AndreaBozzo/ceres-open-data-index huggingface dataset:
Grid extracted from GMRT Map Tool for the BlackSea region

[Lien vers la fiche source] Ryan, W.B.F., S.M. Carbotte, J.O. Coplan, S. O'Hara, A. Melkonian, R. Arko, R.A. Weissel, V. Ferrini, A. Goodwillie, F. Nitsche, J. Bonczkowski, and R. Zemsky (2009), Global Multi-Resolution Topography synthesis, Geochem. Geophys. Geosyst., 10, Q03014, doi: 10.1029/2008GC002332 Extraction of the GMRT grid for the Black Sea region of EMODnet bathymetry. GMRT overview from https://www.gmrt.org/about/index.php The Global Multi-Resolution Topography (GMRT) Synthesis is a multi-resolution Digital Elevation Model (DEM) maintained in three projections and managed with a scalable global architecture that offers infrastructure for accessing the DEM as grids, images, points and profiles. A mask layer is available that highlights the location of high-resolution data. Most curatorial effort for GMRT is focused on cleaning and processing ship-based multibeam sonar data acquired by the US Academic Research Fleet (ARF) so they can be gridded at their full spatial resolution (~100m in the deep sea). These data are seamlessly overlain on lower resolution observed and predicted bathymetry data and are integrated with terrestrial elevation data to deliver to users the best resolution data that have been curated for a particular area area of interest.
Budget primitif 2024

Crédits de dépenses et de recettes votés au stade du budget primitif 2024 pour le budget principal et les budgets annexes. Le jeu de données a été produit suivant le schéma du socle commun des données locales dont les spécifications sont consultables ici: [https://schema.data.gouv.fr/scdl/budget/0.8.1/documentation.html] Le jeu standard a été enrichi par deux champs supplémentaires pour permettre la fusion des données du budget principal et des budgets annexes.
Meta-analysis data quantifying the effect of agricultural practice on soil microbial biomass phosphorus

[Lien vers la fiche source] The dataset for the meta-analysis collected results from papers published between 1993 and February 2023 in the field. Data were collected from 135 peer-reviewed papers on 970 paired observations of soil microbial biomass phosphorus influenced by agricultural practices. All common management practices were included, such as application of mineral fertilizers, organic amendments (including application of straw, manure, biochar, compost, etc.), intercropping, and no- or reduced-tillage. In addition, the dataset includes metadata on categories of variables related to microbial biomass phosphorus, such as environmental, agronomic, and other soil characteristics.
Etablissements plasturgistes en Pays de la Loire

Ce jeu de données correspond à la liste des établissements plasturgistes présents sur la région Pays de la Loire. Cette liste a été établie dans le cadre de l'étude sur la filière Plastiques réalisée par Solutions&Co. Retrouvez les éléments de l'étude et les établissements plasturgistes sur le tableau de bord de Solutions&Co : [https://www.paysdelaloire-eco.fr/ressources-analyses/filiere-plastique/filiere-plastique-les-entreprises-regionales/ ]
Big Box Retail Grocery Store and Electric Vehicle Station Load Profiles

This dataset includes yearlong, one-minute resolution time series profiles for the big box retail grocery stores stores simulated in Phoenix, Houston, Denver, and Minneapolis, as well as electric vehicle charging time series profiles for the various ports, charging levels, and station utilizations produced for the study "Impact of electric vehicle charging on the power demand of retail buildings", published in 2021 (https://doi.org/10.1016/j.adapen.2021.100062).
HIPPO environmental monitoring: Impact of phytoplankton dynamics on water column chemistry and the sclerochronology of the king scallop (Pecten maximus) as a biogenic archive for past primary production reconstructions

[Lien vers la fiche source] Given the importance of phytoplankton for marine ecosystems (oxygen production, carbon sequestration, base of food webs, etc.), many studies focus on the reconstruction of its past temporal dynamics. Over the last decades, important changes of these dynamics have been observed, both in the phenology of the blooms and in the composition of microalgal communities. However, currently available data do not allow to go back far enough in time to quantify the actual impact of anthropogenic activities on these changes. However, the structural and/or chemical studies of the shell of the king scallop, Pecten maximus, hold the potential to cover this lack of data and provide informations about the environment they experienced. In order to better understand the processes which drive the incorporation of chemical elements into scallop shells and their links with phytoplankton dynamics, an environmental monitoring was conducted at Lanvéoc (Bay of Brest; France; 48°17'39"N - 04°27'12"W) between March and October 2021. During this survey, water samples from surface and bottom layers were collected in a bi-weekly or a weekly basis in order to analyse various environmental parameters (nutrients, phytoplankton dynamics, trace element concentration in the particulate and dissolved fraction, particulate organic carbone and nitrogen, chlorophyll, pheophytin, biogenic silicon, etc.). A sediment trap has also been used to better understand the chemical dynamics of the sedimenting matter. Simultaneously, several instruments, such as an Underwater Vision Profiler (UVP6) and sambat probes, were deployed at Lanvéoc throughout the year and continuously recorded additional parameters (particle concentration, temperature, salinity, pH, dissolved oxygen, etc.). Furthermore, scallops which experienced one winter season (age-class I) were deposited at the beginning of the survey both in direct contact with the substract and in a cage, located 1 m above it. At the end of the monitoring, these scallops were recovered and their growth rates as well as the chemical composition of their calcitic stuctures were measured in a daily basis. In addition to the objectives of the HIPPO project, the dataset that is available here can potentially be very useful for other scientists performing sclerochronological investigations, studying biogeochemical cycles or conducting various ecological research projects.
Lagrangian drifters in the Southwestern Atlantic Ocean

[Lien vers la fiche source] "55 drifters were deployed along two zonal transects centered at 47 and 47.25ºS on September 8, 2021(Fig. 1). Spacing between the initial deployment positions of the drifters varied between 14 km and 18 km in the continental shelf providing the position every 30 minutes and between 3 km and 6 km over the continental slope with temporal resolution of 10 minutes. The shortest distances between deployment positions correspond to drifters deployed close to the 200 m isobath. The drifters have a 6 m long, 1 m diameter holey sock drogue centered at 15 m depth to track currents at that depth. Each file contains a drifter trajectory in the NetCDF format with the ID number, longitude, latitude and time. The dataset includes raw positions; For details about the data processing, e.g. the methodology applied to detect the drogue loss, see https://doi.org/10.1016/j.dsr.2024.104319 and https://doi.org/10.1029/2023JC020446
MESURHO coastal station time series (2009-2021) : long-time high frequency monitoring off the Rhone River mouth

[Lien vers la fiche source] The MesuRho station is a multi-parameter observing platform located at the Rhone River mouth and installed on a navigation buoy, Roustan Est. It is dedicated to the study of trends and impacts of extreme events (floods, storms, heat waves) on hydrology, currents, biogeochemistry and sedimentary dynamics. During the period 2009-2021, the station was located 2,5km away from the river (43.1913°N, 4.5197°E), where the averaged water depth evolved from 20 to 17m depth. Near real-time data were acquired every 30 minutes for most of them and transmitted to the Coriolis data Center to support operational oceanography and facilitate maintenance. Near real-time qualified data are provided, together with post-processed data of velocity and waves from the ADCP. Raw delayed time hydrology data (from Hydrocat and Wisens CTDs) are also provided. The MesuRho station is a component of the national high frequency coastal observing network COAST-HF (http://www.coast-hf.fr) from the ILICO research infrastructure (http://www.ir-ilico.fr) and of the Rhône Sediment Observatory (OSR). Near real-time data can be displayed and downloaded from the website: https://www.coriolis-cotier.org/.
High-resolution bathymetry map (15-m grid) of a segment of the SWIR provided by MBES data acquired during the 2021 SWINGS marine expedition on the Marion Dufresne vessel

[Lien vers la fiche source] A MBES acoustic coverage of the PE-1 segment of the SWIR (South West Indian Ridge), more specifically in the vicinity of the dredge 5 location of the SWIFT cruise (2001), was carried out during the SWINGS cruise (https://doi.org/10.17600/18001925) with the French research vessel Marion Dufresne in 2021. SWINGS data were acquired with the hull-mounted multibeam echosounder Kongsberg EM122 12 kHz using an optimised configuration for bathymetry data collection: vessel speed of 5 knots, dual swath, CW signal and an angular opening of 120°. Acoustic data were processed with GLOBE software (https://doi.org/10.17882/70460) to provide a high-resolution bathymetry map (grid resolution of 15 m).
Plankton and particles from Seaexplorer glider and UVP6 across the Ligurian Front

