AndreaBozzo/ceres-open-data-index huggingface dataset:
Commercial catches sampling program in the Estuary and Gulf of St. Lawrence – white hake (Urophycis tenuis)

Summary
The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities.

Data
This dataset on the white hake (Urophycis tenuis) includes the metadata, sample weight, fish length, the sex and the number of specimens measured. This dataset covers the periods of 1989-1990 and 1992-1993. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Killer whale range expansion and extended seasonal presence in the eastern Canadian Arctic, 2002-2023

PURPOSE:
The focus of this research is on changes in the distribution of killer whales in the Canadian Arctic, which is within the field of marine biogeography and marine megafauna. Our research details change in killer whale presence and ties it to changes in sea ice coverage. These are novel results, presenting trends in the arrival and departure dates of killer whales into the eastern Canadian Arctic for the first time. We go on to discuss the impacts of these changes on other aspects of Arctic ecosystems and how increasing in killer whale presence might affect other species and the management of those species in Canada. Killer whales are a widespread species of interest, especially in the Canadian Arctic as their presence is tied to multiple aspects of a region rapidly changing from the effects of climate change.
            

DESCRIPTION:
This study examines 20 years of killer whale (Orcinus orca) sightings in the eastern Canadian Arctic, drawing from a comprehensive sighting database spanning 1850-2023. Despite inherent biases favoring data collection near communities and coastal areas, spatiotemporal analyses reveal significant shifts in killer whale distribution linked to changing sea ice conditions. We developed a clustering metric representing the mean distance to the five nearest sightings and results show that killer whales are progressively moving away from historically high-use areas and that sighting locations are becoming more dispersed over time. A significant year × sea ice interaction indicates observations occur earlier during their arrival period at lower sea ice concentrations over time, suggesting that declining sea ice
concentration contributes to earlier arrival. Conversely, for departure periods, killer whales are observed farther south later in the year, likely linked to earlier freeze-up at higher latitudes, and are overall observed later into the year over time. This trend has led to a near doubling of their average presence from 26 days in 2002 to 48 days in 2023 (27 July to 13 September) reflecting an extended open-water season. These findings underscore the prolonged seasonal use of Arctic regions by killer whales, driven by diminishing sea ice and expanding openwater habitat. Such shifts highlight potential implications for Arctic marine ecosystems as killer whales increasingly overlap with endemic species.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Critical habitat of the St. Lawrence estuary population of Striped Bass

Striped Bass critical habitat (St. Lawrence estuary population) defined by the analysis of available knowledge in 2011 and a scientific advice.

Purpose

The status of the Striped Bass population of the St. Lawrence Estuary is in constant evolution. It went from indigenous population until the end of 1960 to designated extirpated in Canada under the Species at Risk Act (SARA) in 2011.

Still in 2011, the status of the population of the St. Lawrence Estuary was reassessed by the Committee on the Status of Endangered Wildlife in Canada (COSEWIC) following the Ministère des Ressources naturelles et de la Faune du Québec re-introduction efforts and was designated endangered (COSEWIC 2012). Under SARA, critical habitat must be designated for all threatened, endangered or extirpated species.

Additional Information

The analysis of available knowledge on habitat quality assessment and its use by the Striped Bass was realized using two research documents: Pelletier et al. (2010) and Robitaille (2010). These documents were then reviewed during a scientific peer review meeting in April 2010. A Recovery Strategy was also established in 2011.

Pelletier, A.-M., G. Verrault, G. Bourget and J. Dussureault. 2010. Utilisation de l’habitat par les différents stades de développement de la population réintroduite de bars rayés (Morone saxatilis) de l’estuaire du Saint-Laurent. Ministère des Ressources naturelles et de la Faune du Québec, Direction de l’Expertise Faune-Forêt-Territoire du Bas-Saint-Laurent. 50 p.

Robitaille, J. 2010. Assessment of Habitat Quality and Habitat Use by the Extirped Striped Bass Population (Morone saxatilis) of St. Lawrence Estuary, Quebec DFO Canadian Science Advisory Secretariat. Research Document. 2010/052. 22 p.

DFO. 2011. Assessment of Habitat Quality and Habitat Use by the Striped Bass (Morone saxatilis) Population of the St. Lawrence Estuary, Quebec. DFO Can. Sci. Advis. Sec. Sci. Advis. Rep. 2010/069.

