.1457547	-	-	-	P. aerophilum family 70 protein	1.594513	3.601166	1.1341256	-	-	-	P. aerophilum family 68 protein, part 2, authentic frameshift	 0.000000e+00	 0	2.393070e-04	 2.269730e-02	 2.742682e-01	 7.572507e-01	6.808775e-04		 0	 0	 TRUE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7694339	0.6526075	U	0.4686274	0.6162291
13773	129	184194	184195	1	  97	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.594513	3.601166	1.1341256	-	-	-	P. aerophilum family 68 protein, part 2, authentic frameshift	1.586645	3.567309	1.1263459	-	-	-	P. aerophilum family 68 protein, part 1, authentic frameshift	 0.000000e+00	 0	6.190086e-05	 1.935727e-02	 2.415064e-01	 7.217237e-01	2.355978e-04		 0	 0	 TRUE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7608053	0.6542630	U	0.4686274	0.6162291
13773	129	184195	184196	1	 150	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.586645	3.567309	1.1263459	-	-	-	P. aerophilum family 68 protein, part 1, authentic frameshift	1.498452	3.168518	1.0292089	-	-	-	hypothetical protein	 0.000000e+00	 0	7.777936e-03	 6.364905e-03	 5.432634e-02	 4.193363e-01	1.182135e-01		 0	 0	 TRUE	FALSE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6434625	0.6012841	U	0.4686274	0.6162291
13773	129	184196	184197	1	   1	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.498452	3.168518	1.0292089	-	-	-	hypothetical protein	1.404411	3.094152	1.0541372	3357	Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon	K	conserved hypothetical protein	 0.000000e+00	 0	8.843762e-03	-2.210939e-03	-5.131812e-03	-1.842481e-01	7.534187e-01		 0	 7	FALSE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4690090	0.4592446	U	0.4686274	0.6162291
13773	129	184197	184198	1	 183	Same	+	+	 0.000000	0	  0.000000	 -0.63415686	1.404411	3.094152	1.0541372	3357	Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon	K	conserved hypothetical protein	1.428890	3.135361	1.0944441	585	Uncharacterized conserved protein	S	conserved hypothetical protein	 1.648650e-01	 7	5.992140e-04	 1.057224e-03	 2.877959e-02	 4.769441e-02	5.807249e-02		 7	16	FALSE	FALSE	 98	 TRUE	0.4469764	0.2287048	0.5480306	0.4469764	0.7596462	1.1056755	0.5187200	0.6210721	U	0.4686274	0.5346331
13773	129	184198	184199	1	  37	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.428890	3.135361	1.0944441	585	Uncharacterized conserved protein	S	conserved hypothetical protein	1.392558	3.078455	1.0416103	2006	Uncharacterized conserved protein	S	hypothetical protein	 0.000000e+00	 0	1.319995e-03	 1.323949e-03	 4.372225e-02	 6.164651e-02	1.219366e-01		16	 0	FALSE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184218	0.6003415	U	0.4686274	0.6162291
13773	129	184199	184200	1	 107	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.392558	3.078455	1.0416103	2006	Uncharacterized conserved protein	S	hypothetical protein	1.431923	3.037424	1.0633015	93	Ribosomal protein L14	J	ribosomal protein L14	 0.000000e+00	 0	1.549623e-03	 1.145473e-03	 2.630296e-02	 4.366628e-02	1.496140e-01		 0	54	FALSE	FALSE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184464	0.5933123	U	0.4686274	0.6162291
13773	129	184200	184201	1	  68	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.431923	3.037424	1.0633015	93	Ribosomal protein L14	J	ribosomal protein L14	1.375530	3.027612	1.0574483	-	-	-	hypothetical protein	 0.000000e+00	 0	3.180237e-03	 1.477004e-03	 5.165998e-02	 5.726380e-02	2.869604e-01		54	 0	FALSE	FALSE	101	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186677	0.5481348	U	0.4686274	0.6162291
13773	129	184201	184202	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.375530	3.027612	1.0574483	-	-	-	hypothetical protein	1.458692	3.221318	1.0870502	-	-	-	hypothetical protein	 0.000000e+00	 0	6.915878e-03	-5.537083e-04	-2.164922e-04	-1.020162e-01	6.236514e-01		 0	 0	FALSE	FALSE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4902313	0.4741862	U	0.4686274	0.6162291
13773	129	184202	184203	1	  34	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.458692	3.221318	1.0870502	-	-	-	hypothetical protein	1.476490	3.206261	1.1041831	499	S-adenosylhomocysteine hydrolase	H	adenosylhomocysteinase	 0.000000e+00	 0	3.167651e-04	 1.831756e-04	 2.434364e-02	 5.381760e-02	2.824876e-02		 0	41	FALSE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187635	0.6339124	U	0.4686274	0.6162291
13773	129	184203	184204	1	 168	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.476490	3.206261	1.1041831	499	S-adenosylhomocysteine hydrolase	H	adenosylhomocysteinase	1.416475	3.150911	1.0549748	-	-	-	hypothetical protein	 0.000000e+00	 0	3.601768e-03	-8.763273e-04	 1.198828e-02	-8.275725e-02	3.375227e-01		41	 0	 TRUE	FALSE	102	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4972060	0.5282099	U	0.4686274	0.6162291
13773	129	184204	184205	1	 837	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.416475	3.150911	1.0549748	-	-	-	hypothetical protein	1.480385	3.138291	1.0444649	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	 0.000000e+00	 0	4.084521e-03	-1.012351e-03	 7.939229e-03	-9.178182e-02	3.807354e-01		 0	13	 TRUE	FALSE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4948416	0.5167658	U	0.4686274	0.6162291
13773	129	184205	184206	1	   2	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.480385	3.138291	1.0444649	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	1.439746	3.193538	1.0463715	1318	Predicted transcriptional regulators	K	conserved hypothetical protein	 2.394346e-02	 1	1.651514e-03	-3.376609e-04	 1.499955e-02	-4.504629e-03	1.437358e-01	0	13	 1	FALSE	FALSE	102	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7020387	0.5197274	0.5944258	N	0.5492530	0.5604716
13773	129	184206	184207	1	  -9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.439746	3.193538	1.0463715	1318	Predicted transcriptional regulators	K	conserved hypothetical protein	1.416526	3.088685	1.0431896	3382	Uncharacterized conserved protein	S	conserved hypothetical protein	 5.631536e-04	 1	5.391642e-04	 4.060765e-04	 2.822840e-02	 3.062771e-03	5.623777e-02		 1	 3	FALSE	FALSE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.5197160	0.6216788	U	0.4686274	0.6162291
13773	129	184207	184208	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.416526	3.088685	1.0431896	3382	Uncharacterized conserved protein	S	conserved hypothetical protein	1.432177	3.076001	1.0617002	2403	Predicted GTPase	R	conserved hypothetical protein	 2.897430e-03	 3	2.449338e-04	 6.700002e-04	 2.642205e-02	 2.239651e-02	2.548225e-02		 3	 5	FALSE	FALSE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5139075	0.5175067	0.6352777	U	0.4686274	0.6162291
13773	129	184208	184209	1	 104	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.432177	3.076001	1.0617002	2403	Predicted GTPase	R	conserved hypothetical protein	1.388633	2.987831	1.0466462	-	-	-	hypothetical protein	 0.000000e+00	 0	1.896081e-03	 1.206009e-03	 4.390366e-02	 4.589562e-02	1.775235e-01		 5	 0	 TRUE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5186126	0.5856408	U	0.4686274	0.6162291
13773	129	184209	184210	1	 -38	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.388633	2.987831	1.0466462	-	-	-	hypothetical protein	1.559367	3.419296	1.1085914	-	-	-	hypothetical protein	 0.000000e+00	 0	2.915015e-02	-6.776465e-03	-3.889079e-02	-3.954084e-01	1.650525e+00		 0	 0	FALSE	FALSE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4201626	0.4132931	U	0.4686274	0.6162291
13773	129	184210	184211	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.559367	3.419296	1.1085914	-	-	-	hypothetical protein	1.311572	2.841565	1.0152027	1651	Protein-disulfide isomerase	O	thiol:disulphide interchange protein, putative	 0.000000e+00	 0	6.140206e-02	-1.509697e-02	-1.357401e-01	-7.112602e-01	2.866304e+00		 0	 0	 TRUE	FALSE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3860542	0.4013896	U	0.4686274	0.6162291
13773	129	184211	184212	1	 115	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.311572	2.841565	1.0152027	1651	Protein-disulfide isomerase	O	thiol:disulphide interchange protein, putative	1.330626	2.894609	1.0073830	5494	Predicted thioredoxin/glutaredoxin	O	conserved hypothetical protein	 0.000000e+00	 0	3.630559e-04	 1.688561e-02	 2.055597e-01	 7.973453e-01	2.723510e-03	O	 0	 1	 TRUE	FALSE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7847151	0.6489041	Y	1.4497162	0.7118045
13773	129	184212	184213	1	  74	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.330626	2.894609	1.0073830	5494	Predicted thioredoxin/glutaredoxin	O	conserved hypothetical protein	1.312369	2.834289	1.0135409	209	Ribonucleotide reductase, alpha subunit	F	ribonucleotide reductase	 1.233696e-02	 1	3.333435e-04	 1.678944e-02	 2.290898e-01	 7.953486e-01	2.488501e-03	0	 1	44	FALSE	FALSE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.6186769	0.7833110	0.6493745	N	0.5492530	0.6245624
13773	129	184213	184214	1	  52	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.312369	2.834289	1.0135409	209	Ribonucleotide reductase, alpha subunit	F	ribonucleotide reductase	1.468302	3.688066	1.2412352	-	-	-	hypothetical protein	 0.000000e+00	 0	2.431514e-02	-2.350766e-03	-5.510489e-02	-2.315661e-01	1.367984e+00		44	 0	FALSE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4564630	0.4212714	U	0.4686274	0.6162291
13773	129	184214	184215	1	  35	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.468302	3.688066	1.2412352	-	-	-	hypothetical protein	1.682625	3.641870	1.0950847	-	-	-	hypothetical protein	 0.000000e+00	 0	4.593457e-02	 3.909924e-03	 2.015113e-01	 2.424177e-01	5.006947e-01		 0	 0	FALSE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5662244	0.4924234	U	0.4686274	0.6162291
13773	129	184215	184216	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.682625	3.641870	1.0950847	-	-	-	hypothetical protein	1.420697	3.038400	1.0403705	172	Seryl-tRNA synthetase	J	seryl-tRNA synthetase	 0.000000e+00	 0	6.860645e-02	-7.097856e-03	-1.956434e-01	-2.026288e-01	1.371577e+00		 0	64	FALSE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4633764	0.4208351	U	0.4686274	0.6162291
13773	129	184216	184217	1	 113	Convergent	+	-	 0.000000	0	  0.000000	 -2.89871580	1.420697	3.038400	1.0403705	172	Seryl-tRNA synthetase	J	seryl-tRNA synthetase	1.504439	3.336620	1.1124236	528	Uridylate kinase	F	uridylate kinase (pyrH)	 1.223715e-02	23	7.012648e-03	-1.628281e-03	 6.452395e-03	-1.130575e-01	5.576181e-01	0	64	23	FALSE	FALSE	107	FALSE	0.4469764	0.1914758	0.5480306	0.4469764	0.7771174	0.6167113	0.4875691	0.4828600	N	0.5492530	0.5316343
13773	129	184217	184218	1	 -16	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.504439	3.336620	1.1124236	528	Uridylate kinase	F	uridylate kinase (pyrH)	1.505261	3.144117	1.0561639	-	-	-	hypothetical protein	 0.000000e+00	 0	6.758436e-07	 2.857467e-03	 5.437120e-02	 2.886049e-01	9.423910e-06		23	 0	 TRUE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5883956	0.6557762	U	0.4686274	0.6162291
13773	129	184218	184219	1	 249	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.505261	3.144117	1.0561639	-	-	-	hypothetical protein	1.504823	3.103619	1.0277689	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	HIT family protein	 0.000000e+00	 0	1.916896e-07	 2.878167e-03	 5.427072e-02	 2.894319e-01	2.355978e-06		 0	43	 TRUE	FALSE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5893811	0.6559187	U	0.4686274	0.6162291
13773	129	184219	184220	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.504823	3.103619	1.0277689	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	HIT family protein	1.499631	3.394702	1.1496449	2771	DNA-binding HTH domain-containing proteins	K	regulatory protein, luxR family, conjectural	 0.000000e+00	 0	2.696032e-05	 2.577347e-03	 4.953216e-02	 2.717031e-01	9.900996e-04		43	 0	FALSE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5804334	0.6518633	U	0.4686274	0.6162291
13773	129	184220	184221	1	  -7	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.499631	3.394702	1.1496449	2771	DNA-binding HTH domain-containing proteins	K	regulatory protein, luxR family, conjectural	1.402085	3.025718	1.0510088	12	Predicted GTPase, probable translation factor	J	GTP binding protein, putative	 0.000000e+00	 0	9.515148e-03	-2.378501e-03	-6.807319e-03	-2.002840e-01	8.131804e-01	0	 0	12	FALSE	FALSE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4646726	0.4538896	N	0.5492530	0.6245624
13773	129	184221	184222	1	 142	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.402085	3.025718	1.0510088	12	Predicted GTPase, probable translation factor	J	GTP binding protein, putative	1.455600	2.921928	1.0705017	-	-	-	paREP2a	 0.000000e+00	 0	2.863838e-03	-2.074367e-04	 1.218301e-02	-5.349012e-02	2.820482e-01		12	 0	 TRUE	FALSE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5057814	0.5503270	U	0.4686274	0.6162291
13773	129	184222	184223	1	  67	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.455600	2.921928	1.0705017	-	-	-	paREP2a	1.467061	3.437780	1.1577445	-	-	-	hypothetical protein	 0.000000e+00	 0	1.313523e-04	 6.591427e-05	 2.208684e-02	 3.255019e-02	1.121681e-02		 0	 0	FALSE	FALSE	107	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174404	0.6422810	U	0.4686274	0.6162291
13773	129	184223	184224	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.467061	3.437780	1.1577445	-	-	-	hypothetical protein	1.391745	3.052555	1.0953250	517	FOG: CBS domain	R	conserved protein with 7 CBS domains	 0.000000e+00	 0	5.672433e-03	-9.345523e-04	 1.822242e-02	-1.172546e-01	5.293316e-01		 0	 1	FALSE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4858098	0.4876243	U	0.4686274	0.6162291
13773	129	184224	184225	1	  34	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.391745	3.052555	1.0953250	517	FOG: CBS domain	R	conserved protein with 7 CBS domains	1.382780	2.937207	1.0434724	464	ATPases of the AAA+ class	O	AAA family ATPase, possible cell division control protein cdc48	 3.085292e-02	 1	8.037863e-05	 4.092612e-03	 7.150987e-02	 2.737187e-01	5.772734e-03		 1	 8	FALSE	FALSE	109	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7379657	0.5818594	0.6458271	U	0.4686274	0.5517368
13773	129	184225	184226	1	  31	Same	+	+	 7.599902	0	 12.590335	 12.39492775	1.382780	2.937207	1.0434724	464	ATPases of the AAA+ class	O	AAA family ATPase, possible cell division control protein cdc48	1.230858	2.439416	0.8632980	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein, hsp20 homolog, conjectural	 1.398539e-01	 6	2.308010e-02	 1.513155e-02	 3.092148e-01	 5.599576e-01	1.873568e-01	O	 8	 6	FALSE	FALSE	110	 TRUE	2.7176749	1.8698150	0.5480306	2.6936340	0.7537284	1.0797335	0.7031812	0.5834990	Y	1.4497162	0.9151959
13773	129	184226	184227	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.230858	2.439416	0.8632980	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein, hsp20 homolog, conjectural	1.436517	2.987451	1.0111472	4345	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 1.150801e-03	 1	4.229541e-02	 3.280670e-03	-6.385199e-02	 4.812732e-02	8.968948e-01		 6	 1	FALSE	FALSE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4759583	0.5187480	0.4466307	U	0.4686274	0.6162291
13773	129	184227	184228	1	  66	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.436517	2.987451	1.0111472	4345	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.385898	2.935045	1.0166277	1818	Predicted RNA-binding protein, contains THUMP domain	R	conserved hypothetical protein	 9.520652e-04	 1	2.562248e-03	 9.742980e-04	 4.246082e-02	 2.627151e-02	2.450364e-01		 1	 5	 TRUE	FALSE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4684288	0.5173835	0.5644275	U	0.4686274	0.6162291
13773	129	184228	184229	1	  67	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.385898	2.935045	1.0166277	1818	Predicted RNA-binding protein, contains THUMP domain	R	conserved hypothetical protein	1.507354	3.485963	1.1456664	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	 0.000000e+00	 0	1.475147e-02	-3.665145e-03	-2.505675e-02	-2.994118e-01	1.197706e+00		 5	 0	FALSE	FALSE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4403971	0.4280077	U	0.4686274	0.6162291
13773	129	184229	184230	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.507354	3.485963	1.1456664	-	-	-	conserved within P. aerophilum part 1, authentic frameshift	1.381049	3.056561	1.0574568	-	-	-	conserved within P. aerophilum part 2, authentic frameshift	 0.000000e+00	 0	1.595286e-02	-3.936499e-03	-2.067571e-02	-3.171735e-01	1.269297e+00		 0	 0	FALSE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4357063	0.4255677	U	0.4686274	0.6162291
13773	129	184230	184231	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.381049	3.056561	1.0574568	-	-	-	conserved within P. aerophilum part 2, authentic frameshift	1.488658	3.301205	1.1054218	100	Ribosomal protein S11	J	ribosomal protein S11	 0.000000e+00	 0	1.157968e-02	-2.621377e-03	-1.895162e-02	-2.491446e-01	1.016955e+00		 0	60	FALSE	FALSE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4523237	0.4380418	U	0.4686274	0.6162291
13773	129	184231	184232	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.488658	3.301205	1.1054218	100	Ribosomal protein S11	J	ribosomal protein S11	1.289877	2.739050	0.9402393	-	-	-	hypothetical protein	 0.000000e+00	 0	3.951399e-02	-6.018942e-03	 1.308510e-02	-4.172342e-01	1.950985e+00		60	 0	FALSE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4158865	0.4088885	U	0.4686274	0.6162291
13773	129	184232	184233	1	 280	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.289877	2.739050	0.9402393	-	-	-	hypothetical protein	1.506759	3.266681	1.1208456	-	-	-	hypothetical protein	 0.000000e+00	 0	4.703794e-02	-8.942552e-03	-1.422856e-01	-5.296803e-01	2.290472e+00		 0	 0	FALSE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4009738	0.4051162	U	0.4686274	0.6162291
13773	129	184233	184234	1	 174	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.506759	3.266681	1.1208456	-	-	-	hypothetical protein	1.519897	3.650520	1.1682990	-	-	-	hypothetical protein	 0.000000e+00	 0	1.726097e-04	 3.792843e-03	 6.921754e-02	 3.399063e-01	4.770855e-03		 0	 0	FALSE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6082095	0.6465274	U	0.4686274	0.6162291
13773	129	184234	184235	1	 135	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.519897	3.650520	1.1682990	-	-	-	hypothetical protein	1.293049	2.679728	0.9235114	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme homolog	 0.000000e+00	 0	5.146020e-02	-1.084727e-02	-5.433655e-02	-5.924624e-01	2.484918e+00		 0	19	 TRUE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3949798	0.4034139	U	0.4686274	0.6162291
13773	129	184235	184236	1	1337	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.293049	2.679728	0.9235114	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme homolog	1.449543	3.363205	1.0714188	-	-	-	paREP9, associated with SRSRs	 0.000000e+00	 0	2.449029e-02	 2.929696e-04	-3.950074e-02	-7.571170e-02	1.075033e+00		19	 0	FALSE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4993948	0.4346034	U	0.4686274	0.6162291
13773	129	184236	184237	1	 304	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.449543	3.363205	1.0714188	-	-	-	paREP9, associated with SRSRs	1.305066	2.876730	0.9604123	1392	Phosphate transport regulator (distant homolog of PhoU)	P	conserved hypothetical protein	 0.000000e+00	 0	2.087352e-02	 2.707356e-04	 7.826939e-02	-7.370970e-02	1.023156e+00		 0	 1	FALSE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5002603	0.4376225	U	0.4686274	0.6162291
13773	129	184237	184238	1	   0	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.305066	2.876730	0.9604123	1392	Phosphate transport regulator (distant homolog of PhoU)	P	conserved hypothetical protein	1.289436	3.306934	1.1122991	-	-	-	hypothetical protein	 0.000000e+00	 0	2.442855e-04	 2.369861e-02	 3.100647e-01	 9.009759e-01	1.140293e-03		 1	 0	FALSE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8051477	0.6516922	U	0.4686274	0.6162291
13773	129	184238	184239	1	 -43	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.289436	3.306934	1.1122991	-	-	-	hypothetical protein	1.291991	2.706677	0.9534978	2220	Predicted Zn-dependent hydrolases of the beta-lactamase fold	R	conserved hypothetical protein	 0.000000e+00	 0	6.525048e-06	 2.581622e-02	 3.205036e-01	 9.261884e-01	5.889944e-05		 0	12	FALSE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8075593	0.6554240	U	0.4686274	0.6162291
13773	129	184239	184240	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.291991	2.706677	0.9534978	2220	Predicted Zn-dependent hydrolases of the beta-lactamase fold	R	conserved hypothetical protein	1.225556	2.574828	0.9671999	-	-	-	paREP4	 0.000000e+00	 0	4.413630e-03	 3.599895e-02	 5.066423e-01	 9.563502e-01	1.531974e-03		12	 0	 TRUE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8128897	0.6509568	U	0.4686274	0.6162291
13773	129	184240	184241	1	  84	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.225556	2.574828	0.9671999	-	-	-	paREP4	1.302983	3.136687	1.1831902	-	-	-	hypothetical protein	 0.000000e+00	 0	5.995008e-03	 3.351648e-02	 3.390344e-01	 9.372079e-01	3.402032e-03		 0	 0	 TRUE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8090097	0.6479144	U	0.4686274	0.6162291
13773	129	184241	184242	1	  22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.302983	3.136687	1.1831902	-	-	-	hypothetical protein	1.581845	3.549597	1.1261322	-	-	-	possible heat shock protein, htpX homolog part 1, authentic frameshift	 0.000000e+00	 0	7.776397e-02	-1.936037e-02	-2.183464e-01	-7.800453e-01	3.132058e+00		 0	 0	FALSE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3839157	0.4007062	U	0.4686274	0.6162291
13773	129	184242	184243	1	 -88	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.581845	3.549597	1.1261322	-	-	-	possible heat shock protein, htpX homolog part 1, authentic frameshift	1.268375	2.925977	0.9623850	501	Zn-dependent protease with chaperone function	O	possible heat shock protein, htpX homolog part 2, authentic frameshift	 0.000000e+00	 0	9.826318e-02	-2.387501e-02	-2.165704e-01	-8.138218e-01	3.277684e+00		 0	 1	FALSE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3822468	0.4001595	U	0.4686274	0.6162291
13773	129	184243	184244	1	 301	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.268375	2.925977	0.9623850	501	Zn-dependent protease with chaperone function	O	possible heat shock protein, htpX homolog part 2, authentic frameshift	1.406811	3.130187	1.0351043	1502	Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes	I	hypothetical protein	 0.000000e+00	 0	1.916451e-02	 8.159211e-03	 3.612288e-02	 3.339528e-01	4.086967e-01	0	 1	 0	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6060641	0.5107204	N	0.5492530	0.6245624
13773	129	184244	184245	1	  -9	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.406811	3.130187	1.0351043	1502	Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes	I	hypothetical protein	1.579262	3.579866	1.1566054	-	-	-	hypothetical protein	 0.000000e+00	 0	2.973912e-02	-5.700591e-03	-9.440504e-03	-2.808655e-01	1.357234e+00		 0	 0	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4450675	0.4220582	U	0.4686274	0.6162291
13773	129	184245	184246	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.579262	3.579866	1.1566054	-	-	-	hypothetical protein	1.591928	3.550915	1.1348918	1205	Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	R	ATP-dependant helicase, probable	 0.000000e+00	 0	1.604339e-04	 1.797004e-02	 2.394819e-01	 7.021638e-01	7.633367e-04		 0	 0	 TRUE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7523075	0.6522016	U	0.4686274	0.6162291
