---------- ------------- ------------ ------------- ----------- ------------ ------------ ------------- ------- --------- --------
  LTR Name   Greek Letter  Chromosome   Chromosomal   Cosmid      Cosmid       Cosmid       LTR           TSD     Full      LTR
             Designation                Coordinate                Coordinate   coordinate   orientation           Length    Length
                                        (LTR Center)              (LTR start)  (LTR end)    on Chromosome         Element   

  PALW_001                 1            1408          SPAC1348    1295         1521         1                               227

  PALC_002                 1            5013          SPAC1348    4835         5191         -1                              357

  PALW_003                 1            11296         SPAC1348    44344        44382        1                               39

  PALW_004   θ             1            41515         SPAPB8B6    2939         3212         1                               274

  PALC_005                 1            57185         SPAPB8B6    18712        18779        -1                              68

  PALW_006                 1            57431         SPAPB8B6    18821        19162        1                               342

  PALC_007                 1            57709         SPAPB8B6    19174        19366        -1                              193

  PALC_008                 1            62633         SPAC977     3175         3213         -1                              39

  PALW_009                 1            84353         SPAC977     24736        25091        1                               356

  PALC_010                 1            103482        SPAPJ695    3183         3479         -1                              297

  PALW_011                 1            103879        SPAPJ695    3649         3807         1                               159

  PALC_012                 1            109438        SPAPJ695    9180         9393         -1                              214

  PALW_013                 1            128606        SPAC1F8     17805        18162        1                               358

  PALC_014                 1            128694        SPAC1F8     18152        18322        -1                              171

  PALW_015                 1            136193        SPAC1F8     25591        25903        1                               313

  PALC_016                 1            143094        SPAC11D3    6225         6300         -1                              76

  PALC_017                 1            302456        SPAC1F5     17622        17701        -1                              80

  PALW_018                 1            304867        SPAC1F5     20045        20100        1                               56

  PALC_019   β             1            426873        SPAC31A2    9490         9837         -1            TCTTA             348

  PALW_020   γ             1            432272        SPAC31A2    14876        15249        1                               374

  PALC_021                 1            593160        SPAC2F7     31861        32150        -1                              290

  PALW_022   α             1            647217        SPAC1F3     6162         6511         1             TTATT             350

  PALC_023                 1            699635        SPAC1D4     30475        30820        -1                              346

  PALC_024                 1            708247        SPAC22F3    8021         8322         -1                              302

  PALC_025                 1            857965        SPAC2G11    22325        22505        -1                              181

  PALW_026   α             1            1034747       SPAC821     27628        27985        1             CGATA             358

  PALW_027                 1            1074427       SPAC23C4    13741        13960        1                               220

  PALW_028   α             1            1148288       SPAC30D11   26386        26742        1                               357

  PALW_029   α             1            1172487       SPAC56F8    21057        21365        1                               309

  PALC_030   ι             1            1178421       SPAC56F8    27042        27247        -1                              206

  PALW_031                 1            1221555       SPAC4C5     555          867          1                               313

  PALC_032   α             1            1295664       SPAC1420    4330         4687         -1            TTAGT             358

  PALW_033   θ             1            1428459       SPAC20G8    9365         9674         1                               310

  PALW_034   η             1            1474150       SPAC3A12    24940        25302        1             TTGAA             363

  PALW_035   β             1            1495182       SPAC9       11035        11383        1             ATTTC   Tf2-1     349

  PALC_036   β             1            1499749       SPAC9       15602        15950        1             ATTTC   Tf2-1     349

  PALW_037   β             1            1593667       SPAC167     14955        15303        1             ATATT   Tf2-2     349

  PALC_038   β             1            1598234       SPAC1705    619          967          -1            ATATT   Tf2-2     349

  PALW_039   ε             1            1693338       SPAC343     24016        24351        1                               336

  PALW_040                 1            2029483       SPAC767     1959         2242         1                               284

  PALW_041   β             1            2041858       SPAC17H9    12308        12636        1                               329

  PALW_042                 1            2199099       SPAC23C11   36167        36235        1                               69

  PALC_043                 1            2203745       SPAC13F5    2412         2751         -1                              340

