AndreaBozzo/ceres-open-data-index huggingface dataset:
Data of beehive connected scales across Europe

[Lien vers la fiche source] Raw data from 137 beehive connected scales located in France (45), Germany (46), and Greece (46). Scales providers are Wolf Waagen in Germany (https://www.wolf-waagen.de), Optibee in France (https://www.optibee.fr/), and Terra Spatium in Greece (http://www.terraspatium.gr/). There is a separate file for each country, comprising a list of scale data frames named after their identification number. Data frames are composed of 5 variables : - idScale ; character ; scale identification number - createdAt_UTC ; POSIXct ; timestamp in UTC - weight ; numerical ; beehive weight in kg - tIn ; numerical ; temperature from a sensor located within the hive - tOut ; numerical ; temperature from a sensor located outside the hive
HYDROTHIEM observatory: pathogenic leptospirosa and hydrological data collected under SPIraL project, 2020-2023

[Lien vers la fiche source] The [SPIraL project] "Soils, rainfall and leptospirosis", funded by the French National Research Agency (ANR) partly took part in the HYDROTHIEM observatory (eastern tropical coast of New Caledonia, in the South West Pacific) where it was devoted to the relationships between hydrological variables and pathogen Leptospira concentration at the CAPT station, located at the outlet of a 3.1 km2 watershed. Details on the HYDROTHIEM observatory are given in Genthon et al., 2022, [doi:10.1016/j.ejrh.2022.101223] and a first set of hydrological data can be found in the [HYDROTHIEM dataset] in DataSuds repository. Additional hydrological data, starting from Feb. 2021 as well pathogen Leptospira concentrations measured at the CAPT station are provided here.
Suitability map for peste des petits ruminants outbreaks in the Union of the Comoros

[Lien vers la fiche source] Peste des petits ruminants virus (PPRV), responsible for peste des petits ruminants (PPR), is widely circulating in Africa and Asia. A Geographic Information System-based Multicriteria Evaluation was developed to map the areas suitable for PPR occurrence and spread in the Union of the Comoros. Factors associated with risk of PPR outbreaks in the Union of the Comoros were: goat density, sheep density, road density, proximity to water bodies, animal mobility index.
Output data from: Combining global tree cover loss data with historical national forest-cover maps to look at six decades of deforestation and forest fragmentation in Madagascar.

[Lien vers la fiche source] This dataset includes output data from the following article: Vieilledent G., C. Grinand, F. A. Rakotomalala, R. Ranaivosoa, J.-R. Rakotoarijaona, T. F. Allnutt, and F. Achard. 2018. Combining global tree cover loss data with historical national forest-cover maps to look at six decades of deforestation and forest fragmentation in Madagascar. Biological Conservation. 222: 189-197. [doi:[10.1016/j.biocon.2018.04.008]]. [bioRxiv: 147827]. Results from this article have been updated for the periods 2010-2015 and 2015-2017 (update_2017.pdf). This repository includes Madagascar forest cover (forXXXX‧tif), forest density (fordensXXXX‧tif), distance to forest edge (dist_edge_XXXX‧tif) and forest fragmentation index (fragXXXX‧tif) for the years 1953, 1973, 1990, 2000, 2005, 2010, 2015 and 2017. Data are available as GeoTIFF raster files at 30m resolution in the UTM 38S projection (EPSG:32738).
Maps of central African rainforest composition and vulnerability

[Lien vers la fiche source] This is a dataset repository for the manuscript: Réjou-Méchain, M., Mortier, F., Bastin, J.-F., Cornu G., Barbier, N., Bayol, N., Bénédet, F., Bry, X., Dauby, G., Deblauwe, V., Doucet, J.-L., Doumenge, C., Fayolle, A., Garcia, C., Kibambe, J.-P., Loumeto, J.-J., Ngomanda, A., Ploton, P., Sonké, B., Trottier, C., Vimal, R., Yongo, O., Pélissier, R., Gourlet-Fleury, S. 2021. Unveiling African rainforest composition and vulnerability to global change. Nature.[https://doi.org/10.1038/s41586-021-03483-6]
Map of soil texture class (USDA system) for Africa at 0-20cm depth, adapted from iSDAsoil for use in SARRA-O crop model