13773	129	184246	184247	1	 180	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.591928	3.550915	1.1348918	1205	Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	R	ATP-dependant helicase, probable	1.569285	3.460295	1.1003848	1194	A/G-specific DNA glycosylase	L	U/G & T/G mismatch specific glycosylase (Pa-MIG)	 0.000000e+00	 0	5.127123e-04	 1.656793e-02	 1.995944e-01	 6.832041e-01	2.488501e-03		 0	 4	 TRUE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7478892	0.6493745	U	0.4686274	0.6162291
13773	129	184247	184248	1	  41	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.569285	3.460295	1.1003848	1194	A/G-specific DNA glycosylase	L	U/G & T/G mismatch specific glycosylase (Pa-MIG)	1.666672	3.662900	1.0837883	-	-	-	conserved protein	 7.562104e-04	 1	9.484317e-03	 2.537968e-02	 3.998827e-01	 7.601415e-01	2.126270e-02		 4	 1	 TRUE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4649491	0.7708079	0.6369786	U	0.4686274	0.6162291
13773	129	184248	184249	1	  -9	Convergent	+	-	 2.079442	0	  2.079442	  2.07944154	1.666672	3.662900	1.0837883	-	-	-	conserved protein	1.485343	3.215848	1.0901599	270	Site-specific DNA methylase	L	C-5 cytosine-specific DNA methylase	 7.158483e-02	 1	3.288009e-02	 7.308866e-03	-8.571857e-03	 3.891633e-01	2.886073e-01		 1	 1	FALSE	FALSE	119	FALSE	2.9335626	1.6614134	0.5480306	2.9479804	0.6329203	0.9205230	0.6300024	0.5474398	U	0.4686274	0.8396881
13773	129	184249	184250	1	 463	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.485343	3.215848	1.0901599	270	Site-specific DNA methylase	L	C-5 cytosine-specific DNA methylase	1.339755	2.919897	0.9677810	-	-	-	hypothetical protein	 0.000000e+00	 0	2.119598e-02	-3.790172e-03	 5.144675e-03	-3.422116e-01	1.547666e+00		 1	 0	 TRUE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4292359	0.4156630	U	0.4686274	0.6162291
13773	129	184250	184251	1	 121	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.339755	2.919897	0.9677810	-	-	-	hypothetical protein	1.452452	3.144079	1.0770866	675	Transposase and inactivated derivatives	L	hypothetical protein	 0.000000e+00	 0	1.270066e-02	-1.182732e-04	-1.229223e-02	-9.019036e-02	8.867482e-01		 0	 0	FALSE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4951475	0.4480717	U	0.4686274	0.6162291
13773	129	184251	184252	1	 -13	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.452452	3.144079	1.0770866	675	Transposase and inactivated derivatives	L	hypothetical protein	1.314740	3.010477	1.0018399	433	Predicted ATPase	R	hypothetical protein	 0.000000e+00	 0	1.896458e-02	-1.447747e-04	 6.646464e-02	-9.832908e-02	1.034053e+00		 0	 0	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4920561	0.4366685	U	0.4686274	0.6162291
13773	129	184252	184253	1	 -25	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.314740	3.010477	1.0018399	433	Predicted ATPase	R	hypothetical protein	1.331367	3.121290	1.0162919	-	-	-	hypothetical protein	 0.000000e+00	 0	2.764338e-04	 1.640188e-02	 2.016754e-01	 7.866327e-01	1.847086e-03		 0	 0	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7809774	0.6505622	U	0.4686274	0.6162291
13773	129	184253	184254	1	  50	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.331367	3.121290	1.0162919	-	-	-	hypothetical protein	1.443733	3.064275	1.0280045	-	-	-	paREP8	 0.000000e+00	 0	1.262627e-02	 9.193442e-04	-4.948989e-03	-2.059596e-02	7.911850e-01		 0	 0	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5151498	0.4567559	U	0.4686274	0.6162291
13773	129	184254	184255	1	 123	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.443733	3.064275	1.0280045	-	-	-	paREP8	1.315532	2.908415	1.0229206	-	-	-	paREP8	 0.000000e+00	 0	1.643557e-02	 1.040630e-03	 7.963070e-02	-2.154542e-02	8.637727e-01		 0	 0	FALSE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5146731	0.4489519	U	0.4686274	0.6162291
13773	129	184255	184256	1	 332	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.315532	2.908415	1.0229206	-	-	-	paREP8	1.449023	3.182522	1.1040472	1396	Predicted transcriptional regulators	K	helix-turn-helix protein	 0.000000e+00	 0	1.781994e-02	 3.219154e-04	-2.235879e-02	-6.741630e-02	9.604903e-01		 0	 1	FALSE	FALSE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5015939	0.4421694	U	0.4686274	0.6162291
13773	129	184256	184257	1	  -3	Same	+	+	 2.662588	0	  2.662588	  2.66258783	1.449023	3.182522	1.1040472	1396	Predicted transcriptional regulators	K	helix-turn-helix protein	1.401844	3.543728	1.1875777	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	 3.279005e-02	 1	2.225920e-03	 1.174041e-04	 2.833094e-02	-2.970888e-02	2.242237e-01		 1	 7	FALSE	FALSE	125	 TRUE	2.9244472	1.7076796	0.5480306	2.9399224	0.6329203	0.7581838	0.5120718	0.5729102	U	0.4686274	0.8476113
13773	129	184257	184258	1	   8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.401844	3.543728	1.1875777	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved hypothetical protein	1.289003	2.531850	1.1098962	-	-	-	hypothetical protein	 0.000000e+00	 0	1.273297e-02	 8.046257e-03	 1.755498e-01	 3.859091e-01	3.225333e-01		 7	 0	FALSE	FALSE	126	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6282261	0.5340554	U	0.4686274	0.6162291
13773	129	184258	184259	1	  90	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.289003	2.531850	1.1098962	-	-	-	hypothetical protein	1.427164	3.123311	1.0689463	1408	Predicted phosphohydrolases	R	conserved hypothetical protein	 0.000000e+00	 0	1.908850e-02	 3.934443e-03	 1.263254e-03	 1.432317e-01	6.705636e-01		 0	 9	 TRUE	FALSE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5284194	0.4684793	U	0.4686274	0.6162291
13773	129	184259	184260	1	  35	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.427164	3.123311	1.0689463	1408	Predicted phosphohydrolases	R	conserved hypothetical protein	1.579449	3.543673	1.1011201	2430	Uncharacterized conserved protein	S	conserved hypothetical protein	 7.220042e-03	 4	2.319063e-02	-3.102602e-03	 2.461438e-02	-1.223153e-01	9.484936e-01		 9	 4	FALSE	FALSE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.5709489	0.4843873	0.4427224	U	0.4686274	0.6162291
13773	129	184260	184261	1	   4	Same	+	+	 6.788972	0	  8.986196	  8.98619632	1.579449	3.543673	1.1011201	2430	Uncharacterized conserved protein	S	conserved hypothetical protein	1.575039	3.587653	1.1515095	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein	 8.869744e-02	 4	1.944811e-05	 1.583368e-02	 2.030507e-01	 6.730510e-01	1.154429e-04		 4	16	FALSE	FALSE	127	 TRUE	2.7603339	1.8272121	0.5480306	2.7859285	0.7323301	0.9756975	0.7443823	0.6549470	U	0.4686274	0.8685996
13773	129	184261	184262	1	 492	Convergent	+	-	 0.000000	0	  0.000000	 -0.25131443	1.575039	3.587653	1.1515095	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein	1.422781	3.111566	1.0714167	116	Predicted N6-adenine-specific DNA methylase	L	conserved hypothetical protein	 6.289505e-03	 5	2.318249e-02	-3.537729e-03	-5.737256e-02	-1.595056e-01	1.021604e+00	0	16	 5	FALSE	FALSE	128	FALSE	0.4469764	0.2639739	0.5480306	0.4469764	0.7448207	0.5613206	0.4743375	0.4378021	N	0.5492530	0.5545514
13773	129	184262	184263	1	  60	Divergent	-	+	 0.000000	0	  0.000000	 -0.43227637	1.422781	3.111566	1.0714167	116	Predicted N6-adenine-specific DNA methylase	L	conserved hypothetical protein	1.390970	3.087344	1.0966105	1855	ATPase (PilT family)	R	conserved hypothetical protein	 8.674503e-02	 5	1.011968e-03	 1.728808e-03	 4.814411e-02	 9.717524e-02	9.050724e-02		 5	10	 TRUE	FALSE	127	FALSE	0.4469764	0.2388166	0.5480306	0.4469764	0.7448207	0.9589571	0.5182994	0.6107212	U	0.4686274	0.5378371
13773	129	184263	184264	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.390970	3.087344	1.0966105	1855	ATPase (PilT family)	R	conserved hypothetical protein	1.422925	3.197382	1.0858670	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	 6.018027e-03	 3	1.021172e-03	 1.720086e-03	 3.363578e-02	 9.679416e-02	9.096960e-02		10	 3	FALSE	FALSE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7136133	0.5568314	0.5182191	0.6104368	U	0.4686274	0.6162291
13773	129	184264	184265	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	 -0.31575091	1.422925	3.197382	1.0858670	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	1.429564	3.215262	1.1032080	1234	Metal-dependent hydrolases of the beta-lactamase superfamily III	R	conserved hypothetical protein	 2.566662e-02	 3	4.406590e-05	 6.214177e-04	 2.715559e-02	 2.393673e-02	5.204355e-03		 3	40	FALSE	FALSE	129	FALSE	0.4469764	0.2514250	0.5480306	0.4469764	0.7136133	0.7147639	0.5174088	0.6462385	U	0.4686274	0.5418278
13773	129	184265	184266	1	   4	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.429564	3.215262	1.1032080	1234	Metal-dependent hydrolases of the beta-lactamase superfamily III	R	conserved hypothetical protein	1.557068	3.290218	1.0890557	-	-	-	paREP2b	 0.000000e+00	 0	1.625731e-02	-2.306795e-03	 2.091513e-02	-9.405063e-02	7.898203e-01		40	 0	 TRUE	FALSE	128	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4941157	0.4568835	U	0.4686274	0.6162291
13773	129	184266	184267	1	  40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.557068	3.290218	1.0890557	-	-	-	paREP2b	1.818023	4.007245	1.2029166	-	-	-	paREP2b	 0.000000e+00	 0	6.809780e-02	 3.874370e-02	 7.867363e-01	 7.606344e-01	5.160533e-02		 0	 0	 TRUE	FALSE	127	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7712666	0.6233610	U	0.4686274	0.6162291
13773	129	184267	184268	1	  57	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.818023	4.007245	1.2029166	-	-	-	paREP2b	1.408775	3.191657	1.0823122	30	Dimethyladenosine transferase (rRNA methylation)	J	dimethyladenosine transferase	 0.000000e+00	 0	1.674845e-01	-1.562509e-02	-4.986984e-01	-3.223932e-01	1.736408e+00		 0	14	 TRUE	FALSE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4349384	0.4117409	U	0.4686274	0.6162291
13773	129	184268	184269	1	  33	Divergent	-	+	 0.000000	0	  0.000000	 -0.11778304	1.408775	3.191657	1.0823122	30	Dimethyladenosine transferase (rRNA methylation)	J	dimethyladenosine transferase	1.369707	2.976300	1.0636306	2511	Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	Glu-tRNA(Gln) amidotransferase subunit B (gatB)	 8.277205e-03	12	1.526275e-03	 3.481286e-03	 7.377434e-02	 2.140152e-01	1.119655e-01	J	14	12	 TRUE	FALSE	125	FALSE	0.4469764	0.2945188	0.5480306	0.4469764	0.7776747	0.5822313	0.5548426	0.6025456	Y	1.4497162	0.6577314
13773	129	184269	184270	1	 221	Same	+	+	 0.000000	0	  0.000000	 -0.31285006	1.369707	2.976300	1.0636306	2511	Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	Glu-tRNA(Gln) amidotransferase subunit B (gatB)	1.550109	3.384570	1.1454055	2174	Ribosomal protein L34E	J	ribosomal protein L34	 1.689996e-01	 6	3.254489e-02	-8.063712e-03	-6.574316e-02	-4.892500e-01	1.963870e+00	J	12	 6	FALSE	FALSE	126	 TRUE	0.4469764	0.2537346	0.5480306	0.4469764	0.7537284	1.1107342	0.4066353	0.4085563	Y	1.4497162	0.6459393
13773	129	184270	184271	1	   6	Same	+	+	15.747322	0	 18.409910	 18.40990961	1.550109	3.384570	1.1454055	2174	Ribosomal protein L34E	J	ribosomal protein L34	1.531463	3.455825	1.1313152	1102	Cytidylate kinase	F	cytidylate kinase (cmk)	 1.449806e-01	 6	3.476887e-04	 7.904216e-03	 1.046900e-01	 5.097540e-01	3.053347e-03	0	 6	15	FALSE	FALSE	127	 TRUE	2.5422285	1.9048547	0.5480306	2.6264658	0.7537284	1.0836851	0.6767763	0.6486369	N	0.5492530	0.8859462
13773	129	184271	184272	1	  54	Same	+	+	 0.000000	0	  0.000000	 -0.19068981	1.531463	3.455825	1.1313152	1102	Cytidylate kinase	F	cytidylate kinase (cmk)	1.389190	3.001499	1.0577135	493	NADPH-dependent glutamate synthase beta chain and related oxidoreductases	ER	glutamate synthase small subunit gltD	 1.265355e-02	 4	2.024162e-02	-4.980599e-03	-4.395224e-02	-3.479190e-01	1.424203e+00		15	 4	FALSE	FALSE	128	 TRUE	0.4469764	0.2733593	0.5480306	0.4469764	0.7323301	0.6206531	0.4284314	0.4192722	U	0.4686274	0.5487570
13773	129	184272	184273	1	   1	Convergent	+	-	 0.000000	0	  0.000000	 -0.19068981	1.389190	3.001499	1.0577135	493	NADPH-dependent glutamate synthase beta chain and related oxidoreductases	ER	glutamate synthase small subunit gltD	1.422372	2.968446	1.0133451	1889	Fibrillarin-like rRNA methylase	J	fibrillarin-like pre-rRNA processing protein (flpA)	 1.782262e-02	 4	1.101065e-03	 1.805183e-03	 3.415725e-02	 1.014602e-01	9.376850e-02		 4	12	FALSE	FALSE	129	FALSE	0.4469764	0.2733593	0.5480306	0.4469764	0.7323301	0.6602470	0.5189674	0.6094409	U	0.4686274	0.5487570
13773	129	184273	184274	1	 228	Same	-	-	17.903724	0	 26.172931	 26.17293092	1.422372	2.968446	1.0133451	1889	Fibrillarin-like rRNA methylase	J	fibrillarin-like pre-rRNA processing protein (flpA)	1.400475	3.106283	1.0811587	1498	Protein implicated in ribosomal biogenesis, Nop56p homolog	J	nop family pre-rRNA processing protein	 2.029016e-01	 7	4.794996e-04	 1.477688e-03	 4.246055e-02	 8.316660e-02	4.617716e-02	J	12	 7	 TRUE	FALSE	128	 TRUE	2.4985447	1.9488255	0.5480306	2.5004783	0.7596462	1.1426046	0.5176948	0.6255200	Y	1.4497162	0.9246054
13773	129	184274	184275	1	 585	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.400475	3.106283	1.0811587	1498	Protein implicated in ribosomal biogenesis, Nop56p homolog	J	nop family pre-rRNA processing protein	1.520513	3.475730	1.1155995	-	-	-	paREP1	 0.000000e+00	 0	1.440920e-02	-3.519473e-03	-1.486438e-02	-2.600151e-01	1.084603e+00		 7	 0	 TRUE	FALSE	127	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4503522	0.4341358	U	0.4686274	0.6162291
13773	129	184275	184276	1	  28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.520513	3.475730	1.1155995	-	-	-	paREP1	1.431418	3.113628	1.0966771	1680	Beta-lactamase class C and other penicillin binding proteins	V	beta-lactamase-like protein	 0.000000e+00	 0	7.937856e-03	-1.380645e-03	-6.524684e-03	-6.199991e-02	5.259867e-01		 0	12	FALSE	FALSE	128	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5033352	0.4884610	U	0.4686274	0.6162291
13773	129	184276	184277	1	   3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.431418	3.113628	1.0966771	1680	Beta-lactamase class C and other penicillin binding proteins	V	beta-lactamase-like protein	1.397059	2.970651	1.0415748	468	RecA/RadA recombinase	L	DNA repair protein radA	 0.000000e+00	 0	1.180541e-03	 1.085291e-03	 3.991098e-02	 4.460042e-02	1.235498e-01	0	12	 0	 TRUE	FALSE	127	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5185203	0.5998031	N	0.5492530	0.6245624
13773	129	184277	184278	1	  21	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.397059	2.970651	1.0415748	468	RecA/RadA recombinase	L	DNA repair protein radA	1.539564	3.471661	1.1301969	-	-	-	hypothetical protein	 0.000000e+00	 0	2.030771e-02	-4.790676e-03	-2.303052e-02	-3.205007e-01	1.350091e+00		 0	 0	 TRUE	FALSE	126	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4353229	0.4223570	U	0.4686274	0.6162291
13773	129	184278	184279	1	 151	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.539564	3.471661	1.1301969	-	-	-	hypothetical protein	1.494636	3.193502	1.0705636	-	-	-	hypothetical protein	 0.000000e+00	 0	2.018561e-03	 3.812815e-03	 5.032429e-02	 3.352427e-01	5.770319e-02		 0	 0	 TRUE	FALSE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6071342	0.6211938	U	0.4686274	0.6162291
13773	129	184279	184280	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.494636	3.193502	1.0705636	-	-	-	hypothetical protein	1.388319	3.216019	1.0643878	3432	Predicted transcriptional regulator	K	conserved hypothetical protein	 0.000000e+00	 0	1.130330e-02	-2.727512e-03	-5.798989e-03	-2.423005e-01	9.710492e-01		 0	 0	FALSE	FALSE	126	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4532947	0.4416178	U	0.4686274	0.6162291
13773	129	184280	184281	1	 -19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.388319	3.216019	1.0643878	3432	Predicted transcriptional regulator	K	conserved hypothetical protein	1.418570	3.264204	1.1012242	-	-	-	hypothetical protein	 0.000000e+00	 0	9.151334e-04	 2.070253e-03	 3.757660e-02	 1.191771e-01	7.976398e-02		 0	 0	 TRUE	FALSE	125	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5218559	0.6145887	U	0.4686274	0.6162291
13773	129	184281	184282	1	 173	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.418570	3.264204	1.1012242	-	-	-	hypothetical protein	1.356040	3.031479	1.0524729	1192	ATPases involved in chromosome partitioning	D	chromosome partitioning ATPase, parA family protein, conjectural	 0.000000e+00	 0	3.909977e-03	 3.129724e-03	 7.768488e-02	 1.728958e-01	2.643996e-01		 0	 7	 TRUE	FALSE	124	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5393239	0.5555494	U	0.4686274	0.6162291
13773	129	184282	184283	1	 143	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.356040	3.031479	1.0524729	1192	ATPases involved in chromosome partitioning	D	chromosome partitioning ATPase, parA family protein, conjectural	1.484735	3.159861	1.0512125	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.656227e-02	-3.179241e-03	-3.670121e-02	-3.034264e-01	1.328774e+00		 7	 0	FALSE	FALSE	125	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4394742	0.4230623	U	0.4686274	0.6162291
13773	129	184283	184284	1	  41	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.484735	3.159861	1.0512125	-	-	-	conserved within P. aerophilum	1.404632	2.995427	1.0251844	1247	Sortase and related acyltransferases	M	conserved hypothetical protein	 0.000000e+00	 0	6.416523e-03	-1.559112e-03	 5.237895e-03	-1.492158e-01	5.984560e-01		 0	 1	 TRUE	FALSE	124	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4767755	0.4769309	U	0.4686274	0.6162291
13773	129	184284	184285	1	 -19	Same	-	-	 0.000000	0	  0.000000	 -0.13353139	1.404632	2.995427	1.0251844	1247	Sortase and related acyltransferases	M	conserved hypothetical protein	1.417181	2.992076	1.0391802	656	Aldo/keto reductases, related to diketogulonate reductase	R	morphine 6-dehydrogenase, conjectural	 8.054069e-03	 1	1.574825e-04	 1.599795e-03	 3.686242e-02	 8.924797e-02	1.526732e-02		 1	41	 TRUE	FALSE	123	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.5809077	0.5177716	0.6402042	U	0.4686274	0.5517368
13773	129	184285	184286	1	  30	Same	-	-	 0.000000	0	  0.000000	 -0.18221272	1.417181	2.992076	1.0391802	656	Aldo/keto reductases, related to diketogulonate reductase	R	morphine 6-dehydrogenase, conjectural	1.448336	3.019726	1.0771493	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein	 4.170005e-03	 3	9.706262e-04	 1.045908e-04	 1.901193e-02	-1.624388e-02	9.613331e-02		41	 3	 TRUE	FALSE	122	 TRUE	0.4469764	0.2749489	0.5480306	0.4469764	0.7136133	0.5381027	0.5167496	0.6083676	U	0.4686274	0.5492585
13773	129	184286	184287	1	  -3	Same	-	-	 2.793208	0	  2.793208	  2.47183377	1.448336	3.019726	1.0771493	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein	1.462228	3.184359	1.1055444	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein	 1.241845e-01	 3	1.929909e-04	-3.312401e-05	 2.062479e-02	 1.347678e-02	1.824469e-02	C	 3	 5	 TRUE	FALSE	121	 TRUE	2.9180123	1.6867846	0.5480306	2.9337967	0.7136133	1.0563233	0.5183810	0.6385209	Y	1.4497162	0.8929041
13773	129	184287	184288	1	  79	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.462228	3.184359	1.1055444	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein	1.464953	3.252179	1.0944779	-	-	-	hypothetical protein	 0.000000e+00	 0	7.427215e-06	 1.469253e-04	 2.262442e-02	 4.430298e-02	3.115780e-04		 5	 0	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184846	0.6539188	U	0.4686274	0.6162291
13773	129	184288	184289	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.464953	3.252179	1.0944779	-	-	-	hypothetical protein	1.438843	3.205899	1.0909442	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein	 0.000000e+00	 0	6.817217e-04	-1.701750e-04	 1.868094e-02	-6.064286e-03	6.106930e-02		 0	 1	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195057	0.6200599	U	0.4686274	0.6162291
13773	129	184289	184290	1	 102	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.438843	3.205899	1.0909442	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein	1.459276	3.177424	1.0556032	370	Fe2+ transport system protein B	P	conserved within P. aerophilum	 0.000000e+00	 0	4.174814e-04	-9.892583e-05	 1.933888e-02	-4.770855e-03	4.012289e-02	0	 1	 0	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197094	0.6279101	N	0.5492530	0.6245624
13773	129	184290	184291	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.459276	3.177424	1.0556032	370	Fe2+ transport system protein B	P	conserved within P. aerophilum	1.513814	3.436301	1.1659767	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.974423e-03	 4.920551e-04	 3.622806e-02	 1.011156e-01	1.704809e-01		 0	 0	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5188834	0.5875676	U	0.4686274	0.6162291
13773	129	184291	184292	1	  48	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.513814	3.436301	1.1659767	-	-	-	conserved within P. aerophilum	1.611208	3.345415	1.0872249	1552	Ribosomal protein L40E	J	ribosomal protein L40	 0.000000e+00	 0	9.485584e-03	 9.975832e-03	 1.923442e-01	 5.190602e-01	9.050724e-02		 0	 3	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6840706	0.6107212	U	0.4686274	0.6162291
13773	129	184292	184293	1	 190	Convergent	+	-	 0.000000	0	  0.000000	 -0.26504093	1.611208	3.345415	1.0872249	1552	Ribosomal protein L40E	J	ribosomal protein L40	1.442284	3.036951	1.0498839	648	Endonuclease IV	L	DNA-(apurinic or apyrimidinic site) lyase (endonuclease IV)	 7.475750e-02	 3	2.853527e-02	-1.455720e-03	-6.093353e-02	 8.843751e-03	7.681453e-01	0	 3	13	FALSE	FALSE	121	FALSE	0.4469764	0.2605979	0.5480306	0.4469764	0.7136133	0.9356931	0.5189848	0.4580319	N	0.5492530	0.5534886
13773	129	184293	184294	1	 175	Divergent	-	+	 0.000000	0	  0.000000	 -0.62387718	1.442284	3.036951	1.0498839	648	Endonuclease IV	L	DNA-(apurinic or apyrimidinic site) lyase (endonuclease IV)	1.444164	3.136019	1.0952778	1293	Predicted RNA-binding protein homologous to eukaryotic snRNP	K	conserved hypothetical protein	 9.959272e-02	11	3.534738e-06	 6.584455e-05	 2.142956e-02	 2.756494e-04	3.115780e-04	0	13	11	 TRUE	FALSE	120	FALSE	0.4469764	0.2300613	0.5480306	0.4469764	0.7764261	1.0128743	0.5199424	0.6539188	N	0.5492530	0.5438543
13773	129	184294	184295	1	  57	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.444164	3.136019	1.0952778	1293	Predicted RNA-binding protein homologous to eukaryotic snRNP	K	conserved hypothetical protein	1.446520	3.874333	1.2732371	-	-	-	P. aerophilum family 550 protein	 0.000000e+00	 0	5.551354e-06	 3.522222e-05	 2.107711e-02	 1.314636e-03	3.981602e-04		11	 0	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198704	0.6536323	U	0.4686274	0.6162291
13773	129	184295	184296	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.446520	3.874333	1.2732371	-	-	-	P. aerophilum family 550 protein	1.532651	3.426925	1.1361260	-	-	-	P. aerophilum family 66 protein	 0.000000e+00	 0	7.418458e-03	-3.959340e-04	 3.281602e-02	 3.279285e-02	4.116458e-01		 0	 0	 TRUE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5174668	0.5103693	U	0.4686274	0.6162291
13773	129	184296	184297	1	  48	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.532651	3.426925	1.1361260	-	-	-	P. aerophilum family 66 protein	1.464706	3.160688	1.0265853	1656	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	4.616548e-03	 1.081765e-03	 1.706807e-02	 1.502124e-01	2.220485e-01		 0	 6	 TRUE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5304007	0.5735582	U	0.4686274	0.6162291