DFO. 2011. Robitaille, J., M. Bérubé, A. Gosselin, M. Baril, J. Beauchamp, J. Boucher, S. Dionne, M. Legault, Y. Mailhot, B. Ouellet, P. Sirois, S. Tremblay G. Trencia, G. Verreault and D. Villeneuve. 2011. Recovery Strategy for the Striped Bass (Morone saxatilis), St. Lawrence Estuary Population, Canada. Species at Risk Act Recovery Strategy Series. Ottawa : Fisheries and Oceans Canada. xi + 51 p.

The available information on habitat used and frequented by the St. Lawrence Estuary striped bass population has been reviewed later than 2011 and can be consulted at:
https://open.canada.ca/data/en/dataset/db177a8c-5d7d-49eb-8290-31e6a45d786c

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Coastal and epipelagic habitats of the St. Lawrence Estuary and Gulf - Database

A geospatial database involving 130 descriptors was created describing the pelagic and benthic habitats of the 0–30 m surface layer in the estuary and Gulf of St. Lawrence.

A grid made of 6.25 km² cells (2.5 x 2.5 km) was used to aggregate the data. Each of the 39,337 cells overlapping the marine environment was characterized using landscape, hydrographic, and oceanographic parameters determined from observations (including satellite imagery), a 3D circulation model, and published and unpublished material available at local and regional scales.

Purpose

The dataset provides useful information on the spatial extent of major coastal epipelagic habitats in the study area and can be used for mapping purposes and for analyses of species-habitat relationships.

Additional Information

The low tide limit was taken as the upper (0 m) boundary, but neighbouring landscape features, such as the proximity to freshwater inflows, surface area of the tidal zone, and characteristics of the shoreline, were also taken into consideration.

Also, each cell was classified as being marine, intertidal, or terrestrial using the high and low tide marks. Those marks were determined using NRCan CANVEC topographic map products (1:50,000). The high tide mark was determined as the limit between the land and water layers. The low tide mark (0 m depth) was determined as the lower limit of the tidal zone in areas with a tidal zone, and as the limit between the land and water layers elsewhere.

See the report mentioned below for a more detailed description of the treatments for each variable:

Dutil, J.-D., S. Proulx, P. Galbraith, J. Chassé and N. Lambert 2012. Coastal and epipelagic habitats of the St. Lawrence estuary and Gulf. Can. Tech. Rep. Fish. Aquat. Sci. 3009 : ix +87 pp.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Pelagic Shark Satellite Tag data - White Shark

The white shark (Carcharodon carcharias),  is a species found in Atlantic Canadian waters which is encountered in commercial and recreational fisheries. Pop-up Satellite Archival Tags (PSAT) from Wildlife Computers were applied to white sharks from 2016 to the present to collect data on depth (pressure), temperature and ambient light level (for position estimation). Deployments were conducted in Canada and the United States (Cape Cod and South Carolina) on scientific charters, typically in summer. Tag models deployed included: Mk10 (N=1), and MiniPAT (N=29) and 22 of 27 tags reported with 3 still at liberty. One individual shark returned to the location of tagging 1 year later and the physical tag was recovered. Another tag was recovered 5 years after deployment. White sharks tagged ranged in size from 259 cm to 459 cm Total Length (curved) estimated; 15 were female, 13 were male, and 2 were of unknown sex. Time at liberty ranged from 48 – 377 days and to date, only 3 tags remained on the shark for the programmed duration. Tagging of white sharks is an ongoing study and data will be updated here when it becomes available. Raw data transmitted from the PSAT’s after release was processed through Wildlife Computers software (GPE3) to get summary files, assuming a maximum swimming speed of 2m/s, NOAA OI SST V2 High Resolution data set for SST reference and ETOPO1-Bedrock dataset for bathymetry reference. The maximum likelihood position estimates are available in .csv and .kmz format and depth and temperature profiles are also in .csv format. Other tag outputs as well as metadata from the deployments can be obtained upon request from: warren.joyce@dfo-mpo.gc.ca or heather.bowlby@dfo-mpo.gc.ca.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Coral and Sponge Concentrations in the Eastern Arctic Region of Canada

Concentrations of sea pens, small and large gorgonian corals and sponges on the east coast of Canada have been identified through spatial analysis of research vessel survey by-catch data following an approach used by the Northwest Atlantic Fisheries Organization (NAFO) in the Regulatory Area (NRA) on Flemish Cap and southeast Grand Banks. Kernel density analysis was used to identify high concentrations. These analyses were performed for each of the five biogeographic zones of eastern Canada. The largest sea pen fields were found in the Laurentian Channel as it cuts through the Gulf of St. Lawrence, while large gorgonian coral forests were found in the Eastern Arctic and on the northern Labrador continental slope. Large ball-shaped Geodia spp. sponges were located along the continental slopes north of the Grand Banks, while on the Scotian Shelf a unique population of the large barrel-shaped sponge Vazella pourtalesi was identified. The latitude and longitude marking the positions of all tows which form these and other dense aggregations are provided along with the positions of all tows which captured black coral, a non-aggregating taxon which is long-lived and vulnerable to fishing pressures.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - Whycocomagh 2007

Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - Whycocomagh 2007  data is part of the publication Bay Scale Assessment of Nearshore Habitat Bras d'Or Lakes. 