[Lien vers la fiche source] This raster map is adapted from "iSDAsoil: soil texture class (USDA system) for Africa predicted at 30 m resolution at 0-20 and 20-50 cm depths" v0.13 (doi:[10.5281/zenodo.4094616]) for use in SARRA-O crop model. It was obtained by first performing raster alignment with the TAMSAT v3.1 precipitation product (https://www.tamsat.org.uk), through upscaling of the original 30m resolution to 0.0375° (approximatively 4 km). Mode was used as aggregation function, so that pixels in the obtained raster represent the main soil class in the extent of the newly computed pixels. Then, no-class value was updated from 255 to 0. Finally, class identifiers were updated by applying a factor 1E6 to obtain 7 to 8-digit encoding needed by SARRA-O crop model (example : class 8 will be encoded as 8000000, class 12 as 12000000).
Data for: "The Dark side of shade: How microclimates drive the epidemiological mechanisms of coffee berry disease"

[Lien vers la fiche source] Data of coffee berry disease (CBD) dynamics and of microclimates, collected over two consecutive years (2012-2013) on a smallholding coffee farm in Bamendjou in West Cameroon (5°24′0″N; 10°19′0″E, alt. 1600m), were used to assess the effect of shade and full sun on CBD epidemiological processes. For this purpose we developed a mechanistic SEIR model, and we inferred, within a Bayesian framework, the epidemiological parameters against microclimatic covariates. We computed the Bayesian joint posterior distribution for inference of parameters via a Markov chain Monte Carlo (MCMC) algorithm using JAGS software (Plummer, 2017) and the package MecaStat (Rey et al., 2018).
Simulations des rendements canniers de 2016 à 2100 sur l'île de La Réunion avec le modèle Mosicas

[Lien vers la fiche source] Cette étude évalue les prédictions de rendement de canne à sucre sur l’ensemble des surfaces de canne à sucre de l’île de La Réunion sur la période couvrant 2015 à 2100, suivant trois scénarios de changement climatique (réchauffement limité à 2, 3 ou 6°C). Les projection climatiques journalières du climat utilisées sont issues du projet BRIO (Building Resilience in Indian Ocean) conduit par Météo France. Le modèle de croissance de la canne à sucre MOSICAS a été appliqué pour estimer les rendements en tige usinable fraîche et les besoins en eau d’irrigation en tenant compte des projections climatiques (rayonnement, température, évapotranspiration et précipitation) et de différents scénarios d’irrigation.
5 minutes rainfall in Abidjan district (Côte d'Ivoire) (2015-)

[Lien vers la fiche source] 5-minutes rainfall from 21 pluviographs located in the District of Abidjan (Ivory Coast) The rain is recorded with tipping buckets rain gauge (tilting of the bucket for 0.5mm) Précis Mécanique® (rain interception cone 1.5m from the ground and with an area equal to 400 cm2). Tipping bucket dates (day month year hour minute second) are recorded in a HOBO Pendant® UA-003-64 data logger. The rain gauge data are collected monthly. During this visit, the devices are cleaned and the tipping volume of the buckets is checked. From 2015 to 2018, 6 pluviographs were installed to assess the rainfall in the Aghien lagoon and its watersheds (Djibi and Bété basins) as part of the project “[The Aghien lagoon a sustainable source of drinking water for the city of Abidjan? ] (2015-2018) ”. From 2018 to early 2019, 15 other pluviographs were installed in the city of Abidjan as part of the project [EVIdENCE] "Extreme rain events, vulnerability to flooding and water contamination (2018-2021).
SPOT6 satellite imagery, land cover and land use classification of 5 areas in the South Province of New Caledonia

[Lien vers la fiche source] 5 areas of New Caledonia covered by the [SPOT6 satellite] are available at 1.5 meters resolution (RGB + PIR), totaling 128,4 km². These 5 areas have been manually segmented and then classified by photo-interpretation according to two types of classification: (i) classification of the bio-geophysical land cover, containing 6 different classes (buildings, bare soil, forest, low-density vegetation; water bodies, Shadows and Clouds); (ii) classification of the land use divided into 15 distinct classes. Two levels of hierarchy have been established. The first level separates four classes: the urban fabric, the natural formation, the wetlands and the shadows and clouds. The second level is described in the file "NC_NomLU.png". The SPOT6 data, recorded in the course of 2013-2014, have been radiometrically corrected and assembled into a mosaic. The data were provided as ortho-rectified tiles based on the local authorities' 10-meter DTM and projected according to the reference coordinate system RGCN91-93 / Lambert New Caledonia (EPSG:3163). Results are provided as a [GeoTIFF] file for each area. The goal of this dataset, is to prepare the set-up of an operational system for land use and land cover monitoring for the South Province territory of New Caledonia.
Zones de production maraichères et fruitières à La Réunion (2021)

