The following is the content of file diam.wi-eqtl.txt

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\# 1129319634 -filetype Eqtl.out

\#

\# QTL Cartographer v. 1.15a, 25 Oct 00

\# This output file (diam.WI-EQTL.txt) was created by Eqtl\...

\#

\# It is 14:53:54 on Friday, 14 October 2005

\#

\#

\# The following is for hypothesis test 10 and Zmapqtl model 6

\#

\# Here is the data on the QTLS\...

\#

-t 14 is the number of traits

\#

\#

-k 0

\# for trait -named Trait-1 which is -number 1

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-2 which is -number 2

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-3 which is -number 3

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-4 which is -number 4

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-5 which is -number 5

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 11

\# for trait -named Trait-6 which is -number 6

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

1 1 16 54.4100 4.8509 -0.3180 0.0000 0.1101 0.7098 0.5435

2 1 18 56.5100 5.6452 -0.3305 0.0000 0.1147 0.7145 0.6940

3 1 25 145.5100 5.0764 -0.3288 0.0000 0.1195 0.6791 0.8015

4 1 28 150.6100 7.2369 -0.3705 0.0000 0.1547 0.7144 0.6927

5 3 16 75.7100 3.9575 0.2740 0.0000 0.0854 0.6956 1.0954

6 3 18 81.4100 5.2287 0.3123 0.0000 0.1103 0.7205 0.6892

7 4 2 21.1100 3.3810 0.3406 0.0000 0.1324 0.7988 0.5017

8 4 3 38.1100 2.8349 0.2402 0.0000 0.0629 0.7293 0.5626

9 6 12 65.6100 3.0980 0.2249 0.0000 0.0583 0.7143 0.6935

10 8 4 19.2100 3.4788 -0.2634 0.0000 0.0770 0.7267 0.6823

11 10 4 35.6100 2.4730 0.2050 0.0000 0.0458 0.7139 0.6846

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-7 which is -number 7

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-8 which is -number 8

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-9 which is -number 9

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-10 which is -number 10

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-11 which is -number 11

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-12 which is -number 12

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-13 which is -number 13

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-14 which is -number 14

\#

\# \# ..Chrom..Markr. .Position. .LOD Score. .Additive. .Dominance. .R2.
.TR2. .S.

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

#End of this block of information

\#

\# The following section is formatted just like an Rqtl.out file.

\# If this is a part of an Eqtl.out file, it is here just in case

\# you want to use it as input for Rcross or Zmapqtl. Otherwise,

\# the information between the start and end tokens is identical to

\# what has been written above. If this is an Rqtl.out file,

\# disregard this note.

\#

\# Below, those lines that start with a minus sign and an l (-l)

\# define loci, while those that start with a minus sign and an i (-i)

\# define epistatic interactions between the loci previously defined.

\# The loci must be defined before the interactions can be defined.

\# For some experimental designs, some interactions will be ignored.

\#

-start model

\#

\# Here is the data on the QTLS\...

\#

-t 14 is the number of traits

\#

\#

-k 0

\# for trait -named Trait-1 which is -number 1

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-2 which is -number 2

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-3 which is -number 3

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-4 which is -number 4

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-5 which is -number 5

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 11

\# for trait -named Trait-6 which is -number 6

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

-l 1 1 16 0.0400 0.0129 -0.3180 0.0000

-l 2 1 18 0.0001 0.0468 -0.3305 0.0000

-l 3 1 25 0.0400 0.0049 -0.3288 0.0000

-l 4 1 28 0.0001 0.0059 -0.3705 0.0000

-l 5 3 16 0.0794 0.0069 0.2740 0.0000

-l 6 3 18 0.0101 0.0159 0.3123 0.0000

-l 7 4 2 0.1814 0.1364 0.3406 0.0000

-l 8 4 3 0.0301 0.0537 0.2402 0.0000

-l 9 6 12 0.0001 0.0059 0.2249 0.0000

-l 10 8 4 0.0301 0.0938 -0.2634 0.0000

-l 11 10 4 0.0001 0.0299 0.2050 0.0000

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-7 which is -number 7

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-8 which is -number 8

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-9 which is -number 9

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-10 which is -number 10

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-11 which is -number 11

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-12 which is -number 12

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-13 which is -number 13

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

-k 0

\# for trait -named Trait-14 which is -number 14

\#

\# \# ..Chrom..Markr. .RecombiL. .RecombiR. .Additive. .Dominance

\#

\# QTL1 QTL2 Type Value

\#

\#

\#

#End of this block of information

\#

-end model

\#