**Table S1**

*Oncomine results based on testing for association of grade with
expression in breast tumors in 15 independent data sets using the set of
genes that were found statistically significant for distinguishing grade
by FEVS and not with no filtering(FEVS-exclusive genes)*

+------+-----+----------+-------+------+----------+---------+--------+
|      |     |          |       | **Nu |          |         |        |
|      |     |          |       | mber |          |         |        |
|      |     |          |       | of   |          |         |        |
|      |     |          |       | data |          |         |        |
|      |     |          |       | sets |          |         |        |
|      |     |          |       | w    |          |         |        |
|      |     |          |       | here |          |         |        |
|      |     |          |       | p-v  |          |         |        |
|      |     |          |       | alue |          |         |        |
|      |     |          |       | is** |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | **W | **Clone  | *     | **P\ | **.0001[ | **      | *      |
|      | ell | ID**     | *Gene | <.00 | \<]{.und | .001[\< | *.01[\ |
|      | I   |          | Sym   | 01** | erline}P | ]{.unde | <]{.un |
|      | D** |          | bol** |      | \<.001** | rline}P | derlin |
|      |     |          |       |      |          | \<.01** | e}P[\< |
|      |     |          |       |      |          |         | ]{.und |
|      |     |          |       |      |          |         | erline |
|      |     |          |       |      |          |         | }.05** |
+------+-----+----------+-------+------+----------+---------+--------+
| **FE | 209 | IMA      | ARG2  | 0    | 1        | 1+1     | 0+1    |
| VS-e | 253 | GE:50480 |       |      |          |         |        |
| xclu |     |          |       |      |          |         |        |
| sive |     |          |       |      |          |         |        |
| g    |     |          |       |      |          |         |        |
| enes |     |          |       |      |          |         |        |
| f    |     |          |       |      |          |         |        |
| ound |     |          |       |      |          |         |        |
| al   |     |          |       |      |          |         |        |
| lowi |     |          |       |      |          |         |        |
| ng** |     |          |       |      |          |         |        |
|      |     |          |       |      |          |         |        |
| **0  |     |          |       |      |          |         |        |
| erro |     |          |       |      |          |         |        |
| rs** |     |          |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 200 | IMAG     | CDC6  | 5    | 1        | 2       | 2      |
|      | 813 | E:204214 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | C     | 5    | 1        | 0       | 1      |
|      | 463 | E:491243 | XCL10 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 28  | IMAG     | GATA3 | 6    | 0        | 1       | 0      |
|      | 964 | E:365681 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | GBP1  | 4    | 0        | 2       | 0      |
|      | 468 | E:502085 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 28  | IMAG     | HDAC2 | 3    | 1        | 2       | 3      |
|      | 381 | E:712866 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 28  | IMAG     | HMGB2 | 4    | 0        | 2       | 0      |
|      | 253 | E:341782 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 200 | IMAG     | LRBA  | 0    | 3        | 2       | 4      |
|      | 712 | E:376516 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | L     | 4    | 3        | 1       | 0      |
|      | 720 | E:759873 | RRC17 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 208 | IMAG     | LYZ   | 0    | 1        | 1       | 1      |
|      | 370 | E:293925 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | MYST3 | 0    | 0        | 1+1     | 1+2    |
|      | 738 | E:949928 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | PCNA  | 3    | 2        | 3       | 5      |
|      | 503 | E:789182 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | TOP2A | 7    | 2        | 1       | 1      |
|      | 384 | E:825470 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | PC:2178  | W     | 5    | 0        | 0       | 4      |
|      | 456 |          | ARS\* |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
| **FE | 28  | IMAG     | AURKB | 6    | 1        | 1       | 2      |
| VS-e | 957 | E:241029 |       |      |          |         |        |
| xclu |     |          |       |      |          |         |        |
| sive |     |          |       |      |          |         |        |
| g    |     |          |       |      |          |         |        |
| enes |     |          |       |      |          |         |        |
| f    |     |          |       |      |          |         |        |
| ound |     |          |       |      |          |         |        |
