AndreaBozzo/ceres-open-data-index huggingface dataset:
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in February 2016

Flow cytometry data was collected in February 2016, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in September 2016

Flow cytometry data was collected in September 2016, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in November 2015

Flow cytometry data was collected in November 2015, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in September 2015

Flow cytometry data was collected in September 2015, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in February 2015

Flow cytometry data was collected in February 2015, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in April 2015

Flow cytometry data was collected in April 2015, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in July 2014

Flow cytometry data was collected in July 2014, in waters off South Australia. 


The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in October 2014

Flow cytometry data was collected in October 2014, in waters off South Australia. 


The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in May 2014

Flow cytometry data was collected in May 2014, in waters off South Australia. 


The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in February 2013

Flow cytometry data was collected in February 2013, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data is normally collected for picophytoplankton, bacteria and viruses, but not on this cruise

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute
SAIMOS - Biological and Flow Cytometry data collected from CTD stations in South Australia, in April 2012

Flow cytometry data was collected in April 2012, in waters off South Australia. 

The general purpose of the study is to be able to establish background knowledge on the ecosystem on the continental shelf of South Australia and the impact of upwelling/saline outflow events on microbial communities to ultimately develop a biogeochemical model of the region. Sampling was carried out during cruises conducted on board the RV Ngerin as part of the Southern Australian Integrated Marine System (SAIMOS). During each cruise, the physical, chemical and biological properties of the chlorophyll fluorescence maximum (DCM) layer were investigated. Flow cytometry data has been collected for picophytoplankton, bacteria and viruses.

Six main stations have been sampled over the course of the study, five are located on the 100 m isobath, i.e. RS (35.508S, 136.278E), B2 (35.418S, 136.148E), B3 (35.258S, 136.048E), B4 (35.168S, 135.418E) and B5 (35.008S, 135.198E), and one from an offshore station (B1; 36.188S, 136.178E) located southwest of Kangaroo Island. Note that combining the distances between stations (14–25 nautical miles), the average component of the current velocity at middepth along the shelf (0.01 m s21) and the average speed of the vessel (i.e. 9 knots) indicate that different water masses were sampled at each station. Additional samples have on occasion been collected from the National Reference Station (NRS) at Kangaroo Island (35.832S, 136.447E) and the SA Spencer Gulf Mouth Mooring (SAM8SG, 35.25S, 136.690E), where the saline outflow occurs.

Tags: Bacteria, Bathymetry, Biosphere, Chlorophyll, IMOS Node, Inorganic Matter, Microbiota, Niskin Bottles, Nitrogen, Ocean Chemistry, Ocean Temperature, Ocean Winds, Oceans, Organic Matter, Phosphate, Phytoplankton, Picophytoplankton, SA-IMOS, Sea Surface Temperature, Silicate, Southern Australian Integrated Marine Observing S, Surface Winds, Suspended Solids, Vegetation, Virus, Water Depth
Organization: South Australian Research and Development Institute