13773	129	184297	184298	1	 -28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.464706	3.160688	1.0265853	1656	Uncharacterized conserved protein	S	conserved hypothetical protein	1.567695	3.651362	1.1671435	167	Dihydroorotate dehydrogenase	F	dihydroorotate dehydrogenase (pyrD)	 8.421529e-03	 6	1.060685e-02	 1.548301e-03	 7.274076e-02	 1.739654e-01	3.366315e-01		 6	 7	FALSE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7537284	0.5835606	0.5396104	0.5289643	U	0.4686274	0.6162291
13773	129	184298	184299	1	 -12	Same	-	-	 0.000000	0	  0.000000	 -0.85121176	1.567695	3.651362	1.1671435	167	Dihydroorotate dehydrogenase	F	dihydroorotate dehydrogenase (pyrD)	1.431834	3.100394	1.0712098	461	Orotate phosphoribosyltransferase	F	orotate phosphoribosyltransferase (pyrE)	 4.766698e-03	 7	1.845828e-02	-2.274750e-03	-3.923780e-02	-7.411906e-02	7.939179e-01	F	 7	42	 TRUE	FALSE	119	 TRUE	0.4469764	0.2174351	0.5480306	0.4469764	0.7596462	0.5426548	0.5000893	0.4559908	Y	1.4497162	0.6352919
13773	129	184299	184300	1	  12	Same	-	-	 5.495528	0	  8.158115	  5.21908675	1.431834	3.100394	1.0712098	461	Orotate phosphoribosyltransferase	F	orotate phosphoribosyltransferase (pyrE)	1.454427	3.163052	1.0445590	1781	Aspartate carbamoyltransferase, regulatory subunit	F	aspartate carbamoyltransferase, regulatory subunit (pyrI)	 7.652572e-02	18	5.104353e-04	-5.933936e-05	 1.909576e-02	-1.168800e-02	4.784107e-02	F	42	18	 TRUE	FALSE	118	 TRUE	2.7996416	1.7715703	0.5480306	2.8030968	0.7781393	0.9399550	0.5180885	0.6247981	Y	1.4497162	0.9040847
13773	129	184300	184301	1	 499	Same	-	-	 0.000000	0	  0.000000	 -0.07410797	1.454427	3.163052	1.0445590	1781	Aspartate carbamoyltransferase, regulatory subunit	F	aspartate carbamoyltransferase, regulatory subunit (pyrI)	1.383407	3.053369	1.0615078	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein, putative	-9.899478e-03	 4	5.043777e-03	-2.062600e-04	 3.004041e-02	-7.022462e-02	4.675915e-01	0	18	 4	 TRUE	FALSE	117	 TRUE	0.4469764	0.2976889	0.5480306	0.4469764	0.7323301	0.5247453	0.5013484	0.4996268	N	0.5492530	0.5651364
13773	129	184301	184302	1	  70	Divergent	-	+	 1.992430	0	  1.992430	  1.99243016	1.383407	3.053369	1.0615078	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein, putative	1.408581	3.166510	1.0918918	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid ABC transporter, ATP-binding protein, putative	 9.711641e-03	 4	6.337298e-04	 2.910581e-03	 4.768580e-02	 1.824127e-01	5.336348e-02	E	 4	 5	 TRUE	FALSE	116	FALSE	2.9329858	1.6530229	0.5480306	2.9471180	0.7323301	0.5948613	0.5429729	0.6227021	Y	1.4497162	0.8885368
13773	129	184302	184303	1	 162	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.408581	3.166510	1.0918918	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid ABC transporter, ATP-binding protein, putative	1.383895	3.106586	1.0375652	1758	DNA-directed RNA polymerase, subunit K/omega	K	DNA-directed RNA polymerase subunit	 0.000000e+00	 0	6.093828e-04	 2.889676e-03	 6.143981e-02	 1.821618e-01	5.300950e-02	0	 5	 0	FALSE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5426754	0.6228520	N	0.5492530	0.6245624
13773	129	184303	184304	1	  78	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.383895	3.106586	1.0375652	1758	DNA-directed RNA polymerase, subunit K/omega	K	DNA-directed RNA polymerase subunit	1.399065	3.017083	1.0554111	459	Chaperonin GroEL (HSP60 family)	O	thermosome (chaperonin) beta subunit	 0.000000e+00	 0	2.301197e-04	 3.531980e-03	 5.741850e-02	 2.398892e-01	1.603537e-02	0	 0	 7	 TRUE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5646332	0.6397376	N	0.5492530	0.6245624
13773	129	184304	184305	1	  46	Same	-	-	 0.000000	0	  0.000000	 -0.13150953	1.399065	3.017083	1.0554111	459	Chaperonin GroEL (HSP60 family)	O	thermosome (chaperonin) beta subunit	1.478679	3.290592	1.0722279	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-ketoacid ferredoxin oxidoreductase beta subunit	 3.216415e-02	 4	6.338416e-03	-1.427839e-03	-1.019851e-03	-1.529872e-01	6.176054e-01	0	 7	 4	 TRUE	FALSE	115	 TRUE	0.4469764	0.2892175	0.5480306	0.4469764	0.7323301	0.7489643	0.4760116	0.4750470	N	0.5492530	0.5624819
13773	129	184305	184306	1	  -3	Same	-	-	 4.859812	0	  4.859812	  4.80062353	1.478679	3.290592	1.0722279	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-ketoacid ferredoxin oxidoreductase beta subunit	1.475306	3.177926	1.0943908	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-ketoacid ferredoxin oxidoreductase alpha subunit	 1.090583e-01	 4	1.138178e-05	 6.524970e-04	 2.792822e-02	 1.142631e-01	1.140293e-03	C	 4	 4	 TRUE	FALSE	114	 TRUE	2.8416702	1.7598186	0.5480306	2.8954298	0.7323301	1.0429031	0.5208098	0.6516922	Y	1.4497162	0.9023201
13773	129	184306	184307	1	  -3	Same	-	-	 2.197225	0	  2.197225	  2.13803571	1.475306	3.177926	1.0943908	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-ketoacid ferredoxin oxidoreductase alpha subunit	1.371909	2.954969	1.0472439	1144	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit	C	2-ketoacid ferredoxin oxidoreductase delta subunit	 8.678342e-02	 2	1.069088e-02	-1.900684e-03	 1.310605e-02	-2.073025e-01	9.336038e-01	C	 4	 2	 TRUE	FALSE	113	 TRUE	2.9321590	1.6679624	0.5480306	2.9469979	0.6838149	0.9642105	0.4623560	0.4442659	Y	1.4497162	0.8904181
13773	129	184307	184308	1	 147	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.371909	2.954969	1.0472439	1144	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit	C	2-ketoacid ferredoxin oxidoreductase delta subunit	1.507357	3.312188	1.1221701	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	2-ketoacid ferredoxin oxidoreductase gamma subunit	 3.728161e-04	 1	1.834622e-02	-4.448262e-03	-3.936271e-02	-3.557291e-01	1.431540e+00	C	 2	 1	 TRUE	FALSE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.4270132	0.4189018	Y	1.4497162	0.7118045
13773	129	184308	184309	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.12516314	1.507357	3.312188	1.1221701	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	2-ketoacid ferredoxin oxidoreductase gamma subunit	1.436544	3.184358	1.0850191	677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	M	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase, conjectural	 5.899547e-03	 1	5.014515e-03	-8.310104e-04	 3.627470e-03	-2.625619e-02	3.592636e-01	0	 1	48	FALSE	FALSE	113	FALSE	0.4469764	0.2919799	0.5480306	0.4469764	0.6329203	0.5540132	0.5133304	0.5214465	N	0.5492530	0.5633479
13773	129	184309	184310	1	  46	Divergent	-	+	 0.000000	0	  0.000000	 -2.60827448	1.436544	3.184358	1.0850191	677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	M	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase, conjectural	1.549488	3.372190	1.1218462	1234	Metal-dependent hydrolases of the beta-lactamase superfamily III	R	conserved hypothetical protein	 6.409358e-02	10	1.275635e-02	-1.456607e-03	 2.758347e-02	-3.520302e-02	6.200203e-01		48	10	 TRUE	FALSE	112	FALSE	0.4469764	0.1936804	0.5480306	0.4469764	0.7739415	0.9048018	0.5106205	0.4746158	U	0.4686274	0.5235150
13773	129	184310	184311	1	  81	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.549488	3.372190	1.1218462	1234	Metal-dependent hydrolases of the beta-lactamase superfamily III	R	conserved hypothetical protein	1.480889	3.112515	1.0495184	1909	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 1.976326e-03	 1	4.705778e-03	 2.893450e-03	 3.234140e-02	 2.753784e-01	1.351395e-01		10	 1	FALSE	FALSE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4947521	0.5828152	0.5970160	U	0.4686274	0.6162291
13773	129	184311	184312	1	  24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.480889	3.112515	1.0495184	1909	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.450067	3.330376	1.0663381	1651	Protein-disulfide isomerase	O	hypothetical protein	 0.000000e+00	 0	9.499847e-04	-3.909548e-05	 1.807557e-02	 3.113719e-02	8.326967e-02		 1	 0	FALSE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173982	0.6130924	U	0.4686274	0.6162291
13773	129	184312	184313	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.450067	3.330376	1.0663381	1651	Protein-disulfide isomerase	O	hypothetical protein	1.436011	3.183956	1.0739055	-	-	-	hypothetical protein	 0.000000e+00	 0	1.975956e-04	 2.038821e-05	 2.157250e-02	-4.301426e-03	1.824469e-02		 0	 0	FALSE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197773	0.6385209	U	0.4686274	0.6162291
13773	129	184313	184314	1	 148	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.436011	3.183956	1.0739055	-	-	-	hypothetical protein	1.630002	3.400240	1.0884542	1537	Predicted RNA-binding proteins	R	cell division protein pelota (pelA), conjectural	 0.000000e+00	 0	3.763265e-02	-2.747419e-03	 6.902659e-02	-4.688160e-02	9.276809e-01		 0	12	 TRUE	FALSE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5073268	0.4451969	U	0.4686274	0.6162291
13773	129	184314	184315	1	  35	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.630002	3.400240	1.0884542	1537	Predicted RNA-binding proteins	R	cell division protein pelota (pelA), conjectural	1.236591	2.598014	0.9637321	-	-	-	paREP4	 0.000000e+00	 0	1.547718e-01	-3.836548e-02	-3.916836e-01	-9.054446e-01	3.628396e+00		12	 0	FALSE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3786551	0.3992015	U	0.4686274	0.6162291
13773	129	184315	184316	1	 246	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.236591	2.598014	0.9637321	-	-	-	paREP4	1.602759	3.491458	1.1034950	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.340787e-01	-3.251367e-02	-4.184088e-01	-8.642880e-01	3.472230e+00		 0	 0	 TRUE	FALSE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3800942	0.3996124	U	0.4686274	0.6162291
13773	129	184316	184317	1	 -17	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.602759	3.491458	1.1034950	-	-	-	conserved within P. aerophilum	1.610737	3.537039	1.1267562	1618	Predicted nucleotide kinase	F	conserved hypothetical protein	 0.000000e+00	 0	6.364334e-05	 2.411926e-02	 3.090417e-01	 7.694434e-01	1.908342e-04		 0	 8	FALSE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7731048	0.6545960	U	0.4686274	0.6162291
13773	129	184317	184318	1	  43	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.610737	3.537039	1.1267562	1618	Predicted nucleotide kinase	F	conserved hypothetical protein	1.715584	4.029313	1.1872641	142	Geranylgeranyl pyrophosphate synthase	H	polyprenyl synthetase	 1.557260e-03	 1	1.099290e-02	 4.209718e-02	 6.257200e-01	 8.617224e-01	8.201158e-03	0	 8	 1	 TRUE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4867810	0.7965262	0.6439704	N	0.5492530	0.6245624
13773	129	184318	184319	1	  42	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.715584	4.029313	1.1872641	142	Geranylgeranyl pyrophosphate synthase	H	polyprenyl synthetase	1.680722	3.498307	1.0576154	-	-	-	hypothetical protein	 0.000000e+00	 0	1.215348e-03	 6.058662e-02	 6.854412e-01	 9.335326e-01	2.850733e-04		 1	 0	 TRUE	FALSE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8085259	0.6540676	U	0.4686274	0.6162291
13773	129	184319	184320	1	  84	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.680722	3.498307	1.0576154	-	-	-	hypothetical protein	1.477025	3.121444	1.0592141	54	Riboflavin synthase beta-chain	H	riboflavin synthase	 0.000000e+00	 0	4.149259e-02	 5.878093e-03	-4.242291e-02	 3.219585e-01	3.864392e-01		 0	 5	 TRUE	FALSE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6007917	0.5147662	U	0.4686274	0.6162291
13773	129	184320	184321	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.07864313	1.477025	3.121444	1.0592141	54	Riboflavin synthase beta-chain	H	riboflavin synthase	1.559680	3.345168	1.0986284	115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	EH	branched-chain amino acid aminotransferase (ilvE)	 1.921128e-02	 5	6.831988e-03	 2.775594e-03	 8.130107e-02	 2.608173e-01	1.933839e-01		 5	55	FALSE	FALSE	113	FALSE	0.4469764	0.2970905	0.5480306	0.4469764	0.7448207	0.6724471	0.5742403	0.5820196	U	0.4686274	0.5562327
13773	129	184321	184322	1	  -3	Same	-	-	 3.688879	0	  7.067604	 -1.26049231	1.559680	3.345168	1.0986284	115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	EH	branched-chain amino acid aminotransferase (ilvE)	1.511154	3.205552	1.0917714	59	Ketol-acid reductoisomerase	EH	acetohydroxy acid isomeroreductase (ilvC)	 1.062985e-01	54	2.354845e-03	 6.471350e-03	 7.569324e-02	 4.412457e-01	4.293769e-02		55	54	 TRUE	FALSE	112	 TRUE	2.8658703	0.2048851	0.5480306	2.8223619	0.7712119	1.0277769	0.6524431	0.6268270	U	0.4686274	0.4522736
13773	129	184322	184323	1	  13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.511154	3.205552	1.0917714	59	Ketol-acid reductoisomerase	EH	acetohydroxy acid isomeroreductase (ilvC)	1.422973	3.117414	1.0815175	-	-	-	acetolactate synthase small subunit	 0.000000e+00	 0	7.775830e-03	-1.698394e-03	-6.138758e-03	-1.104205e-01	5.819477e-01		54	 0	 TRUE	FALSE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4880350	0.4794292	U	0.4686274	0.6162291
13773	129	184323	184324	1	 -10	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.422973	3.117414	1.0815175	-	-	-	acetolactate synthase small subunit	1.546168	3.387238	1.1296398	28	Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome)	EH	acetolactate synthase large subunit (ilvB)	 0.000000e+00	 0	1.517691e-02	-2.693486e-03	 1.000408e-02	-1.423099e-01	8.594983e-01		 0	61	 TRUE	FALSE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4790360	0.4492667	U	0.4686274	0.6162291
13773	129	184324	184325	1	 117	Same	-	-	 0.000000	0	  0.000000	 -0.25131443	1.546168	3.387238	1.1296398	28	Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome)	EH	acetolactate synthase large subunit (ilvB)	1.564100	3.219845	1.0069466	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	mutT/nudix family protein	 2.630347e-03	 1	3.215629e-04	 1.068177e-02	 1.550804e-01	 5.782394e-01	3.138751e-03		61	 1	 TRUE	FALSE	109	 TRUE	0.4469764	0.2639739	0.5480306	0.4469764	0.6329203	0.5063263	0.7115627	0.6484515	U	0.4686274	0.5457943
13773	129	184325	184326	1	  50	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.564100	3.219845	1.0069466	494	NTP pyrophosphohydrolases including oxidative damage repair enzymes	LR	mutT/nudix family protein	1.576443	3.218609	0.9602702	-	-	-	hypothetical protein	 0.000000e+00	 0	1.523561e-04	 1.409402e-02	 1.929816e-01	 6.454483e-01	8.505079e-04		 1	 0	 TRUE	FALSE	108	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7352967	0.6520519	U	0.4686274	0.6162291
13773	129	184326	184327	1	 -25	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.576443	3.218609	0.9602702	-	-	-	hypothetical protein	1.539256	3.294897	1.0288293	-	-	-	hypothetical protein	 0.000000e+00	 0	1.382872e-03	 1.098731e-02	 1.290975e-01	 5.807779e-01	1.170980e-02		 0	 0	FALSE	FALSE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7131820	0.6420996	U	0.4686274	0.6162291
13773	129	184327	184328	1	 553	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.539256	3.294897	1.0288293	-	-	-	hypothetical protein	1.489283	3.311689	1.1134404	1236	Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	mRNA 3'-end processing factor, conjectural	 0.000000e+00	 0	2.497330e-03	 3.329127e-03	 4.370375e-02	 3.110921e-01	7.381042e-02		 0	 9	 TRUE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5966647	0.6167268	U	0.4686274	0.6162291
13773	129	184328	184329	1	 210	Divergent	-	+	 0.000000	0	  0.000000	 -0.61090494	1.489283	3.311689	1.1134404	1236	Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	mRNA 3'-end processing factor, conjectural	1.582946	3.580740	1.1155095	198	Ribosomal protein L24	J	ribosomal protein L24	 1.528708e-01	 9	8.772827e-03	 4.984540e-03	 1.193219e-01	 3.655753e-01	1.568233e-01	J	 9	11	 TRUE	FALSE	107	FALSE	0.4469764	0.2309594	0.5480306	0.4469764	0.7702221	1.0876510	0.6178516	0.5907175	Y	1.4497162	0.6392750
13773	129	184329	184330	1	   5	Same	+	+	25.178204	0	 32.982047	 32.98204723	1.582946	3.580740	1.1155095	198	Ribosomal protein L24	J	ribosomal protein L24	1.594934	3.536136	1.1169319	1471	Ribosomal protein S4E	J	ribosomal protein S4	 3.056801e-01	11	1.437018e-04	 1.888327e-02	 2.499007e-01	 7.170653e-01	6.414149e-04	J	11	11	FALSE	FALSE	108	 TRUE	2.2337636	1.9903398	0.5480306	2.3762174	0.7764261	1.2244861	0.7599046	0.6527891	Y	1.4497162	0.9303678
13773	129	184330	184331	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.594934	3.536136	1.1169319	1471	Ribosomal protein S4E	J	ribosomal protein S4	1.438135	3.049917	1.0235899	-	-	-	hypothetical protein	 0.000000e+00	 0	2.458577e-02	-1.903016e-03	-5.339052e-02	-3.166434e-02	8.035203e-01		11	 0	FALSE	FALSE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5117420	0.4550988	U	0.4686274	0.6162291
13773	129	184331	184332	1	  32	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.438135	3.049917	1.0235899	-	-	-	hypothetical protein	1.538263	3.389082	1.0953439	4608	ABC-type oligopeptide transport system, ATPase component	E	oligopeptide transport ATP-binding protein, putative	 0.000000e+00	 0	1.002558e-02	-1.151695e-03	 2.598960e-02	-2.603826e-02	5.530428e-01		 0	 5	 TRUE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5135303	0.4833863	U	0.4686274	0.6162291
13773	129	184332	184333	1	   3	Same	-	-	 6.962243	0	 12.568862	 12.56886219	1.538263	3.389082	1.0953439	4608	ABC-type oligopeptide transport system, ATPase component	E	oligopeptide transport ATP-binding protein, putative	1.469132	3.311856	1.1051835	444	ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component	EP	oligopeptide transport ATP-binding protein, putative	 9.486128e-02	 5	4.779084e-03	 1.541010e-03	 2.039054e-02	 1.855226e-01	1.974551e-01		 5	 6	 TRUE	FALSE	107	 TRUE	2.7529488	1.8718624	0.5480306	2.6981093	0.7448207	0.9927460	0.5441739	0.5805111	U	0.4686274	0.8750578
13773	129	184333	184334	1	  47	Divergent	-	+	 0.000000	0	  0.000000	 -0.18221272	1.469132	3.311856	1.1051835	444	ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component	EP	oligopeptide transport ATP-binding protein, putative	1.586615	3.474283	1.1151371	524	Sugar kinases, ribokinase family	G	kinase, conjectural	 3.505284e-02	 1	1.380220e-02	 2.398735e-03	 9.442014e-02	 2.207740e-01	3.348527e-01		 6	 1	 TRUE	FALSE	106	FALSE	0.4469764	0.2749489	0.5480306	0.4469764	0.6329203	0.7716100	0.5573097	0.5297247	U	0.4686274	0.5492585
13773	129	184334	184335	1	 -34	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.586615	3.474283	1.1151371	524	Sugar kinases, ribokinase family	G	kinase, conjectural	1.622632	3.702503	1.1929767	2524	Predicted transcriptional regulator, contains C-terminal CBS domains	K	conserved protein with 2 CBS domains	 1.557260e-03	 1	1.297232e-03	 2.315530e-02	 3.195066e-01	 7.572159e-01	3.492148e-03	0	 1	 8	FALSE	FALSE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4867810	0.7689766	0.6477695	N	0.5492530	0.6245624
13773	129	184335	184336	1	 150	Divergent	-	+	 0.000000	0	  0.000000	 -0.13150953	1.622632	3.702503	1.1929767	2524	Predicted transcriptional regulator, contains C-terminal CBS domains	K	conserved protein with 2 CBS domains	1.504294	3.315029	1.0861687	111	Phosphoglycerate dehydrogenase and related dehydrogenases	HE	D-3-phosphoglycerate dehydrogenase (serA)	 1.371145e-03	 8	1.400397e-02	 9.058672e-03	 5.929540e-02	 4.808597e-01	1.340133e-01		 8	14	 TRUE	FALSE	106	FALSE	0.4469764	0.2892175	0.5480306	0.4469764	0.7652913	0.4797505	0.6669027	0.5973082	U	0.4686274	0.5537552
13773	129	184336	184337	1	  -3	Same	+	+	 5.159055	0	  9.207937	  9.02572477	1.504294	3.315029	1.0861687	111	Phosphoglycerate dehydrogenase and related dehydrogenases	HE	D-3-phosphoglycerate dehydrogenase (serA)	1.473669	3.304280	1.0988503	75	Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	E	aminotransferase (class 5)	 8.936729e-02	 6	9.378824e-04	 1.178409e-03	 2.866933e-02	 1.623363e-01	5.300950e-02		14	 6	FALSE	FALSE	107	 TRUE	2.8135752	1.8292238	0.5480306	2.7787754	0.7537284	0.9783689	0.5351216	0.6228520	U	0.4686274	0.8681381
13773	129	184337	184338	1	 -19	Same	+	+	 0.000000	0	  0.000000	 -0.18221272	1.473669	3.304280	1.0988503	75	Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	E	aminotransferase (class 5)	1.516912	3.435952	1.1088199	1578	Uncharacterized conserved protein	S	conserved hypothetical protein	 5.190299e-03	 5	1.869980e-03	 1.459494e-03	 4.744386e-02	 1.833280e-01	8.958605e-02		 6	 5	FALSE	FALSE	108	 TRUE	0.4469764	0.2749489	0.5480306	0.4469764	0.7448207	0.5453500	0.5432716	0.6110830	U	0.4686274	0.5492585
13773	129	184338	184339	1	 -19	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.516912	3.435952	1.1088199	1578	Uncharacterized conserved protein	S	conserved hypothetical protein	1.451333	3.242708	1.0403730	-	-	-	conserved hypothetical protein	 9.520652e-04	 1	4.300552e-03	-3.896531e-06	 9.790648e-03	 5.647985e-02	2.596853e-01		 5	 1	FALSE	FALSE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4684288	0.5186920	0.5580942	U	0.4686274	0.6162291
13773	129	184339	184340	1	  63	Same	-	-	 0.000000	0	  0.000000	 -0.13353139	1.451333	3.242708	1.0403730	-	-	-	conserved hypothetical protein	1.553839	3.392256	1.1277923	1746	tRNA nucleotidyltransferase (CCA-adding enzyme)	J	tRNA nucleotidyltransferase	 2.507089e-02	 1	1.050734e-02	-6.092625e-06	 4.731898e-02	 7.085131e-02	4.396820e-01		 1	12	 TRUE	FALSE	108	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.7074534	0.5180748	0.5054889	U	0.4686274	0.5517368
13773	129	184340	184341	1	  -3	Same	-	-	16.075597	0	 21.531393	 21.15896465	1.553839	3.392256	1.1277923	1746	tRNA nucleotidyltransferase (CCA-adding enzyme)	J	tRNA nucleotidyltransferase	1.568878	3.483722	1.0639774	1514	2'-5' RNA ligase	J	conserved hypothetical protein	 1.615812e-01	12	2.261660e-04	 1.203582e-02	 1.698633e-01	 6.063014e-01	1.981377e-03	J	12	23	 TRUE	FALSE	107	 TRUE	2.5192435	1.9277920	0.5480306	2.5620814	0.7776747	1.1016449	0.7222153	0.6503033	Y	1.4497162	0.9225326
13773	129	184341	184342	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.13353139	1.568878	3.483722	1.0639774	1514	2'-5' RNA ligase	J	conserved hypothetical protein	1.528385	3.353882	1.0784475	1522	Transcriptional regulators	K	DNA binding transcriptional repressor, conjectural	 1.599790e-02	 1	1.639671e-03	 9.045360e-03	 1.065002e-01	 5.362017e-01	1.742481e-02	0	23	 1	 TRUE	FALSE	106	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.6457313	0.6896749	0.6390912	N	0.5492530	0.5604716
13773	129	184342	184343	1	  33	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.528385	3.353882	1.0784475	1522	Transcriptional regulators	K	DNA binding transcriptional repressor, conjectural	1.588990	3.455744	1.1215137	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB (TFIIB)	 0.000000e+00	 0	3.672947e-03	 1.059382e-02	 1.776302e-01	 5.675314e-01	3.197592e-02	K	 1	 0	 TRUE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7063502	0.6315628	Y	1.4497162	0.7118045
13773	129	184343	184344	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.588990	3.455744	1.1215137	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB (TFIIB)	1.457763	3.107900	1.0606085	3277	RNA-binding protein involved in rRNA processing	J	hypothetical protein	 0.000000e+00	 0	1.722031e-02	 8.765601e-04	-1.699039e-02	 1.295169e-01	4.834678e-01	0	 0	 0	 TRUE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5239600	0.4957719	N	0.5492530	0.6245624
13773	129	184344	184345	1	 158	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.457763	3.107900	1.0606085	3277	RNA-binding protein involved in rRNA processing	J	hypothetical protein	1.466433	3.149277	1.0587275	2007	Ribosomal protein S8E	J	ribosomal protein S8	 0.000000e+00	 0	7.516879e-05	 9.581555e-05	 2.232941e-02	 3.563181e-02	6.493663e-03	J	 0	10	 TRUE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176617	0.6450314	Y	1.4497162	0.7118045
