AndreaBozzo/ceres-open-data-index huggingface dataset:
EMSO-Ligure Ouest observatory data (mooring ALBATROSS) from 2018-05 to 2019-05

[Lien vers la fiche source] The European Multidisciplinary Seafloor and water column Observatory (EMSO-ERIC, https://emso.eu/) is a research infrastructure distributed throughout Europe for seabed and water column observatories. It aims to further explore the oceans, better understand the phenomena that occur on the seabed, and elucidate the critical role that these phenomena play in global Earth systems. This observatory is based on observation sites (or nodes) that have been deployed in strategic locations in European seas, from the Arctic to the Atlantic, from the Mediterranean to the Black Sea. There are currently eleven deepwater nodes plus four shallow water test nodes. EMSO-Western Ligurian Sea Node (https://www.emso-fr.org/fr) is a second generation permanent submarine observatory deployed offshore of Toulon, France, as a follow up of the pioneering ANTARES neutrino telescope. This submarine network, deployed at a depth of 2450m, is part of KM3NeT (https://www.km3net.org/) which has a modular topology designed to connect up to 120 neutrino detection units, i.e. ten times more than ANTARES. The Earth and Sea Science (ESS) instrumentation connected to KM3NeT is based on two complementary components: an Instrumented Interface Module (MII) and an autonomous mooring line (ALBATROSS). The ALBATROSS line is an inductive instrumented mooring line (2000 m) composed of an acoustic communication system, two inductive cables equipped with CTD-O2 sensors, current meters and two instrumented buoys. The MII and the ALMBATROSS mooring line communicate through an acoustic link. The MII is connected to an electro-optical cable via the KM3NeT node allowing the data transfer from and to the land based controlled room.
Lagoon hydrodynamics of pearl farming atolls in French Polynesia : the case of Raroia Atoll (Tuamotu Archipelago)

[Lien vers la fiche source] Raroia Atoll has been instrumented over a period of 10 months (from May 2018 to late March 2019) separated into 3 Legs and 1 extra leg (namely "shortleg"). Physical process such as water level, wave climate, currents ciruclation, exchanges between ocean and lagoon by passes and "hoa" and water column stratification have been measured to characterized the hydrodynamic functioning of this semi-open pearl farming atoll. Numerous moorings have been deployed into lagoon, hoa, passes and external reef slope stations with common autonomous oceanographic instruments measuring at high sampling frequency. Sampling strategy available on Sextant - Marine Geographic Information System. More informations on ANR MANA project.
Evaluations de stocks - DEMERSTEM : WP1

[Lien vers la fiche source] Le projet DEMERSTEM est principalement orienté sur le développement de méthodes et de compétences pour l’évaluation des stocks dans un contexte dit « data-poor ». Dans ce cadre, différentes méthodes d’évaluations de stocks ont été étudiées puis appliquées avec les pays partenaires. Ces méthodes se distinguent par : - Les données d’entrées. - Les hypothèses sous-jacentes. - Les ajustements statistiques. En particulier, nous distinguons les modèles de production, se basant sur des données de captures, des approches basés sur des fréquences de tailles. Cette diversité de méthodes assure une complémentarité des évaluations permettant d’approfondir les conclusions, en combinant des approches apportant chacune des informations spécifiques. Par ailleurs, ce panorama des évaluations disponibles permet également de résumer quelles approches sont envisageables selon les données disponibles. Les présents documents décrivent les résultats obtenus pour chaque stock étudié au cours de ce projet.
Equipements sportifs

## Recensement des équipements sportifs, espaces et sites de pratiques Le recen­se­ment natio­nal de l’inté­gra­lité des équipements spor­tifs, espa­ces et sites de pra­ti­ques cons­ti­tue l’une des actions prio­ri­tai­res conduite par le ministère chargé des sports. La démar­che enga­gée a pour objec­tif de per­met­tre une bonne connais­sance partagée des équipements et sites existants et d’aider à une meilleure perception des inégali­tés ter­ri­to­ria­les dans leur répar­ti­tion. C'est un élément préalable à toute démarche prospective d'aménagement du territoire.
Randonnées Ceyrando - Ville de Ceyrat

Liste détaillant les 11 randonnées Ceyrando, association appartenant à Ceyrat, commune membre de Clermont Auvergne métropole. La liste des randonnées Ceyrando, association de la commune de Ceyrat, permet de connaître, pour chaque itinéraire les caractéristiques du parcours. Métadonnées : [https://schema.data.gouv.fr/PnX-SI/schema_randonnee/]
Données d'observations de cétacés

1 nouveau jeu de données totalisant 876 données d'observations de cétacés a été intégré à Borbonica et est désormais disponible à la recherche. Il s'agit de données issues des campagnes d’observation des cétacés réalisées entre 2018 et 2020 par Globice dans le cadre du programme ETCETRA (Étude des Cétacés de La Réunion et Actions de Coopération Régionale) (voir la [fiche de métadonnées] ). Le programme ETCETRA vise notamment à étudier les populations des dauphins côtiers tout autour de La Réunion (estimation d'‘abondance, taux de résidence, …) et à poursuivre l'‘effort de photo-identification des baleines à bosse pendant l'‘hiver austral. Ces nouvelles données permettent de faire progresser la connaissance sur les 10 espèces de dauphins et baleines observés durant le programme, dont certaines peu fréquentes dans les eaux réunionnaises comme la baleine à bec de Blainville (Mesoplodon densirostris, 3 observations), le Cachalot (Physeter macrocephalus, 1 observation) ou encore le Dauphin de Fraser (Lagenodelphis hosei Fraser, 1 observation). Les données ont été fournies par Globice dans le cadre de son adhésion à la charte du SINP 974.
EMSO-Ligure Ouest observatory data (mooring ALBATROSS) from 2014-09 to 2015-04

[Lien vers la fiche source] The European Multidisciplinary Seafloor and water column Observatory (EMSO-ERIC, https://emso.eu/) is a research infrastructure distributed throughout Europe for seabed and water column observatories. It aims to further explore the oceans, better understand the phenomena that occur on the seabed, and elucidate the critical role that these phenomena play in global Earth systems. This observatory is based on observation sites (or nodes) that have been deployed in strategic locations in European seas, from the Arctic to the Atlantic, from the Mediterranean to the Black Sea. There are currently eleven deepwater nodes plus four shallow water test nodes. EMSO-Western Ligurian Sea Node (https://www.emso-fr.org/fr) is a second generation permanent submarine observatory deployed offshore of Toulon, France, as a follow up of the pioneering ANTARES neutrino telescope. This submarine network, deployed at a depth of 2450m, is part of KM3NeT (https://www.km3net.org/) which has a modular topology designed to connect up to 120 neutrino detection units, i.e. ten times more than ANTARES. The Earth and Sea Science (ESS) instrumentation connected to KM3NeT is based on two complementary components: an Instrumented Interface Module (MII) and an autonomous mooring line (ALBATROSS). The ALBATROSS line is an inductive instrumented mooring line (2000 m) composed of an acoustic communication system, two inductive cables equipped with CTD-O2 sensors, current meters and two instrumented buoys. The MII and the ALMBATROSS mooring line communicate through an acoustic link. The MII is connected to an electro-optical cable via the KM3NeT node allowing the data transfer from and to the land based controlled room.
EMSO-Ligure Ouest observatory data (mooring ALBATROSS) from 2016-10 to 2017-06

[Lien vers la fiche source] The European Multidisciplinary Seafloor and water column Observatory (EMSO-ERIC, https://emso.eu/) is a research infrastructure distributed throughout Europe for seabed and water column observatories. It aims to further explore the oceans, better understand the phenomena that occur on the seabed, and elucidate the critical role that these phenomena play in global Earth systems. This observatory is based on observation sites (or nodes) that have been deployed in strategic locations in European seas, from the Arctic to the Atlantic, from the Mediterranean to the Black Sea. There are currently eleven deepwater nodes plus four shallow water test nodes. EMSO-Western Ligurian Sea Node (https://www.emso-fr.org/fr) is a second generation permanent submarine observatory deployed offshore of Toulon, France, as a follow up of the pioneering ANTARES neutrino telescope. This submarine network, deployed at a depth of 2450m, is part of KM3NeT (https://www.km3net.org/) which has a modular topology designed to connect up to 120 neutrino detection units, i.e. ten times more than ANTARES. The Earth and Sea Science (ESS) instrumentation connected to KM3NeT is based on two complementary components: an Instrumented Interface Module (MII) and an autonomous mooring line (ALBATROSS). The ALBATROSS line is an inductive instrumented mooring line (2000 m) composed of an acoustic communication system, two inductive cables equipped with CTD-O2 sensors, current meters and two instrumented buoys. The MII and the ALMBATROSS mooring line communicate through an acoustic link. The MII is connected to an electro-optical cable via the KM3NeT node allowing the data transfer from and to the land based controlled room.
Suivi plantations 2020 Cap Champagne et cimetière Saint-Leu – projet VELOUTIER

Projet VELOUTIER (Valorisation des Espaces Littoraux de l’Ouest réunionnais pour la ponte des Tortues marines : Impliquer, Eduquer, Réhabiliter), financé par le programme opérationnel européen FEDER sur une durée de 2 ans (fin de réalisation le 28 février 2022). Il s'agit de données flore acquises dans le cadre de projets de suivi des plantations pour la réhabilitation des plages de ponte des tortues marines : les projets VELOUTIER et AMEN'TORTUE. Ces données ont été fournies par le Centre d'étude et de découvertes des tortues marines (CEDTM) Un suivi individuel a été mis en place afin d'obtenir un taux de survie des plantations, d'orienter au mieux les potentielles futures plantations et de répondre à la demande de la dérogation espèces protégées. Le JDD correspond au plants vivants ou morts plantés dans le cadre du projet VELOUTIER pour la réhabilitation des plages de ponte des tortues marines. Les plants sont suivis à plusieurs temps. En plus de l'état des plants (si vivant ou mort ; mort correspond à la valeur « non observé » du champ « statObs » ), leur hauteur (cm) ont été suivis. La phénologie et l'état phytosanitaire a été noté de manière opportuniste. - Depuis le 1700-01-01 - Jusqu'au 2023-08-10
[Project DILEME] Lipid profiles of fish larvae

[Lien vers la fiche source] Estuaries are generally considered as key habitats for early life stages of fish. However, in the face of massive destruction of many estuarine intertidal areas, management and conservation measures are needed. Fish condition indicators may be used as proxy of habitat quality, which may provide valuable information for management of coastal areas. In this study, post-larvae of golden mullet (Chelon auratus) and European glass eels (Anguilla anguilla) were sampled in three sites in the Gironde estuary. Different lipid classes and fatty acids were quantified: phospholipids (globally, phosphatidylethanolamine and phosphatidylcholine), triglycerides, omega-3 (particularly docosahexaenoic and eicosapentaenoic acids), omega-6 and 18:1. These biomarkers provide information on the nutritional status of the larvae as well as on prey availability between sites. One site (the middle site, called SII) significantly differed from the others as it seemed to offer abundant and better quality prey. The very high levels of omega-3 contained in the post-larvae suggested that they fed preferentially on diatoms. However, the post-larvae of golden mullet that colonised this site also showed physiological stress that could be explained by exposure to pollutants through their prey.
Suivi plantations 2020 pour la réhabilitation des plages de ponte des tortues marines AMEN'TORTUE

Projet AMEN'TORTUE, financé par EDF Réunion dans le cadre du dispositif PAPLEO (fin de réalisation le juin 2021) Il s'agit de données flore acquises dans le cadre de projets de suivi des plantations pour la réhabilitation des plages de ponte des tortues marines : les projets VELOUTIER et AMEN'TORTUE. Ces données ont été fournies par le Centre d'étude et de découvertes des tortues marines (CEDTM). Un suivi individuel a été mis en place afin d'obtenir un taux de survie des plantations, d'orienter au mieux les potentielles futures plantations et de répondre à la demande de la dérogation espèces protégées. Le JDD correspond au plants vivants ou morts plantés dans le cadre du projet VELOUTIER pour la réhabilitation des plages de ponte des tortues marines. Les plants sont suivis à plusieurs temps. En plus de l'état des plants (si vivant ou mort ; mort correspond à la valeur « non observé » du champ « statObs » ), leur hauteur (cm) ont été suivis. La phénologie et l'état phytosanitaire a été noté de manière opportuniste. - Depuis le 1700-01-01 - Jusqu'au 2023-08-10
Low Voltage Poles

