AndreaBozzo/ceres-open-data-index huggingface dataset:
Commercial catches sampling program in the Estuary and Gulf of St. Lawrence – American lobster (Homarus americanus)

Summary
The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities.

Data
This dataset on the American lobster (Homarus americanus) includes the metadata, sample weight, cephalothorax length, sex and the number of specimens measured. This dataset covers the periods of 1998 and 2000 to present. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Commercial catches sampling program in the Estuary and Gulf of St. Lawrence – Greenland halibut (Reinhardtius hippoglossoides)

Summary
The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities.

Data
This dataset on Greenland halibut (Reinhardtius hippoglossoides) includes the metadata, sample weight, fish length, the sex and the number of specimens measured. This dataset covers the period of 1987 to present. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Vessel Density Mapping of 2023 Automatic Identification System (AIS) Data in the Northwest Atlantic

The Automatic Identification System (AIS) is a global, satellite-based and terrestrial-based ship tracking system that uses shipborne equipment to remotely track vessel identification and positional information and is typically required on vessels of 300 gross tonnage or more on an international voyage, of 500 gross tonnage or more not on an international voyage, and passenger ships of all sizes. AIS tracking technologies are primarily used in support of real-time maritime domain awareness and for maritime security and safety of life at sea. This report describes a geographic information system (GIS) analysis of 2019 AIS data to produce yearly and monthly vessel density maps of all vessel classes combined and yearly density maps of each vessel class. The year 2019 was selected to portray shipping densities in a pre-COVID 19 pandemic depiction of the maritime transport sector in the Northwest Atlantic. Vessel density map applications include use in spatial analysis and decision support for marine spatial planning. In 2023 the process was applied to the years 2013 through to 2022 and were made available using the same processes that were applied to the original 2019 datasets.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - Wagmatcook 2007

Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - Wagmatcook 2007  data is part of the publication Bay Scale Assessment of Nearshore Habitat Bras d'Or Lakes. 

A history of nearshore benthic surveys of Bras d’Or Lake from 2005 – 2011 is presented. 

Early work utilized drop camera and fixed mount sidescan. The next phase was one of towfish development, where camera and sidescan were placed on one platform with transponder-based positioning. From 2009 to 2011 the new towfish was used to ground truth an echosounder. The surveys were performed primarily in the northern half of the lake; from 10 m depth right into the shallows at less than 1 m. Different shorelines could be distinguished from others based upon the relative proportions of substrate types and macrophyte canopy. The vast majority of macrophytes occurred within the first 3 m of depth. This zone was dominated by a thin but consistent cover of eelgrass (Zostera marina L.) on almost all shores with a current or wave regime conducive to the growth of this plant. However, the eelgrass beds were frequently in poor shape and the negative impacts of commonly occurring water column turbidity, siltation, or possible localized eutrophication, are suspected. All survey data were placed into a Geographic Information System, and this document is a guide to that package. The Geographic Information System could be used to answer management questions such as the placement and character of habitat compensation projects, the selection of nearshore protected areas or as a baseline to determine long term changes.

Vandermeulen, H. 2016. Video-sidescan and echosounder surveys of nearshore Bras d’Or Lake. Can. Tech. Rep. Fish. Aquat. Sci. 3183: viii + 39 p.


Cite this data as: Vandermeulen H. Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - Wagmatcook 2007. Published May 2022. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Gulf of St. Lawrence observer at sea program

The Gulf of St. Lawrence At-Sea Observer Program is part of the Fisheries Monitoring Policy of the Department of Fisheries and Oceans Canada (DFO) (https://www.dfo-mpo.gc.ca/reports-rapports/regs/sff-cpd/fishery-monitoring-surveillance-des-peches-eng.htm#toc13). Its purpose is to ensure accurate verification of fishing activities at sea by an independent third party, and to provide DFO with scientific data on catches. The fishing industry and DFO depend on the proper communication of this information for fisheries management, monitoring and scientific research activities.

Biological data on fish and marine invertebrates collected by the At-Sea Observer Program is one of the sources of information used by DFO to assess the status of these resources. Biological data protocols are the subject of an annual consultation with the biologists responsible for assessing each of the exploited stocks.

This dataset contains the sum of weight data for species caught, by NAFO (Northwest Atlantic Fisheries Organization) sub-division and by year from 1999-2023, from commercial species directed fisheries for stock assessments in the Quebec region. It also includes length frequencies for species caught when required by protocol.