  PALW_044                 1            2216634       SPAC1783    325          668          1                               344

  PALW_045                 1            2292510       SPAC4G9     9532         9566         1                               35

  PALW_046                 1            2445358       SPAC6B12    8733         9088         1                               356

  PALW_047   α             1            2467436       SPAC6B12    30809        31166        1             TAAAG             358

  PALC_048   β             1            2504086       SPAC19A8    17946        18294        -1                              349

  PALW_049   β             1            2635207       SPAC823     23853        24200        1                               348

  PALC_050   ε             1            2723733       SPAC644     21438        21777        -1            GTATT             340

  PALC_051                 1            2873602       SPAC3F10    27606        27938        -1                              333

  PALW_052   β             1            2883908       SPAC8F11    616          964          1             TTGGC             349

  PALC_053   β             1            2956656       SPAC2E1P3   3666         4014         -1            TGTTT   Tf2-3     349

  PALC_054   β             1            2961223       SPAC2E1P3   8233         8581         -1            TGTTT   Tf2-3     349

  PALC_055                 1            2969820       SPAPB2C8    3773         3945         -1                              173

  PALC_056   β             1            2971795       SPAPB2C8    5660         6008         -1                              349

  PALC_057   α             1            3073286       SPAC24C9    4780         5137         -1            CGTAT             358

  PALW_058                 1            3102309       SPAC24C9    33809        34155        1                               347

  PALW_059                 1            3164424       SPAC688     22555        22899        1                               345

  PALW_060   α             1            3220810       SPAC1486    7499         7856         1             TATCT             358

  PALW_061                 1            3263520       SPAC6G10    20736        20782        1                               47

  PALW_062                 1            3275182       SPAC6G9     3861         4204         1                               344

  PALW_063   α             1            3351322       SPAPB1E7    39415        39772        1             ATAGT             358

  PALC_064   β             1            3390999       SPAC26A3    27042        27390        -1            CTTAA   Tf2-4     349

  PALC_065   β             1            3395565       SPAC26A3    31608        31956        -1            CTTAA   Tf2-4     349

  PALW_066                 1            3445889       SPAC3H5     5904         5942         1                               39

  PALC_067                 1            3455107       SPAC3H5     15105        15177        -1                              73

  PALW_068                 1            3468063       SPAC3H5     27932        28147        1                               216

  PALC_069                 1            3507895       SPAC328     6344         6552         -1                              209

  PALW_070                 1            3616057       SPAC17A2    35999        36062        1                               64

  PARW_071                 1            3948832       SPAC2F3     1813         2164         1                               352

  PARW_072   ξ             1            4020173       SPAPB15E9   7485         7769         1                               285

  PARC_073   β             1            4020626       SPAPB15E9   7906         8254         -1            GGAAT   Tf2-5     349

  PARC_074   β             1            4025193       SPAC27E2    21           369          -1            GGAAT   Tf2-5     349

  PARW_075   β             1            4046579       SPAC27E2    21407        21755        1             TTTTA   Tf2-6     349

  PARW_076   β             1            4051146       SPAC27E2    25974        26322        1             TTTTA   Tf2-6     349

  PARC_077   α             1            4165146       SPAC26H5    25287        25644        -1            ATAAC             358

  PARW_078   γ             1            4312171       SPAC2C4     26636        27014        1                               379

  PARW_079   ι             1            4318805       SPAC2C4     33313        33604        1                               292

  PARW_080                 1            4475080       SPAC9E9     15884        15935        1                               52

  PARC_081                 1            4549896       SPAC27D7    23032        23191        -1                              160

  PARW_082                 1            4550264       SPAC27D7    23399        23560        1                               162

  PARC_083                 1            4552933       SPAC27D7    26068        26227        -1                              160

  PARW_084                 1            4553301       SPAC27D7    26436        26597        1                               162

  PARW_085   ξ             1            4643819       SPAC1093    9979         10284        1             TAAAA             306

  PARC_086                 1            4735030       SPAC1834    18192        18289        -1                              98

  PARC_087   α             1            4741499       SPAC1834    24531        24888        -1            TGTAG             358

  PARW_088                 1            4741850       SPAC1834    24906        25215        1                               310