| al   |     |          |       |      |          |         |        |
| lowi |     |          |       |      |          |         |        |
| ng** |     |          |       |      |          |         |        |
|      |     |          |       |      |          |         |        |
| **10 |     |          |       |      |          |         |        |
| erro |     |          |       |      |          |         |        |
| rs** |     |          |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 209 | IMAG     | B     | 0    | 0        | 3       | 1      |
|      | 232 | E:740801 | CKDHA |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 208 | IMAG     | C10o  | 3    | 2        | 0       | 1      |
|      | 679 | E:740941 | rf116 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 209 | IMAG     | CD83  | 0    | 0        | 0       | 1      |
|      | 214 | E:530185 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | CDK7  | 0    | 0        | 0       | 0+1    |
|      | 774 | E:759172 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | C     | 5    | 1        | 0       | 1      |
|      | 885 | E:967284 | XCL10 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 202 | IMAG     | CXCL9 | 4    | 0        | 0       | 4      |
|      | 229 | E:503617 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 209 | IMAG     | DPP6  | 0    | 0        | 0       | 0      |
|      | 139 | E:361688 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 202 | IMAG     | EDNRA | 0    | 5        | 1       | 2      |
|      | 512 | E:788285 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 202 | IMAG     | EPHB3 | 0    | 1        | 1       | 2      |
|      | 230 | E:813520 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 209 | IMAG     | ESR1  | 5    | 1        | 1       | 1      |
|      | 127 | E:725321 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 208 | IMAG     | FABP7 | 0    | 2        | 2       | 4      |
|      | 830 | E:345626 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 209 | IMA      | FCGRT | 1    | 2        | 0       | 2      |
|      | 401 | GE:68894 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMA      | FEN1  | 6    | 3        | 1       | 2      |
|      | 049 | GE:49950 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 202 | IMAG     | F     | 3    | 1        | 1       | 3      |
|      | 657 | E:161992 | ER1L3 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | FN1   | 0    | 0        | 0+2     | 3+4    |
|      | 130 | E:139009 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | HLA-A | 0+1  | 0+1      | 3+1     | 4      |
|      | 559 | E:588819 |       |      |          |         |        |
|      |     |          |       |      |          |         |        |
|      | 27  | IMAG     |       |      |          |         |        |
|      | 571 | E:203527 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | HL    | 0    | 0        | 0       | 2+1    |
|      | 573 | E:593221 | A-QA1 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | ID1   | 0+2  | 0        | 0       | 0+2    |
|      | 790 | E:773766 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 200 | IMAG     | LUM   | 0    | 0        | 2       | 3      |
|      | 275 | E:813823 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | M     | 5    | 4        | 2       | 3      |
|      | 739 | E:814701 | AD2L1 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 208 | IMAG     | MAOB  | 0    | 1        | 3       | 1      |
|      | 341 | E:462953 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | MUC1  | 3    | 1        | 0       | 3      |
|      | 579 | E:840687 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 207 | IMAG     | MXRA5 | 1    | 1        | 0       | 3      |
|      | 310 | E:810224 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 26  | PC:2156  | P     | 0    | 1        | 3       | 1      |
|      | 941 |          | LEK\* |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 26  | MLC      | RA    | 1    | 4+1      | 3       | 1      |
|      | 972 | -PC:2214 | B31\* |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 203 | IMAG     | SH    | 0    | 0        | 1       | 0      |
|      | 052 | E:134948 | ROOM3 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 200 | IMA      | SL    | 4    | 0        | 1       | 2      |
|      | 708 | GE:52933 | C39A6 |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 27  | IMAG     | SPARC | 4    | 3        | 1       | 1      |
|      | 270 | E:324597 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 202 | IMAG     | THBS2 | 0    | 1        | 1       | 3      |
|      | 411 | E:191664 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 201 | IMAG     | TIMP2 | 0    | 0        | 1       | 3+2    |
|      | 385 | E:842846 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+
|      | 28  | IMAG     | TIMP3 | 2    | 2        | 2       | 1      |
|      | 973 | E:754106 |       |      |          |         |        |
+------+-----+----------+-------+------+----------+---------+--------+

Note: Counts indicated after the + sign refer to data sets with
differential expression found in the opposite direction compared to
Sotiriou's data set. Well ID is the unique identifier for each spot on
the microarray that identifies the source of the probes printed at that
location on the microarray. The Clone ID is the I.M.A.G.E. clone
identifier and can be used to search other databases to produce gene
annotations. The exception is for the clones with identities that
changed due to re-sequencing according to the information provided by
mAdb; for these re-sequenced clones only a mAdb local identifier can be
supplied as a clone ID, and these local identifiers cannot be searched
on in annotation databases. These re-sequenced clones are indicated in
the table with an asterisk.

**Table S2**

*Oncomine results based on testing for expression differences between
estrogen receptor-positive (ER+) and estrogen receptor-negative (ER-)
breast tumors in 19 independent data sets using the set of genes that
were found statistically significant for distinguishing ER status by
FEVS and not with no filtering(FEVS-exclusive genes)*

+-------+-----+---------+-------+------+---------+--------+--------+
|       |     |         |       | **Nu |         |        |        |
|       |     |         |       | mber |         |        |        |
|       |     |         |       | of   |         |        |        |
|       |     |         |       | data |         |        |        |
|       |     |         |       | sets |         |        |        |
|       |     |         |       | w    |         |        |        |
|       |     |         |       | here |         |        |        |
|       |     |         |       | p-v  |         |        |        |
|       |     |         |       | alue |         |        |        |
|       |     |         |       | is** |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | **W | **Clone | *     | **P\ | **.0    | **.001 | **     |
|       | ell | ID**    | *Gene | <.00 | 001[\<] | [\<]{. | .01[\< |
|       | I   |         | Sym   | 01** | {.under | underl | ]{.und |
|       | D** |         | bol** |      | line}P\ | ine}P\ | erline |
|       |     |         |       |      | <.001** | <.01** | }P[\<] |
|       |     |         |       |      |         |        | {.unde |
|       |     |         |       |      |         |        | rline} |
|       |     |         |       |      |         |        | .05**  |
+-------+-----+---------+-------+------+---------+--------+--------+
| *     | 203 | IMAGE   | B     | 2    | 2       | 3      | 2      |
| *FEVS | 011 | :365098 | NIP3L |      |         |        |        |
| -excl |     |         |       |      |         |        |        |
| usive |     |         |       |      |         |        |        |
| genes |     |         |       |      |         |        |        |
| found |     |         |       |      |         |        |        |
| allow |     |         |       |      |         |        |        |
| ing** |     |         |       |      |         |        |        |
|       |     |         |       |      |         |        |        |
| **0   |     |         |       |      |         |        |        |
| err   |     |         |       |      |         |        |        |
| ors** |     |         |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | C10o  | 8    | 3       | 1      | 0      |
|       | 679 | :740941 | rf116 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 205 | IMAGE   | C1    | 2    | 1       | 0      | 0      |
|       | 159 | :155072 | orf64 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 209 | IMAGE   | C4B   | 8    | 2       | 1      | 0      |
|       | 170 | :868652 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | CD3D  | 2    | 2       | 2      | 2      |
|       | 771 | :377560 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | MLC-    | C     | 8    | 1       | 4      | 2      |
|       | 857 | PC:2279 | ST3\* |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | C     | 6    | 2       | 2      | 3      |
|       | 885 | :967284 | XCL10 |      |         |        |        |
|       |     |         |       |      |         |        |        |
|       | 27  | IMAGE   |       |      |         |        |        |
|       | 463 | :491243 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | CXCL9 | 4    | 2       | 1      | 4      |
|       | 655 | :503617 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | DCTN1 | 0    | 0       | 0+3    | 0+2    |
|       | 186 | :877613 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | DUSP5 | 0+2  | 0+1     | 0+5    | 0+3    |
|       | 445 | :342378 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | PC:2237 | FRMD6 | 1    | 0       | 1      | 1      |
|       | 819 |         |       |      |         |        |        |
|       |     |         | C14or |      |         |        |        |
|       |     |         | f31\* |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | HPN   | 8    | 0       | 1      | 3      |
|       | 494 | :208413 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | IFI27 | 1    | 0       | 1      | 0      |
|       | 415 | :588915 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | IRS1  | 11   | 3       | 0      | 0      |
|       | 405 | :796284 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | ITGB5 | 5    | 4       | 1      | 1      |
|       | 196 | :202074 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAGE   | KRT6A | 6    | 1       | 5      | 0+1    |
|       | 615 | :592540 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | LYZ   | 1    | 1       | 0      | 1      |
|       | 754 | :293925 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | MMP7  | 5    | 6       | 2      | 0      |
|       | 294 | :338835 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | MT1X  | 2    | 0       | 0      | 0      |
|       | 428 | :297392 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAGE   | MUC1  | 6    | 3       | 1      | 1      |
|       | 579 | :840687 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAG    | NPY1R | 8    | 2       | 0      | 3      |
|       | 559 | E:33045 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAGE   | ODC1  | 9    | 2       | 1      | 0      |
|       | 549 | :796646 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 207 | IMAGE   | PDCD4 | 5    | 5       | 0      | 3      |
|       | 988 | :210486 |       |      |         |        |        |
|       |     |         |       |      |         |        |        |
|       | 202 | IMAG    |       |      |         |        |        |
|       | 482 | E:29448 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 26  | PC:2156 | P     | 3    | 3       | 4      | 1      |