[Lien vers la fiche source] Cette étude réalisée en 2021 s’inscrit dans le cadre d’un projet de recherche portant sur l’autonomie alimentaire-énergétique de La Réunion porté par l’ADEME, le CIRAD et l’Université de La Réunion visant à simuler l’évolution d’indicateurs d’autonomie alimentaire-énergétique, en lien avec l’usage des sols, selon plusieurs scénarios à l’échelle du territoire. Cette modélisation s’appuie notamment sur la connaissance des rendements et des besoins pour plusieurs types de cultures. Dans le cas des cultures fruitières et maraîchères, il existe un manque voire une absence de données concernant la répartition spatiale des surfaces, leur superficie et sur les consommations en intrants et les rendements de ces cultures. Cette étude vise donc à affiner la connaissance sur la production horticole alimentaire. A partir de données de répartition des cultures (Recensement agricole de 2011), largement corrigées et approfondies à dire d’experts, des zones de production maraîchères et fruitières ont été cartographiées au sein desquelles les cultures majoritaires en termes d’occupation du sol ont été identifiées. Ces deux cartes ont fait l’objet d’une validation par les experts (une carte pour le maraichage et une carte pour les cultures fruitières). Les consommations en azote ainsi que les rendements des cultures fruitières et maraîchères ont été estimés pour un hectare cultivé moyen dans chaque zone de production maraichère ou fruitière, en tenant compte des espèces cultivées majoritaires présentes. Les consommations en azote correspondent à des apports recommandés (kg/an), d'après littérature et à dire d'experts, en fonction des espèces cultivées. Les rendements sont des moyennes des espèces majoritairement cultivées dans chaque zone. Pour chaque espèce, les rendements moyens sont tirés de la littérature (contexte local ou tropical de préférence). Carte des zones de productions maraichères disponible en téléchargement sur : https://aware.cirad.fr/layers/geonode:zones_production_maraichage0 Carte des zones de productions fruitières disponible en téléchargement sur : https://aware.cirad.fr/layers/geonode:zones_production_arbo1
Pesticide itineraries and active substance databases, Guadeloupe

[Lien vers la fiche source] To study the impact of pesticide uses in agriculture on human health, data were collected to represent the spatial dynamics of pesticide uses over time: i) a database of agricultural practices regarding the use of pesticides and their evolution over 50 years for the main three groups of crops in Guadeloupe: banana, sugar cane and market gardening; ii) a database of available active substances according to time. Pour étudier l'impact de l'utilisation des pesticides en agriculture sur la santé humaine, des données ont été collectées pour représenter la dynamique spatiale des utilisations de pesticides dans le temps : i) une base de données des pratiques agricoles concernant l'utilisation des pesticides et leur évolution sur 50 ans pour les trois principaux groupes de cultures en Guadeloupe : la banane, la canne à sucre et le maraîchage ; ii) une base de données des substances actives disponibles en fonction du temps.
Experimental dataset on sustainable durum wheat production in Greece 2018 to 2020

[Lien vers la fiche source] Durum wheat dataset collected on HAO-DEMETER research station in Thessaloniki, Greece from 2018 to 2020. The experiment was set up to study 2 agronomic factors: 4 cultivars, 2 levels of fertilization. The dataset includes phenology, morphology, leaf area index, biomass, yield components. Funds : Project ANR ARIMNet2 TomorrowS
Dataset on Websites’ User-Stories and the exploration of their the 3-Dimensional Variability using Triadic Concept Analysis

[Lien vers la fiche source] The diffusion of knowledge, extracted from the Knomana knowledge base (Silvie et al., 2021) or inferred using Knomana, requires to develop a specific application for each type of final user (e.g. researcher vs. farmer). This involves to develop a family of similar applications, which can be done thanks to the paradigm of software product line. A challenge is to identify, analyze and structure the functionalities required by each user before the development of such applications. The considered solution is to analyze the variability of software systems similar to the ones we plane to develop.
Portion sizes in women of childbearing age and young children in Ouagadougou (Burkina Faso) using a food photography atlas and salted replicas