  PARC_089   α             1            4923216       SPAC19B12   21213        21570        -1            TAATA             358

  PARW_090                 1            4936575       SPAPB8E5    3939         4076         1                               138

  PARW_091                 1            4944855       SPAPB8E5    12108        12467        1                               360

  PARW_092   ξ             1            4965325       SPAC1B3     12901        13252        1             TACAA             352

  PARW_093   β             1            4967422       SPAC1B3     15000        15348        1             TTAAA             349

  PARW_094   β             1            5047262       SPAC22E12   1334         1682         1             TTCCT             349

  PARC_095                 1            5092117       SPAC1006    276          623          -1                              348

  PARC_096                 1            5092455       SPAC1006    624          951          -1                              328

  PARW_097   β             1            5201580       SPAC26F1    28943        29291        1             TAAAG             349

  PARC_098   β             1            5216447       SPAC13D1    4466         4814         -1            CTTAT   Tf2-8     349

  PARC_099   β             1            5221014       SPAC19D5    318          666          -1                    Tf2-7/8   349

  PARC_100   β             1            5225581       SPAC19D5    4885         5233         -1            CTTAT   Tf2-7     349

  PARC_101   ι             1            5226018       SPAC19D5    5328         5663         -1                              336

  PARC_102                 1            5281845       SPAC14C4    30969        31092        -1                              124

  PARC_103   β             1            5350851       SPAP8A3     10569        10917        -1            ACTAT             349

  PARW_104                 1            5477606       SPAC1039    8073         8133         1                               61

  PARC_105                 1            5522008       SPAC869     6788         7138         -1                              351

  PARC_106   γ             1            5567225       SPAC186     16780        17088        -1                              309

  PARC_107                 1            5584495       SPAC750     4082         4166         -1                              85

  PARW_108                 1            5589452       SPAC750     9062         9100         1                               39

  PARC_109                 1            5595720       SPAC750     15218        15480        -1                              263

  PARC_110                 1            5607023       SPAC212     1184         1540         -1                              357

  PARW_111                 1            5610632       SPAC212     4858         5083         1                               226

  PARC_112                 1            5614127       SPAC212     8335         8597         -1                              263

  PARC_113                 1            5622069       SPAC212     16385        16430        -1                              46

  PBLC_001                 2            13388         SPBPB10D8   13216        13559        -1                              344

  PBLC_002                 2            16147         SPBPB10D8   15975        16318        -1                              344

  PBLC_003                 2            18906         SPBPB10D8   18734        19077        -1                              344

  PBLC_004                 2            21665         SPBPB10D8   21493        21836        -1                              344

  PBLW_005                 2            378352        SPBC428     17708        18050        1                               343

  PBLW_006                 2            513701        SPBC1706    6120         6250         1                               131

  PBLC_007   α             2            596156        SPBC947     35826        36181        -1                              356

  PBLW_008   α             2            659616        SPBC119     26956        27314        1             GTTAA             359

  PBLC_009                 2            766576        SPBC36      15637        15986        -1            CCTTT             350

  PBLW_010                 2            862347        SPBC646     21387        21731        1                               345

  PBLC_011                 2            954186        SPBC337     3758         3892         -1                              135

  PBLW_012                 2            999058        SPBC1734    18211        18545        1                               335

  PBLW_013                 2            1040283       SPBC1709    22806        23143        1                               338

  PBLC_014                 2            1277747       SPBC8D2     715          765          -1                              51

  PBLW_015                 2            1329939       SPBC17A3    9828         10004        1                               177

  PBLC_016                 2            1451366       SPBC83      21312        21416        -1                              105

  PBLC_017   η             2            1452467       SPBC83      22316        22613        -1                              298

  PBRW_018                 2            1579744       SPBC21B10   24875        24913        1                               39

  PBRC_019                 2            1722080       SPBC18H10   34254        34284        -1                              31

  PBRW_020                 2            1724318       SPBC18H10   36433        36581        1                               149

  PBRC_021   γ             2            1726559       SPBC18H10   38560        38936        -1                              377

  PBRC_022   β             2            1733122       SPBC9B6     1990         2338         -1            TTAAT   Tf2-9     349