|       | 941 |         | LEK\* |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAG    | PROM1 | 7    | 3       | 2      | 0      |
|       | 918 | E:27544 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 207 | IMAGE   | RAB6A | 1    | 1       | 0      | 2+1    |
|       | 784 | :321470 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 209 | IMAG    | R     | 1    | 1       | 0+2    | 0+1    |
|       | 407 | E:61008 | B1CC1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | RA    | 0+1  | 0       | 2+2    | 0+5    |
|       | 031 | :429434 | D51L1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | MLC-    | S     | 0    | 0       | 3+1    | 4+1    |
|       | 153 | PC:2415 | OS2\* |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
| *     | 209 | IMAG    | ARG2  | 2    | 1       | 0+1    | 3      |
| *FEVS | 253 | E:50480 |       |      |         |        |        |
| -excl |     |         |       |      |         |        |        |
| usive |     |         |       |      |         |        |        |
| genes |     |         |       |      |         |        |        |
| found |     |         |       |      |         |        |        |
| allow |     |         |       |      |         |        |        |
| ing** |     |         |       |      |         |        |        |
|       |     |         |       |      |         |        |        |
| **10  |     |         |       |      |         |        |        |
| err   |     |         |       |      |         |        |        |
| ors** |     |         |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | CD53  | 2    | 2       | 2      | 2      |
|       | 682 | :504226 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 209 | IMAGE   | CD83  | 1    | 1       | 4      | 4+1    |
|       | 214 | :530185 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 209 | IMAGE   | CP    | 2    | 4       | 4      | 3      |
|       | 188 | :223350 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | E     | 0    | 1       | 0      | 0      |
|       | 874 | :857319 | IF3S4 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | ENPP1 | 6    | 1       | 0      | 0      |
|       | 331 | :786041 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 200 | IMAGE   | FA    | 0    | 3       | 4      | 4      |
|       | 914 | :283301 | M13A1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | HDAC2 | 0+8  | 0+3     | 0+3    | 0      |
|       | 471 | :502668 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | HLA-A | 2+2  | 5+1     | 2+1    | 1+1    |
|       | 572 | :588819 |       |      |         |        |        |
|       |     |         |       |      |         |        |        |
|       | 27  | IMAGE   |       |      |         |        |        |
|       | 571 | :203527 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | HLA-C | 1    | 1       | 5      | 2      |
|       | 032 | :159142 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | HLA   | 0    | 2       | 3      | 3      |
|       | 355 | :854444 | -DQB1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | HLA-E | 6    | 1       | 5      | 0+3    |
|       | 098 | :198453 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | HSPB8 | 5    | 1       | 4      | 3      |
|       | 650 | :205049 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | ID1   | 0    | 0       | 0      | 1      |
|       | 791 | :773766 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 28  | IMAGE   | IGHA1 | 0    | 1       | 2      | 6+1    |
|       | 369 | :740018 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAG    | IGL@  | 8+1  | 3+2     | 1+1    | 0+2    |
|       | 439 | E:66560 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | IGLL1 | 1    | 1       | 1      | 3+1    |
|       | 418 | :344134 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | LRP8  | 9    | 2       | 3      | 0      |
|       | 521 | :415554 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 209 | IMAGE   | M6    | 0    | 0       | 0      | 0      |
|       | 340 | :731356 | PRBP1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | M     | 0    | 0       | 2      | 1      |
|       | 525 | :382773 | ALAT1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 208 | IMAGE   | MAOB  | 1    | 0       | 2      | 3      |
|       | 341 | :462953 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | MLC-    | MAP   | 8    | 3       | 2      | 1      |
|       | 044 | PC:2031 | RE2\* |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAGE   | MX1   | 2    | 0       | 0      | 4      |
|       | 569 | :815542 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | PTPRC | 2    | 2       | 1      | 2      |
|       | 123 | :239287 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAGE   | SFRS5 | 6    | 0       | 5+1    | 2      |
|       | 676 | :898265 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 27  | IMAGE   | SPARC | 1    | 2       | 5      | 1      |
|       | 270 | :324597 |       |      |         |        |        |
|       |     |         |       |      |         |        |        |
|       | 27  | IMAGE   |       |      |         |        |        |
|       | 592 | :625016 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 201 | IMAGE   | SRGN  | 3    | 2       | 2      | 6      |
|       | 482 | :703581 | /PRG1 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | TBCA  | 3    | 1+1     | 1+2    | 5+1    |
|       | 916 | :307882 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | WFDC2 | 2    | 2       | 1      | 1      |
|       | 231 | :786675 |       |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | ZM    | 2    | 1       | 4      | 2      |
|       | 211 | :898108 | YND11 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+
|       | 202 | IMAGE   | Z     | 1    | 1       | 1      | 3+1    |
|       | 838 | :146081 | NF238 |      |         |        |        |
+-------+-----+---------+-------+------+---------+--------+--------+

Note: Counts indicated after the + sign refer to data sets with
differential expression found in the opposite direction compared to
Sotiriou's data set. Well ID is the unique identifier for each spot on
the microarray that identifies the source of the probes printed at that
location on the microarray. The Clone ID is the I.M.A.G.E. clone
identifier and can be used to search other databases to produce gene
annotations. The exception is for the clones with identities that
changed due to re-sequencing according to the information provided by
mAdb; for these re-sequenced clones only a mAdb local identifier can be
supplied as a clone ID and these local identifiers cannot be searched on
in annotation databases. These re-sequenced clones are indicated in the
table with an asterisk.