13773	129	184345	184346	1	  -3	Same	+	+	 2.833213	0	  2.833213	  2.39433438	1.466433	3.149277	1.0587275	2007	Ribosomal protein S8E	J	ribosomal protein S8	1.639334	3.517301	1.0630786	1400	Signal recognition particle 19 kDa protein	U	signal recognition particle	 1.313252e-01	 8	2.989478e-02	 2.826735e-03	 1.429148e-01	 2.146861e-01	4.717992e-01	0	10	 8	FALSE	FALSE	104	 TRUE	2.9141387	1.6830070	0.5480306	2.9300754	0.7652913	1.0689402	0.5551901	0.4985726	N	0.5492530	0.8482854
13773	129	184346	184347	1	   0	Same	+	+	 0.000000	0	  0.000000	 -0.29999575	1.639334	3.517301	1.0630786	1400	Signal recognition particle 19 kDa protein	U	signal recognition particle	1.461329	3.234707	1.0514674	1100	GTPase SAR1 and related small G proteins	R	conserved hypothetical protein	 2.159066e-02	 5	3.168600e-02	 1.867380e-03	-4.687829e-02	 1.744325e-01	5.338080e-01		 8	 5	FALSE	FALSE	105	 TRUE	0.4469764	0.2548739	0.5480306	0.4469764	0.7448207	0.6890474	0.5401862	0.4864093	U	0.4686274	0.5429185
13773	129	184347	184348	1	 -15	Convergent	+	-	 0.000000	0	  0.000000	 -0.39347110	1.461329	3.234707	1.0514674	1100	GTPase SAR1 and related small G proteins	R	conserved hypothetical protein	1.524551	3.315540	1.0594453	2139	Ribosomal protein L21E	J	ribosomal protein L21	 7.949421e-02	 5	3.997084e-03	 7.268996e-04	 4.257795e-02	 1.223500e-01	2.078184e-01		 5	 5	FALSE	FALSE	106	FALSE	0.4469764	0.2430094	0.5480306	0.4469764	0.7448207	0.9537343	0.5225948	0.5771537	U	0.4686274	0.5391647
13773	129	184348	184349	1	  88	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.524551	3.315540	1.0594453	2139	Ribosomal protein L21E	J	ribosomal protein L21	1.442070	3.307552	1.1072131	1460	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 9.520652e-04	 1	6.803143e-03	-6.820354e-04	-6.080003e-04	 5.448787e-03	4.057582e-01		 5	 1	 TRUE	FALSE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4684288	0.5194420	0.5114888	U	0.4686274	0.6162291
13773	129	184349	184350	1	  -3	Same	+	+	 4.025352	0	  4.025352	  4.02535169	1.442070	3.307552	1.1072131	1460	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.517416	3.158394	0.9969108	1491	Predicted RNA-binding protein	J	conserved hypothetical protein	 2.630109e-02	 1	5.676949e-03	-6.155119e-04	 2.438999e-02	 5.111882e-03	3.565089e-01		 1	11	FALSE	FALSE	106	 TRUE	2.8601813	1.7461844	0.5480306	2.9073706	0.6329203	0.7172240	0.5194777	0.5232211	U	0.4686274	0.8548323
13773	129	184350	184351	1	   2	Convergent	+	-	 0.000000	0	  0.000000	 -0.90538035	1.517416	3.158394	0.9969108	1491	Predicted RNA-binding protein	J	conserved hypothetical protein	1.619530	3.394650	1.0504393	231	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	J	translation initiation factor aIF-5A	 3.056801e-01	11	1.042733e-02	 1.110089e-02	 2.112548e-01	 5.413948e-01	8.326967e-02	J	11	11	FALSE	FALSE	107	FALSE	0.4469764	0.2144997	0.5480306	0.4469764	0.7764261	1.2244861	0.6934733	0.6130924	Y	1.4497162	0.6344249
13773	129	184351	184352	1	  31	Same	-	-	 0.000000	0	  0.000000	 -1.03891174	1.619530	3.394650	1.0504393	231	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	J	translation initiation factor aIF-5A	1.448335	3.065560	1.0671564	5	Purine nucleoside phosphorylase	F	purine nucleoside phosphorylase	 1.068399e-01	11	2.930775e-02	-5.141506e-04	-5.704233e-02	 5.901135e-02	6.857314e-01	0	11	39	 TRUE	FALSE	106	 TRUE	0.4469764	0.2100064	0.5480306	0.4469764	0.7764261	1.0315374	0.5186128	0.4659563	N	0.5492530	0.5375086
13773	129	184352	184353	1	  32	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.448335	3.065560	1.0671564	5	Purine nucleoside phosphorylase	F	purine nucleoside phosphorylase	1.462763	3.062716	1.0402784	-	-	-	hypothetical protein	 0.000000e+00	 0	2.081753e-04	-3.476969e-05	 2.063573e-02	 1.362580e-02	1.972483e-02		39	 0	 TRUE	FALSE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183388	0.6377141	U	0.4686274	0.6162291
13773	129	184353	184354	1	  26	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.462763	3.062716	1.0402784	-	-	-	hypothetical protein	1.391250	2.887626	1.0228993	23	Translation initiation factor 1 (eIF-1/SUI1) and related proteins	J	translation initiation factor SUI1 homolog	 0.000000e+00	 0	5.114072e-03	-6.838404e-04	 2.159939e-02	-1.017182e-01	4.888188e-01		 0	 9	FALSE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4904610	0.4944036	U	0.4686274	0.6162291
13773	129	184354	184355	1	 258	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.391250	2.887626	1.0228993	23	Translation initiation factor 1 (eIF-1/SUI1) and related proteins	J	translation initiation factor SUI1 homolog	1.462619	3.280351	1.0717500	-	-	-	hypothetical protein	 0.000000e+00	 0	5.093502e-03	-6.751817e-04	 3.977661e-03	-1.009619e-01	4.866749e-01		 9	 0	FALSE	FALSE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4908051	0.4946318	U	0.4686274	0.6162291
13773	129	184355	184356	1	  54	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.462619	3.280351	1.0717500	-	-	-	hypothetical protein	1.488151	3.195195	1.0998384	18	Arginyl-tRNA synthetase	J	arginyl-tRNA synthetase	 0.000000e+00	 0	6.518603e-04	 4.126589e-04	 2.867380e-02	 8.822370e-02	5.091032e-02		 0	59	 TRUE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177310	0.6235705	U	0.4686274	0.6162291
13773	129	184356	184357	1	  67	Divergent	-	+	 0.000000	0	  0.000000	 -0.29619069	1.488151	3.195195	1.0998384	18	Arginyl-tRNA synthetase	J	arginyl-tRNA synthetase	1.643818	3.516953	1.1364555	2053	Ribosomal protein S28E/S33	J	ribosomal protein S28	 9.399069e-03	 3	2.423242e-02	 7.073170e-03	 1.940399e-01	 3.988240e-01	2.457968e-01	J	59	 3	 TRUE	FALSE	105	FALSE	0.4469764	0.2560029	0.5480306	0.4469764	0.7136133	0.5898397	0.6342015	0.5639198	Y	1.4497162	0.6466000
13773	129	184357	184358	1	  -3	Same	+	+	 5.030438	0	  5.030438	  5.03043792	1.643818	3.516953	1.1364555	2053	Ribosomal protein S28E/S33	J	ribosomal protein S28	1.241528	2.637329	1.0132138	2075	Ribosomal protein L24E	J	ribosomal protein L24	 3.242777e-02	 3	1.618375e-01	-4.038333e-02	-4.336195e-01	-9.185038e-01	3.678271e+00	J	 3	10	FALSE	FALSE	106	 TRUE	2.8195094	1.7656869	0.5480306	2.8851565	0.7136133	0.7515835	0.3784150	0.3991330	Y	1.4497162	0.9032175
13773	129	184358	184359	1	   1	Convergent	+	-	 7.992945	0	 15.796788	 15.47112230	1.241528	2.637329	1.0132138	2075	Ribosomal protein L24E	J	ribosomal protein L24	1.551842	3.327242	1.0724503	1358	Ribosomal protein HS6-type (S12/L30/L7a)	J	ribosomal protein L7	 2.329131e-01	 9	9.629481e-02	-2.108078e-02	-3.119689e-01	-7.411953e-01	3.024343e+00	J	10	 9	FALSE	FALSE	107	FALSE	2.7093791	1.8841831	0.5480306	2.6611079	0.7702221	1.1625725	0.3851048	0.4009795	Y	1.4497162	0.9166846
13773	129	184359	184360	1	  32	Same	-	-	 0.000000	0	  0.000000	 -0.15154990	1.551842	3.327242	1.0724503	1358	Ribosomal protein HS6-type (S12/L30/L7a)	J	ribosomal protein L7	1.544364	3.619103	1.1930055	4177	ABC-type branched-chain amino acid transport system, permease component	E	branched-chain amino acid transport permease protein	 3.541483e-02	 3	5.591739e-05	 9.338943e-03	 1.262582e-01	 5.438492e-01	3.981602e-04	0	 9	 3	 TRUE	FALSE	106	 TRUE	0.4469764	0.2768227	0.5480306	0.4469764	0.7136133	0.7756969	0.6946224	0.6536323	N	0.5492530	0.5585917
13773	129	184360	184361	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.544364	3.619103	1.1930055	4177	ABC-type branched-chain amino acid transport system, permease component	E	branched-chain amino acid transport permease protein	1.526301	3.685455	1.1828287	559	Branched-chain amino acid ABC-type transport system, permease components	E	branched-chain amino acid transport permease protein	 5.631536e-04	 1	3.262819e-04	 6.964349e-03	 9.446585e-02	 4.768452e-01	5.204355e-03	E	 3	 1	 TRUE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4562299	0.6655223	0.6462385	Y	1.4497162	0.7118045
13773	129	184361	184362	1	 111	Divergent	-	+	 0.000000	0	  0.000000	 -0.05715841	1.526301	3.685455	1.1828287	559	Branched-chain amino acid ABC-type transport system, permease components	E	branched-chain amino acid transport permease protein	1.494560	3.278284	1.0999772	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein	 1.725611e-02	 1	1.007519e-03	 3.233561e-03	 4.902762e-02	 3.078367e-01	3.449387e-02	E	 1	21	 TRUE	FALSE	104	FALSE	0.4469764	0.3074832	0.5480306	0.4469764	0.6329203	0.6548124	0.5948838	0.6302077	Y	1.4497162	0.6614403
13773	129	184362	184363	1	  33	Same	+	+	 4.025352	0	  4.025352	  3.47724351	1.494560	3.278284	1.0999772	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	branched-chain amino acid binding protein	1.498062	3.172201	1.0414169	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	 5.768028e-02	 8	1.226756e-05	 2.014574e-03	 4.509171e-02	 2.335810e-01	7.633367e-04	E	21	 8	FALSE	FALSE	105	 TRUE	2.8601813	1.7423040	0.5480306	2.9073706	0.7652913	0.8758269	0.5626884	0.6522016	Y	1.4497162	0.9001294
13773	129	184363	184364	1	 403	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.498062	3.172201	1.0414169	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	branched-chain amino acid transport ATP-binding protein	1.525150	3.554011	1.1851881	1361	S-layer domain	M	conserved hypothetical protein	 1.557260e-03	 1	7.337422e-04	 3.442199e-03	 6.926892e-02	 3.225098e-01	2.285828e-02	0	 8	 1	FALSE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4867810	0.6010523	0.6363673	N	0.5492530	0.6245624
13773	129	184364	184365	1	  -7	Same	+	+	 0.000000	0	  0.000000	 -0.07232066	1.525150	3.554011	1.1851881	1361	S-layer domain	M	conserved hypothetical protein	1.454220	3.447871	1.1976571	477	Permeases of the major facilitator superfamily	GEPR	antibiotic resistance (efflux) protein, conjectural	 1.188643e-02	 1	5.031126e-03	 2.084858e-04	 9.380453e-03	 7.963204e-02	2.763709e-01		 1	31	FALSE	FALSE	107	 TRUE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.6108778	0.5177707	0.5518172	U	0.4686274	0.5573725
13773	129	184365	184366	1	  10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.454220	3.447871	1.1976571	477	Permeases of the major facilitator superfamily	GEPR	antibiotic resistance (efflux) protein, conjectural	1.405457	3.418685	1.1833821	477	Permeases of the major facilitator superfamily	GEPR	conserved hypothetical protein	 1.494197e-02	 2	2.377789e-03	-1.298450e-04	 2.455786e-02	-4.400966e-02	2.315508e-01		31	 2	FALSE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.6389201	0.5078076	0.5704308	U	0.4686274	0.6162291
13773	129	184366	184367	1	 -18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405457	3.418685	1.1833821	477	Permeases of the major facilitator superfamily	GEPR	conserved hypothetical protein	1.606888	3.415759	1.0124716	500	SAM-dependent methyltransferases	QR	hypothetical protein	 0.000000e+00	 0	4.057462e-02	-7.142830e-03	-6.734499e-03	-3.143940e-01	1.526732e+00		 2	 0	FALSE	FALSE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4364695	0.4163522	U	0.4686274	0.6162291
13773	129	184367	184368	1	  75	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.606888	3.415759	1.0124716	500	SAM-dependent methyltransferases	QR	hypothetical protein	1.371638	2.923444	1.0054182	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	 0.000000e+00	 0	5.534270e-02	-1.240151e-02	-1.695133e-01	-5.695446e-01	2.330133e+00		 0	 0	FALSE	FALSE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3968347	0.4049063	U	0.4686274	0.6162291
13773	129	184368	184369	1	  31	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.371638	2.923444	1.0054182	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein	1.456060	3.228297	1.1186733	541	Signal recognition particle GTPase	U	signal recognition particle (srp54 family), putative	 0.000000e+00	 0	7.127079e-03	-3.722359e-04	 2.873537e-04	-9.118694e-02	6.236514e-01	0	 0	69	FALSE	FALSE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4950458	0.4741862	N	0.5492530	0.6245624
13773	129	184369	184370	1	  84	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.456060	3.228297	1.1186733	541	Signal recognition particle GTPase	U	signal recognition particle (srp54 family), putative	1.454102	3.203120	1.0850626	-	-	-	hypothetical protein	 0.000000e+00	 0	3.836091e-06	 1.264201e-05	 2.084882e-02	 1.703018e-02	3.681215e-04		69	 0	FALSE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5179424	0.6536833	U	0.4686274	0.6162291
13773	129	184370	184371	1	  20	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.454102	3.203120	1.0850626	-	-	-	hypothetical protein	1.531064	3.378650	1.1294534	1258	Predicted pseudouridylate synthase	J	conserved hypothetical protein	 0.000000e+00	 0	5.923193e-03	 2.158016e-04	 3.936170e-02	 8.301052e-02	3.173243e-01		 0	10	FALSE	FALSE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177057	0.5362123	U	0.4686274	0.6162291
13773	129	184371	184372	1	  29	Same	+	+	 0.000000	0	  0.000000	 -0.13353139	1.531064	3.378650	1.1294534	1258	Predicted pseudouridylate synthase	J	conserved hypothetical protein	1.441442	3.037261	1.0540496	519	GMP synthase, PP-ATPase domain/subunit	F	GMP synthetase (glutamine-hydrolysing)	 1.596409e-01	10	8.032100e-03	-7.928086e-04	-4.400011e-03	 1.576149e-03	4.654946e-01	0	10	56	FALSE	FALSE	114	 TRUE	0.4469764	0.2828094	0.5480306	0.4469764	0.7739415	1.0976286	0.5198398	0.5002274	N	0.5492530	0.5604716
13773	129	184372	184373	1	 191	Same	+	+	 0.000000	0	  0.000000	 -5.46168569	1.441442	3.037261	1.0540496	519	GMP synthase, PP-ATPase domain/subunit	F	GMP synthetase (glutamine-hydrolysing)	1.447659	3.196209	1.1223655	405	Gamma-glutamyltransferase	E	gamma-glutamyltransferase	 2.977471e-02	27	3.865303e-05	 3.715600e-05	 2.095606e-02	 1.360577e-04	3.225333e-03	0	56	27	FALSE	FALSE	115	 TRUE	0.4469764	0.1812706	0.5480306	0.4469764	0.7761702	0.7334991	0.5199484	0.6482245	N	0.5492530	0.5283954
13773	129	184373	184374	1	 596	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.447659	3.196209	1.1223655	405	Gamma-glutamyltransferase	E	gamma-glutamyltransferase	1.275677	2.793245	1.0092737	-	-	-	paREP2b	 0.000000e+00	 0	2.957779e-02	 6.561021e-04	 1.067836e-01	-5.759776e-02	1.068677e+00		27	 0	FALSE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5046912	0.4347792	U	0.4686274	0.6162291
13773	129	184374	184375	1	 124	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.275677	2.793245	1.0092737	-	-	-	paREP2b	1.488355	3.233072	1.0371237	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	 0.000000e+00	 0	4.523209e-02	-6.494906e-03	-1.301430e-01	-4.203889e-01	1.976797e+00		 0	 0	 TRUE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4152376	0.4082992	U	0.4686274	0.6162291
13773	129	184375	184376	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.488355	3.233072	1.0371237	1977	Molybdopterin converting factor, small subunit	H	conserved hypothetical protein	1.391594	2.979492	1.0223043	491	Zn-dependent hydrolases, including glyoxylases	R	beta-lactamase-like protein	 0.000000e+00	 0	9.362770e-03	-2.210318e-03	 5.055080e-04	-2.108565e-01	8.467389e-01		 0	18	FALSE	FALSE	116	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4614726	0.4508449	U	0.4686274	0.6162291
13773	129	184376	184377	1	 264	Divergent	-	+	 0.000000	0	  0.000000	 -1.11479277	1.391594	2.979492	1.0223043	491	Zn-dependent hydrolases, including glyoxylases	R	beta-lactamase-like protein	1.496427	3.334129	1.0919861	1489	DNA-binding protein, stimulates sugar fermentation	R	sugar fermentation stimulation protein, conjectural	 2.843585e-02	18	1.098995e-02	-2.692987e-03	-1.468021e-02	-2.356190e-01	9.425236e-01		18	26	 TRUE	FALSE	115	FALSE	0.4469764	0.2064359	0.5480306	0.4469764	0.7781393	0.7246741	0.4548918	0.4432769	U	0.4686274	0.5275674
13773	129	184377	184378	1	 -20	Convergent	+	-	 0.000000	0	  0.000000	 -0.35205230	1.496427	3.334129	1.0919861	1489	DNA-binding protein, stimulates sugar fermentation	R	sugar fermentation stimulation protein, conjectural	1.461660	3.092800	1.0375546	3342	Uncharacterized conserved protein	S	conserved hypothetical protein	 3.077255e-02	 5	1.208744e-03	 4.623699e-04	 2.126125e-02	 9.580112e-02	8.019807e-02		26	 5	FALSE	FALSE	116	FALSE	0.4469764	0.2474825	0.5480306	0.4469764	0.7448207	0.7360470	0.5180775	0.6143382	U	0.4686274	0.5405805
13773	129	184378	184379	1	  39	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.461660	3.092800	1.0375546	3342	Uncharacterized conserved protein	S	conserved hypothetical protein	1.456187	3.151223	1.0334352	491	Zn-dependent hydrolases, including glyoxylases	R	beta-lactamase-like protein	 3.891536e-03	 4	2.995376e-05	 4.922160e-05	 2.110387e-02	 2.822167e-02	3.225333e-03		 5	 4	 TRUE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.5343748	0.5173827	0.6482245	U	0.4686274	0.6162291
13773	129	184379	184380	1	 343	Same	+	+	 0.000000	0	  0.000000	 -0.23211222	1.456187	3.151223	1.0334352	491	Zn-dependent hydrolases, including glyoxylases	R	beta-lactamase-like protein	1.411738	2.998015	1.0700575	574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	G	pyruvate, phosphate dikinase	 3.186152e-03	 4	1.975683e-03	-1.901081e-04	 2.244986e-02	-4.238698e-02	1.940595e-01		 4	25	FALSE	FALSE	116	 TRUE	0.4469764	0.2694386	0.5480306	0.4469764	0.7323301	0.5200508	0.5083517	0.5817361	U	0.4686274	0.5475198
13773	129	184380	184381	1	 192	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.411738	2.998015	1.0700575	574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	G	pyruvate, phosphate dikinase	1.439164	3.019646	0.9816170	-	-	-	hypothetical protein	 0.000000e+00	 0	7.521911e-04	 4.849135e-04	 2.279384e-02	 5.498852e-03	7.846878e-02		25	 0	FALSE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5194238	0.6152238	U	0.4686274	0.6162291
13773	129	184381	184382	1	 388	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.439164	3.019646	0.9816170	-	-	-	hypothetical protein	1.526446	3.463963	1.0399952	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein part 2, authentic frameshift	 0.000000e+00	 0	7.617999e-03	-9.177779e-04	 2.393185e-02	-1.211444e-02	4.571545e-01		 0	 0	FALSE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178647	0.5026900	U	0.4686274	0.6162291
13773	129	184382	184383	1	  57	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.526446	3.463963	1.0399952	640	Predicted transcriptional regulators	K	P. aerophilum family 453, possible regulatory protein part 2, authentic frameshift	1.438163	3.599247	1.2080602	-	-	-	P. aerophilum family 453, possible regulatory protein part 1, authentic frameshift	 0.000000e+00	 0	7.793751e-03	-9.929113e-04	-4.732063e-03	-2.271457e-02	4.792082e-01		 0	 0	 TRUE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5144700	0.4968338	U	0.4686274	0.6162291
13773	129	184383	184384	1	  39	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.438163	3.599247	1.2080602	-	-	-	P. aerophilum family 453, possible regulatory protein part 1, authentic frameshift	1.335404	2.951318	0.9909608	-	-	-	hypothetical protein	 0.000000e+00	 0	1.055951e-02	 1.534479e-03	 7.239992e-02	 2.949978e-02	6.718212e-01		 0	 0	 TRUE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173840	0.4681425	U	0.4686274	0.6162291
13773	129	184384	184385	1	  54	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.335404	2.951318	0.9909608	-	-	-	hypothetical protein	1.501950	3.295474	1.0495263	1192	ATPases involved in chromosome partitioning	D	hypothetical protein	 0.000000e+00	 0	2.773754e-02	-5.864048e-03	-7.550054e-02	-4.418412e-01	1.880876e+00		 0	 0	 TRUE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4130607	0.4098972	U	0.4686274	0.6162291
13773	129	184385	184386	1	  68	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.501950	3.295474	1.0495263	1192	ATPases involved in chromosome partitioning	D	hypothetical protein	1.672408	3.496300	1.0448260	-	-	-	hypothetical protein	 0.000000e+00	 0	2.905610e-02	 1.117386e-02	 2.689442e-01	 4.930519e-01	1.900237e-01		 0	 0	 TRUE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6696858	0.5828520	U	0.4686274	0.6162291
13773	129	184386	184387	1	  40	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.672408	3.496300	1.0448260	-	-	-	hypothetical protein	1.524105	3.401145	1.0682468	-	-	-	hypothetical protein	 0.000000e+00	 0	2.199373e-02	 1.607061e-02	 9.801694e-02	 6.108284e-01	9.756633e-02		 0	 0	 TRUE	FALSE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7234635	0.6075710	U	0.4686274	0.6162291
13773	129	184387	184388	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.524105	3.401145	1.0682468	-	-	-	hypothetical protein	1.491872	3.328195	1.1227210	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.038971e-03	 2.943372e-03	 4.588694e-02	 2.911517e-01	3.477953e-02		 0	 0	 TRUE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5898755	0.6300598	U	0.4686274	0.6162291
13773	129	184388	184389	1	 111	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.491872	3.328195	1.1227210	-	-	-	conserved within P. aerophilum	1.529168	3.424869	1.1527120	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	1.390973e-03	 3.148307e-03	 6.874883e-02	 3.061452e-01	4.817739e-02		 0	 0	 TRUE	FALSE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5941250	0.6245582	U	0.4686274	0.6162291
13773	129	184389	184390	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.529168	3.424869	1.1527120	-	-	-	conserved within P. aerophilum	1.525580	3.377338	1.0970319	4917	Ethanolamine utilization protein	E	conserved within P. aerophilum	 0.000000e+00	 0	1.287505e-05	 5.769922e-03	 8.681652e-02	 4.390494e-01	4.953443e-04		 0	 0	FALSE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6521166	0.6533218	U	0.4686274	0.6162291
13773	129	184390	184391	1	  11	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.525580	3.377338	1.0970319	4917	Ethanolamine utilization protein	E	conserved within P. aerophilum	1.379675	3.069407	1.0779179	1607	Acyl-CoA hydrolase	I	acyl coenzyme A thioester hydrolase	 0.000000e+00	 0	2.128818e-02	-5.320521e-03	-4.238634e-02	-3.820430e-01	1.532427e+00	0	 0	 3	FALSE	FALSE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4225799	0.4162654	N	0.5492530	0.6245624
13773	129	184391	184392	1	  47	Divergent	-	+	 0.000000	0	  0.000000	 -0.26504093	1.379675	3.069407	1.0779179	1607	Acyl-CoA hydrolase	I	acyl coenzyme A thioester hydrolase	1.399214	3.096582	1.0653461	1701	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 8.710900e-02	 3	3.817686e-04	 3.742132e-03	 5.834411e-02	 2.515454e-01	2.475249e-02		 3	10	 TRUE	FALSE	112	FALSE	0.4469764	0.2605979	0.5480306	0.4469764	0.7136133	0.9694943	0.5699243	0.6354990	U	0.4686274	0.5447277
13773	129	184392	184393	1	 113	Convergent	+	-	 2.662588	0	  2.662588	  2.53753352	1.399214	3.096582	1.0653461	1701	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.494272	3.341402	1.1031191	1829	Predicted archaeal kinase (sugar kinase superfamily)	R	conserved hypothetical protein	 5.662889e-02	 2	9.035980e-03	-2.237374e-03	-7.667250e-03	-2.001827e-01	8.021450e-01		10	 2	FALSE	FALSE	113	FALSE	2.9244472	1.6943596	0.5480306	2.9399224	0.6838149	0.8734599	0.4648156	0.4553535	U	0.4686274	0.8454063
13773	129	184393	184394	1	  -7	Same	-	-	 0.000000	0	  0.000000	 -0.12505431	1.494272	3.341402	1.1031191	1829	Predicted archaeal kinase (sugar kinase superfamily)	R	conserved hypothetical protein	1.510165	3.314183	1.1025123	1893	Ketopantoate reductase	H	2-dehydropantoate 2-reductase (ketopantoate reductase)	 3.305270e-03	 2	2.526027e-04	 2.520112e-03	 5.430637e-02	 2.639260e-01	9.801456e-03		 2	20	 TRUE	FALSE	112	 TRUE	0.4469764	0.2924948	0.5480306	0.4469764	0.6838149	0.5221400	0.5753546	0.6429216	U	0.4686274	0.5547868