[Lien vers la fiche source] This study was aimed to compare the accuracy and precision of portion estimation with a food atlas and with salted replicas relative to weighed records (the reference). The food portion photography atlas had been developed prior to this data collection with age-appropriate portion sizes for 11 foods frequently consumed by children (sizes for 6-11-month- and for 12-23-month-old children) and women of childbearing age in Ouagadougou, the capital of Burkina Faso. Our data were collected through a survey in 2021 on a sample of 67 women with their children, 35 aged 12-23 months and 33 aged 6-11 months. The provided dataset contains estimates of portion sizes of food consumed the previous day by the participants using two different estimation tools. Data records were anonymized by removing direct and indirect identifiers. The analysis of the data collected resulted in the published article "Estimation of food portion sizes in women of childbearing age and young children in Ouagadougou (Burkina Faso) using a food photography atlas and salted replicas: comparison with weighed records". The detailed protocol of the study was approved by an ethics committee in Burkina Faso, the Ethics Committee of the Research Institute in Health Science (N° 29-2019/CEIRES). After explaining the study purpose and implementation to the participants, and giving them an information note, we asked them to sign an informed consent form.
Marine mammal stranding data of New Caledonia: Province Sud (1940-2022)

[Lien vers la fiche source] This dataverse contains all the information relating to each stranding of marine mammals listed in the Southern Province of New Caledonia since the 1980s: - stranding files - autopsy report - notes / comments - photos - newspaper articles Since 1991,we attempted to collect information on all stranding events occurring in New Caledonian waters. When examination of the carcass was possible, data were collected following guidelines set up by the French national stranding network, depending on the degree of decay. We recommended at least noting the date, the precise location of the stranding (with geographical coordinates if possible), the state of decomposition of the carcass, the presence of scars that may indicate human interac- tion, the total length of the animal in order to estimate its age-class, photographs, and collection of a skin sample. When possible, teeth, stomach contents, parasites, and tissues (e.g. skin, muscle, liver, kidney) were collected and complete morphological measurements were made. If a veterinarian was available, a necropsy was performed. These data are made available to the French National Stranding Network (RNE: https://www.observatoire-pelagis.cnrs.fr/echouages/reseau-national-echouage/) Ce dataverse contient toutes les informations relatives à chaque échouage de mammifères marins répertorié en Province Sud de Nouvelle-Calédonie depuis les années 1980 : - fiches d'échouage - comptes rendu d'autopsie - notes / commentaires - photos - articles de journaux.
Marine mammal stranding data of New Caledonia: Province Nord (1989-2022)

[Lien vers la fiche source] This dataverse contains all the information relating to each stranding of marine mammals listed in the Northern Province of New Caledonia since the 1980s: - stranding files - autopsy report - notes / comments - photos - newspaper articles. Since 1991,we attempted to collect information on all stranding events occurring in New Caledonian waters. When examination of the carcass was possible, data were collected following guidelines set up by the French national stranding network, depending on the degree of decay. We recommended at least noting the date, the precise location of the stranding (with geographical coordinates if possible), the state of decomposition of the carcass, the presence of scars that may indicate human interac- tion, the total length of the animal in order to estimate its age-class, photographs, and collection of a skin sample. When possible, teeth, stomach contents, parasites, and tissues (e.g. skin, muscle, liver, kidney) were collected and complete morphological measurements were made. If a veterinarian was available, a necropsy was performed. These data are made available to the French National Stranding Network (RNE: https://www.observatoire-pelagis.cnrs.fr/echouages/reseau-national-echouage/) Ce dataverse contient toutes les informations relatives à chaque échouage de mammifères marins répertorié en Province Nord de Nouvelle-Calédonie depuis les années 1980 : - fiches d'échouage - comptes rendu d'autopsie - notes / commentaires - photos - articles de journaux.
Marine mammal stranding data of New Caledonia: Province Iles (1977-2022)