  PBRC_023   β             2            1737687       SPBC9B6     6555         6903         -1            TTAAT   Tf2-9     349

  PBRW_024   γ             2            1747017       SPBC9B6     15871        16247        1                               377

  PBRW_025   β             2            1885648       SPBC1E8     8941         9289         1             TATAA   Tf2-10    349

  PBRW_026   β             2            1890214       SPBC1E8     13507        13855        1             TATAA   Tf2-10    349

  PBRC_027   α             2            1933004       SPBP23A10   14596        14796        -1                              201

  PBRW_028                 2            1933130       SPBP23A10   14704        14939        1                               236

  PBRC_029                 2            2001702       SPBC18E5    4675         5022         -1            TTATA             348

  PBRW_030   ξ             2            2012166       SPBC18E5    15160        15466        1             GCTAA             307

  PBRW_031                 2            2084288       SPBC1711    32468        32816        1             TGTTA             349

  PBRC_032   α             2            2260720       SPBC24C6    20312        20664        -1                              353

  PBRC_033   β             2            2300934       SPBC19G7    34503        34850        -1                              348

  PBRW_034                 2            2346490       SPBC21D10   6435         6518         1                               84

  PBRC_035   β             2            2346761       SPBC21D10   6574         6922         -1            TATCA             349

  PBRW_036   β             2            2557592       SPBC6B1     12269        12597        1             ATTGG             329

  PBRW_037                 2            2585703       SPBC3E7     9714         9828         1                               115

  PBRC_038   ε             2            2657265       SPBC336     4102         4169         -1                              68

  PBRW_039                 2            2657269       SPBC336     3978         4301         1                               324

  PBRC_040   α             2            3026601       SPBC1778    9873         10230        -1            AACTA             358

  PBRW_041                 2            3057001       SPBC4C3     21474        21623        1                               150

  PBRW_042                 2            3089726       SPBC609     12127        12417        1                               291

  PBRW_043                 2            3143241       SPBC21      8342         8374         1                               33

  PBRC_044                 2            3172207       SPBC25H2    5943         6063         -1                              121

  PBRC_045   β             2            3203633       SPBC20F10   28           376          -1            TTGCG             349

  PBRW_046                 2            3384961       SPBC2G2     29126        29166        1                               41

  PBRC_047                 2            3394996       SPBC1718    2761         2816         -1                              56

  PBRW_048                 2            3395111       SPBC1718    2861         2947         1                               87

  PBRC_049   β             2            3410076       SPBC1718    17695        18043        -1                              349

  PBRC_050   ι             2            3410718       SPBC1718    18335        18687        -1                              353

  PBRC_051   ε             2            3411056       SPBC1718    18701        18988        -1                              288

  PBRC_052                 2            3579816       SPBP8B7     26515        26862        -1                              348

  PBRW_053                 2            3597500       SPBP8B7     44204        44541        1                               338

  PBRC_054                 2            3634807       SPBC25D12   1990         2339         -1                              350

  PBRW_055                 2            3634823       SPBC25D12   2154         2207         1                               54

  PBRW_056                 2            3743081       SPBC21C3    31359        31420        1                               62

  PBRC_057                 2            3855296       SPBC1677    2244         2319         -1                              76

  PBRW_058   β             2            3968178       SPBC215     23214        23562        1             TAATT             349

  PBRW_059                 2            4081381       SPBC14F5    10332        10673        1                               342

  PBRC_060   ξ             2            4081707       SPBC14F5    10676        10981        -1                              306

  PBRC_061                 2            4138749       SPBC16G5    2543         2889         -1            GTTAA             347

  PBRW_062   θ             2            4152297       SPBC16G5    16093        16435        1                               343

  PBRW_063                 2            4156767       SPBC16G5    20708        20760        1                               53

  PBRW_064   α             2            4217267       SPBC16A3    38444        38801        1                               358

  PBRW_065   ε             2            4330565       SPBC8E4     641          987          1                               347

  PBRC_066                 2            4330570       SPBC8E4     794          844          -1                              51

  PBRW_067   α             2            4334942       SPBC8E4     5032         5324         1                               293

