**JCVI/JHU Cancer Sequencing Demonstration Project**

**Gene List**

  ------ ---------- ------------------------------------------- ---------------- -------------
  * *    ***Gene    ***Gene Symbol***                           ***RefSeq***     * **Type***
         Name***                                                                 

  *1*    *TP53*     *Cellular tumor antigen p53*                *NM_000546*      *Control*

  *2*    *PTEN*     *Phosphatidylinositol-3,4,5-trisphosphate   *NM_000314*      *Control*
                    3-phosphatase*                                               

  *3*    *EGFR*     *Epidermal growth factor receptor*          *NM_005228*      *Control*

  *4*    *PIK3CA*   *Phosphatidylinositol-4,5-bisphosphate      *NM_006218*      *Control*
                    3-kinase catalytic subunit,* α *isoform*                     

  *5*    *FGFR1*    *Fibroblast growth factor receptor 1        *NM_000604.2*    *Control*
                    isoform 1 precursor*                                         

  *6*    *ROS1*     *Proto-oncogene tyrosine-protein kinase ROS *NM_002944*      *Control*
                    precursor*                                                   

  *7*    *PDGFRA*   *Alpha platelet-derived growth factor       *NM_006206*      *Control*
                    receptor precursor*                                          

  *8*    *NOTCH1*   *Notch homolog 1, translocation-associated* *NM_017617*      *Control*

  *9*    *ALK*      *ALK tyrosine kinase receptor precursor*    *NM_004304*      *RTK*

  *10*   *INSR*     *Insulin receptor*                          *NM_000208*      *RTK*

  *11*   *INSRR*    *Insulin receptor-related receptor*         *NM_014215*      *RTK*

  *12*   *TGFBR1*   *Transforming growth factor, beta receptor  *NM_004612*      *RTK*
                    II (70/80kDa)*                                               

  *13*   *ERBB4*    *V-erb-a erythroblastic leukemia viral      *NM_005235*      *RTK*
                    oncogene homolog 4 (avian)*                                  

  *14*   *EPHB1*    *EPH receptor B1*                           *NM_004441*      *RTK*

  *15*   *EPHA5*    *EPH receptor A5*                           *NM_004439*      *RTK*

  *16*   *PTK7*     *PTK7 protein tyrosine kinase 7*            *NM_152883*      *RTK*

  *17*   *HDAC1*    *Histone deacetylase 1*                     *NM_004964*      *HDAC*

  *18*   *HDAC2*    *Histone deacetylase 2*                     *NM_016621*      *HDAC*

  *19*   *HDAC3*    *Histone deacetylase 3*                     *NM_003883*      *HDAC*

  *20*   *HDAC4*    *Histone deacetylase 4*                     *NM_006037*      *HDAC*

  *21*   *HDAC5*    *Histone deacetylase 5*                     *NM_001015053*   *HDAC*

  *22*   *HDAC6*    *Histone deacetylase 6*                     *NM_006044*      *HDAC*

  *23*   *HDAC7A*   *Histone deacetylase 7a*                    *NM_016596*      *HDAC*

  *24*   *HDAC8*    *Histone deacetylase 8*                     *NM_018486*      *HDAC*

  *25*   *HDAC9*    *Histone deacetylase 9*                     *NM_058176*      *HDAC*

  *26*   *HDAC10*   *Histone deacetylase 10*                    *NM_032019*      *HDAC*

  *27*   *HDAC11*   *Histone deacetylase 11*                    *NM_024827*      *HDAC*

  *28*   *SCN10A*   *Sodium channel protein type X alpha        *NM_006514*      *HDAC*
                    subunit*                                                     

  *29*   *SC11A*    *Sodium channel protein type XI alpha       *NM_014139*      *SCP*
                    subunit*                                                     

  *30*   *SCN1A*    *Sodium channel protein type I alpha        *N/A*            *SCP*
                    subunit*                                                     

  *31*   *SCN2A2*   *Sodium channel protein type II alpha       *NM_021007*      *SCP*
                    subunit*                                                     

  *32*   *SCN3A*    *Sodium channel protein type III alpha      *NM_006922*      *SCP*
                    subunit*                                                     

  *33*   *SCN4A*    *Sodium channel protein type IV alpha       *NM_000334*      *SCP*
                    subunit*                                                     

  *34*   *SCN5A*    *Sodium channel protein type V alpha        *NM_000335*      *SCP*
                    subunit*                                                     

  *35*   *SCN7A*    *Sodium channel protein type VII alpha      *NM_002976*      *SCP*
                    subunit*                                                     

  *36*   *SCN8A*    *Sodium channel protein type VIII alpha     *NM_014191*      *SCP*
                    subunit*                                                     

  *37*   *SCN11A*   *Sodium channel protein type XI alpha       *NM_014139.1*    *SCP*
                    subunit*                                                     
  ------ ---------- ------------------------------------------- ---------------- -------------