13773	129	184394	184395	1	  33	Divergent	-	+	 3.976562	0	  3.976562	 -0.39336177	1.510165	3.314183	1.1025123	1893	Ketopantoate reductase	H	2-dehydropantoate 2-reductase (ketopantoate reductase)	1.478012	3.196044	1.1009704	413	Ketopantoate hydroxymethyltransferase	H	3-methyl-2-oxobutanoate hydroxymethyltransferase	 4.062402e-02	20	1.033864e-03	 1.564454e-03	 3.205712e-02	 1.975104e-01	4.683919e-02	H	20	47	 TRUE	FALSE	111	FALSE	2.8636234	0.2434220	0.5480306	2.9099010	0.7777535	0.8050758	0.5493252	0.6252488	Y	1.4497162	0.5716244
13773	129	184395	184396	1	 199	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.478012	3.196044	1.1009704	413	Ketopantoate hydroxymethyltransferase	H	3-methyl-2-oxobutanoate hydroxymethyltransferase	1.444387	3.451149	1.1866703	1079	Uncharacterized ABC-type transport system, permease component	R	sugar transport permease protein	 0.000000e+00	 0	1.130616e-03	-1.864872e-04	 1.688248e-02	 1.045171e-02	1.019290e-01		47	 0	FALSE	FALSE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5188563	0.6058668	U	0.4686274	0.6162291
13773	129	184396	184397	1	  -9	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.444387	3.451149	1.1866703	1079	Uncharacterized ABC-type transport system, permease component	R	sugar transport permease protein	1.467387	3.557422	1.2104852	4603	ABC-type uncharacterized transport system, permease component	R	ribose ABC transporter, permease protein	 0.000000e+00	 0	5.289897e-04	-1.120510e-04	 1.995254e-02	 7.281738e-03	4.551984e-02		 0	 2	 TRUE	FALSE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5191923	0.6257919	U	0.4686274	0.6162291
13773	129	184397	184398	1	  -3	Same	-	-	 0.000000	0	  0.000000	 -0.07410797	1.467387	3.557422	1.2104852	4603	ABC-type uncharacterized transport system, permease component	R	ribose ABC transporter, permease protein	1.427099	3.125951	1.0848809	3845	ABC-type uncharacterized transport systems, ATPase components	R	ribose ABC transport system ATP-binding protein	 1.980709e-02	 2	1.623140e-03	-3.885610e-04	 1.704375e-02	-3.678211e-02	1.556100e-01		 2	 5	 TRUE	FALSE	110	 TRUE	0.4469764	0.2976889	0.5480306	0.4469764	0.6838149	0.6786740	0.5098922	0.5912363	U	0.4686274	0.5564209
13773	129	184398	184399	1	   2	Same	-	-	 0.000000	0	  0.000000	 -0.13864649	1.427099	3.125951	1.0848809	3845	ABC-type uncharacterized transport systems, ATPase components	R	ribose ABC transport system ATP-binding protein	1.414562	2.987466	1.0591599	1744	Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein	R	conserved hypothetical protein	 1.455905e-02	 5	1.571676e-04	 8.947810e-04	 3.314576e-02	 3.979894e-02	1.255500e-02		 5	11	 TRUE	FALSE	109	 TRUE	0.4469764	0.2783565	0.5480306	0.4469764	0.7448207	0.6358151	0.5181880	0.6417146	U	0.4686274	0.5503332
13773	129	184399	184400	1	 152	Same	-	-	 0.000000	0	  0.000000	 -0.11778304	1.414562	2.987466	1.0591599	1744	Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein	R	conserved hypothetical protein	1.474112	3.215897	1.1040878	1892	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 1.596264e-03	10	3.546192e-03	-8.367612e-04	 8.819929e-03	-8.040598e-02	3.234056e-01		11	10	 TRUE	FALSE	108	 TRUE	0.4469764	0.2945188	0.5480306	0.4469764	0.7739415	0.4888096	0.4977688	0.5336048	U	0.4686274	0.5554237
13773	129	184400	184401	1	  39	Same	-	-	 0.000000	0	  0.000000	 -0.57197031	1.474112	3.215897	1.1040878	1892	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.485991	3.217962	1.0963276	1236	Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	conserved hypothetical protein	 6.196037e-02	10	1.411150e-04	 7.860350e-04	 3.165733e-02	 1.272899e-01	1.238361e-02		10	15	 TRUE	FALSE	107	 TRUE	0.4469764	0.2318524	0.5480306	0.4469764	0.7739415	0.8917934	0.5236263	0.6418162	U	0.4686274	0.5356308
13773	129	184401	184402	1	  64	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.485991	3.217962	1.0963276	1236	Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	conserved hypothetical protein	1.575632	3.736657	1.1636582	-	-	-	paREP2b	 0.000000e+00	 0	8.035419e-03	 4.298430e-03	 1.071542e-01	 3.399729e-01	1.592641e-01		15	 0	 TRUE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6084792	0.5901897	U	0.4686274	0.6162291
13773	129	184402	184403	1	 282	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.575632	3.736657	1.1636582	-	-	-	paREP2b	1.496313	3.262830	1.1330624	301	Thiamine biosynthesis ATP pyrophosphatase	H	thiamine biosynthesis protein (thiI), probable	 0.000000e+00	 0	6.291372e-03	 5.580862e-03	 5.191710e-02	 3.925654e-01	1.119655e-01		 0	 6	 TRUE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6311944	0.6025456	U	0.4686274	0.6162291
13773	129	184403	184404	1	  18	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.496313	3.262830	1.1330624	301	Thiamine biosynthesis ATP pyrophosphatase	H	thiamine biosynthesis protein (thiI), probable	1.390492	2.925277	1.0337227	58	Glucan phosphorylase	G	conserved hypothetical protein	 8.421529e-03	 6	1.119807e-02	-2.735678e-03	-6.954282e-03	-2.404140e-01	9.619951e-01	0	 6	 7	 TRUE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7537284	0.5835606	0.4536163	0.4420467	N	0.5492530	0.6245624
13773	129	184404	184405	1	 424	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.390492	2.925277	1.0337227	58	Glucan phosphorylase	G	conserved hypothetical protein	1.471368	3.411565	1.1346539	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein, degenerate	 0.000000e+00	 0	6.540911e-03	-1.216514e-03	-1.891515e-03	-1.391870e-01	6.056017e-01		 7	 0	 TRUE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4796560	0.4761308	U	0.4686274	0.6162291
13773	129	184405	184406	1	 603	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.471368	3.411565	1.1346539	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein, degenerate	1.465330	3.143941	1.1005618	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	 0.000000e+00	 0	3.646021e-05	 2.784021e-04	 2.347282e-02	 6.221725e-02	3.053347e-03		 0	 2	FALSE	FALSE	104	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183969	0.6486369	U	0.4686274	0.6162291
13773	129	184406	184407	1	  93	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.465330	3.143941	1.1005618	2414	Aldehyde:ferredoxin oxidoreductase	C	aldehyde ferredoxin oxidoreductase (aor)	1.477419	3.199303	1.1062053	1449	Alpha-amylase/alpha-mannosidase	G	conserved hypothetical protein	 2.724640e-03	 2	1.461315e-04	 3.627259e-04	 2.620560e-02	 7.627183e-02	1.396859e-02	0	 2	 7	 TRUE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5092572	0.5178484	0.6410384	N	0.5492530	0.6245624
13773	129	184407	184408	1	   2	Same	+	+	 2.856470	0	  5.519058	  5.51905803	1.477419	3.199303	1.1062053	1449	Alpha-amylase/alpha-mannosidase	G	conserved hypothetical protein	1.482965	3.149852	1.1103479	297	Glycogen synthase	G	glycogen synthase (starch (bacterial glycogen) synthase), putative	 1.017063e-03	 7	3.076612e-05	 8.216946e-04	 3.115650e-02	 1.326239e-01	2.191648e-03	G	 7	26	FALSE	FALSE	104	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.7596462	0.4702064	0.5251564	0.6499017	Y	1.4497162	0.9052318
13773	129	184408	184409	1	  30	Same	+	+	13.552950	0	 25.845246	 24.32755182	1.482965	3.149852	1.1103479	297	Glycogen synthase	G	glycogen synthase (starch (bacterial glycogen) synthase), putative	1.481110	3.119291	1.0538423	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	glucose-1-phosphate adenylyltransferase	 9.663835e-02	20	3.441306e-06	 9.382488e-04	 3.141922e-02	 1.457372e-01	1.702194e-04		26	20	FALSE	FALSE	105	 TRUE	2.6017854	1.9403913	0.5480306	2.5215647	0.7777535	1.0000170	0.5292096	0.6547351	U	0.4686274	0.8861994
13773	129	184409	184410	1	 -23	Convergent	+	-	 0.000000	0	  0.000000	 -0.24140159	1.481110	3.119291	1.0538423	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	glucose-1-phosphate adenylyltransferase	1.454768	3.113863	1.0831214	2106	Uncharacterized conserved protein	S	conserved hypothetical protein	 6.252084e-05	 7	6.939304e-04	 1.002899e-04	 1.969654e-02	 4.809905e-02	6.106930e-02		20	 7	FALSE	FALSE	106	FALSE	0.4469764	0.2682666	0.5480306	0.4469764	0.7596462	0.4396706	0.5187418	0.6200599	U	0.4686274	0.5471498
13773	129	184410	184411	1	   1	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.454768	3.113863	1.0831214	2106	Uncharacterized conserved protein	S	conserved hypothetical protein	1.437254	2.774469	1.0193066	-	-	-	hypothetical protein	 0.000000e+00	 0	3.067402e-04	-4.771688e-05	 2.065854e-02	-5.508276e-03	2.929010e-02		 7	 0	 TRUE	FALSE	105	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5196099	0.6334684	U	0.4686274	0.6162291
13773	129	184411	184412	1	  86	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.437254	2.774469	1.0193066	-	-	-	hypothetical protein	1.559662	3.626043	1.2273226	-	-	-	paREP2b	 0.000000e+00	 0	1.498378e-02	-1.530839e-03	 3.209960e-02	-3.331352e-02	6.693073e-01		 0	 0	 TRUE	FALSE	104	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5112804	0.4688853	U	0.4686274	0.6162291
13773	129	184412	184413	1	  71	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.559662	3.626043	1.2273226	-	-	-	paREP2b	1.503657	3.622126	1.1692871	201	Preprotein translocase subunit SecY	U	preprotein translocase secY subunit	 0.000000e+00	 0	3.136543e-03	 5.658594e-03	 6.406775e-02	 4.104702e-01	6.031303e-02		 0	12	 TRUE	FALSE	103	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6387864	0.6204913	U	0.4686274	0.6162291
13773	129	184413	184414	1	  -3	Same	-	-	17.314937	0	 27.781368	 27.64783694	1.503657	3.622126	1.1692871	201	Preprotein translocase subunit SecY	U	preprotein translocase secY subunit	1.652173	3.471939	1.0424998	200	Ribosomal protein L15	J	ribosomal protein L15	 2.789541e-01	 9	2.205699e-02	 1.049361e-02	 2.388696e-01	 4.950027e-01	1.642022e-01	0	12	 9	 TRUE	FALSE	102	 TRUE	2.5074829	1.9530530	0.5480306	2.4788355	0.7702221	1.2100979	0.6714404	0.5889325	N	0.5492530	0.8924202
13773	129	184414	184415	1	  36	Same	-	-	 0.000000	0	  0.000000	 -0.11778304	1.652173	3.471939	1.0424998	200	Ribosomal protein L15	J	ribosomal protein L15	1.496759	3.263330	1.1027567	1940	Transcriptional regulator/sugar kinase	KG	glucokinase (ROK family protein), conjectural	 2.897501e-02	 9	2.415355e-02	 9.108602e-03	 3.009013e-02	 4.519590e-01	2.036413e-01		 9	30	 TRUE	FALSE	101	 TRUE	0.4469764	0.2945188	0.5480306	0.4469764	0.7702221	0.7271808	0.6573932	0.5784676	U	0.4686274	0.5554237
13773	129	184415	184416	1	 101	Divergent	-	+	 0.000000	0	  0.000000	 -3.37083372	1.496759	3.263330	1.1027567	1940	Transcriptional regulator/sugar kinase	KG	glucokinase (ROK family protein), conjectural	1.479852	3.165856	1.0952465	334	Glutamate dehydrogenase/leucine dehydrogenase	E	glutamate dehydrogenase	 2.491877e-04	30	2.858420e-04	 1.291080e-03	 3.266367e-02	 1.755144e-01	1.451812e-02		30	38	 TRUE	FALSE	100	FALSE	0.4469764	0.1881260	0.5480306	0.4469764	0.7754515	0.4455208	0.5404755	0.6405817	U	0.4686274	0.5217494
13773	129	184416	184417	1	 -17	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.479852	3.165856	1.0952465	334	Glutamate dehydrogenase/leucine dehydrogenase	E	glutamate dehydrogenase	1.518403	3.300654	1.1145888	-	-	-	conserved hypothetical protein part 2, authentic frameshift	 0.000000e+00	 0	1.486140e-03	 1.907040e-03	 5.238167e-02	 2.217611e-01	6.144920e-02		38	 0	FALSE	FALSE	101	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5580296	0.6199051	U	0.4686274	0.6162291
13773	129	184417	184418	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.518403	3.300654	1.1145888	-	-	-	conserved hypothetical protein part 2, authentic frameshift	1.522729	3.278875	1.0189847	121	Predicted glutamine amidotransferase	R	conserved hypothetical protein part 1, authentic frameshift	 0.000000e+00	 0	1.871849e-05	 4.780212e-03	 7.814930e-02	 3.881991e-01	6.031303e-04		 0	 0	 TRUE	FALSE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6294088	0.6529329	U	0.4686274	0.6162291
13773	129	184418	184419	1	 146	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.522729	3.278875	1.0189847	121	Predicted glutamine amidotransferase	R	conserved hypothetical protein part 1, authentic frameshift	1.388011	2.960141	1.0368927	174	Glutamine synthetase	E	glutamine synthetase	 0.000000e+00	 0	1.814894e-02	-4.521418e-03	-3.484931e-02	-3.291890e-01	1.330544e+00		 0	26	 TRUE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4329986	0.4229102	U	0.4686274	0.6162291
13773	129	184419	184420	1	 327	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.388011	2.960141	1.0368927	174	Glutamine synthetase	E	glutamine synthetase	1.525243	3.194251	1.0713028	67	Glutamate synthase domain 1	E	glutamate synthase subunit, conjectural	 1.190151e-02	 2	1.883262e-02	-4.680760e-03	-3.034285e-02	-3.363453e-01	1.362604e+00	E	26	 2	 TRUE	FALSE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.6132969	0.4308323	0.4216139	Y	1.4497162	0.7118045
13773	129	184420	184421	1	  -3	Same	+	+	 2.856470	0	  5.519058	  5.51905803	1.525243	3.194251	1.0713028	67	Glutamate synthase domain 1	E	glutamate synthase subunit, conjectural	1.593699	3.464907	1.1384760	69	Glutamate synthase domain 2	E	glutamate synthase subunit, conjectural	 1.242508e-01	 2	4.686168e-03	 1.050930e-02	 1.811927e-01	 5.555925e-01	4.262022e-02	E	 2	 2	FALSE	FALSE	 99	 TRUE	2.8950318	1.7912907	0.5480306	2.8617306	0.6838149	1.0601895	0.7016080	0.6270113	Y	1.4497162	0.9052318
13773	129	184421	184422	1	 -26	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.593699	3.464907	1.1384760	69	Glutamate synthase domain 2	E	glutamate synthase subunit, conjectural	1.609087	3.629184	1.0825689	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved within P. aerophilum	 0.000000e+00	 0	2.367978e-04	 2.244076e-02	 2.948449e-01	 7.545813e-01	6.808775e-04		 2	 0	FALSE	FALSE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7676068	0.6526075	U	0.4686274	0.6162291
13773	129	184422	184423	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.609087	3.629184	1.0825689	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved within P. aerophilum	1.519914	3.361954	1.1200731	75	Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	E	aminotransferase, class-V	 0.000000e+00	 0	7.951757e-03	 1.080540e-02	 9.584997e-02	 5.468177e-01	6.848886e-02		 0	41	 TRUE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6977079	0.6183298	U	0.4686274	0.6162291
13773	129	184423	184424	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.519914	3.361954	1.1200731	75	Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	E	aminotransferase, class-V	1.480420	3.426500	1.1378221	-	-	-	hypothetical protein	 0.000000e+00	 0	1.559758e-03	 1.989008e-03	 3.421008e-02	 2.279597e-01	6.375334e-02		41	 0	 TRUE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5613553	0.6194066	U	0.4686274	0.6162291
13773	129	184424	184425	1	 180	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.480420	3.426500	1.1378221	-	-	-	hypothetical protein	1.564119	3.438725	1.0956562	-	-	-	hypothetical protein	 0.000000e+00	 0	7.005425e-03	 3.272161e-03	 8.912685e-02	 2.903100e-01	1.781708e-01		 0	 0	 TRUE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5896282	0.5854446	U	0.4686274	0.6162291
13773	129	184425	184426	1	  48	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.564119	3.438725	1.0956562	-	-	-	hypothetical protein	1.518398	3.135700	1.0428241	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.090440e-03	 7.553166e-03	 8.818295e-02	 4.818298e-01	3.225098e-02		 0	 0	 TRUE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6672490	0.6314500	U	0.4686274	0.6162291
13773	129	184426	184427	1	  86	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.518398	3.135700	1.0428241	-	-	-	conserved within P. aerophilum	1.578096	3.523737	1.1311529	746	Molybdopterin-guanine dinucleotide biosynthesis protein A	H	molybdopterin-guanine dinucleotide biosynthesis protein A	 0.000000e+00	 0	3.563869e-03	 8.489678e-03	 1.493682e-01	 5.010281e-01	4.454270e-02		 0	 0	 TRUE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6728526	0.6261253	U	0.4686274	0.6162291
13773	129	184427	184428	1	  51	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.578096	3.523737	1.1311529	746	Molybdopterin-guanine dinucleotide biosynthesis protein A	H	molybdopterin-guanine dinucleotide biosynthesis protein A	1.447770	3.196108	1.1088351	1449	Alpha-amylase/alpha-mannosidase	G	pullulanase	 0.000000e+00	 0	1.698485e-02	-4.590586e-04	-2.536468e-02	 5.041792e-02	5.772734e-01	0	 0	 0	 TRUE	FALSE	 94	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187841	0.4802448	N	0.5492530	0.6245624
13773	129	184428	184429	1	  32	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.447770	3.196108	1.1088351	1449	Alpha-amylase/alpha-mannosidase	G	pullulanase	1.466083	3.230318	1.0862493	2182	Maltose-binding periplasmic proteins/domains	G	maltose ABC transporter, maltose binding protein	 0.000000e+00	 0	3.353866e-04	-5.322516e-05	 2.063008e-02	 1.399451e-02	2.773516e-02	G	 0	20	FALSE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182347	0.6341446	Y	1.4497162	0.7118045
13773	129	184429	184430	1	   1	Same	+	+	 5.598422	0	  8.411833	  8.30338097	1.466083	3.230318	1.0862493	2182	Maltose-binding periplasmic proteins/domains	G	maltose ABC transporter, maltose binding protein	1.477883	3.506428	1.1581356	1175	ABC-type sugar transport systems, permease components	G	maltose ABC transporter, permease protein	-3.777206e-02	14	1.392227e-04	 3.891458e-04	 2.652163e-02	 7.924390e-02	1.433377e-02	G	20	14	FALSE	FALSE	 96	 TRUE	2.7948173	1.8231938	0.5480306	2.7929181	0.7782928	0.5246514	0.5177863	0.6407068	Y	1.4497162	0.9096879
13773	129	184430	184431	1	 -10	Same	+	+	11.056209	0	 11.056209	 10.44286798	1.477883	3.506428	1.1581356	1175	ABC-type sugar transport systems, permease components	G	maltose ABC transporter, permease protein	1.458940	3.605643	1.1919351	3833	ABC-type maltose transport systems, permease component	G	maltose ABC transporter, permease protein	 5.083343e-02	14	3.588148e-04	 1.999261e-04	 2.143795e-02	 5.789874e-02	3.280463e-02	G	14	24	FALSE	FALSE	 97	 TRUE	2.6417794	1.8494343	0.5480306	2.7282488	0.7782928	0.8418369	0.5186503	0.6312229	Y	1.4497162	0.9139020
13773	129	184431	184432	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.458940	3.605643	1.1919351	3833	ABC-type maltose transport systems, permease component	G	maltose ABC transporter, permease protein	1.379263	2.853371	1.0930775	-	-	-	hypothetical protein	 0.000000e+00	 0	6.348402e-03	-5.443841e-04	 2.744018e-02	-9.803164e-02	5.702974e-01		24	 0	FALSE	FALSE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4923903	0.4815115	U	0.4686274	0.6162291
13773	129	184432	184433	1	  41	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.379263	2.853371	1.0930775	-	-	-	hypothetical protein	1.491825	3.248776	1.0728819	-	-	-	hypothetical protein	 0.000000e+00	 0	1.267004e-02	-2.916321e-03	-2.242159e-02	-2.669894e-01	1.086202e+00		 0	 0	 TRUE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4480012	0.4339027	U	0.4686274	0.6162291
13773	129	184433	184434	1	  25	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.491825	3.248776	1.0728819	-	-	-	hypothetical protein	1.485592	3.385946	1.1409496	501	Zn-dependent protease with chaperone function	O	heat shock protein, htpX homolog, conjectural	 0.000000e+00	 0	3.884682e-05	 1.382723e-03	 3.572362e-02	 1.872755e-01	1.654485e-03		 0	27	 TRUE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5449334	0.6507995	U	0.4686274	0.6162291
13773	129	184434	184435	1	 552	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.485592	3.385946	1.1409496	501	Zn-dependent protease with chaperone function	O	heat shock protein, htpX homolog, conjectural	1.462474	3.190485	1.0247258	-	-	-	hypothetical protein	 0.000000e+00	 0	5.344330e-04	 3.789649e-04	 2.251035e-02	 8.397293e-02	4.389716e-02		27	 0	 TRUE	FALSE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176852	0.6263686	U	0.4686274	0.6162291
13773	129	184435	184436	1	   5	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.462474	3.190485	1.0247258	-	-	-	hypothetical protein	1.447970	3.166070	1.1249100	1910	Periplasmic molybdate-binding protein/domain	P	molybdenum cofactor biosynthesis protein (moaA)	 0.000000e+00	 0	2.103592e-04	-3.792633e-05	 2.001216e-02	 1.279885e-02	1.972483e-02		 0	10	FALSE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184879	0.6377141	U	0.4686274	0.6162291
13773	129	184436	184437	1	   1	Convergent	+	-	 7.401231	0	  9.991498	  9.97347992	1.447970	3.166070	1.1249100	1910	Periplasmic molybdate-binding protein/domain	P	molybdenum cofactor biosynthesis protein (moaA)	1.506215	3.319689	1.1388802	303	Molybdopterin biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)	 1.982839e-03	10	3.392481e-03	-1.876347e-04	 2.614655e-02	 3.419466e-02	2.308128e-01	0	10	24	FALSE	FALSE	 97	FALSE	2.7376853	1.8393078	0.5480306	2.7601725	0.7739415	0.4965776	0.5175226	0.5706964	N	0.5492530	0.8745979
13773	129	184437	184438	1	 -70	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.506215	3.319689	1.1388802	303	Molybdopterin biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)	1.424211	3.193789	1.1178774	-	-	-	hypothetical protein	 0.000000e+00	 0	6.724632e-03	-1.490152e-03	-2.441807e-03	-9.883091e-02	5.259867e-01		24	 0	 TRUE	FALSE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4916052	0.4884610	U	0.4686274	0.6162291
13773	129	184438	184439	1	 -29	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.424211	3.193789	1.1178774	-	-	-	hypothetical protein	1.469080	3.227631	1.0559735	121	Predicted glutamine amidotransferase	R	conserved hypothetical protein	 0.000000e+00	 0	2.013201e-03	-4.807655e-04	 1.403464e-02	-4.746117e-02	1.960933e-01		 0	 4	FALSE	FALSE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5071886	0.5808669	U	0.4686274	0.6162291
13773	129	184439	184440	1	   0	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.469080	3.227631	1.0559735	121	Predicted glutamine amidotransferase	R	conserved hypothetical protein	1.441673	2.994574	1.0187828	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family, putative	 7.595820e-03	 4	7.511553e-04	-1.719192e-04	 1.817303e-02	 1.401807e-03	6.531300e-02		 4	 6	 TRUE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.7323301	0.5735148	0.5198503	0.6189979	U	0.4686274	0.6162291
13773	129	184440	184441	1	  31	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.441673	2.994574	1.0187828	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family, putative	1.596176	3.449104	1.0797043	-	-	-	hypothetical protein	 0.000000e+00	 0	2.387113e-02	-1.407281e-03	 5.727687e-02	 4.625962e-03	7.322526e-01		 6	 0	 TRUE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5195466	0.4614144	U	0.4686274	0.6162291
13773	129	184441	184442	1	 228	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.596176	3.449104	1.0797043	-	-	-	hypothetical protein	1.486860	3.342699	1.0809355	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family, putative	 0.000000e+00	 0	1.194990e-02	 5.135059e-03	 3.073934e-02	 3.661119e-01	1.900237e-01		 0	32	 TRUE	FALSE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6181333	0.5828520	U	0.4686274	0.6162291
13773	129	184442	184443	1	  75	Divergent	-	+	 0.000000	0	  0.000000	 -0.80701540	1.486860	3.342699	1.0809355	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family, putative	1.477023	3.301517	1.0879652	1890	Ribosomal protein S3AE	J	ribosomal protein S3	 5.477931e-02	11	9.677483e-05	 9.090225e-04	 2.983989e-02	 1.425944e-01	8.062744e-03	0	32	11	 TRUE	FALSE	 93	FALSE	0.4469764	0.2179197	0.5480306	0.4469764	0.7764261	0.8679653	0.5282879	0.6440495	N	0.5492530	0.5400140
13773	129	184443	184444	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	 -0.74160252	1.477023	3.301517	1.0879652	1890	Ribosomal protein S3AE	J	ribosomal protein S3	1.424201	2.960642	0.9943893	1094	Predicted RNA-binding protein (contains KH domains)	R	conserved hypothetical protein	 2.561589e-01	10	2.790094e-03	-6.969139e-04	 1.279865e-02	-6.125895e-02	2.683606e-01		11	10	FALSE	FALSE	 94	FALSE	0.4469764	0.2217490	0.5480306	0.4469764	0.7739415	1.1936934	0.5035652	0.5545399	U	0.4686274	0.5324275
13773	129	184444	184445	1	  45	Divergent	-	+	18.293529	0	 20.490754	 20.49075354	1.424201	2.960642	0.9943893	1094	Predicted RNA-binding protein (contains KH domains)	R	conserved hypothetical protein	1.445773	3.056302	1.0590086	1718	Serine/threonine protein kinase involved in cell cycle control	TD	conserved hypothetical protein	 1.890957e-01	10	4.653202e-04	 1.528210e-04	 2.072708e-02	-7.009033e-03	4.885355e-02		10	11	 TRUE	FALSE	 93	FALSE	2.4711213	1.9194271	0.5480306	2.5896816	0.7739415	1.1270741	0.5193871	0.6242586	U	0.4686274	0.8851350
13773	129	184445	184446	1	 -29	Convergent	+	-	 0.000000	0	  0.000000	 -0.22303471	1.445773	3.056302	1.0590086	1718	Serine/threonine protein kinase involved in cell cycle control	TD	conserved hypothetical protein	1.476672	3.224909	1.0680170	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	indolepyruvate ferredoxin oxidoreductase beta subunit	-1.050550e-02	 9	9.547465e-04	-1.420714e-04	 2.061913e-02	 1.278118e-02	8.685076e-02		11	 9	FALSE	FALSE	 94	FALSE	0.4469764	0.2701025	0.5480306	0.4469764	0.7702221	0.5247367	0.5185094	0.6122969	U	0.4686274	0.5477293
13773	129	184446	184447	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.476672	3.224909	1.0680170	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	indolepyruvate ferredoxin oxidoreductase beta subunit	1.458104	3.223126	1.0948788	4231	Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	C	indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift	 0.000000e+00	 0	3.447527e-04	 1.696528e-04	 2.121291e-02	 5.214721e-02	3.115780e-02	C	 9	 0	 TRUE	FALSE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187815	0.6322033	Y	1.4497162	0.7118045
13773	129	184447	184448	1	  36	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.458104	3.223126	1.0948788	4231	Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	C	indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift	1.510086	3.386617	1.1121394	4231	Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	C	indolepyruvate ferredoxin oxidoreductase alpha subunit part 1, authentic frameshift	 0.000000e+00	 0	2.702133e-03	 3.939068e-04	 3.397734e-02	 8.843398e-02	1.666996e-01	C	 0	 0	 TRUE	FALSE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177457	0.5883689	Y	1.4497162	0.7118045
13773	129	184448	184449	1	  84	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.510086	3.386617	1.1121394	4231	Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits	C	indolepyruvate ferredoxin oxidoreductase alpha subunit part 1, authentic frameshift	1.430055	2.835598	1.0196239	1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	K	transcription associated protein, conjectural	 0.000000e+00	 0	6.405067e-03	-1.252418e-03	-1.498001e-03	-6.545848e-02	4.634025e-01	0	 0	 0	 TRUE	FALSE	 91	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5023978	0.5009016	N	0.5492530	0.6245624
13773	129	184449	184450	1	 120	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.430055	2.835598	1.0196239	1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	K	transcription associated protein, conjectural	1.385896	3.024794	1.0365126	1259	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.949966e-03	 1.397593e-03	 4.681649e-02	 6.305715e-02	1.833917e-01		 0	 7	FALSE	FALSE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5183590	0.5843367	U	0.4686274	0.6162291
13773	129	184450	184451	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.385896	3.024794	1.0365126	1259	Uncharacterized conserved protein	S	conserved hypothetical protein	1.432213	2.949006	1.0287966	-	-	-	hypothetical protein	 0.000000e+00	 0	2.145255e-03	 1.256220e-03	 2.546591e-02	 4.802366e-02	2.078184e-01		 7	 0	FALSE	FALSE	 93	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187350	0.5771537	U	0.4686274	0.6162291
13773	129	184451	184452	1	 -19	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.432213	2.949006	1.0287966	-	-	-	hypothetical protein	1.439861	3.092728	1.0758769	-	-	-	hypothetical protein	 0.000000e+00	 0	5.848809e-05	 2.211847e-04	 2.272737e-02	 9.482810e-04	6.008332e-03		 0	 0	 TRUE	FALSE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199062	0.6454790	U	0.4686274	0.6162291
13773	129	184452	184453	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.439861	3.092728	1.0758769	-	-	-	hypothetical protein	1.468560	3.268688	1.0724256	184	Ribosomal protein S15P/S13E	J	ribosomal protein S13	 0.000000e+00	 0	8.236753e-04	-1.979791e-04	 1.883360e-02	-2.729400e-03	7.010506e-02		 0	12	 TRUE	FALSE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198933	0.6177812	U	0.4686274	0.6162291
13773	129	184453	184454	1	 -61	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.468560	3.268688	1.0724256	184	Ribosomal protein S15P/S13E	J	ribosomal protein S13	1.403645	3.044916	1.0509100	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	 0.000000e+00	 0	4.214028e-03	-8.197183e-04	 1.619459e-02	-9.669875e-02	4.028304e-01		12	 0	 TRUE	FALSE	 90	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4932647	0.5119762	U	0.4686274	0.6162291
13773	129	184454	184455	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.403645	3.044916	1.0509100	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein	1.500280	3.303510	1.1084920	1899	Deoxyhypusine synthase	O	deoxyhypusine synthase	 0.000000e+00	 0	9.338408e-03	-2.334277e-03	-6.275674e-03	-1.939818e-01	7.925509e-01		 0	17	FALSE	FALSE	 91	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4660927	0.4565008	U	0.4686274	0.6162291
13773	129	184455	184456	1	   2	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.500280	3.303510	1.1084920	1899	Deoxyhypusine synthase	O	deoxyhypusine synthase	1.454095	3.459131	1.1660987	472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	M	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	 0.000000e+00	 0	2.133133e-03	 1.320774e-04	 1.623111e-02	 6.140149e-02	1.514004e-01	0	17	 0	FALSE	FALSE	 92	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184463	0.5927845	N	0.5492530	0.6245624
13773	129	184456	184457	1	  18	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.454095	3.459131	1.1660987	472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	M	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	1.391093	3.466085	1.1290702	-	-	-	hypothetical protein	 0.000000e+00	 0	3.969250e-03	-1.629110e-04	 2.804834e-02	-5.964452e-02	3.788436e-01		 0	 0	FALSE	FALSE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5037935	0.5175511	U	0.4686274	0.6162291
13773	129	184457	184458	1	 118	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.391093	3.466085	1.1290702	-	-	-	hypothetical protein	1.418430	3.147212	1.0643129	1159	GTPase	R	conserved within P. aerophilum	 0.000000e+00	 0	7.473326e-04	 1.987676e-03	 3.750349e-02	 1.151101e-01	6.889114e-02		 0	 0	FALSE	FALSE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5211120	0.6181692	U	0.4686274	0.6162291
13773	129	184458	184459	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.418430	3.147212	1.0643129	1159	GTPase	R	conserved within P. aerophilum	1.449004	3.221455	1.1100557	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	9.347651e-04	 7.874871e-05	 1.891362e-02	-1.713267e-02	9.376850e-02		 0	 0	FALSE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5161866	0.6094409	U	0.4686274	0.6162291
13773	129	184459	184460	1	 -31	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.449004	3.221455	1.1100557	-	-	-	conserved within P. aerophilum	1.437739	3.215331	1.1088902	561	Predicted hydrolases of the HAD superfamily	R	conserved hypothetical protein	 0.000000e+00	 0	1.268963e-04	 3.261912e-05	 2.157802e-02	-2.940260e-03	1.290133e-02		 0	 8	FALSE	FALSE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5198717	0.6415107	U	0.4686274	0.6162291
13773	129	184460	184461	1	 171	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.437739	3.215331	1.1088902	561	Predicted hydrolases of the HAD superfamily	R	conserved hypothetical protein	1.364633	3.107985	1.0389980	-	-	-	hypothetical protein	 0.000000e+00	 0	5.344522e-03	 1.184608e-03	 5.323070e-02	 2.787122e-02	4.335965e-01		 8	 0	 TRUE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173817	0.5065808	U	0.4686274	0.6162291
13773	129	184461	184462	1	  47	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.364633	3.107985	1.0389980	-	-	-	hypothetical protein	1.423513	3.038676	1.0849705	491	Zn-dependent hydrolases, including glyoxylases	R	hypothetical protein	 0.000000e+00	 0	3.466920e-03	 2.418829e-03	 3.187753e-02	 1.313163e-01	2.604681e-01		 0	 0	 TRUE	FALSE	 94	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5247837	0.5576556	U	0.4686274	0.6162291
13773	129	184462	184463	1	 -24	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.423513	3.038676	1.0849705	491	Zn-dependent hydrolases, including glyoxylases	R	hypothetical protein	1.365044	3.026124	1.0867107	1833	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	3.418649e-03	 2.407361e-03	 6.584620e-02	 1.308834e-01	2.581233e-01		 0	 2	FALSE	FALSE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5245418	0.5591829	U	0.4686274	0.6162291
13773	129	184463	184464	1	  61	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.365044	3.026124	1.0867107	1833	Uncharacterized conserved protein	S	conserved hypothetical protein	1.520521	3.347956	1.1406227	846	NAD-dependent protein deacetylases, SIR2 family	K	conserved hypothetical protein	 1.022897e-02	 2	2.417298e-02	-5.969105e-03	-5.585414e-02	-4.364560e-01	1.750595e+00		 2	23	 TRUE	FALSE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6838149	0.5994940	0.4134977	0.4114287	U	0.4686274	0.6162291
13773	129	184464	184465	1	  68	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.520521	3.347956	1.1406227	846	NAD-dependent protein deacetylases, SIR2 family	K	conserved hypothetical protein	1.433895	2.686939	1.1798588	-	-	-	hypothetical protein	 0.000000e+00	 0	7.503948e-03	-1.209561e-03	-4.762805e-03	-4.234634e-02	4.824011e-01		23	 0	 TRUE	FALSE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5084194	0.4960755	U	0.4686274	0.6162291
13773	129	184465	184466	1	 536	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.433895	2.686939	1.1798588	-	-	-	hypothetical protein	1.514628	3.262009	1.0638383	-	-	-	hypothetical protein	 0.000000e+00	 0	6.517689e-03	-1.106447e-03	 1.717788e-02	-3.991026e-02	4.335965e-01		 0	 0	 TRUE	FALSE	 92	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5090922	0.5065808	U	0.4686274	0.6162291
13773	129	184466	184467	1	 350	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.514628	3.262009	1.0638383	-	-	-	hypothetical protein	1.594776	3.696163	1.1789319	-	-	-	hypothetical protein	 0.000000e+00	 0	6.423807e-03	 9.066816e-03	 1.688041e-01	 5.074952e-01	7.174011e-02		 0	 0	FALSE	FALSE	 93	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6757000	0.6173235	U	0.4686274	0.6162291
13773	129	184467	184468	1	 -24	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.594776	3.696163	1.1789319	-	-	-	hypothetical protein	1.498709	3.617785	1.1506403	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	9.228938e-03	 6.784338e-03	 5.353827e-02	 4.284051e-01	1.295558e-01		 0	 0	FALSE	FALSE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6466317	0.5982270	U	0.4686274	0.6162291
13773	129	184468	184469	1	  92	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.498709	3.617785	1.1506403	-	-	-	conserved hypothetical protein	1.847169	4.221520	1.1099943	-	-	-	hypothetical protein	 0.000000e+00	 0	1.214241e-01	 1.872654e-02	 6.317928e-01	 4.965517e-01	2.465584e-01		 0	 0	FALSE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6721456	0.5636133	U	0.4686274	0.6162291
13773	129	184469	184470	1	 224	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.847169	4.221520	1.1099943	-	-	-	hypothetical protein	1.395453	3.174057	1.1277048	1750	Archaeal serine proteases	R	conserved hypothetical protein	 0.000000e+00	 0	2.040472e-01	-2.213974e-02	-6.279640e-01	-4.614111e-01	2.128509e+00		 0	 3	FALSE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4104216	0.4069224	U	0.4686274	0.6162291
13773	129	184470	184471	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.395453	3.174057	1.1277048	1750	Archaeal serine proteases	R	conserved hypothetical protein	1.503207	3.532179	1.1561023	-	-	-	hypothetical protein	 0.000000e+00	 0	1.161091e-02	-2.898471e-03	-1.428117e-02	-2.433348e-01	9.771087e-01		 3	 0	FALSE	FALSE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4529721	0.4414343	U	0.4686274	0.6162291
13773	129	184471	184472	1	 142	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.503207	3.532179	1.1561023	-	-	-	hypothetical protein	1.417471	2.954517	1.0463351	-	-	-	hypothetical protein	 0.000000e+00	 0	7.350560e-03	-1.757607e-03	-3.708344e-03	-1.265019e-01	5.866408e-01		 0	 0	 TRUE	FALSE	 96	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4829501	0.4787644	U	0.4686274	0.6162291
13773	129	184472	184473	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.417471	2.954517	1.0463351	-	-	-	hypothetical protein	1.387701	3.047173	1.0314259	1961	Site-specific recombinases, DNA invertase Pin homologs	L	resolvase, conjectural	 0.000000e+00	 0	8.862440e-04	 2.160515e-03	 5.337866e-02	 1.253922e-01	7.803940e-02		 0	 4	FALSE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5230952	0.6154327	U	0.4686274	0.6162291
13773	129	184473	184474	1	  75	Convergent	+	-	 0.000000	0	  0.000000	 -0.26236426	1.387701	3.047173	1.0314259	1961	Site-specific recombinases, DNA invertase Pin homologs	L	resolvase, conjectural	1.417667	3.082490	1.0584816	2236	Predicted phosphoribosyltransferases	R	xanthine-guanine phosphoribosyltransferase, conjectural	 1.448039e-03	 4	8.979666e-04	 2.148016e-03	 3.843956e-02	 1.237948e-01	7.976398e-02		 4	12	FALSE	FALSE	 98	FALSE	0.4469764	0.2622094	0.5480306	0.4469764	0.7323301	0.4819640	0.5227417	0.6145887	U	0.4686274	0.5452369
13773	129	184474	184475	1	  48	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.417667	3.082490	1.0584816	2236	Predicted phosphoribosyltransferases	R	xanthine-guanine phosphoribosyltransferase, conjectural	1.587012	3.460911	1.0172648	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.867752e-02	-4.573799e-03	 1.107908e-02	-2.006645e-01	1.169319e+00		12	 0	 TRUE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4645295	0.4297294	U	0.4686274	0.6162291
13773	129	184475	184476	1	  -7	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.587012	3.460911	1.0172648	-	-	-	conserved within P. aerophilum	1.491405	3.179721	0.9761674	-	-	-	hypothetical protein	 0.000000e+00	 0	9.140731e-03	 5.426368e-03	 4.154196e-02	 3.799679e-01	1.544013e-01		 0	 0	 TRUE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6247145	0.5918248	U	0.4686274	0.6162291
13773	129	184476	184477	1	 316	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.491405	3.179721	0.9761674	-	-	-	hypothetical protein	1.392485	3.038334	1.0713044	504	CTP synthase (UTP-ammonia lyase)	F	CTP synthase (pyrG)	 0.000000e+00	 0	9.785190e-03	-2.357029e-03	-2.074411e-03	-2.160873e-01	8.651998e-01		 0	70	 TRUE	FALSE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4599820	0.4487631	U	0.4686274	0.6162291
13773	129	184477	184478	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	 -0.13353139	1.392485	3.038334	1.0713044	504	CTP synthase (UTP-ammonia lyase)	F	CTP synthase (pyrG)	1.502449	3.541712	1.1204014	838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	C	NADH-ubiquinone oxidoreductase subunit	 7.562104e-04	 1	1.209214e-02	-3.007620e-03	-1.662103e-02	-2.499545e-01	1.001536e+00	0	70	 1	FALSE	FALSE	 96	FALSE	0.4469764	0.2828094	0.5480306	0.4469764	0.6329203	0.4649491	0.4521609	0.4391251	N	0.5492530	0.5604716
13773	129	184478	184479	1	  47	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.502449	3.541712	1.1204014	838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	C	NADH-ubiquinone oxidoreductase subunit	1.446735	3.585552	1.2116785	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved within P. aerophilum	 0.000000e+00	 0	3.104026e-03	-2.378088e-04	 1.139249e-02	 2.679512e-02	2.206043e-01		 1	 0	 TRUE	FALSE	 95	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5173824	0.5741897	U	0.4686274	0.6162291
13773	129	184479	184480	1	  23	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.446735	3.585552	1.2116785	697	Permeases of the drug/metabolite transporter (DMT) superfamily	GER	conserved within P. aerophilum	1.536478	3.340087	1.1301968	496	Predicted acid phosphatase	R	surE stationary-phase survival protein homolog	 0.000000e+00	 0	8.053763e-03	-3.963091e-04	 3.443349e-02	 3.606884e-02	4.225499e-01		 0	 2	FALSE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177197	0.5083822	U	0.4686274	0.6162291
13773	129	184480	184481	1	 130	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.536478	3.340087	1.1301968	496	Predicted acid phosphatase	R	surE stationary-phase survival protein homolog	1.467782	3.182045	1.0366393	-	-	-	hypothetical protein	 0.000000e+00	 0	4.719071e-03	 1.394496e-03	 1.934003e-02	 1.728074e-01	2.071193e-01		 2	 0	FALSE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5391809	0.5774877	U	0.4686274	0.6162291
13773	129	184481	184482	1	   9	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.467782	3.182045	1.0366393	-	-	-	hypothetical protein	1.417721	3.154864	1.0944107	1199	Rad3-related DNA helicases	KL	hypothetical protein	 0.000000e+00	 0	2.506156e-03	-5.518668e-04	 1.648228e-02	-5.823270e-02	2.330303e-01		 0	 0	FALSE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5043201	0.5695312	U	0.4686274	0.6162291
13773	129	184482	184483	1	  22	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.417721	3.154864	1.0944107	1199	Rad3-related DNA helicases	KL	hypothetical protein	1.441285	3.277967	1.0477744	433	Predicted ATPase	R	conserved hypothetical protein	 0.000000e+00	 0	5.552636e-04	 3.403583e-04	 2.209741e-02	 3.628206e-04	5.515108e-02		 0	 0	FALSE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199291	0.6221915	U	0.4686274	0.6162291
13773	129	184483	184484	1	 410	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.441285	3.277967	1.0477744	433	Predicted ATPase	R	conserved hypothetical protein	1.471933	3.174599	1.0523486	675	Transposase and inactivated derivatives	L	paREP12, internal deletion	 0.000000e+00	 0	9.393029e-04	-2.076191e-04	 1.912208e-02	-4.334999e-04	8.063333e-02		 0	 0	FALSE	FALSE	100	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199833	0.6142303	U	0.4686274	0.6162291
13773	129	184484	184485	1	 142	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.471933	3.174599	1.0523486	675	Transposase and inactivated derivatives	L	paREP12, internal deletion	1.297072	2.938721	0.8081866	-	-	-	hypothetical protein	 0.000000e+00	 0	3.057638e-02	-3.169756e-03	 4.308297e-02	-2.683364e-01	1.519156e+00		 0	 0	 TRUE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4474900	0.4165262	U	0.4686274	0.6162291
13773	129	184485	184486	1	  84	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.297072	2.938721	0.8081866	-	-	-	hypothetical protein	1.404995	3.151734	0.9898241	-	-	-	hypothetical protein	 0.000000e+00	 0	1.164752e-02	 7.160089e-03	 4.944394e-02	 3.448998e-01	3.446943e-01		 0	 0	 TRUE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6106487	0.5259852	U	0.4686274	0.6162291
13773	129	184486	184487	1	  49	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.404995	3.151734	0.9898241	-	-	-	hypothetical protein	1.367187	2.998763	0.8920434	-	-	-	hypothetical protein	 0.000000e+00	 0	1.429448e-03	 3.906909e-03	 7.895805e-02	 2.482276e-01	1.029115e-01		 0	 0	 TRUE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5688795	0.6052131	U	0.4686274	0.6162291
13773	129	184487	184488	1	 221	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.367187	2.998763	0.8920434	-	-	-	hypothetical protein	1.277446	2.839537	0.8949825	-	-	-	hypothetical protein	 0.000000e+00	 0	8.053462e-03	 1.464724e-02	 2.508297e-01	 6.649140e-01	8.326967e-02		 0	 0	 TRUE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7417685	0.6130924	U	0.4686274	0.6162291
13773	129	184488	184489	1	 109	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.277446	2.839537	0.8949825	-	-	-	hypothetical protein	1.267787	2.911802	0.8166724	-	-	-	hypothetical protein	 0.000000e+00	 0	9.329838e-05	 3.193755e-02	 4.029310e-01	 9.537151e-01	7.126832e-05		 0	 0	 TRUE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.8119180	0.6552829	U	0.4686274	0.6162291
13773	129	184489	184490	1	 165	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.267787	2.911802	0.8166724	-	-	-	hypothetical protein	1.362355	3.094657	1.0740223	-	-	-	hypothetical protein	 0.000000e+00	 0	8.942987e-03	 1.634792e-02	 1.464055e-01	 6.977852e-01	7.256470e-02		 0	 0	 TRUE	FALSE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7509780	0.6171587	U	0.4686274	0.6162291
13773	129	184490	184491	1	 324	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.362355	3.094657	1.0740223	-	-	-	hypothetical protein	1.473073	3.298483	1.0341956	-	-	-	hypothetical protein	 0.000000e+00	 0	1.225865e-02	-1.930398e-03	-2.077212e-02	-2.091172e-01	1.010773e+00		 0	 0	 TRUE	FALSE	 93	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4619153	0.4386428	U	0.4686274	0.6162291
13773	129	184491	184492	1	 358	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.473073	3.298483	1.0341956	-	-	-	hypothetical protein	1.414157	3.080967	1.0637987	-	-	-	paREP2b	 0.000000e+00	 0	3.471099e-03	-8.072858e-04	 1.362597e-02	-7.918028e-02	3.173243e-01		 0	 0	FALSE	FALSE	 94	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4982296	0.5362123	U	0.4686274	0.6162291
13773	129	184492	184493	1	   7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.414157	3.080967	1.0637987	-	-	-	paREP2b	1.497281	3.323162	1.1430746	-	-	-	paREP2b	 0.000000e+00	 0	6.909569e-03	-1.708674e-03	 2.585958e-03	-1.314848e-01	5.737801e-01		 0	 0	FALSE	FALSE	 95	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4811310	0.4809145	U	0.4686274	0.6162291
13773	129	184493	184494	1	  61	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.497281	3.323162	1.1430746	-	-	-	paREP2b	1.386259	3.089411	1.0077108	-	-	-	hypothetical protein	 0.000000e+00	 0	1.232594e-02	-2.988886e-03	-8.783077e-03	-2.622203e-01	1.051294e+00		 0	 0	FALSE	FALSE	 96	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4491837	0.4359569	U	0.4686274	0.6162291
13773	129	184494	184495	1	  29	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.386259	3.089411	1.0077108	-	-	-	hypothetical protein	1.373655	3.116344	1.0639878	501	Zn-dependent protease with chaperone function	O	heat shock protein, htpX homolog, conjectural	 0.000000e+00	 0	1.588610e-04	 5.063372e-03	 8.451309e-02	 3.422057e-01	9.954005e-03		 0	 0	FALSE	FALSE	 97	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6092902	0.6428219	U	0.4686274	0.6162291
13773	129	184495	184496	1	 -16	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.373655	3.116344	1.0639878	501	Zn-dependent protease with chaperone function	O	heat shock protein, htpX homolog, conjectural	1.474565	3.187234	1.0022631	-	-	-	hypothetical protein	 0.000000e+00	 0	1.018277e-02	-1.801327e-03	-1.430710e-02	-1.984793e-01	8.998044e-01		 0	 0	FALSE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4649583	0.4463809	U	0.4686274	0.6162291
