==>runtrx start: date:  Mon Feb 16 15:49:55 EST 2009 ( new-transpgrid.pppl.gov )
runtrx: tok.yy = WRK.88
==========(runtrx)======================
date:  Mon Feb 16 15:49:55 EST 2009 ( new-transpgrid.pppl.gov )
args:  37065Y05 pre
==========(runtrx)======================
==========(runtrx)======================
==========TRANSP preprocessing==========
date:  Mon Feb 16 15:49:55 EST 2009 ( new-transpgrid.pppl.gov )
==========check for 37065Y05_mdsmark.sh===
==========(runtrx)======================
==========TRDAT execution===============
date:  Mon Feb 16 15:49:55 EST 2009 ( new-transpgrid.pppl.gov )
  (mpi_share_env) process myid= 0  cwd: /local/pshr0005/transp_compute/WRK/37065Y05
    TRDAT Default  vn 2.01 18-1-2002 
 %TRDAT:  detected ELVIS_SERVER = "/p/transpgrid/qshare/ElVis/".
File /p/transpgrid/qshare/ElVis/ already exists, renamed to /p/transpgrid/qshare/ElVis/~
  CTOKNM : Cdir = /local/pshr0005/transp_compute/WRK/37065Y05/
 % DIRECTORY IS /local/pshr0005/transp_compute/WRK/37065Y05/; TOKAMAK ID SET TO WRK 
  
 namelist elements assigned the same value more than once:
   DLAMDA                                XYBAPA                                
   NLBDAT                                XYBSCA                                
  -----------> entering UF0GET.
 NAMED FILE:  ./37065Y05_tmp/ACS37065.ECF
 % UF0DRD WARNING:  DIMENSIONALITY OF INPUT FILE = 2
 % ECF HARMONIC = 2
 NAMED FILE:  ./37065Y05_tmp/P37065.NB2
 % UF0DRD WARNING:  DIMENSIONALITY OF INPUT FILE = 2
 % NO. OF BEAMS (NB2 DATA) =  7
 NAMED FILE:  ./37065Y05_tmp/M37065.RM0
 % UF0DRD WARNING:  DIMENSIONALITY OF INPUT FILE = 1
 ?UF0DRD-- NO SCALARS IN 0-D FILE-- NO DATA
 ?UF0DRD: data read error.
  %OK: BTOR_CCW not found, using namelist:  nlbccw =  T
  %OK: ITOR_CCW not found, using namelist:  nljccw =  T
  %UF0GET -- finished.
  
  %datchk: reset MRSTRT to  -5
  %datchk: restart records once every  -5  minutes.
  Note: nlfsp_server FALSE => nlfsp_species FALSE.
  Note: nlfsp_server FALSE => nlfsp_psirz FALSE.
 DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC
  %DATCHK: NYXINV incremented to be odd: 101 161
  %DATCHK: no ECH/ECCD, NLECRF=F, nantech=0 set.
  TIDXSW defaulted: value of 0.05 assigned.
 %DATCHK warning:  RFRAC defaulted.
  %DATCHK: NMODEL=2, Const. v & with minimal diffusivity:
   DFIMIN= 0.E+0  cm2/sec.
 %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O
  GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG"
 %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY.
  dummy trdatusub vsn trgdat_check called (OK).
  dummy trdatusub vsn trgdat_psload called (OK).
  *UTRCHK:  CHECKING TRDAT NAMELIST SPECIFICATIONS.

 *DDEFIN:  SET UP PHYSICS DATA FOR ANALYSIS:
  TIME RANGE IS TINIT= 3.0000E+00, FTIME= 4.5000E+00 SECONDS.

 SETSCD - SET SCALAR DATA FOR UPF
 SETTIM - SET UP TIMING INFORMATION FOR UPF

 *UF1GET:  PROCESSING "CUR":  plasma current amps    -------------------
 NAMED FILE:  ./37065Y05_tmp/SM37065.CUR

 *UF1GET:  PROCESSING "RBZ":  [ext. B field] * R Tesla*cm    -----------
 NAMED FILE:  ./37065Y05_tmp/S37065.RBZ

 *UF1GET:  PROCESSING "ALP":  magnetics alpha est.      ----------------
 NAMED FILE:  ./37065Y05_tmp/T37065.ALP

 *UF1GET:  PROCESSING "BDI":  beta diamagnetic      --------------------
 NAMED FILE:  ./37065Y05_tmp/T37065.BDI

 *UF1GET:  PROCESSING "DFL":  diamagnetic flux Webers    ---------------
 NAMED FILE:  ./37065Y05_tmp/T37065.DFL

 *UF1GET:  PROCESSING "EDI":  paramagnetic energy Joules    ------------
 NAMED FILE:  ./37065Y05_tmp/T37065.EDI

 *UF1GET:  PROCESSING "EHP":  E(Bpol)/2+E(plasma) Joules    ------------
 NAMED FILE:  ./37065Y05_tmp/T37065.EHP

 *UF1GET:  PROCESSING "ELI":  e(Li) non-circular Joules    -------------
 NAMED FILE:  ./37065Y05_tmp/T37065.ELI

 *UF1GET:  PROCESSING "GAS":  gas flow source #/sec    -----------------
 NAMED FILE:  ./37065Y05_tmp/W37065.GAS

 *UF1GET:  PROCESSING "L2B":  li/2 + beta(pol)      --------------------
 NAMED FILE:  ./37065Y05_tmp/T37065.L2B

 *UF1GET:  PROCESSING "NTX":  Neutron flux n/sec    --------------------
 NAMED FILE:  ./37065Y05_tmp/W37065.NTX

 *UF1GET:  PROCESSING "RCY":  recycling source #/sec    ----------------
 NAMED FILE:  ./37065Y05_tmp/S37065.RCY

 *UF1GET:  PROCESSING "RTP":  magnetics Rt est. cm    ------------------
 NAMED FILE:  ./37065Y05_tmp/T37065.RTP

 *UF1GET:  PROCESSING "VSB":  Vis. Bremsstrahlung VB units    ----------
 NAMED FILE:  ./37065Y05_tmp/CS37065.VSB

 *UF1GET:  PROCESSING "VSF":  surface voltage volts    -----------------
 NAMED FILE:  ./37065Y05_tmp/T37065.VSF

 *UF1GET:  PROCESSING "RM0":  0th R moment cm    -----------------------
 NAMED FILE:  ./37065Y05_tmp/M37065.RM0

 *UF2GET:  PROCESSING "RMM":  R moments cm    --------------------------
 NAMED FILE:  ./37065Y05_tmp/M37065.RMM

 *UF2GET:  PROCESSING "YMM":  Y moments cm    --------------------------
 NAMED FILE:  ./37065Y05_tmp/M37065.YMM
 Setmom: Interpolate  RM*-YM* bdy moments data for UPF
 %SETMOM:  NMOM =  8

 *UF2GET:  PROCESSING "BOL":  Power radiated W/cm**3    ----------------
 NAMED FILE:  ./37065Y05_tmp/R37065.BOL
 %CKSETRD:  NRIBOL=4 DATA:  PLASMA COVERAGE CHECK:
  GREATEST LOWER BOUND (*) (R-R0)/A =  2.0923E-01
  LEAST UPPER BOUND (*)    (R-R0)/A =  1.4516E+00
 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = 
   2.0000E-01 TO  9.0000E-01 AT ALL TIMES IN THE ANALYSIS.
 *REQUIREMENT RELAXED BY NAMELIST:  XRCBOL= 3.000E-01 RMJCHK= 1.000E+00
 %SETRD0:  X VECTOR SET FROM UFILE MINOR RADIUS DATA

 *UF2GET:  PROCESSING "ECF":  electron temperature eV    ---------------
 NAMED FILE:  ./37065Y05_tmp/ACS37065.ECF
 %SETDAT2-- ECE FREQUENCY DATA (GHZ) PASSED UNCHANGED, NPTS= 16

 *UF2GET:  PROCESSING "NER":  electron density n/cm**3    --------------
 NAMED FILE:  ./37065Y05_tmp/S37065.NER
 %CHKTIM:  DATA TIME RANGE  3.0054E+00 TO  4.9916E+00 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
 %SETRD0:  X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA

 *DDEFIN: Set Plasma Heating parameters :-    ==========================
  
  -> entering setnbi (neutral beam powers, voltages, etc.)
 SETNBI - SET UP NEUTRAL BEAM DATA FOR UPF

 *UF2GET:  PROCESSING "NB2":  beam heating data      -------------------
 NAMED FILE:  ./37065Y05_tmp/P37065.NB2
 %SETNBI- BEAM FULL ENERGY FRACTIONS SET BY NBI FILE **
 %SETNBI- BEAM HALF ENERGY FRACTIONS SET BY NBI FILE **
  %setnbi: NBI on/off times taken from data.
 %NB_ONOFF: NBI on/off times (s):   3.5050E+00  4.5000E+00
  
  -> entering setrfp (ICRF powers)
  (no ICRF power detected)
  
  -> entering setlhp (Lower Hybrid powers)
  (no Lower Hybrid Antenna Powers detected)
  
  -> entering setecp (ECH/ECCD powers)
  (no ECH/ECCD detected)
  
  Non-simple Zeff data:
    Zeff inferred from Vis. Bremsstrahlng data.
 %SETDFLT:  "DTG" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, DTMAXG =  1.0000E-02
  %setmisc -- time dependent geometry timestep enabled (ZOOM is off).
 %SETDFLT:  "DTS" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES =  1.0000E-02
  %setmisc -- time dependent source timestep enabled (ZOOM is off).
 %SETDFLT:  "DTX" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT =  1.0000E-02
  %setmisc -- time dependent output timestep enabled (ZOOM is off).
 %TDB_EXECSYM:  PRESYMMETRIZE THE "NER" DATA
 WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV
 WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV
  --------------------------------------------------
  %trdat_bdy_check -- checking plasma boundary data
  
  trdat_bdy_check: OK
  ...min(r_curvature/(Rmax-Rmin)) is:  0.46761358130091601
  ...at time t= 4.4799999999999685  seconds.
  

 ------------> thermal ion ptcl balance summary:

  Hydrogen  NDEFINE=0 NMODEL=2 RC=NLRCYC GF=NLRCYC           
  Deuterium NDEFINE=0 NMODEL=2 RC=NLRCYC GF=NLRCYC           
  Tritium   (absent)                                         
  Helium-3  (absent)                                         
  Helium-4  (absent)                                         
  Lithium-6 (absent)                                         

 Recycling fractions RFRAC defaulted.

 ------------------------------------
  Fast ion summary:
  
  Beam species: D
  Fusion product species: T, He3
  Minority RF species: (None)
 ------------------------------------
==========(runtrx TRDAT sts = 0)======
==========LABEL execution===============
date:  Mon Feb 16 15:49:56 EST 2009 ( new-transpgrid.pppl.gov )
==>runtrx:  label execution successful
==========(runtrx)======================
==========TRANSP link & load============
==========(runtrx)======================
date:  Mon Feb 16 15:49:57 EST 2009 ( new-transpgrid.pppl.gov )
--> copy_expert_for: standard expert source copied to: 37065Y05ex.for
--> copy_expert_for: up-to-date expert object copied to: 37065Y05ex.o
 **** uplink 37065Y05tr nolib
check_xlibvars: setenv TRLIB_PATH (null)
csh -f /local/pshr0005/transp_compute/WRK/37065Y05/37065Y05tr.mk nolib
make: `/p/transp1/ludesche/path_64/obj/freeshare/port.o' is up to date.
make: `/p/transp1/ludesche/path_64/obj/freeshare/blockd.o' is up to date.
make: `/local/pshr0005/transp_compute/WRK/37065Y05/37065Y05ex.o' is up to date.
make: `/p/transp1/ludesche/path_64/obj/transp/subtransp.o' is up to date.
make: `/p/transp1/ludesche/path_64/obj/freeshare/fspdata.o' is up to date.
csh -f /local/pshr0005/transp_compute/WRK/37065Y05/37065Y05tr.sh
csh/linkload detected:  f90 libraries requirement with C/C++ linkage
==>runtrx:  TRANSP link successful
==========(runtrx)======================
==========>runtrx normal exit<==========
date:  Mon Feb 16 15:50:05 EST 2009 ( new-transpgrid.pppl.gov )