A history of nearshore benthic surveys of Bras d’Or Lake from 2005 – 2011 is presented. 

Early work utilized drop camera and fixed mount sidescan. The next phase was one of towfish development, where camera and sidescan were placed on one platform with transponder-based positioning. From 2009 to 2011 the new towfish was used to ground truth an echosounder. The surveys were performed primarily in the northern half of the lake; from 10 m depth right into the shallows at less than 1 m. Different shorelines could be distinguished from others based upon the relative proportions of substrate types and macrophyte canopy. The vast majority of macrophytes occurred within the first 3 m of depth. This zone was dominated by a thin but consistent cover of eelgrass (Zostera marina L.) on almost all shores with a current or wave regime conducive to the growth of this plant. However, the eelgrass beds were frequently in poor shape and the negative impacts of commonly occurring water column turbidity, siltation, or possible localized eutrophication, are suspected. All survey data were placed into a Geographic Information System, and this document is a guide to that package. The Geographic Information System could be used to answer management questions such as the placement and character of habitat compensation projects, the selection of nearshore protected areas or as a baseline to determine long term changes.

Vandermeulen, H. 2016. Video-sidescan and echosounder surveys of nearshore Bras d’Or Lake. Can. Tech. Rep. Fish. Aquat. Sci. 3183: viii + 39 p.

Cite this data as: Vandermeulen H. Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - Whycocomagh 2007. Published May 2022. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Commercial catches sampling program in the Estuary and Gulf of St. Lawrence – Stimpson`s surfclam (Mactromeris polynyma)

Summary
The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities.

Data
This dataset on Stimpson`s surfclam (Mactromeris polynyma) includes the metadata, sample weight, the shell width and the number of specimens measured. This dataset covers the periods of 1992, 1994-1998 and 2000-2021. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Counts of harbour seals (Phoca vitulina) and grey seals (Halichoerus grypus) from an aerial survey of the coast of the Newfoundland Shelf and Sandwich Bay, Labrador during the summer of 2021

Harbour seals reside throughout the year around Newfoundland and Labrador (NL). The first systematic survey for harbour seals occurred along the NL Shelf during July and August 2021 to obtain counts of hauled out individuals and assess distribution. Grey seals are seasonal residents in NL, mainly present in the summer and autumn months. Grey seals were also recorded during the survey as these two species can share haul-out locations. Surveys were flown along the coastline with a Bell 429 helicopter with photographs taken of hauled out seals. 


This data includes the counts of hauled out harbour, grey and unknown seals seen during the survey. Adjusted counts are also provided, which assign the unknown seals to species based on the number of positively identified harbour and grey seals from each survey day. The realized survey coverage (survey tracks) is also included. 


Cite this data as: Hamilton, C.D., Goulet, P.J., Stenson, G.B., and Lang, S.L.C. 2024. Data of: Counts of harbour seals (Phoca vitulina) and grey seals (Halichoerus grypus) from an aerial survey of the coast of the Newfoundland Shelf and Sandwich Bay, Labrador during the summer of 2021


This data can be found in: 


Hamilton, C.D., Goulet, P.J., Stenson, G. B., and Lang, S.L.C. 2023. Counts and spatial distribution of harbour seals (Phoca vitulina) and grey seals (Halichoerus grypus) from an aerial survey of the coast of the Newfoundland Shelf and Sandwich Bay, Labrador during the summer of 2021. Can. Tech. Rep. Fish. Aquat. Sci. 3566: v + 39 p. https://publications.gc.ca/site/eng/9.927831/publication.html 


DFO. 20XX. Stock assessment of Atlantic harbour seals (Phoca vitulina vitulina) in Canada for 2019-2021. DFO Can. Sci. Advis Sec. Sci. Advis. Rep. 2023/XXX. 