13773	129	184496	184497	1	  86	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.474565	3.187234	1.0022631	-	-	-	hypothetical protein	1.446098	3.342216	1.0732317	-	-	-	hypothetical protein	 0.000000e+00	 0	8.103765e-04	-1.227019e-04	 1.801069e-02	 1.291311e-02	7.297876e-02		 0	 0	FALSE	FALSE	 99	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5184450	0.6169600	U	0.4686274	0.6162291
13773	129	184497	184498	1	 186	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.446098	3.342216	1.0732317	-	-	-	hypothetical protein	1.439498	3.145241	1.0751773	434	Predicted TIM-barrel enzyme	R	conserved hypothetical protein	 0.000000e+00	 0	4.355469e-05	 6.298721e-05	 2.176226e-02	-6.043083e-04	3.138751e-03		 0	13	 TRUE	FALSE	 98	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199862	0.6484515	U	0.4686274	0.6162291
13773	129	184498	184499	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	 -0.75154502	1.439498	3.145241	1.0751773	434	Predicted TIM-barrel enzyme	R	conserved hypothetical protein	1.417258	2.961320	1.0408604	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	mannose-1-phosphate guanyltransferase	 5.239782e-02	13	4.946088e-04	 4.060292e-04	 2.808477e-02	 3.536322e-03	5.195461e-02		13	21	FALSE	FALSE	 99	FALSE	0.4469764	0.2212749	0.5480306	0.4469764	0.7781369	0.8494258	0.5196730	0.6232413	U	0.4686274	0.5322771
13773	129	184499	184500	1	   8	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.417258	2.961320	1.0408604	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	mannose-1-phosphate guanyltransferase	1.309528	2.893604	1.0246957	-	-	-	hypothetical protein	 0.000000e+00	 0	1.160581e-02	 4.842520e-03	 1.255081e-01	 2.242773e-01	4.654946e-01		21	 0	 TRUE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5591222	0.5002274	U	0.4686274	0.6162291
13773	129	184500	184501	1	  75	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.309528	2.893604	1.0246957	-	-	-	hypothetical protein	1.406191	3.128289	1.1033615	-	-	-	hypothetical protein	 0.000000e+00	 0	9.343776e-03	 6.412546e-03	 4.979438e-02	 3.229309e-01	3.313094e-01		 0	 0	 TRUE	FALSE	 97	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6013132	0.5307106	U	0.4686274	0.6162291
13773	129	184501	184502	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.406191	3.128289	1.1033615	-	-	-	hypothetical protein	1.387544	2.958596	0.9967840	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	HIT family protein	 0.000000e+00	 0	3.477186e-04	 2.886086e-03	 5.964669e-02	 1.822349e-01	2.981784e-02		 0	 7	FALSE	FALSE	 98	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5428240	0.6331508	U	0.4686274	0.6162291
13773	129	184502	184503	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.387544	2.958596	0.9967840	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	HIT family protein	1.405621	3.117972	1.0929542	-	-	-	hypothetical protein	 0.000000e+00	 0	3.267858e-04	 2.922480e-03	 4.987576e-02	 1.858395e-01	2.748012e-02		 7	 0	FALSE	FALSE	 99	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5446288	0.6342472	U	0.4686274	0.6162291
13773	129	184503	184504	1	   6	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.405621	3.117972	1.0929542	-	-	-	hypothetical protein	1.387602	3.171204	1.1024636	1412	Uncharacterized proteins of PilT N-term./Vapc superfamily	R	conserved hypothetical protein	 0.000000e+00	 0	3.247024e-04	 2.919838e-03	 5.989093e-02	 1.855662e-01	2.722627e-02		 0	 5	FALSE	FALSE	100	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5443252	0.6344003	U	0.4686274	0.6162291
13773	129	184504	184505	1	  86	Same	+	+	 5.174893	0	  7.372118	  7.10226548	1.387602	3.171204	1.1024636	1412	Uncharacterized proteins of PilT N-term./Vapc superfamily	R	conserved hypothetical protein	1.452845	3.137839	1.0590329	1095	DNA-directed RNA polymerase, subunit E'	K	DNA-directed RNA polymerase subunit E' (rpoE1)	 1.371616e-01	 5	4.256763e-03	-9.266400e-05	 9.325508e-03	-5.878930e-02	4.018567e-01		 5	12	FALSE	FALSE	101	 TRUE	2.8105485	1.8111795	0.5480306	2.8192517	0.7448207	1.0738329	0.5040955	0.5122596	U	0.4686274	0.8655276
13773	129	184505	184506	1	  -3	Same	+	+	21.712468	0	 34.769166	 34.76916632	1.452845	3.137839	1.0590329	1095	DNA-directed RNA polymerase, subunit E'	K	DNA-directed RNA polymerase subunit E' (rpoE1)	1.347898	2.879902	1.0271648	2093	DNA-directed RNA polymerase, subunit E''	K	DNA-directed RNA polymerase subunit E'' (rpoE2)	 3.229691e-01	10	1.101407e-02	-1.503386e-04	 4.617592e-02	-8.935281e-02	8.187264e-01	K	12	10	FALSE	FALSE	102	 TRUE	2.3237071	2.0000141	0.5480306	2.3514976	0.7739415	1.2322996	0.4954503	0.4531269	Y	1.4497162	0.9304439
13773	129	184506	184507	1	 -27	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.347898	2.879902	1.0271648	2093	DNA-directed RNA polymerase, subunit E''	K	DNA-directed RNA polymerase subunit E'' (rpoE2)	1.477362	3.323140	1.0954477	-	-	-	hypothetical protein	 0.000000e+00	 0	1.676103e-02	-2.687677e-03	-3.617615e-02	-2.692741e-01	1.281431e+00		10	 0	FALSE	FALSE	103	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4471478	0.4248766	U	0.4686274	0.6162291
13773	129	184507	184508	1	  45	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.477362	3.323140	1.0954477	-	-	-	hypothetical protein	1.388358	2.956561	1.0585255	13	Alanyl-tRNA synthetase	J	alanyl-tRNA synthetase	 0.000000e+00	 0	7.921748e-03	-1.636964e-03	 9.975785e-03	-1.745585e-01	7.283175e-01		 0	69	 TRUE	FALSE	102	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4718414	0.4619884	U	0.4686274	0.6162291
13773	129	184508	184509	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.50304325	1.388358	2.956561	1.0585255	13	Alanyl-tRNA synthetase	J	alanyl-tRNA synthetase	1.348779	2.966397	1.0169133	1308	Transcription factor homologous to NACalpha-BTF3	K	conserved hypothetical protein	 5.924755e-03	 6	1.566473e-03	 6.468276e-03	 1.130160e-01	 4.034942e-01	7.422802e-02	0	69	 6	FALSE	FALSE	103	 TRUE	0.4469764	0.2355917	0.5480306	0.4469764	0.7537284	0.5552173	0.6366355	0.6165928	N	0.5492530	0.5456018
13773	129	184509	184510	1	  48	Same	+	+	 0.000000	0	  0.000000	 -0.50304325	1.348779	2.966397	1.0169133	1308	Transcription factor homologous to NACalpha-BTF3	K	conserved hypothetical protein	1.370248	2.947173	1.0258334	197	Ribosomal protein L16/L10E	J	ribosomal protein L10	 1.689996e-01	 6	4.608999e-04	 8.326624e-03	 1.080764e-01	 5.168826e-01	1.642646e-02	0	 6	12	FALSE	FALSE	104	 TRUE	0.4469764	0.2355917	0.5480306	0.4469764	0.7537284	1.1107342	0.6818607	0.6394805	N	0.5492530	0.5456018
13773	129	184510	184511	1	 -25	Same	+	+	 0.000000	0	  0.000000	 -0.26504093	1.370248	2.947173	1.0258334	197	Ribosomal protein L16/L10E	J	ribosomal protein L10	1.436208	3.182042	1.0856177	4879	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 7.846874e-02	 3	4.350755e-03	 1.232190e-03	 1.900884e-02	 3.331470e-02	3.685226e-01		12	 3	FALSE	FALSE	105	 TRUE	0.4469764	0.2605979	0.5480306	0.4469764	0.7136133	0.9433797	0.5175102	0.5189918	U	0.4686274	0.5447277
13773	129	184511	184512	1	   4	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.436208	3.182042	1.0856177	4879	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.446472	3.255866	1.0988950	725	ABC-type molybdate transport system, periplasmic component	P	hypothetical protein	 0.000000e+00	 0	1.053446e-04	 7.472894e-05	 2.108738e-02	-2.371291e-03	9.499891e-03		 3	 0	FALSE	FALSE	106	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5199032	0.6431205	U	0.4686274	0.6162291
13773	129	184512	184513	1	 154	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.446472	3.255866	1.0988950	725	ABC-type molybdate transport system, periplasmic component	P	hypothetical protein	1.426247	3.574479	1.1960691	555	ABC-type sulfate transport system, permease component	O	sulfate ABC transporter, permease protein, putative	 0.000000e+00	 0	4.090331e-04	 1.237485e-04	 2.372885e-02	-7.437232e-03	4.230393e-02	0	 0	 1	 TRUE	FALSE	105	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5192999	0.6271652	N	0.5492530	0.6245624
13773	129	184513	184514	1	 -15	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.426247	3.574479	1.1960691	555	ABC-type sulfate transport system, permease component	O	sulfate ABC transporter, permease protein, putative	1.398169	3.117203	1.0303856	3839	ABC-type sugar transport systems, ATPase components	G	ABC transporter ATP-binding protein, putative	 0.000000e+00	 0	7.883862e-04	 1.338361e-03	 4.197433e-02	 6.961737e-02	7.803940e-02	0	 1	 0	FALSE	FALSE	106	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5181128	0.6154327	N	0.5492530	0.6245624
13773	129	184514	184515	1	  -5	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.398169	3.117203	1.0303856	3839	ABC-type sugar transport systems, ATPase components	G	ABC transporter ATP-binding protein, putative	1.414256	3.173078	1.0830479	1506	Dipeptidyl aminopeptidases/acylaminoacyl-peptidases	E	conserved hypothetical protein	 0.000000e+00	 0	2.587923e-04	 1.976580e-03	 4.015689e-02	 1.170379e-01	2.929010e-02	0	 0	 2	FALSE	FALSE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5215141	0.6334684	N	0.5492530	0.6245624
13773	129	184515	184516	1	  73	Divergent	-	+	 0.000000	0	  0.000000	 -0.05918887	1.414256	3.173078	1.0830479	1506	Dipeptidyl aminopeptidases/acylaminoacyl-peptidases	E	conserved hypothetical protein	1.376129	3.007808	1.0297151	1938	Archaeal enzymes of ATP-grasp superfamily	R	conserved hypothetical protein	 1.349135e-02	 2	1.453686e-03	 2.795087e-03	 6.430182e-02	 1.658208e-01	1.251737e-01		 2	 8	 TRUE	FALSE	106	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6838149	0.6281588	0.5369217	0.5995746	U	0.4686274	0.5589164
13773	129	184516	184517	1	  36	Same	+	+	 0.000000	0	  0.000000	 -0.69470386	1.376129	3.007808	1.0297151	1938	Archaeal enzymes of ATP-grasp superfamily	R	conserved hypothetical protein	1.406676	3.038932	1.0053241	94	Ribosomal protein L5	J	ribosomal protein L5	 2.254926e-01	 8	9.331671e-04	 3.365548e-03	 5.078096e-02	 2.129939e-01	7.718418e-02		 8	13	FALSE	FALSE	107	 TRUE	0.4469764	0.2259572	0.5480306	0.4469764	0.7652913	1.1551773	0.5544965	0.6158124	U	0.4686274	0.5337621
13773	129	184517	184518	1	 123	Same	+	+	 0.000000	0	  0.000000	 -0.33826347	1.406676	3.038932	1.0053241	94	Ribosomal protein L5	J	ribosomal protein L5	1.426197	3.129232	1.0852889	622	Predicted phosphoesterase	R	conserved hypothetical protein	 6.991221e-02	 5	3.810515e-04	 1.126671e-03	 3.044531e-02	 5.502562e-02	3.336300e-02		13	 5	FALSE	FALSE	108	 TRUE	0.4469764	0.2498620	0.5480306	0.4469764	0.7448207	0.9146962	0.5187390	0.6308211	U	0.4686274	0.5413334
13773	129	184518	184519	1	  -3	Same	+	+	 0.000000	0	  0.000000	 -0.11778304	1.426197	3.129232	1.0852889	622	Predicted phosphoesterase	R	conserved hypothetical protein	1.378533	3.138204	1.1046136	144	tRNA and rRNA cytosine-C5-methylases	J	sun family protein	 5.190299e-03	 5	2.271815e-03	 1.835760e-03	 5.407073e-02	 9.540237e-02	1.886879e-01		 5	 6	FALSE	FALSE	109	 TRUE	0.4469764	0.2945188	0.5480306	0.4469764	0.7448207	0.5453500	0.5180357	0.5831776	U	0.4686274	0.5554237
13773	129	184519	184520	1	 -10	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.378533	3.138204	1.1046136	144	tRNA and rRNA cytosine-C5-methylases	J	sun family protein	1.474857	3.344690	1.1353321	2407	L-fucose isomerase and related proteins	G	conserved hypothetical protein	 1.150801e-03	 1	9.278219e-03	-1.709578e-03	-1.133401e-02	-1.866965e-01	8.256853e-01	0	 6	 1	FALSE	FALSE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4759583	0.4683225	0.4524920	N	0.5492530	0.6245624
13773	129	184520	184521	1	  24	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.474857	3.344690	1.1353321	2407	L-fucose isomerase and related proteins	G	conserved hypothetical protein	1.425384	3.246338	1.1056420	2848	Uncharacterized conserved protein	S	conserved hypothetical protein	 3.554731e-03	 1	2.447569e-03	-6.102733e-04	 1.392193e-02	-5.299772e-02	2.330303e-01		 1	17	 TRUE	FALSE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5281729	0.5058529	0.5695312	U	0.4686274	0.6162291
13773	129	184521	184522	1	  -3	Same	-	-	15.650017	0	 21.012873	 20.87707162	1.425384	3.246338	1.1056420	2848	Uncharacterized conserved protein	S	conserved hypothetical protein	1.475027	3.176755	1.0625881	3830	ACT domain-containing protein	T	conserved hypothetical protein	 2.403925e-01	10	2.464403e-03	-6.146907e-04	 1.325114e-02	-5.351603e-02	2.360036e-01		17	10	 TRUE	FALSE	108	 TRUE	2.5534540	1.9236061	0.5480306	2.5676904	0.7739415	1.1774989	0.5057097	0.5682360	U	0.4686274	0.8846376
13773	129	184522	184523	1	 117	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.475027	3.176755	1.0625881	3830	ACT domain-containing protein	T	conserved hypothetical protein	1.342068	2.927488	1.0220040	372	Citrate synthase	C	citrate synthase part 1, authentic frameshift	 1.976326e-03	 1	1.767811e-02	-2.583779e-03	 1.946115e-02	-2.602825e-01	1.295369e+00	0	10	 1	 TRUE	FALSE	107	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4947521	0.4500198	0.4241419	N	0.5492530	0.6245624
13773	129	184523	184524	1	   4	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.342068	2.927488	1.0220040	372	Citrate synthase	C	citrate synthase part 1, authentic frameshift	1.503617	3.355323	1.0537090	372	Citrate synthase	C	citrate synthase part 2, authentic frameshift	 0.000000e+00	 0	2.609824e-02	-5.709432e-03	-6.944458e-02	-4.342243e-01	1.822396e+00	C	 1	 0	FALSE	FALSE	108	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4139339	0.4104279	Y	1.4497162	0.7118045
13773	129	184524	184525	1	  39	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.503617	3.355323	1.0537090	372	Citrate synthase	C	citrate synthase part 2, authentic frameshift	1.376409	3.021553	1.0662256	2086	Electron transfer flavoprotein, beta subunit	C	electron transfer flavoprotein beta subunit (etfB)	 0.000000e+00	 0	1.618204e-02	-3.916006e-03	-1.769678e-02	-3.270886e-01	1.316417e+00	C	 0	29	FALSE	FALSE	109	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4341659	0.4235217	Y	1.4497162	0.7118045
13773	129	184525	184526	1	  -3	Same	+	+	15.774708	0	 41.993208	 41.53995251	1.376409	3.021553	1.0662256	2086	Electron transfer flavoprotein, beta subunit	C	electron transfer flavoprotein beta subunit (etfB)	1.428817	3.143251	1.1100092	2025	Electron transfer flavoprotein, alpha subunit	C	electron transfer flavoprotein alpha subunit (etfA)	 1.274150e-01	 9	2.746640e-03	 1.692843e-03	 2.754643e-02	 8.070401e-02	2.382459e-01	C	29	 9	FALSE	FALSE	110	 TRUE	2.5365491	2.0259856	0.5480306	2.2310927	0.7702221	1.0640698	0.5177494	0.5674779	Y	1.4497162	0.9308764
13773	129	184526	184527	1	 -35	Convergent	+	-	 0.000000	0	  0.000000	 -0.05918887	1.428817	3.143251	1.1100092	2025	Electron transfer flavoprotein, alpha subunit	C	electron transfer flavoprotein alpha subunit (etfA)	1.468869	3.320599	1.1074680	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	 2.915931e-02	 1	1.604174e-03	-3.945416e-04	 1.560589e-02	-3.364336e-02	1.508038e-01		 9	 1	FALSE	FALSE	111	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6329203	0.7296993	0.5109506	0.5929737	U	0.4686274	0.5589164
13773	129	184527	184528	1	 467	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.468869	3.320599	1.1074680	517	FOG: CBS domain	R	conserved protein with 2 CBS domains	1.415150	3.004746	1.0387009	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase, degenerate	 0.000000e+00	 0	2.885685e-03	-6.333788e-04	 1.589211e-02	-6.708882e-02	2.683606e-01		 1	 0	 TRUE	FALSE	110	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5017564	0.5545399	U	0.4686274	0.6162291
13773	129	184528	184529	1	 560	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.415150	3.004746	1.0387009	365	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	I	acetyl-coenzyme A synthetase, degenerate	1.338202	2.953281	1.0275008	638	20S proteasome, alpha and beta subunits	O	proteasome, beta subunit	 0.000000e+00	 0	5.921128e-03	 4.102320e-03	 9.790434e-02	 2.194363e-01	3.402032e-01	0	 0	 6	FALSE	FALSE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5567743	0.5276748	N	0.5492530	0.6245624
13773	129	184529	184530	1	  65	Divergent	-	+	 2.079442	0	  2.079442	  1.64793625	1.338202	2.953281	1.0275008	638	20S proteasome, alpha and beta subunits	O	proteasome, beta subunit	1.486852	3.271848	1.1315749	430	RNA 3'-terminal phosphate cyclase	A	RNA 3'-terminal phosphate cyclase	 7.884570e-02	 6	2.209682e-02	-4.013621e-03	-5.553455e-02	-3.579596e-01	1.607427e+00	0	 6	16	 TRUE	FALSE	110	FALSE	2.9335626	1.6455924	0.5480306	2.9479804	0.7537284	0.9502693	0.4268096	0.4145245	N	0.5492530	0.8417274
13773	129	184530	184531	1	 -12	Convergent	+	-	 0.000000	0	  0.000000	 -0.07232066	1.486852	3.271848	1.1315749	430	RNA 3'-terminal phosphate cyclase	A	RNA 3'-terminal phosphate cyclase	1.439181	3.444269	1.1442782	109	Polyprenyltransferase (cytochrome oxidase assembly factor)	O	cytochrome C oxidase assembly factor	 2.103529e-02	 1	2.272444e-03	-4.330012e-04	 1.286062e-02	-7.165706e-03	1.947363e-01	0	16	 1	FALSE	FALSE	111	FALSE	0.4469764	0.3007156	0.5480306	0.4469764	0.6329203	0.6838321	0.5193588	0.5814495	N	0.5492530	0.5660839
13773	129	184531	184532	1	  13	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.439181	3.444269	1.1442782	109	Polyprenyltransferase (cytochrome oxidase assembly factor)	O	cytochrome C oxidase assembly factor	1.427156	3.150273	1.0363125	-	-	-	nitrite reductase (cytochrome C), conjectural	 0.000000e+00	 0	1.446105e-04	 2.959655e-04	 2.531128e-02	 2.513828e-03	1.742481e-02		 1	 0	 TRUE	FALSE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5197819	0.6390912	U	0.4686274	0.6162291
13773	129	184532	184533	1	  86	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.427156	3.150273	1.0363125	-	-	-	nitrite reductase (cytochrome C), conjectural	1.381017	2.949200	1.0308698	-	-	-	nitrite reductase (cytochrome d1), conjectural	 0.000000e+00	 0	2.128803e-03	 1.705684e-03	 5.176681e-02	 8.581295e-02	1.827349e-01		 0	 0	 TRUE	FALSE	109	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176850	0.5844907	U	0.4686274	0.6162291
13773	129	184533	184534	1	 -27	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.381017	2.949200	1.0308698	-	-	-	nitrite reductase (cytochrome d1), conjectural	1.407533	3.008375	0.9993664	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase	 0.000000e+00	 0	7.030976e-04	 3.086666e-03	 4.913550e-02	 1.919733e-01	5.918746e-02		 0	 0	FALSE	FALSE	110	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5467859	0.6207976	U	0.4686274	0.6162291
13773	129	184534	184535	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.407533	3.008375	0.9993664	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase	1.382227	3.384744	1.1815464	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	6.404222e-04	 3.033621e-03	 6.347140e-02	 1.894171e-01	5.551213e-02		 0	 2	FALSE	FALSE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5460088	0.6218902	U	0.4686274	0.6162291
13773	129	184535	184536	1	 348	Divergent	-	+	 0.000000	0	  0.000000	 -0.05918887	1.382227	3.384744	1.1815464	-	-	-	conserved hypothetical protein	1.351086	3.161901	1.1326976	3256	Nitric oxide reductase large subunit	P	nitric oxide reductase, cytochrome b subunit	 2.742453e-02	 2	9.697233e-04	 6.937849e-03	 1.152591e-01	 4.377542e-01	4.043093e-02		 2	 3	 TRUE	FALSE	110	FALSE	0.4469764	0.3056289	0.5480306	0.4469764	0.6838149	0.7234251	0.6504905	0.6278164	U	0.4686274	0.5589164
13773	129	184536	184537	1	  78	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.351086	3.161901	1.1326976	3256	Nitric oxide reductase large subunit	P	nitric oxide reductase, cytochrome b subunit	1.419508	3.261342	1.0582067	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	4.681527e-03	 3.198283e-03	 3.516361e-02	 1.725023e-01	2.977490e-01		 3	 0	FALSE	FALSE	111	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5387533	0.5430248	U	0.4686274	0.6162291
13773	129	184537	184538	1	  -8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.419508	3.261342	1.0582067	-	-	-	conserved within P. aerophilum	1.517095	3.475052	1.1045076	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	9.523293e-03	-2.094921e-03	 4.624022e-03	-1.353533e-01	6.857314e-01		 0	 0	FALSE	FALSE	112	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4806413	0.4659563	U	0.4686274	0.6162291
13773	129	184538	184539	1	 228	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.517095	3.475052	1.1045076	-	-	-	conserved within P. aerophilum	1.429158	3.599879	1.1942794	-	-	-	hypothetical protein	 0.000000e+00	 0	7.732866e-03	-1.460851e-03	-6.050079e-03	-7.602033e-02	5.326871e-01		 0	 0	 TRUE	FALSE	111	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4993068	0.4869405	U	0.4686274	0.6162291
13773	129	184539	184540	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.429158	3.599879	1.1942794	-	-	-	hypothetical protein	1.368575	3.271456	1.1471130	-	-	-	hypothetical protein	 0.000000e+00	 0	3.670358e-03	 1.841405e-03	 5.843044e-02	 8.452070e-02	2.977490e-01		 0	 0	FALSE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5176827	0.5430248	U	0.4686274	0.6162291
13773	129	184540	184541	1	 -13	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.368575	3.271456	1.1471130	-	-	-	hypothetical protein	1.341439	3.132363	1.0396010	-	-	-	hypothetical protein	 0.000000e+00	 0	7.363754e-04	 9.106164e-03	 1.404940e-01	 5.545382e-01	2.379596e-02		 0	 0	FALSE	FALSE	113	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7008242	0.6358881	U	0.4686274	0.6162291
13773	129	184541	184542	1	  47	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.341439	3.132363	1.0396010	-	-	-	hypothetical protein	1.363857	2.918746	1.0022815	2180	Nitrate reductase delta subunit	C	nitrate reductase delta subunit (narJ)	 0.000000e+00	 0	5.025842e-04	 9.624911e-03	 1.220314e-01	 5.798886e-01	1.526732e-02		 0	 5	 TRUE	FALSE	112	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7127765	0.6402042	U	0.4686274	0.6162291
13773	129	184542	184543	1	  94	Divergent	-	+	 7.557647	0	  9.429449	  9.42944913	1.363857	2.918746	1.0022815	2180	Nitrate reductase delta subunit	C	nitrate reductase delta subunit (narJ)	1.367286	2.963719	1.0666261	5013	Nitrate reductase alpha subunit	C	nitrate reductase alpha subunit (narG)	 6.125049e-02	 5	1.175426e-05	 7.362389e-03	 1.053264e-01	 4.785697e-01	4.293769e-04	C	 5	15	 TRUE	FALSE	111	FALSE	2.7298057	1.8312372	0.5480306	2.7751372	0.7448207	0.8869692	0.6662116	0.6535639	Y	1.4497162	0.9111808
13773	129	184543	184544	1	  -3	Same	+	+	20.570195	0	 38.476908	 37.38124228	1.367286	2.963719	1.0666261	5013	Nitrate reductase alpha subunit	C	nitrate reductase alpha subunit (narG)	1.302444	2.756448	0.9728836	1140	Nitrate reductase beta subunit	C	nitrate reductase beta subunit (narH)	 5.041264e-01	15	4.204415e-03	 1.252767e-02	 2.055910e-01	 6.422772e-01	6.808775e-02	C	15	15	FALSE	FALSE	112	 TRUE	2.3521781	2.0064833	0.5480306	2.3003231	0.7783720	1.2594416	0.7344407	0.6184259	Y	1.4497162	0.9307483
13773	129	184544	184545	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.302444	2.756448	0.9728836	1140	Nitrate reductase beta subunit	C	nitrate reductase beta subunit (narH)	1.380541	3.222411	1.1087109	-	-	-	nitrate reductase subunit, conjectural	 0.000000e+00	 0	6.099080e-03	 1.055333e-02	 1.005378e-01	 5.460803e-01	1.317751e-01		15	 0	FALSE	FALSE	113	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6965473	0.5979687	U	0.4686274	0.6162291
13773	129	184545	184546	1	   1	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.380541	3.222411	1.1087109	-	-	-	nitrate reductase subunit, conjectural	1.393842	3.552060	1.1892221	-	-	-	hypothetical protein	 0.000000e+00	 0	1.769233e-04	 4.077601e-03	 6.407687e-02	 2.717061e-01	1.221339e-02		 0	 0	FALSE	FALSE	114	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5806704	0.6419378	U	0.4686274	0.6162291