To preserve the confidentiality of the fishing industry, data are only presented when fishing activity has been observed on a minimum of 5 vessels in a given NAFO area. The data presented are raw and should be interpreted with caution. They may contain errors such as spatial coordinates, landing weights or inaccurate or unreliable species identifications. A brief review of the taxonomy was carried out by DFO taxonomist cited as collaborator. His comments can be found in the “REMARK_IDENT” column preceded by the code “Claude_Nozere”.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Presence of the Thorny Skate in the Estuary and Gulf of St. Lawrence

Spatial distribution of the Thorny Skate presence expressed by catch weight based on the annual Department of Fisheries and Oceans (DFO) groundfish research surveys realised between 2004 and 2010.

Catch data (kg/nautical mile) were aggregated by 100 km² cells. They are derived from processed data used for the production of: Chouinard, P-M., J-D. Dutil, S. Proulx, D. Borcard and J. Crocker. 2014. A spatial approach to matching marine fish diversity and abundance with habitat features. Hydrobiologia. Volume 734, Issue 1: 39-55.

Associated publication: Dutil, J.-D., Proulx, S., Chouinard, P.-M., and Borcard, D. 2011. A hierarchical classification of the seabed based on physiographic and oceanographic features in the St. Lawrence. Can. Tech. Rep. Fish. Aquat. Sci. 2916: vii + 72 pages.

Purpose

Since 1990, the Department of Fisheries and Oceans has been conducting an annual multidisciplinary survey in the Estuary and northern Gulf of St. Lawrence using a standardized protocol. In the southern Gulf of St. Lawrence, these bottom trawl surveys has been carrying out each September since 1971. These missions are an important source of information about the status of the marine ressources.

The objectives of the surveys are multiple: 
to estimate the abundance and biomass of groundfish and invertebrates, to identify the spatial distribution and biological characteristics of these species, to monitor the biodiversity of the Estuary and Gulf and finally, to describe the environmental conditions observed in the area at the moment of the sampling.

The southern Gulf surveys are realized using the following standardized protocol:
Hurlbut,T. and D.Clay (eds) 1990. Protocols for Research Vessel Cruises within the Gulf Region (Demersal Fish) (1970-1987). Can. MS Rep. Fish. Aquat. Sci. No. 2082: 143p.

The sampling protocols used for the Estuary and northern Gulf surveys are described in details in the following publications:

Bourdages, H., Archambault, D., Bernier, B., Fréchet, A., Gauthier, J., Grégoire, F., Lambert, J., et Savard, L. 2010. Résultats préliminaires du relevé multidisciplinaire de poissons de fond et de crevette d’août 2009 dans le nord du golfe du Saint-Laurent. Rapp. stat. can. sci. halieut. aquat. 1226 : xii+ 72 p. 

Bourdages, H., Archambault, D., Morin, B., Fréchet, A., Savard, L., Grégoire, F., et Bérubé, M. 2003. Résultats préliminaires du relevé multidisciplinaire de poissons de fond et de crevette d’août 2003 dans le nord du golfe du Saint-Laurent. Secr. can. consult. sci. du MPO. Doc. rech. 2003/078. vi + 68 p.

Annual reports are available at the Canadian Science Advisory Secretariat (CSAS), (http://www.dfo-mpo.gc.ca/csas-sccs/index-eng.htm).

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Estimates of anthropogenic nitrogen loading and eutrophication indicators for the Bay of Fundy and Scotian Shelf

The excessive input of nitrogen derived from human land-use activities remains a major cause of the eutrophication of coastal ecosystems around the world. However, little data exist on rates of nutrient pollution or its potential impacts to coastal ecosystems in Atlantic Canada. To fill this knowledge gap, a Nitrogen Loading Model (NLM) framework was applied to determine the Total Nitrogen Load (kg TN / yr) from point and non-point source inputs (wastewater, atmospheric deposition, land use, fertilizer applications, and regional industries) in 109 coastal watersheds bordering the Bay of Fundy and Scotian Shelf. To evaluate the potential impact of nitrogen loading, two indicators were calculated for 40 coastal embayments: (1) ∆N, a measure of nitrogen residency that predicts dissolved oxygen problems; and (2) the estuary loading rate, a predictor of the potential for loss of submerged aquatic vegetation. This project was funded by Fisheries and Oceans Canada through a Strategic Program for Ecosystem-based Research and Advice (SPERA) grant. This research has been published in the scientific literature (Kelly et al. 2021). 
Kelly, N.E., Guijarro-Sabaniel, J. and Zimmerman, R., 2021. Anthropogenic nitrogen loading and risk of eutrophication in the coastal zone of Atlantic Canada. Estuarine, Coastal and Shelf Science, 263, p.107630. doi: https://doi.org/10.1016/j.ecss.2021.107630