Lang, S.L.C., St-Pierre, A.P., Hamilton, C.D., Mosnier, A., Lidgard, D.C., Goulet, P., den Heyer, C.E., Bordeleau, X., Irani, A.I., and Hammill, M.O. 20XX. Population status assessment and Potential Biological Removal (PBR) for the Atlantic harbour seal (Phoca vitulina vitulina) in Canadian waters. DFO Can. Sci. Advis. Sec. Res. Doc. 2024

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Multidisciplinary Arctic Program (MAP)-Last Ice, 2018 Spring Campaign: Sea ice fatty acids and stable isotopes

In 2018, Fisheries and Oceans Canada initiated the Multidisciplinary Arctic Program (MAP) – Last Ice, the first ecosystem study of the poorly characterized region of Tuvaijuittuq, where multiyear ice still resides in the Arctic Ocean. The program MAP-Last Ice takes a coordinated approach to integrate the physical, biochemical, and ecological components of the sea ice-ocean connected ecosystem and its response to climate and ocean forcings. This program provides baseline ecological knowledge for Tuvaijuittuq and, in particular, for its unique multiyear ice ecosystem. The database provides baseline data on fatty acid composition and stable isotopes signatures of sea ice communities in multi- and first-year ice in Tuvaijuittuq. The data were collected during the 2018 spring field campaign of the MAP-Last Ice Program, offshore of Canadian Forces Station (CFS) Alert, in the Lincoln Sea.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Lumpfish coastal presence in the fluvial section and Estuary of St. Lawrence

Layer that includes the known information on coastal presence for lumpfish in the St. Lawrence River and Estuary according to a literature review of documents produced between 1987 and 1999.

Additional Information

Lumpfish's coastal presence was produced according to a literature review of the following documents:

Association Québécoise des Techniciens(nes) en Aménagement Cynégétique et Halieutique (AQTACH). 1987. Suivi des captures de cinq pêches à fascines de la rive nord du Saint-Laurent. Document présenté au ministère du Loisir, de la Chasse et de la Pêche – Direction régionale de la Côte-Nord. 50 p.

Bérubé, S.  Lambert, J.-D. 1999. Communautés ichtyennes côtières de l'estuaire du Saint-Laurent en 1996 et 1997 : suite du suivi ichtyologique (1986-1995). Rapp. tech. can. sci. halieut. aquat., 2281, 62 p.

Naturam Environnement. 1997. Acquisition de connaissances et mise en valeur des habitats du poisson du complexe Baie Verte/Baie Laval, phase 3 : rapport final.   Document réalisé par la Corporation de développpement de la Baie Verte avec l'aide du MPO dans le cadre du Plan d'action pour l'habitat du poisson.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Seasonal dissolved inorganic carbon climatology of the Canadian Pacific Exclusive Economic Zone from BCCM model (1981-2010)

Description:
Seasonal mean dissolved inorganic carbon concentration from the British Columbia continental margin model (BCCM) were averaged over the 1981 to 2010 period to create seasonal mean climatology of the Canadian Pacific Exclusive Economic Zone.

Methods:
Dissolved inorganic carbon concentrations at up to forty-six linearly interpolated vertical levels from surface to 2400 m and at the sea bottom are included. Spring months were defined as April to June, summer months were defined as July to September, fall months were defined as October to December, and winter months were defined as January to March. The data available here contain raster layers of seasonal dissolved inorganic carbon concentration climatology for the Canadian Pacific Exclusive Economic Zone at 3 km spatial resolution and 47 vertical levels.

Uncertainties:
Model results have been extensively evaluated against observations (e.g. altimetry, CTD and nutrient profiles, observed geostrophic currents), which showed the model can reproduce with reasonable accuracy the main oceanographic features of the region including salient features of the seasonal cycle and the vertical and cross-shore gradient of water properties. However, the model resolution is too coarse to allow for an adequate representation of inlets, nearshore areas, and the Strait of Georgia.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada
Program Activity Tracking for Habitat (PATH) system

The Government of Canada continues to strive to be ever more open and transparent. This means a government that is open by default providing better digital capacity and services for Canadians.

Under a modernized Fisheries Act, Fisheries and Oceans Canada (DFO) has made available an online Fisheries Act (FA) Registry that facilitates access to data and information, including geospatial data, about projects as well as regulatory process information. 

The new online version of the FA Registry is now available to Canadians. 

The FA Registry is currently accessible through the Common Project Search Portal, a one-stop online location for Canadians to search and browse through DFO authorizations as well as projects and assessments submitted to the Impact Assessment Agency of Canada and Transport Canada.

DFO will be undertaking continuous development of the Fisheries Act Registry. This release is the second step towards implementing the full FA Registry that will provide additional content as well as new features to the FA Registry, increasing transparency and proactive disclosure as well as improving digital capacity and service for Canadians.

Organization: Fisheries and Oceans Canada | Pêches et Océans Canada