[Lien vers la fiche source] This dataverse contains all the information relating to each stranding of marine mammals listed in the Loyalty Island Province of New Caledonia since the 1980s: - stranding files - autopsy report - notes / comments - photos - newspaper articles. Since 1991,we attempted to collect information on all stranding events occurring in New Caledonian waters. When examination of the carcass was possible, data were collected following guidelines set up by the French national stranding network, depending on the degree of decay. We recommended at least noting the date, the precise location of the stranding (with geographical coordinates if possible), the state of decomposition of the carcass, the presence of scars that may indicate human interac- tion, the total length of the animal in order to estimate its age-class, photographs, and collection of a skin sample. When possible, teeth, stomach contents, parasites, and tissues (e.g. skin, muscle, liver, kidney) were collected and complete morphological measurements were made. If a veterinarian was available, a necropsy was performed. These data are made available to the French National Stranding Network (RNE: https://www.observatoire-pelagis.cnrs.fr/echouages/reseau-national-echouage/) Ce dataverse contient toutes les informations relatives à chaque échouage de mammifères marins répertorié en Province Iles Loyauté de Nouvelle-Calédonie depuis les années 1980 : - fiches d'échouage - comptes rendu d'autopsie - notes / commentaires - photos - articles de journaux.
REACT project (Burkina Faso and Côte d'Ivoire, 2016-2018): study sites information

[Lien vers la fiche source] This dataset lists the villages involved in the REACT project (Insecticide resistance management in Burkina Faso and Côte d'Ivoire: research on vector control strategies). Led by three scientific institutions – the Institut de Recherche pour le Développement (IRD, France), the Institut de Recherche en Science de la Santé (IRSS, Burkina Faso), and the Institut Pierre Richet (IPR, Côte d'Ivoire) – between 2016 ans 2018, the REACT project aimed to assess whether the addition of complementary vector control strategies to long-lasting insecticidal nets reduces malaria transmission and provides additional protection against malaria in rural areas with a high level of insecticide-resistant vectors. The aforementioned areas were those of Diébougou, southwestern Burkina Faso and Korhogo, northern Côte d'Ivoire. Towards this aim, several villages were selected in each area (27 in the Diébougou area and 28 in the Korhogo area) at the beginning of the project according to the following criteria: accessibility during the rainy season, 200 to 500 inhabitants per village, and distance between villages greater than 2 km. Various data (entomological, epidemiological, human behavioural, etc.) were then collected in these villages during the 2 years-long field phase of the project. This dataset lists the villages involved in the project and provides a set of useful information for each of them: geographic coordinates, population, type of vector control intervention deployed in the context of the project, name of the health center the village is depending on, and distance (euclidian and real) to such health center. This information may be useful for future use of the data that were collected in these villages during the project and subsequently opened (see metadata for the references of the main datasets).
Innovative and Rapid Access to Points of Care to Optimise the Care of Newborns and Infants Exposed to HIV in Conakry, Guinea (2020-2021)

[Lien vers la fiche source] In Conakry, Guinea, like many other African capitals, traffic congestion is a major obstacle to transporting blood samples from peripheral health centres to laboratories where tests are centralised. This situation complicates early HIV testing of HIV- exposed children (i.e., born to HIV-positive mothers), even though the World Health Organization recommends treating HIV-infected children before the age of two months to reduce mortality. The use of drones, which has proved effective in many countries for rapidly transporting healthcare products and reaching isolated areas, could help to resolve these difficulties and improve early detection. A pilot study was conducted from 2020–2021 to assess the feasibility, cost-effectiveness and acceptability of such a strategy. The pilot study had an anthropological component on the acceptability and perception of using drones to optimise the transport of blood samples in Conakry.
Participatory Processing Data on Pounded Yam generated by Bowen University in Nigeria

[Lien vers la fiche source] This dataset contains data generated during the Activity 4 or Step 3 - Participatory Processing Diagnosis and Quality Characteristics performed by the Bowen University team in Nigeria on Pounded Yam, within the RTBfoods project (following the [Methodological Guidance]). This dataset may contain diverse types of anonymized data (e‧g. questionnaires, processing parameters, cleaned and processed data) which is to be available on open access following a 2-years embargo after the end of the RTBfoods project (embargo ending date: 15 March 2025) This dataset may also contain non-anonymized data (e‧g. raw data, consent forms signed by interviewees) which cannot be made publicly available, at any time; non-anonymized data is contained in the .tar‧gz file. For more information about the content of the .tar‧gz file, you are invited to contact the authors mentioned in the metadata.