Cite this data as: Kelly, N.E., Guijarro-Sabaniel, J. and Zimmerman, R. Data of: Estimates of anthropogenic nitrogen loading and eutrophication indicators for the Bay of Fundy and Scotian Shelf. Published: February 2022. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/08746031-1970-4bf6-b6d4-3de2715c8634

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Seasonal temperature climatology of the Canadian Pacific Exclusive Economic Zone from BCCM model (1981-2010)

Description:
Seasonal mean temperature from the British Columbia continental margin model (BCCM) were averaged over the 1981 to 2010 period to create seasonal mean climatology of the Canadian Pacific Exclusive Economic Zone. 

Methods:
Temperatures at up to forty-six linearly interpolated vertical levels from surface to 2400 m and at the sea bottom are included. Spring months were defined as April to June, summer months were defined as July to September, fall months were defined as October to December, and winter months were defined as January to March. The data available here contain raster layers of seasonal temperature climatology for the Canadian Pacific Exclusive Economic Zone at 3 km spatial resolution and 47 vertical levels.

Uncertainties:
Model results have been extensively evaluated against observations (e.g. altimetry, CTD and nutrient profiles, observed geostrophic currents), which showed the model can reproduce with reasonable accuracy the main oceanographic features of the region including salient features of the seasonal cycle and the vertical and cross-shore gradient of water properties. However, the model resolution is too coarse to allow for an adequate representation of inlets, nearshore areas, and the Strait of Georgia.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Department of National Defence Firing Practice and Exercise Areas, Atlantic Canada

The Department of National Defence has designated Firing Practice and Exercise Areas off the coasts of Canada.  Activities in these areas may include bombing practice from aircraft, air-to-air, air-to-sea or ground firing, and anti-aircraft firing, etc.  In Atlantic Canada, the Nova Scotia Area includes sea area employments for sub-surface operations and firing exercises (FIREX).  The Gulf of St. Lawrence Area, excluding the French territorial waters of Saint-Pierre et Miquelon, includes sea area employments for sub-surface operations and underwater demolition training. For full details, see the Notices to Mariners, Section F, National Defence Military Notices, available online: https://www.notmar.gc.ca/publications/annual-annuel/section-f/f35-en.pdf.

Legal Constraints: Users should be aware that the polygons depicting firing practice and exercise areas are intended for illustration only and should not be used for navigational or legal purposes.

Organization: National Defence | Défense nationale
Seasonal pH climatology of the Canadian Pacific Exclusive Economic Zone from BCCM model (1981-2010)

Description:
Seasonal mean pH from the British Columbia continental margin model (BCCM) were averaged over the 1981 to 2010 period to create seasonal mean climatology of the Canadian Pacific Exclusive Economic Zone. 

Methods:
The pH at up to forty-six linearly interpolated vertical levels from surface to 2400 m and at the sea bottom are included. Spring months were defined as April to June, summer months were defined as July to September, fall months were defined as October to December, and winter months were defined as January to March. The data available here contain raster layers of seasonal pH climatology for the Canadian Pacific Exclusive Economic Zone at 3 km spatial resolution and 47 vertical levels.

Uncertainties:
Model results have been extensively evaluated against observations (e.g. altimetry, CTD and nutrient profiles, observed geostrophic currents), which showed the model can reproduce with reasonable accuracy the main oceanographic features of the region including salient features of the seasonal cycle and the vertical and cross-shore gradient of water properties. However, the model resolution is too coarse to allow for an adequate representation of inlets, nearshore areas, and the Strait of Georgia.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Institute of Ocean Sciences Moored Instrument Data (Arctic), 1974-present

Moored instrument time series data include current velocity, temperature, salinity, oxygen, fluorescence, transmissivity, turbidity, and particle capture of carbon, nitrogen, and silicon.  Also included are sediment trap, ice drift and ice draft data.

These data were collected by researchers from the Institute of Ocean Sciences, Sidney, BC, from locations ranging from the Beaufort Sea, and across the Canadian Arctic Archipelago to Baffin Bay.