The Dataset georeferences the poles of the Low Voltage Network (BT), also suitable for use by Communications Network resources as defined in DL 123/2009. Additional information about this Infrastructure is available in the SIIA - Suitable Infrastructure Information System, from the regulatory entity ANACOM. [https://siia.anacom.pt/] Find out more about access to infrastructure use on the E-REDES website: [Access to Infrastructure Use] 1. The information made available by E-REDES constitutes an approximation to the values taken from the system and is based on the moment in which it is collected. Given that the connection points, the electricity distribution network, and the consumption and production values themselves are naturally very dynamic, it is safeguarded that the information made available may be subject to subsequent changes and updates, with the exception of any omissions and/or occasional inaccuracies of location that the information may contain. 2. In this way, E-REDES is not liable to third parties, namely, partners, service providers, contractors, users and customers, for damages that may arise as a result, direct or indirect, of the use of this Information, in particular when carrying out interventions, calculations and/or estimates, without confirming the accuracy and updating of the data, whereby it is duly noted that the consultation of this information does not affect the duty to promote a direct consultation with E-REDES in order to obtain updated information. The data provided by the E-REDES Open Data Portal is covered by open licenses (CC BY 4.0). There are no restrictions on access, under the commitment that data users cite the publisher. Therefore, we suggest that you cite the Open Data E-REDES Portal as: E-REDES – Distribuição de Eletricidade, “E-REDES Open Data Portal”. Accessed in “Data”. [Online] Available at [https://e-redes.opendatasoft.com/pages/homepage/] If you share on social media, please add #PortalOpenData_E_REDES
Evolutionary analyses and expression patterns of TCP family genes in Ranunculales

[Lien vers la fiche source] this dataset contains the transcript and protein assemblies for Aconitum napellus, Clematis stans, Ficaria verna, Helleborus orientalis and Nigella damascena inferred from de novo assembly of Illumina RNA-seq reads. The rawsequencing data are available from CATdb under the accession ngs2015_16_ranunculaceae
Répartition des postes de secours (MNS) sur la côte occidentale de l'île de La Réunion.

Répartition des postes de secours (MNS) sur la côte occidentale de l'île de La Réunion. Limitation d'utilisation Utilisation libre sous réserve de mentionner la source (DCE-POLMAR, DEAL, Ifremer, UBO) et la date de sa dernière mise à jour Contraintes d'accès Droit d’auteur / Droit moral (copyright)
LTDS EHV Sites

Our LTDS Extra High Voltage Sites dataset comprises of all the Northern Powergrid’s EHV operational sites, The geographical map of all EHV operational locations can be accessed via the “[Network Map]” tab on our LTDS page. If you are unsure of any of the column meanings, please hover over the column heading for a description. Related Feature Pages [Long-Term Development Statement (LTDS)] - Our LTDS provides essential network and asset information required to carry out studies of the NPg network to access potential connection points. [Primary Substation Dashboard] - Our Primary substation dashboard allows you to pull out data from across our Open Data Portal dependant on your selection of a Primary substation. [Grid Supply Point (GSP) Dashboard ] - Our Grid Supply Point (GSP) dashboard allows you to pull out data from across our Open Data Portal dependant on your selection of a GSP. Glossary of Terms Our [Glossary] dataset provides definitions for various terms and acronyms found throughout our data. If the term you are searching for isn't in our list, please let us know via our [Open Data team] and we will get it added! Data Governance If you wish to view the data triage document for any dataset, they can be found in our [Data Triage Assessment] dataset. This dataset DOES require a login to view Any data caveats for the dataset are listed below - Update Frequency: Twice a year (May & November)
Transcriptomic sequence data for the pine processionary moth Thaumetopoea pityocampa and alignments used for the phylogenetic analyses of the cypovirus, the iflavirus and the densovirus identified

[Lien vers la fiche source] This dataset corresponds to the fasta file comprising the assembled transcriptome for the pine processionary moth Thaumetopoea pityocampa, and the 3 fasta files containing the alignments used for the phylogenetic analyses of viruses identified from the transcriptome, namely the cypovirus, the iflavirus and the densovirus
RAD sequencing data from: A first inference of the phylogeography of the worldwide invader Xylosandrus compactus