[Lien vers la fiche source] We targeted a permanent mesoscale front in the Ligurian Sea (NW Mediterranean) that we repeatedly sampled between January and June 2021 using a SeaExplorer glider equipped with a UVP6, a versatile in situ imager. We aimed to resolve plankton and particle distribution during the spring bloom, to assess whether the front was a location of increased concentration of zooplankton, and if it constrained the distribution of particles. During the 5 months, the glider did more than 5,000 dives and the UVP6 collected 1.1 million images. Images captured by the UVP6 during cruising (n = 785,405) were imported into the Morphocluster application to quickly detect large clusters of similar objects (e.g. marine snow aggregates). In a second step, images collected during back transects (n = 434,129, on which we focused our analyses) were imported onto the EcoTaxa web application with their Morphocluster label in order to be sorted at a finer scale into taxonomic or morphological groups (marine snow, artefact, badfocus, reflection or unidentifiable) with the help of a supervised machine learning algorithm. As sorting all 400k+ images would have required a multiple months effor, we instead decided to rely on the prediction of a Random Forest classifier fed with both handcrafted and deep features generated by a MobileNet V2 feature extractor previously finetuned on UVP6 data. We selected a RF classifier for the following reasons: RFs tend to produce good classification probability estimates (Niculescu-Mizil and Caruana 2005), they are faster to train than a full CNN stack and, when trained with deep features, they perform as well as a full CNN. The dataset thus contains the following elements: - CTD data, some collected by the glider payload, and other collected by a SMRU - particles data, exported from Ecopart - plankton data, exported from Ecotaxa. Validated objects were either individually inspected by an operator, or batch validated in the morphocluster application. Predicted classifications were not reviewed.
Depth-migrated High Resolution seismic reflection profiles and interval velocity models in the western Black Sea

[Lien vers la fiche source] This seismic data set was recorded in September 2015 on board the R/V Pourquoi Pas? during the GHASS cruise (IFREMER) on the western Black Sea, offshore Romania. The available profiles (part of the collected data) within this deposit are located on the continental slope, bathymetry between 500 to 1200 meters. The pre-processing of the seismic data included common midpoint binning @6.25 meters, trace and shot edition, source delay correction, and a 35-375 Hz band pass filtering. Detailed Root Mean Square Velocity analyses were performed on semblance panels computed using super gathers every 150 m. Normal Move Out time correction was then applied on the Common Mid Point (CMP) using these velocities prior to stack. Interval velocities were computed using the Dix equation. The velocity model was then interpolated every CMP location, converted to depth and smoothed to perform post-stack depth migration. The depth migrated sections and the depth velocity models have been output to standard SEG-Y rev1 format (https://library.seg.org/pb-assets/technical-standards/seg_y_rev1-1686080991247.pdf) with values written using “big-endian” byte ordering and IEEE floating-point. For a given profile, both SEGY files have the same number of traces and the same bin locations. Velocity unit is in meter.second-1. The depth sampling is set to 0.5 meter for both files. The recording delay is zero for the depth migration SEGY files. The delay is coded in meters and constant for a given depth velocity SEGY file, stored within the Trace Header (bytes 109-110). Trace coordinates are also stored within the Trace Header using WGS84 +DDDMMSS.ss format with a scale factor of -100 (bytes 81-88, which means that the value has to divided by 100) . For more convenient access to the location of the profiles, these coordinates are also stored into ASCII files using decimal degrees.
The use of nanopore sequencing to analyze the chloroplast transcriptome part 2 – bioinformatic analyzes and virtual RN blots

[Lien vers la fiche source] Nanopore sequencing of full-length cDNAs offers unprecedented details of the plastid RNA metabolism. After the generation of the nanopore reads, several bioinformatic steps are required to analyze the data. In this chapter, we describe in a few simple command lines the processing and mapping of the reads as well as the generation of virtual Northern blots as a simple and familiar way to visualize Nanopore sequencing data.
Les établissements de la filière du recyclage des plastiques en Pays de la Loire en 2023