The data links below are only a representative sample of the entire collection.  If you require more data, please send your request to the data contact.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Monthly Currents Climatology of the Northwest Atlantic Ocean from BNAM model (1990-2015)

Monthly mean currents from Bedford Institute of Oceanography North Atlantic Model (BNAM) results were averaged  over 1990 to 2015 period to create monthly mean climatology for the Northwest Atlantic Ocean, which can be considered as a representation of the climatological state of the Northwest Atlantic Ocean.  The BNAM model is eddy-resolving,  NEMO-based ice-ocean coupled North Atlantic Ocean model developed at the Bedford Institute of Oceanography (BIO) to support DFO monitoring programs. The data available here is monthly climatology for eight selected depths (surface, 110 m, 156 m, 222 m, 318 m, 541 m, 1062 m, bottom) in 1/12 degree spatial resolution.  The data for each month from 1990 until present for the entire model domain ( 8°–75°N latitude and 100°W–30°E longitude) and various depths is available upon request.

The 1990-2017 model hindcast result is compared with observational data from surface drifter and satellite altimetry. The model demonstrates good skill in simulating surface currents, winter convection events in the Labrador Sea, and the Atlantic Meridional Overturning Circulation as observed at 26.5°N and 41°N. Model results have been used to interpret changes in the Labrador Current and observed warming events on the Scotian Shelf, and are reported through the annual AZMP Canadian Science Advisory Secretariat Process.

When using data please cite following:
Wang, Z., Lu, Y., Greenan, B., Brickman, D., and DeTracey, B., 2018. BNAM: An eddy resolving North Atlantic Ocean model to support ocean monitoring. Can. Tech. Rep. Hydrogr. Ocean. Sci. 327: vii + 18p

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Updated Species Distribution Models for Marine Invasive Species Hotspot Identification

Monitoring data from DFO invasive species monitoring programs, along with occurrence information from online databases and the scientific literature, have been paired with high resolution environmental data and oceanographic models in species distribution models that predict present-day and project future distributions of 24 non-indigenous species (NIS) on North America`s east coast, and 31 NIS on its west coast. Future distributions were predicted for 2100, under Representative Concentration Pathway 8.5 from the Intergovernmental Panel on Climate Change’s fifth Assessment Report. Present-day and future richness of these species (i.e., hotspots) have been estimated by summing the occurrence probabilities of NIS. This data set includes the present-day and year 2100 species distribution modeling results for each species, and the estimated species richness.

Cite this data as: Lyons DA., Lowen JB, Therriault TW., Brickman D., Guo L., Moore AM., Peña MA., Wang Z., DiBacco C. Data of: Updated species distribution models for marine invasive species hotspot identification. Published: November 2023. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/1439dcb3-82a6-40fd-a9a4-8f045b20ff5b

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Electrofishing Data from the Miramichi River, New Brunswick (SFA 16)

PURPOSE:
To track juvenile Atlantic salmon densities.

DESCRIPTION:
Indices of freshwater production are derived annually from electrofishing surveys in the Miramichi River of New Brunswick. Juvenile salmon abundances at sites, in terms of number of fish per habitat area sampled by age or size group (densities), are obtained using successive removal sampling or catch per unit effort sampling calibrated to densities. Sampling intensities vary among years and among rivers.
            
PARAMETERS COLLECTED:
Species counts (ecological); point (spatial).

USE LIMITATION:
To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Vessel Density Mapping of 2017 AIS Data in the Northwest Atlantic

The Automatic Identification System (AIS) is a global, satellite-based and terrestrial-based ship tracking system that uses shipborne equipment to remotely track vessel identification and positional information and is typically required on vessels of 300 gross tonnage or more on an international voyage, of 500 gross tonnage or more not on an international voyage, and passenger ships of all sizes. AIS tracking technologies are primarily used in support of real-time maritime domain awareness and for maritime security and safety of life at sea. This report describes a geographic information system (GIS) analysis of 2019 AIS data to produce yearly and monthly vessel density maps of all vessel classes combined and yearly density maps of each vessel class. The year 2019 was selected to portray shipping densities in a pre-COVID 19 pandemic depiction of the maritime transport sector in the Northwest Atlantic. Vessel density map applications include use in spatial analysis and decision support for marine spatial planning. In 2023 the process was applied to the years 2013 through to 2022 and were made available using the same processes that were applied to the original 2019 datasets.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada