Biodiversity and ecophysiology of Antarctic sea-ice bacteria

The data set includes information relevant for the study and description of sea-ice bacteria contains the following dataset subgroups and is organised by REFERENCE number.
1) Isolation data: strain designations (e.g. culture collection names are indicated for type cultures); media used for isolation and routine cultivation; temperature used for incubation; any special conditions (e.g. enrichment conditions) used for isolation; isolation site and type (e.g. sea-ice); availability of the indicated strain from the chief investigator (J. Bowman)
2) Phenotypic data: Includes morphological, physiological and biochemical tests performed. Details on how these were performed are indicated in the relevant reference.
3) Growth/temperature data: data for temperature related growth curves are given where available. Methods are indicated in the associated reference.
4) Fatty acid/chemotaxonomy data: fatty acid and other related data are given where available. Methods are indicated in the associated reference.
5) Genotypic data: data for DNA-guanosine/cytosine-content and genomic DNA:DNA hybridization are shown where available. Methods are indicated in the associated reference.
6) Phylogenetic data: data for sequences are cross-referenced to the GenBank database. In some cases, aligned sequence datasets are available in FASTA format and can be viewed in the programs BIOEDIT (www.mbio.ncsu.edu/BioEdit/bioedit.html) or CLUSTAL W (www.ebi.ac.uk/clustalw).
7) Other related published references which are useful or relevant to the dataset e.g. related sequences published subsequent to the ASAC study

Tags: 16S RIBOSOMAL RNA GENE, AMD, AMD/AU, ANTARCTICA, CELLULOPHAGA, CEOS, COLWELLIA, CONTINENT > ANTARCTICA, CONTINENT > ANTARCTICA > Ellis Fjord, CONTINENT > ANTARCTICA > Long Fjord, CONTINENT > ANTARCTICA > Prydz Bay, CONTINENT > ANTARCTICA > Vestfold Hills, EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA > CYANOBACTERIA (BLUE-GREEN ALGAE), EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE, EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > BIOMASS DYNAMICS, EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > SECONDARY PRODUCTION, EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON, EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > FRESHWATER ECOSYSTEMS > LAKE/POND, EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > PELAGIC, EARTH SCIENCE > CRYOSPHERE > SEA ICE, EARTH SCIENCE > CRYOSPHERE > SEA ICE > PACK ICE, EARTH SCIENCE > CRYOSPHERE > SEA ICE > POLYNYAS, EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > PIGMENTS > CHLOROPHYLL, EARTH SCIENCE > OCEANS > SEA ICE, EARTH SCIENCE > OCEANS > SEA ICE > ICE TYPES, EARTH SCIENCE > OCEANS > SEA ICE > PACK ICE, FLAME-IONIZATION DETECTOR, FLAVOBACTERIUM, FLUORESCENCE MICROSCOPY, FLUOROMETERS, FSI > Filter Sampling Instrument, GAS CHROMATOGRAPHS, GC-MS > Gas Chromatograph/Mass Spectrometry, GELIDIBACTER, GEOGRAPHIC REGION > POLAR, GLACIECOLA, HALOPHILIC BACTERIA, LABORATORY, PHYLOGENY, POLYUNSATURATED FATTY ACIDS, PSEUDOALTEROMONAS, PSYCHROBACTER, PSYCHROFLEXUS, PSYCHROPHILIC BACTERIA, PSYCHROSERPENS, SEA ICE, SHEWANELLA, SPECTROPHOTOMETERS, TEMPERATURE PROFILERS, VERTICAL LOCATION > SEA SURFACE
Organization: Australian Ocean Data Network