Ce jeu de données correspond à la liste des établissements de la filière du recyclage des plastiques en Pays de la Loire en 2023. Cette liste a été établie dans le cadre de l'étude sur la filière Plastiques réalisée par Solutions&Co. Cette liste n'est pas exhaustive. Retrouvez les éléments de l'étude et les établissements plasturgistes sur le tableau de bord de Solutions&Co : [https://www.paysdelaloire-eco.fr/ressources-analyses/filiere-plastique/filiere-plastique-les-entreprises-regionales/ ]
Data on cow activity in relation to health and welfare

[Lien vers la fiche source] This dataset contains hours per hours the activity level of cows on four farms. These data were used in Wagner et al. 2021. The dataset contains 4 files, one for each farm. Files are structured as follows: * cow working id; * date; * hour (integer); * the time (s) spent 'walking' during one hour (the cow is positioned 'in alleys'); * the time (s) spent 'resting’ during one hour (the cow is in a resting area (typically cubicles)); * the time (s) spent 'eating' during one hour (the cow is positioned at the feeding table); * the activity level (unitless), which is the weighted sum of the time spent in each activity (with the following weights: -0.23 for resting, +0.16 for in alleys, and +0.42 for eating). Due to the weights, the hourly activity level can range from -828 (i.e. -0.23*3600) to 1512 (i.e. 0.42*3600); * finally, for each of the 11 types of events, a boolean is provided, for the question "is there this type of event on this hour ?" (i.e. 1 means this type of event were reported for this hour; 0 means that this type of event were not reported for this hour). Note that in fact daily events are reported here at hourly scale. There are 11 types of events: * * oestrus; * calving; * lameness includes all types of lameness and issues on claw or leg; * mastitis includes all types of mastitis; * Event LPS is specific to experimentation as it is for administered lipopolysaccharide (LPS) in the mammary gland on one day to induce inflammation; * Event acidosis stands for subacute ruminal acidosis; * Event labelled 'other_disease’, which contains all other diseases such as colic, diarrhea, ketosis, milk fever or other infectious disease; * Event accidents contains all types of accidents such as retained placenta or vaginal laceration; * Event disturbance is mild intervention on animal (e.g. late feeding, alarm test, animal tied for injection, claw trimming, drying of the cow) and other issues on the day but that did not concerned management changes; * Event mixing is for when cows were mixed or moved to another park. * Event labelled ‘management_changes’ contains marginal management such as ration changes or bed filling. This event is reported in the dataset, but is not considered as influent on the animal behaviour; A final Boolean sum up the information on whether this hour is considered as normal (i.e. if all the booleans (without considering the management changes one) are equal to 0 then this hour can be considered as normal, then the boolean is set to 1). Dataset 2 was also used in Wagner et al., 2020 https://doi.org/10.1016/j.compag.2020.105233 and in Wagner et al., 2020, https://doi.org/10.1007/978-3-030-59491-6_32
ENVRI METHANE cruise - Multibeam Bathymetry in the Romanian Territory Waters

[Lien vers la fiche source] During a cruise within the ENVRI+ Project WP4, a joint pilot experiment to measure methane transfer from the seafloor to the atmosphere, bathymetry was recorded using a hull-mountes Elac Seabeam 1050 multibeam system. https://doi.org/10.1594/PANGAEA.913704 Cruise of the R/V Mare Nigrum vessel (https://www.eurofleets.eu/vessel/rv-mare-nigrum/)
Places - Vintage/Millésimé - United States of America

This dataset is part of the Geographical repository maintained by Opendatasoft. This dataset contains data for places and equivalent entities in United States of America. This layer both incorporated places (legal entities) and census designated places or CDPs (statistical entities). An incorporated place is established to provide governmental functions for a concentration of people as opposed to a minor civil division (MCD), which generally is created to provide services or administer an area without regard, necessarily, to population. Places always nest within a state, but may extend across county and county subdivision boundaries. An incorporated place usually is a city, town, village, or borough, but can have other legal descriptions. CDPs are delineated for the decennial census as the statistical counterparts of incorporated places. CDPs are delineated to provide data for settled concentrations of population that are identifiable by name, but are not legally incorporated under the laws of the state in which they are located. The boundaries for CDPs often are defined in partnership with state, local, and/or tribal officials and usually coincide with visible features or the boundary of an adjacent incorporated place or another legal entity. CDP boundaries often change from one decennial census to the next with changes in the settlement pattern and development; a CDP with the same name as in an earlier census does not necessarily have the same boundary. The only population/housing size requirement for CDPs is that they must contain some housing and population. Processors and tools are using this data. Enhancements * Add ISO 3166-3 codes. * Simplify geometries to provide better performance across the services. * Add administrative hierarchy.
Counties - Vintage/Millésimé - United States of America