  PBRW_068   β             2            4339482       SPBC8E4     9557         9905         1                               349

  PBRC_069   γ             2            4357630       SPBC8E4     27738        28019        -1                              282

  PBRC_070                 2            4358216       SPBC8E4     28424        28505        -1                              82

  PBRW_071   β             2            4358451       SPBC8E4     28346        28695        1             AACTA             350

  PBRC_072                 2            4358648       SPBC8E4     28848        28945        -1                              98

  PBRW_073                 2            4395716       SPBPB2B2    17789        17832        1                               44

  PBRC_074                 2            4395802       SPBPB2B2    17873        17920        -1                              48

  PBRW_075                 2            4402076       SPBPB2B2    24147        24195        1                               49

  PBRC_076   α             2            4402269       SPBPB2B2    24196        24531        -1            ATAGT             336

  PBRW_077                 2            4402642       SPBPB2B2    24637        24836        1                               200

  PBRW_078                 2            4422268       SPBPB2B2    44344        44382        1                               39

  PBRC_079                 2            4428510       SPBPB2B2    50427        50783        -1                              357

  PCLW_001                 3            26495         SPCC569     25073        25377        1                               305

  PCLC_002                 3            31785         SPCP20C8    31728        31841        -1                              114

  PCLC_003   β             3            43285         SPCC1884    9978         10326        -1                              349

  PCLW_004   ξ             3            49384         SPCC757     5120         5453         1                               334

  PCLW_005   ξ             3            108710        SPCC330     5045         5352         1             GATAA             308

  PCLC_006                 3            111491        SPCC330     7910         8049         -1                              140

  PCLC_007   β             3            114556        SPCC330     10871        11219        -1            ACCAA             349

  PCLW_008   α             3            187265        SPCC1235    11503        11860        1             TAACC             358

  PCLW_009                 3            218553        SPCC548     2087         2294         1                               208

  PCLC_010                 3            223119        SPCC548     6630         6884         -1                              255

  PCLW_011                 3            223270        SPCC548     6894         6921         1                               28

  PCLC_012                 3            254388        SPCC794     15349        15424        -1                              76

  PCLC_013                 3            257357        SPCC794     18182        18530        -1                              349

  PCLC_014                 3            286907        SPCC553     6994         7351         -1                              358

  PCLC_015   δ             3            298719        SPCC553     18813        19156        -1                              344

  PCLW_016   η             3            299054        SPCC553     19156        19483        1                               328

  PCLC_017   β             3            381815        SPCC1682    12213        12561        -1            TACCA             349

  PCLC_018                 3            486688        SPCC364     14752        14977        -1                              226

  PCLC_019   β             3            489234        SPCC970     2415         2739         -1                              325

  PCLW_020   α             3            489536        SPCC970     2718         3040         1                               323

  PCLW_021   α             3            500130        SPCC970     13294        13651        1             ATTAT             358

  PCLC_022                 3            500460        SPCC970     13713        13892        -1                              180

  PCLC_023                 3            552826        SPCC962     8556         8697         -1                              142

  PCLW_024                 3            615079        SPCC1183    23339        23697        1                               359

  PCLW_025   β             3            701956        SPCC16C4    43950        44298        1                               349

  PCLW_026                 3            721313        SPCC18B5    9159         9191         1                               33

  PCLC_027   β             3            777908        SPCC1020    25296        25644        -1            CTTAA   Tf2-12    349

  PCLC_028   β             3            782475        SPCC1020    29863        30211        -1            CTTAA   Tf2-12    349

  PCLW_029   ξ             3            954714        SPCPB16A4   12024        12315        1                               292

  PCLC_030                 3            958801        SPCPB16A4   16168        16344        -1                              177

  PCLW_031                 3            1016620       SPCC895     21016        21078        1                               63

  PCRC_032                 3            1177323       SPCC4B3     37746        38085        -1                              340

  PCRC_033                 3            1196922       SPCC550     10491        10565        -1                              75

  PCRW_034   α             3            1208225       SPCC550     21653        22009        1                               357

  PCRC_035                 3            1267449       SPCC23B6    2461         2504         -1                              44