13773	129	184546	184547	1	 -28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.393842	3.552060	1.1892221	-	-	-	hypothetical protein	1.527761	3.231628	1.0895260	-	-	-	hypothetical protein	 0.000000e+00	 0	1.793426e-02	-4.395045e-03	-2.425092e-02	-3.120121e-01	1.286649e+00		 0	 0	FALSE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4366595	0.4247709	U	0.4686274	0.6162291
13773	129	184547	184548	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.527761	3.231628	1.0895260	-	-	-	hypothetical protein	1.382575	3.475554	1.1802312	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	2.107885e-02	-5.255459e-03	-4.349446e-02	-3.758444e-01	1.513485e+00		 0	 0	FALSE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4237249	0.4167886	U	0.4686274	0.6162291
13773	129	184548	184549	1	  41	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.382575	3.475554	1.1802312	-	-	-	conserved hypothetical protein	1.342001	3.500039	1.1140560	-	-	-	hypothetical protein	 0.000000e+00	 0	1.646260e-03	 7.528068e-03	 1.271204e-01	 4.642784e-01	6.609990e-02		 0	 0	FALSE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6617641	0.6187763	U	0.4686274	0.6162291
13773	129	184549	184550	1	 -15	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.342001	3.500039	1.1140560	-	-	-	hypothetical protein	1.351213	3.029104	1.0298120	1131	ABC-type multidrug transport system, ATPase component	V	nitrate ABC transport, ATP-binding protein, putative	 0.000000e+00	 0	8.485724e-05	 1.095885e-02	 1.439690e-01	 6.320746e-01	2.804202e-03		 0	 0	 TRUE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7301852	0.6488220	U	0.4686274	0.6162291
13773	129	184550	184551	1	  77	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.351213	3.029104	1.0298120	1131	ABC-type multidrug transport system, ATPase component	V	nitrate ABC transport, ATP-binding protein, putative	1.408065	3.502279	1.1814281	755	ABC-type transport system involved in cytochrome c biogenesis, permease component	O	transport protein, putative	 0.000000e+00	 0	3.232100e-03	 4.340627e-03	 5.077051e-02	 2.531840e-01	1.933839e-01	0	 0	 1	 TRUE	FALSE	115	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5705576	0.5820196	N	0.5492530	0.6245624
13773	129	184551	184552	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.408065	3.502279	1.1814281	755	ABC-type transport system involved in cytochrome c biogenesis, permease component	O	transport protein, putative	1.391696	3.173105	1.0927777	-	-	-	hypothetical protein	 0.000000e+00	 0	2.679243e-04	 2.586559e-03	 5.526297e-02	 1.604509e-01	2.499457e-02		 1	 0	FALSE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5349843	0.6354254	U	0.4686274	0.6162291
13773	129	184552	184553	1	 -28	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.391696	3.173105	1.0927777	-	-	-	hypothetical protein	1.406147	3.360510	1.1646216	1138	Cytochrome c biogenesis factor	O	cytochrome C-type biogenesis protein, probable	 0.000000e+00	 0	2.088302e-04	 2.701024e-03	 4.846760e-02	 1.705492e-01	1.887197e-02		 0	 0	FALSE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5384693	0.6382319	U	0.4686274	0.6162291
13773	129	184553	184554	1	 -10	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.406147	3.360510	1.1646216	1138	Cytochrome c biogenesis factor	O	cytochrome C-type biogenesis protein, probable	1.435766	3.479461	1.1602454	-	-	-	hypothetical protein	 0.000000e+00	 0	8.772953e-04	 7.070370e-04	 2.442586e-02	 1.906928e-02	8.730370e-02		 0	 0	FALSE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177236	0.6120657	U	0.4686274	0.6162291
13773	129	184554	184555	1	   8	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.435766	3.479461	1.1602454	-	-	-	hypothetical protein	1.406798	3.108210	1.0845349	1084	Predicted GTPase	R	conserved hypothetical protein	 0.000000e+00	 0	8.391660e-04	 6.968671e-04	 3.331588e-02	 1.860928e-02	8.238618e-02		 0	11	FALSE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177547	0.6134641	U	0.4686274	0.6162291
13773	129	184555	184556	1	  44	Divergent	-	+	 0.000000	0	  0.000000	 -0.73334268	1.406798	3.108210	1.0845349	1084	Predicted GTPase	R	conserved hypothetical protein	1.402749	3.057254	1.0350883	1912	Uncharacterized conserved protein	S	conserved hypothetical protein	 9.830162e-02	11	1.639140e-05	 2.169258e-03	 4.705990e-02	 1.339344e-01	2.565660e-03		11	23	 TRUE	FALSE	118	FALSE	0.4469764	0.2222217	0.5480306	0.4469764	0.7764261	1.0073433	0.5256716	0.6491703	U	0.4686274	0.5325774
13773	129	184556	184557	1	 242	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.402749	3.057254	1.0350883	1912	Uncharacterized conserved protein	S	conserved hypothetical protein	1.397873	3.039383	1.1213859	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.378006e-05	 2.603408e-03	 5.244264e-02	 1.727603e-01	2.337719e-03		23	 0	FALSE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5390382	0.6495982	U	0.4686274	0.6162291
13773	129	184557	184558	1	 395	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.397873	3.039383	1.1213859	-	-	-	conserved within P. aerophilum	1.460351	3.328908	1.1359643	-	-	-	hypothetical protein	 0.000000e+00	 0	3.903554e-03	-4.794522e-04	 8.061439e-03	-8.113987e-02	3.902653e-01		 0	 0	FALSE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4975824	0.5139757	U	0.4686274	0.6162291
13773	129	184558	184559	1	  56	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.460351	3.328908	1.1359643	-	-	-	hypothetical protein	1.431160	3.103774	1.0786838	451	Nucleoside-diphosphate-sugar epimerases	MG	NAD dependent epimerase/dehydratase, putative	 0.000000e+00	 0	8.521509e-04	-1.812569e-04	 1.945422e-02	-1.851798e-02	8.106978e-02		 0	 4	 TRUE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5159078	0.6140495	U	0.4686274	0.6162291
13773	129	184559	184560	1	   2	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.431160	3.103774	1.0786838	451	Nucleoside-diphosphate-sugar epimerases	MG	NAD dependent epimerase/dehydratase, putative	1.590364	3.378452	1.0663066	-	-	-	hypothetical protein	 0.000000e+00	 0	2.534605e-02	-2.811840e-03	 3.586673e-02	-8.541420e-02	9.027187e-01		 4	 0	FALSE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4965355	0.4462560	U	0.4686274	0.6162291
13773	129	184560	184561	1	 826	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.590364	3.378452	1.0663066	-	-	-	hypothetical protein	1.524147	3.341751	1.0449936	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	4.384723e-03	 1.011070e-02	 1.033513e-01	 5.450860e-01	4.325634e-02		 0	 0	 TRUE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6953909	0.6266433	U	0.4686274	0.6162291
13773	129	184561	184562	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.524147	3.341751	1.0449936	-	-	-	conserved within P. aerophilum	1.302660	2.845572	0.9458087	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	4.905642e-02	-1.082090e-02	-6.304760e-02	-6.036816e-01	2.504312e+00		 0	 1	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.3935827	0.4032760	U	0.4686274	0.6162291
13773	129	184562	184563	1	 168	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.302660	2.845572	0.9458087	-	-	-	conserved hypothetical protein	1.439101	3.404296	1.1459721	428	Predicted divalent heavy-metal cations transporter	P	conserved protein (gufA)	 3.084637e-03	 1	1.861629e-02	 1.828136e-03	-1.368127e-02	 2.021900e-02	8.453271e-01		 1	15	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.5159347	0.5176507	0.4510979	U	0.4686274	0.6162291
13773	129	184563	184564	1	  56	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.439101	3.404296	1.1459721	428	Predicted divalent heavy-metal cations transporter	P	conserved protein (gufA)	1.338231	2.895938	1.0251045	4260	Putative virion core protein (lumpy skin disease virus)	S	conserved hypothetical protein	 0.000000e+00	 0	1.017475e-02	 1.390912e-03	 6.913663e-02	 1.810804e-02	6.743397e-01		15	 0	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5178031	0.4676734	U	0.4686274	0.6162291
13773	129	184564	184565	1	  -3	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.338231	2.895938	1.0251045	4260	Putative virion core protein (lumpy skin disease virus)	S	conserved hypothetical protein	1.477287	3.566472	1.1692515	-	-	-	hypothetical protein	 0.000000e+00	 0	1.933652e-02	-2.930250e-03	-4.434049e-02	-2.845550e-01	1.393233e+00		 0	 0	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4441865	0.4200228	U	0.4686274	0.6162291
13773	129	184565	184566	1	  30	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.477287	3.566472	1.1692515	-	-	-	hypothetical protein	1.432525	3.229886	1.1116915	4034	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	 0.000000e+00	 0	2.003671e-03	-4.885750e-04	 1.422640e-02	-2.772986e-02	1.762324e-01		 0	 3	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5127991	0.5859323	U	0.4686274	0.6162291
13773	129	184566	184567	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.432525	3.229886	1.1116915	4034	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein	1.425448	3.282526	1.1133052	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	5.008400e-05	 4.895283e-04	 2.726677e-02	 1.380191e-02	7.388346e-03		 3	 0	FALSE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5182969	0.6442479	U	0.4686274	0.6162291
13773	129	184567	184568	1	  30	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.425448	3.282526	1.1133052	-	-	-	conserved within P. aerophilum	1.411126	3.166432	1.0615318	-	-	-	hypothetical protein	 0.000000e+00	 0	2.051289e-04	 1.044733e-03	 3.536125e-02	 5.095096e-02	1.824469e-02		 0	 0	 TRUE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5187859	0.6385209	U	0.4686274	0.6162291
13773	129	184568	184569	1	  -3	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.411126	3.166432	1.0615318	-	-	-	hypothetical protein	1.346232	3.072643	1.0936055	-	-	-	hypothetical protein	 0.000000e+00	 0	4.211197e-03	 4.234548e-03	 9.421554e-02	 2.435875e-01	2.503839e-01		 0	 0	 TRUE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5668294	0.5623731	U	0.4686274	0.6162291
13773	129	184569	184570	1	 152	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.346232	3.072643	1.0936055	-	-	-	hypothetical protein	1.357142	2.963165	1.0195334	436	Aspartate/tyrosine/aromatic aminotransferase	E	aminotransferase, putative	 0.000000e+00	 0	1.190209e-04	 9.911567e-03	 1.311017e-01	 5.932434e-01	4.255485e-03		 0	 1	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.7176720	0.6470653	U	0.4686274	0.6162291
13773	129	184570	184571	1	 -46	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.357142	2.963165	1.0195334	436	Aspartate/tyrosine/aromatic aminotransferase	E	aminotransferase, putative	1.400190	3.066281	1.0481942	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein	 1.352502e-03	 1	1.853156e-03	 4.825956e-03	 6.126282e-02	 3.105037e-01	1.009513e-01	0	 1	 7	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4789292	0.5964094	0.6063831	N	0.5492530	0.6245624
13773	129	184571	184572	1	  47	Divergent	-	+	 0.000000	0	  0.000000	 -0.43619026	1.400190	3.066281	1.0481942	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein	1.321950	2.965937	1.0230379	1859	RNA:NAD 2'-phosphotransferase	J	conserved hypothetical protein	 4.296112e-02	 7	6.121415e-03	 6.627851e-03	 1.341248e-01	 3.747347e-01	2.213258e-01	0	 7	13	 TRUE	FALSE	120	FALSE	0.4469764	0.2379634	0.5480306	0.4469764	0.7596462	0.8195450	0.6229790	0.5739549	N	0.5492530	0.5463508
13773	129	184572	184573	1	 271	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.321950	2.965937	1.0230379	1859	RNA:NAD 2'-phosphotransferase	J	conserved hypothetical protein	1.415921	3.381080	1.1490684	2512	Uncharacterized membrane-associated protein/domain	S	conserved protein	 0.000000e+00	 0	8.830438e-03	 4.591598e-03	 3.506893e-02	 2.270291e-01	4.047811e-01		13	 0	FALSE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5604170	0.5116279	U	0.4686274	0.6162291
13773	129	184573	184574	1	 509	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.415921	3.381080	1.1490684	2512	Uncharacterized membrane-associated protein/domain	S	conserved protein	1.466509	3.261957	1.0882277	-	-	-	paREP8	 0.000000e+00	 0	2.559142e-03	-5.361913e-04	 1.185325e-02	-5.964157e-02	2.389957e-01		 0	 0	FALSE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5038693	0.5668045	U	0.4686274	0.6162291
13773	129	184574	184575	1	 376	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.466509	3.261957	1.0882277	-	-	-	paREP8	1.370817	2.914182	1.0373655	620	Methionine synthase II (cobalamin-independent)	E	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	 0.000000e+00	 0	9.156949e-03	-1.217977e-03	 2.240429e-02	-1.537747e-01	7.939179e-01		 0	15	FALSE	FALSE	123	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4757557	0.4559908	U	0.4686274	0.6162291
13773	129	184575	184576	1	  58	Divergent	-	+	 0.000000	0	  0.000000	 -0.35640459	1.370817	2.914182	1.0373655	620	Methionine synthase II (cobalamin-independent)	E	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	1.386139	3.002407	1.0392579	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	-3.231128e-02	15	2.347793e-04	 5.257878e-03	 7.653980e-02	 3.539338e-01	1.396859e-02	0	15	21	 TRUE	FALSE	122	FALSE	0.4469764	0.2470818	0.5480306	0.4469764	0.7783720	0.5246599	0.6142207	0.6410384	N	0.5492530	0.5492288
13773	129	184576	184577	1	  36	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.386139	3.002407	1.0392579	183	Acetyl-CoA acetyltransferase	I	acetyl-CoA C-acyltransferase	1.366183	3.068641	1.0971303	1840	ABC-type Fe3+ transport system, periplasmic component	P	conserved protein	 0.000000e+00	 0	3.982391e-04	 5.560225e-03	 9.337461e-02	 3.704728e-01	2.216739e-02	0	21	 0	FALSE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6201159	0.6366745	N	0.5492530	0.6245624
13773	129	184577	184578	1	  -3	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.366183	3.068641	1.0971303	1840	ABC-type Fe3+ transport system, periplasmic component	P	conserved protein	1.477375	3.233519	1.1193939	-	-	-	paREP8	 0.000000e+00	 0	1.236362e-02	-2.213939e-03	-2.187245e-02	-2.343161e-01	1.057598e+00		 0	 0	FALSE	FALSE	124	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4558376	0.4354257	U	0.4686274	0.6162291
13773	129	184578	184579	1	  44	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.477375	3.233519	1.1193939	-	-	-	paREP8	1.500733	3.370857	1.0556176	3432	Predicted transcriptional regulator	K	conserved hypothetical protein	 0.000000e+00	 0	5.455865e-04	 1.281969e-03	 4.019476e-02	 1.741680e-01	2.902800e-02		 0	 2	 TRUE	FALSE	123	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5398979	0.6335997	U	0.4686274	0.6162291
13773	129	184579	184580	1	 -22	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.500733	3.370857	1.0556176	3432	Predicted transcriptional regulator	K	conserved hypothetical protein	1.352233	3.417203	1.1547983	-	-	-	hypothetical protein	 0.000000e+00	 0	2.205214e-02	-4.892540e-03	-1.767955e-02	-3.914857e-01	1.630864e+00		 2	 0	 TRUE	FALSE	122	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4212174	0.4139045	U	0.4686274	0.6162291
13773	129	184580	184581	1	   1	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.352233	3.417203	1.1547983	-	-	-	hypothetical protein	1.392454	3.337052	1.1768822	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	 0.000000e+00	 0	1.617703e-03	 5.844348e-03	 7.292316e-02	 3.679731e-01	8.150740e-02		 0	10	 TRUE	FALSE	121	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6186980	0.6138313	U	0.4686274	0.6162291
13773	129	184581	184582	1	  82	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.392454	3.337052	1.1768822	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	1.400797	3.308903	1.1551574	-	-	-	conserved hypothetical protein	 0.000000e+00	 0	6.961064e-05	 2.982044e-03	 5.328378e-02	 1.972601e-01	4.877463e-03		10	 0	 TRUE	FALSE	120	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5490032	0.6464448	U	0.4686274	0.6162291
13773	129	184582	184583	1	 -28	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.400797	3.308903	1.1551574	-	-	-	conserved hypothetical protein	1.351875	2.877678	1.0198789	-	-	-	conserved within P. aerophilum	 0.000000e+00	 0	2.393412e-03	 5.035171e-03	 9.826031e-02	 3.147969e-01	1.268081e-01		 0	 0	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5974325	0.5988589	U	0.4686274	0.6162291
13773	129	184583	184584	1	 140	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.351875	2.877678	1.0198789	-	-	-	conserved within P. aerophilum	1.457726	3.629367	1.1969932	-	-	-	hypothetical protein	 0.000000e+00	 0	1.120449e-02	-6.302682e-04	-1.168063e-02	-1.165043e-01	8.439165e-01		 0	 0	 TRUE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4861632	0.4512878	U	0.4686274	0.6162291
13773	129	184584	184585	1	 394	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.457726	3.629367	1.1969932	-	-	-	hypothetical protein	1.380575	3.299493	1.1281623	-	-	-	hypothetical protein	 0.000000e+00	 0	5.952342e-03	-4.485062e-04	 2.812797e-02	-8.793215e-02	5.338080e-01		 0	 0	 TRUE	FALSE	119	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4960471	0.4864093	U	0.4686274	0.6162291
13773	129	184585	184586	1	  -7	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.380575	3.299493	1.1281623	-	-	-	hypothetical protein	1.412168	3.003666	1.0370690	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme homolog	 0.000000e+00	 0	9.981239e-04	 2.777853e-03	 4.438825e-02	 1.687587e-01	8.238618e-02		 0	 1	FALSE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5383276	0.6134641	U	0.4686274	0.6162291
13773	129	184586	184587	1	 692	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.412168	3.003666	1.0370690	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme homolog	1.506469	3.459895	1.1282344	-	-	-	paREP1	 1.851224e-04	 1	8.892751e-03	-2.160373e-03	-7.259780e-04	-1.589107e-01	6.997843e-01		 1	 1	FALSE	FALSE	121	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4421536	0.4744672	0.4649206	U	0.4686274	0.6162291
13773	129	184587	184588	1	 152	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.506469	3.459895	1.1282344	-	-	-	paREP1	1.471631	3.077425	1.1065093	-	-	-	carbonic anhydrase part 2, authentic frameshift	 0.000000e+00	 0	1.213684e-03	 1.114650e-03	 2.710731e-02	 1.534743e-01	6.929460e-02		 1	 0	 TRUE	FALSE	120	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5317337	0.6180080	U	0.4686274	0.6162291
13773	129	184588	184589	1	  34	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.471631	3.077425	1.1065093	-	-	-	carbonic anhydrase part 2, authentic frameshift	1.438484	3.327847	1.1152304	288	Carbonic anhydrase	P	carbonic anhydrase part 1, authentic frameshift	 0.000000e+00	 0	1.098763e-03	-2.612621e-04	 1.706599e-02	-8.646438e-03	9.756633e-02		 0	 0	 TRUE	FALSE	119	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5190341	0.6075710	U	0.4686274	0.6162291
13773	129	184589	184590	1	 363	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.438484	3.327847	1.1152304	288	Carbonic anhydrase	P	carbonic anhydrase part 1, authentic frameshift	1.386091	3.116216	1.1105273	616	Periplasmic serine proteases (ClpP class)	OU	protease IV, conjectural	 0.000000e+00	 0	2.744992e-03	 8.430024e-04	 4.100045e-02	 1.658608e-02	2.596853e-01		 0	 0	 TRUE	FALSE	118	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5180359	0.5580942	U	0.4686274	0.6162291
13773	129	184590	184591	1	  29	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.386091	3.116216	1.1105273	616	Periplasmic serine proteases (ClpP class)	OU	protease IV, conjectural	1.459403	3.174885	1.1130459	2248	Predicted hydrolase (metallo-beta-lactamase superfamily)	R	conserved hypothetical protein	 0.000000e+00	 0	5.374663e-03	-5.230769e-04	 3.955320e-03	-9.495532e-02	5.127131e-01		 0	 8	 TRUE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4936931	0.4912800	U	0.4686274	0.6162291
13773	129	184591	184592	1	   2	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.459403	3.174885	1.1130459	2248	Predicted hydrolase (metallo-beta-lactamase superfamily)	R	conserved hypothetical protein	1.366860	3.290741	1.1518905	-	-	-	hypothetical protein	 0.000000e+00	 0	8.564216e-03	-6.771193e-04	 3.080454e-02	-1.205825e-01	7.427979e-01		 8	 0	 TRUE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4848630	0.4602020	U	0.4686274	0.6162291
13773	129	184592	184593	1	  59	Same	-	-	 0.000000	0	  0.000000	  0.00000000	1.366860	3.290741	1.1518905	-	-	-	hypothetical protein	1.368479	3.332175	1.1423208	3366	Uncharacterized protein conserved in archaea	S	hypothetical protein	 0.000000e+00	 0	2.619817e-06	 7.008991e-03	 1.020005e-01	 4.617940e-01	1.702194e-04		 0	 2	 TRUE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.6607487	0.6547351	U	0.4686274	0.6162291
13773	129	184593	184594	1	  44	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.368479	3.332175	1.1423208	3366	Uncharacterized protein conserved in archaea	S	hypothetical protein	1.404465	3.308175	1.1439954	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	 3.728161e-04	 1	1.295049e-03	 3.890967e-03	 5.436587e-02	 2.484596e-01	9.236375e-02		 2	 1	 TRUE	FALSE	114	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.6329203	0.4500832	0.5690874	0.6101085	U	0.4686274	0.6162291
13773	129	184594	184595	1	  40	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.404465	3.308175	1.1439954	577	ABC-type antimicrobial peptide transport system, permease component	V	conserved hypothetical protein	1.624174	3.668618	1.1384561	-	-	-	hypothetical protein	 0.000000e+00	 0	4.827185e-02	-8.108189e-03	-3.845361e-03	-3.334515e-01	1.619124e+00		 1	 0	FALSE	FALSE	115	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4312286	0.4143169	U	0.4686274	0.6162291
13773	129	184595	184596	1	 340	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.624174	3.668618	1.1384561	-	-	-	hypothetical protein	1.387250	3.161393	1.0880930	1401	GTPase subunit of restriction endonuclease	V	hypothetical protein	 0.000000e+00	 0	5.613275e-02	-1.108261e-02	-1.742077e-01	-4.762603e-01	2.046459e+00		 0	 0	FALSE	FALSE	116	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4088691	0.4077159	U	0.4686274	0.6162291
13773	129	184596	184597	1	  53	Same	+	+	 0.000000	0	  0.000000	  0.00000000	1.387250	3.161393	1.0880930	1401	GTPase subunit of restriction endonuclease	V	hypothetical protein	1.505792	3.341865	1.1461190	-	-	-	hypothetical protein	 0.000000e+00	 0	1.405212e-02	-3.489297e-03	-2.299327e-02	-2.848660e-01	1.139634e+00		 0	 0	FALSE	FALSE	117	 TRUE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.4440093	0.4309702	U	0.4686274	0.6162291
13773	129	184597	184598	1	 -78	Convergent	+	-	 0.000000	0	  0.000000	  0.00000000	1.505792	3.341865	1.1461190	-	-	-	hypothetical protein	1.448396	3.252345	1.0893658	-	-	-	hypothetical protein	 0.000000e+00	 0	3.294303e-03	-1.630287e-04	 1.133924e-02	 3.648938e-02	2.234975e-01		 0	 0	FALSE	FALSE	118	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5177617	0.5730737	U	0.4686274	0.6162291
13773	129	184598	181994	1	 187	Divergent	-	+	 0.000000	0	  0.000000	  0.00000000	1.448396	3.252345	1.0893658	-	-	-	hypothetical protein	1.335192	2.921130	1.0080980	2419	Uncharacterized conserved protein	S	conserved hypothetical protein	 0.000000e+00	 0	1.281514e-02	 3.482425e-04	 5.907673e-02	-5.774030e-02	8.509815e-01		 0	 2	 TRUE	FALSE	117	FALSE	0.4469764	0.4914888	0.5480306	0.4469764	0.5091911	0.5078922	0.5046173	0.4503392	U	0.4686274	0.6162291