This dataset is part of the Geographical repository maintained by Opendatasoft. This dataset contains data for counties and equivalent entities in United States of America. The primary legal divisions of most states are termed counties. In Louisiana, these divisions are known as parishes. In Alaska, which has no counties, the equivalent entities are the organized boroughs, city and boroughs, municipalities, and for the unorganized area, census areas. The latter are delineated cooperatively for statistical purposes by the State of Alaska and the Census Bureau. In four states (Maryland, Missouri, Nevada, and Virginia), there are one or more incorporated places that are independent of any county organization and thus constitute primary divisions of their states. These incorporated places are known as independent cities and are treated as equivalent entities for purposes of data presentation. The District of Columbia and Guam have no primary divisions, and each area is considered an equivalent entity for purposes of data presentation. The Census Bureau treats the following entities as equivalents of counties for purposes of data presentation: Municipios in Puerto Rico, Districts and Islands in American Samoa, Municipalities in the Commonwealth of the Northern Mariana Islands, and Islands in the U.S. Virgin Islands. The entire area of the United States, Puerto Rico, and the Island Areas is covered by counties or equivalent entities. Processors and tools are using this data. Enhancements * Add ISO 3166-3 codes. * Simplify geometries to provide better performance across the services. * Add administrative hierarchy.
Zip Codes Tabulation Areas 5 digits - Vintage/Millésimé - United States of America

This dataset is part of the Geographical repository maintained by Opendatasoft. This dataset contains data for zip codes 5 digits in United States of America. ZIP Code Tabulation Areas (ZCTAs) are approximate area representations of U.S. Postal Service (USPS) ZIP Code service areas that the Census Bureau creates to present statistical data for each decennial census. The Census Bureau delineates ZCTA boundaries for the United States, Puerto Rico, American Samoa, Guam, the Commonwealth of the Northern Mariana Islands, and the U.S. Virgin Islands once each decade following the decennial census. Data users should not use ZCTAs to identify the official USPS ZIP Code for mail delivery. The USPS makes periodic changes to ZIP Codes to support more efficient mail delivery. Processors and tools are using this data. Enhancements * Add ISO 3166-3 codes. * Simplify geometries to provide better performance across the services. * Add administrative hierarchy.
States - Vintage/Millésimé - United States of America

This dataset is part of the Geographical repository maintained by Opendatasoft. This dataset contains data for states and equivalent entities in United States of America. Processors and tools are using this data. States and equivalent entities are the primary governmental divisions of the United States. In addition to the fifty States, the Census Bureau treats the District of Columbia, Puerto Rico, and each of the Island Areas (American Samoa, the Commonwealth of the Northern Mariana Islands, Guam, and the U.S. Virgin Islands) as the statistical equivalents of States for the purpose of data presentation. Enhancements * Add ISO 3166-3 codes. * Simplify geometries to provide better performance across the services.
County Subdivisions - Vintage/Millésimé - United States of America

This dataset is part of the Geographical repository maintained by Opendatasoft. This dataset contains data for counties subdivisions and equivalent entities in United States of America. County subdivisions are the primary divisions of counties and their equivalent entities for the reporting of Census Bureau data. They include legally-recognized minor civil divisions (MCDs) and statistical census county divisions (CCDs), and unorganized territories. MCD States where no MCD exists or is not defined, the Census Bureau creates statistical unorganized territories to complete coverage. The entire area of the United States, Puerto Rico, and the Island Areas are covered by county subdivisions. Processors and tools are using this data. Enhancements * Add ISO 3166-3 codes. * Simplify geometries to provide better performance across the services. * Add administrative hierarchy.