  PCRW_036                 3            1352266       SPCC338     12144        12452        1                               309

  PCRW_037   β             3            1401944       SPCC1281    22526        22874        1                               349

  PCRC_038   β             3            1467168       SPCC11E10   12568        12885        -1                              318

  PCRW_039                 3            1467482       SPCC11E10   12943        13139        1                               197

  PCRW_040                 3            1497619       SPCC188     23820        24186        1             TTTTC             367

  PCRW_041   β             3            1531224       SPCC584     30135        30483        1             TTTGA             349

  PCRW_042   β             3            1575798       SPCC162     21632        21979        1             GTTAA             348

  PCRC_043   ξ             3            1580251       SPCC162     26084        26434        -1                              351

  PCRC_044   β             3            1583053       SPCC162     28890        29231        -1                              342

  PCRC_045                 3            1630596       SPCC663     2012         2328         -1                              317

  PCRW_046                 3            1633245       SPCC663     4770         4868         1                               99

  PCRC_047   α             3            1633267       SPCC663     4662         5019         -1            TTTTA             358

  PCRW_048                 3            1685619       SPCC417     16212        16494        1                               283

  PCRC_049   β             3            1717355       SPCC191     12088        12436        -1                              349

  PCRC_050                 3            1739438       SPCC1450    11564        11804        -1                              241

  PCRW_051                 3            1739568       SPCC1450    11799        11828        1                               30

  PCRC_052                 3            1742034       SPCC1450    14107        14453        -1                              347

  PCRC_053   δ             3            1809917       SPCC285     13241        13558        -1                              318

  PCRC_054   α             3            1863106       SPCC1223    28684        29041        -1            TTTCT             358

  PCRW_055   ξ             3            1895301       SPCC737     8710         9014         1                               305

  PCRC_056   ξ             3            2018075       SPCC1906    5431         5772         -1                              342

  PCRC_057                 3            2023015       SPCC1906    10366        10717        -1                              352

  PCRW_058   δ             3            2041870       SPCC1739    14156        14498        1                               343

  PCRC_059                 3            2064753       SPCC1739    37174        37246        -1                              73

  PCRW_060                 3            2064921       SPCC1739    37259        37497        1                               239

  PCRW_061   α             3            2084997       SPCC576     3750         4106         1                               357

  PCRC_062   η             3            2109360       SPCC576     28119        28462        -1                              344

  PCRC_063                 3            2111907       SPCC576     30685        30990        -1                              306

  PCRC_064   β             3            2120863       SPCC126     4203         4551         -1            CAAAT             349

  PCRW_065   δ             3            2146169       SPCC1620    1387         1716         1                               330

  PCRW_066                 3            2148907       SPCC1620    4117         4462         1                               346

  PCRC_067   β             3            2149228       SPCC1620    4437         4785         -1                              349

  PCRC_068   β             3            2159821       SPCC1620    15030        15378        -1            CATTA             349

  PCRW_069   α             3            2181554       SPCC830     6659         7016         1             GAAAT             358

  PCRC_070                 3            2211320       SPCC1919    5327         5653         -1                              327

  PCRC_071   β             3            2211714       SPCC1919    5710         6058         -1            TACCA             349

  PCRC_072                 3            2223757       SPCC1919    17761        18092        -1                              332

  PCRW_073                 3            2231004       SPCC1919    25124        25224        1                               101

  PCRC_074                 3            2231441       SPCC1919    25437        25785        -1                              349

  PCRC_075   β             3            2320995       SPCC1494    4527         4875         -1            TCAGG   Tf2-13    349

  PCRC_076   β             3            2325561       SPCC1494    9093         9441         -1                    Tf2-13    349

  PCRW_077                 3            2401934       SPCP1E11    13645        13976        1                               332

  PCRC_078   ε             3            2406947       SPCP1E11    18651        18996        -1                              346

  PCRW_079   ξ             3            2419141       SPCC569     5703         5990         1                               288

  PCRW_080   γ             3            2423407       SPCC569     9933         10293        1                               361

  PCRW_081                 3            2433254       SPCC569     19903        20017        1                               115

  PCRW_082                 3            2438519       SPCC569     25073        25377        1                               305
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