[Lien vers la fiche source] We used the RADIS pipeline (Cruaud et al. 2016) to i) demultiplex individuals using process_radtags (Catchen et al. 2013), ii) homogenise read length and remove a few low-quality bases at the 3’-ends by trimming reads to 139 bp and iii) remove PCR duplicates using clone_filter (Catchen et al. 2013). We analysed the data using STACKS (Catchen et al. 2013; Rochette et al. 2019), and decided to focus exclusively on the results obtained with M = 6 and n = 4. Using the BWA-MEM algorithm (Li and Durbin 2009), we mapped the loci obtained on Ambrosiella xylebori's genome (Vanderpool et al. 2018) (accession number: ASM277803v1) to create a blacklist. Xylosandruscompactus.vcf contains Xylosandrus compactus' loci. It was obtained by using the blacklist to filter the fungus’ reads in STACKS’ populations module, and removing loci with a mean depth lower than 8 or shared by less than 70% of the specimens (r = 0.7). Ambrosiellaxylebori.vcf contains Ambrosiella xylebori's loci. It was obtained by using the loci mapping on Ambrosiella xylebori's genome as a whitelist in STACKS' populations module, , and removing loci with a mean depth lower than 4 or shared by less than 70% of the specimens (r = 0.3). popmap.txt corresponds to the popmap file. metadata-RADseq-Xylosandrus-compactus.csv contains all information on specimens used in the RAD sequencing experiment.
Visible - Near infrared hyperspectral dataset of healthy and infected apple tree leaves images for the monitoring of apple fire blight

[Lien vers la fiche source] This dataset consists of three groups of hyperspectral images of apple tree plants. The first group of images consists of a temporal monitoring of seven apple tree plants, infected with fire blight (Erwinia amylovora), and six control plants over a period of 15 days. The second group of images includes a temporal monitoring of three infected plants, seven plants subjected to water stress, and six control plants. The third group of images corresponds to acquisitions made in the orchard on eight trees showing symptoms of fire blight and six control trees. The positions of the infected pixels were provided for all the images of the infected plants.
Cell specialization and coordination in Arabidopsis leaves upon pathogenic attack revealed by scRNAseq

[Lien vers la fiche source] Plant defense responses involve several biological processes that allow plants to fight against pathogenic attacks. How these different processes are orchestrated within organs and depend on specific cell types is poorly known. Here, using scRNAseq technology, we identified 18 distinct cell populations in wild-type Arabidopsis leaves inoculated with the hemibiotrophic pathogen Pseudomonas syringae DC3000. Among those, we retrieved major cell types of the leaves (mesophyl, guard, epidermial, companion and vascular S cells) to which we could associate characteristic transcriptional reprogramming, thereby specifying different cell-type responses to the pathogen. Further analyses of transcriptional dynamics, based on inference of cell trajectories, indicated that the different cell types, in addition to their characteristic defense responses, can also share similar modules of gene reprogramming, allowing for instance vascular S cells, epidermal cells and mesophyl cells to converge towards an identical cell fate, mostly characterized by lignification and detoxification functions. Moreover, it appeared that defense responses of these three cell types can evolve along a second separate path. As this divergence does not correspond to the differentiation between immune and susceptible cells, we speculate that this might reflect the discrimination between cell-autonomous and non-cell-autonomous responses. Altogether our data provide an upgraded framework to describe, explore and explain the specialization and the coordination of plant cell responses upon pathogenic challenge. this dataset contains the output of the CellRanger count command for the three samples of the project. They are the input for the analytical script provided at https://github.com/Bastien-mva/pipeline_seurat_monocle
Demonstration of Type A volume Bragg gratings inscribed with a femtosecond Gaussian-Bessel laser beam

[Lien vers la fiche source] Data set from Demonstration of Type A volume Bragg gratings inscribed with a femtosecond Gaussian-Bessel laser beam - Publication : Harb J., Talbot L., Petit Y., Bernier M. and Canioni L. Demonstration of Type A volume Bragg gratins inscribed with a femtosecond Gaussian-Bessel laser beam. Opt. Express 2023 vol. 31, n°10, p. 15736-15746. HAL : [https://hal.science/hal-04085272 ] Dataset production context : To our knowledge, we report on the first demonstration of Type A VBGs inscribed in silver-containing phosphate glasses by femtosecond laser writing. The gratings are inscribed plane-by-plane by scanning the voxel of a 1030 nm Gaussian-Bessel inscription beam. This results in a refractive-index modification zone, induced by the appearance of silver clusters, extending over a much larger depth than those obtained with standard Gaussian beams. As a result, a high diffraction efficiency of 95% at 632.8 nm is demonstrated for a 2-µm period transmission grating with a 150-µm effective thickness indicating a strong refractive-index modulation of 1.78 × 10−3. Meanwhile, a refractive-index modulation of 1.37 × 10−3 was observed at a wavelength of 1.55 µm. Thus, this work opens the avenue for highly effective femtosecond-written VBGs suitable for industrial applications. For more information see the article.